Citrus Sinensis ID: 003926
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 786 | 2.2.26 [Sep-21-2011] | |||||||
| Q8LFN2 | 802 | Probable inactive leucine | yes | no | 0.932 | 0.913 | 0.681 | 0.0 | |
| Q9M9S4 | 728 | Probable LRR receptor-lik | no | no | 0.860 | 0.928 | 0.382 | 1e-131 | |
| C0LGJ9 | 742 | Probable LRR receptor-lik | no | no | 0.863 | 0.915 | 0.384 | 1e-126 | |
| Q9LYN8 | 1192 | Leucine-rich repeat recep | no | no | 0.804 | 0.530 | 0.284 | 2e-65 | |
| Q9FIZ3 | 1252 | LRR receptor-like serine/ | no | no | 0.815 | 0.511 | 0.278 | 2e-64 | |
| C0LGQ5 | 1249 | LRR receptor-like serine/ | no | no | 0.768 | 0.483 | 0.294 | 1e-63 | |
| C0LGW6 | 966 | LRR receptor-like serine/ | no | no | 0.769 | 0.626 | 0.273 | 6e-58 | |
| Q9M0G7 | 1013 | Leucine-rich repeat recep | no | no | 0.781 | 0.606 | 0.277 | 3e-55 | |
| C0LGK4 | 915 | Probable LRR receptor-lik | no | no | 0.856 | 0.735 | 0.274 | 5e-53 | |
| Q9LP24 | 1120 | Probable leucine-rich rep | no | no | 0.750 | 0.526 | 0.282 | 8e-53 |
| >sp|Q8LFN2|Y3037_ARATH Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 OS=Arabidopsis thaliana GN=At3g03770 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 990 bits (2559), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/750 (68%), Positives = 605/750 (80%), Gaps = 17/750 (2%)
Query: 46 PAVLSSWNITTEFCNTEPTSSLTVVCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVK 105
P VL+SWN T+FCN+EP+ SLTVVCYE+S+TQLHI+G+ MLP SFS++SFVTTLVK
Sbjct: 44 PKVLNSWNNYTDFCNSEPSPSLTVVCYEDSVTQLHIIGDNGTHMLPKSFSINSFVTTLVK 103
Query: 106 LPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDEN 165
LPD+KVL VSLGLWG L KI+RLSSLEILN+SSNFL G IP ELS L +LQTLILDEN
Sbjct: 104 LPDVKVLTFVSLGLWGWLPQKINRLSSLEILNVSSNFLFGPIPHELSSLATLQTLILDEN 163
Query: 166 MLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGL 225
M +G +PDW+ SLP LAVLSLR N+ NG+LP S S L LRVLAL+NN F G +PD S L
Sbjct: 164 MFSGELPDWIDSLPSLAVLSLRKNVLNGSLPSSLSSLSGLRVLALANNRFNGALPDLSHL 223
Query: 226 TYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAE-VSSYYQLQRLDLSSNRFV 284
T LQVLDLE N+ GP FP++ KLVT+ILSKNKFRSA+ AE VSS YQLQ LDLS N FV
Sbjct: 224 TNLQVLDLEGNSFGPLFPRLSNKLVTLILSKNKFRSAVSAEEVSSLYQLQHLDLSYNTFV 283
Query: 285 GPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGS- 343
GPFP +L+SLP+ITYLNI+ NKLTG+L +LSCN +L FVD+SSNLLTG LP CL S
Sbjct: 284 GPFPTSLMSLPAITYLNISHNKLTGRLSANLSCNSQLMFVDMSSNLLTGSLPTCLKPSSG 343
Query: 344 KNRVVLYARNCLAAGNENQHPLSFCQNEALAVGILPLQKKQKQVSKAVLALSIIGGIIGG 403
+R V+YA NCLA NE+Q P+SFC NEALAVGILP +++ +VSK +AL + I+G
Sbjct: 344 TSRDVVYASNCLATTNEDQRPVSFCSNEALAVGILP--QRRNKVSKVGIALGVTASILGV 401
Query: 404 ISLVVIAFLLVRRTKSKQTMKKTPTRLIQENASTGYTSKFLSDARYISQTMKLGALGLPA 463
+ L F+++RR +K+T+ K+ RLI+ENAS GYTSK LSDARYISQTMKLG LGLPA
Sbjct: 402 LLLAGALFVVLRRLNAKKTVTKSSPRLIRENASMGYTSKLLSDARYISQTMKLGGLGLPA 461
Query: 464 YRTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHH 523
YRTFSLEELE ATNNF++SAFMGEGSQGQ+YRGRLK+G+FVAIRCLKMKK ST+N MHH
Sbjct: 462 YRTFSLEELEYATNNFESSAFMGEGSQGQIYRGRLKDGSFVAIRCLKMKKSCSTQNLMHH 521
Query: 524 IELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWT 583
IELI+KLRHRHLVS LGHCFECY DDS+VSR+F +FEYVPNG LR+WIS+GH + LTW
Sbjct: 522 IELIAKLRHRHLVSVLGHCFECYLDDSTVSRMFFVFEYVPNGELRTWISDGHMGRLLTWE 581
Query: 584 QRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVG 643
QRIS AIGVAKGIQFLHTGIVPGV+ NNLK+TDILLD NL AK+SSYNLPLL E KVG
Sbjct: 582 QRISVAIGVAKGIQFLHTGIVPGVYDNNLKMTDILLDNNLAAKLSSYNLPLLVEGLGKVG 641
Query: 644 HVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTA 703
V SG P + K E+KIDIYDFG+ILLE+IVGRPL+++ +VD+LK QLQA ++A
Sbjct: 642 QVGSRSG---PKGTPSIKDEDKIDIYDFGVILLELIVGRPLRAKSQVDVLKEQLQASISA 698
Query: 704 DESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAW 763
D+ ARRSMVDP V++AC D+SLKTMME+CVRCLLK+P ERPS+EDVLWNLQFA+QVQ+ W
Sbjct: 699 DDGARRSMVDPTVHRACSDQSLKTMMEICVRCLLKDPLERPSIEDVLWNLQFASQVQEGW 758
Query: 764 ----HSQSSEGSPISP-----PRPSRQHLS 784
+ S+ GSP SP P PSR H++
Sbjct: 759 LQNSNPSSNLGSP-SPAASSLPPPSRLHVT 787
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Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9M9S4|Y1143_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g14390 OS=Arabidopsis thaliana GN=At1g14390 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 468 bits (1205), Expect = e-131, Method: Compositional matrix adjust.
Identities = 292/763 (38%), Positives = 421/763 (55%), Gaps = 87/763 (11%)
Query: 27 QLQSSQAQTLLRIQGLLNNPAVLSSWNITTEFCNTEPTSSLTVVCYEESITQLHIVGNKR 86
QL SS+++TLL IQ L P L SW+ T FC + S ++C+ +T+L + GN R
Sbjct: 28 QLISSESRTLLEIQKHLQYPPTLRSWSNWTNFCYLPSSPSFKILCFNGHVTELTVTGN-R 86
Query: 87 APMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGA 146
LP FS DS T L KL S+L+ L++ S ++G
Sbjct: 87 TVKLPGRFSSDSLFTVLTKL------------------------SNLKTLSLVSLGISGP 122
Query: 147 IPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLR 206
+P ++ + L L+L +N +G +P S L+NLR
Sbjct: 123 LPSQI-----------------------IRLSSSLQSLNLSSNFISGNIPKEISSLKNLR 159
Query: 207 VLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQF-PKVGKKLVTMILSKNKFRSAIPA 265
L L+NN F G VPD GL+ LQ L+L N LGP+ P + L+T+ L N F S IP
Sbjct: 160 SLVLANNLFNGSVPDLRGLSNLQELNLGGNKLGPEVVPSLASNLITISLKNNSFGSKIPE 219
Query: 266 EVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVD 325
++ +LQ LDLSSN+F G P+ LLSLPS+ L++A N L+G L + CN +L +D
Sbjct: 220 QIKKLNKLQSLDLSSNKFTGSIPRFLLSLPSLQNLSLAQNLLSGSLPNSSLCNSKLRILD 279
Query: 326 LSSNLLTGQLPNCLLAGSKNRVVLYARNCLAAGN----ENQHPLSFCQNEA-LAVGILPL 380
+S NLLTG+LP+C + K V+L+ NCL+ + Q P++FC+NEA AV +
Sbjct: 280 VSRNLLTGKLPSCF-SSKKQTVLLFTFNCLSINGSPSAKYQRPVTFCENEAKQAVAAVKS 338
Query: 381 QKKQKQVSKAVLALSIIGGIIGGI-----SLVVIAFLLVRRTKSKQTMKKTPTRLIQE-- 433
K K+ + + + I I S V+ +LVR KS+ + + +
Sbjct: 339 DTKDKERKEEDTGIELGLVIGIIIGVILVSAVLAGLVLVRMRKSRSKEEPLEANNVDQVT 398
Query: 434 ---NASTGYTSKFLSDARYISQTMKLGALGLPAYRTFSLEELEEATNNFDTSAFMGEGSQ 490
N + TSK + D R + QTM+ +GL YR FSLEELEEATNNFD GE
Sbjct: 399 VCSNTTRSTTSKTVPDLRRVPQTMRSAVIGLSPYRVFSLEELEEATNNFDAENLCGE--- 455
Query: 491 GQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550
Q+Y+G L+ G V +RC+K+K+ +ST+N +E++SKLRH HLVS LGHC Y D
Sbjct: 456 -QLYKGCLREGIAVTVRCIKLKQKNSTQNLAQQMEVLSKLRHMHLVSVLGHCIGTYQDHH 514
Query: 551 --SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVF 608
+ S IF++ EY+ NG+LR ++++ + L W QR+S AIGVA+GIQFLHTG+ PG+F
Sbjct: 515 PYAGSTIFIVQEYISNGSLRDYLTDWRKKEVLKWPQRMSIAIGVARGIQFLHTGVAPGIF 574
Query: 609 SNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDI 668
NNL+I ++LLD+ L K+S Y++PL KV G+ P+N EK D+
Sbjct: 575 GNNLEIENVLLDETLTVKLSGYSIPL----PSKV-------GAESPSNED----GEKEDV 619
Query: 669 YDFGLILLEIIVGRPL-KSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKT 727
Y FG+IL++II G+ + + E+ LK QL+ + + S RS+ DP V ESL+T
Sbjct: 620 YQFGVILIQIITGKVIAAASSELGSLKLQLENSLRDEPSVLRSLADPCVRGTYAYESLRT 679
Query: 728 MMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWHSQSSEG 770
+E + CL ++ +RPS+EDV+WNLQ+ QVQ W S + G
Sbjct: 680 TVEFAINCLCEDQRKRPSIEDVVWNLQYTIQVQQGWTSSENLG 722
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGJ9|Y2278_ARATH Probable LRR receptor-like serine/threonine-protein kinase At2g02780 OS=Arabidopsis thaliana GN=At2g02780 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 454 bits (1167), Expect = e-126, Method: Compositional matrix adjust.
Identities = 294/765 (38%), Positives = 424/765 (55%), Gaps = 86/765 (11%)
Query: 27 QLQSSQAQTLLRIQGLLNNPAVLSSWNITTEFCNTEPTSSLTVVCYEESITQLHIVGNKR 86
Q+ SS++QTLL IQ L P VL SW TT FC+ P+ SL ++C +T+L + GN+
Sbjct: 28 QVASSESQTLLEIQKQLQYPQVLQSWTDTTNFCHIRPSPSLRIICLHGHVTELTVTGNRT 87
Query: 87 APMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGA 146
+ LS S T L +L LK L L SLG+ G LS K
Sbjct: 88 SK---LSGSFHKLFTLLTQLSSLKTLSLTSLGISGSLSPK-------------------- 124
Query: 147 IPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLR 206
I+T L P L L+L +N +G +P+ L+NL+
Sbjct: 125 ------IITKLS--------------------PSLESLNLSSNFISGKIPEEIVSLKNLK 158
Query: 207 VLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPA 265
L L +N F+G V D GL+ LQ LDL N LGP+ P + KL T+ L N FRS IP
Sbjct: 159 SLVLRDNMFWGFVSDDLRGLSNLQELDLGGNKLGPEVPSLPSKLTTVSLKNNSFRSKIPE 218
Query: 266 EVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVD 325
++ LQ LDLSSN F G P+ L S+PS+ L++ N L+G L + + ++ +D
Sbjct: 219 QIKKLNNLQSLDLSSNEFTGSIPEFLFSIPSLQILSLDQNLLSGSLPNSSCTSSKIITLD 278
Query: 326 LSSNLLTGQLPNCLLAGS-KNRVVLYARNCLA-AGNEN---QHPLSFCQNEA-LAVGILP 379
+S NLLTG+LP+C + S N+ VL++ NCL+ G N Q PLSFCQN+A A+ + P
Sbjct: 279 VSHNLLTGKLPSCYSSKSFSNQTVLFSFNCLSLIGTPNAKYQRPLSFCQNQASKAIAVEP 338
Query: 380 LQKKQKQVSKAVLALSIIGGIIGGISLVVIAFLLV------RRTKSKQ--------TMKK 425
+ K + + S + +I IIG I L I LLV RR++S+ ++
Sbjct: 339 IPKAKDKDSARIKLGLVILIIIGVIILAAILVLLVLIALKRRRSRSEDDPFEVNNSNNER 398
Query: 426 TPTRLIQENASTGYTSKFLSDARYISQTMKLGALGLPAYRTFSLEELEEATNNFDTSAFM 485
+ + ++T +SK L D+R + QTM+ +GLP YR FSLEELEEATN+FD ++
Sbjct: 399 HASDKVSVCSTTTASSKSLPDSRRVPQTMRSAVIGLPPYRVFSLEELEEATNDFDAASLF 458
Query: 486 GEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFEC 545
E Q+YRG L+ G V +R +K+K+ ++ +E++SKLRH HLVS LGH
Sbjct: 459 CE----QLYRGCLREGIPVTVRVIKLKQKSLPQSLAQQMEVLSKLRHMHLVSVLGHSIAS 514
Query: 546 YFDDSSVS--RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI 603
D + + IF++ EY+ +G+LR +++ + L W QR++ AIGVA+GIQFLH G+
Sbjct: 515 NQDHNQHAGHTIFIVQEYISSGSLRDFLTNCRKKEVLKWPQRMAIAIGVARGIQFLHMGV 574
Query: 604 VPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLE 663
PG+F NNLKI +I+LD+ L KIS Y +PL KVG P + +N R
Sbjct: 575 APGIFGNNLKIENIMLDETLTVKISGYTIPL----PSKVGEERPQAKK-PRSNEDR---- 625
Query: 664 EKIDIYDFGLILLEIIVGRPLKS-RKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLD 722
EK D+Y FG+ILL+II G+ + + E+ LK QL+ + + S S+ DP+V +
Sbjct: 626 EKEDVYQFGVILLQIITGKVVAAGSSEMGSLKLQLENGLRDEPSVLSSLADPSVKGSYAY 685
Query: 723 ESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWHSQS 767
ESL+T +E + CL ++ ++RPS+EDV+WNLQ+ QVQ W S
Sbjct: 686 ESLRTTVEFAINCLCEDQSKRPSIEDVVWNLQYTIQVQQGWRPSS 730
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9LYN8|EXS_ARATH Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1 | Back alignment and function description |
|---|
Score = 251 bits (640), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 198/696 (28%), Positives = 337/696 (48%), Gaps = 64/696 (9%)
Query: 104 VKLPDLKVLRLVSLG---LWGPLSGKISRLSSLEILNMSSNFLNGAIPQ----------- 149
V+L D L + LG L G + KI+ L+ L+ L +S N L+G+IP
Sbjct: 514 VELGDCTSLTTLDLGSNNLQGQIPDKITALAQLQCLVLSYNNLSGSIPSKPSAYFHQIEM 573
Query: 150 -ELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVL 208
+LS L L N L+G +P+ LG +L +SL NN +G +P S S L NL +L
Sbjct: 574 PDLSFLQHHGIFDLSYNRLSGPIPEELGECLVLVEISLSNNHLSGEIPASLSRLTNLTIL 633
Query: 209 ALSNNHFYGEVPDFSGLTY-LQVLDLENNALGPQFPK---VGKKLVTMILSKNKFRSAIP 264
LS N G +P G + LQ L+L NN L P+ + LV + L+KNK +P
Sbjct: 634 DLSGNALTGSIPKEMGNSLKLQGLNLANNQLNGHIPESFGLLGSLVKLNLTKNKLDGPVP 693
Query: 265 AEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFV 324
A + + +L +DLS N G L ++ + L I NK TG++ +L +L ++
Sbjct: 694 ASLGNLKELTHMDLSFNNLSGELSSELSTMEKLVGLYIEQNKFTGEIPSELGNLTQLEYL 753
Query: 325 DLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAAGNENQHPLSFCQNEALAVGILPLQKKQ 384
D+S NLL+G++P + + A+N L + CQ+ + A L
Sbjct: 754 DVSENLLSGEIPTKICGLPNLEFLNLAKNNLRGEVPSD---GVCQDPSKA-----LLSGN 805
Query: 385 KQVSKAVLALSI------------IGGIIGGISLVVIAFL--LVRRTKSKQTMKKTPTRL 430
K++ V+ I G++ G +++V F+ L R +K+ ++
Sbjct: 806 KELCGRVVGSDCKIEGTKLRSAWGIAGLMLGFTIIVFVFVFSLRRWAMTKRVKQRDDPER 865
Query: 431 IQENASTGYTSK---FLSDARYISQ-TMKLGALGLPAYRTFSLEELEEATNNFDTSAFMG 486
++E+ G+ + FLS +R ++ + P + L ++ EAT++F +G
Sbjct: 866 MEESRLKGFVDQNLYFLSGSRSREPLSINIAMFEQPLLKV-RLGDIVEATDHFSKKNIIG 924
Query: 487 EGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECY 546
+G G +Y+ L VA++ L K R FM +E + K++H +LVS LG+C
Sbjct: 925 DGGFGTVYKACLPGEKTVAVKKLSEAKTQGNREFMAEMETLGKVKHPNLVSLLGYC---- 980
Query: 547 FDDSSVSRIFLIFEYVPNGTLRSWI-SEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVP 605
S L++EY+ NG+L W+ ++ + L W++R+ A+G A+G+ FLH G +P
Sbjct: 981 ---SFSEEKLLVYEYMVNGSLDHWLRNQTGMLEVLDWSKRLKIAVGAARGLAFLHHGFIP 1037
Query: 606 GVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEK-VGHVIPYS-GSIDPTNSARGKLE 663
+ ++K ++ILLD + K++ + L L E V VI + G I P +
Sbjct: 1038 HIIHRDIKASNILLDGDFEPKVADFGLARLISACESHVSTVIAGTFGYIPPEYGQSARAT 1097
Query: 664 EKIDIYDFGLILLEIIVGRP-----LKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNK 718
K D+Y FG+ILLE++ G+ K + +L+ +Q + ++ ++DP +
Sbjct: 1098 TKGDVYSFGVILLELVTGKEPTGPDFKESEGGNLVGWAIQKI---NQGKAVDVIDPLLVS 1154
Query: 719 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754
L S ++++ + CL + PA+RP++ DVL L+
Sbjct: 1155 VALKNSQLRLLQIAMLCLAETPAKRPNMLDVLKALK 1190
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Receptor with a serine/threonine-protein kinase activity required for the specification of the correct number of male archesporial initials and for the subsequent specification of tapetal and middle cell layer identities. In seeds, required for enhancing cell size and the rate of embryonic development. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9FIZ3|GSO2_ARATH LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 247 bits (631), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 198/712 (27%), Positives = 329/712 (46%), Gaps = 71/712 (9%)
Query: 58 FCNTEPTSSLTVVCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSL 117
F + + S++ +C S + N +PL L K +L LRL
Sbjct: 560 FSSNKFNGSISPLCGSSSYLSFDVTENGFEGDIPLE---------LGKSTNLDRLRLGKN 610
Query: 118 GLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGS 177
G + ++S L +L++S N L+G IP EL + L + L+ N L+G +P WLG
Sbjct: 611 QFTGRIPRTFGKISELSLLDISRNSLSGIIPVELGLCKKLTHIDLNNNYLSGVIPTWLGK 670
Query: 178 LPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVP-DFSGLTYLQVLDLENN 236
LP+L L L +N F G+LP L N+ L L N G +P + L L L+LE N
Sbjct: 671 LPLLGELKLSSNKFVGSLPTEIFSLTNILTLFLDGNSLNGSIPQEIGNLQALNALNLEEN 730
Query: 237 AL-GPQFPKVGK--KLVTMILSKNKFRSAIPAEVSSYYQLQR-LDLSSNRFVGPFPQALL 292
L GP +GK KL + LS+N IP E+ LQ LDLS N F G P +
Sbjct: 731 QLSGPLPSTIGKLSKLFELRLSRNALTGEIPVEIGQLQDLQSALDLSYNNFTGRIPSTIS 790
Query: 293 SLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYAR 352
+LP + L+++ N+L G++ + LG+++LS N L G+L + V A
Sbjct: 791 TLPKLESLDLSHNQLVGEVPGQIGDMKSLGYLNLSYNNLEGKLKKQFSRWQADAFVGNAG 850
Query: 353 NCLAAGNENQHPLSFCQNEALAVGILPLQKKQKQVS-KAVLALSIIGGIIGGISLVVIAF 411
C PLS C K Q+ +S K V+ +S I + I+L+V+
Sbjct: 851 LC-------GSPLSHCNRAG--------SKNQRSLSPKTVVIISAISS-LAAIALMVLVI 894
Query: 412 LLVRRTKSKQTMKKTPTRLIQENASTGYTSKFLSDARYISQTMKLGALGLPAYRTFSLEE 471
+L + K + S+ + S+ A ++
Sbjct: 895 ILFFKQNHDLFKKVRGGNSAFSSNSSSSQAPLFSNGG--------------AKSDIKWDD 940
Query: 472 LEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMK-KCHSTRNFMHHIELISKL 530
+ EAT+ + +G G G++Y+ LKNG +A++ + K S ++F ++ + +
Sbjct: 941 IMEATHYLNEEFMIGSGGSGKVYKAELKNGETIAVKKILWKDDLMSNKSFNREVKTLGTI 1000
Query: 531 RHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQS------LTWTQ 584
RHRHLV +G+C + LI+EY+ NG++ W+ HA+++ L W
Sbjct: 1001 RHRHLVKLMGYC-----SSKADGLNLLIYEYMANGSVWDWL---HANENTKKKEVLGWET 1052
Query: 585 RISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL-----AENA 639
R+ A+G+A+G+++LH VP + ++K +++LLD N+ A + + L + N
Sbjct: 1053 RLKIALGLAQGVEYLHYDCVPPIVHRDIKSSNVLLDSNIEAHLGDFGLAKILTGNYDTNT 1112
Query: 640 EKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKS--RKEVDLLKNQ 696
E G I P + K EK D+Y G++L+EI+ G+ P ++ +E D+++
Sbjct: 1113 ESNTMFAGSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKMPTEAMFDEETDMVRWV 1172
Query: 697 LQAVVTADES-ARRSMVDPAVNK--ACLDESLKTMMEVCVRCLLKNPAERPS 745
+ T S AR ++D + C +E+ ++E+ ++C P ERPS
Sbjct: 1173 ETVLDTPPGSEAREKLIDSELKSLLPCEEEAAYQVLEIALQCTKSYPQERPS 1224
|
Together with GSO1, receptor-like serine/threonine-kinase required during the development of the epidermal surface in embryos and cotyledons. Involved in the nuclear division phase of megagametogenesis. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGQ5|GSO1_ARATH LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 244 bits (624), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 195/662 (29%), Positives = 321/662 (48%), Gaps = 58/662 (8%)
Query: 108 DLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENML 167
+L LRL L G + + ++ L +L+MSSN L G IP +L + L + L+ N L
Sbjct: 600 NLDRLRLGKNQLTGKIPWTLGKIRELSLLDMSSNALTGTIPLQLVLCKKLTHIDLNNNFL 659
Query: 168 AGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVP-DFSGLT 226
+G +P WLG L L L L +N F +LP L VL+L N G +P + L
Sbjct: 660 SGPIPPWLGKLSQLGELKLSSNQFVESLPTELFNCTKLLVLSLDGNSLNGSIPQEIGNLG 719
Query: 227 YLQVLDLENNALGPQFPK-VGK--KLVTMILSKNKFRSAIPAEVSSYYQLQR-LDLSSNR 282
L VL+L+ N P+ +GK KL + LS+N IP E+ LQ LDLS N
Sbjct: 720 ALNVLNLDKNQFSGSLPQAMGKLSKLYELRLSRNSLTGEIPVEIGQLQDLQSALDLSYNN 779
Query: 283 FVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAG 342
F G P + +L + L+++ N+LTG++ + LG++++S N L G+L
Sbjct: 780 FTGDIPSTIGTLSKLETLDLSHNQLTGEVPGSVGDMKSLGYLNVSFNNLGGKL------- 832
Query: 343 SKNRVVLYARNCLAAGNENQHPLSFCQNEALAVGILPLQKKQKQVSKAVLALSIIGGIIG 402
K A + L PLS C + K+Q +++V+ +S I +
Sbjct: 833 KKQFSRWPADSFLGNTGLCGSPLSRCNR------VRSNNKQQGLSARSVVIISAISALTA 886
Query: 403 -GISLVVIAFLLVRRTKSKQTMKKTPTRLIQENASTGYTSKFLSDARYISQTMKLGALGL 461
G+ ++VIA +R KK + ST YTS S + GA
Sbjct: 887 IGLMILVIALFFKQR---HDFFKKVG------HGSTAYTSSSSSSQATHKPLFRNGA--- 934
Query: 462 PAYRTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMK-KCHSTRNF 520
+ E++ EAT+N +G G G++Y+ L+NG VA++ + K S ++F
Sbjct: 935 -SKSDIRWEDIMEATHNLSEEFMIGSGGSGKVYKAELENGETVAVKKILWKDDLMSNKSF 993
Query: 521 MHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEG-----H 575
++ + ++RHRHLV +G+C S LI+EY+ NG++ W+ E
Sbjct: 994 SREVKTLGRIRHRHLVKLMGYC-----SSKSEGLNLLIYEYMKNGSIWDWLHEDKPVLEK 1048
Query: 576 AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP-L 634
+ L W R+ A+G+A+G+++LH VP + ++K +++LLD N+ A + + L +
Sbjct: 1049 KKKLLDWEARLRIAVGLAQGVEYLHHDCVPPIVHRDIKSSNVLLDSNMEAHLGDFGLAKV 1108
Query: 635 LAENAE-----KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKS-- 686
L EN + Y G I P + K EK D+Y G++L+EI+ G+ P S
Sbjct: 1109 LTENCDTNTDSNTWFACSY-GYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKMPTDSVF 1167
Query: 687 RKEVDLLKNQLQAVVTADESARRSMVDPAVNKACL---DESLKTMMEVCVRCLLKNPAER 743
E+D+++ ++ + SAR ++DP + K L +++ ++E+ ++C +P ER
Sbjct: 1168 GAEMDMVR-WVETHLEVAGSARDKLIDPKL-KPLLPFEEDAACQVLEIALQCTKTSPQER 1225
Query: 744 PS 745
PS
Sbjct: 1226 PS 1227
|
Together with GSO2, receptor-like serine/threonine-kinase required during the development of the epidermal surface in embryos and cotyledons. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGW6|ERL1_ARATH LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 226 bits (575), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 189/690 (27%), Positives = 318/690 (46%), Gaps = 85/690 (12%)
Query: 108 DLKVLRLVSLGLWGP-LSGKISR----LSSLEILNMSSNFLNGAIPQELSILTSLQTLIL 162
++ L++ +L L G L+G+I + +L +L++S N L G IP L L+ L L
Sbjct: 258 NIGFLQVATLSLQGNRLTGRIPEVIGLMQALAVLDLSDNELVGPIPPILGNLSFTGKLYL 317
Query: 163 DENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVP-D 221
NML G +P LG++ L+ L L +N GT+P LE L L L+NN G +P +
Sbjct: 318 HGNMLTGPIPSELGNMSRLSYLQLNDNKLVGTIPPELGKLEQLFELNLANNRLVGPIPSN 377
Query: 222 FSGLTYLQVLDLENNALGPQFPKVGKKLVTMI---LSKNKFRSAIPAEVSSYYQLQRLDL 278
S L ++ N L P + L ++ LS N F+ IP E+ L +LDL
Sbjct: 378 ISSCAALNQFNVHGNLLSGSIPLAFRNLGSLTYLNLSSNNFKGKIPVELGHIINLDKLDL 437
Query: 279 SSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNC 338
S N F G P L L + LN++ N L+G+L + + +D+S NLL+G +P
Sbjct: 438 SGNNFSGSIPLTLGDLEHLLILNLSRNHLSGQLPAEFGNLRSIQMIDVSFNLLSGVIPTE 497
Query: 339 L------------LAGSKNRVVLYARNCLAAGNENQH------------------PLSFC 368
L ++ NC N N P SF
Sbjct: 498 LGQLQNLNSLILNNNKLHGKIPDQLTNCFTLVNLNVSFNNLSGIVPPMKNFSRFAPASFV 557
Query: 369 QNEALA---VGIL--PLQKKQKQVSKAVLALSIIGGIIGGISLVVIAFLLVRRTKSKQTM 423
N L VG + PL K + A++ + ++G I+L+ + FL V ++ ++ +
Sbjct: 558 GNPYLCGNWVGSICGPLPKSRVFSRGALICI-----VLGVITLLCMIFLAVYKSMQQKKI 612
Query: 424 KKTPTRLIQENASTGYTSKFLSDARYISQTMKLGALGLPAYRTFSLEELEEATNNFDTSA 483
+ ++ + G T + + M + A TF +++ T N +
Sbjct: 613 LQGSSK-----QAEGLT-------KLVILHMDM------AIHTF--DDIMRVTENLNEKF 652
Query: 484 FMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCF 543
+G G+ +Y+ LK+ +AI+ L + H+ R F +E I +RHR++VS G+
Sbjct: 653 IIGYGASSTVYKCALKSSRPIAIKRLYNQYPHNLREFETELETIGSIRHRNIVSLHGYAL 712
Query: 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI 603
S + L ++Y+ NG+L + L W R+ A+G A+G+ +LH
Sbjct: 713 -------SPTGNLLFYDYMENGSLWDLLHGSLKKVKLDWETRLKIAVGAAQGLAYLHHDC 765
Query: 604 VPGVFSNNLKITDILLDQNLVAKISSYNLP--LLAENAEKVGHVIPYSGSIDPTNSARGK 661
P + ++K ++ILLD+N A +S + + + A +V+ G IDP + +
Sbjct: 766 TPRIIHRDIKSSNILLDENFEAHLSDFGIAKSIPASKTHASTYVLGTIGYIDPEYARTSR 825
Query: 662 LEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVT-ADESARRSMVDPAVNKAC 720
+ EK DIY FG++LLE++ G +K VD N Q +++ AD++ VDP V C
Sbjct: 826 INEKSDIYSFGIVLLELLTG-----KKAVDNEANLHQLILSKADDNTVMEAVDPEVTVTC 880
Query: 721 LD-ESLKTMMEVCVRCLLKNPAERPSVEDV 749
+D ++ ++ + C +NP ERP++ +V
Sbjct: 881 MDLGHIRKTFQLALLCTKRNPLERPTMLEV 910
|
Receptor kinase that regulates inflorescence architecture and organ shape as well as stomatal patterning, including density and clustering, together with ER and ERL2. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9M0G7|PXL2_ARATH Leucine-rich repeat receptor-like protein kinase PXL2 OS=Arabidopsis thaliana GN=PXL2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 217 bits (552), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 187/674 (27%), Positives = 320/674 (47%), Gaps = 60/674 (8%)
Query: 106 LPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDEN 165
L L+VL L + L G L + + S L+ L++SSN +G IP L +L LIL N
Sbjct: 331 LAQLQVLELWNNTLSGELPSDLGKNSPLQWLDVSSNSFSGEIPSTLCNKGNLTKLILFNN 390
Query: 166 MLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVP-DFSG 224
G++P L + L + ++NN+ NG++P F LE L+ L L+ N G +P D S
Sbjct: 391 TFTGQIPATLSTCQSLVRVRMQNNLLNGSIPIGFGKLEKLQRLELAGNRLSGGIPGDISD 450
Query: 225 LTYLQVLDLENNALGPQFPKVG---KKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSN 281
L +D N + P L +++ N +P + L LDLSSN
Sbjct: 451 SVSLSFIDFSRNQIRSSLPSTILSIHNLQAFLVADNFISGEVPDQFQDCPSLSNLDLSSN 510
Query: 282 RFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLA 341
G P ++ S + LN+ +N LTG++ ++ L +DLS+N LTG LP +
Sbjct: 511 TLTGTIPSSIASCEKLVSLNLRNNNLTGEIPRQITTMSALAVLDLSNNSLTGVLPESIGT 570
Query: 342 GSKNRVVLYARNCLAAGN------ENQHPLSFCQNEALAVGILPLQKKQKQVSKAVLAL- 394
++ + N L + +P N L G+LP K ++ + + +L
Sbjct: 571 SPALELLNVSYNKLTGPVPINGFLKTINPDDLRGNSGLCGGVLPPCSKFQRATSSHSSLH 630
Query: 395 --SIIGGIIGGISLVVIAFLLVRRTKSKQTMKKTPTRLIQENASTGYTS-KFLSDARYIS 451
I+ G + GI+ V+ +L T++ L ++ S G+ + S +
Sbjct: 631 GKRIVAGWLIGIASVLALGILTIVTRT----------LYKKWYSNGFCGDETASKGEWPW 680
Query: 452 QTMKLGALGLPAYRTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLK 510
+ M LG A + S +G G+ G +Y+ + ++ T +A++ L
Sbjct: 681 RLMAFHRLGFTASDILAC---------IKESNMIGMGATGIVYKAEMSRSSTVLAVKKLW 731
Query: 511 MKKCH----STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGT 566
+T +F+ + L+ KLRHR++V LG ++D + + +++E++ NG
Sbjct: 732 RSAADIEDGTTGDFVGEVNLLGKLRHRNIVRLLGF----LYNDKN---MMIVYEFMLNGN 784
Query: 567 LRSWISEGHAHQSL--TWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV 624
L I +A L W R + A+GVA G+ +LH P V ++K +ILLD NL
Sbjct: 785 LGDAIHGKNAAGRLLVDWVSRYNIALGVAHGLAYLHHDCHPPVIHRDIKSNNILLDANLD 844
Query: 625 AKISSYNLP-LLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVG-R 682
A+I+ + L ++A E V V G I P K++EKIDIY +G++LLE++ G R
Sbjct: 845 ARIADFGLARMMARKKETVSMVAGSYGYIAPEYGYTLKVDEKIDIYSYGVVLLELLTGRR 904
Query: 683 PL-----KSRKEVDLLKNQLQAVVTADESARRSMVDPAV-NKACLDESLKTMMEVCVRCL 736
PL +S V+ ++ +++ ++ +E+ +DP V N + E + ++++ + C
Sbjct: 905 PLEPEFGESVDIVEWVRRKIRDNISLEEA-----LDPNVGNCRYVQEEMLLVLQIALLCT 959
Query: 737 LKNPAERPSVEDVL 750
K P +RPS+ DV+
Sbjct: 960 TKLPKDRPSMRDVI 973
|
Involved in the regulation of procambium maintenance and polarity during vascular-tissue development. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGK4|Y2165_ARATH Probable LRR receptor-like serine/threonine-protein kinase At2g16250 OS=Arabidopsis thaliana GN=At2g16250 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 209 bits (533), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 216/788 (27%), Positives = 345/788 (43%), Gaps = 115/788 (14%)
Query: 50 SSWNITTEFCNTEPTSSLTVVCYEESITQLHIVGNKRAPMLPLS--FSMDSFVTTLVKLP 107
+ W I + C + C SI ++I G +R + L+ FS+D L L
Sbjct: 52 TDWPIKGDPC----VDWRGIQCENGSIIGINISGFRRTRIGKLNPQFSVD----PLRNLT 103
Query: 108 DLKVLRLVSLGLWGPLSGKIS-RLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENM 166
L L L G + L +LE+L++SS +NG +P L LTSL+TL L +N
Sbjct: 104 RLSYFNASGLALPGTIPEWFGVSLLALEVLDLSSCSVNGVVPFTLGNLTSLRTLNLSQNS 163
Query: 167 LAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVP------ 220
L VP LG L L+ L L N F G LP SFS L+NL L +S+N+ G +P
Sbjct: 164 LTSLVPSSLGQLLNLSQLDLSRNSFTGVLPQSFSSLKNLLTLDVSSNYLTGPIPPGLGAL 223
Query: 221 -------------------DFSGLTYLQVLDLENNALGPQFPKVGKKLVT---MILSKNK 258
+ L L DL N+L P+ +KL M + N
Sbjct: 224 SKLIHLNFSSNSFSSPIPSELGDLVNLVDFDLSINSLSGSVPQELRKLSKLQLMAIGDNL 283
Query: 259 FRSAIPAEV-SSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKL----FD 313
+P ++ S+ QLQ L L N F G P SLP + L+IA N TG L +D
Sbjct: 284 LSGTLPVDLFSAESQLQTLVLRENGFSGSLPDVCWSLPKLRILDIAKNNFTGLLPYSSYD 343
Query: 314 --------DLSCNPELG----------FVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCL 355
D+S N G +DLS N G+LP+ + + V NCL
Sbjct: 344 SDQIAEMVDISSNTFYGELTPILRRFRIMDLSGNYFEGKLPDYVTGEN----VSVTSNCL 399
Query: 356 AAGNENQHPLSFCQNEALAVGI------LP--LQKKQKQVS-----KAVLALSIIGGIIG 402
Q P + C + G+ P Q K S + V+ L+ +GG +
Sbjct: 400 -RNERRQKPSAICAAFYKSRGLDFDDFGRPNLTQPTSKNASSGISRRTVIILAAVGGGVA 458
Query: 403 GISLVV---IAFLLVRRTKSKQTMKKTPTRLIQENASTGYTSKFLSDARYISQTMKLGAL 459
I L V I +L R + + + R ++ K +QT L L
Sbjct: 459 FILLFVILPIILVLCMRHRRRAAQRGNNDRPKPAGEASQQPPKG-------AQTFDLSRL 511
Query: 460 GLPAYRTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRN 519
G FS E+L +AT F+ + + G G ++RG L+NG V I+ + +++ S
Sbjct: 512 G----NAFSYEQLLQATEEFNDANLIKRGHSGNLFRGFLENGIPVVIKKIDVREGKS-EG 566
Query: 520 FMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI-----SEG 574
++ +EL SK H+ LV LGHC E + S+ FL+++++ +G L S + +EG
Sbjct: 567 YISELELFSKAGHQRLVPFLGHCLE------NESQKFLVYKFMRHGDLASSLFRKSENEG 620
Query: 575 HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634
+SL W R+ A+G A+G+ +LH P + +++ + ILLD ++ S +
Sbjct: 621 DGLKSLDWITRLKIALGAAEGLSYLHHECSPPLVHRDVQASSILLDDKFEVRLGSLSEAY 680
Query: 635 LAENA--EKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL 692
+A ++ ++ S +P++S D+Y FG +LLE++ G+ S + L
Sbjct: 681 AQGDAYQSRISRLLRLPQSSEPSSSGVTNAICSYDVYCFGKVLLELVTGKLGISSPDNAL 740
Query: 693 LKNQLQA----VVTADESARRSMVDPA--VNKACLDESLKTMMEVCVRCLLKNPAERPSV 746
K ++ + T ++ ++DP+ V++ L+E + M + CL P RP +
Sbjct: 741 AKEYMEEALPYISTNEKELVTKILDPSLMVDEDLLEE-VWAMAIIAKSCLNPKPTRRPLM 799
Query: 747 EDVLWNLQ 754
++ L+
Sbjct: 800 RHIVNALE 807
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9LP24|Y1571_ARATH Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 209 bits (532), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 189/670 (28%), Positives = 304/670 (45%), Gaps = 80/670 (11%)
Query: 86 RAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNG 145
RA L F+ D F + PDL + G +S + L L MS+N + G
Sbjct: 514 RARFLGNKFTGDIFEAFGI-YPDLNFIDFSHNKFHGEISSNWEKSPKLGALIMSNNNITG 572
Query: 146 AIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENL 205
AIP E+ +T L L L N L G +P+ +G+L L+ L L N +G +P S+L NL
Sbjct: 573 AIPTEIWNMTQLVELDLSTNNLFGELPEAIGNLTNLSRLRLNGNQLSGRVPAGLSFLTNL 632
Query: 206 RVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPA 265
L LS+N+F E+P T+ L KL M LS+NKF +IP
Sbjct: 633 ESLDLSSNNFSSEIPQ----TFDSFL----------------KLHDMNLSRNKFDGSIP- 671
Query: 266 EVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVD 325
+S QL +LDLS N+ G P L SL S+ L+++ N L+G + L VD
Sbjct: 672 RLSKLTQLTQLDLSHNQLDGEIPSQLSSLQSLDKLDLSHNNLSGLIPTTFEGMIALTNVD 731
Query: 326 LSSNLLTGQLPNCLLAGSKNRVVLYARNCLAAGNENQHPLSFCQNEALAVGILPLQKKQK 385
+S+N L G LP+ L N N + L C+ L+K +K
Sbjct: 732 ISNNKLEGPLPDTPTFRKATADAL-EENIGLCSNIPKQRLKPCRE---------LKKPKK 781
Query: 386 QVSKAVLALSIIGGIIGGISLVVIAFLLVRRTKSKQTMKKTPTRLIQENASTGYTSKFLS 445
+ V L I G++ +S+ F R + Q + T EN S F
Sbjct: 782 NGNLVVWILVPILGVLVILSICANTFTYCIRKRKLQNGRNTDPE-TGENMSI-----FSV 835
Query: 446 DARYISQTMKLGALGLPAYRTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVA 505
D + F +++ E+TN FD + +G G ++YR L++ T +A
Sbjct: 836 DGK------------------FKYQDIIESTNEFDPTHLIGTGGYSKVYRANLQD-TIIA 876
Query: 506 IRCL------KMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIF 559
++ L ++ K + F++ ++ ++++RHR++V G C S FLI+
Sbjct: 877 VKRLHDTIDEEISKPVVKQEFLNEVKALTEIRHRNVVKLFGFC-------SHRRHTFLIY 929
Query: 560 EYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL 619
EY+ G+L ++ + LTWT+RI+ GVA + ++H + + ++ +ILL
Sbjct: 930 EYMEKGSLNKLLANDEEAKRLTWTKRINVVKGVAHALSYMHHDRITPIVHRDISSGNILL 989
Query: 620 DQNLVAKISSYNLP-LLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEI 678
D + AKIS + LL ++ V G + P + K+ EK D+Y FG+++LE+
Sbjct: 990 DNDYTAKISDFGTAKLLKTDSSNWSAVAGTYGYVAPEFAYTMKVTEKCDVYSFGVLILEL 1049
Query: 679 IVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAV--NKACLDESLKTMMEVCVRCL 736
I+G + DL+ + + + + RS+ D V + E L M+E+ + CL
Sbjct: 1050 IIG-----KHPGDLVSSLSSS--PGEALSLRSISDERVLEPRGQNREKLLKMVEMALLCL 1102
Query: 737 LKNPAERPSV 746
NP RP++
Sbjct: 1103 QANPESRPTM 1112
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 786 | ||||||
| 255569464 | 782 | leucine-rich repeat protein, putative [R | 0.991 | 0.996 | 0.719 | 0.0 | |
| 224144836 | 774 | predicted protein [Populus trichocarpa] | 0.952 | 0.967 | 0.737 | 0.0 | |
| 225439195 | 786 | PREDICTED: probable inactive leucine-ric | 0.996 | 0.996 | 0.718 | 0.0 | |
| 224123880 | 784 | predicted protein [Populus trichocarpa] | 0.994 | 0.997 | 0.717 | 0.0 | |
| 357508805 | 774 | hypothetical protein MTR_7g086420 [Medic | 0.977 | 0.992 | 0.679 | 0.0 | |
| 147854936 | 746 | hypothetical protein VITISV_020032 [Viti | 0.945 | 0.995 | 0.681 | 0.0 | |
| 449523778 | 781 | PREDICTED: probable inactive leucine-ric | 0.984 | 0.991 | 0.670 | 0.0 | |
| 449462762 | 781 | PREDICTED: probable inactive leucine-ric | 0.984 | 0.991 | 0.669 | 0.0 | |
| 356571765 | 781 | PREDICTED: probable inactive leucine-ric | 0.947 | 0.953 | 0.682 | 0.0 | |
| 356560829 | 782 | PREDICTED: probable inactive leucine-ric | 0.970 | 0.975 | 0.665 | 0.0 |
| >gi|255569464|ref|XP_002525699.1| leucine-rich repeat protein, putative [Ricinus communis] gi|223534999|gb|EEF36682.1| leucine-rich repeat protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1140 bits (2950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 562/781 (71%), Positives = 660/781 (84%), Gaps = 2/781 (0%)
Query: 4 ASRFSQCTLLVLAYILLQVNHSEQLQSSQAQTLLRIQGLLNNPAVLSSWNITTEFCNTEP 63
A F +LV +L+ VNHSEQLQSSQ +TLLRIQ +LN P++L+SWN TT+FCNT+P
Sbjct: 2 AKSFQYSAILVFITVLVSVNHSEQLQSSQGETLLRIQRILNYPSILNSWNSTTDFCNTDP 61
Query: 64 TSSLTVVCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPL 123
SLTVVCYE+SITQLHI+GNK AP+LP +FS++SFVTTLV LP+LKVL LVSLGLWGPL
Sbjct: 62 NPSLTVVCYEDSITQLHIIGNKGAPLLPRNFSIESFVTTLVSLPNLKVLTLVSLGLWGPL 121
Query: 124 SGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAV 183
GKI+RL SLE+LNMSSNFL AIP++LS L SLQTL+LD+NM++G +P+WL S P+L V
Sbjct: 122 PGKIARLPSLEMLNMSSNFLYDAIPEDLSSLGSLQTLVLDDNMVSGELPNWLDSFPLLTV 181
Query: 184 LSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFP 243
LSL+ NMFNG+LP+S S L NLRVLALS+N+FYGEVPD S LT LQVLDLE+NA GPQFP
Sbjct: 182 LSLKKNMFNGSLPNSLSNLANLRVLALSHNYFYGEVPDLSSLTNLQVLDLEDNAFGPQFP 241
Query: 244 KVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIA 303
++G KLVT+ LSKNKFR IPAEVSSYY L++LDLS N+FVGPFP LLSL SITY+N+A
Sbjct: 242 QLGNKLVTLTLSKNKFRDGIPAEVSSYYHLRQLDLSKNKFVGPFPPLLLSLLSITYINVA 301
Query: 304 DNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAAGNENQH 363
DNKLTG LF++ SC+ +L FVDLSSNL+TG LP CL + S+ +V LYA NCLA +NQ+
Sbjct: 302 DNKLTGMLFENQSCSADLEFVDLSSNLITGHLPKCLQSDSREKV-LYAGNCLAIEKQNQN 360
Query: 364 PLSFCQNEALAVGILPLQKKQKQVSKAVLALSIIGGIIGGISLVVIAFLLVRRTKSKQTM 423
P+SFC+NEALAVGIL KK + SK V+ L +IGG+ GGI+ V + FL+VR+ +++ +
Sbjct: 361 PISFCRNEALAVGILTQHKKTRHASK-VITLGVIGGVAGGIAAVGLIFLIVRKVYARKAI 419
Query: 424 KKTPTRLIQENASTGYTSKFLSDARYISQTMKLGALGLPAYRTFSLEELEEATNNFDTSA 483
K+ TRLI ENASTGY SK LSDARY+SQTMKLGALG+PAYRTFSLEELEEATNNFDTSA
Sbjct: 420 KRPTTRLIAENASTGYPSKLLSDARYVSQTMKLGALGIPAYRTFSLEELEEATNNFDTSA 479
Query: 484 FMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCF 543
F+GEGSQGQMYRGRLKNG++VAIRCLKMK+ +ST+NFMHHIELISKLRHRHL+SALGHCF
Sbjct: 480 FIGEGSQGQMYRGRLKNGSYVAIRCLKMKRSYSTQNFMHHIELISKLRHRHLISALGHCF 539
Query: 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI 603
ECY DDSSVSRIFL+FEYVPNGTLRSWISE + Q+L W QRI+AAIGVAKGIQFLHTGI
Sbjct: 540 ECYLDDSSVSRIFLVFEYVPNGTLRSWISEKRSRQTLNWAQRIAAAIGVAKGIQFLHTGI 599
Query: 604 VPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLE 663
+PGV+S NLKITD+LLDQNLVAKI SYNLPLLAENA K+GH + GS DP AR E
Sbjct: 600 LPGVYSKNLKITDVLLDQNLVAKICSYNLPLLAENAGKIGHGVSSGGSTDPITVARKDEE 659
Query: 664 EKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDE 723
EK+D+YDFG+ILLEIIVG PL S EVD+LK++LQA + +DE+ARRSMVDPAV + C D+
Sbjct: 660 EKVDVYDFGVILLEIIVGSPLNSMNEVDVLKDRLQASIISDEAARRSMVDPAVKRKCSDQ 719
Query: 724 SLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWHSQSSEGSPISPPRPSRQHL 783
SLKTMMEVCVRCLLKNPA+RPSVEDVLWNLQFAAQVQD W SSEGSPISP P HL
Sbjct: 720 SLKTMMEVCVRCLLKNPADRPSVEDVLWNLQFAAQVQDGWRGDSSEGSPISPSNPPDLHL 779
Query: 784 S 784
+
Sbjct: 780 T 780
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224144836|ref|XP_002325432.1| predicted protein [Populus trichocarpa] gi|222862307|gb|EEE99813.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1137 bits (2940), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/753 (73%), Positives = 649/753 (86%), Gaps = 4/753 (0%)
Query: 22 VNHSEQLQSSQAQTLLRIQGLLNNPAVLSSWNITTEFCNTEPTSSLTVVCYEESITQLHI 81
++ SEQLQSSQ +TLLRIQ LLN P+ LSSWN TT+FCNTEP +S+TVVCYE SITQLHI
Sbjct: 20 ISGSEQLQSSQGETLLRIQRLLNYPSALSSWNSTTDFCNTEPNASVTVVCYENSITQLHI 79
Query: 82 VGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSN 141
+GNK P+LP +FS+DSFVTTLV LP+LKVL LVSLGLWGPL GKI+RLSSLEILN+SSN
Sbjct: 80 IGNKGTPLLPRNFSIDSFVTTLVGLPNLKVLTLVSLGLWGPLPGKIARLSSLEILNVSSN 139
Query: 142 FLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSY 201
FL A+PQE+S L +LQ+L+LD+NM A VP+W+GSLP+L+VLSL+ NM NG+LPDS S
Sbjct: 140 FLYDAVPQEISSLAALQSLVLDDNMFADEVPNWIGSLPVLSVLSLKKNMLNGSLPDSLSN 199
Query: 202 LENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRS 261
L+NLRVL LS+N+F GEVPD S LT LQVLDLE+NALGPQFP +G KL++++LSKNKFR
Sbjct: 200 LDNLRVLVLSHNYFRGEVPDLSSLTNLQVLDLEDNALGPQFPLLGNKLISLVLSKNKFRD 259
Query: 262 AIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPEL 321
+PAEV+SYYQLQRLDLSSN+FVGPFPQ+LLSLPS+TYLN+ADNK TG LF++ SC+ +L
Sbjct: 260 GLPAEVTSYYQLQRLDLSSNKFVGPFPQSLLSLPSVTYLNVADNKFTGMLFENQSCSADL 319
Query: 322 GFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAAGNENQHPLSFCQNEALAVGILPLQ 381
FVDLSSNL+TGQLPNCLL SK R VLYA NCLA G+ENQHP+S C+NEALAVGILP Q
Sbjct: 320 EFVDLSSNLMTGQLPNCLLQDSK-RKVLYAANCLATGDENQHPISLCRNEALAVGILP-Q 377
Query: 382 KKQKQVSKAVLALSIIGGIIGGISLVVIAFLLVRRTKSKQTMKKTPTRLIQENASTGYTS 441
+K+++ SK +A +IGGI+GGI+LV + +L VR+ KS++T+K+ TRLI ENASTGY S
Sbjct: 378 RKKRKASKETIAFGVIGGIVGGIALVGLIYLAVRKVKSRKTIKRPNTRLIAENASTGYPS 437
Query: 442 KFLSDARYISQTMKLGALGLPAYRTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNG 501
L DARYISQTMKLGALGLP YRTFSLEE+EEATNNFDTSAFMGEGSQGQMYRGRLK+G
Sbjct: 438 NLLPDARYISQTMKLGALGLPPYRTFSLEEVEEATNNFDTSAFMGEGSQGQMYRGRLKDG 497
Query: 502 TFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEY 561
+FVAIRCLKMK+ HST+NFMHHIELISKLRHRHLVSALGHCFECY DDSSVSRIFL+FEY
Sbjct: 498 SFVAIRCLKMKRSHSTQNFMHHIELISKLRHRHLVSALGHCFECYLDDSSVSRIFLVFEY 557
Query: 562 VPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ 621
VPNGTLRSWIS GHA Q L WT RI+AAIGVAKGIQFLHTGIVPGV+SNNLKITD+LLDQ
Sbjct: 558 VPNGTLRSWISGGHAWQKLQWTHRIAAAIGVAKGIQFLHTGIVPGVYSNNLKITDVLLDQ 617
Query: 622 NLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVG 681
NL+AKISSYNLPLLAEN V H S D + SAR ++K+D+YDFGLILLEIIVG
Sbjct: 618 NLIAKISSYNLPLLAENKGMVVHGTSSGASKDLSTSARINQDQKVDVYDFGLILLEIIVG 677
Query: 682 RPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA 741
R L S+ EV +LK+QLQA +T+D++AR S+VDP V ++C D+SLKTMME+CV CLLKNPA
Sbjct: 678 RSLTSKNEVRVLKDQLQASITSDDTARSSIVDPVVRRSCSDQSLKTMMEICVSCLLKNPA 737
Query: 742 ERPSVEDVLWNLQFAAQVQDAWH--SQSSEGSP 772
+RPSVED+LWNLQ+AAQVQD W SQSS P
Sbjct: 738 DRPSVEDILWNLQYAAQVQDPWRGDSQSSSTKP 770
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225439195|ref|XP_002269509.1| PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 [Vitis vinifera] gi|296085894|emb|CBI31218.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1128 bits (2917), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 564/785 (71%), Positives = 652/785 (83%), Gaps = 2/785 (0%)
Query: 4 ASRFSQCTLLVLAYILLQVNHSEQLQSSQAQTLLRIQGLLNNPAVLSSWNITTEFCNTEP 63
A F LLVL IL + SEQL SSQAQTL+RIQG+LN PA+LSSWN T+FC+TEP
Sbjct: 2 AKGFCHWALLVLVLILGSIRPSEQLPSSQAQTLIRIQGILNFPAILSSWNNNTDFCDTEP 61
Query: 64 TSSLTVVCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPL 123
+SSLTVVCYEESITQLHI+G+K P LP +FS+DSF+TTLVKLP LKVL LVSLGLWGP+
Sbjct: 62 SSSLTVVCYEESITQLHIIGHKGVPPLPRNFSIDSFITTLVKLPSLKVLTLVSLGLWGPM 121
Query: 124 SGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAV 183
KI+RLSSLEILN+SSN+ G IP+E++ LTSLQTLILD+NM G + DWL LP+LAV
Sbjct: 122 PSKIARLSSLEILNISSNYFYGTIPEEIAYLTSLQTLILDDNMFIGELSDWLSLLPVLAV 181
Query: 184 LSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFP 243
LSL+ N FNG+LP S LENLR+L LS+N FYGEVPD S L LQVLDLE+NALGPQFP
Sbjct: 182 LSLKKNSFNGSLPSSLGSLENLRILTLSHNRFYGEVPDLSSLDNLQVLDLEDNALGPQFP 241
Query: 244 KVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIA 303
++G KLVT++L KN+F S IP EVSSYYQL+RLD+S NRF GPFP +LL+LPS+TYLNIA
Sbjct: 242 RLGTKLVTLVLKKNRFSSGIPVEVSSYYQLERLDISYNRFAGPFPPSLLALPSVTYLNIA 301
Query: 304 DNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAAGNENQH 363
NK TG LF SCN L FVDLSSNLLTG LPNCL + SK RVVLY RNCLA G +NQH
Sbjct: 302 GNKFTGMLFGYQSCNAGLEFVDLSSNLLTGNLPNCLKSDSKKRVVLYGRNCLATGEQNQH 361
Query: 364 PLSFCQNEALAVGILPLQKKQKQVSKAVLALSIIGGIIGGISLVVIAFLLVRRTKSKQTM 423
P SFC+NEALAVGI+P +KKQK SKAVLAL IGGI+GGI+L + FL+VRR +K+
Sbjct: 362 PFSFCRNEALAVGIIPHRKKQKGASKAVLALGTIGGILGGIALFCLVFLVVRRVNAKKAT 421
Query: 424 KKTPTRLIQENASTGYTSKFLSDARYISQTMKLGALGLPAYRTFSLEELEEATNNFDTSA 483
K PT+LI ENAST Y+SK SDARY+SQTM LGALGLPAYRTFSLEELEEATNNFDTS
Sbjct: 422 KTPPTKLIAENASTVYSSKLFSDARYVSQTMNLGALGLPAYRTFSLEELEEATNNFDTST 481
Query: 484 FMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCF 543
FMGEGSQGQMYRG+LK+G+ VAIRCLKMKK HST+NFMHHIELI KLRHRHLVS+LGHCF
Sbjct: 482 FMGEGSQGQMYRGKLKDGSLVAIRCLKMKKSHSTQNFMHHIELILKLRHRHLVSSLGHCF 541
Query: 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI 603
ECY DD+SVSRIFLIFEYVPNGTLRSWISEG + Q+L+WTQRI+AAIGVAKGI+FLHTGI
Sbjct: 542 ECYLDDASVSRIFLIFEYVPNGTLRSWISEGRSRQTLSWTQRIAAAIGVAKGIEFLHTGI 601
Query: 604 VPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLE 663
+PGV+SNNLKITDILLDQNLVAKISSYNLPLLAEN KV I GS + + +AR + E
Sbjct: 602 LPGVYSNNLKITDILLDQNLVAKISSYNLPLLAENMGKVSSGISSGGSKEFSVNARVQHE 661
Query: 664 EKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDE 723
+KIDIYDFG+ILLE+I+GRP S EVD+++N LQA VTAD+++RR+MVD AV++ C DE
Sbjct: 662 DKIDIYDFGVILLELIMGRPFNSTNEVDVIRNWLQACVTADDASRRNMVDAAVHRTCSDE 721
Query: 724 SLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWH--SQSSEGSPISPPRPSRQ 781
SLKTMME+C+RCL K+PAERPS+EDVLWNLQFAAQV+DA S SS+GSP P P R
Sbjct: 722 SLKTMMEICIRCLHKDPAERPSIEDVLWNLQFAAQVEDALRGDSDSSDGSPAFPSLPPRL 781
Query: 782 HLSFH 786
L+ H
Sbjct: 782 RLNIH 786
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224123880|ref|XP_002319187.1| predicted protein [Populus trichocarpa] gi|222857563|gb|EEE95110.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1112 bits (2877), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/788 (71%), Positives = 669/788 (84%), Gaps = 6/788 (0%)
Query: 1 MARASRFSQCTLLVLAYILLQVNHSEQLQSSQAQTLLRIQGLLNNPAVLSSWNITTEFCN 60
MA+A R+S +L+ ++L ++ SEQLQSSQ +TLLRIQ LLN P+ LSSWN + +FCN
Sbjct: 1 MAKAFRYS--AILLCVVLVLLISGSEQLQSSQGETLLRIQRLLNYPSSLSSWNSSIDFCN 58
Query: 61 TEPTSSLTVVCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLW 120
+EP +S+TV CYE+SITQLHIVGNK P+LP +FS+DSFVTT+V LP LKVL LVSLGLW
Sbjct: 59 SEPNASVTVACYEKSITQLHIVGNKGTPLLPGNFSIDSFVTTVVGLPTLKVLTLVSLGLW 118
Query: 121 GPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPI 180
GPL GKI+RLSSLEILNMSSNFL AIPQELS L+ LQ+L LD+NM AG+VP+W+GSL +
Sbjct: 119 GPLPGKIARLSSLEILNMSSNFLYDAIPQELSSLSGLQSLGLDDNMFAGKVPNWIGSLQV 178
Query: 181 LAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGP 240
L+VLSLR NM NG+LPDS S LENLRVLAL++N+F GEVPD S LT LQVLDLE+NA GP
Sbjct: 179 LSVLSLRKNMLNGSLPDSLSTLENLRVLALAHNYFKGEVPDLSSLTNLQVLDLEDNAFGP 238
Query: 241 QFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYL 300
QFP++G KLV+++LS+NKFR +PAEV+SYYQLQRLDLS+N FVGPFPQ+LLSLPS+TYL
Sbjct: 239 QFPQLGNKLVSLVLSRNKFRDGLPAEVTSYYQLQRLDLSNNTFVGPFPQSLLSLPSVTYL 298
Query: 301 NIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAAGNE 360
NIADNK TG LF++ SC+ +L FVDLSSNL+TG +PNCLL SK + LYA NCLA G++
Sbjct: 299 NIADNKFTGMLFENQSCSADLEFVDLSSNLMTGHMPNCLLQDSKKKA-LYAGNCLATGDQ 357
Query: 361 NQHPLSFCQNEALAVGILPLQKKQKQVSKAVLALSIIGGIIGGISLVVIAFLLVRRTKSK 420
+QHP+S C+NEALAVGILP QKK+K SKA++A+S+IGGI+GGI+LV + FL VR+ KS
Sbjct: 358 DQHPISICRNEALAVGILPQQKKRKP-SKAIIAISVIGGIVGGIALVGLIFLAVRKVKSG 416
Query: 421 QTMKKTPTRLIQENASTGYTSKFLSDARYISQTMKLGALGLPAYRTFSLEELEEATNNFD 480
+T++K+ RLI ENASTGY +K LSDARYISQTMKLGALGLPAYRTFSLEELEEATNNFD
Sbjct: 417 KTIQKSTIRLIAENASTGYPTKLLSDARYISQTMKLGALGLPAYRTFSLEELEEATNNFD 476
Query: 481 TSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALG 540
TSAFMGEGSQGQ+YRGRLK+G+FV IRCLKMK+ H T NFMHHIELISKLRHRHLVSALG
Sbjct: 477 TSAFMGEGSQGQIYRGRLKDGSFVVIRCLKMKRSHGTHNFMHHIELISKLRHRHLVSALG 536
Query: 541 HCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLH 600
H FE Y DDSSVSRIFL+FEYVPNGTLRSWIS GHA Q + WT RI+AAIGVAKGIQFLH
Sbjct: 537 HGFEYYLDDSSVSRIFLVFEYVPNGTLRSWISGGHARQKIHWTHRIAAAIGVAKGIQFLH 596
Query: 601 TGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARG 660
TGIVPGV+SNNLKITD+LLDQNLVAKISSYNLPLLAEN VGH S D + SAR
Sbjct: 597 TGIVPGVYSNNLKITDVLLDQNLVAKISSYNLPLLAENRGMVGHGASSGASKDLSLSARI 656
Query: 661 KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKAC 720
+EK+D+YDFGLILLEI++GR L S +VD+L++QLQA +T D++ARRSMVDPAV + C
Sbjct: 657 NQDEKVDVYDFGLILLEILLGRSLTSGNDVDVLQDQLQASITRDDAARRSMVDPAVRRVC 716
Query: 721 LDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWH--SQSSEGSPISPPRP 778
+SLKTMME+CVRCLLKNPA+RPS+ED+LWNLQFAAQVQD W SQSSEGSP++
Sbjct: 717 SYQSLKTMMEICVRCLLKNPADRPSIEDILWNLQFAAQVQDPWRGDSQSSEGSPVAATHQ 776
Query: 779 SRQHLSFH 786
+ H++ H
Sbjct: 777 PQLHITIH 784
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357508805|ref|XP_003624691.1| hypothetical protein MTR_7g086420 [Medicago truncatula] gi|87162732|gb|ABD28527.1| Protein kinase [Medicago truncatula] gi|355499706|gb|AES80909.1| hypothetical protein MTR_7g086420 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 1053 bits (2724), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/777 (67%), Positives = 626/777 (80%), Gaps = 9/777 (1%)
Query: 12 LLVLAYILLQVNHSEQLQSSQAQTLLRIQGLLNNPAVLSSWNITTEFCNTEPTSSLTVVC 71
VL ILL +NHSEQLQSS QTLLRIQ LN P+ LS+WN +T+FCNT+ SSLTVVC
Sbjct: 5 FFVLVTILLSINHSEQLQSSHTQTLLRIQQQLNFPSALSNWNNSTDFCNTDSNSSLTVVC 64
Query: 72 YEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLS 131
YE++ITQLHI+G + P LP +FS+DSFVTTLVKLP LKVL LVSLG+WGPL GKI+RLS
Sbjct: 65 YEDTITQLHIIGEGKTPPLPKNFSIDSFVTTLVKLPSLKVLTLVSLGIWGPLPGKIARLS 124
Query: 132 SLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMF 191
SLEI+NMSSN L G+IP ELS L +LQTLILD+NM +G+VP ++ L VLSL+NN+F
Sbjct: 125 SLEIVNMSSNHLYGSIPVELSSLLNLQTLILDDNMFSGQVP----TVSALTVLSLKNNLF 180
Query: 192 NGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVT 251
NG+LP+S S LENLR+++LS+N YG VPD S L LQVL+L++NA GPQFPK+G KLVT
Sbjct: 181 NGSLPNSVSNLENLRIISLSHNKLYGVVPDLSHLRNLQVLELDDNAFGPQFPKLGNKLVT 240
Query: 252 MILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKL 311
++L N FRS IPA+VSSYYQL+R D+SSN FVGPF ALLSLPSI YLNI+ NKLTG L
Sbjct: 241 IVLRNNMFRSGIPADVSSYYQLERFDISSNTFVGPFQPALLSLPSIAYLNISRNKLTGML 300
Query: 312 FDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAAGNENQHPLSFCQNE 371
F +LSCN EL VDLSSNLLTG LP CL++ S +R VLYARNCL +NQ P C E
Sbjct: 301 FGNLSCNSELEVVDLSSNLLTGSLPKCLVSNSIDRTVLYARNCLETTKQNQQPPPSCHTE 360
Query: 372 ALAVGILPLQKKQKQVSKAVLALSIIGGIIGGISLVVIAFLLVRRTKSKQTMKKTPTRLI 431
ALAVGILP +KK+KQVSK VLAL I+GG +GG++LV++ +VRR ++ MK PTRLI
Sbjct: 361 ALAVGILPDRKKKKQVSKVVLALGIVGGTLGGVALVLLILFIVRRGNARSKMKNPPTRLI 420
Query: 432 QENASTGYTSKFLSDARYISQTMKLGALGLPAYRTFSLEELEEATNNFDTSAFMGEGSQG 491
ENA++GYTSK LSDARYISQT K GALGLP YR+FSLEE+E ATNNFDT++ MGE S G
Sbjct: 421 SENAASGYTSKLLSDARYISQTKKFGALGLPTYRSFSLEEIEAATNNFDTASLMGEDSYG 480
Query: 492 QMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551
+MYRG+LKNG+ V IRC+KMKK +ST+NFMHH+ELISKLRHRHLVSALGHCF+C +DSS
Sbjct: 481 EMYRGQLKNGSIVVIRCIKMKKRYSTQNFMHHMELISKLRHRHLVSALGHCFKCSLEDSS 540
Query: 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNN 611
VS+IFL+FEYVPNGTLRSW S+GH +SL WTQRI AAIGVAKGIQFLHTGIVPGV+SNN
Sbjct: 541 VSKIFLVFEYVPNGTLRSWTSDGHTGRSLNWTQRIGAAIGVAKGIQFLHTGIVPGVYSNN 600
Query: 612 LKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDF 671
+KI DILLD NLVAKISSYNLPLL+ N KV GS + + RGK E+K DIYDF
Sbjct: 601 IKIEDILLDHNLVAKISSYNLPLLS-NIGKVRRGNSSDGSKHSSINKRGKHEDKCDIYDF 659
Query: 672 GLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEV 731
G+ILLEII+GR +K+ + + K+ LQ + ADE ARRS+VDPA+ KACL++SLKTM E+
Sbjct: 660 GVILLEIILGRTIKTTNDAEAFKDLLQTSLGADEDARRSIVDPAIRKACLEQSLKTMTEI 719
Query: 732 CVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWH--SQSSEGSPISPPRPSRQHLSFH 786
CVRC++K PAERPS+EDVLWNLQFAAQVQDAW SQSSEGSP SP P R +FH
Sbjct: 720 CVRCMIKEPAERPSIEDVLWNLQFAAQVQDAWRGDSQSSEGSPGSPLGPQRT--AFH 774
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147854936|emb|CAN80270.1| hypothetical protein VITISV_020032 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1053 bits (2722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/785 (68%), Positives = 617/785 (78%), Gaps = 42/785 (5%)
Query: 4 ASRFSQCTLLVLAYILLQVNHSEQLQSSQAQTLLRIQGLLNNPAVLSSWNITTEFCNTEP 63
A F LLVL IL + SEQL SSQAQTL+RIQG+LN PA+LSSWN T+FC+TEP
Sbjct: 2 AKGFCHWALLVLVXILGSIRPSEQLPSSQAQTLIRIQGILNFPAILSSWNNNTDFCDTEP 61
Query: 64 TSSLTVVCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPL 123
+SSLTVVCYEESITQLHI+G+K P LP +FS+DSF+TTLVKLP LKVL LVSLGLWGP+
Sbjct: 62 SSSLTVVCYEESITQLHIIGHKGVPPLPRNFSIDSFITTLVKLPSLKVLTLVSLGLWGPM 121
Query: 124 SGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAV 183
KI+RLSSLEILN+SSN+ G IP+E++ LTSLQTLILD+NM G + DWL LP+LAV
Sbjct: 122 PSKIARLSSLEILNISSNYFYGTIPEEIAYLTSLQTLILDDNMFIGELSDWLSLLPVLAV 181
Query: 184 LSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFP 243
LSL+ N FNG+LP S LENLR+L LS+N FYGEVPD S L LQVLDLE+NALGPQFP
Sbjct: 182 LSLKKNSFNGSLPSSLGSLENLRILTLSHNRFYGEVPDLSSLDNLQVLDLEDNALGPQFP 241
Query: 244 KVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIA 303
++G KLVT++L KN+F S IP EVSSYYQL+RLD+S NRF GPFP +LL+LPS+TYLNIA
Sbjct: 242 RLGTKLVTLVLKKNRFSSGIPVEVSSYYQLERLDISYNRFAGPFPPSLLALPSVTYLNIA 301
Query: 304 DNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAAGNENQH 363
NK TG LF SCN L FVDLSSNLLTG LPNCL + SK RVVLY RNCLA G +NQH
Sbjct: 302 GNKFTGMLFGYQSCNAGLEFVDLSSNLLTGNLPNCLKSDSKKRVVLYGRNCLATGEQNQH 361
Query: 364 PLSFCQNEALAVGILPLQKKQKQVSKAVLALSIIGGIIGGISLVVIAFLLVRRTKSKQTM 423
P SFC+NEALAVGI+P +KKQK SKAVLAL IGGI + F + +T
Sbjct: 362 PFSFCRNEALAVGIIPHRKKQKGASKAVLALG----TIGGILGGIALFWYISQT------ 411
Query: 424 KKTPTRLIQENASTGYTSKFLSDARYISQTMKLGALGLPAYRTFSLEELEEATNNFDTSA 483
M LGALGLPAYRTFSLEELEEATNNFDTS
Sbjct: 412 ------------------------------MNLGALGLPAYRTFSLEELEEATNNFDTST 441
Query: 484 FMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCF 543
FMGEGSQGQMYRG+LK+G+ VAIRCLKMKK HST+NFMHHIELI KLRHRHLVS+LGHCF
Sbjct: 442 FMGEGSQGQMYRGKLKDGSLVAIRCLKMKKSHSTQNFMHHIELILKLRHRHLVSSLGHCF 501
Query: 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI 603
ECY DD+SVSRIFLIFEYVPNGTLRSWISEG + Q+L+WTQRI+AAIGVAKGI+FLHTGI
Sbjct: 502 ECYLDDASVSRIFLIFEYVPNGTLRSWISEGRSRQTLSWTQRIAAAIGVAKGIEFLHTGI 561
Query: 604 VPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLE 663
+PGV+SNNLKITDILLDQNLVAKISSYNLPLLAEN KV I GS + + +AR + E
Sbjct: 562 LPGVYSNNLKITDILLDQNLVAKISSYNLPLLAENMGKVSSGISSGGSKEFSVNARVQHE 621
Query: 664 EKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDE 723
+KIDIYDFG+ILLE+I+GRP S EVD+++N LQA VTAD+++RR+MVD AV++ C DE
Sbjct: 622 DKIDIYDFGVILLELIMGRPFNSTNEVDVIRNWLQACVTADDASRRNMVDAAVHRTCSDE 681
Query: 724 SLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWH--SQSSEGSPISPPRPSRQ 781
SLKTMME+C+RCL K+PAERPS+EDVLWNLQFAAQV+DA S SS+GSP P P R
Sbjct: 682 SLKTMMEICIRCLHKDPAERPSIEDVLWNLQFAAQVEDALRGDSDSSDGSPAFPSLPPRL 741
Query: 782 HLSFH 786
L+ H
Sbjct: 742 RLNIH 746
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449523778|ref|XP_004168900.1| PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At3g03770-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1048 bits (2710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/780 (67%), Positives = 632/780 (81%), Gaps = 6/780 (0%)
Query: 1 MARASRFSQCTLLVLAYILLQVNHSEQLQSSQAQTLLRIQGLLNNPAVLSSWNITTEFCN 60
MA+ R S C +++ ++ +VN SEQLQ SQ +TLLRIQ LLN PAVLS+WN +T+FCN
Sbjct: 1 MAQILRNSLCLAILILFV--RVNFSEQLQLSQIRTLLRIQQLLNFPAVLSNWNYSTDFCN 58
Query: 61 TEPTSSLTVVCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLW 120
EP S +TVVCYE ++TQLHI+G K A +LP +FSM SFV TL KLPDLKVL LVSLGLW
Sbjct: 59 LEPDSYVTVVCYEGNLTQLHIIGKKGALLLPHNFSMKSFVNTLAKLPDLKVLTLVSLGLW 118
Query: 121 GPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPI 180
G + GKI+ LSSLEILNMSSNFL GAIPQE+S+L+ L+TLILD+NMLAG++PDW LP+
Sbjct: 119 GSIPGKIAHLSSLEILNMSSNFLYGAIPQEISLLSGLRTLILDDNMLAGQLPDWFHVLPL 178
Query: 181 LAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGP 240
L VLSL++N NG+LP+S + LENLRVL+LS+NHFYGE+PD S LT LQVL+LE+N GP
Sbjct: 179 LTVLSLKHNNLNGSLPNSLNELENLRVLSLSHNHFYGELPDLSTLTNLQVLELEDNGFGP 238
Query: 241 QFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYL 300
QFP++G KLV + LSKNK RS+IP EVSS+YQLQ D+S N VGP P A SLPS++YL
Sbjct: 239 QFPQLGNKLVAVKLSKNKLRSSIPPEVSSFYQLQYFDVSLNSLVGPLPSAFFSLPSLSYL 298
Query: 301 NIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAAGNE 360
NI+ NKLTG L D++SCN EL VDLSSNLLTG LP CLLA +++RVVLY RNC G +
Sbjct: 299 NISGNKLTGMLMDNISCNDELKVVDLSSNLLTGSLPQCLLADTRDRVVLYLRNCFVTGEQ 358
Query: 361 NQHPLSFCQNEALAVGILPLQKKQKQVSKAVLALSIIGGIIGGISLVVIAFLLVRRTKSK 420
QHP+S+CQNEALAVGI+P +KK+ Q KAVLALSI+GG++G I L+ I +++VRR K
Sbjct: 359 QQHPVSYCQNEALAVGIVPEEKKKDQSRKAVLALSIVGGVVGVIILIGIIYIVVRRRNEK 418
Query: 421 QTMKKTPTRLIQENASTGYTSKFLSDARYISQTMKLGALGLPAYRTFSLEELEEATNNFD 480
T+KK PT LI EN S GYTSK LSDARYISQTM+ LGL YR S EE+E+AT NFD
Sbjct: 419 NTVKKPPTNLIVENPSAGYTSKLLSDARYISQTMQFAPLGLSTYRLLSYEEIEDATKNFD 478
Query: 481 TSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALG 540
+SAFMGEGSQGQMYRG+LK+G+ VAIRCLKMKK +ST+NF HHI+LISKLRHRHLVSALG
Sbjct: 479 SSAFMGEGSQGQMYRGQLKDGSLVAIRCLKMKKRYSTQNFTHHIDLISKLRHRHLVSALG 538
Query: 541 HCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLH 600
HCFE Y +DSSVSRIFL+FEYVPNGTLRSWIS H+ +SLTWTQRI+AA+G+AKGIQFLH
Sbjct: 539 HCFELYLEDSSVSRIFLVFEYVPNGTLRSWISGRHSRRSLTWTQRIAAAVGIAKGIQFLH 598
Query: 601 TGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARG 660
+V GV+SNN+KITD+LLDQNL AKISSYNLPL+AE+ KVG + GS DP R
Sbjct: 599 --MVAGVYSNNIKITDVLLDQNLAAKISSYNLPLMAESMAKVGRGVSSGGSKDPGCHERI 656
Query: 661 KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKAC 720
E + DIYDFG+ILLEII GR LKS+ E+++L+ +LQ +++D ARRS+VDP++ C
Sbjct: 657 NQEAQADIYDFGVILLEIIRGRALKSKNEINVLREKLQEAISSDSIARRSIVDPSIQNEC 716
Query: 721 LDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAW--HSQSSEGSPISPPRP 778
LD+SLKTMMEVCVRCLLK+P RPS+EDVLWNLQFAAQVQDAW +SS+GSPISP +P
Sbjct: 717 LDQSLKTMMEVCVRCLLKDPVTRPSLEDVLWNLQFAAQVQDAWCGEYRSSDGSPISPSQP 776
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449462762|ref|XP_004149109.1| PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At3g03770-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1046 bits (2704), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/780 (66%), Positives = 631/780 (80%), Gaps = 6/780 (0%)
Query: 1 MARASRFSQCTLLVLAYILLQVNHSEQLQSSQAQTLLRIQGLLNNPAVLSSWNITTEFCN 60
MA+ R S C +++ ++ +VN SEQLQ SQ +TLLRIQ LLN PAVLS+WN +T+FCN
Sbjct: 1 MAQIFRNSLCLAILILFV--RVNFSEQLQLSQIRTLLRIQQLLNFPAVLSNWNYSTDFCN 58
Query: 61 TEPTSSLTVVCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLW 120
EP S +TVVCYE ++TQLHI+G K A +LP +FSM S V TL KLPDLKVL LVSLGLW
Sbjct: 59 LEPDSYVTVVCYEGNLTQLHIIGKKGALLLPHNFSMKSLVNTLAKLPDLKVLTLVSLGLW 118
Query: 121 GPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPI 180
G + GKI+ LSSLEILNMSSNFL GAIPQE+S+L+ L+TLILD+NMLAG++PDW LP+
Sbjct: 119 GSIPGKIAHLSSLEILNMSSNFLYGAIPQEISLLSGLRTLILDDNMLAGQLPDWFHVLPL 178
Query: 181 LAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGP 240
L VLSL++N NG+LP+S + LENLRVL+LS+NHFYGE+PD S LT LQVL+LE+N GP
Sbjct: 179 LTVLSLKHNNLNGSLPNSLNELENLRVLSLSHNHFYGELPDLSTLTNLQVLELEDNGFGP 238
Query: 241 QFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYL 300
QFP++G KLV + LSKNK RS+IP EVSS+YQLQ D+S N VGP P A SLPS++YL
Sbjct: 239 QFPQLGNKLVAVKLSKNKLRSSIPPEVSSFYQLQYFDVSLNSLVGPLPSAFFSLPSLSYL 298
Query: 301 NIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAAGNE 360
NI+ NKLTG L D++SCN EL VDLSSNLLTG LP CLLA +++RVVLY RNC G +
Sbjct: 299 NISGNKLTGMLMDNISCNDELKVVDLSSNLLTGSLPQCLLADTRDRVVLYLRNCFVTGEQ 358
Query: 361 NQHPLSFCQNEALAVGILPLQKKQKQVSKAVLALSIIGGIIGGISLVVIAFLLVRRTKSK 420
QHP+S+CQNEALAVGI+P +KK+ Q KAVLALSI+GG++G I L+ I +++VRR K
Sbjct: 359 QQHPVSYCQNEALAVGIVPEEKKKDQSRKAVLALSIVGGVVGVIILIGIIYIVVRRRNEK 418
Query: 421 QTMKKTPTRLIQENASTGYTSKFLSDARYISQTMKLGALGLPAYRTFSLEELEEATNNFD 480
T+KK PT LI EN S GYTSK LSDARYISQTM+ LGL YR S EE+E+AT NFD
Sbjct: 419 NTVKKPPTNLIVENPSAGYTSKLLSDARYISQTMQFAPLGLSTYRLLSYEEIEDATKNFD 478
Query: 481 TSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALG 540
+SAFMGEGSQGQMYRG+LK+G+ VAIRCLKMKK +ST+NF HHI+LISKLRHRHLVSALG
Sbjct: 479 SSAFMGEGSQGQMYRGQLKDGSLVAIRCLKMKKRYSTQNFTHHIDLISKLRHRHLVSALG 538
Query: 541 HCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLH 600
HCFE Y +DSSVSRIFL+FEYVPNGTLRSWIS H+ +SLTWTQRI+AA+G+AKGIQFLH
Sbjct: 539 HCFELYLEDSSVSRIFLVFEYVPNGTLRSWISGRHSRRSLTWTQRIAAAVGIAKGIQFLH 598
Query: 601 TGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARG 660
+V GV+SNN+KITD+LLDQNL AKISSYNLPL+AE+ KVG + GS DP R
Sbjct: 599 --MVAGVYSNNIKITDVLLDQNLAAKISSYNLPLMAESMAKVGRGVSSGGSKDPGCHERI 656
Query: 661 KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKAC 720
E + DIYDFG+ILLEII GR LKS+ E+++L+ +LQ +++D ARRS+VDP++ C
Sbjct: 657 NQEAQADIYDFGVILLEIIRGRALKSKNEINVLREKLQEAISSDSIARRSIVDPSIQNEC 716
Query: 721 LDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAW--HSQSSEGSPISPPRP 778
LD+SLKTMMEVCVRCLLK+P RPS+EDVLWNLQFAAQVQDAW +SS+GSPISP +P
Sbjct: 717 LDQSLKTMMEVCVRCLLKDPVTRPSLEDVLWNLQFAAQVQDAWCGEYRSSDGSPISPSQP 776
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356571765|ref|XP_003554043.1| PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At3g03770-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1045 bits (2701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/746 (68%), Positives = 606/746 (81%), Gaps = 1/746 (0%)
Query: 22 VNHSEQLQSSQAQTLLRIQGLLNNPAVLSSWNITTEFCNTEPTSSLTVVCYEESITQLHI 81
++ SEQLQSS +QTLLRIQ LLN PA LS+WN +T+FCNT+ SSLTVVCYE++ITQLHI
Sbjct: 20 IHCSEQLQSSHSQTLLRIQQLLNFPAALSNWNSSTDFCNTDSNSSLTVVCYEDTITQLHI 79
Query: 82 VGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSN 141
+G +R LP +FS+DSFVTTLV+LP LKVL LVSLG+WGPL KI+RLSSLEI+NMSSN
Sbjct: 80 IGERRDTPLPRNFSIDSFVTTLVRLPSLKVLTLVSLGIWGPLPSKIARLSSLEIVNMSSN 139
Query: 142 FLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSY 201
FL G+IPQELS L+SLQTLI D NMLA P WL SL L VLSL+NN FNG+LP S
Sbjct: 140 FLYGSIPQELSSLSSLQTLIFDNNMLADTFPHWLDSLQALTVLSLKNNKFNGSLPKSLGN 199
Query: 202 LENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRS 261
+ENLR L+LS+NHFYG VPD S LT LQVL+L++NA GPQFP++G KLV ++L KN FRS
Sbjct: 200 VENLRTLSLSHNHFYGAVPDLSRLTNLQVLELDDNAFGPQFPQLGNKLVILVLRKNSFRS 259
Query: 262 AIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPEL 321
IPAE+SSYYQL+RLD+SSN FVGPF LLSLPSITYLNI+ NKLTG LF++LSCN EL
Sbjct: 260 GIPAELSSYYQLERLDISSNSFVGPFQPGLLSLPSITYLNISGNKLTGMLFENLSCNSEL 319
Query: 322 GFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAAGNENQHPLSFCQNEALAVGILPLQ 381
VDLSSNLLTG LP CL++ S + VLYARNCL N+NQ P FC EALAVGILP
Sbjct: 320 DVVDLSSNLLTGSLPRCLVSNSSDSTVLYARNCLDTTNQNQQPQPFCHTEALAVGILPET 379
Query: 382 KKQKQVSKAVLALSIIGGIIGGISLVVIAFLLVRRTKSKQTMKKTPTRLIQENASTGYTS 441
KK KQVSK VL+L I+GG +GG++LV++ F +VRR + K PTRLI ENA++GYTS
Sbjct: 380 KKHKQVSKVVLSLGIVGGTLGGVALVLLVFFIVRRGNDRSKTKNPPTRLISENAASGYTS 439
Query: 442 KFLSDARYISQTMKLGALGLPAYRTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNG 501
K SDARYISQT KLGA+GLP YR+FSLEE+E ATN FDT++ MGE S G+MYRG+LKNG
Sbjct: 440 KLFSDARYISQTKKLGAVGLPTYRSFSLEEIESATNYFDTASLMGEDSYGKMYRGQLKNG 499
Query: 502 TFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEY 561
+ VAIRC++MKK HST+NF+ HIELISKLRHRHLVSA+GHCFEC DDSSVS++FL+FEY
Sbjct: 500 SLVAIRCVEMKKRHSTQNFVQHIELISKLRHRHLVSAIGHCFECSLDDSSVSKVFLVFEY 559
Query: 562 VPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ 621
VPNGTLR+WIS+ HA +S +WTQRI AAIGVAKGIQFLHTGIVPGV+SN+LKI D+LLDQ
Sbjct: 560 VPNGTLRNWISDEHARKSFSWTQRIGAAIGVAKGIQFLHTGIVPGVYSNDLKIEDVLLDQ 619
Query: 622 NLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVG 681
NLVAKISSY+LPLL+ N KV SG + +NS K E+K DIY+FG+ILLE+I+G
Sbjct: 620 NLVAKISSYHLPLLS-NMGKVRRGNSSSGLKNSSNSKSVKQEDKSDIYNFGVILLELILG 678
Query: 682 RPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA 741
R +K+ + D ++ LQA + DE RR +VDPA KACLD+SLKTMME+CVRCL+K PA
Sbjct: 679 RQIKTVNDADAFRDLLQASLGGDEEGRRGVVDPAFRKACLDQSLKTMMEICVRCLVKEPA 738
Query: 742 ERPSVEDVLWNLQFAAQVQDAWHSQS 767
+RPS+EDVLWNLQFA+QVQDAW S
Sbjct: 739 DRPSIEDVLWNLQFASQVQDAWRGDS 764
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356560829|ref|XP_003548689.1| PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At3g03770-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1028 bits (2658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/765 (66%), Positives = 614/765 (80%), Gaps = 2/765 (0%)
Query: 4 ASRFSQCTLLVLAYILLQVNHSEQLQSSQAQTLLRIQGLLNNPAVLSSWNITTEFCNTEP 63
A + LV +LL ++ SEQLQSS +QTLLRIQ LLN P LS+WN T+FCNT+
Sbjct: 2 AYKHHPSVFLVFVTVLLSIHCSEQLQSSHSQTLLRIQQLLNFPVSLSNWNNNTDFCNTDS 61
Query: 64 -TSSLTVVCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGP 122
+SSL VVCY ++ITQLHI+G +R LP +FS+DSFVTTLV+LP LKVL LVSLG+WGP
Sbjct: 62 NSSSLNVVCYGDTITQLHIIGERRDTPLPRNFSIDSFVTTLVRLPSLKVLTLVSLGIWGP 121
Query: 123 LSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILA 182
L GKI+RLSSLEI NMSSNFL G+IPQEL++L+SLQTLI D NMLA P W+ SL L
Sbjct: 122 LPGKIARLSSLEIFNMSSNFLYGSIPQELTLLSSLQTLIFDNNMLADTFPRWIDSLQALT 181
Query: 183 VLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQF 242
VLSL+NN FNG+LP+S +ENLR L+LS+NHFYG VPD SGLT LQV++L++NA GPQF
Sbjct: 182 VLSLKNNKFNGSLPNSLGNVENLRTLSLSHNHFYGVVPDLSGLTNLQVIELDDNAFGPQF 241
Query: 243 PKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNI 302
P++G KLVT++L N+FRS IPAE+SSYYQL+R D+S N FVGPF LLSLPSITYLNI
Sbjct: 242 PQLGHKLVTLVLRNNRFRSGIPAELSSYYQLERFDISLNSFVGPFQPGLLSLPSITYLNI 301
Query: 303 ADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAAGNENQ 362
+ NKLTG LF++LSCN EL VDLSSNLLTG LP CL++ S + VLYARNCL N+NQ
Sbjct: 302 SWNKLTGMLFENLSCNSELDVVDLSSNLLTGSLPRCLVSNSSDSTVLYARNCLDTVNQNQ 361
Query: 363 HPLSFCQNEALAVGILPLQKKQKQVSKAVLALSIIGGIIGGISLVVIAFLLVRRTKSKQT 422
P FC EALAVGILP +KK KQVS VL+L I+GG +GG++LV++ F +VRR +
Sbjct: 362 QPQPFCHTEALAVGILPERKKHKQVSTVVLSLGIVGGTLGGVALVLLIFFIVRRGNDRSK 421
Query: 423 MKKTPTRLIQENASTGYTSKFLSDARYISQTMKLGALGLPAYRTFSLEELEEATNNFDTS 482
K PTRLI ENA++GYTSK LSDARYISQT KLGA+GLP YR+FSLEE+E ATN FD +
Sbjct: 422 TKNPPTRLISENAASGYTSKLLSDARYISQTKKLGAVGLPTYRSFSLEEIESATNYFDRA 481
Query: 483 AFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHC 542
+ MGE S G+MYRG+LKNG+ VAIRC++MKK +ST+NF+ HIELISKLRHRHLVSA+GHC
Sbjct: 482 SLMGEDSYGKMYRGQLKNGSLVAIRCVEMKKRYSTQNFVQHIELISKLRHRHLVSAVGHC 541
Query: 543 FECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTG 602
FEC DDSSVS++FL+FEYVPNGTLR+WIS+ HA +SL+WTQ I AAIGVAKGIQFLHTG
Sbjct: 542 FECSLDDSSVSKVFLVFEYVPNGTLRNWISDEHARKSLSWTQHIGAAIGVAKGIQFLHTG 601
Query: 603 IVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKL 662
IVPGV+SN+LKI D+LLDQNLVAKISSY+LPLL+ N KV SG + +NS K
Sbjct: 602 IVPGVYSNDLKIEDVLLDQNLVAKISSYHLPLLS-NMGKVRCGNSSSGLRNSSNSKSVKH 660
Query: 663 EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLD 722
E+K DIYDFG+ILLE+I+GR +K+ + D ++ LQA + ADE RRS+VDPA KACLD
Sbjct: 661 EDKADIYDFGVILLELILGRQIKTANDADAFRDLLQASLGADEEGRRSVVDPAFRKACLD 720
Query: 723 ESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWHSQS 767
+SLKTMME+CVRCL+K PA+RPS+EDVLWNLQFA+QVQDAW S
Sbjct: 721 QSLKTMMEICVRCLVKEPADRPSIEDVLWNLQFASQVQDAWRGDS 765
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 786 | ||||||
| TAIR|locus:2079339 | 802 | AT3G03770 [Arabidopsis thalian | 0.975 | 0.956 | 0.660 | 1.1e-266 | |
| TAIR|locus:2167326 | 680 | AT5G63410 [Arabidopsis thalian | 0.695 | 0.804 | 0.390 | 2e-97 | |
| TAIR|locus:2181017 | 951 | AT5G01950 [Arabidopsis thalian | 0.356 | 0.294 | 0.349 | 4.5e-62 | |
| TAIR|locus:2182870 | 1192 | EMS1 "EXCESS MICROSPOROCYTES1" | 0.805 | 0.531 | 0.283 | 5.8e-60 | |
| TAIR|locus:2156349 | 1252 | GSO2 "GASSHO 2" [Arabidopsis t | 0.339 | 0.213 | 0.284 | 1.3e-57 | |
| TAIR|locus:2120362 | 1249 | GSO1 "GASSHO1" [Arabidopsis th | 0.381 | 0.240 | 0.287 | 2.2e-56 | |
| TAIR|locus:2084016 | 937 | AT3G53590 [Arabidopsis thalian | 0.354 | 0.297 | 0.328 | 1e-53 | |
| TAIR|locus:2167948 | 966 | ERL1 "ERECTA-like 1" [Arabidop | 0.347 | 0.282 | 0.292 | 5.4e-53 | |
| TAIR|locus:2203718 | 1035 | AT1G53440 [Arabidopsis thalian | 0.416 | 0.315 | 0.291 | 2.9e-52 | |
| TAIR|locus:2019863 | 971 | AT1G79620 [Arabidopsis thalian | 0.384 | 0.311 | 0.320 | 4.2e-52 |
| TAIR|locus:2079339 AT3G03770 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2565 (908.0 bits), Expect = 1.1e-266, P = 1.1e-266
Identities = 511/774 (66%), Positives = 603/774 (77%)
Query: 12 LLVLAYILLQVNHSEQLQSSQAQTLLRIQGLLNNPAVLSSWNITTEFCNTEPTSSLTVVC 71
LL+L +L ++ S QLQSSQ+QTLLR+Q LL P VL+SWN T+FCN+EP+ SLTVVC
Sbjct: 10 LLLLVLLLASIDGSTQLQSSQSQTLLRLQQLLYYPKVLNSWNNYTDFCNSEPSPSLTVVC 69
Query: 72 YEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLS 131
YE+S+TQLHI+G+ MLP SFS++SFVTTLVKLPD+KVL VSLGLWG L KI+RLS
Sbjct: 70 YEDSVTQLHIIGDNGTHMLPKSFSINSFVTTLVKLPDVKVLTFVSLGLWGWLPQKINRLS 129
Query: 132 SLEILNMSSNFLNGAIPXXXXXXXXXXXXXXDENMLAGRVPDWLGSLPILAVLSLRNNMF 191
SLEILN+SSNFL G IP DENM +G +PDW+ SLP LAVLSLR N+
Sbjct: 130 SLEILNVSSNFLFGPIPHELSSLATLQTLILDENMFSGELPDWIDSLPSLAVLSLRKNVL 189
Query: 192 NGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVT 251
NG+LP S S L LRVLAL+NN F G +PD S LT LQVLDLE N+ GP FP++ KLVT
Sbjct: 190 NGSLPSSLSSLSGLRVLALANNRFNGALPDLSHLTNLQVLDLEGNSFGPLFPRLSNKLVT 249
Query: 252 MILSKNKFRSAIPAE-VSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGK 310
+ILSKNKFRSA+ AE VSS YQLQ LDLS N FVGPFP +L+SLP+ITYLNI+ NKLTG+
Sbjct: 250 LILSKNKFRSAVSAEEVSSLYQLQHLDLSYNTFVGPFPTSLMSLPAITYLNISHNKLTGR 309
Query: 311 LFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGS-KNRVVLYARNCLAAGNENQHPLSFCQ 369
L +LSCN +L FVD+SSNLLTG LP CL S +R V+YA NCLA NE+Q P+SFC
Sbjct: 310 LSANLSCNSQLMFVDMSSNLLTGSLPTCLKPSSGTSRDVVYASNCLATTNEDQRPVSFCS 369
Query: 370 NEALAVGILPLQKKQKQVSKXXXXXXXXXXXXXXXXXXXXXFLLVRRTKSKQTMKKTPTR 429
NEALAVGILP Q++ K VSK F+++RR +K+T+ K+ R
Sbjct: 370 NEALAVGILP-QRRNK-VSKVGIALGVTASILGVLLLAGALFVVLRRLNAKKTVTKSSPR 427
Query: 430 LIQENASTGYTSKFLSDARYISQTMKLGALGLPAYRTFSLEELEEATNNFDTSAFMGEGS 489
LI+ENAS GYTSK LSDARYISQTMKLG LGLPAYRTFSLEELE ATNNF++SAFMGEGS
Sbjct: 428 LIRENASMGYTSKLLSDARYISQTMKLGGLGLPAYRTFSLEELEYATNNFESSAFMGEGS 487
Query: 490 QGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDD 549
QGQ+YRGRLK+G+FVAIRCLKMKK ST+N MHHIELI+KLRHRHLVS LGHCFECY DD
Sbjct: 488 QGQIYRGRLKDGSFVAIRCLKMKKSCSTQNLMHHIELIAKLRHRHLVSVLGHCFECYLDD 547
Query: 550 SSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFS 609
S+VSR+F +FEYVPNG LR+WIS+GH + LTW QRIS AIGVAKGIQFLHTGIVPGV+
Sbjct: 548 STVSRMFFVFEYVPNGELRTWISDGHMGRLLTWEQRISVAIGVAKGIQFLHTGIVPGVYD 607
Query: 610 NNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIY 669
NNLK+TDILLD NL AK+SSYNLPLL E KVG V SG P + K E+KIDIY
Sbjct: 608 NNLKMTDILLDNNLAAKLSSYNLPLLVEGLGKVGQVGSRSG---PKGTPSIKDEDKIDIY 664
Query: 670 DFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMM 729
DFG+ILLE+IVGRPL+++ +VD+LK QLQA ++AD+ ARRSMVDP V++AC D+SLKTMM
Sbjct: 665 DFGVILLELIVGRPLRAKSQVDVLKEQLQASISADDGARRSMVDPTVHRACSDQSLKTMM 724
Query: 730 EVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWHSQSSEGSPISPPRPSRQHL 783
E+CVRCLLK+P ERPS+EDVLWNLQFA+QVQ+ W S+ S + P P+ L
Sbjct: 725 EICVRCLLKDPLERPSIEDVLWNLQFASQVQEGWLQNSNPSSNLGSPSPAASSL 778
|
|
| TAIR|locus:2167326 AT5G63410 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 968 (345.8 bits), Expect = 2.0e-97, P = 2.0e-97
Identities = 227/581 (39%), Positives = 338/581 (58%)
Query: 198 SFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNAL-GPQFPKVGK--KLVTMI 253
+ S L++LRVL L++ +G +P+ L+ L+ LDL NN L G PK+ KL T
Sbjct: 112 TLSRLKSLRVLTLASLGIWGRLPEKLHRLSSLEYLDLSNNFLFGSVPPKLSTMVKLETFR 171
Query: 254 LSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFD 313
N F +P+ SY+ L+ L SN+ G +LLSL +I Y+++ N L+G L D
Sbjct: 172 FDHNFFNGTLPSWFDSYWYLKVLSFKSNKLSGELHSSLLSLSTIEYIDLRANSLSGSLPD 231
Query: 314 DLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVL-YARNCLAAGNENQHPLSFCQNEA 372
DL C +L F+D+S N LTG+LP CL SK + L + NCL+ + QHP SFC E
Sbjct: 232 DLKCGSKLWFIDISDNKLTGKLPRCL--SSKQDIALRFNGNCLSL-EKQQHPESFCVKEV 288
Query: 373 LAVGILPLQKK--------QKQVSKXXXXXXXXXXXXXXXXXXXXXFLLVRRTKSKQTMK 424
A + + +++ K F+L+RR K T K
Sbjct: 289 RAAAKAEAKAEAEAANESGKRKWKKGALIGLIVGISMSVLVLVCCVFILLRR-KGV-TKK 346
Query: 425 KTPTRLIQEN-ASTGYTSKFLSDARYISQTMKLGALGLPAYRTFSLEELEEATNNFDTSA 483
+Q+N +TG++S+ LS+ARYIS+T K G+ LP R FSLEE+ +AT NFD +
Sbjct: 347 HVHHNTVQDNHPTTGFSSEILSNARYISETSKFGSEDLPVCRQFSLEEIVKATKNFDKTM 406
Query: 484 FMGEGS-QGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHC 542
+GE S G +Y+G L+NGT VAIRCL K +S RN ++L++KLRH +LV LGHC
Sbjct: 407 ILGESSLYGTLYKGNLENGTKVAIRCLPSSKKYSIRNLKLRLDLLAKLRHPNLVCLLGHC 466
Query: 543 FECYF-DDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHT 601
+C DD SV ++FLI+EY+PNG +S +S+ + + + W++R++ GVAK + FLHT
Sbjct: 467 IDCGGKDDYSVEKVFLIYEYIPNGNFQSCLSDNSSGKGMNWSERLNVLTGVAKAVHFLHT 526
Query: 602 GIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGK 661
G++PG FSN LK ++LL+Q+ AK+S Y L +++E A + I S + +
Sbjct: 527 GVIPGFFSNRLKTNNVLLNQHRFAKLSDYGLSIVSE-ATRHNTEIAKSWQMS-------R 578
Query: 662 LEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACL 721
LE+ D+Y FGLILL+ IVG + +R+E L+++L ++ + E RR MV+P V C
Sbjct: 579 LED--DVYSFGLILLQSIVGPSVSAREEA-FLRDELASLES--EEGRRRMVNPTVQATCR 633
Query: 722 DESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDA 762
+ SL ++ + +C+ RPS ED+LWNLQ+A+Q+Q A
Sbjct: 634 NGSLIRVITLMNKCVSPESLSRPSFEDILWNLQYASQLQAA 674
|
|
| TAIR|locus:2181017 AT5G01950 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 418 (152.2 bits), Expect = 4.5e-62, Sum P(2) = 4.5e-62
Identities = 106/303 (34%), Positives = 166/303 (54%)
Query: 465 RTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHI 524
R FS +EL EAT++F +S +G G G++YRG L + T AI+ + F++ I
Sbjct: 612 RGFSFKELAEATDDFSSSTLVGRGGYGKVYRGVLSDNTVAAIKRADEGSLQGEKEFLNEI 671
Query: 525 ELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQ 584
EL+S+L HR+LVS +G+C D+ S L++E++ NGTLR W+S +SL++
Sbjct: 672 ELLSRLHHRNLVSLIGYC-----DEESEQ--MLVYEFMSNGTLRDWLS-AKGKESLSFGM 723
Query: 585 RISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLA---ENAEK 641
RI A+G AKGI +LHT P VF ++K ++ILLD N AK++ + L LA E+ E
Sbjct: 724 RIRVALGAAKGILYLHTEANPPVFHRDIKASNILLDPNFNAKVADFGLSRLAPVLEDEED 783
Query: 642 VG-HVIPY----SGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQ 696
V HV G +DP KL +K D+Y G++ LE++ G S KN
Sbjct: 784 VPKHVSTVVRGTPGYLDPEYFLTHKLTDKSDVYSIGVVFLELLTGMHAISHG-----KNI 838
Query: 697 LQAVVTADESARR-SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755
++ V TA++ S++D + + ES++ + +RC +P RP + +V+ L+
Sbjct: 839 VREVKTAEQRDMMVSLIDKRMEPWSM-ESVEKFAALALRCSHDSPEMRPGMAEVVKELES 897
Query: 756 AAQ 758
Q
Sbjct: 898 LLQ 900
|
|
| TAIR|locus:2182870 EMS1 "EXCESS MICROSPOROCYTES1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 624 (224.7 bits), Expect = 5.8e-60, P = 5.8e-60
Identities = 191/674 (28%), Positives = 316/674 (46%)
Query: 109 LKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPXXXXXXXXXXXX-------- 160
L L L S L G + KI+ L+ L+ L +S N L+G+IP
Sbjct: 522 LTTLDLGSNNLQGQIPDKITALAQLQCLVLSYNNLSGSIPSKPSAYFHQIEMPDLSFLQH 581
Query: 161 ----XXDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFY 216
N L+G +P+ LG +L +SL NN +G +P S S L NL +L LS N
Sbjct: 582 HGIFDLSYNRLSGPIPEELGECLVLVEISLSNNHLSGEIPASLSRLTNLTILDLSGNALT 641
Query: 217 GEVPDFSGLTY-LQVLDLENNALGPQFPK-VGK--KLVTMILSKNKFRSAIPAEVSSYYQ 272
G +P G + LQ L+L NN L P+ G LV + L+KNK +PA + + +
Sbjct: 642 GSIPKEMGNSLKLQGLNLANNQLNGHIPESFGLLGSLVKLNLTKNKLDGPVPASLGNLKE 701
Query: 273 LQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLT 332
L +DLS N G L ++ + L I NK TG++ +L +L ++D+S NLL+
Sbjct: 702 LTHMDLSFNNLSGELSSELSTMEKLVGLYIEQNKFTGEIPSELGNLTQLEYLDVSENLLS 761
Query: 333 GQLPNCLLAGSKNRVVL-YARNCLAAGNEN----QHPLS--FCQNEALAVGILPLQKKQK 385
G++P + G N L A+N L + Q P N+ L ++ K +
Sbjct: 762 GEIPT-KICGLPNLEFLNLAKNNLRGEVPSDGVCQDPSKALLSGNKELCGRVVGSDCKIE 820
Query: 386 QVSKXXXXXXXXXXXXXXXXXXXXXFLLVRRTKSKQTMKKTPTRLIQENASTGYTSK--- 442
F L R +K+ ++ ++E+ G+ +
Sbjct: 821 GTKLRSAWGIAGLMLGFTIIVFVFVFSLRRWAMTKRVKQRDDPERMEESRLKGFVDQNLY 880
Query: 443 FLSDARYISQ-TMKLGALGLPAYRTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNG 501
FLS +R ++ + P + L ++ EAT++F +G+G G +Y+ L
Sbjct: 881 FLSGSRSREPLSINIAMFEQPLLKV-RLGDIVEATDHFSKKNIIGDGGFGTVYKACLPGE 939
Query: 502 TFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEY 561
VA++ L K R FM +E + K++H +LVS LG+C F + + L++EY
Sbjct: 940 KTVAVKKLSEAKTQGNREFMAEMETLGKVKHPNLVSLLGYCS---FSEEKL----LVYEY 992
Query: 562 VPNGTLRSWI-SEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD 620
+ NG+L W+ ++ + L W++R+ A+G A+G+ FLH G +P + ++K ++ILLD
Sbjct: 993 MVNGSLDHWLRNQTGMLEVLDWSKRLKIAVGAARGLAFLHHGFIPHIIHRDIKASNILLD 1052
Query: 621 QNLVAKISSYNLPLLAENAEK-VGHVIPYS-GSIDPTNSARGKLEEKIDIYDFGLILLEI 678
+ K++ + L L E V VI + G I P + K D+Y FG+ILLE+
Sbjct: 1053 GDFEPKVADFGLARLISACESHVSTVIAGTFGYIPPEYGQSARATTKGDVYSFGVILLEL 1112
Query: 679 IVGR-PL-KSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCL 736
+ G+ P KE + A+ ++ ++DP + L S ++++ + CL
Sbjct: 1113 VTGKEPTGPDFKESEGGNLVGWAIQKINQGKAVDVIDPLLVSVALKNSQLRLLQIAMLCL 1172
Query: 737 LKNPAERPSVEDVL 750
+ PA+RP++ DVL
Sbjct: 1173 AETPAKRPNMLDVL 1186
|
|
| TAIR|locus:2156349 GSO2 "GASSHO 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 345 (126.5 bits), Expect = 1.3e-57, Sum P(2) = 1.3e-57
Identities = 84/295 (28%), Positives = 158/295 (53%)
Query: 470 EELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKK-CHSTRNFMHHIELIS 528
+++ EAT+ + +G G G++Y+ LKNG +A++ + K S ++F ++ +
Sbjct: 939 DDIMEATHYLNEEFMIGSGGSGKVYKAELKNGETIAVKKILWKDDLMSNKSFNREVKTLG 998
Query: 529 KLRHRHLVSALGHCFECYFDDSSVSRI-FLIFEYVPNGTLRSWISEGHAHQS------LT 581
+RHRHLV +G+C S + LI+EY+ NG++ W+ HA+++ L
Sbjct: 999 TIRHRHLVKLMGYC------SSKADGLNLLIYEYMANGSVWDWL---HANENTKKKEVLG 1049
Query: 582 WTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP-LLAENAE 640
W R+ A+G+A+G+++LH VP + ++K +++LLD N+ A + + L +L N +
Sbjct: 1050 WETRLKIALGLAQGVEYLHYDCVPPIVHRDIKSSNVLLDSNIEAHLGDFGLAKILTGNYD 1109
Query: 641 -KVGHVIPYSGS---IDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSR--KEVDLL 693
++GS I P + K EK D+Y G++L+EI+ G+ P ++ +E D++
Sbjct: 1110 TNTESNTMFAGSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKMPTEAMFDEETDMV 1169
Query: 694 KNQLQAVVTADES-ARRSMVDPAVNKA--CLDESLKTMMEVCVRCLLKNPAERPS 745
+ + T S AR ++D + C +E+ ++E+ ++C P ERPS
Sbjct: 1170 RWVETVLDTPPGSEAREKLIDSELKSLLPCEEEAAYQVLEIALQCTKSYPQERPS 1224
|
|
| TAIR|locus:2120362 GSO1 "GASSHO1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 369 (135.0 bits), Expect = 2.2e-56, Sum P(2) = 2.2e-56
Identities = 95/330 (28%), Positives = 168/330 (50%)
Query: 434 NASTGYTSKFLSDARYISQTMKLGALGLPAYRTFSLEELEEATNNFDTSAFMGEGSQGQM 493
+ ST YTS S + GA + E++ EAT+N +G G G++
Sbjct: 910 HGSTAYTSSSSSSQATHKPLFRNGA----SKSDIRWEDIMEATHNLSEEFMIGSGGSGKV 965
Query: 494 YRGRLKNGTFVAIRCLKMKK-CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552
Y+ L+NG VA++ + K S ++F ++ + ++RHRHLV +G+C S
Sbjct: 966 YKAELENGETVAVKKILWKDDLMSNKSFSREVKTLGRIRHRHLVKLMGYC-----SSKSE 1020
Query: 553 SRIFLIFEYVPNGTLRSWISEGHA-----HQSLTWTQRISAAIGVAKGIQFLHTGIVPGV 607
LI+EY+ NG++ W+ E + L W R+ A+G+A+G+++LH VP +
Sbjct: 1021 GLNLLIYEYMKNGSIWDWLHEDKPVLEKKKKLLDWEARLRIAVGLAQGVEYLHHDCVPPI 1080
Query: 608 FSNNLKITDILLDQNLVAKISSYNLP-LLAENAE-----KVGHVIPYSGSIDPTNSARGK 661
++K +++LLD N+ A + + L +L EN + Y G I P + K
Sbjct: 1081 VHRDIKSSNVLLDSNMEAHLGDFGLAKVLTENCDTNTDSNTWFACSY-GYIAPEYAYSLK 1139
Query: 662 LEEKIDIYDFGLILLEIIVGR-PLKS--RKEVDLLKNQLQAVVTADESARRSMVDPAVNK 718
EK D+Y G++L+EI+ G+ P S E+D+++ ++ + SAR ++DP + K
Sbjct: 1140 ATEKSDVYSMGIVLMEIVTGKMPTDSVFGAEMDMVR-WVETHLEVAGSARDKLIDPKL-K 1197
Query: 719 ACL---DESLKTMMEVCVRCLLKNPAERPS 745
L +++ ++E+ ++C +P ERPS
Sbjct: 1198 PLLPFEEDAACQVLEIALQCTKTSPQERPS 1227
|
|
| TAIR|locus:2084016 AT3G53590 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 399 (145.5 bits), Expect = 1.0e-53, Sum P(2) = 1.0e-53
Identities = 100/304 (32%), Positives = 162/304 (53%)
Query: 465 RTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHI 524
+ FS EL +ATN FD+S +G GS G++Y+G L N T VAI+ + S + F++ I
Sbjct: 600 KKFSFVELSDATNGFDSSTLIGRGSYGKVYKGILSNKTEVAIKRGEETSLQSEKEFLNEI 659
Query: 525 ELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQ 584
+L+S+L HR+LVS +G+ S + L++EY+PNG +R W+S +A +L+++
Sbjct: 660 DLLSRLHHRNLVSLIGY-------SSDIGEQMLVYEYMPNGNVRDWLS-ANAADTLSFSM 711
Query: 585 RISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL----PLLAENAE 640
R A+G AKGI +LHT P V ++K ++ILLD L AK++ + L P E
Sbjct: 712 RSHVALGSAKGILYLHTEANPPVIHRDIKTSNILLDCQLHAKVADFGLSRLAPAFGEGDG 771
Query: 641 KVGHVIPY----SGSIDPTNSARGKLEEKIDIYDFGLILLEIIVG-RPLKSRKEVDLLKN 695
+ HV G +DP +L + D+Y FG++LLE++ G P +
Sbjct: 772 EPAHVSTVVRGTPGYLDPEYFMTQQLTVRSDVYSFGVVLLELLTGMHPFFEGTHI----- 826
Query: 696 QLQAVVTADESAR-RSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754
++ V TA+E S+ D + + C + +K + E+ + C P RP + V+ L+
Sbjct: 827 -IREVRTANECGTVLSVADSRMGQ-CSPDKVKKLAELALWCCEDRPETRPPMSKVVKELE 884
Query: 755 FAAQ 758
Q
Sbjct: 885 GICQ 888
|
|
| TAIR|locus:2167948 ERL1 "ERECTA-like 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 352 (129.0 bits), Expect = 5.4e-53, Sum P(2) = 5.4e-53
Identities = 85/291 (29%), Positives = 149/291 (51%)
Query: 463 AYRTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMH 522
A TF +++ T N + +G G+ +Y+ LK+ +AI+ L + H+ R F
Sbjct: 634 AIHTF--DDIMRVTENLNEKFIIGYGASSTVYKCALKSSRPIAIKRLYNQYPHNLREFET 691
Query: 523 HIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTW 582
+E I +RHR++VS G+ S + L ++Y+ NG+L + L W
Sbjct: 692 ELETIGSIRHRNIVSLHGYAL-------SPTGNLLFYDYMENGSLWDLLHGSLKKVKLDW 744
Query: 583 TQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP--LLAENAE 640
R+ A+G A+G+ +LH P + ++K ++ILLD+N A +S + + + A
Sbjct: 745 ETRLKIAVGAAQGLAYLHHDCTPRIIHRDIKSSNILLDENFEAHLSDFGIAKSIPASKTH 804
Query: 641 KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAV 700
+V+ G IDP + ++ EK DIY FG++LLE++ G+ K VD N Q +
Sbjct: 805 ASTYVLGTIGYIDPEYARTSRINEKSDIYSFGIVLLELLTGK-----KAVDNEANLHQLI 859
Query: 701 VT-ADESARRSMVDPAVNKACLDES-LKTMMEVCVRCLLKNPAERPSVEDV 749
++ AD++ VDP V C+D ++ ++ + C +NP ERP++ +V
Sbjct: 860 LSKADDNTVMEAVDPEVTVTCMDLGHIRKTFQLALLCTKRNPLERPTMLEV 910
|
|
| TAIR|locus:2203718 AT1G53440 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 370 (135.3 bits), Expect = 2.9e-52, Sum P(2) = 2.9e-52
Identities = 99/340 (29%), Positives = 169/340 (49%)
Query: 450 ISQTMKLGALGLPAYRTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCL 509
+ + +L L L +F+L++++ ATNNFD +GEG G +Y+G L +G +A++ L
Sbjct: 639 VDENEELRGLDLQT-GSFTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQL 697
Query: 510 KMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTL-R 568
K R F+ I +IS L+H +LV G C E + L++EY+ N +L R
Sbjct: 698 SSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEG-------KELLLVYEYLENNSLAR 750
Query: 569 SWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKIS 628
+ L W+ R IG+AKG+ +LH + ++K T++LLD +L AKIS
Sbjct: 751 ALFGTEKQRLHLDWSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKIS 810
Query: 629 SYNLPLL--AENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKS 686
+ L L EN + G + P + RG L +K D+Y FG++ LEI+ G+ +
Sbjct: 811 DFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTN 870
Query: 687 -RKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPS 745
R + + + A V ++ + +VDP + + + M+ + + C +P RP
Sbjct: 871 YRPKEEFIYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPP 930
Query: 746 VEDVLWNLQFAAQVQDAWHSQSSEGSPISPPR-PSRQHLS 784
+ V+ LQ +VQ + ++ S + R + +HLS
Sbjct: 931 MSSVVSMLQGKIKVQPPLVKREADPSGSAAMRFKALEHLS 970
|
|
| TAIR|locus:2019863 AT1G79620 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 415 (151.1 bits), Expect = 4.2e-52, Sum P(2) = 4.2e-52
Identities = 104/324 (32%), Positives = 174/324 (53%)
Query: 457 GALGLPAYRTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHS 516
GA L R FS EEL++ TNNF S+ +G G G++Y+G L++G VAI+ +
Sbjct: 616 GAPQLKGARWFSYEELKKITNNFSVSSELGYGGYGKVYKGMLQDGHMVAIKRAQQGSTQG 675
Query: 517 TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHA 576
F IEL+S++ H++LV +G CFE +I L++EY+ NG+L+ ++ G +
Sbjct: 676 GLEFKTEIELLSRVHHKNLVGLVGFCFE------QGEQI-LVYEYMSNGSLKDSLT-GRS 727
Query: 577 HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636
+L W +R+ A+G A+G+ +LH P + ++K T+ILLD+NL AK++ + L L
Sbjct: 728 GITLDWKRRLRVALGSARGLAYLHELADPPIIHRDVKSTNILLDENLTAKVADFGLSKLV 787
Query: 637 ENAEKVGHVIPYS----GSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRK--- 688
+ K GHV G +DP KL EK D+Y FG++++E+I + P++ K
Sbjct: 788 SDCTK-GHVSTQVKGTLGYLDPEYYTTQKLTEKSDVYSFGVVMMELITAKQPIEKGKYIV 846
Query: 689 -EVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVE 747
E+ L+ N+ D R +D ++ L ME+ ++C+ + ERP++
Sbjct: 847 REIKLVMNKSDD----DFYGLRDKMDRSLRDVGTLPELGRYMELALKCVDETADERPTMS 902
Query: 748 DVLWNLQFAAQVQDAWHSQSSEGS 771
+V+ ++ Q A S S+ S
Sbjct: 903 EVVKEIEIIIQNSGASSSSSASAS 926
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q8LFN2 | Y3037_ARATH | No assigned EC number | 0.6813 | 0.9325 | 0.9139 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 786 | |||
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 7e-42 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 6e-34 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 3e-28 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 9e-28 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 3e-19 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 1e-18 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 3e-18 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 9e-16 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 2e-15 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 5e-15 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 2e-14 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 2e-14 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 3e-14 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 3e-14 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 7e-14 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 9e-14 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 1e-13 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 3e-12 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 8e-12 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 9e-12 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 1e-11 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 1e-11 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 2e-11 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 8e-11 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 1e-10 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 3e-10 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 4e-10 | |
| cd06629 | 272 | cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o | 6e-10 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-09 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 1e-09 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 2e-09 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 3e-09 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 8e-09 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 1e-08 | |
| PHA02988 | 283 | PHA02988, PHA02988, hypothetical protein; Provisio | 4e-08 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 4e-08 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 6e-08 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 6e-08 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 8e-08 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 1e-07 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 1e-07 | |
| cd05089 | 297 | cd05089, PTKc_Tie1, Catalytic domain of the Protei | 1e-07 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 1e-07 | |
| cd05066 | 267 | cd05066, PTKc_EphR_A, Catalytic domain of the Prot | 2e-07 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 2e-07 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 3e-07 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 5e-07 | |
| cd05088 | 303 | cd05088, PTKc_Tie2, Catalytic domain of the Protei | 5e-07 | |
| cd08221 | 256 | cd08221, STKc_Nek9, Catalytic domain of the Protei | 5e-07 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 6e-07 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 6e-07 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 7e-07 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 7e-07 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 9e-07 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 1e-06 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 2e-06 | |
| cd05047 | 270 | cd05047, PTKc_Tie, Catalytic domain of Tie Protein | 2e-06 | |
| cd05065 | 269 | cd05065, PTKc_EphR_B, Catalytic domain of the Prot | 2e-06 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 5e-06 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 6e-06 | |
| cd05619 | 316 | cd05619, STKc_nPKC_theta, Catalytic domain of the | 6e-06 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 7e-06 | |
| cd05615 | 323 | cd05615, STKc_cPKC_alpha, Catalytic domain of the | 1e-05 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 1e-05 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 1e-05 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 2e-05 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 3e-05 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 4e-05 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 4e-05 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 4e-05 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 5e-05 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 7e-05 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 8e-05 | |
| cd06624 | 268 | cd06624, STKc_ASK, Catalytic domain of the Protein | 8e-05 | |
| cd06631 | 265 | cd06631, STKc_YSK4, Catalytic domain of the Protei | 9e-05 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 1e-04 | |
| cd06659 | 297 | cd06659, STKc_PAK6, Catalytic domain of the Protei | 1e-04 | |
| cd05580 | 290 | cd05580, STKc_PKA, Catalytic domain of the Protein | 1e-04 | |
| cd05097 | 295 | cd05097, PTKc_DDR_like, Catalytic domain of Discoi | 1e-04 | |
| cd06657 | 292 | cd06657, STKc_PAK4, Catalytic domain of the Protei | 2e-04 | |
| cd07861 | 285 | cd07861, STKc_CDK1_euk, Catalytic domain of the Se | 2e-04 | |
| cd06644 | 292 | cd06644, STKc_STK10_LOK, Catalytic domain of the P | 2e-04 | |
| cd05592 | 316 | cd05592, STKc_nPKC_theta_delta, Catalytic domain o | 2e-04 | |
| cd05587 | 324 | cd05587, STKc_cPKC, Catalytic domain of the Protei | 2e-04 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 3e-04 | |
| cd05036 | 277 | cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro | 3e-04 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 3e-04 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 3e-04 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 4e-04 | |
| cd05616 | 323 | cd05616, STKc_cPKC_beta, Catalytic domain of the P | 4e-04 | |
| cd05042 | 269 | cd05042, PTKc_Aatyk, Catalytic domain of the Prote | 5e-04 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 5e-04 | |
| cd05053 | 293 | cd05053, PTKc_FGFR, Catalytic domain of the Protei | 6e-04 | |
| cd07846 | 286 | cd07846, STKc_CDKL2_3, Catalytic domain of the Ser | 6e-04 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 7e-04 | |
| cd06628 | 267 | cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o | 8e-04 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 8e-04 | |
| cd07831 | 282 | cd07831, STKc_MOK, Catalytic domain of the Serine/ | 9e-04 | |
| cd06917 | 277 | cd06917, STKc_NAK1_like, Catalytic domain of Funga | 0.001 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 0.001 | |
| cd06641 | 277 | cd06641, STKc_MST3, Catalytic domain of the Protei | 0.001 | |
| cd06621 | 287 | cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of | 0.001 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 0.001 | |
| cd07845 | 309 | cd07845, STKc_CDK10, Catalytic domain of the Serin | 0.002 | |
| cd07843 | 293 | cd07843, STKc_CDC2L1, Catalytic domain of the Seri | 0.002 | |
| cd07836 | 284 | cd07836, STKc_Pho85, Catalytic domain of the Serin | 0.002 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 0.002 | |
| cd06647 | 293 | cd06647, STKc_PAK_I, Catalytic domain of the Prote | 0.002 | |
| cd05589 | 324 | cd05589, STKc_PKN, Catalytic domain of the Protein | 0.002 | |
| cd07829 | 282 | cd07829, STKc_CDK_like, Catalytic domain of Cyclin | 0.002 | |
| cd00116 | 319 | cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribo | 0.003 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 0.003 | |
| cd07864 | 302 | cd07864, STKc_CDK12, Catalytic domain of the Serin | 0.004 | |
| cd06655 | 296 | cd06655, STKc_PAK2, Catalytic domain of the Protei | 0.004 | |
| cd06658 | 292 | cd06658, STKc_PAK5, Catalytic domain of the Protei | 0.004 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 164 bits (417), Expect = 7e-42
Identities = 181/719 (25%), Positives = 309/719 (42%), Gaps = 121/719 (16%)
Query: 79 LHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNM 138
LH+ N +P++ L LP L+VL+L S G + + + ++L +L++
Sbjct: 313 LHLFSNNFTGKIPVA---------LTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDL 363
Query: 139 SSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDS 198
S+N L G IP+ L +L LIL N L G +P LG+ L + L++N F+G LP
Sbjct: 364 STNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSE 423
Query: 199 FSYLE------------------------NLRVLALSNNHFYGEVPDFSGLTYLQVLDLE 234
F+ L +L++L+L+ N F+G +PD G L+ LDL
Sbjct: 424 FTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLS 483
Query: 235 NNALGPQFP-KVGK--KLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQAL 291
N P K+G +L+ + LS+NK IP E+SS +L LDLS N+ G P +
Sbjct: 484 RNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASF 543
Query: 292 LSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYA 351
+P ++ L+++ N+L+G++ +L L V++S N L G LP+ + N +
Sbjct: 544 SEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAG 603
Query: 352 RNCLAAGNENQHPLSFCQNEALAVGILPLQKKQKQVSKAVLALSIIGGIIGGISLVVIAF 411
L G+ G+ P ++ +K S +G + L ++AF
Sbjct: 604 NIDLCGGDT-------------TSGLPPCKRVRKTPSWWFYITCTLGAFL---VLALVAF 647
Query: 412 LLV-RRTKSKQTMKKTPTRLIQENASTGYTSKFLSDARYISQTMKLGALGLPAYRTFSLE 470
V R ++ +K+ EN + +F S+ K + ++
Sbjct: 648 GFVFIRGRNNLELKRV------ENEDGTWELQFFD-----SKVSK----------SITIN 686
Query: 471 ELEEATNNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTRNFMHHIELISK 529
++ + + G +G Y+G+ +KNG ++ ++ +S + I + K
Sbjct: 687 DILSSLKE---ENVISRGKKGASYKGKSIKNGMQFVVK--EINDVNSIPS--SEIADMGK 739
Query: 530 LRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAA 589
L+H ++V +G C S +LI EY+ L + +L+W +R A
Sbjct: 740 LQHPNIVKLIGLC-------RSEKGAYLIHEYIEGKNLSEVLR------NLSWERRRKIA 786
Query: 590 IGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAK-ISSYNLPLLAENAEKVGHVIPY 648
IG+AK ++FLH P V NL I++D S L + +
Sbjct: 787 IGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLRLSLPGLLCTDTKCFIS----- 841
Query: 649 SGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTADESA 707
S + P + EK DIY FGLIL+E++ G+ P + V ++V E A
Sbjct: 842 SAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVH------GSIV---EWA 892
Query: 708 RRSM--------VDPAV--NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756
R +DP++ + + + +M + + C +P RP DVL L+ A
Sbjct: 893 RYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESA 951
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 139 bits (352), Expect = 6e-34
Identities = 107/385 (27%), Positives = 171/385 (44%), Gaps = 68/385 (17%)
Query: 8 SQCTLLVLAYILLQVNHSEQLQSSQAQTLLRIQGLLNNP-AVLSSWNITTEFCNTEPTSS 66
C L+ L +N L + + + LL + +N+P LS+WN + + C
Sbjct: 7 QHCPYLIFMLFFLFLN-FSMLHAEELELLLSFKSSINDPLKYLSNWNSSADVCLW----- 60
Query: 67 LTVVCYEES-ITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSG 125
+ C S + + + G + + + +LP ++ + L + L GP+
Sbjct: 61 QGITCNNSSRVVSIDLSGKNISGKISSAI---------FRLPYIQTINLSNNQLSGPIPD 111
Query: 126 KISRLSS-----------------------LEILNMSSNFLNGAIPQELSILTSLQTLIL 162
I SS LE L++S+N L+G IP ++ +SL+ L L
Sbjct: 112 DIFTTSSSLRYLNLSNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDL 171
Query: 163 DENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVP-D 221
N+L G++P+ L +L L L+L +N G +P +++L+ + L N+ GE+P +
Sbjct: 172 GGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYE 231
Query: 222 FSGLTYLQVLDL-ENNALGPQFPKVG--KKLVTMILSKNKFRSAIPAEVSSYYQLQRLDL 278
GLT L LDL NN GP +G K L + L +NK IP + S +L LDL
Sbjct: 232 IGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDL 291
Query: 279 S------------------------SNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDD 314
S SN F G P AL SLP + L + NK +G++ +
Sbjct: 292 SDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKN 351
Query: 315 LSCNPELGFVDLSSNLLTGQLPNCL 339
L + L +DLS+N LTG++P L
Sbjct: 352 LGKHNNLTVLDLSTNNLTGEIPEGL 376
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 121 bits (305), Expect = 3e-28
Identities = 88/252 (34%), Positives = 130/252 (51%), Gaps = 4/252 (1%)
Query: 109 LKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLA 168
LKVL L L G + ++ L+SLE L ++SN L G IP+EL + SL+ + L N L+
Sbjct: 166 LKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLS 225
Query: 169 GRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVP-DFSGLTY 227
G +P +G L L L L N G +P S L+NL+ L L N G +P L
Sbjct: 226 GEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQK 285
Query: 228 LQVLDLENNALGPQFPKV---GKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFV 284
L LDL +N+L + P++ + L + L N F IP ++S +LQ L L SN+F
Sbjct: 286 LISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFS 345
Query: 285 GPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSK 344
G P+ L ++T L+++ N LTG++ + L + L + L SN L G++P L A
Sbjct: 346 GEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRS 405
Query: 345 NRVVLYARNCLA 356
R V N +
Sbjct: 406 LRRVRLQDNSFS 417
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 119 bits (301), Expect = 9e-28
Identities = 85/273 (31%), Positives = 128/273 (46%), Gaps = 33/273 (12%)
Query: 104 VKLPDLKVLRLVSLG---LWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTL 160
+L +K L+ + LG L G + +I L+SL L++ N L G IP L L +LQ L
Sbjct: 206 RELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYL 265
Query: 161 ILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVP 220
L +N L+G +P + SL L L L +N +G +P+ L+NL +L L +N+F G++P
Sbjct: 266 FLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIP 325
Query: 221 D-FSGLTYLQVLDLENNALGPQFPK-VGKK--------------------------LVTM 252
+ L LQVL L +N + PK +GK L +
Sbjct: 326 VALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKL 385
Query: 253 ILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLF 312
IL N IP + + L+R+ L N F G P LP + +L+I++N L G++
Sbjct: 386 ILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRIN 445
Query: 313 DDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKN 345
P L + L+ N G LP+ GSK
Sbjct: 446 SRKWDMPSLQMLSLARNKFFGGLPD--SFGSKR 476
|
Length = 968 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 86.9 bits (216), Expect = 3e-19
Identities = 62/271 (22%), Positives = 114/271 (42%), Gaps = 66/271 (24%)
Query: 486 GEGSQGQMYRGRLKN-GTFVAIRCLKMKKCHSTRNFMHH-IELISKLRHRHLVSALGHCF 543
GEG G +Y R K G VAI+ +K + S + IE++ KL H ++V +
Sbjct: 2 GEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIV----KLY 57
Query: 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLH-TG 602
+ D++ ++L+ EY G+L+ + E L+ + + + + +G+++LH G
Sbjct: 58 GVFEDEN---HLYLVMEYCEGGSLKDLLKEN--EGKLSEDEILRILLQILEGLEYLHSNG 112
Query: 603 IVPGVFSNNLKITDILLDQ-NLVAKISSYNLPLLAENAEKVGHVIPYSGS-IDP-TNSAR 659
I+ +LK +ILLD N K++ + L L + + + I + + + P +
Sbjct: 113 IIHR----DLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGK 168
Query: 660 GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKA 719
G EK DI+ G+IL E+
Sbjct: 169 GYYSEKSDIWSLGVILYEL----------------------------------------- 187
Query: 720 CLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
LK ++ + L K+P +RPS +++L
Sbjct: 188 ---PELKDLIR---KMLQKDPEKRPSAKEIL 212
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 86.0 bits (214), Expect = 1e-18
Identities = 62/290 (21%), Positives = 114/290 (39%), Gaps = 73/290 (25%)
Query: 486 GEGSQGQMYRGRLKN-GTFVAIRCLKMKKCHSTR-NFMHHIELISKLRHRHLVSALGHCF 543
GEGS G++Y R K G VAI+ +K KK R + I+++ KL+H ++V +
Sbjct: 8 GEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIV----RLY 63
Query: 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLT--WTQRISAAIGVAKGIQFLHT 601
+ + D+ ++L+ EY G L + L+ + I +++LH+
Sbjct: 64 DVFEDEDK---LYLVMEYCEGGDLFDLL---KKRGRLSEDEARFYLRQI--LSALEYLHS 115
Query: 602 -GIV-----PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVI--------- 646
GIV P N ILLD++ K++ + L + EK+ +
Sbjct: 116 KGIVHRDLKP---EN------ILLDEDGHVKLADFGLARQLDPGEKLTTFVGTPEYMAPE 166
Query: 647 -----PYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQAV 700
Y +DI+ G+IL E++ G+P ++ L + +
Sbjct: 167 VLLGKGYGK--------------AVDIWSLGVILYELLTGKPPFPGDDQLLEL---FKKI 209
Query: 701 VTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
D + K ++ + L+K+P +R + E+ L
Sbjct: 210 GKPKPPFPPPEWD-------ISPEAKDLIR---KLLVKDPEKRLTAEEAL 249
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 85.0 bits (211), Expect = 3e-18
Identities = 65/288 (22%), Positives = 121/288 (42%), Gaps = 61/288 (21%)
Query: 485 MGEGSQGQMYRGRLKN-GTFVAIRCLKMKKCHSTRNFMHH--IELISKLRHRHLVSALGH 541
+G GS G +Y+ + K G VA++ LK + S ++ I ++ +L H ++V
Sbjct: 7 LGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIV----- 61
Query: 542 CFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHT 601
F+D ++L+ EY G L ++S L+ + A+ + +G+++LH
Sbjct: 62 RLIDAFEDKD--HLYLVMEYCEGGDLFDYLSR---GGPLSEDEAKKIALQILRGLEYLH- 115
Query: 602 GIVPGVFSNN-----LKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTN 656
SN LK +ILLD+N V KI+ + G S
Sbjct: 116 -------SNGIIHRDLKPENILLDENGVVKIADF------------GLAKKLLKSSSSLT 156
Query: 657 SARGKLE--------------EKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVT 702
+ G K+D++ G+IL E++ G+P S + + +QLQ +
Sbjct: 157 TFVGTPWYMAPEVLLGGNGYGPKVDVWSLGVILYELLTGKPPFSGENIL---DQLQLIR- 212
Query: 703 ADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
R ++ + ++ +CL K+P++RP+ E++L
Sbjct: 213 -----RILGPPLEFDEPKWSSGSEEAKDLIKKCLNKDPSKRPTAEEIL 255
|
Length = 260 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 77.6 bits (192), Expect = 9e-16
Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 27/154 (17%)
Query: 486 GEGSQGQMYRGRLKNG-----TFVAIRCLKMKKCHSTRN-FMHHIELISKLRHRHLVSAL 539
GEG+ G++Y+G LK VA++ LK F+ ++ KL H ++V L
Sbjct: 8 GEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNIVKLL 67
Query: 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFL 599
G C + + ++ EY+P G L ++ + + + L+ + +S A+ +A+G+++L
Sbjct: 68 GVC-------TEEEPLMIVMEYMPGGDLLDYLRK-NRPKELSLSDLLSFALQIARGMEYL 119
Query: 600 HTGIVPGVFSNN-----LKITDILLDQNLVAKIS 628
S N L + L+ +NLV KIS
Sbjct: 120 E--------SKNFIHRDLAARNCLVGENLVVKIS 145
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 76.8 bits (190), Expect = 2e-15
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 37/162 (22%)
Query: 486 GEGSQGQMYRGRLKNG----TFVAIRCLKMKKCHST---RNFMHHIELISKLRHRHLVSA 538
GEG+ G++Y+G+LK T VA++ LK + S ++F+ ++ KL H ++V
Sbjct: 4 GEGAFGEVYKGKLKGKDGKTTEVAVKTLK--EDASEEERKDFLKEARVMKKLGHPNVVRL 61
Query: 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISE------GHAHQSLTWTQRISAAIGV 592
LG C E ++L+ EY+ G L ++ + +L+ +S AI +
Sbjct: 62 LGVCTE-------EEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQI 114
Query: 593 AKGIQFLHT-GIVPGVFSNNLKITD-----ILLDQNLVAKIS 628
AKG+++L + V D L+ ++LV KIS
Sbjct: 115 AKGMEYLASKKFVHR---------DLAARNCLVGEDLVVKIS 147
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 75.5 bits (186), Expect = 5e-15
Identities = 72/283 (25%), Positives = 127/283 (44%), Gaps = 39/283 (13%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHST--RNFMHHIELISKLRHRH 534
A +G+G G + G + VA++CLK ST + F+ +++ LRH +
Sbjct: 6 KELKLGATIGKGEFGDVMLGDYRGQK-VAVKCLK---DDSTAAQAFLAEASVMTTLRHPN 61
Query: 535 LVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI-SEGHAHQSLTWTQRISAAIGVA 593
LV LG + ++++ EY+ G+L ++ S G A +T Q++ A+ V
Sbjct: 62 LVQLLGVVL----QGNP---LYIVTEYMAKGSLVDYLRSRGRAV--ITLAQQLGFALDVC 112
Query: 594 KGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHV-IPYSGSI 652
+G+++L +L ++L+ ++LVAK+S + L A + G + + ++
Sbjct: 113 EGMEYLEE---KNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVKWTA-- 167
Query: 653 DPTNSARGKLEEKIDIYDFGLILLEII-VGRPLKSRKEVDLLKNQLQAVVTADESARRSM 711
P K K D++ FG++L EI GR V + L+ VV E R M
Sbjct: 168 -PEALREKKFSTKSDVWSFGILLWEIYSFGR-------VPYPRIPLKDVVPHVEKGYR-M 218
Query: 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754
P + C E K M + C +PA+RP+ + + L
Sbjct: 219 EAP---EGCPPEVYKVMKD----CWELDPAKRPTFKQLREQLA 254
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 73.9 bits (181), Expect = 2e-14
Identities = 69/266 (25%), Positives = 123/266 (46%), Gaps = 31/266 (11%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G+G G+++ G T VAI+ LK F+ +++ KLRH LV
Sbjct: 14 LGQGCFGEVWMGTWNGTTKVAIKTLK-PGTMMPEAFLQEAQIMKKLRHDKLVP------- 65
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
+ S I+++ E++ G+L ++ EG + L Q + A +A G+ ++
Sbjct: 66 -LYAVVSEEPIYIVTEFMGKGSLLDFLKEGDG-KYLKLPQLVDMAAQIADGMAYIER--- 120
Query: 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGK 661
+L+ +IL+ NLV KI+ + L L E+ E + G P + P + G+
Sbjct: 121 MNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTA-PEAALYGR 179
Query: 662 LEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACL 721
K D++ FG++L E++ K R + N+ + + + R M P + C
Sbjct: 180 FTIKSDVWSFGILLTELVT----KGRVPYPGMVNR-EVLEQVERGYR--MPCP---QGC- 228
Query: 722 DESLKTMMEVCVRCLLKNPAERPSVE 747
ESL +M++C + K+P ERP+ E
Sbjct: 229 PESLHELMKLCWK---KDPDERPTFE 251
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 73.5 bits (180), Expect = 2e-14
Identities = 67/272 (24%), Positives = 122/272 (44%), Gaps = 43/272 (15%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G G G+++ G T VA++ LK S +F+ +++ KLRH LV +
Sbjct: 14 LGNGQFGEVWMGTWNGNTKVAVKTLK-PGTMSPESFLEEAQIMKKLRHDKLV-------Q 65
Query: 545 CYFDDSSVSR--IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTG 602
Y + VS I+++ EY+ G+L ++ +G ++L + A VA G+ ++
Sbjct: 66 LY---AVVSEEPIYIVTEYMSKGSLLDFLKDGEG-RALKLPNLVDMAAQVAAGMAYIER- 120
Query: 603 IVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSAR 659
+L+ +IL+ LV KI+ + L L E+ E + G P + P +
Sbjct: 121 --MNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTA-PEAALY 177
Query: 660 GKLEEKIDIYDFGLILLEIIV-GR---PLKSRKEVDLLKNQLQAVVTADESARRSMVDPA 715
G+ K D++ FG++L E++ GR P + +EV V+
Sbjct: 178 GRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREV------------------LEQVERG 219
Query: 716 VNKACLDESLKTMMEVCVRCLLKNPAERPSVE 747
C + ++ E+ ++C K+P ERP+ E
Sbjct: 220 YRMPCPQDCPISLHELMLQCWKKDPEERPTFE 251
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 75.2 bits (183), Expect = 3e-14
Identities = 52/287 (18%), Positives = 113/287 (39%), Gaps = 28/287 (9%)
Query: 478 NFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLK---MKKCHSTRNFMHHIELISKLRHRH 534
++ +GEGS G++Y R + VA++ L K F+ I++++ L H
Sbjct: 1 SYRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPP 58
Query: 535 LVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAK 594
+ L F+ ++L+ EYV G+L + + L+ ++ + +
Sbjct: 59 NIVKLYDFFQDE------GSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILS 112
Query: 595 GIQFLHTGIVPGVFSNNLKITDILLDQNL-VAKISSYNLPLLAENAEKVGHVIPYSGSID 653
+++LH+ G+ ++K +ILLD++ V K+ + L L + + +
Sbjct: 113 ALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSV 169
Query: 654 PT----------NSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTA 703
T + DI+ G+ L E++ G P ++ +Q ++
Sbjct: 170 GTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILE 229
Query: 704 DESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
+ + ++ + + K ++ + L K+P R S L
Sbjct: 230 LPT---PSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDL 273
|
Length = 384 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 73.5 bits (180), Expect = 3e-14
Identities = 66/270 (24%), Positives = 118/270 (43%), Gaps = 39/270 (14%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G+G G+++ G T VAI+ LK S F+ +++ KLRH LV
Sbjct: 14 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ------- 65
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
+ S I+++ EY+ G+L ++ +G + L Q + A +A G+ ++
Sbjct: 66 -LYAVVSEEPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVER--- 120
Query: 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGK 661
+L+ +IL+ +NLV K++ + L L E+ E + G P + P + G+
Sbjct: 121 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTA-PEAALYGR 179
Query: 662 LEEKIDIYDFGLILLEIIV-GR---PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVN 717
K D++ FG++L E+ GR P +EV V+
Sbjct: 180 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREV------------------LDQVERGYR 221
Query: 718 KACLDESLKTMMEVCVRCLLKNPAERPSVE 747
C E +++ ++ +C K P ERP+ E
Sbjct: 222 MPCPPECPESLHDLMCQCWRKEPEERPTFE 251
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 72.1 bits (177), Expect = 7e-14
Identities = 73/271 (26%), Positives = 118/271 (43%), Gaps = 44/271 (16%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G G G+++ G KN VAI+ LK ++F ++ + +LRH+HL+S C
Sbjct: 14 LGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVC-- 71
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWI--SEGHAHQSLTWTQRISAAIGVAKGIQFLHTG 602
S +++I E + G+L +++ EG Q L I A VA+G+ +L
Sbjct: 72 -----SVGEPVYIITELMEKGSLLAFLRSPEG---QVLPVASLIDMACQVAEGMAYLEE- 122
Query: 603 IVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKV----GHVIPYSGSIDPTNSA 658
+L +IL+ ++LV K++ + L L + E V IPY + P ++
Sbjct: 123 --QNSIHRDLAARNILVGEDLVCKVADFGLARLIK--EDVYLSSDKKIPYKWTA-PEAAS 177
Query: 659 RGKLEEKIDIYDFGLILLEII----VGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDP 714
G K D++ FG++L E+ V P + EV + R M P
Sbjct: 178 HGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEV------YDQI---TAGYR--MPCP 226
Query: 715 AVNKACLDESLKTMMEVCVRCLLKNPAERPS 745
A C E K M+E C P +RPS
Sbjct: 227 A---KCPQEIYKIMLE----CWAAEPEDRPS 250
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 71.8 bits (177), Expect = 9e-14
Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 34/157 (21%)
Query: 486 GEGSQGQMYRGRLKNGTF-----VAIRCLKMKKCHSTRN----FMHHIELISKLRHRHLV 536
GEG+ G++Y+G+LK VA+ K K ++ F+ ++ KL H ++V
Sbjct: 8 GEGAFGEVYKGKLKGKGGKKKVEVAV---KTLKEDASEQQIEEFLREARIMRKLDHPNVV 64
Query: 537 SALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGI 596
LG C + ++++ EY+ G L S++ + L+ + +S A+ +A+G+
Sbjct: 65 KLLGVC-------TEEEPLYIVMEYMEGGDLLSYLRK--NRPKLSLSDLLSFALQIARGM 115
Query: 597 QFLHTGIVPGVFSNN-----LKITDILLDQNLVAKIS 628
++L S N L + L+ +NLV KIS
Sbjct: 116 EYLE--------SKNFIHRDLAARNCLVGENLVVKIS 144
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 71.0 bits (175), Expect = 1e-13
Identities = 45/155 (29%), Positives = 74/155 (47%), Gaps = 30/155 (19%)
Query: 486 GEGSQGQMYRGRLK-----NGTFVAIRCLKMKKCHSTR-NFMHHIELISKLRHRHLVSAL 539
GEG+ G++Y+G LK T VA++ LK R F+ ++ KL H ++V L
Sbjct: 8 GEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVRLL 67
Query: 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAH-QSLTWTQRISAAIGVAKGIQF 598
G C + + ++++ EY+P G L ++ H + LT + A+ +AKG+++
Sbjct: 68 GVCTQ---GEP----LYIVTEYMPGGDLLDFL---RKHGEKLTLKDLLQMALQIAKGMEY 117
Query: 599 LHTGIVPGVFSNNLKITD-----ILLDQNLVAKIS 628
L S N D L+ +NLV KIS
Sbjct: 118 LE--------SKNFVHRDLAARNCLVTENLVVKIS 144
|
Length = 258 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 69.5 bits (170), Expect = 3e-12
Identities = 35/85 (41%), Positives = 50/85 (58%)
Query: 136 LNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTL 195
L + + L G IP ++S L LQ++ L N + G +P LGS+ L VL L N FNG++
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 196 PDSFSYLENLRVLALSNNHFYGEVP 220
P+S L +LR+L L+ N G VP
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVP 507
|
Length = 623 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 66.1 bits (162), Expect = 8e-12
Identities = 63/301 (20%), Positives = 114/301 (37%), Gaps = 74/301 (24%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLR---- 531
++ + +G+GS G +Y+ R K G A +KK H + +L+ +L+
Sbjct: 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYA-----LKKIHVDGDEEFRKQLLRELKTLRS 55
Query: 532 --HRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAA 589
++V C+ ++ + +S ++ EY+ G+L + + + + A
Sbjct: 56 CESPYVVK----CYGAFYKEGEIS---IVLEYMDGGSLADLLKK-----VGKIPEPVLAY 103
Query: 590 IG--VAKGIQFLHTG-------IVPGVFSNNLKITDILLDQNLVAKIS----SYNLP-LL 635
I + KG+ +LHT I P SN +L++ KI+ S L L
Sbjct: 104 IARQILKGLDYLHTKRHIIHRDIKP---SN------LLINSKGEVKIADFGISKVLENTL 154
Query: 636 AENAEKVGHVIPYS-----GSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKE 689
+ VG V S G + DI+ GL LLE +G+ P +
Sbjct: 155 DQCNTFVGTVTYMSPERIQGESYSYAA---------DIWSLGLTLLECALGKFPFLPPGQ 205
Query: 690 VDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDV 749
+QA+ P++ + + CL K+P +RPS ++
Sbjct: 206 PSFF-ELMQAICDGP--------PPSLPAEEFSPEFRDFIS---ACLQKDPKKRPSAAEL 253
Query: 750 L 750
L
Sbjct: 254 L 254
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 65.8 bits (161), Expect = 9e-12
Identities = 74/273 (27%), Positives = 121/273 (44%), Gaps = 44/273 (16%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G G G+++ G T VA++ LK S F+ +++ KLRH LV C
Sbjct: 14 LGAGQFGEVWMGTWNGTTKVAVKTLKPGTM-SPEAFLQEAQIMKKLRHDKLVQLYAVC-- 70
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
S I+++ EY+ G+L ++ G + L Q + A +A+G+ +L +
Sbjct: 71 -----SEEEPIYIVTEYMSKGSLLDFLKSGEGKK-LRLPQLVDMAAQIAEGMAYLES--- 121
Query: 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGS------IDPTNSA 658
+L +IL+ +NLV KI+ + L L E+ E G+ P +
Sbjct: 122 RNYIHRDLAARNILVGENLVCKIADFGLARLIEDDE----YTAREGAKFPIKWTAPEAAN 177
Query: 659 RGKLEEKIDIYDFGLILLEIIV-GR---PLKSRKEVDLLKNQLQAVVTADESARRSMVDP 714
G+ K D++ FG++L EI+ GR P + +EV L+ V E R M P
Sbjct: 178 YGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREV------LEQV----ERGYR-MPRP 226
Query: 715 AVNKACLDESLKTMMEVCVRCLLKNPAERPSVE 747
C +E M++ C K+P ERP+ E
Sbjct: 227 P---NCPEELYDLMLQ----CWDKDPEERPTFE 252
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 65.7 bits (161), Expect = 1e-11
Identities = 63/283 (22%), Positives = 119/283 (42%), Gaps = 54/283 (19%)
Query: 486 GEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHST--RNFMHHIELISKLRHRHLVSALGHC 542
G GS G +Y K G +A++ +++ I ++S L+H ++V G
Sbjct: 9 GRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSE 68
Query: 543 FECYFDDSSVSRIFLIFEYVPNGTLRSWI-SEGHAHQSLT--WTQRISAAIGVAKGIQFL 599
+ ++ + IFL EYV G+L S + G + + +T++I +G+ +L
Sbjct: 69 RD---EEKNTLNIFL--EYVSGGSLSSLLKKFGKLPEPVIRKYTRQI------LEGLAYL 117
Query: 600 HT-GIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGS------- 651
H+ GIV ++K +IL+D + V K++ + + E G+
Sbjct: 118 HSNGIVHR----DIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPE 173
Query: 652 -IDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQA---VVTADESA 707
I R DI+ G ++E+ G+P S L N + A + ++ E
Sbjct: 174 VIRGEEYGR-----AADIWSLGCTVIEMATGKPPWSE-----LGNPMAALYKIGSSGEP- 222
Query: 708 RRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
P + L E K + +CL ++P +RP+ +++L
Sbjct: 223 ------PEI-PEHLSEEAKDFLR---KCLRRDPKKRPTADELL 255
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 65.3 bits (159), Expect = 1e-11
Identities = 70/270 (25%), Positives = 119/270 (44%), Gaps = 39/270 (14%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G G G+++ G T VAI+ LK + S F+ L+ +L+H LV
Sbjct: 14 LGAGQFGEVWMGYYNGHTKVAIKSLK-QGSMSPEAFLAEANLMKQLQHPRLVRLY----- 67
Query: 545 CYFDDSSVSR--IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTG 602
+ V++ I++I EY+ NG+L ++ + LT + I A +A+G+ F+
Sbjct: 68 -----AVVTQEPIYIITEYMENGSLVDFLKTPEGIK-LTINKLIDMAAQIAEGMAFIE-- 119
Query: 603 IVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSAR 659
+L+ +IL+ + L KI+ + L L E+ E + G P + P
Sbjct: 120 -RKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTA-PEAINY 177
Query: 660 GKLEEKIDIYDFGLILLEIIV-GR-PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVN 717
G K D++ FG++L EI+ GR P ++++N E R M P
Sbjct: 178 GTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNL--------ERGYR-MPRP--- 225
Query: 718 KACLDESLKTMMEVCVRCLLKNPAERPSVE 747
C +E + E+ C + P ERP+ E
Sbjct: 226 DNCPEE----LYELMRLCWKEKPEERPTFE 251
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 67.1 bits (164), Expect = 2e-11
Identities = 33/87 (37%), Positives = 49/87 (56%)
Query: 112 LRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRV 171
L L + GL G + IS+L L+ +N+S N + G IP L +TSL+ L L N G +
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 172 PDWLGSLPILAVLSLRNNMFNGTLPDS 198
P+ LG L L +L+L N +G +P +
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVPAA 509
|
Length = 623 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 65.2 bits (159), Expect = 8e-11
Identities = 30/79 (37%), Positives = 47/79 (59%)
Query: 102 TLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLI 161
+ KL L+ + L + G + + ++SLE+L++S N NG+IP+ L LTSL+ L
Sbjct: 437 DISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILN 496
Query: 162 LDENMLAGRVPDWLGSLPI 180
L+ N L+GRVP LG +
Sbjct: 497 LNGNSLSGRVPAALGGRLL 515
|
Length = 623 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 62.5 bits (152), Expect = 1e-10
Identities = 48/221 (21%), Positives = 91/221 (41%), Gaps = 43/221 (19%)
Query: 485 MGEGSQGQMYRGRLKNG------TFVAIRCLK-MKKCHSTRNFMHHIELISKLRHRHLVS 537
+GEG+ G+++ G + VA++ LK + ++F EL++ +H ++V
Sbjct: 13 LGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVK 72
Query: 538 ALGHCFECYFDDSSVSRIFLIFEYVPNGTL-----------RSWISEGHAHQSLTWTQRI 586
G C E ++FEY+ +G L S LT +Q +
Sbjct: 73 FYGVCTEG-------DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLL 125
Query: 587 SAAIGVAKGI------QFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP--LLAEN 638
A+ +A G+ F+H +L + L+ +LV KI + + + +
Sbjct: 126 QIAVQIASGMVYLASQHFVH---------RDLATRNCLVGYDLVVKIGDFGMSRDVYTTD 176
Query: 639 AEKV-GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEI 678
+V GH + + P + K + D++ FG++L EI
Sbjct: 177 YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEI 217
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 61.1 bits (149), Expect = 3e-10
Identities = 59/275 (21%), Positives = 117/275 (42%), Gaps = 44/275 (16%)
Query: 486 GEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
G+G G++Y+ R + G VAI+ +K++ ++ I+++ K +H ++V G
Sbjct: 9 GKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYG---- 64
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISA-AIGVAKGIQFLHT-G 602
Y ++++ E+ G+L+ + +Q+LT +Q I+ + KG+++LH+ G
Sbjct: 65 SYLKK---DELWIVMEFCSGGSLKDLLK--STNQTLTESQ-IAYVCKELLKGLEYLHSNG 118
Query: 603 IVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGS---IDPTNSAR 659
I+ ++K +ILL + K+ + L+ G+ + P
Sbjct: 119 IIHR----DIKAANILLTSDGEVKLIDFG---LSAQLSDTKARNTMVGTPYWMAPEVING 171
Query: 660 GKLEEKIDIYDFGLILLEIIVGRP----LKSRKEVDLLKNQLQAVVTADESARRSMVDPA 715
+ K DI+ G+ +E+ G+P L K + A
Sbjct: 172 KPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFK---------IATNGP---PGLR- 218
Query: 716 VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
N + K ++ +CL KNP +RP+ E +L
Sbjct: 219 -NPEKWSDEFKDFLK---KCLQKNPEKRPTAEQLL 249
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 60.9 bits (148), Expect = 4e-10
Identities = 61/281 (21%), Positives = 110/281 (39%), Gaps = 38/281 (13%)
Query: 478 NFDTSAFMGEGSQGQMYR-GRLKNGTFVA-----IRCLKMKKCHSTRNFMHHIELISKLR 531
+F +G+GS G +Y+ RL + F A + + K+ N I +++ +
Sbjct: 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVN---EIRILASVN 57
Query: 532 HRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRI-SAAI 590
H +++ ++ F D + ++ ++ EY P G L IS+ + L Q I I
Sbjct: 58 HPNII-----SYKEAFLDGN--KLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFI 110
Query: 591 GVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP-LLAENAEKVGHVIPYS 649
+ +G+Q LH + +LK +ILL N + KI + +L +N K P+
Sbjct: 111 QLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKTQIGTPHY 167
Query: 650 GSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709
+ P K DI+ G +L E+ P + + L+ ++Q R
Sbjct: 168 MA--PEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQ----------R 215
Query: 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
P D + L P RP+ + +L
Sbjct: 216 GKYPPIPPIYSQD-----LQNFIRSMLQVKPKLRPNCDKIL 251
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 60.6 bits (147), Expect = 6e-10
Identities = 64/285 (22%), Positives = 124/285 (43%), Gaps = 45/285 (15%)
Query: 485 MGEGSQGQMYRG-RLKNGTFVAIRCLKMKKCHSTRN----------FMHHIELISKLRHR 533
+G+G+ G++Y + G +A++ +++ + R+ IE + L H
Sbjct: 9 IGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHL 68
Query: 534 HLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISE-GHAHQSLT--WTQRISAAI 590
++V LG FE + S IFL EYVP G++ S + G + L +T++
Sbjct: 69 NIVQYLG--FETTEEYLS---IFL--EYVPGGSIGSCLRTYGRFEEQLVRFFTEQ----- 116
Query: 591 GVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSG 650
V +G+ +LH+ G+ +LK ++L+D + + KIS + + +++ + G
Sbjct: 117 -VLEGLAYLHS---KGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQG 172
Query: 651 SI-----DPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADE 705
S+ + +S K+DI+ G ++LE+ GR S +E + A+
Sbjct: 173 SVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEE------AIAAMFKLGN 226
Query: 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
+ P V+ +L + C NP RP+ ++L
Sbjct: 227 KRSAPPIPPDVSMNLSPVALDFLNA----CFTINPDNRPTARELL 267
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 61.8 bits (150), Expect = 1e-09
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 207 VLALSNNHFYGEV-PDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPA 265
+ LS + G++ L Y+Q ++L NN L P + F ++
Sbjct: 73 SIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPD------------DIFTTS--- 117
Query: 266 EVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVD 325
L+ L+LS+N F G P+ S+P++ L++++N L+G++ +D+ L +D
Sbjct: 118 -----SSLRYLNLSNNNFTGSIPRG--SIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLD 170
Query: 326 LSSNLLTGQLPNCLLAGSKNRVVLYARNCLAAG 358
L N+L G++PN L + + A N L
Sbjct: 171 LGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQ 203
|
Length = 968 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 59.5 bits (145), Expect = 1e-09
Identities = 64/313 (20%), Positives = 125/313 (39%), Gaps = 86/313 (27%)
Query: 486 GEGSQGQMYRGR-LKNGTFVAIRCLKMK--KCHSTRNFMHHIELISKLRHRHLVSALGHC 542
GEG+ GQ+Y+ R K G VA++ ++M+ K + I+L+ KLRH ++V
Sbjct: 8 GEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIV 67
Query: 543 FECYFDDSSVSRIFLIFEYVP---NGTLRS---WISEGH----AHQSLTWTQRISAAIGV 592
I+++FEY+ G L S +E Q L
Sbjct: 68 TSKGKGS-----IYMVFEYMDHDLTGLLDSPEVKFTESQIKCYMKQLL------------ 110
Query: 593 AKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYS--- 649
+G+Q+LH+ G+ ++K ++IL++ + V K++ + LA K Y+
Sbjct: 111 -EGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFG---LARPYTKRNSA-DYTNRV 162
Query: 650 ------------GSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRP-LKSRKEVDLLK-- 694
G+ ++D++ G IL E+ +G+P + E++ L+
Sbjct: 163 ITLWYRPPELLLGATRYG--------PEVDMWSVGCILAELFLGKPIFQGSTELEQLEKI 214
Query: 695 ---------------NQLQ--AVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLL 737
++L + + +R + + K +D S +++ + L
Sbjct: 215 FELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLRE--FFKHLIDPSA---LDLLDKLLT 269
Query: 738 KNPAERPSVEDVL 750
+P +R S + L
Sbjct: 270 LDPKKRISADQAL 282
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 58.6 bits (142), Expect = 2e-09
Identities = 71/282 (25%), Positives = 128/282 (45%), Gaps = 48/282 (17%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLK---MKKCHSTRNFMHHIELISKLRHRHLVSALGH 541
+G G G+++ G N T VA++ LK M ++F+ +++ KLRH L+
Sbjct: 14 LGAGQFGEVWEGLWNNTTPVAVKTLKPGTM----DPKDFLAEAQIMKKLRHPKLIQLYAV 69
Query: 542 CFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFL-- 599
C + I+++ E + G+L ++ +G A ++L Q I A VA G+ +L
Sbjct: 70 C-------TLEEPIYIVTELMKYGSLLEYL-QGGAGRALKLPQLIDMAAQVASGMAYLEA 121
Query: 600 HTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP-LLAEN--AEKVGHVIPYSGSIDPTN 656
I +L ++L+ +N + K++ + L ++ E+ + G P + P
Sbjct: 122 QNYI-----HRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTA-PEA 175
Query: 657 SARGKLEEKIDIYDFGLILLEIIV-GR---PLKSRKEVDLLKNQLQAVVTADESARRSMV 712
+ + K D++ FG++L EI+ GR P + EV LQ V D+ R M
Sbjct: 176 ALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEV------LQQV---DQGYR--MP 224
Query: 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754
P C E M++ C ++P +RP+ E + W L+
Sbjct: 225 CPP---GCPKELYDIMLD----CWKEDPDDRPTFETLQWKLE 259
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 58.5 bits (141), Expect = 3e-09
Identities = 49/213 (23%), Positives = 98/213 (46%), Gaps = 29/213 (13%)
Query: 485 MGEGSQGQMYRGRLKN------GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSA 538
+GEG+ G+++ N VA++ LK ++ ++F EL++ L+H H+V
Sbjct: 13 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 72
Query: 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI----------SEGHAHQSLTWTQRISA 588
G C E + ++FEY+ +G L ++ +EG+ LT +Q +
Sbjct: 73 YGVCVEG-------DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHI 125
Query: 589 AIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP--LLAENAEKV-GHV 645
A +A G+ +L + +L + L+ +NL+ KI + + + + + +V GH
Sbjct: 126 AQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHT 182
Query: 646 IPYSGSIDPTNSARGKLEEKIDIYDFGLILLEI 678
+ + P + K + D++ G++L EI
Sbjct: 183 MLPIRWMPPESIMYRKFTTESDVWSLGVVLWEI 215
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 57.1 bits (138), Expect = 8e-09
Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 35/218 (16%)
Query: 485 MGEGSQGQMYRGRL------KNGTFVAIRCLKMKKCHSTRN-FMHHIELISKLRHRHLVS 537
+GEG+ G++Y+G L + T VAI+ LK + F EL+S L+H ++V
Sbjct: 13 LGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVC 72
Query: 538 ALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI-------------SEGHAHQSLTWTQ 584
LG C + + ++FEY+ +G L ++ + SL +
Sbjct: 73 LLGVCTK----EQPTC---MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSD 125
Query: 585 RISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE--KV 642
+ AI +A G+++L + +L + L+ + L KIS + L +A+ +V
Sbjct: 126 FLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRV 182
Query: 643 GH--VIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEI 678
++P + P GK + DI+ FG++L EI
Sbjct: 183 QSKSLLPVRW-MPPEAILYGKFTTESDIWSFGVVLWEI 219
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 56.2 bits (136), Expect = 1e-08
Identities = 50/204 (24%), Positives = 90/204 (44%), Gaps = 22/204 (10%)
Query: 485 MGEGSQGQMYRGRL----KNGTFVAIRCLKMKKCHSTR-NFMHHIELISKLRHRHLVSAL 539
+G G G++ RGRL K VAI+ LK R +F+ ++ + H +++
Sbjct: 12 IGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLE 71
Query: 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFL 599
G + + +I EY+ NG+L ++ T Q + G+A G+++L
Sbjct: 72 GVV-------TKSRPVMIITEYMENGSLDKFLR--ENDGKFTVGQLVGMLRGIASGMKYL 122
Query: 600 HTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKV----GHVIPYSGSIDPT 655
+L +IL++ NLV K+S + L E++E G IP + P
Sbjct: 123 SE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTA-PE 178
Query: 656 NSARGKLEEKIDIYDFGLILLEII 679
A K D++ FG+++ E++
Sbjct: 179 AIAYRKFTSASDVWSFGIVMWEVM 202
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 55.1 bits (133), Expect = 4e-08
Identities = 59/280 (21%), Positives = 108/280 (38%), Gaps = 46/280 (16%)
Query: 487 EGSQGQMYRGRLKNGTFVAIRCLK-MKKCHST--RNFMHHIELISKLRHRHLVSALGHCF 543
E Q +Y+G N V IR K K H + I+ + ++ +++ G
Sbjct: 30 ENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYG--- 85
Query: 544 ECYFDDSSVS--RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHT 601
+ D R+ LI EY G LR + + + L++ ++ AI KG+ L+
Sbjct: 86 --FIIDIVDDLPRLSLILEYCTRGYLREVLDK---EKDLSFKTKLDMAIDCCKGLYNLYK 140
Query: 602 GIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSG-------SIDP 654
NL L+ +N KI + L EK+ P+ S
Sbjct: 141 YT--NKPYKNLTSVSFLVTENYKLKIICHGL-------EKILSSPPFKNVNFMVYFSYKM 191
Query: 655 TNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTADESARRSMVD 713
N + K DIY G++L EI G+ P ++ ++ ++ + S + +
Sbjct: 192 LNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDL----IINKNNSLKLPLDC 247
Query: 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNL 753
P K ++ C + +RP+++++L+NL
Sbjct: 248 PLEIKCIVE-----------ACTSHDSIKRPNIKEILYNL 276
|
Length = 283 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 54.7 bits (132), Expect = 4e-08
Identities = 62/281 (22%), Positives = 114/281 (40%), Gaps = 48/281 (17%)
Query: 484 FMGEGSQGQMYRG-RLKNGTFVAIRCLKMKKCHST-----RNFMHHIELISKLRHRHLVS 537
+G GS G +Y G L +G F A++ + + T + I L+SKL+H ++V
Sbjct: 7 LLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQ 66
Query: 538 ALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQ 597
LG + +++ E VP G+L + + + S + G++
Sbjct: 67 YLG-------TEREEDNLYIFLELVPGGSLAKLLKK---YGSFPEPVIRLYTRQILLGLE 116
Query: 598 FLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGS------ 651
+LH ++K +IL+D N V K++ + + A+ + + GS
Sbjct: 117 YLHDR---NTVHRDIKGANILVDTNGVVKLADFGM---AKQVVEFSFAKSFKGSPYWMAP 170
Query: 652 --IDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709
I DI+ G +LE+ G+P S+ E + AV R
Sbjct: 171 EVIAQQGG----YGLAADIWSLGCTVLEMATGKPPWSQLE------GVAAVFKIG----R 216
Query: 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
S P + DE+ ++ +CL ++P+ RP+ ++L
Sbjct: 217 SKELPPIPDHLSDEAKDFIL----KCLQRDPSLRPTAAELL 253
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 56.0 bits (135), Expect = 6e-08
Identities = 35/124 (28%), Positives = 48/124 (38%), Gaps = 23/124 (18%)
Query: 184 LSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVP-DFSGLTYLQVLDLENNALGPQF 242
L L N G +P+ S L +L+ + LS N G +P +T L+VLDL
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDL--------- 473
Query: 243 PKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLP-SITYLN 301
S N F +IP + L+ L+L+ N G P AL N
Sbjct: 474 ------------SYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFN 521
Query: 302 IADN 305
DN
Sbjct: 522 FTDN 525
|
Length = 623 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 54.6 bits (131), Expect = 6e-08
Identities = 52/216 (24%), Positives = 97/216 (44%), Gaps = 33/216 (15%)
Query: 485 MGEGSQGQMYRGRLKN------GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSA 538
+GEG+ G+++ N VA++ LK + ++F EL++ L+H+H+V
Sbjct: 13 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRF 72
Query: 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI------------SEGHAHQSLTWTQRI 586
G C E + ++FEY+ +G L ++ E A LT Q +
Sbjct: 73 YGVCTEG-------RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQML 125
Query: 587 SAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP--LLAENAEKVG- 643
+ A +A G+ +L + +L + L+ Q LV KI + + + + + +VG
Sbjct: 126 AIASQIASGMVYLAS---LHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGG 182
Query: 644 -HVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEI 678
++P + P + K + DI+ FG++L EI
Sbjct: 183 RTMLPIRW-MPPESILYRKFTTESDIWSFGVVLWEI 217
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 53.9 bits (129), Expect = 8e-08
Identities = 58/268 (21%), Positives = 116/268 (43%), Gaps = 34/268 (12%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G G G+++ G N T VA++ LK S + F+ L+ L+H LV
Sbjct: 14 LGAGQFGEVWMGYYNNSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLV-------R 65
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
Y + I++I EY+ G+L ++ + + + I + +A+G+ ++
Sbjct: 66 LYAVVTKEEPIYIITEYMAKGSLLDFL-KSDEGGKVLLPKLIDFSAQIAEGMAYIER--- 121
Query: 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGK 661
+L+ ++L+ ++L+ KI+ + L + E+ E + G P + P G
Sbjct: 122 KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTA-PEAINFGS 180
Query: 662 LEEKIDIYDFGLILLEIIV-GR-PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKA 719
K D++ FG++L EI+ G+ P D++ + +R P + +
Sbjct: 181 FTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMS-----------ALQRGYRMPRM-EN 228
Query: 720 CLDESLKTMMEVCVRCLLKNPAERPSVE 747
C DE + ++ C + ERP+ +
Sbjct: 229 CPDE----LYDIMKTCWKEKAEERPTFD 252
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 54.8 bits (132), Expect = 1e-07
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 231 LDLENNALGPQFPK---VGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPF 287
L L+N L P + L ++ LS N R IP + S L+ LDLS N F G
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 288 PQALLSLPSITYLNIADNKLTGKL 311
P++L L S+ LN+ N L+G++
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRV 506
|
Length = 623 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 53.3 bits (128), Expect = 1e-07
Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 25/201 (12%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G G G + G+ + VAI+ +K + S F+ +++ KL H LV G C
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMKLSHEKLVQLYGVC-- 68
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAH----QSLTWTQRISAAIGVAKGIQFLH 600
+ I+++ EY+ NG L +++ E Q L + + + + QF+H
Sbjct: 69 -----TKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIH 123
Query: 601 TGIVPGVFSNNLKITDILLDQNLVAKISSYNLP---LLAENAEKVGHVIPYSGSIDPTNS 657
+L + L+D K+S + L L E VG P S P
Sbjct: 124 ---------RDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWS-PPEVL 173
Query: 658 ARGKLEEKIDIYDFGLILLEI 678
K K D++ FG+++ E+
Sbjct: 174 LYSKFSSKSDVWAFGVLMWEV 194
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Score = 53.9 bits (129), Expect = 1e-07
Identities = 70/301 (23%), Positives = 122/301 (40%), Gaps = 50/301 (16%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHST----RNFMHHIELISKL-RHRHLVSAL 539
+GEG+ GQ+ R +K +KM K ++ R+F +E++ KL H ++++ L
Sbjct: 10 IGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLL 69
Query: 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI-------------SEGHAHQSLTWTQRI 586
G C + +++ EY P G L ++ E +LT Q +
Sbjct: 70 GAC-------ENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLL 122
Query: 587 SAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEK--VGH 644
A VA G+Q+L +L ++L+ +NL +KI+ + L E K +G
Sbjct: 123 QFASDVATGMQYLSE---KQFIHRDLAARNVLVGENLASKIADFGLSRGEEVYVKKTMGR 179
Query: 645 VIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV--GRPLKSRKEVDLLKNQLQAVVT 702
+ +I+ N + K D++ FG++L EI+ G P +L + Q
Sbjct: 180 LPVRWMAIESLNYS--VYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY-- 235
Query: 703 ADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDA 762
M P + C DE + M + C P ERP + L + + A
Sbjct: 236 -------RMEKP---RNCDDEVYELMRQ----CWRDRPYERPPFAQISVQLSRMLEARKA 281
Query: 763 W 763
+
Sbjct: 282 Y 282
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 53.9 bits (129), Expect = 1e-07
Identities = 58/287 (20%), Positives = 121/287 (42%), Gaps = 46/287 (16%)
Query: 485 MGEGSQGQMYRGR------LKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSA 538
+GEG+ G+++ K+ VA++ LK + ++F EL++ L+H H+V
Sbjct: 13 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 72
Query: 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWIS----------EGHAHQS---LTWTQR 585
G C + + ++FEY+ +G L ++ +G Q+ L +Q
Sbjct: 73 YGVCGDG-------DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQM 125
Query: 586 ISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP--LLAENAEKV- 642
+ A +A G+ +L + +L + L+ NL+ KI + + + + + +V
Sbjct: 126 LHIASQIASGMVYLAS---QHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVG 182
Query: 643 GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVT 702
GH + + P + K + D++ FG+IL EI + L ++ +T
Sbjct: 183 GHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT---YGKQPWFQLSNTEVIECIT 239
Query: 703 ADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDV 749
R V P K + ++ + C + P +R +++++
Sbjct: 240 QGRVLERPRVCP-----------KEVYDIMLGCWQREPQQRLNIKEI 275
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Score = 53.0 bits (127), Expect = 2e-07
Identities = 66/279 (23%), Positives = 119/279 (42%), Gaps = 43/279 (15%)
Query: 485 MGEGSQGQMYRGRLK----NGTFVAIRCLKMKKCHSTR-NFMHHIELISKLRHRHLVSAL 539
+G G G++ GRLK VAI+ LK R +F+ ++ + H +++
Sbjct: 12 IGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLE 71
Query: 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFL 599
G + + ++ EY+ NG+L +++ + T Q + G+A G+++L
Sbjct: 72 GVVTKS-------KPVMIVTEYMENGSLDAFLRKHDGQ--FTVIQLVGMLRGIASGMKYL 122
Query: 600 HTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP-LLAENAEKV----GHVIPYSGSIDP 654
G +L +IL++ NLV K+S + L +L ++ E G IP + P
Sbjct: 123 SD---MGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTA-P 178
Query: 655 TNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR---SM 711
A K D++ +G+++ E++ S E + Q V+ A E R M
Sbjct: 179 EAIAYRKFTSASDVWSYGIVMWEVM------SYGERPYWEMSNQDVIKAIEEGYRLPAPM 232
Query: 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
PA +L +M + C K+ ERP E ++
Sbjct: 233 DCPA--------ALHQLM---LDCWQKDRNERPKFEQIV 260
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 53.2 bits (128), Expect = 2e-07
Identities = 37/154 (24%), Positives = 70/154 (45%), Gaps = 16/154 (10%)
Query: 485 MGEGSQGQMYRGR---LKNGTF--VAIRCLK-MKKCHSTRNFMHHIELISKLRHRHLVSA 538
+GEG G++ R L + T VA++ L + +F IE++ L H ++V
Sbjct: 12 LGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKY 71
Query: 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQF 598
G C + + LI EY+P+G+LR ++ +L + + + + KG+ +
Sbjct: 72 KGVC-----EKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINL--KRLLLFSSQICKGMDY 124
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632
L + +L +IL++ + KIS + L
Sbjct: 125 LGS---QRYIHRDLAARNILVESEDLVKISDFGL 155
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 51.9 bits (125), Expect = 3e-07
Identities = 44/150 (29%), Positives = 75/150 (50%), Gaps = 24/150 (16%)
Query: 486 GEGSQGQMYRG-RLKNGTFVAIRCLKM--KKCHSTRNFMHHIELISKLRHRHLVSALGHC 542
G G+ G +Y+G L+ G FVAI+ + + K + ++ M I+L+ L+H ++V +G
Sbjct: 9 GRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGS- 67
Query: 543 FECYFDDSSVSRIFLIFEYVPNGTLRSWISE-GHAHQSLTWTQRISAAIGVA---KGIQF 598
+ S I L EY NG+LR I + G +SL A+ V +G+ +
Sbjct: 68 ----IETSDSLYIIL--EYAENGSLRQIIKKFGPFPESL-------VAVYVYQVLQGLAY 114
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKIS 628
LH GV ++K +IL ++ V K++
Sbjct: 115 LHE---QGVIHRDIKAANILTTKDGVVKLA 141
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 51.5 bits (123), Expect = 5e-07
Identities = 59/274 (21%), Positives = 114/274 (41%), Gaps = 35/274 (12%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G G G ++ G VAI+ ++ + S +F+ +++ KL H LV G C E
Sbjct: 12 IGSGQFGLVWLGYWLEKRKVAIKTIR-EGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTE 70
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
S I L+FE++ +G L ++ + + + V +G+ +L +
Sbjct: 71 -------RSPICLVFEFMEHGCLSDYLRAQRG--KFSQETLLGMCLDVCEGMAYLESS-- 119
Query: 605 PGVFSNNLKITDILLDQNLVAKISSYNLP---LLAENAEKVGHVIPYSGSIDPTNSARGK 661
V +L + L+ +N V K+S + + L + G P S P + K
Sbjct: 120 -NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWS-SPEVFSFSK 177
Query: 662 LEEKIDIYDFGLILLEIIV-GR-PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKA 719
K D++ FG+++ E+ G+ P ++R + V +A + P +
Sbjct: 178 YSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE---------VVETINAGFRLYKPRL--- 225
Query: 720 CLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNL 753
+ +++ E+ C + P +RPS +L L
Sbjct: 226 ----ASQSVYELMQHCWKERPEDRPSFSLLLHQL 255
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Score = 51.9 bits (124), Expect = 5e-07
Identities = 72/298 (24%), Positives = 127/298 (42%), Gaps = 64/298 (21%)
Query: 485 MGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHST---RNFMHHIELISKL-RHRHLVSAL 539
+GEG+ GQ+ + R+ K+G + +MK+ S R+F +E++ KL H ++++ L
Sbjct: 15 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 74
Query: 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGH----------AHQS---LTWTQRI 586
G C ++L EY P+G L ++ + A+ + L+ Q +
Sbjct: 75 GAC-------EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 127
Query: 587 SAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE-NAEKVGHV 645
A VA+G+ +L +L +IL+ +N VAKI+ + L E +K
Sbjct: 128 HFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGR 184
Query: 646 IP--------YSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV--GRPLKSRKEVDLLKN 695
+P + S+ TNS D++ +G++L EI+ G P +L +
Sbjct: 185 LPVRWMAIESLNYSVYTTNS---------DVWSYGVLLWEIVSLGGTPYCGMTCAELYEK 235
Query: 696 QLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNL 753
Q ++ +N C DE M + C + P ERPS +L +L
Sbjct: 236 LPQGY----------RLEKPLN--CDDEVYDLMRQ----CWREKPYERPSFAQILVSL 277
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303 |
| >gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Score = 51.7 bits (124), Expect = 5e-07
Identities = 56/277 (20%), Positives = 114/277 (41%), Gaps = 44/277 (15%)
Query: 485 MGEGSQGQ--MYRGRLKNGTFVAIRCLKMKKCHST--RNFMHHIELISKLRHRHLVSALG 540
+G+G+ G+ +YR R ++ + V + + + + R+ ++ I ++S L+H ++++
Sbjct: 8 LGKGAFGEATLYR-RTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYN 66
Query: 541 HCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLH 600
H + DD++ + + EY GTL I Q + + + ++H
Sbjct: 67 H----FMDDNT---LLIEMEYANGGTLYDKIVRQKG-QLFEEEMVLWYLFQIVSAVSYIH 118
Query: 601 TGIVPGVFSNNLKITDILLDQNLVAKISSYNLP-------LLAENAEKVGHVIPYSGSID 653
G+ ++K +I L + + K+ + + +AE VG PY S
Sbjct: 119 KA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAETV--VG--TPYYMS-- 169
Query: 654 PTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVD 713
P K K DI+ G +L E++ LK + N L VV + +V
Sbjct: 170 PELCQGVKYNFKSDIWALGCVLYELLT---LKRTFDAT---NPLNLVVKIVQGNYTPVVS 223
Query: 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
++ + L ++P +RP+ ++VL
Sbjct: 224 VYS---------SELISLVHSLLQQDPEKRPTADEVL 251
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 52.9 bits (127), Expect = 6e-07
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 160 LILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEV 219
L LD L G +P+ + L L ++L N G +P S + +L VL LS N F G +
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 220 PDFSG-LTYLQVLDLENNALGPQFP 243
P+ G LT L++L+L N+L + P
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVP 507
|
Length = 623 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 51.3 bits (123), Expect = 6e-07
Identities = 43/198 (21%), Positives = 89/198 (44%), Gaps = 19/198 (9%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G G G ++ G+ + VAI+ ++ + S +F+ +++ KL H +LV G C
Sbjct: 12 LGSGQFGVVHLGKWRGKIDVAIKMIR-EGAMSEDDFIEEAKVMMKLSHPNLVQLYGVC-- 68
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRI-SAAIGVAKGIQFLHTGI 603
+ IF++ EY+ NG L +++ E + T+ + V + +++L +
Sbjct: 69 -----TKQRPIFIVTEYMANGCLLNYLRE---RKGKLGTEWLLDMCSDVCEAMEYLESN- 119
Query: 604 VPGVFSNNLKITDILLDQNLVAKISSYNLP---LLAENAEKVGHVIPYSGSIDPTNSARG 660
G +L + L+ ++ V K+S + L L + G P + P
Sbjct: 120 --GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWA-PPEVFDYS 176
Query: 661 KLEEKIDIYDFGLILLEI 678
+ K D++ FG+++ E+
Sbjct: 177 RFSSKSDVWSFGVLMWEV 194
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 51.1 bits (122), Expect = 7e-07
Identities = 62/275 (22%), Positives = 118/275 (42%), Gaps = 39/275 (14%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G+G G + G + G VA++C+K + + F+ ++++LRH +LV LG E
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWI-SEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI 603
+ ++++ EY+ G+L ++ S G + L + ++ V + +++L
Sbjct: 71 ---EKGG---LYIVTEYMAKGSLVDYLRSRGRS--VLGGDCLLKFSLDVCEAMEYLEAN- 121
Query: 604 VPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLE 663
+L ++L+ ++ VAK+S + L A + + G +P + P K
Sbjct: 122 --NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK-LPVKWT-APEALREKKFS 177
Query: 664 EKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKA---- 719
K D++ FG++L EI S V + L+ VV P V K
Sbjct: 178 TKSDVWSFGILLWEIY------SFGRVPYPRIPLKDVV------------PRVEKGYKMD 219
Query: 720 CLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754
D + +V +C + A RPS + L+
Sbjct: 220 APDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLE 254
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 51.2 bits (122), Expect = 7e-07
Identities = 65/273 (23%), Positives = 115/273 (42%), Gaps = 45/273 (16%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G G G+++ T VA++ +K S F+ ++ L+H LV
Sbjct: 14 LGAGQFGEVWMATYNKHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKL------ 66
Query: 545 CYFDDSSVSR--IFLIFEYVPNGTLRSWI-SEGHAHQSLTWTQRISAAIGVAKGIQFLHT 601
+ V++ I++I E++ G+L ++ S+ + Q L SA I A+G+ F+
Sbjct: 67 ----HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI--AEGMAFIEQ 120
Query: 602 GIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKV---GHVIPYSGSIDPTNSA 658
+L+ +IL+ +LV KI+ + L + E+ E G P + P
Sbjct: 121 ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTA-PEAIN 176
Query: 659 RGKLEEKIDIYDFGLILLEIIV-GR---PLKSRKEVDLLKNQLQAVVTADESARRSMVDP 714
G K D++ FG++L+EI+ GR P S EV + + R +
Sbjct: 177 FGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV---------IRALERGYRMPRPE- 226
Query: 715 AVNKACLDESLKTMMEVCVRCLLKNPAERPSVE 747
C +E + + +RC P ERP+ E
Sbjct: 227 ----NCPEE----LYNIMMRCWKNRPEERPTFE 251
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 51.1 bits (122), Expect = 9e-07
Identities = 69/291 (23%), Positives = 112/291 (38%), Gaps = 44/291 (15%)
Query: 485 MGEGSQGQ--MYRGRLKN---GTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVS 537
+GEG G+ +Y N G VA++ LK ++C +T + I ++ L H ++V
Sbjct: 12 LGEGHFGKVSLYCYDPANDGTGEMVAVKTLK-RECGQQNTSGWKKEINILKTLYHENIVK 70
Query: 538 ALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQ 597
G C + + LI EYVP G+LR ++ + L Q + A + +G+
Sbjct: 71 YKGCC-----SEQGGKGLQLIMEYVPLGSLRDYLPK----HKLNLAQLLLFAQQICEGMA 121
Query: 598 FLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNS 657
+LH+ +L ++LLD + + KI + L A GH Y D +
Sbjct: 122 YLHS---QHYIHRDLAARNVLLDNDRLVKIGDFGL----AKAVPEGHEY-YRVREDGDSP 173
Query: 658 A---------RGKLEEKIDIYDFGLILLEIIVG-----RPLKSRKEVDLLKNQLQAVVTA 703
K D++ FG+ L E++ P K +E+ K VV
Sbjct: 174 VFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRL 233
Query: 704 DESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754
E R M P C E M C RP+ ++ L+
Sbjct: 234 IELLERGMRLPCPKN-CPQEVYILMKN----CWETEAKFRPTFRSLIPILK 279
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 50.3 bits (120), Expect = 1e-06
Identities = 55/218 (25%), Positives = 105/218 (48%), Gaps = 33/218 (15%)
Query: 483 AFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHST-RNFMHHIELISKLRHRHLVSALGH 541
+GEG G + +G G VA+ K KC T + F+ +++KL H++LV LG
Sbjct: 12 EIIGEGEFGAVLQGEYT-GQKVAV---KNIKCDVTAQAFLEETAVMTKLHHKNLVRLLGV 67
Query: 542 CFECYFDDSSVSRIFLIFEYVPNGTLRSWI-SEGHAHQSLTWTQRISAAIGVAKGIQFLH 600
+ ++++ E + G L +++ + G A S+ Q + ++ VA+G+++L
Sbjct: 68 ILH--------NGLYIVMELMSKGNLVNFLRTRGRALVSVI--QLLQFSLDVAEGMEYLE 117
Query: 601 TGIVPGVFSNNLKITDILLDQNLVAKISSYNL----PLLAENAEKVGHVIPYSGSIDPTN 656
+ + +L +IL+ ++ VAK+S + L + +N++ +P + P
Sbjct: 118 S---KKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSK-----LPVKWTA-PEA 168
Query: 657 SARGKLEEKIDIYDFGLILLEII-VGR---PLKSRKEV 690
K K D++ +G++L E+ GR P S KEV
Sbjct: 169 LKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEV 206
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 50.0 bits (120), Expect = 2e-06
Identities = 64/279 (22%), Positives = 122/279 (43%), Gaps = 40/279 (14%)
Query: 486 GEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTRNFM-HHIELISKLRHRHLVSALGHCF 543
G G+ +Y L N VAI+ + ++KC ++ + + ++ +S+ H ++V +
Sbjct: 10 GVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKY--YT- 66
Query: 544 ECYFDDSSVSR--IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAI--GVAKGIQFL 599
S V ++L+ Y+ G+L + + L + I A + V KG+++L
Sbjct: 67 ------SFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGL--DEAIIATVLKEVLKGLEYL 118
Query: 600 HTGIVPGVFSNNLKITDILLDQNLVAKIS----SYNLPLLAENAEKVGHVI---PYSGSI 652
H+ G ++K +ILL ++ KI+ S +L + KV P +
Sbjct: 119 HSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAP 175
Query: 653 DPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTADESARRSM 711
+ G + K DI+ FG+ +E+ G P + +L LQ + S+
Sbjct: 176 EVMEQVHG-YDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQ-------NDPPSL 227
Query: 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
A K +S + M+ CL K+P++RP+ E++L
Sbjct: 228 ETGADYKKY-SKSFRKMIS---LCLQKDPSKRPTAEELL 262
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 50.1 bits (119), Expect = 2e-06
Identities = 67/292 (22%), Positives = 121/292 (41%), Gaps = 50/292 (17%)
Query: 484 FMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHST----RNFMHHIELISKL-RHRHLVSA 538
+GEG+ GQ+ + R+K +K K +++ R+F +E++ KL H ++++
Sbjct: 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 61
Query: 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQ-------------SLTWTQR 585
LG C ++L EY P+G L ++ + + +L+ Q
Sbjct: 62 LGAC-------EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 114
Query: 586 ISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEK--VG 643
+ A VA+G+ +L +L +IL+ +N VAKI+ + L E K +G
Sbjct: 115 LHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG 171
Query: 644 HVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV--GRPLKSRKEVDLLKNQLQAVV 701
+ +I+ N + D++ +G++L EI+ G P +L + Q
Sbjct: 172 RLPVRWMAIESLNYS--VYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY- 228
Query: 702 TADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNL 753
+ P C DE M + C + P ERPS +L +L
Sbjct: 229 --------RLEKP---LNCDDEVYDLMRQ----CWREKPYERPSFAQILVSL 265
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270 |
| >gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Score = 49.9 bits (119), Expect = 2e-06
Identities = 48/206 (23%), Positives = 90/206 (43%), Gaps = 23/206 (11%)
Query: 485 MGEGSQGQMYRGRLK----NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSAL 539
+G G G++ RGRLK FVAI+ LK R+F+ ++ + H +++
Sbjct: 12 IGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLE 71
Query: 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFL 599
G + + +I E++ NG L S++ + T Q + G+A G+++L
Sbjct: 72 GVV-------TKSRPVMIITEFMENGALDSFLRQNDGQ--FTVIQLVGMLRGIAAGMKYL 122
Query: 600 HTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP-LLAENAEKVGHVIPYSGSID----- 653
+L +IL++ NLV K+S + L L ++ + G I
Sbjct: 123 SE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTA 179
Query: 654 PTNSARGKLEEKIDIYDFGLILLEII 679
P A K D++ +G+++ E++
Sbjct: 180 PEAIAYRKFTSASDVWSYGIVMWEVM 205
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 48.2 bits (115), Expect = 5e-06
Identities = 48/208 (23%), Positives = 95/208 (45%), Gaps = 36/208 (17%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHST------RNFMHHIELISKLRHRHLVSA 538
+G+G+ G +Y+G LK T VA+ K C ST R F+ E++ + H ++V
Sbjct: 3 IGKGNFGDVYKGVLKGNTEVAV-----KTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKL 57
Query: 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQF 598
+G C + I+++ E VP G+L +++ + LT + + ++ A G+++
Sbjct: 58 IGVCVQKQ-------PIYIVMELVPGGSLLTFLRKKKN--RLTVKKLLQMSLDAAAGMEY 108
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSID----- 653
L + +L + L+ +N V KIS + + + E+ G + S +
Sbjct: 109 LES---KNCIHRDLAARNCLVGENNVLKISDFGM-----SREEEGGIYTVSDGLKQIPIK 160
Query: 654 ---PTNSARGKLEEKIDIYDFGLILLEI 678
P G+ + D++ +G++L E
Sbjct: 161 WTAPEALNYGRYTSESDVWSYGILLWET 188
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 48.1 bits (114), Expect = 6e-06
Identities = 60/276 (21%), Positives = 115/276 (41%), Gaps = 43/276 (15%)
Query: 484 FMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTR-NFMHHIELISKLRHRHLVSALGHC 542
+G+G+ G++++G LK+ T VA++ K + F+ ++ + H ++V +G C
Sbjct: 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVC 61
Query: 543 FECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTG 602
+ I+++ E VP G S++ + L Q + A+ A G+ +L +
Sbjct: 62 -------TQRQPIYIVMELVPGGDFLSFLRK--KKDELKTKQLVKFALDAAAGMAYLES- 111
Query: 603 IVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGS-------IDPT 655
+L + L+ +N V KIS + + + ++ + SG P
Sbjct: 112 --KNCIHRDLAARNCLVGENNVLKISDFGM-----SRQEDDGIYSSSGLKQIPIKWTAPE 164
Query: 656 NSARGKLEEKIDIYDFGLILLEII-VGR-PLKSRKEVDLLKNQLQAVVTADESARRSMVD 713
G+ + D++ +G++L E +G P + NQ QA ++ R M
Sbjct: 165 ALNYGRYSSESDVWSYGILLWETFSLGVCPYPG------MTNQ-QAREQVEKGYR--MSC 215
Query: 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDV 749
P + C D+ K M RC P RP ++
Sbjct: 216 P---QKCPDDVYKVMQ----RCWDYKPENRPKFSEL 244
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Score = 48.4 bits (115), Expect = 6e-06
Identities = 56/220 (25%), Positives = 93/220 (42%), Gaps = 24/220 (10%)
Query: 485 MGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCF 543
+G+GS G+++ LK F AI+ LK M + + R L A H F
Sbjct: 3 LGKGSFGKVFLAELKGTNQFFAIKALKKDVV-----LMDDDVECTMVEKRVLSLAWEHPF 57
Query: 544 ----ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFL 599
C F + +F + EY+ G L I H + A + G+QFL
Sbjct: 58 LTHLYCTF--QTKENLFFVMEYLNGGDLMFHIQSCH---KFDLPRATFYAAEIICGLQFL 112
Query: 600 HTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSID---PTN 656
H+ G+ +LK+ +ILLD + KI+ + + EN + G+ D P
Sbjct: 113 HS---KGIVYRDLKLDNILLDTDGHIKIADFGM--CKENMLGDAKTCTFCGTPDYIAPEI 167
Query: 657 SARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKN 695
K +D + FG++L E+++G+ P E +L ++
Sbjct: 168 LLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQS 207
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 48.8 bits (116), Expect = 7e-06
Identities = 51/175 (29%), Positives = 77/175 (44%), Gaps = 9/175 (5%)
Query: 90 LPLSFS-MDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIP 148
L LSF+ + L L +L L L + L +I LS+LE L++S+N + +
Sbjct: 168 LDLSFNDLSDLPKLLSNLSNLNNLDLSGNKI-SDLPPEIELLSALEELDLSNNSII-ELL 225
Query: 149 QELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVL 208
LS L +L L L N L +P+ +G+L L L L NN + S L NLR L
Sbjct: 226 SSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQ--ISSISSLGSLTNLREL 282
Query: 209 ALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAI 263
LS N +P + L +L L + KL +++L+ N +
Sbjct: 283 DLSGNSLSNALPL---IALLLLLLELLLNLLLTLKALELKLNSILLNNNILSNGE 334
|
Length = 394 |
| >gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Score = 47.7 bits (113), Expect = 1e-05
Identities = 57/273 (20%), Positives = 117/273 (42%), Gaps = 37/273 (13%)
Query: 478 NFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLK---MKKCHSTRNFMHHIELISKLRHR 533
+F+ +G+GS G++ K AI+ LK + + M +++
Sbjct: 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKP 60
Query: 534 HLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVA 593
++ L CF+ +V R++ + EYV G L I + + Q + A ++
Sbjct: 61 PFLTQLHSCFQ------TVDRLYFVMEYVNGGDLMYHIQQVGKFKE---PQAVFYAAEIS 111
Query: 594 KGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSID 653
G+ FLH G+ +LK+ +++LD KI+ + + E+ + G+ D
Sbjct: 112 VGLFFLHR---RGIIYRDLKLDNVMLDSEGHIKIADFGM--CKEHMVDGVTTRTFCGTPD 166
Query: 654 ---PTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRS 710
P A + +D + +G++L E++ G+P ++ D L Q+++ + S +S
Sbjct: 167 YIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDEL---FQSIMEHNVSYPKS 223
Query: 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAER 743
+ AV+ +C + K+P++R
Sbjct: 224 LSKEAVS-------------ICKGLMTKHPSKR 243
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 47.3 bits (112), Expect = 1e-05
Identities = 46/205 (22%), Positives = 87/205 (42%), Gaps = 23/205 (11%)
Query: 485 MGEGSQGQMYRGRLK----NGTFVAIRCLKMKKCHSTRN-FMHHIELISKLRHRHLVSAL 539
+G G G+++RG LK VAI+ LK R F+ ++ + H +++
Sbjct: 13 IGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLE 72
Query: 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFL 599
G + +I EY+ NG L ++ + + Q + G+A G+++L
Sbjct: 73 GVV-------TKFKPAMIITEYMENGALDKYLRDHDG--EFSSYQLVGMLRGIAAGMKYL 123
Query: 600 HTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEK-----VGHVIPYSGSIDP 654
+L +IL++ NL K+S + L + E+ + G IP + P
Sbjct: 124 SD---MNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTA-P 179
Query: 655 TNSARGKLEEKIDIYDFGLILLEII 679
A K D++ FG+++ E++
Sbjct: 180 EAIAYRKFTSASDVWSFGIVMWEVM 204
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 47.2 bits (113), Expect = 1e-05
Identities = 54/248 (21%), Positives = 97/248 (39%), Gaps = 69/248 (27%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCL------KMKKCHSTRNFMHHI----E 525
++F +GEGS + + K AI+ L K KK + ++ E
Sbjct: 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKK-------VKYVKIEKE 53
Query: 526 LISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSL--TWT 583
++++L + L + F+ D+ ++ + + EY PNG L +I + SL T
Sbjct: 54 VLTRLNGHPGIIKLYYTFQ---DEENL---YFVLEYAPNGELLQYI---RKYGSLDEKCT 104
Query: 584 QRISAAIGVAKGIQFLHT-GIVPGVFSNNLKITDILLDQNLVAKI---------SSYNLP 633
+ +A I +++LH+ GI+ +LK +ILLD+++ KI + P
Sbjct: 105 RFYAAEI--LLALEYLHSKGII----HRDLKPENILLDKDMHIKITDFGTAKVLDPNSSP 158
Query: 634 LLAENAEKVGHVIPYSGSIDPTNSARGK-------------LEEKI-----DIYDFGLIL 675
E S N R L EK D++ G I+
Sbjct: 159 ------ESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCII 212
Query: 676 LEIIVGRP 683
+++ G+P
Sbjct: 213 YQMLTGKP 220
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 46.7 bits (112), Expect = 2e-05
Identities = 51/297 (17%), Positives = 105/297 (35%), Gaps = 84/297 (28%)
Query: 486 GEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHS--TRNFMHHIELISKLRHRHLVSALGHC 542
G+GS G++Y R +G ++ + + + ++ ++++ KL H +++
Sbjct: 9 GKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNII----KY 64
Query: 543 FECYFDDSSVSRIFLIFEYVPNGTLRSWISE-GHAHQSLTWTQRISAAIGVAKGIQFLHT 601
+E + + ++ ++ EY G L I + + Q + + + +++LH
Sbjct: 65 YESFEEKG---KLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH- 120
Query: 602 GIVPGVFSNN-----LKITDILLDQNLVAKI----------SSYNL------------PL 634
S +K +I L N + K+ S+ +L P
Sbjct: 121 -------SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPE 173
Query: 635 LAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVG-RPLKSRKEVDLL 693
L +N PY+ K DI+ G +L E+ P + ++L
Sbjct: 174 LCQN-------KPYN--------------YKSDIWSLGCVLYELCTLKHPFEGENLLELA 212
Query: 694 KNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
L+ S L+ ++ L K+P ERPS+ +L
Sbjct: 213 LKILKGQYPPIPS-------------QYSSELRNLVS---SLLQKDPEERPSIAQIL 253
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 46.5 bits (110), Expect = 3e-05
Identities = 62/291 (21%), Positives = 115/291 (39%), Gaps = 53/291 (18%)
Query: 485 MGEGSQGQMYRGRL-----KNGTFVAIRCLK-MKKCHSTRNFMHHIELISKLRHRHLVSA 538
+GE + G++Y+G L + VAI+ LK + F L+++L H ++V
Sbjct: 13 LGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCL 72
Query: 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI--------------SEGHAHQSLTWTQ 584
LG + + ++FEY+ G L ++ +G SL
Sbjct: 73 LGVV-------TQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGD 125
Query: 585 RISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---- 640
+ AI +A G+++L + +L +IL+ + L KIS L +A+
Sbjct: 126 FLHIAIQIAAGMEYLSSHFF---VHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRV 182
Query: 641 KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVG--RPLKSRKEVDLLKNQLQ 698
+ ++P + P GK DI+ FG++L EI +P +++
Sbjct: 183 QPKSLLPIRW-MPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVI----- 236
Query: 699 AVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDV 749
E R+ + P C ++ M + C + P+ RP +D+
Sbjct: 237 ------EMVRKRQLLP-----CSEDCPPRMYSLMTECWQEGPSRRPRFKDI 276
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 46.7 bits (111), Expect = 4e-05
Identities = 26/86 (30%), Positives = 44/86 (51%)
Query: 254 LSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFD 313
L R IP ++S LQ ++LS N G P +L S+ S+ L+++ N G + +
Sbjct: 425 LDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPE 484
Query: 314 DLSCNPELGFVDLSSNLLTGQLPNCL 339
L L ++L+ N L+G++P L
Sbjct: 485 SLGQLTSLRILNLNGNSLSGRVPAAL 510
|
Length = 623 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 4e-05
Identities = 65/284 (22%), Positives = 126/284 (44%), Gaps = 49/284 (17%)
Query: 479 FDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVS 537
FD +GEGS G +Y+ + G VAI+ + +++ + + I ++ + ++V
Sbjct: 5 FDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE--DLQEIIKEISILKQCDSPYIVK 62
Query: 538 ALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAI--GVAKG 595
G YF ++ ++++ EY G++ + + T T+ AAI KG
Sbjct: 63 YYG----SYFKNTD---LWIVMEYCGAGSVSDIMKI----TNKTLTEEEIAAILYQTLKG 111
Query: 596 IQFLHTGIVPGVFSNN-----LKITDILLDQNLVAKISSYNLP--LLAENAEKVGHVI-- 646
+++LH SN +K +ILL++ AK++ + + L A++ VI
Sbjct: 112 LEYLH--------SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKR-NTVIGT 162
Query: 647 PYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADES 706
P+ + P K DI+ G+ +E+ G+P S D+ + ++A+
Sbjct: 163 PFWMA--PEVIQEIGYNNKADIWSLGITAIEMAEGKPPYS----DI--HPMRAIFMIPNK 214
Query: 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
++ DP ++ +K +CL+K+P ERPS +L
Sbjct: 215 PPPTLSDPEKWSPEFNDFVK-------KCLVKDPEERPSAIQLL 251
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 45.6 bits (108), Expect = 4e-05
Identities = 30/128 (23%), Positives = 57/128 (44%), Gaps = 19/128 (14%)
Query: 484 FMGEGSQGQMYRGRLKN----GT---FVAIRCLKMKKCHSTR-NFMHHIELISKLRHRHL 535
F+G G+ G++Y G + G+ VA++ L+ + F+ L+S H ++
Sbjct: 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNI 61
Query: 536 VSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQS----LTWTQRISAAIG 591
V LG C ++ ++I E + G L S++ + + LT + + +
Sbjct: 62 VKLLGVCLL---NEP----QYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLD 114
Query: 592 VAKGIQFL 599
VAKG +L
Sbjct: 115 VAKGCVYL 122
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 5e-05
Identities = 61/210 (29%), Positives = 93/210 (44%), Gaps = 10/210 (4%)
Query: 128 SRLSSLEILNMSSNFLNGA--IPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLS 185
S LS L L++ S + + L L L +L L+ N L + + L L L L
Sbjct: 64 SSLSRLLSLDLLSPSGISSLDGSENLLNLLPLPSLDLNLNRLRSNISELL-ELTNLTSLD 122
Query: 186 LRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKV 245
L NN P NL+ L LS+N L L+ LDL N L PK+
Sbjct: 123 LDNNNITDIPPLIGLLKSNLKELDLSDNKIESLPSPLRNLPNLKNLDLSFNDLS-DLPKL 181
Query: 246 G---KKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNI 302
L + LS NK +P E+ L+ LDLS+N + +L +L +++ L +
Sbjct: 182 LSNLSNLNNLDLSGNKISD-LPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLEL 239
Query: 303 ADNKLTGKLFDDLSCNPELGFVDLSSNLLT 332
++NKL L + + L +DLS+N ++
Sbjct: 240 SNNKLE-DLPESIGNLSNLETLDLSNNQIS 268
|
Length = 394 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 7e-05
Identities = 49/240 (20%), Positives = 97/240 (40%), Gaps = 52/240 (21%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRLKN-GTFVAIRCLKMKKCHST----RNFMHHIELISKLR 531
N ++ +GEG+ G + + R K G VAI+ K K+ + + ++++ +LR
Sbjct: 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIK--KFKESEDDEDVKKTALREVKVLRQLR 58
Query: 532 HRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEG------HAHQSLTWTQR 585
H ++V+ R++L+FEYV TL + A +S W
Sbjct: 59 HENIVNLKEAF-------RRKGRLYLVFEYVER-TLLELLEASPGGLPPDAVRSYIWQ-- 108
Query: 586 ISAAIGVAKGIQFLHT-GIVPGVFSNNLKITDILLDQNLVAKISSYNLP-LLAENAEKVG 643
+ + I + H+ I+ ++K +IL+ ++ V K+ + L
Sbjct: 109 ------LLQAIAYCHSHNII----HRDIKPENILVSESGVLKLCDFGFARALRARPAS-- 156
Query: 644 HVIPYSGS---------IDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL-KSRKEVDLL 693
+ Y + + TN + +D++ G I+ E++ G PL ++D L
Sbjct: 157 PLTDYVATRWYRAPELLVGDTNYGKP-----VDVWAIGCIMAELLDGEPLFPGDSDIDQL 211
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 40.6 bits (96), Expect = 8e-05
Identities = 22/60 (36%), Positives = 29/60 (48%)
Query: 156 SLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHF 215
+L++L L N L LP L VL L N P++FS L +LR L LS N+
Sbjct: 1 NLKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 8e-05
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 10/101 (9%)
Query: 471 ELEEATNNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTRNFMHHIELISK 529
E E + +G+G+ G +Y R L +AI+ + + + I L S
Sbjct: 2 EYEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSY 61
Query: 530 LRHRHLVSALGHCFECYFDDSSVSRIFLIF-EYVPNGTLRS 569
L+HR++V LG S + F IF E VP G+L +
Sbjct: 62 LKHRNIVQYLGSD--------SENGFFKIFMEQVPGGSLSA 94
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268 |
| >gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Score = 44.5 bits (105), Expect = 9e-05
Identities = 63/286 (22%), Positives = 121/286 (42%), Gaps = 53/286 (18%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCH------STRNFMHHIELISKLRHRHLVSA 538
+G+G+ G +Y G G +A++ +++ + ++L+ L+H ++V
Sbjct: 8 LGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQY 67
Query: 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLT---WTQRISAAIGVAKG 595
LG C DD+++S IF+ E+VP G++ S ++ +T++I G
Sbjct: 68 LGTC----LDDNTIS-IFM--EFVPGGSISSILNRFGPLPEPVFCKYTKQI------LDG 114
Query: 596 IQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY---------NLPLLAENAEKVGHVI 646
+ +LH V ++K +++L N + K+ + L N K H
Sbjct: 115 VAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGT 171
Query: 647 PYSGSIDPTN-SARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADE 705
PY + + N S G+ K DI+ G + E+ G+P + + +L A+
Sbjct: 172 PYWMAPEVINESGYGR---KSDIWSIGCTVFEMATGKPPLASMD------RLAAMFYI-- 220
Query: 706 SARRSMVDPAVNKACLDESLK-TMMEVCVRCLLKNPAERPSVEDVL 750
A R ++ L +S ++ CL ++ ERPS +L
Sbjct: 221 GAHRGLMPR------LPDSFSAAAIDFVTSCLTRDQHERPSALQLL 260
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 44.5 bits (105), Expect = 1e-04
Identities = 45/201 (22%), Positives = 87/201 (43%), Gaps = 23/201 (11%)
Query: 485 MGEGSQGQMYRGRLKN-GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHC- 542
+G G G++Y G K VA++ LK + F+ ++ +++H +LV LG C
Sbjct: 14 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 72
Query: 543 FECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTG 602
E F ++I E++ G L ++ E + Q + + A ++ +++L
Sbjct: 73 REPPF--------YIITEFMTYGNLLDYLRECN-RQEVNAVVLLYMATQISSAMEYLEKK 123
Query: 603 IVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHV-----IPYSGSIDPTNS 657
+L + L+ +N + K++ + L L H I ++ P +
Sbjct: 124 ---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA---PESL 177
Query: 658 ARGKLEEKIDIYDFGLILLEI 678
A K K D++ FG++L EI
Sbjct: 178 AYNKFSIKSDVWAFGVLLWEI 198
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Score = 44.6 bits (105), Expect = 1e-04
Identities = 54/268 (20%), Positives = 115/268 (42%), Gaps = 29/268 (10%)
Query: 485 MGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCF 543
+GEGS G + R K +G VA++ + ++K + + ++ +H+++V
Sbjct: 29 IGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVV------- 81
Query: 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI 603
E Y ++++ E++ G L +S+ L Q + V + + +LH+
Sbjct: 82 EMYKSYLVGEELWVLMEFLQGGALTDIVSQ----TRLNEEQIATVCESVLQALCYLHS-- 135
Query: 604 VPGVFSNNLKITDILLDQNLVAKISSYNL-PLLAENAEKVGHVIPYSGSIDPTNSARGKL 662
GV ++K ILL + K+S + ++++ K ++ + P +R
Sbjct: 136 -QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPY 194
Query: 663 EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLD 722
++DI+ G++++E++ G P + V A + R S N +
Sbjct: 195 GTEVDIWSLGIMVIEMVDGEPPYFS----------DSPVQAMKRLRDSPPPKLKNAHKIS 244
Query: 723 ESLKTMMEVCVRCLLKNPAERPSVEDVL 750
L+ +E R L + P ER + +++L
Sbjct: 245 PVLRDFLE---RMLTREPQERATAQELL 269
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297 |
| >gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 44.5 bits (106), Expect = 1e-04
Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 31/157 (19%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMH---HIELISKLRH 532
++F+ +G GS G++ R K +G + A++ L K + H ++ +RH
Sbjct: 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRH 60
Query: 533 RHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI------SEGHAHQSLTWTQRI 586
LV+ G + DDS+ ++L+ EYVP G L S + E A R
Sbjct: 61 PFLVNLYGS----FQDDSN---LYLVMEYVPGGELFSHLRKSGRFPEPVA--------RF 105
Query: 587 SAAIGVAKGIQFLHT-GIVPGVFSNNLKITDILLDQN 622
AA V +++LH+ IV +LK ++LLD +
Sbjct: 106 YAA-QVVLALEYLHSLDIV----YRDLKPENLLLDSD 137
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290 |
| >gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 1e-04
Identities = 36/159 (22%), Positives = 74/159 (46%), Gaps = 25/159 (15%)
Query: 484 FMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRN-FMHHIELISKLRHRHLVSALGHC 542
F+GEG+ + L VA++ L+ + RN F+ I+++S+L++ +++ LG C
Sbjct: 32 FLGEGAPEFDGQPVL-----VAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVC 86
Query: 543 FECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISA---------AIGVA 593
DD + +I EY+ NG L ++S+ + T I + A+ +A
Sbjct: 87 VS---DDP----LCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIA 139
Query: 594 KGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632
G+++L + +L + L+ + KI+ + +
Sbjct: 140 SGMKYLAS---LNFVHRDLATRNCLVGNHYTIKIADFGM 175
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295 |
| >gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 2e-04
Identities = 58/278 (20%), Positives = 121/278 (43%), Gaps = 49/278 (17%)
Query: 485 MGEGSQGQMYRGRLKN-GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCF 543
+GEGS G + +K+ G VA++ + ++K + + ++ +H ++V
Sbjct: 28 IGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVV------- 80
Query: 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI 603
E Y ++++ E++ G L ++ H + Q + + V K + LH
Sbjct: 81 EMYNSYLVGDELWVVMEFLEGGALTDIVT----HTRMNEEQIAAVCLAVLKALSVLHA-- 134
Query: 604 VPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGS---IDPTNSARG 660
GV ++K ILL + K+S + A+ +++V G+ + P +R
Sbjct: 135 -QGVIHRDIKSDSILLTHDGRVKLSDFGF--CAQVSKEVPRRKSLVGTPYWMAPELISRL 191
Query: 661 KLEEKIDIYDFGLILLEIIVGR-------PLKSRKEV-DLLKNQLQAVVTADESARRSMV 712
++DI+ G++++E++ G PLK+ K + D L +L+
Sbjct: 192 PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLK-------------- 237
Query: 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
N + SLK ++ R L+++PA+R + ++L
Sbjct: 238 ----NLHKVSPSLKGFLD---RLLVRDPAQRATAAELL 268
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292 |
| >gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 2e-04
Identities = 69/290 (23%), Positives = 126/290 (43%), Gaps = 41/290 (14%)
Query: 485 MGEGSQGQMYRGRLKN-GTFVAIRCLKMKK----CHSTRNFMHHIELISKLRHRHLVSAL 539
+GEG+ G +Y+GR K G VA++ ++++ ST + I L+ +L+H ++V
Sbjct: 8 IGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTA--IREISLLKELQHPNIVCLQ 65
Query: 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFL 599
+ SR++LIFE++ + L+ ++ Q + S + +GI F
Sbjct: 66 DVLMQ-------ESRLYLIFEFL-SMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFC 117
Query: 600 HTGIVPGVFSNNLKITDILLDQNLVAKISSYNL------PLLAENAEKVGHVIPYSGSID 653
H+ V +LK ++L+D V K++ + L P+ E V + Y
Sbjct: 118 HS---RRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTHEVV--TLWYRAPEV 172
Query: 654 PTNSARGKLEEKIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQAVVTADES---ARR 709
S R +DI+ G I E+ +PL E+D L + + T E
Sbjct: 173 LLGSPR--YSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVT 230
Query: 710 SMVD-----PAVNKACLDESLKTM----MEVCVRCLLKNPAERPSVEDVL 750
S+ D P K L ++K + +++ + L+ +PA+R S + L
Sbjct: 231 SLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKAL 280
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285 |
| >gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 2e-04
Identities = 59/275 (21%), Positives = 122/275 (44%), Gaps = 36/275 (13%)
Query: 485 MGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCF 543
+G+G+ G++Y+ + K G A + ++ K ++M IE+++ H ++V LG
Sbjct: 20 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLG--- 76
Query: 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI 603
Y+D +++++ E+ P G + + + E + LT Q + + +Q+LH+
Sbjct: 77 AFYWD----GKLWIMIEFCPGGAVDAIMLE--LDRGLTEPQIQVICRQMLEALQYLHS-- 128
Query: 604 VPGVFSNNLKITDILLDQNLVAK-----ISSYNLPLLAENAEKVGHVIPYSGSIDPTNSA 658
+ +LK ++LL + K +S+ N+ L +G PY + +
Sbjct: 129 -MKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSFIG--TPYWMAPEVVMCE 185
Query: 659 RGK---LEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPA 715
K + K DI+ G+ L+E+ P E+ N ++ ++ +S ++ P+
Sbjct: 186 TMKDTPYDYKADIWSLGITLIEMAQIEP--PHHEL----NPMRVLLKIAKSEPPTLSQPS 239
Query: 716 VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
+ LKT ++ K+P RPS +L
Sbjct: 240 KWSMEFRDFLKTALD-------KHPETRPSAAQLL 267
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292 |
| >gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 2e-04
Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 21/207 (10%)
Query: 483 AFMGEGSQGQMYRGRLKNGT-FVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVS-ALG 540
+G+GS G++ LK F AI+ LK + ++ + R +++ A
Sbjct: 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDV------VLEDDDVECTMVERRVLALAWE 54
Query: 541 HCFEC--YFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQF 598
H F + + +F + EY+ G L I + +A I G+QF
Sbjct: 55 HPFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQSSGRF-DEARARFYAAEIIC--GLQF 111
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSID---PT 655
LH G+ +LK+ ++LLD++ KI+ + + N E + G+ D P
Sbjct: 112 LHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKAST--FCGTPDYIAPE 166
Query: 656 NSARGKLEEKIDIYDFGLILLEIIVGR 682
K E +D + FG++L E+++G+
Sbjct: 167 ILKGQKYNESVDWWSFGVLLYEMLIGQ 193
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316 |
| >gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 2e-04
Identities = 52/219 (23%), Positives = 94/219 (42%), Gaps = 45/219 (20%)
Query: 534 HLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWIS------EGHAHQSLTWTQRIS 587
++ L CF+ ++ R++ + EYV G L I E HA +
Sbjct: 61 PFLTQLHSCFQ------TMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHA---------VF 105
Query: 588 AAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIP 647
A +A G+ FLH+ G+ +LK+ +++LD KI+ + + EN
Sbjct: 106 YAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDAEGHIKIADFGM--CKENIFGGKTTRT 160
Query: 648 YSGS---IDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704
+ G+ I P A + +D + FG++L E++ G+P ++ D L Q+++ +
Sbjct: 161 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDEL---FQSIMEHN 217
Query: 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAER 743
S +S+ AV +C L K+PA+R
Sbjct: 218 VSYPKSLSKEAV-------------SICKGLLTKHPAKR 243
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 39.1 bits (92), Expect = 3e-04
Identities = 22/60 (36%), Positives = 31/60 (51%)
Query: 272 QLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLL 331
L+ LDLS+NR A LP++ L+++ N LT + S P L +DLS N L
Sbjct: 1 NLKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 3e-04
Identities = 71/290 (24%), Positives = 119/290 (41%), Gaps = 47/290 (16%)
Query: 483 AFMGEGSQGQMYRGRLKNGT--FVAIRCL-KMKKCHSTRNFMHHIELISKLRHRHLVSAL 539
AF GE +G YRGR + VA++ L + +F+ ++SK H+++V +
Sbjct: 18 AF-GEVYEGL-YRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLI 75
Query: 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQ----SLTWTQRISAAIGVAKG 595
G FE + R F++ E + G L+S++ E SLT + A VAKG
Sbjct: 76 GVSFE------RLPR-FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKG 128
Query: 596 IQFLHTGIVPGVFSNNLKITDILLDQ---NLVAKISSYNLP---LLAENAEKVGHVIPYS 649
++L ++ + LL VAKI+ + + A K G +
Sbjct: 129 CKYLEEN---HFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPI 185
Query: 650 GSIDPTNSARGKLEEKIDIYDFGLILLEII-VGR---PLKSRKEVDLLKNQLQAVVTADE 705
+ P G K D++ FG++L EI +G P ++ +EV ++ V
Sbjct: 186 KWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEV------MEFVT---G 236
Query: 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755
R +DP K C + M C P +RP+ +L +Q+
Sbjct: 237 GGR---LDPP--KGCPGPVYRIM----TDCWQHTPEDRPNFATILERIQY 277
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 43.2 bits (101), Expect = 3e-04
Identities = 57/273 (20%), Positives = 119/273 (43%), Gaps = 39/273 (14%)
Query: 485 MGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCF 543
+G+G+ G +Y + G VAIR + +++ ++ I ++ + ++ ++V+
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN------ 81
Query: 544 ECYFDDSSV-SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTG 602
Y D V ++++ EY+ G+L ++E + Q + + ++FLH+
Sbjct: 82 --YLDSYLVGDELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSN 135
Query: 603 IVPGVFSNNLKITDILLDQNLVAKISSYNL-----PLLAENAEKVGHVIPYSGSIDPTNS 657
V ++K +ILL + K++ + P ++ + VG PY + P
Sbjct: 136 ---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVG--TPYW--MAPEVV 188
Query: 658 ARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVN 717
R K+DI+ G++ +E+I G P L +N L+A+ + + +P
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPPY------LNENPLRALYLIATNGTPELQNPEKL 242
Query: 718 KACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
A + L RCL + +R S +++L
Sbjct: 243 SAIFRDFLN-------RCLDMDVEKRGSAKELL 268
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 42.9 bits (102), Expect = 3e-04
Identities = 58/267 (21%), Positives = 114/267 (42%), Gaps = 42/267 (15%)
Query: 486 GEGSQGQMYRGRLKN-GTFVAIRCLKMKKCHSTRNFMH-HIE--LISKLRHRHLVSALGH 541
G+GS G++ R K+ G A++ LK KK + H E ++S++ H +V
Sbjct: 2 GKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIV----- 56
Query: 542 CFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHT 601
F +++L+ EY P G L S +S+ S + +A I +A +++LH+
Sbjct: 57 KLHYAFQTEE--KLYLVLEYAPGGELFSHLSK-EGRFSEERARFYAAEIVLA--LEYLHS 111
Query: 602 -GIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSID---PTNS 657
GI+ +LK +ILLD + K++ + L E + + + G+ + P
Sbjct: 112 LGIIYR----DLKPENILLDADGHIKLTDFGLA--KELSSEGSRTNTFCGTPEYLAPEVL 165
Query: 658 ARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAV 716
+ +D + G++L E++ G+ P + ++ + L+ + E
Sbjct: 166 LGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFPE----------- 214
Query: 717 NKACLDESLKTMMEVCVRCLLKNPAER 743
L + ++ L K+P +R
Sbjct: 215 ---FLSPEARDLIS---GLLQKDPTKR 235
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 42.5 bits (100), Expect = 4e-04
Identities = 55/289 (19%), Positives = 113/289 (39%), Gaps = 50/289 (17%)
Query: 478 NFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIE---LISKLRHR 533
+F+ +G+GS G +++ K + A++ + + K + R I+ +++KL
Sbjct: 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKM-NRREREEAIDEARVLAKLDSS 59
Query: 534 HLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAH---QSLTWTQRISAAI 590
+++ +E + D ++ ++ EY NG L + + W I +
Sbjct: 60 YIIRY----YESFLDKG---KLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILL 112
Query: 591 GVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVI---P 647
G+A LH+ + ++K ++ LD KI + L + + I P
Sbjct: 113 GLA----HLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTP 165
Query: 648 YSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAV---VTA 703
Y S P EK D++ G++L E G+ P + + L+ ++ V V+
Sbjct: 166 YYLS--PELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPVSQ 223
Query: 704 DESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWN 752
S + + ++ +CL K+ +RP +L N
Sbjct: 224 MYSQQ-------------------LAQLIDQCLTKDYRQRPDTFQLLRN 253
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Score = 43.1 bits (101), Expect = 4e-04
Identities = 50/219 (22%), Positives = 93/219 (42%), Gaps = 47/219 (21%)
Query: 535 LVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWIS------EGHAHQSLTWTQRISA 588
++ L CF+ ++ R++ + EYV G L I E HA +
Sbjct: 62 FLTQLHSCFQ------TMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHA---------VFY 106
Query: 589 AIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPY 648
A +A G+ FLH+ G+ +LK+ +++LD KI+ + + EN +
Sbjct: 107 AAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGM--CKENMWDGVTTKTF 161
Query: 649 SGSID---PTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTAD 704
G+ D P A + +D + FG++L E++ G+ P + E +L Q+++ +
Sbjct: 162 CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL----FQSIMEHN 217
Query: 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAER 743
+ +SM AV +C + K+P +R
Sbjct: 218 VAYPKSMSKEAV-------------AICKGLMTKHPGKR 243
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323 |
| >gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Score = 42.6 bits (100), Expect = 5e-04
Identities = 59/284 (20%), Positives = 105/284 (36%), Gaps = 42/284 (14%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRN----FMHHIELISKLRHRHLVSALG 540
+G G G++ G G A +K + +T + F+ ++ +L H +++ LG
Sbjct: 3 IGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLG 62
Query: 541 HCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRI--SAAIGVAKGIQF 598
C E L+ E+ P G L++++ + + + A VA G+ +
Sbjct: 63 QCIE-------SIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLW 115
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL------LAENAEKVGHVIPYSGSI 652
LH ++L + + L +L KI Y L L + H +P
Sbjct: 116 LHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDC--HAVPLRWLA 170
Query: 653 DPTNSARG------KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADES 706
RG +K +I+ G+ + E+ + DL Q+ V ++
Sbjct: 171 PELVEIRGQDLLPKDQTKKSNIWSLGVTMWELF---TAADQPYPDLSDEQVLKQVVREQ- 226
Query: 707 ARRSMVDPAVNKACLDESL-KTMMEVCVRCLLKNPAERPSVEDV 749
D + K LD EV C L +P RP+ E+V
Sbjct: 227 ------DIKLPKPQLDLKYSDRWYEVMQFCWL-DPETRPTAEEV 263
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 5e-04
Identities = 63/305 (20%), Positives = 115/305 (37%), Gaps = 70/305 (22%)
Query: 484 FMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHST----RNFMHHIELISKLRHRHLVSA 538
+GEG+ G +Y+ R G VAI+ K+K + + + I+L+ +L H +++
Sbjct: 6 KIGEGTYGVVYKARDKLTGEIVAIK--KIKLRFESEGIPKTALREIKLLKELNHPNIIKL 63
Query: 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQF 598
L + + + L+FE++ + L I + L + S + +G+ F
Sbjct: 64 L----DVFRHKGDLY---LVFEFM-DTDLYKLIK--DRQRGLPESLIKSYLYQLLQGLAF 113
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSA 658
H+ G+ +LK ++L++ V K++ + L V PY+ +
Sbjct: 114 CHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFG-----SPVRPYTHYV----VT 161
Query: 659 R-----------GKLEEKIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQAVVTADES 706
R +DI+ G I E++ RPL + E+D L + + T D
Sbjct: 162 RWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPE 221
Query: 707 --------ARRSMVD-------------PAVNKACLDESLKTMMEVCVRCLLKNPAERPS 745
AR P + LD L + M L +P +R +
Sbjct: 222 VWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALD--LLSQM------LHYDPHKRIT 273
Query: 746 VEDVL 750
E L
Sbjct: 274 AEQAL 278
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 6e-04
Identities = 66/314 (21%), Positives = 127/314 (40%), Gaps = 86/314 (27%)
Query: 485 MGEGSQGQMYRGRL------KNGTFVAIRCLKMKKC-HSTRNFMHHIELISKL-RHRHLV 536
+GEG+ GQ+ + + VA++ LK + + +E++ + +H++++
Sbjct: 20 LGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNII 79
Query: 537 SALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI------------SEGHAH-QSLTWT 583
+ LG C + ++++ EY +G LR ++ + ++LT
Sbjct: 80 NLLGVC-------TQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQK 132
Query: 584 QRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVG 643
+S A VA+G++FL + +L ++L+ ++ V KI+ + L A +
Sbjct: 133 DLVSFAYQVARGMEFLAS---KKCIHRDLAARNVLVTEDHVMKIADFGL------ARDIH 183
Query: 644 HVIPYSGSIDPTNSARGKLEEK---------------IDIYDFGLILLEIIV--GRP--- 683
H+ Y + G+L K D++ FG++L EI G P
Sbjct: 184 HIDYYR------KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPG 237
Query: 684 LKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAER 743
+ + LLK E R ++ N C E L +M C + P++R
Sbjct: 238 IPVEELFKLLK----------EGYR---MEKPQN--CTQE-LYHLMRDCWH---EVPSQR 278
Query: 744 PS----VEDVLWNL 753
P+ VED+ L
Sbjct: 279 PTFKQLVEDLDRML 292
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293 |
| >gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 6e-04
Identities = 68/331 (20%), Positives = 122/331 (36%), Gaps = 107/331 (32%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRLKN-GTFVAIRCL------KMKKCHSTRNFMHHIELISK 529
++ +GEGS G + + + K G VAI+ KM K + M I ++ +
Sbjct: 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVK----KIAMREIRMLKQ 56
Query: 530 LRHRHLVSALGHCFECYFDDSSVSRIFLIFEYV-----------PNG----TLRSWISEG 574
LRH +LV+ + R++L+FE+V PNG +R ++ +
Sbjct: 57 LRHENLVNLIEVF-------RRKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQ- 108
Query: 575 HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP- 633
+ +GI+F H+ + ++K +IL+ Q+ V K+ +
Sbjct: 109 -----------------ILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFAR 148
Query: 634 -LLAENAEKVGHVIPYSGSIDPTNSARG--------KLEEKIDIYDFGLILLEIIVGRPL 684
L A +V T R K +DI+ G ++ E++ G PL
Sbjct: 149 TLAAPGEVYTDYV--------ATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPL 200
Query: 685 -KSRKEVDLL-------------------KNQL-QAVVTAD----ESARRSMVDPAVNKA 719
++D L KN L + + E + P ++
Sbjct: 201 FPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRF--PKLSGL 258
Query: 720 CLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
LD + + C+R +P +RPS +L
Sbjct: 259 VLD-----LAKQCLRI---DPDDRPSSSQLL 281
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 7e-04
Identities = 56/228 (24%), Positives = 96/228 (42%), Gaps = 45/228 (19%)
Query: 485 MGEGSQGQMYRG---RLKNG---TFVAIRCLKMKKCHST-RNFMHHIELISKLRHRHLVS 537
+GEG G++ + RLK T VA++ LK S R+ + L+ ++ H H++
Sbjct: 8 LGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIK 67
Query: 538 ALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHA--------------------- 576
G C S + LI EY G+LRS++ E
Sbjct: 68 LYGAC-------SQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPD 120
Query: 577 HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636
++LT IS A +++G+Q+L + +L ++L+ + KIS + L
Sbjct: 121 ERALTMGDLISFAWQISRGMQYLAE---MKLVHRDLAARNVLVAEGRKMKISDFGLS--R 175
Query: 637 ENAEKVGHVIPYSGSIDPTNSARGKLEEKI-----DIYDFGLILLEII 679
+ E+ +V G I A L + I D++ FG++L EI+
Sbjct: 176 DVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 223
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 8e-04
Identities = 65/289 (22%), Positives = 125/289 (43%), Gaps = 53/289 (18%)
Query: 483 AFMGEGSQGQMYRG-RLKNGTFVAIRCLKM-----KKCHSTRNFM----HHIELISKLRH 532
A +G GS G +Y G +G +A++ +++ R+ + I L+ +L+H
Sbjct: 6 ALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQH 65
Query: 533 RHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISE-GHAHQSL--TWTQRISAA 589
++V LG D+ IFL EYVP G++ + ++ G ++L + ++I
Sbjct: 66 ENIVQYLGSSL-----DADHLNIFL--EYVPGGSVAALLNNYGAFEETLVRNFVRQI--- 115
Query: 590 IGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE----NAEKVGHV 645
KG+ +LH G+ ++K +IL+D KIS + + E + + G
Sbjct: 116 ---LKGLNYLHN---RGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGAR 169
Query: 646 IPYSGSI---DPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVV 701
GS+ P + K DI+ G +++E++ G+ P QLQA+
Sbjct: 170 PSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPD-------CTQLQAIF 222
Query: 702 TADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
E+A + ++A + L+ E+ + +RP+ ++L
Sbjct: 223 KIGENASPEIPSNISSEA--IDFLEKTFEI-------DHNKRPTAAELL 262
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 8e-04
Identities = 30/121 (24%), Positives = 58/121 (47%), Gaps = 13/121 (10%)
Query: 485 MGEGSQGQMYRGRL-----KNGTFVAIRCLKMKKCHS-TRNFMHHIELISKLRHRHLVSA 538
+GEG G++ R G VA++ LK + + + IE++ L H ++V
Sbjct: 12 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 71
Query: 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQF 598
G C + + I LI E++P+G+L+ ++ +L Q++ A+ + KG+ +
Sbjct: 72 KGIC-----TEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINL--KQQLKYAVQICKGMDY 124
Query: 599 L 599
L
Sbjct: 125 L 125
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 9e-04
Identities = 33/158 (20%), Positives = 68/158 (43%), Gaps = 46/158 (29%)
Query: 486 GEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTR--NFMHHIELISKLR-HRHLVSALGH 541
GEG+ ++ + + K G + AI+C+K K S N + I+ + +L H +++ +
Sbjct: 8 GEGTFSEVLKAQSRKTGKYYAIKCMK-KHFKSLEQVNNLREIQALRRLSPHPNILRLI-- 64
Query: 542 CFECYFDDSSVSRIFLIFE---------------YVPNGTLRSWISEGHAHQSLTWTQRI 586
E FD + R+ L+FE +P ++S++ +Q L
Sbjct: 65 --EVLFDRKT-GRLALVFELMDMNLYELIKGRKRPLPEKRVKSYM-----YQLL------ 110
Query: 587 SAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV 624
K + +H G+F ++K +IL+ +++
Sbjct: 111 -------KSLDHMHRN---GIFHRDIKPENILIKDDIL 138
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282 |
| >gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 0.001
Identities = 63/279 (22%), Positives = 119/279 (42%), Gaps = 47/279 (16%)
Query: 485 MGEGSQGQMYRGR-LKNGTFVAIRCLKM-KKCHSTRNFMHHIELISKLRHRHLVSALGHC 542
+G G+ G +YRG+ + G VA++ + + + + L+S+LR +
Sbjct: 9 IGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQ-PPNITKY 67
Query: 543 FECYFDDSSVSRIFLIFEYVPNGTLRSW-----ISEGHAHQSLTWTQRISAAIGVAKGIQ 597
+ Y R+++I EY G++R+ I+E + S+ + + A ++
Sbjct: 68 YGSYLKGP---RLWIIMEYAEGGSVRTLMKAGPIAEKYI--SVIIREVLVA-------LK 115
Query: 598 FLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP-LLAENAEK----VGHVIPYSGSI 652
++H GV ++K +IL+ K+ + + LL +N+ K VG PY +
Sbjct: 116 YIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFVG--TPYW--M 168
Query: 653 DPTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSM 711
P GK + K DI+ G+ + E+ G P S + +A++ +S
Sbjct: 169 APEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVD------AFRAMMLIPKSK---- 218
Query: 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
P + + K + E CL + P ER S E++L
Sbjct: 219 -PPRLE---DNGYSKLLREFVAACLDEEPKERLSAEELL 253
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 0.001
Identities = 55/282 (19%), Positives = 108/282 (38%), Gaps = 40/282 (14%)
Query: 485 MGEGSQGQMYRGRLKNG------TFVAIRCL-KMKKCHSTRNFMHHIELISKLRHRHLVS 537
+G G G+++ + K T V ++ L K K + F +++ KL H+++V
Sbjct: 13 LGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVR 72
Query: 538 ALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI------SEGHAHQSLTWTQRISAAIG 591
LG C E ++I EY G L+ ++ E L+ Q+++
Sbjct: 73 LLGLCRE-------AEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQ 125
Query: 592 VAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPY 648
+A G+ L +L + L+ K+S +L N+E +IP
Sbjct: 126 IALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPL 182
Query: 649 SGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESAR 708
+ P K D++ FG+++ E+ L D + V+ ++ +
Sbjct: 183 RW-LAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD------EEVLNRLQAGK 235
Query: 709 RSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
+ P + + ++ RC NP +RPS +++
Sbjct: 236 LELPVP-------EGCPSRLYKLMTRCWAVNPKDRPSFSELV 270
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Score = 41.2 bits (96), Expect = 0.001
Identities = 54/270 (20%), Positives = 119/270 (44%), Gaps = 34/270 (12%)
Query: 485 MGEGSQGQMYRGRLKNGT--FVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGH 541
+G+GS G++++G + N T VAI+ + +++ + I ++S+ ++ G
Sbjct: 12 IGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG- 69
Query: 542 CFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHT 601
Y D+ ++++I EY+ G+ + G L TQ + + KG+ +LH+
Sbjct: 70 ---SYLKDT---KLWIIMEYLGGGSALDLLEPG----PLDETQIATILREILKGLDYLHS 119
Query: 602 GIVPGVFSNNLKITDILLDQNLVAKISSYNLP-LLAENAEKVGHVIPYSGSIDPTNSARG 660
++K ++LL ++ K++ + + L + K + + P +
Sbjct: 120 ---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQS 176
Query: 661 KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKAC 720
+ K DI+ G+ +E+ G P S +L ++ ++ + +P +
Sbjct: 177 AYDSKADIWSLGITAIELAKGEPPHS----ELHPMKVLFLIPKN--------NPPTLEGN 224
Query: 721 LDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
+ LK +E C L K P+ RP+ +++L
Sbjct: 225 YSKPLKEFVEAC---LNKEPSFRPTAKELL 251
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277 |
| >gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 0.001
Identities = 65/286 (22%), Positives = 108/286 (37%), Gaps = 34/286 (11%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHI----ELISKLRH 532
+ +GEG+ G + + RLKN I LK + I E+ +
Sbjct: 1 EKIVELSRLGEGAGGSVTKCRLKNTG--MIFALKTITTDPNPDLQKQILRELEINKSCKS 58
Query: 533 RHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISA---- 588
++V G + D+SS S I + EY G+L S + RI
Sbjct: 59 PYIVKYYG----AFLDESS-SSIGIAMEYCEGGSLDSIYKK-----VKKRGGRIGEKVLG 108
Query: 589 --AIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKV-GHV 645
A V KG+ +LH+ + ++K ++ILL + K+ + + E + G
Sbjct: 109 KIAESVLKGLSYLHS---RKIIHRDIKPSNILLTRKGQVKLCDFGVS--GELVNSLAGTF 163
Query: 646 IPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTAD 704
S + P D++ GL LLE+ R P E L +L + +
Sbjct: 164 TGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNM 223
Query: 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
+ + D N E K ++ +CL K+P RP+ D+L
Sbjct: 224 PNPE--LKDEPGNGIKWSEEFKDFIK---QCLEKDPTRRPTPWDML 264
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 41.0 bits (96), Expect = 0.001
Identities = 57/271 (21%), Positives = 110/271 (40%), Gaps = 35/271 (12%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G G G ++ G+ + VAI+ + + S +F+ +++ KL H LV G C
Sbjct: 12 LGSGQFGVVHLGKWRAQIKVAIKAIN-EGAMSEEDFIEEAKVMMKLSHPKLVQLYGVC-- 68
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
+ ++++ E++ NG L +++ + L+ +S V +G+++L
Sbjct: 69 -----TQQKPLYIVTEFMENGCLLNYLRQRQGK--LSKDMLLSMCQDVCEGMEYLERN-- 119
Query: 605 PGVFSNNLKITDILLDQNLVAKISSYNLP---LLAENAEKVGHVIPYSGSIDPTNSARGK 661
+L + L+ V K+S + + L E G P S P K
Sbjct: 120 -SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWS-PPEVFNFSK 177
Query: 662 LEEKIDIYDFGLILLEIIV-GR-PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKA 719
K D++ FG+++ E+ G+ P + + + VV R + P + A
Sbjct: 178 YSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYE--------VVEMISRGFR-LYRPKL--A 226
Query: 720 CLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
T+ EV C + P RP+ ++L
Sbjct: 227 S-----MTVYEVMYSCWHEKPEGRPTFAELL 252
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 0.002
Identities = 55/244 (22%), Positives = 97/244 (39%), Gaps = 61/244 (25%)
Query: 478 NFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKK------CHSTRNFMHHIELISKL 530
F+ +GEG+ G +YR R +G VA++ ++M S R I L+ L
Sbjct: 8 EFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLR----EITLLLNL 63
Query: 531 RHRHLVS----ALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRI 586
RH ++V +G + IFL+ EY L S + + + +Q
Sbjct: 64 RHPNIVELKEVVVG---------KHLDSIFLVMEYCEQ-DLASLLD--NMPTPFSESQVK 111
Query: 587 SAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVI 646
+ + +G+Q+LH + +LK++++LL KI+ + L A G
Sbjct: 112 CLMLQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGL------ARTYGLPA 162
Query: 647 -PYS---------------GSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL-KSRKE 689
P + G T + ID++ G IL E++ +PL + E
Sbjct: 163 KPMTPKVVTLWYRAPELLLGCTTYTTA--------IDMWAVGCILAELLAHKPLLPGKSE 214
Query: 690 VDLL 693
++ L
Sbjct: 215 IEQL 218
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309 |
| >gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 0.002
Identities = 56/240 (23%), Positives = 103/240 (42%), Gaps = 45/240 (18%)
Query: 487 EGSQGQMYRGR-LKNGTFVAIRCLKMKK------CHSTRNFMHHIELISKLRHRHLVS-- 537
EG+ G +YR R K G VA++ LKM+K S R I ++ KL+H ++V+
Sbjct: 15 EGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLR----EINILLKLQHPNIVTVK 70
Query: 538 --ALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKG 595
+G S++ +I+++ EYV + L+S + Q ++ + + G
Sbjct: 71 EVVVG---------SNLDKIYMVMEYVEH-DLKSLME--TMKQPFLQSEVKCLMLQLLSG 118
Query: 596 IQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPT 655
+ LH + +LK +++LL+ + KI + L A + G + + T
Sbjct: 119 VAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGL------AREYGSPLKPYTQLVVT 169
Query: 656 NSAR--------GKLEEKIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQAVVTADES 706
R + ID++ G I E++ +PL + E+D L + + T E
Sbjct: 170 LWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEK 229
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293 |
| >gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.002
Identities = 57/244 (23%), Positives = 103/244 (42%), Gaps = 50/244 (20%)
Query: 485 MGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHST-RNFMHHIELISKLRHRHLVSALGHC 542
+GEG+ +Y+GR + G VA++ + + T + I L+ +L+H ++V
Sbjct: 8 LGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVR----- 62
Query: 543 FECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQ-SLTWTQRISAAIGVAKGIQFLHT 601
+ + +++ L+FEY+ + L+ ++ + H + +L S + KGI F H
Sbjct: 63 --LHDVIHTENKLMLVFEYM-DKDLKKYM-DTHGVRGALDPNTVKSFTYQLLKGIAFCHE 118
Query: 602 GIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYS------------ 649
V +LK ++L+++ K++ + L A G IP +
Sbjct: 119 N---RVLHRDLKPQNLLINKRGELKLADFGL------ARAFG--IPVNTFSNEVVTLWYR 167
Query: 650 ------GSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQAVVT 702
GS + S IDI+ G I+ E+I GRPL D L + + T
Sbjct: 168 APDVLLGSRTYSTS--------IDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGT 219
Query: 703 ADES 706
ES
Sbjct: 220 PTES 223
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 0.002
Identities = 62/275 (22%), Positives = 111/275 (40%), Gaps = 35/275 (12%)
Query: 501 GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR--IFLI 558
G VA++ L+ R+F IE++ L+H ++V G C+ S R + L+
Sbjct: 33 GEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCY-------SAGRRNLRLV 85
Query: 559 FEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDIL 618
EY+P G+LR ++ + H + L + + A + KG+++L + +L +IL
Sbjct: 86 MEYLPYGSLRDYLQK-HRER-LDHRKLLLYASQICKGMEYLGS---KRYVHRDLATRNIL 140
Query: 619 LDQNLVAKISSYNLP-LLAENAEKVGHVIPYSGSI---DPTNSARGKLEEKIDIYDFGLI 674
++ KI + L +L ++ E P I P + K D++ FG++
Sbjct: 141 VESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVV 200
Query: 675 LLEIIVGRPLKSRKEVDLL------KNQLQAVVTADESARRSMVDPAVNKACLDESLKTM 728
L E+ + + K V E + + PA C E M
Sbjct: 201 LYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPA-PPGCPAEIYAIM 259
Query: 729 MEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAW 763
E C +P++RPS ++ A QV+
Sbjct: 260 KE----CWNNDPSQRPSFSEL------ALQVEAIR 284
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Score = 40.7 bits (95), Expect = 0.002
Identities = 44/207 (21%), Positives = 96/207 (46%), Gaps = 28/207 (13%)
Query: 485 MGEGSQGQMYRG-RLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCF 543
+G+G+ G +Y + G VAI+ + +++ ++ I ++ + +H ++V+
Sbjct: 27 IGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVN------ 80
Query: 544 ECYFDDSSVS-RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAI-GVAKGIQFLHT 601
Y D V ++++ EY+ G+L ++E + +I+A + ++FLH+
Sbjct: 81 --YLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG-----QIAAVCRECLQALEFLHS 133
Query: 602 GIVPGVFSNNLKITDILLDQNLVAKISSYNL-----PLLAENAEKVGHVIPYSGSIDPTN 656
V ++K +ILL + K++ + P ++ + VG PY + P
Sbjct: 134 N---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVG--TPYW--MAPEV 186
Query: 657 SARGKLEEKIDIYDFGLILLEIIVGRP 683
R K+DI+ G++ +E++ G P
Sbjct: 187 VTRKAYGPKVDIWSLGIMAIEMVEGEP 213
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293 |
| >gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 0.002
Identities = 40/162 (24%), Positives = 62/162 (38%), Gaps = 23/162 (14%)
Query: 479 FDTSAFMGEGSQGQMYRGRLKN-GTFVAIRCLKMK------KCHSTRNFMHHIELISKLR 531
F A +G G G++ K G AI+ LK + S E + R
Sbjct: 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSER 60
Query: 532 HRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQR-ISAAI 590
H LV+ CF+ + + + EY G L H H + R + A
Sbjct: 61 HPFLVNLFA-CFQ------TEDHVCFVMEYAAGGDLMM-----HIHTDVFSEPRAVFYAA 108
Query: 591 GVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632
V G+Q+LH + +LK+ ++LLD KI+ + L
Sbjct: 109 CVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGL 147
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324 |
| >gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 40.2 bits (95), Expect = 0.002
Identities = 50/234 (21%), Positives = 98/234 (41%), Gaps = 59/234 (25%)
Query: 486 GEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHS----TRNFMHHIELISKLRHRHLVSALG 540
GEG+ G +Y+ R K G VA++ K++ + + I L+ +L+H ++V
Sbjct: 8 GEGTYGVVYKARDKKTGEIVALK--KIRLDNEEEGIPSTALREISLLKELKHPNIV---- 61
Query: 541 HCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLH 600
+ + ++L+FEY L+ ++ + S + I + +G+ + H
Sbjct: 62 KLLDVIHTERK---LYLVFEYCDM-DLKKYLDKRPGPLSPNLIKSIMYQL--LRGLAYCH 115
Query: 601 TGIVPGVFSNNLKITDILLDQNLVAKIS------SYNLPLLAENAEKVGHVI------P- 647
+ + +LK +IL++++ V K++ ++ +PL E V+ P
Sbjct: 116 SH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHE----VVTLWYRAPE 168
Query: 648 -------YSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL-KSRKEVDLL 693
YS + +DI+ G I E+I G+PL E+D L
Sbjct: 169 ILLGSKHYSTA--------------VDIWSVGCIFAEMITGKPLFPGDSEIDQL 208
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282 |
| >gnl|CDD|238064 cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 0.003
Identities = 53/252 (21%), Positives = 84/252 (33%), Gaps = 62/252 (24%)
Query: 105 KLPDLKVLRLVSLGL-WGPLSGKISRL---SSLEILNMSSNFLNGAIPQELSILTSLQTL 160
KL L+VLRL L S L SL+ L +S N G IP+ L
Sbjct: 21 KLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNET-GRIPRGL--------- 70
Query: 161 ILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVP 220
+ L L L L +N G +
Sbjct: 71 --------QSLLQGLTKGCGLQELDLSDNALGPDGC--------------------GVLE 102
Query: 221 DFSGLTYLQVLDLENNALGPQ--------FPKVGKKLVTMILSKNKF--RSAIPA--EVS 268
+ LQ L L NN LG + + L ++L +N+ S +
Sbjct: 103 SLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALR 162
Query: 269 SYYQLQRLDLSSNRFVGP----FPQALLSLPSITYLNIADNKLT----GKLFDDLSCNPE 320
+ L+ L+L++N + L + ++ L++ +N LT L + L+
Sbjct: 163 ANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKS 222
Query: 321 LGFVDLSSNLLT 332
L ++L N LT
Sbjct: 223 LEVLNLGDNNLT 234
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). Length = 319 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.003
Identities = 48/215 (22%), Positives = 93/215 (43%), Gaps = 28/215 (13%)
Query: 482 SAFMGEGSQGQMYRG-RLKNGTFVAIRCLKMKK--CHSTRNFMHHIELISKLRHRHLVSA 538
+G G+ G++Y L G +A++ ++++ + + ++++ L+H +LV
Sbjct: 5 GNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKY 64
Query: 539 LGHCFECYFDDSSVSRIFLIF-EYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQ 597
G E + + IF EY GTL + E + + + +G+
Sbjct: 65 YG--VEVHREK------VYIFMEYCSGGTLEE-LLEHGRILDEHVIRVYTLQL--LEGLA 113
Query: 598 FLHT-GIVPGVFSNNLKITDILLDQNLVAKISSYNLPL-LAENAEKVG-HVIPYSGS--- 651
+LH+ GIV ++K +I LD N V K+ + + L N +G V +G+
Sbjct: 114 YLHSHGIV----HRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAY 169
Query: 652 IDPTNSARGKLEEK---IDIYDFGLILLEIIVGRP 683
+ P GK + DI+ G ++LE+ G+
Sbjct: 170 MAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKR 204
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.004
Identities = 54/236 (22%), Positives = 100/236 (42%), Gaps = 45/236 (19%)
Query: 473 EEATNNFDTSAFMGEGSQGQMYRGRLKN-GTFVAIRCLKMKKCHSTRNF----MHHIELI 527
+ + FD +GEG+ GQ+Y+ R K+ G VA++ K++ + F + I+++
Sbjct: 3 KRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALK--KVRLDNEKEGFPITAIREIKIL 60
Query: 528 SKLRHRHLVSALGHCFECYFDDSSV-------SRIFLIFEYVPN---GTLRSWISEGHAH 577
+L HR++V+ E D +L+FEY+ + G L S +
Sbjct: 61 RQLNHRNIVNLK----EIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSED 116
Query: 578 QSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637
++ +++ + FLH I K ++ILL+ K++ + L L
Sbjct: 117 HIKSFMKQLLEGLNYCHKKNFLHRDI---------KCSNILLNNKGQIKLADFGLARLYN 167
Query: 638 NAEKVGHVIPYSGSI-----DPTNSARGKLEEK----IDIYDFGLILLEIIVGRPL 684
+ E PY+ + P G EE+ ID++ G IL E+ +P+
Sbjct: 168 SEESR----PYTNKVITLWYRPPELLLG--EERYGPAIDVWSCGCILGELFTKKPI 217
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302 |
| >gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Score = 39.7 bits (92), Expect = 0.004
Identities = 43/207 (20%), Positives = 95/207 (45%), Gaps = 28/207 (13%)
Query: 485 MGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCF 543
+G+G+ G ++ + G VAI+ + ++K ++ I ++ +L++ ++V+
Sbjct: 27 IGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVN------ 80
Query: 544 ECYFDDSSV--SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHT 601
F DS + +F++ EY+ G+L ++E + Q + + ++FLH
Sbjct: 81 ---FLDSFLVGDELFVVMEYLAGGSLTDVVTE----TCMDEAQIAAVCRECLQALEFLHA 133
Query: 602 GIVPGVFSNNLKITDILLDQNLVAKISSYNL-----PLLAENAEKVGHVIPYSGSIDPTN 656
V ++K ++LL + K++ + P ++ + VG PY + P
Sbjct: 134 N---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMVG--TPYW--MAPEV 186
Query: 657 SARGKLEEKIDIYDFGLILLEIIVGRP 683
R K+DI+ G++ +E++ G P
Sbjct: 187 VTRKAYGPKVDIWSLGIMAIEMVEGEP 213
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296 |
| >gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.004
Identities = 39/201 (19%), Positives = 88/201 (43%), Gaps = 16/201 (7%)
Query: 485 MGEGSQGQMYRGRLKN-GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCF 543
+GEGS G + K+ G VA++ + ++K + + ++ H ++V
Sbjct: 30 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVV------- 82
Query: 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI 603
+ Y ++++ E++ G L ++ H + Q + + V + + +LH
Sbjct: 83 DMYNSYLVGDELWVVMEFLEGGALTDIVT----HTRMNEEQIATVCLSVLRALSYLHN-- 136
Query: 604 VPGVFSNNLKITDILLDQNLVAKISSYNL-PLLAENAEKVGHVIPYSGSIDPTNSARGKL 662
GV ++K ILL + K+S + +++ K ++ + P +R
Sbjct: 137 -QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPY 195
Query: 663 EEKIDIYDFGLILLEIIVGRP 683
++DI+ G++++E+I G P
Sbjct: 196 GTEVDIWSLGIMVIEMIDGEP 216
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 786 | |||
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 100.0 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 100.0 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 100.0 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 100.0 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 100.0 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 100.0 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 100.0 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 100.0 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 100.0 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 100.0 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 100.0 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 100.0 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 100.0 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 100.0 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 100.0 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 100.0 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 100.0 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 100.0 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 100.0 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 100.0 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 100.0 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 100.0 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 100.0 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 100.0 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 100.0 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 100.0 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 100.0 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 100.0 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 100.0 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 100.0 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 100.0 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 100.0 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 100.0 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 100.0 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 100.0 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 100.0 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 100.0 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 100.0 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 100.0 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 100.0 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 100.0 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 100.0 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 100.0 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 100.0 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 100.0 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 100.0 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 100.0 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 100.0 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 100.0 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 100.0 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 100.0 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 100.0 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 100.0 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 100.0 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 100.0 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 100.0 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 99.98 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 99.98 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 99.98 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.98 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.98 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 99.98 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.98 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.98 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.98 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.97 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.97 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.97 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 99.97 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 99.97 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.97 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.97 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.97 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.97 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.97 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.97 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.96 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.96 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.96 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.96 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.96 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.95 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.95 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.94 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.94 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.93 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.93 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.93 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.92 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 99.92 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.92 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.92 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 99.91 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.91 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.91 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 99.91 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.9 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.9 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.89 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 99.89 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.88 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 99.85 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 99.85 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.84 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.83 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.81 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.8 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.8 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.79 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.78 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.78 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.78 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.77 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.77 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.75 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.75 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 99.74 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.74 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 99.72 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.72 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.72 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 99.71 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.7 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.7 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 99.7 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.69 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.68 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.67 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.67 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.67 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.66 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.66 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 99.66 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.65 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.64 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.64 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.63 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.62 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 99.59 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.55 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.53 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.53 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.49 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.47 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.45 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.39 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.38 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.38 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.34 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 99.27 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 99.22 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.17 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.11 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.1 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.05 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 99.03 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 98.97 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 98.95 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 98.95 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 98.94 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 98.93 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 98.9 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 98.9 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 98.89 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 98.88 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 98.84 | |
| KOG1909 | 382 | consensus Ran GTPase-activating protein [RNA proce | 98.84 | |
| KOG1909 | 382 | consensus Ran GTPase-activating protein [RNA proce | 98.79 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 98.77 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 98.75 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.74 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.73 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 98.68 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 98.64 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 98.61 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 98.57 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 98.51 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 98.45 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.32 | |
| KOG2137 | 700 | consensus Protein kinase [Signal transduction mech | 98.29 | |
| PF08263 | 43 | LRRNT_2: Leucine rich repeat N-terminal domain; In | 98.26 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.24 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 98.22 | |
| PRK09902 | 216 | hypothetical protein; Provisional | 98.15 | |
| KOG2982 | 418 | consensus Uncharacterized conserved protein [Funct | 98.14 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 98.09 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 98.04 | |
| PF06293 | 206 | Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; | 98.02 |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-79 Score=751.76 Aligned_cols=264 Identities=25% Similarity=0.454 Sum_probs=204.6
Q ss_pred cCHHHHHHHhcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeec
Q 003926 467 FSLEELEEATNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFEC 545 (786)
Q Consensus 467 ~~~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~ 545 (786)
++++++. ..|+..+.||+|+||.||+|+. .+|..||||+++..... ..+|++++++++|||||+++|+|.+
T Consensus 683 ~~~~~~~---~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~- 754 (968)
T PLN00113 683 ITINDIL---SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRS- 754 (968)
T ss_pred hhHHHHH---hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEc-
Confidence 4455554 4577788999999999999996 57899999998754321 2356889999999999999999975
Q ss_pred cccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcc
Q 003926 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVA 625 (786)
Q Consensus 546 ~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~ 625 (786)
.+..|+|||||++|+|.++++. ++|.++.+++.|+|+||+|||+.+.++|+|||+||+||++|.++.+
T Consensus 755 ------~~~~~lv~Ey~~~g~L~~~l~~------l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~ 822 (968)
T PLN00113 755 ------EKGAYLIHEYIEGKNLSEVLRN------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEP 822 (968)
T ss_pred ------CCCCEEEEeCCCCCcHHHHHhc------CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCce
Confidence 3457999999999999999963 8999999999999999999998777899999999999999999988
Q ss_pred cccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCch--hHHHHHHHHHHHHh
Q 003926 626 KISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKE--VDLLKNQLQAVVTA 703 (786)
Q Consensus 626 kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~--~~~~~~~~~~~~~~ 703 (786)
++. ||.+...... ....++..|+|||+.....|+.|+|||||||++|||+||++|++... ...+.+|.......
T Consensus 823 ~~~-~~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 898 (968)
T PLN00113 823 HLR-LSLPGLLCTD---TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSD 898 (968)
T ss_pred EEE-eccccccccC---CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCc
Confidence 875 5554322111 12245678999999988899999999999999999999999985421 12233333222111
Q ss_pred ccccccccccccccc--cCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 704 DESARRSMVDPAVNK--ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 704 ~~~~~~~~~d~~~~~--~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
......+|+.+.. ....+.+.++++++.+||+.||++||||+||+++++..
T Consensus 899 --~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~ 951 (968)
T PLN00113 899 --CHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESA 951 (968)
T ss_pred --cchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHh
Confidence 1223344554422 23345667888999999999999999999999999744
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-56 Score=482.11 Aligned_cols=282 Identities=35% Similarity=0.677 Sum_probs=242.2
Q ss_pred CccccCHHHHHHHhcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeee
Q 003926 463 AYRTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHC 542 (786)
Q Consensus 463 ~~~~~~~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~ 542 (786)
..+.|+++++..||++|+..+.||+|+||.||+|.+++|..||||++........++|.+|++++++++|||+|+|+|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 35679999999999999999999999999999999999999999988765432156799999999999999999999999
Q ss_pred eeccccCCCCc-eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC
Q 003926 543 FECYFDDSSVS-RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ 621 (786)
Q Consensus 543 ~~~~~~~~~~~-~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~ 621 (786)
.+ .+ +.+||||||++|+|.++|+..... .++|.+|++||.++|+||+|||..+.|+|||||||++|||||+
T Consensus 141 ~e-------~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~ 212 (361)
T KOG1187|consen 141 LE-------GGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDE 212 (361)
T ss_pred ec-------CCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECC
Confidence 86 33 589999999999999999975443 8999999999999999999999999999999999999999999
Q ss_pred CCcccccCCCccccccc-ccccccc-cccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCch---hHHHHHH
Q 003926 622 NLVAKISSYNLPLLAEN-AEKVGHV-IPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKE---VDLLKNQ 696 (786)
Q Consensus 622 ~~~~kl~DfGl~~~~~~-~~~~~~~-~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~---~~~~~~~ 696 (786)
++++||+|||+++.... ....... .++.+|+|||+...+..|+|+|||||||+|+||+||+++.+... ...+..|
T Consensus 213 ~~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w 292 (361)
T KOG1187|consen 213 DFNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEW 292 (361)
T ss_pred CCCEEccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHH
Confidence 99999999999976654 3332233 78889999999999999999999999999999999998876432 2234555
Q ss_pred HHHHHHhcccccccccccccc-ccCcH-HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 697 LQAVVTADESARRSMVDPAVN-KACLD-ESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 697 ~~~~~~~~~~~~~~~~d~~~~-~~~~~-~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
....... ....+++||.+. ..... +.+..+..++.+|++.+|.+||+|.||++++.
T Consensus 293 ~~~~~~~--~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~ 350 (361)
T KOG1187|consen 293 AKPLLEE--GKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELE 350 (361)
T ss_pred HHHHHHC--cchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHH
Confidence 4333332 267889999987 44443 68888999999999999999999999999884
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-47 Score=406.95 Aligned_cols=253 Identities=25% Similarity=0.457 Sum_probs=204.1
Q ss_pred ccCccCCCCCceeEEEEecCCcEEEEEEecccCCCC--hHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEEE
Q 003926 481 TSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHS--TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLI 558 (786)
Q Consensus 481 ~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~--~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV 558 (786)
..+.||.|+||+||+|.++....||||++....... .++|.+|+.+|++++|||||+|+|+|.+. ....++|
T Consensus 45 ~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~------~~~~~iV 118 (362)
T KOG0192|consen 45 IEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSP------PGSLCIV 118 (362)
T ss_pred hhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC------CCceEEE
Confidence 345699999999999999854449999998665433 45899999999999999999999999752 1158999
Q ss_pred EecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCC-ccccCCCCCceeecCCC-cccccCCCccccc
Q 003926 559 FEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPG-VFSNNLKITDILLDQNL-VAKISSYNLPLLA 636 (786)
Q Consensus 559 ~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~-ivHrdlk~~NILld~~~-~~kl~DfGl~~~~ 636 (786)
||||++|+|+++++.. ....++|..++.+|.|||+||.|||+. . |||||||++|||++.++ ++||+|||+++..
T Consensus 119 tEy~~~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~ 194 (362)
T KOG0192|consen 119 TEYMPGGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREK 194 (362)
T ss_pred EEeCCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceee
Confidence 9999999999999874 245799999999999999999999997 5 99999999999999997 9999999999766
Q ss_pred ccc-cccccccccccccCccccc--cCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccccc
Q 003926 637 ENA-EKVGHVIPYSGSIDPTNSA--RGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVD 713 (786)
Q Consensus 637 ~~~-~~~~~~~~~~~~~aPe~~~--~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 713 (786)
... .......||..|||||.+. ...|+.|+|||||||++|||+||+.||.......+... +.... .+
T Consensus 195 ~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~---v~~~~---~R---- 264 (362)
T KOG0192|consen 195 VISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASA---VVVGG---LR---- 264 (362)
T ss_pred ccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHH---HHhcC---CC----
Confidence 543 3333467889999999998 56899999999999999999999999987654222211 11111 11
Q ss_pred ccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 714 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
|.++.. ....+..++.+||..||++||++.||+..+....
T Consensus 265 p~~p~~----~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~ 304 (362)
T KOG0192|consen 265 PPIPKE----CPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIM 304 (362)
T ss_pred CCCCcc----CCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHH
Confidence 222222 3345667788999999999999999999997553
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-47 Score=382.63 Aligned_cols=263 Identities=21% Similarity=0.343 Sum_probs=214.4
Q ss_pred cCHHHHHHHhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeee
Q 003926 467 FSLEELEEATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFE 544 (786)
Q Consensus 467 ~~~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~ 544 (786)
++..|++. .+.||+|..|+|||++++ +++.+|+|.+..... ...+++.+|++++++.+||+||.++|.|+.
T Consensus 76 i~~~dle~-------~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~ 148 (364)
T KOG0581|consen 76 ISLSDLER-------LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYS 148 (364)
T ss_pred cCHHHhhh-------hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEe
Confidence 45556654 588999999999999976 689999999964433 346789999999999999999999999875
Q ss_pred ccccCCCCc-eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC
Q 003926 545 CYFDDSSVS-RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL 623 (786)
Q Consensus 545 ~~~~~~~~~-~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~ 623 (786)
.. ...++||||.+|||++++... ..+++...-+|+.+|.+||.|||+. .+||||||||+|||++..+
T Consensus 149 -------~~~~isI~mEYMDgGSLd~~~k~~---g~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskG 216 (364)
T KOG0581|consen 149 -------NGEEISICMEYMDGGSLDDILKRV---GRIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKG 216 (364)
T ss_pred -------CCceEEeehhhcCCCCHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCC
Confidence 23 599999999999999999763 3588999999999999999999963 3999999999999999999
Q ss_pred cccccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCc--hhHHHHHHHHHHH
Q 003926 624 VAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRK--EVDLLKNQLQAVV 701 (786)
Q Consensus 624 ~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~--~~~~~~~~~~~~~ 701 (786)
++||||||.++..... ...+..||..||+||.+.+..|+.++||||||++++|+++|+.|+... ........+....
T Consensus 217 eVKicDFGVS~~lvnS-~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv 295 (364)
T KOG0581|consen 217 EVKICDFGVSGILVNS-IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIV 295 (364)
T ss_pred CEEeccccccHHhhhh-hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHh
Confidence 9999999999766544 345677899999999999999999999999999999999999888653 1222333333333
Q ss_pred HhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 003926 702 TADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760 (786)
Q Consensus 702 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~ 760 (786)
... .|.++.. ....++.+++..|+++||.+||++.|+++|+|+.+...
T Consensus 296 ~~p--------pP~lP~~---~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~ 343 (364)
T KOG0581|consen 296 DEP--------PPRLPEG---EFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFED 343 (364)
T ss_pred cCC--------CCCCCcc---cCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhccc
Confidence 222 1333322 23456778888999999999999999999999887533
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-47 Score=400.10 Aligned_cols=247 Identities=25% Similarity=0.423 Sum_probs=204.1
Q ss_pred ccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEEEEe
Q 003926 481 TSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFE 560 (786)
Q Consensus 481 ~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV~E 560 (786)
..+.||+|-||+||.|.++....||||.++... ...++|.+|+++|++++|+|||+++|+|.. .+.+|||||
T Consensus 210 l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~-------~~piyIVtE 281 (468)
T KOG0197|consen 210 LIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTK-------QEPIYIVTE 281 (468)
T ss_pred HHHHhcCCccceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEec-------CCceEEEEE
Confidence 357899999999999999987899999998753 346889999999999999999999999975 346899999
Q ss_pred cCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccccccc
Q 003926 561 YVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE 640 (786)
Q Consensus 561 y~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~ 640 (786)
||++|+|.++|+.. .+..+...+.+.++.|||+||+||+++ ++|||||.++|||++++..+||+|||+++...+..
T Consensus 282 ~m~~GsLl~yLr~~-~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~ 357 (468)
T KOG0197|consen 282 YMPKGSLLDYLRTR-EGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIGDDE 357 (468)
T ss_pred ecccCcHHHHhhhc-CCCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccCCCc
Confidence 99999999999873 345789999999999999999999998 99999999999999999999999999999554433
Q ss_pred cccc--ccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccccccccccccc
Q 003926 641 KVGH--VIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVN 717 (786)
Q Consensus 641 ~~~~--~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 717 (786)
.... ..-...|.|||.+..++|+.|||||||||+||||+| |+.|+......++.+.+..... +
T Consensus 358 Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyR--------l------ 423 (468)
T KOG0197|consen 358 YTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYR--------L------ 423 (468)
T ss_pred eeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCc--------C------
Confidence 2211 112346889999999999999999999999999999 8999887665555444433211 1
Q ss_pred ccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 718 KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 718 ~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
.+|+.++..+.+++..||+.+|++|||++.+...+.
T Consensus 424 -p~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~ 459 (468)
T KOG0197|consen 424 -PRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLE 459 (468)
T ss_pred -CCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHH
Confidence 122334446777888999999999999997776664
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-46 Score=415.07 Aligned_cols=254 Identities=23% Similarity=0.417 Sum_probs=209.5
Q ss_pred hcCCCccCccCCCCCceeEEEEec------CCcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeeecccc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFD 548 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~ 548 (786)
+.+....+.||+|.||+||+|+.. +.+.||||.++..... ..++|.+|+++++.++|||||+|+|+|.+
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~---- 560 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCRE---- 560 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEcc----
Confidence 444556788999999999999853 3578999999987655 67899999999999999999999999987
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCCC-----------CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCce
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGHA-----------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDI 617 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~~-----------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NI 617 (786)
++.+|+|+|||..|||.++|..... ..+|+-.+.+.||.|||.||+||-+. .+|||||..+|+
T Consensus 561 ---~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNC 634 (774)
T KOG1026|consen 561 ---GDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNC 634 (774)
T ss_pred ---CCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhc
Confidence 5679999999999999999974211 22388999999999999999999998 999999999999
Q ss_pred eecCCCcccccCCCcccccccccccc---cccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHH
Q 003926 618 LLDQNLVAKISSYNLPLLAENAEKVG---HVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLL 693 (786)
Q Consensus 618 Lld~~~~~kl~DfGl~~~~~~~~~~~---~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~ 693 (786)
|+.+++.+||+|||+++..-..+.+. ...-...||+||.+..++||++||||||||||||+++ |+.|+.+...+++
T Consensus 635 LVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EV 714 (774)
T KOG1026|consen 635 LVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEV 714 (774)
T ss_pred eeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHH
Confidence 99999999999999997553322222 2233467999999999999999999999999999998 8988876555555
Q ss_pred HHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 694 KNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
.+.++.. .+ -.|++.++.++.+|+..||+.+|++||+++||-..|+
T Consensus 715 Ie~i~~g--------------~l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~ 760 (774)
T KOG1026|consen 715 IECIRAG--------------QL-LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQ 760 (774)
T ss_pred HHHHHcC--------------Cc-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHH
Confidence 4443321 01 2244555567888999999999999999999999986
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-45 Score=374.43 Aligned_cols=254 Identities=24% Similarity=0.361 Sum_probs=205.1
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
..+|...+.||.|+||+||+|+++ ++..||||++.+... ...+....|+++|+.++|||||.++++++. .
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~-------~ 81 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIED-------D 81 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEec-------C
Confidence 456778888999999999999965 689999999987742 234567899999999999999999999876 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCC------Cccc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN------LVAK 626 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~------~~~k 626 (786)
+..|||||||.+|||.+||+.. ..++......++.|+|.||++||++ +||||||||.||||+.. -.+|
T Consensus 82 ~~i~lVMEyC~gGDLs~yi~~~---~~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LK 155 (429)
T KOG0595|consen 82 DFIYLVMEYCNGGDLSDYIRRR---GRLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLK 155 (429)
T ss_pred CeEEEEEEeCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEE
Confidence 6799999999999999999874 3689999999999999999999998 99999999999999875 4579
Q ss_pred ccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccc
Q 003926 627 ISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADES 706 (786)
Q Consensus 627 l~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (786)
|+|||+|+.........+.+|++.|||||++..++|+.|+|+||.|+|+|||++|++||+.....++...++.....
T Consensus 156 IADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~--- 232 (429)
T KOG0595|consen 156 IADFGFARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEI--- 232 (429)
T ss_pred ecccchhhhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccc---
Confidence 99999999888777777889999999999999999999999999999999999999999987666655433221110
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
. ...+.......+++...-++.+|.+|-++.+-..+...
T Consensus 233 --~--------~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l 271 (429)
T KOG0595|consen 233 --V--------PVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFL 271 (429)
T ss_pred --c--------CchhhhccCchhhhhhHHHhcCccccCchHHhhhhhhc
Confidence 0 01111112223345555666777777777666655543
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-45 Score=372.56 Aligned_cols=256 Identities=23% Similarity=0.336 Sum_probs=210.3
Q ss_pred cCCCccCccCCCCCceeEEEE-ecCCcEEEEEEecccCCCC-------hHHHHHHHHHHhcCCCCCcceeeeeeeecccc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHS-------TRNFMHHIELISKLRHRHLVSALGHCFECYFD 548 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~-------~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~ 548 (786)
+.|...+.+|+|+||.|-+|. .++|+.||||++.+.+... .....+|+++|++++|||||++++++..
T Consensus 172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~---- 247 (475)
T KOG0615|consen 172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEV---- 247 (475)
T ss_pred ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeec----
Confidence 346678899999999999998 5689999999998664322 1234699999999999999999999875
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCC---Ccc
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN---LVA 625 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~---~~~ 625 (786)
.+..|+|||||++|+|.+.+-.. ..+.......++.|++.|+.|||+. +|+||||||+|||+..+ ..+
T Consensus 248 ---~ds~YmVlE~v~GGeLfd~vv~n---k~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~ll 318 (475)
T KOG0615|consen 248 ---PDSSYMVLEYVEGGELFDKVVAN---KYLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLL 318 (475)
T ss_pred ---CCceEEEEEEecCccHHHHHHhc---cccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEE
Confidence 45679999999999999998753 3577777788999999999999998 99999999999999866 789
Q ss_pred cccCCCcccccccccccccccccccccCccccccCC---CCcccceeehhHHHHHHHhCCCCCCCchhHH-HHHHHHHHH
Q 003926 626 KISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGK---LEEKIDIYDFGLILLEIIVGRPLKSRKEVDL-LKNQLQAVV 701 (786)
Q Consensus 626 kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~---~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~-~~~~~~~~~ 701 (786)
||+|||+|+.........+.+||+.|.|||++.... +..|+|+||+|||||-+++|.+||.+.-.+. +.+++....
T Consensus 319 KItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~ 398 (475)
T KOG0615|consen 319 KITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGR 398 (475)
T ss_pred EecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCc
Confidence 999999999887777778899999999999987654 3458899999999999999999997654333 444443322
Q ss_pred HhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 702 TADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 702 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.... | ....+...+.++++.++|..||++|||+.|+++|+|+..
T Consensus 399 y~f~--------p----~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~ 442 (475)
T KOG0615|consen 399 YAFG--------P----LQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKD 442 (475)
T ss_pred cccc--------C----hhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhc
Confidence 2111 1 123445567788999999999999999999999999884
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-44 Score=386.56 Aligned_cols=252 Identities=21% Similarity=0.393 Sum_probs=214.6
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
..|...+.||+|||+.||+++. .+|+.||+|++.+.. ....+...+||++.++|+|||||++++++.+ .
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FED-------s 90 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFED-------S 90 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeec-------C
Confidence 3578889999999999999996 889999999998643 3446678999999999999999999999875 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
++.|||.|+|++|+|..+++.+ ..+++.+...+..||+.||.|||+. +|||||||..|+++++++++||+||||
T Consensus 91 ~nVYivLELC~~~sL~el~Krr---k~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGL 164 (592)
T KOG0575|consen 91 NNVYIVLELCHRGSLMELLKRR---KPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGL 164 (592)
T ss_pred CceEEEEEecCCccHHHHHHhc---CCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccce
Confidence 6799999999999999999843 4699999999999999999999998 999999999999999999999999999
Q ss_pred ccccc-cccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 633 PLLAE-NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 633 ~~~~~-~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
|.... +.++..+.+||+.|+|||++.....+..+||||+|||||.|++|+|||+.....+....+...-+.
T Consensus 165 At~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~-------- 236 (592)
T KOG0575|consen 165 ATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYS-------- 236 (592)
T ss_pred eeeecCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcc--------
Confidence 96665 446677889999999999999888999999999999999999999999877655443333221110
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.+.....+..+++...|+.||.+|||+++|+.|.+|..
T Consensus 237 --------~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~ 274 (592)
T KOG0575|consen 237 --------MPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKS 274 (592)
T ss_pred --------cccccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhC
Confidence 11122334567888999999999999999999999854
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-44 Score=386.72 Aligned_cols=258 Identities=21% Similarity=0.379 Sum_probs=206.1
Q ss_pred CCccCccCCCCCceeEEEEec----CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 479 FDTSAFMGEGSQGQMYRGRLK----NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
..+.++||.|.||+||+|+++ ....||||.++.... ..+.+|+.|+.||.++.||||++|.|+... ..
T Consensus 631 i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTk-------s~ 703 (996)
T KOG0196|consen 631 VKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTK-------SK 703 (996)
T ss_pred eEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEec-------Cc
Confidence 356789999999999999976 356899999997654 346789999999999999999999998754 46
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..+||.|||+||+|+.+|+..++ .+++.+.+.+..+||.||.||-+. ++|||||.++|||++.+..+||+|||++
T Consensus 704 PvMIiTEyMENGsLDsFLR~~DG--qftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDFGLS 778 (996)
T KOG0196|consen 704 PVMIITEYMENGSLDSFLRQNDG--QFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDFGLS 778 (996)
T ss_pred eeEEEhhhhhCCcHHHHHhhcCC--ceEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEeccccce
Confidence 78999999999999999997653 599999999999999999999998 9999999999999999999999999999
Q ss_pred ccccccc-cc-ccccc--cccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccccc
Q 003926 634 LLAENAE-KV-GHVIP--YSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESAR 708 (786)
Q Consensus 634 ~~~~~~~-~~-~~~~~--~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (786)
+..++.. .. ....| ...|.|||.+..+++|.+||||||||||||.++ |.+|+-+..-.++.+-+......
T Consensus 779 Rvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRL----- 853 (996)
T KOG0196|consen 779 RVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRL----- 853 (996)
T ss_pred eecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCC-----
Confidence 8775433 11 11111 246889999999999999999999999999887 88886554433333322211110
Q ss_pred cccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhhhhh
Q 003926 709 RSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAW 763 (786)
Q Consensus 709 ~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~~~~ 763 (786)
+ | +.+|+ ..+.+|++.||++|-.+||++.||+.+|.-.-+.++..
T Consensus 854 P----p--PmDCP----~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~SL 898 (996)
T KOG0196|consen 854 P----P--PMDCP----AALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPNSL 898 (996)
T ss_pred C----C--CCCCc----HHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCchhh
Confidence 0 1 12344 45778888999999999999999999997544434333
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-42 Score=337.72 Aligned_cols=267 Identities=19% Similarity=0.301 Sum_probs=207.1
Q ss_pred CCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
.|+....+|+|+||+|||++.+ +|+.||||++...... -.+-.++|+++|++++|+|+|.++.+|.. ...
T Consensus 3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrr-------krk 75 (396)
T KOG0593|consen 3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRR-------KRK 75 (396)
T ss_pred HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHh-------cce
Confidence 3566788999999999999965 6999999999766432 23567999999999999999999999875 567
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.+||+|||+.-=|.++=+. ...++.....++..|+++|+.|+|.+ +||||||||+|||+..++.+|+||||+|+
T Consensus 76 lhLVFE~~dhTvL~eLe~~---p~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR 149 (396)
T KOG0593|consen 76 LHLVFEYCDHTVLHELERY---PNGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFAR 149 (396)
T ss_pred eEEEeeecchHHHHHHHhc---cCCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhH
Confidence 8999999998444443322 23578888899999999999999998 99999999999999999999999999998
Q ss_pred ccc-cccccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCc-hhHHHHHHHHHHHHhcc------
Q 003926 635 LAE-NAEKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRK-EVDLLKNQLQAVVTADE------ 705 (786)
Q Consensus 635 ~~~-~~~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~-~~~~~~~~~~~~~~~~~------ 705 (786)
... ....++....|..|.|||.+.+ .+|+..+||||.||++.||++|.+.|.+. +.+.+..+........+
T Consensus 150 ~L~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF 229 (396)
T KOG0593|consen 150 TLSAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIF 229 (396)
T ss_pred hhcCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHh
Confidence 776 5556666777889999998876 67999999999999999999999998764 44444433322111100
Q ss_pred ---c-----cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 706 ---S-----ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 706 ---~-----~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
. ..++.-+++....-.......+++++..|++.||++|++-+|++.|.+|-.
T Consensus 230 ~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~ 289 (396)
T KOG0593|consen 230 SSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDG 289 (396)
T ss_pred ccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHHH
Confidence 0 011111222111122233446789999999999999999999999998744
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-42 Score=350.64 Aligned_cols=265 Identities=19% Similarity=0.348 Sum_probs=209.9
Q ss_pred hcCCCccCccCCCCCceeEEEE-ecCCcEEEEEEecccCCCCh-HHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHST-RNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~-~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
..+|+..++||.|..++||+|+ .+.++.||||++..+++... ++..+|++.|+.++|||||+++..+.. .+
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv-------~~ 97 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVV-------DS 97 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEe-------cc
Confidence 4568888999999999999998 67789999999998887654 788999999999999999999876654 56
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
.+|+||.||.+||+.++++..- ...++......|..++.+||.|||++ +.||||||+.|||||.+|.+||+|||.+
T Consensus 98 ~LWvVmpfMa~GS~ldIik~~~-~~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvs 173 (516)
T KOG0582|consen 98 ELWVVMPFMAGGSLLDIIKTYY-PDGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVS 173 (516)
T ss_pred eeEEeehhhcCCcHHHHHHHHc-cccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceee
Confidence 7999999999999999998532 23488889999999999999999998 9999999999999999999999999997
Q ss_pred -ccccccccc----ccccccccccCcccccc--CCCCcccceeehhHHHHHHHhCCCCCCCchhHH-HHHHHHHHHHhcc
Q 003926 634 -LLAENAEKV----GHVIPYSGSIDPTNSAR--GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL-LKNQLQAVVTADE 705 (786)
Q Consensus 634 -~~~~~~~~~----~~~~~~~~~~aPe~~~~--~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~-~~~~~~~~~~~~~ 705 (786)
.+.+.+.+. ....+++.|||||++.. ..|+.|+|||||||+..||++|..||....... +...++...+
T Consensus 174 a~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp--- 250 (516)
T KOG0582|consen 174 ASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPP--- 250 (516)
T ss_pred eeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCC---
Confidence 333333222 34478899999999543 359999999999999999999999998765432 2222221100
Q ss_pred ccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 706 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
...-.....+......+.+.+++-.|+++||.+|||++++++|.||...
T Consensus 251 ----~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~ 299 (516)
T KOG0582|consen 251 ----TLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKA 299 (516)
T ss_pred ----CcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhc
Confidence 0000011111122233467788889999999999999999999999874
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-43 Score=341.26 Aligned_cols=256 Identities=17% Similarity=0.317 Sum_probs=203.6
Q ss_pred CCCccCccCCCCCceeEEEE-ecCCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 478 NFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
+|++.++||+|+||+|||+. ..+|..||.|.++-... ...+....|+.+|++++|||||++++.-.. .....
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~-----~~~ev 94 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFI-----EDNEV 94 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhh-----ccchh
Confidence 45667899999999999998 67899999999874332 234678999999999999999999884321 12344
Q ss_pred EEEEEecCCCCChhHHhhcC-CCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCC--ccccCCCCCceeecCCCcccccCCC
Q 003926 555 IFLIFEYVPNGTLRSWISEG-HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPG--VFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~--ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
++||||||..|||...|+.- ..+..++....+++..|+++||.++|.. .+. |+||||||.||+++.++.+|++|||
T Consensus 95 lnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~-~~r~~VmHRDIKPaNIFl~~~gvvKLGDfG 173 (375)
T KOG0591|consen 95 LNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSK-IPRGTVMHRDIKPANIFLTANGVVKLGDFG 173 (375)
T ss_pred hHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhcc-ccccceeeccCcchheEEcCCCceeeccch
Confidence 89999999999999998742 2345689999999999999999999983 335 8999999999999999999999999
Q ss_pred ccccccccccc-ccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 632 LPLLAENAEKV-GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 632 l~~~~~~~~~~-~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
++++....... ....||++||.||.+....|+.||||||+||++|||..-++||.+.+...+.+.+... ..
T Consensus 174 L~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qg------d~-- 245 (375)
T KOG0591|consen 174 LGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQG------DY-- 245 (375)
T ss_pred hHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcC------CC--
Confidence 99887655443 3467899999999999999999999999999999999999999887655544333211 11
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNL 753 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l 753 (786)
|.++. +--..++.+++..|+..||+.||+.-.++...
T Consensus 246 ---~~~p~---~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di 282 (375)
T KOG0591|consen 246 ---PPLPD---EHYSTDLRELINMCIAVDPEQRPDTVPYVQDI 282 (375)
T ss_pred ---CCCcH---HHhhhHHHHHHHHHccCCcccCCCcchHHHHH
Confidence 11111 22334566788899999999999965555444
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-43 Score=360.28 Aligned_cols=269 Identities=20% Similarity=0.315 Sum_probs=217.9
Q ss_pred cCCCccCccCCCCCceeEEEE-ecCCcEEEEEEecccCCCChHH--HHHHHHHHhcCC-CCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTRN--FMHHIELISKLR-HRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~--f~~E~~~l~~l~-H~NIv~l~g~~~~~~~~~~~~ 552 (786)
+.|...+.||.|.||.||+|+ ..+|..||||+++.+-.. .++ =+||++.|++++ |||||++..++.+. .
T Consensus 10 ~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-~ee~~nLREvksL~kln~hpniikL~Evi~d~------~ 82 (538)
T KOG0661|consen 10 DRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNPHPNIIKLKEVIRDN------D 82 (538)
T ss_pred HHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc-HHHHHHHHHHHHHHhcCCCCcchhhHHHhhcc------C
Confidence 446667899999999999998 567999999999876543 344 368999999999 99999999988762 2
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
..+++|||||+. +|+++++++ ...++......|+.||.+||+|+|.+ |+.|||+||+|||+.....+||+|||+
T Consensus 83 ~~L~fVfE~Md~-NLYqLmK~R--~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGL 156 (538)
T KOG0661|consen 83 RILYFVFEFMDC-NLYQLMKDR--NRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGL 156 (538)
T ss_pred ceEeeeHHhhhh-hHHHHHhhc--CCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEeccccc
Confidence 379999999986 999999875 45799999999999999999999998 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCccccc-cCCCCcccceeehhHHHHHHHhCCCCCCCc-hhHHHHHHHHHHHHhccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSA-RGKLEEKIDIYDFGLILLEIIVGRPLKSRK-EVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~-~~~~t~ksDVwSfGvvl~ElltG~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
|+.......++....|..|.|||.+. .+.|+.+.|+|++|||++|+.+-+|.|.+. +.+++.++.+......+..+.+
T Consensus 157 ARev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~e 236 (538)
T KOG0661|consen 157 AREVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPE 236 (538)
T ss_pred ccccccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchh
Confidence 99887777777788899999999864 567999999999999999999999998764 4566666555444433322221
Q ss_pred c------c---ccccc----ccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 711 M------V---DPAVN----KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 711 ~------~---d~~~~----~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
. + -|... .........+.++++.+|++.||++|||+.|.++|++|...
T Consensus 237 g~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~ 297 (538)
T KOG0661|consen 237 GYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVG 297 (538)
T ss_pred HHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCcccccc
Confidence 0 0 01111 11112245677889999999999999999999999997654
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-42 Score=363.33 Aligned_cols=248 Identities=23% Similarity=0.410 Sum_probs=202.2
Q ss_pred cCHHHHHHHhcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeecc
Q 003926 467 FSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECY 546 (786)
Q Consensus 467 ~~~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~ 546 (786)
+.|++|. ..+.||.|+-|.||+|+++ ++.||||+++.-+ ..+|+.|++|+|+||+.|.|+|..
T Consensus 121 iPFe~Is-------ELeWlGSGaQGAVF~Grl~-netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtq-- 183 (904)
T KOG4721|consen 121 IPFEEIS-------ELEWLGSGAQGAVFLGRLH-NETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQ-- 183 (904)
T ss_pred CCHHHhh-------hhhhhccCcccceeeeecc-CceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecC--
Confidence 5566664 3588999999999999997 6899999876443 357899999999999999999975
Q ss_pred ccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCccc
Q 003926 547 FDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAK 626 (786)
Q Consensus 547 ~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~k 626 (786)
..-+|||||||+.|-|+.+|+.. ..++.........+||.||+|||.+ .|||||||+-||||..+-.+|
T Consensus 184 -----sPcyCIiMEfCa~GqL~~VLka~---~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VK 252 (904)
T KOG4721|consen 184 -----SPCYCIIMEFCAQGQLYEVLKAG---RPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVK 252 (904)
T ss_pred -----CceeEEeeeccccccHHHHHhcc---CccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEE
Confidence 35689999999999999999864 4577777788899999999999998 999999999999999999999
Q ss_pred ccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccc
Q 003926 627 ISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADES 706 (786)
Q Consensus 627 l~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (786)
|+|||-++......+.-.++||..|||||++....+++|+||||||||||||+||..|+.+-+...+.+ +
T Consensus 253 IsDFGTS~e~~~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIw----------G 322 (904)
T KOG4721|consen 253 ISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIW----------G 322 (904)
T ss_pred eccccchHhhhhhhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEE----------e
Confidence 999999987766554456788999999999999999999999999999999999999987543322110 0
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
.....+.-.++..|+ .-+.-++.+||+..|..||++++|+.|+..+
T Consensus 323 VGsNsL~LpvPstcP----~GfklL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 323 VGSNSLHLPVPSTCP----DGFKLLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred ccCCcccccCcccCc----hHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 111112222233344 3455677799999999999999999999754
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-42 Score=362.71 Aligned_cols=254 Identities=19% Similarity=0.352 Sum_probs=209.7
Q ss_pred cCCCccCccCCCCCceeEEEE-ecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
..|..-..||+|+.|.||.|+ ..+++.||||++.......++-.++|+.+|+..+|+|||.++..++. .+++
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv-------~deL 345 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLV-------GDEL 345 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcc-------ccee
Confidence 345666889999999999998 56799999999998776666778999999999999999999988765 3679
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
|+|||||++|+|.+.+.. ..++..+...|+.++++||.|||.. +|+|||||.+|||++.++.+||+|||++..
T Consensus 346 WVVMEym~ggsLTDvVt~----~~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaq 418 (550)
T KOG0578|consen 346 WVVMEYMEGGSLTDVVTK----TRMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQ 418 (550)
T ss_pred EEEEeecCCCchhhhhhc----ccccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeec
Confidence 999999999999999875 3589999999999999999999998 999999999999999999999999999865
Q ss_pred ccccc-ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccc
Q 003926 636 AENAE-KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDP 714 (786)
Q Consensus 636 ~~~~~-~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 714 (786)
..... ......||++|||||+.....|+.|+||||+||+++||+.|+|||-.+..-... ++.+ .. ...++-
T Consensus 419 i~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAl-yLIa--~n---g~P~lk-- 490 (550)
T KOG0578|consen 419 ISEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL-YLIA--TN---GTPKLK-- 490 (550)
T ss_pred cccccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHH-HHHh--hc---CCCCcC--
Confidence 54433 556788999999999999999999999999999999999999998653321111 1100 11 111111
Q ss_pred cccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 715 AVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 715 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.++.....+.++..+||+.|+++||++.|+|+|+++..
T Consensus 491 -----~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~ 528 (550)
T KOG0578|consen 491 -----NPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKM 528 (550)
T ss_pred -----CccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhh
Confidence 12333445667777999999999999999999999854
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-42 Score=367.44 Aligned_cols=267 Identities=21% Similarity=0.341 Sum_probs=212.6
Q ss_pred ccCHHHHHHHhcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeee
Q 003926 466 TFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCF 543 (786)
Q Consensus 466 ~~~~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~ 543 (786)
..+.++++...+.+...+.||+|.||+||||+|.. .||||.++..... ..++|.+||.++++-||.||+-|.|||.
T Consensus 381 s~s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~ 458 (678)
T KOG0193|consen 381 SDSLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACM 458 (678)
T ss_pred CccccccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhc
Confidence 34456777777777888999999999999999873 6999999877543 3578999999999999999999999997
Q ss_pred eccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC
Q 003926 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL 623 (786)
Q Consensus 544 ~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~ 623 (786)
. ....||.-+|++-+|+.+||-.+ ..++..+.+.||.|||+||.|||.. +|||||||+.||++++++
T Consensus 459 ~--------p~~AIiTqwCeGsSLY~hlHv~e--tkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~ 525 (678)
T KOG0193|consen 459 N--------PPLAIITQWCEGSSLYTHLHVQE--TKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDL 525 (678)
T ss_pred C--------CceeeeehhccCchhhhhccchh--hhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCC
Confidence 5 33589999999999999998643 5799999999999999999999997 999999999999999999
Q ss_pred cccccCCCccccccc---ccccccccccccccCccccccC---CCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHH
Q 003926 624 VAKISSYNLPLLAEN---AEKVGHVIPYSGSIDPTNSARG---KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQL 697 (786)
Q Consensus 624 ~~kl~DfGl~~~~~~---~~~~~~~~~~~~~~aPe~~~~~---~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~ 697 (786)
.+||+|||++..... ........+..-|||||+++.+ .|+..+||||||||+|||+||..|+.....+.+...+
T Consensus 526 kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmV 605 (678)
T KOG0193|consen 526 KVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMV 605 (678)
T ss_pred cEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEe
Confidence 999999999854432 2223334455679999998754 4899999999999999999999999855444432221
Q ss_pred HHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 698 QAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 698 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
.. ..-+.|... ....+.++|.+|+..||..++++||.+.+|+..++....
T Consensus 606 Gr--------G~l~pd~s~---~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 606 GR--------GYLMPDLSK---IRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred cc--------cccCccchh---hhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 11 111222211 122344567788889999999999999999998875543
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-42 Score=369.04 Aligned_cols=269 Identities=20% Similarity=0.357 Sum_probs=211.2
Q ss_pred cCHHHHHHHhcCCCccCccCCCCCceeEEEEecC--C---cEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCccee
Q 003926 467 FSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKN--G---TFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSA 538 (786)
Q Consensus 467 ~~~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~~--g---~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l 538 (786)
+..+.++-..++....+.||+|+||.||+|+++. + ..||||..+... .....+|++|+++|++++|||||++
T Consensus 147 I~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~ 226 (474)
T KOG0194|consen 147 IPRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRF 226 (474)
T ss_pred ccccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEE
Confidence 3444555566666777999999999999999653 2 238999988533 2345789999999999999999999
Q ss_pred eeeeeeccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCcee
Q 003926 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDIL 618 (786)
Q Consensus 539 ~g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NIL 618 (786)
+|++.. ...+++|||+|.||+|.++|.+.. ..++..+++.++.++|+||+|||.. .+|||||.++|+|
T Consensus 227 yGVa~~-------~~Pl~ivmEl~~gGsL~~~L~k~~--~~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL 294 (474)
T KOG0194|consen 227 YGVAVL-------EEPLMLVMELCNGGSLDDYLKKNK--KSLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCL 294 (474)
T ss_pred EEEEcC-------CCccEEEEEecCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHhe
Confidence 999875 467899999999999999998743 2699999999999999999999998 9999999999999
Q ss_pred ecCCCcccccCCCcccccccccccc-cccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHH
Q 003926 619 LDQNLVAKISSYNLPLLAENAEKVG-HVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQ 696 (786)
Q Consensus 619 ld~~~~~kl~DfGl~~~~~~~~~~~-~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~ 696 (786)
++.+..+||+|||+++......... ...-...|+|||.+..+.|+.|+|||||||++||+++ |..|+.+.....+..+
T Consensus 295 ~~~~~~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~k 374 (474)
T KOG0194|consen 295 YSKKGVVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAK 374 (474)
T ss_pred ecCCCeEEeCccccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHH
Confidence 9999999999999986554221111 1123357899999999999999999999999999999 8889887766555544
Q ss_pred HHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhhh
Q 003926 697 LQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQD 761 (786)
Q Consensus 697 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~~ 761 (786)
+... . .+ +. .+...+..+..++.+||..+|++||+|.+|.+.+........
T Consensus 375 I~~~---~---~r-~~-------~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 375 IVKN---G---YR-MP-------IPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred HHhc---C---cc-CC-------CCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence 4211 0 00 00 111222345566669999999999999999999986655443
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-42 Score=346.43 Aligned_cols=257 Identities=18% Similarity=0.331 Sum_probs=208.8
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC---ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH---STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~---~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
.++|+..++||+|+||+||.++.+ +++.+|+|++++.... ..+...+|..+|.+++||.||+++-.+..
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt------- 96 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQT------- 96 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEeccc-------
Confidence 457889999999999999999854 6999999999877542 34568899999999999999999865543
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
.+.+|||+||+.||.|..+|.+. ..++.....-++.+|+.||.|||+. +||||||||+|||||++|+++|+|||
T Consensus 97 ~~kLylVld~~~GGeLf~hL~~e---g~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFg 170 (357)
T KOG0598|consen 97 EEKLYLVLDYLNGGELFYHLQRE---GRFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFG 170 (357)
T ss_pred CCeEEEEEeccCCccHHHHHHhc---CCcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccc
Confidence 57899999999999999999853 3588888888899999999999998 99999999999999999999999999
Q ss_pred cccccc-cccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 632 LPLLAE-NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 632 l~~~~~-~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
+++... ......+.+||..|||||++.+..|+..+|+||+||++|||++|.+||...+.....+.+. ....
T Consensus 171 L~k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~---~~k~----- 242 (357)
T KOG0598|consen 171 LCKEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKIL---KGKL----- 242 (357)
T ss_pred cchhcccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHh---cCcC-----
Confidence 997543 3345556799999999999999999999999999999999999999998765433322221 1110
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCC----CHHHHHHHHHHHHHhh
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERP----SVEDVLWNLQFAAQVQ 760 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP----t~~evl~~l~~~~~~~ 760 (786)
..-|. . ...+..+++.+.++.||++|- .+.+|-+|++|.....
T Consensus 243 ~~~p~----~---ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW 289 (357)
T KOG0598|consen 243 PLPPG----Y---LSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINW 289 (357)
T ss_pred CCCCc----c---CCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCH
Confidence 00111 1 113455777799999999994 6888999998886533
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-41 Score=325.00 Aligned_cols=268 Identities=20% Similarity=0.341 Sum_probs=215.0
Q ss_pred CCCccCccCCCCCceeEEEE-ecCCcEEEEEEecccCCCC--hHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 478 NFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHS--TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~--~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
.|...+.+|+|.||.||+|+ .++|+.||||+++.....+ ....++|++.|+.++|+|||.+++++-. .+.
T Consensus 3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~-------~~~ 75 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPH-------KSN 75 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccC-------CCc
Confidence 45667899999999999999 5689999999998765432 4568999999999999999999998754 456
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
+-||+|||+. ||+..|++. ...++..+...++.++.+|++|||++ .|+||||||.|+|++.++.+||+|||+++
T Consensus 76 l~lVfEfm~t-dLe~vIkd~--~i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr 149 (318)
T KOG0659|consen 76 LSLVFEFMPT-DLEVVIKDK--NIILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLAR 149 (318)
T ss_pred eEEEEEeccc-cHHHHhccc--ccccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchh
Confidence 8999999987 999999864 45789999999999999999999998 99999999999999999999999999998
Q ss_pred cccccc-ccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCc-hhHHHHHHHHHHHHhcccccccc
Q 003926 635 LAENAE-KVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRK-EVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 635 ~~~~~~-~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
...... .......+..|.|||.+.+ ..|+..+||||.|||+.||+-|.|.+.+. +.+++..+........+..+.++
T Consensus 150 ~f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~ 229 (318)
T KOG0659|consen 150 FFGSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEM 229 (318)
T ss_pred ccCCCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccc
Confidence 764332 2333356788999998654 56999999999999999999999988764 55666666555544444444433
Q ss_pred c---c-------cc-ccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 712 V---D-------PA-VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 712 ~---d-------~~-~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
. | |. ........+..+.++++..++..||.+|.|+.|+++|.+|...
T Consensus 230 ~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~ 287 (318)
T KOG0659|consen 230 TSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSL 287 (318)
T ss_pred cccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcC
Confidence 1 1 11 1111233445567899999999999999999999999998863
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-41 Score=352.07 Aligned_cols=268 Identities=22% Similarity=0.361 Sum_probs=211.0
Q ss_pred cCCCccCccCCCCCceeEEEE-ecCCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
+.|+..+.||+|.||.||||+ ..+|..||+|++..... ....-..+||.+|++++|||||+|.|...+. -..
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~-----~~~ 191 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSK-----LSG 191 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEec-----CCc
Confidence 345566889999999999998 67899999999986653 2345567999999999999999999988762 135
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
.+|||+|||+. ||.-++... ...++..+...++.|++.||+|+|.+ +|+|||||.+|||||.+|.+||+|||||
T Consensus 192 siYlVFeYMdh-DL~GLl~~p--~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLA 265 (560)
T KOG0600|consen 192 SIYLVFEYMDH-DLSGLLSSP--GVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLA 265 (560)
T ss_pred eEEEEEecccc-hhhhhhcCC--CcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccce
Confidence 68999999998 999888753 34699999999999999999999998 9999999999999999999999999999
Q ss_pred ccccccc--ccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCc-hhHHHHHHHHHHHHhcccccc
Q 003926 634 LLAENAE--KVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRK-EVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 634 ~~~~~~~--~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~-~~~~~~~~~~~~~~~~~~~~~ 709 (786)
++..... .++...-|..|.+||.+.+. .|+.++|+||.||||.||++|+|.+.+. +.+++..+........+..+.
T Consensus 266 r~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~ 345 (560)
T KOG0600|consen 266 RFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWP 345 (560)
T ss_pred eeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccc
Confidence 8665433 34455567889999987664 6999999999999999999999998764 555665555544444333333
Q ss_pred --ccc-----ccccc-ccCcHHH----HHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 710 --SMV-----DPAVN-KACLDES----LKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 710 --~~~-----d~~~~-~~~~~~~----~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
.+. .|... ..+..|. ....++++..+|..||++|.|+.+++.+-+|
T Consensus 346 ~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF 403 (560)
T KOG0600|consen 346 VSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYF 403 (560)
T ss_pred cccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCccc
Confidence 111 11111 1112222 3456788889999999999999999987776
|
|
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-41 Score=388.27 Aligned_cols=253 Identities=23% Similarity=0.440 Sum_probs=201.7
Q ss_pred CCccCccCCCCCceeEEEEecC--Cc----EEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 479 FDTSAFMGEGSQGQMYRGRLKN--GT----FVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~~--g~----~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
....+.||+|.||.||+|++.+ |. .||||.++.... +...+|++|+.+|++++|||||+++|+|.+
T Consensus 694 v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~------- 766 (1025)
T KOG1095|consen 694 VTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD------- 766 (1025)
T ss_pred eEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecC-------
Confidence 3456889999999999999653 43 499999876533 446789999999999999999999999986
Q ss_pred CceEEEEEecCCCCChhHHhhcCCC----CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccc
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHA----HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKI 627 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~----~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl 627 (786)
....+|++|||++|||..+|++.+. ...++....+.++.|||+|+.||++. ++|||||.++|+||++...+||
T Consensus 767 ~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKI 843 (1025)
T KOG1095|consen 767 SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKI 843 (1025)
T ss_pred CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEE
Confidence 3457999999999999999987532 24588999999999999999999998 9999999999999999999999
Q ss_pred cCCCcccccccccccc---cccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHh
Q 003926 628 SSYNLPLLAENAEKVG---HVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTA 703 (786)
Q Consensus 628 ~DfGl~~~~~~~~~~~---~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~ 703 (786)
+|||+|+.....+.+. ...-...|||||.+.++.||.|+|||||||+|||++| |..|+......++...+.. .
T Consensus 844 aDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~---g 920 (1025)
T KOG1095|consen 844 ADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLE---G 920 (1025)
T ss_pred cccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHh---C
Confidence 9999998443322221 1122357999999999999999999999999999999 8899876554333321111 0
Q ss_pred ccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 704 DESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 704 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
. .+++ +..|++ .+.+++..||+.+|++||++..+++++...
T Consensus 921 g------RL~~--P~~CP~----~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i 961 (1025)
T KOG1095|consen 921 G------RLDP--PSYCPE----KLYQLMLQCWKHDPEDRPSFRTIVEQDPAI 961 (1025)
T ss_pred C------ccCC--CCCCCh----HHHHHHHHHccCChhhCccHHHHHhhhhhh
Confidence 0 1111 233554 566888899999999999999999977533
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-41 Score=353.75 Aligned_cols=258 Identities=20% Similarity=0.312 Sum_probs=210.7
Q ss_pred HHhcCCCccCccCCCCCceeEEEE-ecCCcEEEEEEecccCC---CChHHHHHHHHHHhcC-CCCCcceeeeeeeecccc
Q 003926 474 EATNNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKC---HSTRNFMHHIELISKL-RHRHLVSALGHCFECYFD 548 (786)
Q Consensus 474 ~~~~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~ 548 (786)
+..+||..++.||+|+|++||+|+ .+++..+|||++.+... ...+-...|-.+|.+| .||.||+|+-.+.+
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD---- 145 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQD---- 145 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeec----
Confidence 345688899999999999999999 45799999999976532 1123356788889999 89999999866543
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCccccc
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKIS 628 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~ 628 (786)
...+|+|+||+++|+|.++|++. ..++......+|.+|+.||+|||++ +||||||||+|||+|++|++||+
T Consensus 146 ---~~sLYFvLe~A~nGdll~~i~K~---Gsfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikIT 216 (604)
T KOG0592|consen 146 ---EESLYFVLEYAPNGDLLDLIKKY---GSFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKIT 216 (604)
T ss_pred ---ccceEEEEEecCCCcHHHHHHHh---CcchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEe
Confidence 45699999999999999999864 4688888889999999999999998 99999999999999999999999
Q ss_pred CCCcccccccccc------------c--ccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHH
Q 003926 629 SYNLPLLAENAEK------------V--GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLK 694 (786)
Q Consensus 629 DfGl~~~~~~~~~------------~--~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~ 694 (786)
|||-|+....... . ....||..|.+||.+..+..+..+|+|+|||+||.|+.|+|||.+.+...+.
T Consensus 217 DFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliF 296 (604)
T KOG0592|consen 217 DFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIF 296 (604)
T ss_pred eccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHH
Confidence 9999976643211 1 3367889999999999999999999999999999999999999987766555
Q ss_pred HHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 003926 695 NQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760 (786)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~ 760 (786)
+.+...-... +...+ ..+.+|+.+.|..||.+|+|..||-+|++|.....
T Consensus 297 qkI~~l~y~f------------p~~fp----~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vdw 346 (604)
T KOG0592|consen 297 QKIQALDYEF------------PEGFP----EDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVDW 346 (604)
T ss_pred HHHHHhcccC------------CCCCC----HHHHHHHHHHHccCccccccHHHHhhCcccccCCh
Confidence 4443322211 11111 34567888999999999999999999999987533
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-41 Score=348.34 Aligned_cols=259 Identities=21% Similarity=0.383 Sum_probs=201.7
Q ss_pred CCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEE
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~ 556 (786)
++...+.||+|+||.||++... +|...|||.+........+...+|+++|++++|||||+++|..... . ...++
T Consensus 18 ~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~----~-~~~~~ 92 (313)
T KOG0198|consen 18 NWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSR----E-NDEYN 92 (313)
T ss_pred hhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccc----c-CeeeE
Confidence 4556789999999999999965 5999999998766433356789999999999999999999964321 0 13689
Q ss_pred EEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC-CCcccccCCCcccc
Q 003926 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ-NLVAKISSYNLPLL 635 (786)
Q Consensus 557 LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~-~~~~kl~DfGl~~~ 635 (786)
+.|||+++|+|.+++.+... .++......++.||++||.|||+. +|||||||++|||++. ++.+||+|||+++.
T Consensus 93 i~mEy~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~ 167 (313)
T KOG0198|consen 93 IFMEYAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKK 167 (313)
T ss_pred eeeeccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCccccc
Confidence 99999999999999986432 699999999999999999999987 9999999999999999 79999999999865
Q ss_pred ccc----ccccccccccccccCccccccCC-CCcccceeehhHHHHHHHhCCCCCCCc-hhHHHHHHHHHHHHhcccccc
Q 003926 636 AEN----AEKVGHVIPYSGSIDPTNSARGK-LEEKIDIYDFGLILLEIIVGRPLKSRK-EVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 636 ~~~----~~~~~~~~~~~~~~aPe~~~~~~-~t~ksDVwSfGvvl~ElltG~~p~~~~-~~~~~~~~~~~~~~~~~~~~~ 709 (786)
... ........|++.|||||++..+. ...++||||+||++.||+||++||... +... .........
T Consensus 168 ~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~------~~~~ig~~~-- 239 (313)
T KOG0198|consen 168 LESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAE------ALLLIGRED-- 239 (313)
T ss_pred cccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHH------HHHHHhccC--
Confidence 542 12233467889999999988543 334999999999999999999998752 1111 111111000
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~ 760 (786)
.-|.++ .....+..+++.+|++.||++|||+.|++.|++......
T Consensus 240 --~~P~ip----~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~ 284 (313)
T KOG0198|consen 240 --SLPEIP----DSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI 284 (313)
T ss_pred --CCCCCC----cccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence 112222 223345567778999999999999999999999766443
|
|
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-40 Score=348.44 Aligned_cols=259 Identities=21% Similarity=0.368 Sum_probs=205.1
Q ss_pred cCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
....+.+.||+|.||.|..+....+..||||.++..... .+.+|.+|+++|.+++|||||.++|+|.. .+.+
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~-------DePi 610 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQ-------DDPL 610 (807)
T ss_pred hheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeec-------CCch
Confidence 345567899999999999999988899999999977654 45899999999999999999999999986 4568
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
++|+|||++|+|.+++.+.... .+.-...++|+.|||.||+||.+. .+||||+.++|+|+|+++++||+|||+++.
T Consensus 611 cmI~EYmEnGDLnqFl~aheap-t~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~ 686 (807)
T KOG1094|consen 611 CMITEYMENGDLNQFLSAHELP-TAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRN 686 (807)
T ss_pred HHHHHHHhcCcHHHHHHhccCc-ccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccccc
Confidence 9999999999999999875322 244556678999999999999997 999999999999999999999999999974
Q ss_pred ccccccc---ccccccccccCccccccCCCCcccceeehhHHHHHHHh--CCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 636 AENAEKV---GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV--GRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 636 ~~~~~~~---~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt--G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
.-....+ +...-...|||+|.+.-+++|+++|||+|||++||+++ ...|+.....+.+.+......... .+.
T Consensus 687 lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~---~~~ 763 (807)
T KOG1094|consen 687 LYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQ---GRQ 763 (807)
T ss_pred cccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCC---Ccc
Confidence 4332222 12233467999999999999999999999999999876 667887655554444433332221 111
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
.+ +..+..|+. .+.+++.+||..|-++||+++++..+++
T Consensus 764 ~~-l~~P~~cp~----~lyelml~Cw~~es~~RPsFe~lh~~lq 802 (807)
T KOG1094|consen 764 VV-LSRPPACPQ----GLYELMLRCWRRESEQRPSFEQLHLFLQ 802 (807)
T ss_pred ee-ccCCCcCcH----HHHHHHHHHhchhhhcCCCHHHHHHHHH
Confidence 11 111233444 5668888999999999999999998875
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=349.31 Aligned_cols=254 Identities=19% Similarity=0.359 Sum_probs=212.0
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
++|...+.||+|+||.||||+.+ +.+.||+|.+.+.... ..+...+|++++++++|||||.+++.+.. ..
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt-------~~ 74 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFET-------SA 74 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcc-------cc
Confidence 45677789999999999999965 6899999999876543 34678999999999999999999998764 56
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
++|+|.|||.+ +|..+|... ..++..+...|+.+.+.||.|||++ +|+|||+||.|||++.++++|++|||++
T Consensus 75 ~~~vVte~a~g-~L~~il~~d---~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~A 147 (808)
T KOG0597|consen 75 HLWVVTEYAVG-DLFTILEQD---GKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLA 147 (808)
T ss_pred eEEEEehhhhh-hHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhh
Confidence 79999999987 999999864 3699999999999999999999998 9999999999999999999999999999
Q ss_pred cccccccc-cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 634 LLAENAEK-VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 634 ~~~~~~~~-~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
+.+..... .....|++.|||||....+.|+..+|.||+||++|||++|+|||.......+.+.+ ..+
T Consensus 148 r~m~~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I---~~d--------- 215 (808)
T KOG0597|consen 148 RAMSTNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSI---LKD--------- 215 (808)
T ss_pred hhcccCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHH---hcC---------
Confidence 87754433 34457899999999999999999999999999999999999999866554433222 111
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~ 760 (786)
|- .++......+..+....+.+||.+|-|..+++.|++.+..+.
T Consensus 216 -~v---~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~~~ 259 (808)
T KOG0597|consen 216 -PV---KPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGKIN 259 (808)
T ss_pred -CC---CCcccccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhhhh
Confidence 11 122344556777888999999999999999999998776543
|
|
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-40 Score=346.62 Aligned_cols=259 Identities=19% Similarity=0.258 Sum_probs=203.9
Q ss_pred CCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 479 FDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
|+..+.||+|+||.||+|.. .+|+.||||.+..... .....+.+|++++++++|+||+++++++.+ .+.
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~-------~~~ 74 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYET-------KDA 74 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEcc-------CCe
Confidence 66778999999999999985 5799999999875432 223468899999999999999999988764 456
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++||||+++|+|.+++.... ...+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||++.
T Consensus 75 ~~lv~e~~~~g~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~ 150 (285)
T cd05631 75 LCLVLTIMNGGDLKFHIYNMG-NPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAV 150 (285)
T ss_pred EEEEEEecCCCcHHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcE
Confidence 899999999999998886432 23589999999999999999999997 99999999999999999999999999987
Q ss_pred ccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccc
Q 003926 635 LAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDP 714 (786)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 714 (786)
............++..|+|||.+....++.++|||||||++|||++|+.||...........+........ .
T Consensus 151 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~--------~ 222 (285)
T cd05631 151 QIPEGETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQ--------E 222 (285)
T ss_pred EcCCCCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhccc--------c
Confidence 65433333344577889999999888999999999999999999999999975432211111111111100 0
Q ss_pred cccccCcHHHHHHHHHHHHHhccCCCCCCCC-----HHHHHHHHHHHHHhh
Q 003926 715 AVNKACLDESLKTMMEVCVRCLLKNPAERPS-----VEDVLWNLQFAAQVQ 760 (786)
Q Consensus 715 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt-----~~evl~~l~~~~~~~ 760 (786)
.. +......+.+++.+||+.||++||+ ++|+++|+||.....
T Consensus 223 ~~----~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~ 269 (285)
T cd05631 223 EY----SEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINF 269 (285)
T ss_pred cC----CccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCH
Confidence 01 1112235667888999999999997 899999999876443
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=315.54 Aligned_cols=254 Identities=22% Similarity=0.350 Sum_probs=212.2
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
.++|+.++.||+|.||.||.|+.+ ++-.||+|++.+... +..+++.+|+++-+.++||||++++|++.+
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd------- 93 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHD------- 93 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheec-------
Confidence 457889999999999999999954 688999999976542 345789999999999999999999999876
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
....||++||.++|++...|.++. ...++......+..|+|.|+.|+|.. ++|||||||+|+|++.++..|++|||
T Consensus 94 ~~riyLilEya~~gel~k~L~~~~-~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfG 169 (281)
T KOG0580|consen 94 SKRIYLILEYAPRGELYKDLQEGR-MKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFG 169 (281)
T ss_pred cceeEEEEEecCCchHHHHHHhcc-cccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCC
Confidence 456899999999999999998543 34577777888999999999999997 99999999999999999999999999
Q ss_pred cccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 632 LPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 632 l~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
.+.... ..+..+.+||.-|.+||......++.++|+|++||+.||++.|.+||.....+.....+... +.
T Consensus 170 wsV~~p-~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~---------~~ 239 (281)
T KOG0580|consen 170 WSVHAP-SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKV---------DL 239 (281)
T ss_pred ceeecC-CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHc---------cc
Confidence 987665 33445678899999999999989999999999999999999999999876544443333221 12
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.+|. .....+.+++.+|+.++|.+|.+..||+.|+|..+
T Consensus 240 ~~p~-------~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a 278 (281)
T KOG0580|consen 240 KFPS-------TISGGAADLISRLLVKNPIERLALTEVMDHPWIVA 278 (281)
T ss_pred cCCc-------ccChhHHHHHHHHhccCccccccHHHHhhhHHHHh
Confidence 2221 12235668889999999999999999999999765
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=350.71 Aligned_cols=255 Identities=20% Similarity=0.309 Sum_probs=209.3
Q ss_pred HhcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccC----C-CChHHHHHHHHHHhcCC-CCCcceeeeeeeeccc
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKK----C-HSTRNFMHHIELISKLR-HRHLVSALGHCFECYF 547 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~----~-~~~~~f~~E~~~l~~l~-H~NIv~l~g~~~~~~~ 547 (786)
....|...+.||+|+||+||.|+. .+|..||||.++... . ...+...+|+.++++++ ||||++++.++..
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t--- 91 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFAT--- 91 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEec---
Confidence 345788899999999999999985 578999999776642 2 22345668999999999 9999999998764
Q ss_pred cCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCC-Cccc
Q 003926 548 DDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN-LVAK 626 (786)
Q Consensus 548 ~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~-~~~k 626 (786)
....|+||||+.+|+|.+++.+. ..+......+++.|++.|++|+|+. +|+||||||+|||+|.+ +++|
T Consensus 92 ----~~~~~ivmEy~~gGdL~~~i~~~---g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~K 161 (370)
T KOG0583|consen 92 ----PTKIYIVMEYCSGGDLFDYIVNK---GRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLK 161 (370)
T ss_pred ----CCeEEEEEEecCCccHHHHHHHc---CCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEE
Confidence 45699999999999999999872 3578888899999999999999998 99999999999999999 9999
Q ss_pred ccCCCccccc-ccccccccccccccccCccccccCC-CC-cccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHh
Q 003926 627 ISSYNLPLLA-ENAEKVGHVIPYSGSIDPTNSARGK-LE-EKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTA 703 (786)
Q Consensus 627 l~DfGl~~~~-~~~~~~~~~~~~~~~~aPe~~~~~~-~t-~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~ 703 (786)
|+|||++... .........+|++.|+|||.+.+.. |+ .++||||+||+||.|++|+.||++.+...+...+. .
T Consensus 162 l~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~----~ 237 (370)
T KOG0583|consen 162 LSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIR----K 237 (370)
T ss_pred EeccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHh----c
Confidence 9999999877 3555667788999999999998876 76 78999999999999999999998755433332211 1
Q ss_pred ccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 704 DESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 704 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
..-..+..++ ..++.+++.+|+..||.+|+|+.||+.|.|+..
T Consensus 238 ~~~~~p~~~~-----------S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 238 GEFKIPSYLL-----------SPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred CCccCCCCcC-----------CHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 1111111110 345667888999999999999999999999987
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-40 Score=325.67 Aligned_cols=272 Identities=21% Similarity=0.323 Sum_probs=214.6
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCC--hHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHS--TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~--~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.++|+..+.|++|+||.||||+. ++++.||+|+++.++... .-.-++||.+|.+++|||||.+..+... .+-
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG-----~~~ 149 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVG-----SNM 149 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEec-----ccc
Confidence 45566789999999999999995 479999999999775322 2346899999999999999999887764 234
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+.+|+|||||+. ||..+++.- .+++...+...+..|+.+|+.|||.+ .|+|||||++|+|+...|.+||+|||+
T Consensus 150 d~iy~VMe~~Eh-DLksl~d~m--~q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGL 223 (419)
T KOG0663|consen 150 DKIYIVMEYVEH-DLKSLMETM--KQPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGL 223 (419)
T ss_pred ceeeeeHHHHHh-hHHHHHHhc--cCCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccch
Confidence 669999999998 999999864 35788899999999999999999998 999999999999999999999999999
Q ss_pred ccccccc-cccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCc-hhHHHHHHHHHHHHhcccccc
Q 003926 633 PLLAENA-EKVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRK-EVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 633 ~~~~~~~-~~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~-~~~~~~~~~~~~~~~~~~~~~ 709 (786)
|+..... ...+....|..|.|||.+.+. .|++.+|+||+|||+.||++++|.|.+. +.+++..+.+...+..+..+.
T Consensus 224 AR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwp 303 (419)
T KOG0663|consen 224 AREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWP 303 (419)
T ss_pred hhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCC
Confidence 9877544 234455567789999987664 5999999999999999999999998764 456666666555444443333
Q ss_pred cccccc-c-----cc--------cCcHH-HHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 710 SMVDPA-V-----NK--------ACLDE-SLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 710 ~~~d~~-~-----~~--------~~~~~-~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
...... . .. .+... ....-.++....+..||++|-|+.|.++|-||.+.
T Consensus 304 g~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~ 367 (419)
T KOG0663|consen 304 GYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRET 367 (419)
T ss_pred CccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccC
Confidence 221111 0 00 00000 22445677888999999999999999999999874
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-39 Score=339.41 Aligned_cols=262 Identities=19% Similarity=0.312 Sum_probs=202.5
Q ss_pred cccCHHHHHHHhcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCC---hHHHHHHHHHHhcCCCCCcceeeee
Q 003926 465 RTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHS---TRNFMHHIELISKLRHRHLVSALGH 541 (786)
Q Consensus 465 ~~~~~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~---~~~f~~E~~~l~~l~H~NIv~l~g~ 541 (786)
+.++.++++ ......||+|++|.||+|.+ +|+.||||+++...... .+.|.+|+++|++++|||||+++|+
T Consensus 13 ~~i~~~~i~-----~~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~ 86 (283)
T PHA02988 13 KCIESDDID-----KYTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGF 86 (283)
T ss_pred eecCHHHcC-----CCCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeee
Confidence 445566662 23346899999999999998 58899999998654333 3678899999999999999999999
Q ss_pred eeeccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC
Q 003926 542 CFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ 621 (786)
Q Consensus 542 ~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~ 621 (786)
+.+.. ......++||||+++|+|.+++.+. ..++|...+.++.++++||.|||+. .+++||||||+||++++
T Consensus 87 ~~~~~---~~~~~~~lv~Ey~~~g~L~~~l~~~---~~~~~~~~~~i~~~i~~~l~~lH~~--~~~~Hrdlkp~nill~~ 158 (283)
T PHA02988 87 IIDIV---DDLPRLSLILEYCTRGYLREVLDKE---KDLSFKTKLDMAIDCCKGLYNLYKY--TNKPYKNLTSVSFLVTE 158 (283)
T ss_pred EEecc---cCCCceEEEEEeCCCCcHHHHHhhC---CCCChhHHHHHHHHHHHHHHHHHhc--CCCCCCcCChhhEEECC
Confidence 86411 1234679999999999999999763 3689999999999999999999973 26789999999999999
Q ss_pred CCcccccCCCcccccccccccccccccccccCcccccc--CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHH
Q 003926 622 NLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSAR--GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQA 699 (786)
Q Consensus 622 ~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~--~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~ 699 (786)
++.+||+|||+++...... ....++..|+|||.... ..++.++|||||||++|||++|+.||.......+...+
T Consensus 159 ~~~~kl~dfg~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i-- 234 (283)
T PHA02988 159 NYKLKIICHGLEKILSSPP--FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLI-- 234 (283)
T ss_pred CCcEEEcccchHhhhcccc--ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHH--
Confidence 9999999999986543221 12345678999999865 67999999999999999999999999865543332221
Q ss_pred HHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 700 VVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 700 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
.... . .+..+..+ ...+.+++.+||+.||++|||+.||++.+..-
T Consensus 235 -~~~~---~----~~~~~~~~----~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~ 279 (283)
T PHA02988 235 -INKN---N----SLKLPLDC----PLEIKCIVEACTSHDSIKRPNIKEILYNLSLY 279 (283)
T ss_pred -HhcC---C----CCCCCCcC----cHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence 1111 0 01111122 23567888899999999999999999988643
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=352.95 Aligned_cols=258 Identities=19% Similarity=0.340 Sum_probs=198.2
Q ss_pred HhcCCCccCccCCCCCceeEEEEe------cCCcEEEEEEecccCC-CChHHHHHHHHHHhcC-CCCCcceeeeeeeecc
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRL------KNGTFVAIRCLKMKKC-HSTRNFMHHIELISKL-RHRHLVSALGHCFECY 546 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~ 546 (786)
+.++|...+.||+|+||.||+|+. .++..||||+++.... ...+.+.+|+.+++++ +|||||+++|+|...
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~- 83 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKP- 83 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCC-
Confidence 345688889999999999999974 2357899999875432 2245799999999999 899999999988641
Q ss_pred ccCCCCceEEEEEecCCCCChhHHhhcCCC--------------------------------------------------
Q 003926 547 FDDSSVSRIFLIFEYVPNGTLRSWISEGHA-------------------------------------------------- 576 (786)
Q Consensus 547 ~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~-------------------------------------------------- 576 (786)
....++||||+++|+|.+++.....
T Consensus 84 -----~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T cd05102 84 -----NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTN 158 (338)
T ss_pred -----CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccc
Confidence 3458999999999999999874311
Q ss_pred ---------CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccccccc---ccc
Q 003926 577 ---------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEK---VGH 644 (786)
Q Consensus 577 ---------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~~---~~~ 644 (786)
...+++...+.++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++....... ...
T Consensus 159 ~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 235 (338)
T cd05102 159 PPQETDDLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGS 235 (338)
T ss_pred cchhccccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccC
Confidence 13478889999999999999999997 999999999999999999999999999865422111 112
Q ss_pred ccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHH-HHHHHHHHHHhccccccccccccccccCcH
Q 003926 645 VIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDL-LKNQLQAVVTADESARRSMVDPAVNKACLD 722 (786)
Q Consensus 645 ~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 722 (786)
..++..|+|||.+....++.++|||||||++|||++ |++||....... .... ..... .+..+.
T Consensus 236 ~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~----~~~~~-------~~~~~~---- 300 (338)
T cd05102 236 ARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQR----LKDGT-------RMRAPE---- 300 (338)
T ss_pred CCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHH----HhcCC-------CCCCCC----
Confidence 233457999999988889999999999999999997 999987643221 1111 11110 011111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 723 ESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 723 ~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
.....+.+++.+||+.||++|||+.||++.++..
T Consensus 301 ~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~ 334 (338)
T cd05102 301 NATPEIYRIMLACWQGDPKERPTFSALVEILGDL 334 (338)
T ss_pred CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 1223567888999999999999999999988743
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-40 Score=346.16 Aligned_cols=258 Identities=19% Similarity=0.343 Sum_probs=210.6
Q ss_pred HHHHHHhcCCCccCccCCCCCceeEEEEecC-CcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeecccc
Q 003926 470 EELEEATNNFDTSAFMGEGSQGQMYRGRLKN-GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFD 548 (786)
Q Consensus 470 ~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~ 548 (786)
++++-...+..-...||-|.||.||.|+|+. ...||||.++.+. ...++|++|+.+|+.++|||+|+|+|+|..
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt-MeveEFLkEAAvMKeikHpNLVqLLGVCT~---- 334 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTH---- 334 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc-hhHHHHHHHHHHHHhhcCccHHHHhhhhcc----
Confidence 4444444555667899999999999999874 7889999998654 457899999999999999999999999975
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCccccc
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKIS 628 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~ 628 (786)
...+|||.|||.+|+|.+||++... ..++-...+.+|.||+.||.||... .+|||||.++|+|+.++-.+||+
T Consensus 335 ---EpPFYIiTEfM~yGNLLdYLRecnr-~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvA 407 (1157)
T KOG4278|consen 335 ---EPPFYIITEFMCYGNLLDYLRECNR-SEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVA 407 (1157)
T ss_pred ---CCCeEEEEecccCccHHHHHHHhch-hhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEee
Confidence 4568999999999999999997643 3567777889999999999999987 99999999999999999999999
Q ss_pred CCCcccccccccccccc--cccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcc
Q 003926 629 SYNLPLLAENAEKVGHV--IPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADE 705 (786)
Q Consensus 629 DfGl~~~~~~~~~~~~~--~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 705 (786)
|||+++++.......+. .-...|.|||.+....++.|+|||+|||+|||+.| |-.|+.+.+...+...+...+..
T Consensus 408 DFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyRM-- 485 (1157)
T KOG4278|consen 408 DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYRM-- 485 (1157)
T ss_pred ccchhhhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccccc--
Confidence 99999888654332221 12346889999999999999999999999999998 88888877665555444332211
Q ss_pred ccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 706 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
..++.++..+.+++..||+.+|++||+++|+-+.++
T Consensus 486 -------------~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafE 521 (1157)
T KOG4278|consen 486 -------------DGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFE 521 (1157)
T ss_pred -------------cCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHH
Confidence 112233446778889999999999999999988776
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=348.25 Aligned_cols=251 Identities=17% Similarity=0.274 Sum_probs=213.3
Q ss_pred CCCccCccCCCCCceeEEEE-ecCCcEEEEEEecccCCC---ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 478 NFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCH---STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~---~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
-|+.++.||+|+-|.|..|+ ..+|+.+|||++.+.... ....+.+|+-+|+-+.||||+++++++.. ..
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~-------~~ 85 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWEN-------KQ 85 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeecc-------Cc
Confidence 35668899999999999998 568999999999766321 23568899999999999999999998865 56
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
++|+|.||+++|.|.+++-.. .++...+..+++.||+.|+.|+|.. +|+|||+||+|+|||....+||+|||+|
T Consensus 86 ~lylvlEyv~gGELFdylv~k---G~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMA 159 (786)
T KOG0588|consen 86 HLYLVLEYVPGGELFDYLVRK---GPLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMA 159 (786)
T ss_pred eEEEEEEecCCchhHHHHHhh---CCCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeecccee
Confidence 799999999999999999763 4688999999999999999999997 9999999999999999999999999999
Q ss_pred cccccccccccccccccccCccccccCCCC-cccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 634 LLAENAEKVGHVIPYSGSIDPTNSARGKLE-EKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t-~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
.+...+.-..+.+|.+.|.+||++.+..|+ .++||||+|||||.|+||+.||++.+...+...++....+.
T Consensus 160 sLe~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~M-------- 231 (786)
T KOG0588|consen 160 SLEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEM-------- 231 (786)
T ss_pred ecccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccC--------
Confidence 777666666778999999999999998885 69999999999999999999999877666555554432221
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
+.....++-+++.+++..||++|-|++||++|+|...
T Consensus 232 --------Ps~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g 268 (786)
T KOG0588|consen 232 --------PSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSG 268 (786)
T ss_pred --------CCcCCHHHHHHHHHHhccCccccccHHHHhhCchhhc
Confidence 1222335567888999999999999999999999765
|
|
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-39 Score=347.09 Aligned_cols=270 Identities=17% Similarity=0.281 Sum_probs=206.2
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
.++|+..+.||+|+||.||+++.+ +|..||+|.+..... ...+.|.+|++++++++||||+++++++.. .+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------~~ 76 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-------DG 76 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE-------CC
Confidence 357888999999999999999965 688999999875432 224579999999999999999999998865 45
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++||||+++|+|.+++... ..+++.....++.|++.||.|||+. .+|+||||||+||+++.++.+||+|||++
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~--~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 151 (331)
T cd06649 77 EISICMEHMDGGSLDQVLKEA---KRIPEEILGKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGVS 151 (331)
T ss_pred EEEEEeecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHhhc--CCEEcCCCChhhEEEcCCCcEEEccCccc
Confidence 689999999999999999753 3588999999999999999999974 26999999999999999999999999998
Q ss_pred cccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccc---
Q 003926 634 LLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRS--- 710 (786)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--- 710 (786)
....... .....++..|+|||.+....++.++|||||||++|||+||+.||...+...+...+.............
T Consensus 152 ~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (331)
T cd06649 152 GQLIDSM-ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSIS 230 (331)
T ss_pred ccccccc-cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccC
Confidence 6443221 223356778999999988889999999999999999999999997654433322221110000000000
Q ss_pred -----------------------------cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 711 -----------------------------MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 711 -----------------------------~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
+...............++.+++.+||+.||++|||+.|+++|+|+...
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 307 (331)
T cd06649 231 PRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRS 307 (331)
T ss_pred cccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhc
Confidence 000000000001123467789999999999999999999999998764
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-40 Score=337.79 Aligned_cols=252 Identities=19% Similarity=0.333 Sum_probs=204.8
Q ss_pred CCCccCccCCCCCceeEEEE-ecCCcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 478 NFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
.|...+.||+|+||.||||. .++++.||+|++...... ..++..+|+.++++++++||.+++|.+.. +..+
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~-------g~~L 86 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLK-------GTKL 86 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheee-------cccH
Confidence 35556889999999999998 457999999999876544 35778999999999999999999998875 4568
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
|++||||.+|++.+.+.... .++......|..++..|+.|||.. +.+|||||+.|||+..++.+|++|||++..
T Consensus 87 wiiMey~~gGsv~~lL~~~~---~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~q 160 (467)
T KOG0201|consen 87 WIIMEYCGGGSVLDLLKSGN---ILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQ 160 (467)
T ss_pred HHHHHHhcCcchhhhhccCC---CCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeee
Confidence 99999999999999997532 346666777888999999999998 999999999999999999999999999865
Q ss_pred ccccc-ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccc
Q 003926 636 AENAE-KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDP 714 (786)
Q Consensus 636 ~~~~~-~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 714 (786)
..... ...+..||+.|||||++....|+.|+||||+||+.+||++|.||+...+...+... ...-..|
T Consensus 161 l~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlfl-----------Ipk~~PP 229 (467)
T KOG0201|consen 161 LTNTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFL-----------IPKSAPP 229 (467)
T ss_pred eechhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEe-----------ccCCCCC
Confidence 54333 23567899999999999988899999999999999999999999976543211000 1111122
Q ss_pred cccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 715 AVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 715 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.+.. ...+.+.+++..|+.+||+.||++.++++|-+.+.
T Consensus 230 ~L~~----~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~ 268 (467)
T KOG0201|consen 230 RLDG----DFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKR 268 (467)
T ss_pred cccc----ccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHh
Confidence 2222 22345677888999999999999999999998765
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-39 Score=332.71 Aligned_cols=263 Identities=19% Similarity=0.308 Sum_probs=204.1
Q ss_pred HHhcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCC--------------ChHHHHHHHHHHhcCCCCCccee
Q 003926 474 EATNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCH--------------STRNFMHHIELISKLRHRHLVSA 538 (786)
Q Consensus 474 ~~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~--------------~~~~f~~E~~~l~~l~H~NIv~l 538 (786)
+..++|...+.||+|.||+|-+|+. .+++.||||++.+.... ..+...+||.+|++++|||||+|
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 4467889999999999999999994 47999999999754321 12467899999999999999999
Q ss_pred eeeeeeccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCcee
Q 003926 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDIL 618 (786)
Q Consensus 539 ~g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NIL 618 (786)
+.+- +++..+.+|||+|||..|.+...=.. ...++..+..+|..++..||+|||.. +||||||||+|+|
T Consensus 174 iEvL-----DDP~s~~~YlVley~s~G~v~w~p~d---~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLL 242 (576)
T KOG0585|consen 174 IEVL-----DDPESDKLYLVLEYCSKGEVKWCPPD---KPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLL 242 (576)
T ss_pred EEee-----cCcccCceEEEEEeccCCccccCCCC---cccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheE
Confidence 9864 45667889999999999988543221 22389999999999999999999998 9999999999999
Q ss_pred ecCCCcccccCCCcccccccc------cccccccccccccCccccccCC----CCcccceeehhHHHHHHHhCCCCCCCc
Q 003926 619 LDQNLVAKISSYNLPLLAENA------EKVGHVIPYSGSIDPTNSARGK----LEEKIDIYDFGLILLEIIVGRPLKSRK 688 (786)
Q Consensus 619 ld~~~~~kl~DfGl~~~~~~~------~~~~~~~~~~~~~aPe~~~~~~----~t~ksDVwSfGvvl~ElltG~~p~~~~ 688 (786)
+++++++||+|||.+...... .......||+.++|||....+. .+.+.||||+||+||-|+.|+.||-+.
T Consensus 243 l~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~ 322 (576)
T KOG0585|consen 243 LSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDD 322 (576)
T ss_pred EcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccc
Confidence 999999999999998655211 1223467899999999887643 346889999999999999999998654
Q ss_pred hhHHH-HHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhhhh
Q 003926 689 EVDLL-KNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDA 762 (786)
Q Consensus 689 ~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~~~ 762 (786)
....+ .+++... +.-|. ..++...+.+++.++|.+||++|.+..+|..|+|.-......
T Consensus 323 ~~~~l~~KIvn~p----------L~fP~-----~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~g~~~ 382 (576)
T KOG0585|consen 323 FELELFDKIVNDP----------LEFPE-----NPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRDGDSP 382 (576)
T ss_pred hHHHHHHHHhcCc----------ccCCC-----cccccHHHHHHHHHHhhcChhheeehhhheecceeccCCCCC
Confidence 33222 2222111 11111 113345667888899999999999999999999966554444
|
|
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-39 Score=340.43 Aligned_cols=250 Identities=14% Similarity=0.270 Sum_probs=201.9
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|+..+.||+|+||.||+|+.+ +|+.||||++..... ...+.+.+|++++++++||||+++++++.+ .
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------~ 73 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHD-------Q 73 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhcc-------C
Confidence 36788899999999999999965 689999999875432 234568899999999999999999987654 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..++||||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 74 ~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~ 147 (291)
T cd05612 74 RFLYMLMEYVPGGELFSYLRNS---GRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGF 147 (291)
T ss_pred CeEEEEEeCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCc
Confidence 5789999999999999999753 3588999999999999999999997 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
++..... .....++..|+|||.+....++.++|||||||++|||++|+.||...........+. ...
T Consensus 148 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~---~~~-------- 214 (291)
T cd05612 148 AKKLRDR--TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKIL---AGK-------- 214 (291)
T ss_pred chhccCC--cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---hCC--------
Confidence 8655322 123456778999999988889999999999999999999999997654433322211 110
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCC-----HHHHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPS-----VEDVLWNLQFAA 757 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt-----~~evl~~l~~~~ 757 (786)
....... ...+.+++.+||+.||.+||+ +.|+++|.|+..
T Consensus 215 -~~~~~~~----~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~ 259 (291)
T cd05612 215 -LEFPRHL----DLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKS 259 (291)
T ss_pred -cCCCccC----CHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccC
Confidence 0011111 234667888999999999995 999999999864
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-38 Score=336.29 Aligned_cols=260 Identities=20% Similarity=0.367 Sum_probs=195.2
Q ss_pred cCCCccCccCCCCCceeEEEEecC-----------------CcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCccee
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKN-----------------GTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSA 538 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~-----------------g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l 538 (786)
++|...+.||+|+||.||+|+.++ +..||||.+...... ...+|.+|++++++++|||||++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 457778999999999999997532 347999998764322 34579999999999999999999
Q ss_pred eeeeeeccccCCCCceEEEEEecCCCCChhHHhhcCC----------------CCCCCCHHHHHHHHHHHHHHhhhhhcC
Q 003926 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGH----------------AHQSLTWTQRISAAIGVAKGIQFLHTG 602 (786)
Q Consensus 539 ~g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~----------------~~~~l~~~~~~~ia~~ia~gL~yLH~~ 602 (786)
+|++.. .+..++||||+++|+|.+++.... ....++|.....++.|++.||.|||+.
T Consensus 85 ~~~~~~-------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~ 157 (304)
T cd05096 85 LGVCVD-------EDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL 157 (304)
T ss_pred EEEEec-------CCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC
Confidence 999865 345899999999999999986421 113478899999999999999999997
Q ss_pred CCCCccccCCCCCceeecCCCcccccCCCcccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHH
Q 003926 603 IVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEII 679 (786)
Q Consensus 603 ~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ell 679 (786)
+|+||||||+|||++.++.+||+|||+++....... .....++..|+|||....+.++.++|||||||++|||+
T Consensus 158 ---~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~ 234 (304)
T cd05096 158 ---NFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEIL 234 (304)
T ss_pred ---CccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHH
Confidence 999999999999999999999999999865432211 11222345799999988888999999999999999999
Q ss_pred h--CCCCCCCchhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 680 V--GRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 680 t--G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
+ |..|+...........+........ ... .......+ +..+.+++.+||+.||++|||+.||.+.+.
T Consensus 235 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~----~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 235 MLCKEQPYGELTDEQVIENAGEFFRDQG---RQV-YLFRPPPC----PQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred HccCCCCCCcCCHHHHHHHHHHHhhhcc---ccc-cccCCCCC----CHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 7 4566665433333222222111110 000 00011112 235678889999999999999999987763
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=344.23 Aligned_cols=258 Identities=19% Similarity=0.259 Sum_probs=205.3
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|+..+.||+|+||.||+|+.. +|+.||||+++.... ...+.+.+|++++++++||||+++++++.. .
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~-------~ 73 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQD-------D 73 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEc-------C
Confidence 36888899999999999999965 589999999975432 234678999999999999999999988764 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..|+||||+++|+|.+++... ..+++.....++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 74 ~~~~lv~e~~~g~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~ 147 (333)
T cd05600 74 EYLYLAMEYVPGGDFRTLLNNL---GVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGL 147 (333)
T ss_pred CEEEEEEeCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcC
Confidence 5789999999999999999753 3588999999999999999999997 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
+..... ......++..|+|||.+....++.++|||||||++|||++|++||...........+....... ......
T Consensus 148 a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~--~~~~~~ 223 (333)
T cd05600 148 SKGIVT--YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETL--QRPVYD 223 (333)
T ss_pred Cccccc--ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccc--cCCCCC
Confidence 865433 2233456788999999988899999999999999999999999997655443322221110000 000001
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
++. ......+.+++.+||..+|++||++.|+++|+|+..
T Consensus 224 ~~~------~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~ 262 (333)
T cd05600 224 DPR------FNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKE 262 (333)
T ss_pred ccc------cccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCC
Confidence 110 112345677888999999999999999999999875
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=335.67 Aligned_cols=262 Identities=18% Similarity=0.270 Sum_probs=205.3
Q ss_pred CCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
.|+..+.||+|+||+||++... +++.||||++..... .....+.+|++++++++||||+++++++.. .+
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------~~ 73 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYET-------KD 73 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecC-------CC
Confidence 3667889999999999999954 689999999975432 223457899999999999999999988754 35
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++||||+++|+|.+++.... ...+++.....++.|++.||.|||+. +|+||||||+||++++++.++|+|||++
T Consensus 74 ~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~ 149 (285)
T cd05605 74 ALCLVLTLMNGGDLKFHIYNMG-NPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLA 149 (285)
T ss_pred eEEEEEeccCCCcHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCc
Confidence 6899999999999999886432 24589999999999999999999997 9999999999999999999999999998
Q ss_pred cccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccccc
Q 003926 634 LLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVD 713 (786)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 713 (786)
.............++..|++||.+....++.++|||||||++|||++|+.||...........+........
T Consensus 150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-------- 221 (285)
T cd05605 150 VEIPEGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQ-------- 221 (285)
T ss_pred eecCCCCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcc--------
Confidence 665433332334567789999999888899999999999999999999999976443222222211111100
Q ss_pred ccccccCcHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHHHHHHHHhhhh
Q 003926 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERP-----SVEDVLWNLQFAAQVQDA 762 (786)
Q Consensus 714 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~~l~~~~~~~~~ 762 (786)
+. .+......+.+++.+||+.||++|| +++++++|.|+.......
T Consensus 222 ~~----~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~~ 271 (285)
T cd05605 222 EE----YSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTANFKR 271 (285)
T ss_pred cc----cCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCCCHHH
Confidence 00 1112234567888999999999999 899999999987643333
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-39 Score=325.91 Aligned_cols=250 Identities=22% Similarity=0.346 Sum_probs=211.3
Q ss_pred cCCCccCccCCCCCceeEEEE-ecCCcEEEEEEecccCCCCh---HHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHST---RNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~---~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
..|++.+.||+|.||+|-+|+ ...|+.||||.+++.+..+. ..+.+|+++|+.++||||++++.++.. .
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFEN-------k 125 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFEN-------K 125 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcC-------C
Confidence 346677899999999999998 56899999999987765444 457899999999999999999988754 5
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+.+.|||||..+|.|++|+.++ ..|+......++.||..|+.|+|.+ +++|||||.+|||+|.+.++||+|||+
T Consensus 126 dKIvivMEYaS~GeLYDYiSer---~~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGL 199 (668)
T KOG0611|consen 126 DKIVIVMEYASGGELYDYISER---GSLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGL 199 (668)
T ss_pred ceEEEEEEecCCccHHHHHHHh---ccccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccch
Confidence 7799999999999999999874 4699999999999999999999998 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCccccccCCCC-cccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKLE-EKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t-~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
+.+........+.+|.+-|..||+..+..|. ..+|-||+||+||.|+.|..||++.+...+..++....+ +
T Consensus 200 SNly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaY------r-- 271 (668)
T KOG0611|consen 200 SNLYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAY------R-- 271 (668)
T ss_pred hhhhccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccc------c--
Confidence 9887777677788999999999999887774 689999999999999999999998776655554433211 1
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
.|..+ ....-++.+++..+|++|.|+.||..|-|..
T Consensus 272 -EP~~P--------SdA~gLIRwmLmVNP~RRATieDiAsHWWvN 307 (668)
T KOG0611|consen 272 -EPETP--------SDASGLIRWMLMVNPERRATIEDIASHWWVN 307 (668)
T ss_pred -CCCCC--------chHHHHHHHHHhcCcccchhHHHHhhhheee
Confidence 12111 1334577899999999999999999998843
|
|
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=343.01 Aligned_cols=246 Identities=17% Similarity=0.275 Sum_probs=198.0
Q ss_pred CccCCCCCceeEEEEe-cCCcEEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEEE
Q 003926 483 AFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLI 558 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV 558 (786)
+.||+|+||.||+|+. .+|+.||||+++.... .....+.+|++++++++||||+++++++.. .+..|+|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~-------~~~~~lv 73 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQT-------HDRLCFV 73 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEc-------CCEEEEE
Confidence 4689999999999985 4689999999975432 223568899999999999999999988764 4578999
Q ss_pred EecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccc-
Q 003926 559 FEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE- 637 (786)
Q Consensus 559 ~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~- 637 (786)
|||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 74 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~ 147 (323)
T cd05571 74 MEYANGGELFFHLSRE---RVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGIS 147 (323)
T ss_pred EeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCccccc
Confidence 9999999999998753 3589999999999999999999997 99999999999999999999999999986432
Q ss_pred cccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccccccccc
Q 003926 638 NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVN 717 (786)
Q Consensus 638 ~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 717 (786)
.........++..|+|||.+....++.++|||||||++|||+||+.||...+.......+. . .. ...+
T Consensus 148 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~---~-~~--------~~~p 215 (323)
T cd05571 148 DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL---M-EE--------IRFP 215 (323)
T ss_pred CCCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHH---c-CC--------CCCC
Confidence 2222234457889999999988889999999999999999999999997655433322211 1 10 1111
Q ss_pred ccCcHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHHHHHHH
Q 003926 718 KACLDESLKTMMEVCVRCLLKNPAERP-----SVEDVLWNLQFAA 757 (786)
Q Consensus 718 ~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~~l~~~~ 757 (786)
. .....+.+++.+||+.||++|| ++.|+++|.||..
T Consensus 216 ~----~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~ 256 (323)
T cd05571 216 R----TLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFAS 256 (323)
T ss_pred C----CCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCC
Confidence 1 1223466788899999999999 8999999998754
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-39 Score=313.02 Aligned_cols=252 Identities=19% Similarity=0.304 Sum_probs=207.1
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC---ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH---STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~---~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|+..+.||.|+||.|..++.+ +|..+|+|++++.+.- +.+...+|..+|+.+.||.+|++++.|.+ .
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d-------~ 116 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKD-------N 116 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeecc-------C
Confidence 46777899999999999999965 6899999999876543 23557889999999999999999988765 5
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+.+|+||||+++|.|..++++. ..++......+|.+|+.|++|||+. +|++||+||+|||+|.+|.+||+|||+
T Consensus 117 ~~lymvmeyv~GGElFS~Lrk~---~rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGF 190 (355)
T KOG0616|consen 117 SNLYMVMEYVPGGELFSYLRKS---GRFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGF 190 (355)
T ss_pred CeEEEEEeccCCccHHHHHHhc---CCCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccc
Confidence 6799999999999999999874 3688999999999999999999998 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
|+..... .-+.+||+.|+|||.+....|+..+|.|||||++|||+.|.+||.......+.+.+. .. .-..+..+
T Consensus 191 AK~v~~r--T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~---~~-~v~fP~~f 264 (355)
T KOG0616|consen 191 AKRVSGR--TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKIL---EG-KVKFPSYF 264 (355)
T ss_pred eEEecCc--EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHH---hC-cccCCccc
Confidence 9766432 456789999999999999999999999999999999999999998765533322221 11 11111111
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCC-----CCHHHHHHHHHHHHHh
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAER-----PSVEDVLWNLQFAAQV 759 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~R-----Pt~~evl~~l~~~~~~ 759 (786)
. ..+.+++...++.|-.+| +-..+|-.|.||....
T Consensus 265 s------------~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~ 304 (355)
T KOG0616|consen 265 S------------SDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVD 304 (355)
T ss_pred C------------HHHHHHHHHHHhhhhHhhhcCcCCCccccccCccccccc
Confidence 1 234567778889999999 4567899999998543
|
|
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-38 Score=337.18 Aligned_cols=259 Identities=18% Similarity=0.358 Sum_probs=201.4
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCc----EEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGT----FVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~----~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
.+|+..+.||+|+||.||+|++. +|. .||||.++.... ...++|.+|+.+++.++||||++++|+|..
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~------ 80 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT------ 80 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcC------
Confidence 46888899999999999999854 344 489999875432 235679999999999999999999999864
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
+..++|+||+++|+|.+++.... ..+++...+.++.|+++||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 81 --~~~~~v~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~Df 153 (316)
T cd05108 81 --STVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDF 153 (316)
T ss_pred --CCceeeeecCCCCCHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEccc
Confidence 23689999999999999997632 3588999999999999999999997 9999999999999999999999999
Q ss_pred Cccccccccccc---ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccc
Q 003926 631 NLPLLAENAEKV---GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADES 706 (786)
Q Consensus 631 Gl~~~~~~~~~~---~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (786)
|+++........ .....+..|++||......++.++|||||||++|||++ |++|+............. ...
T Consensus 154 G~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~----~~~- 228 (316)
T cd05108 154 GLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE----KGE- 228 (316)
T ss_pred cccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh----CCC-
Confidence 999765432221 11122446899999988889999999999999999998 999987654433322211 110
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhhhhh
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAW 763 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~~~~ 763 (786)
....+ ..+ ...+.+++.+||+.+|++||++.|++.++.........|
T Consensus 229 ---~~~~~---~~~----~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~~~~ 275 (316)
T cd05108 229 ---RLPQP---PIC----TIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRY 275 (316)
T ss_pred ---CCCCC---CCC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCCchh
Confidence 00001 112 234667888999999999999999999987665544443
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-38 Score=335.22 Aligned_cols=271 Identities=19% Similarity=0.313 Sum_probs=200.0
Q ss_pred CCCccCccCCCCCceeEEEEe-c-CCcEEEEEEecccCC--CChHHHHHHHHHHhcC---CCCCcceeeeeeeeccccCC
Q 003926 478 NFDTSAFMGEGSQGQMYRGRL-K-NGTFVAIRCLKMKKC--HSTRNFMHHIELISKL---RHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~-~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l---~H~NIv~l~g~~~~~~~~~~ 550 (786)
+|+..+.||+|+||+||+|+. . +|..||||+++.... .....+.+|+++++++ +||||++++++|..... .
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~--~ 79 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT--D 79 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccC--C
Confidence 578889999999999999985 3 478899999875432 2235677888877765 69999999998853221 1
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
.....++||||++ |+|.+++.... ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+||
T Consensus 80 ~~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Df 154 (290)
T cd07862 80 RETKLTLVFEHVD-QDLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADF 154 (290)
T ss_pred CCCcEEEEEccCC-CCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEccc
Confidence 2356899999997 69999987532 23589999999999999999999997 9999999999999999999999999
Q ss_pred CcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchh-HHHHHHHHHHHHhcccccc
Q 003926 631 NLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVVTADESARR 709 (786)
Q Consensus 631 Gl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~ 709 (786)
|++.............++..|+|||.+....++.++|||||||++|||++|++||..... +.+...+..........+.
T Consensus 155 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~ 234 (290)
T cd07862 155 GLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 234 (290)
T ss_pred cceEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhch
Confidence 998655433333344567889999998888899999999999999999999999976543 2232222211111100000
Q ss_pred -------cccccccc---ccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 710 -------SMVDPAVN---KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 710 -------~~~d~~~~---~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
....+... ..........+.+++.+|++.||++|||+.|+++|+||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 235 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred hhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 00000000 00001122355688899999999999999999988764
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=343.04 Aligned_cols=250 Identities=17% Similarity=0.286 Sum_probs=201.9
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|...+.||+|+||.||+|+.+ +|+.||||+++.... ...+.+.+|++++++++|||||++++++.. .
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------~ 90 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQD-------E 90 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEc-------C
Confidence 46778899999999999999965 689999999875432 234678999999999999999999998765 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..++||||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 91 ~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~ 164 (329)
T PTZ00263 91 NRVYFLLEFVVGGELFTHLRKA---GRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGF 164 (329)
T ss_pred CEEEEEEcCCCCChHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccC
Confidence 5789999999999999999753 3578888889999999999999997 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
++...... ....++..|+|||.+....++.++|||||||++|||+||++||...........+. ...
T Consensus 165 ~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~----~~~------- 231 (329)
T PTZ00263 165 AKKVPDRT--FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKIL----AGR------- 231 (329)
T ss_pred ceEcCCCc--ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHh----cCC-------
Confidence 86553321 23457788999999988889999999999999999999999997654332222111 110
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCC-----HHHHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPS-----VEDVLWNLQFAA 757 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt-----~~evl~~l~~~~ 757 (786)
...+... ...+.+++.+||+.||.+||+ +.|++.|+||..
T Consensus 232 -~~~p~~~----~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~ 276 (329)
T PTZ00263 232 -LKFPNWF----DGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHG 276 (329)
T ss_pred -cCCCCCC----CHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCC
Confidence 0011111 124567888999999999987 799999999864
|
|
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-39 Score=324.73 Aligned_cols=273 Identities=21% Similarity=0.289 Sum_probs=208.7
Q ss_pred CCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEE
Q 003926 479 FDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFL 557 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~L 557 (786)
|...+++|.|+||.||+|.. .+++.||||+.-.+..- --+|.++|+++.|||||+++-++...... ..-...+
T Consensus 26 ~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~----knrEl~im~~l~HpNIV~L~~~f~~~~~~--d~~~lnl 99 (364)
T KOG0658|consen 26 YEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY----KNRELQIMRKLDHPNIVRLLYFFSSSTES--DEVYLNL 99 (364)
T ss_pred EEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc----CcHHHHHHHhcCCcCeeeEEEEEEecCCC--chhHHHH
Confidence 45568999999999999995 46899999988654321 13689999999999999999877653221 1224568
Q ss_pred EEecCCCCChhHHhhcC-CCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCC-CcccccCCCcccc
Q 003926 558 IFEYVPNGTLRSWISEG-HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN-LVAKISSYNLPLL 635 (786)
Q Consensus 558 V~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~-~~~kl~DfGl~~~ 635 (786)
||||||. +|+++++.- +....++.....-+..|+.+||+|||+. +|+||||||.|+|+|.+ +.+||||||-|+.
T Consensus 100 VleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~ 175 (364)
T KOG0658|consen 100 VLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAKV 175 (364)
T ss_pred HHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCccee
Confidence 9999997 999998731 1234566667777899999999999996 99999999999999976 8999999999988
Q ss_pred cccccccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCch-hHHHHHHHHHHHHhcccccccc--
Q 003926 636 AENAEKVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVVTADESARRSM-- 711 (786)
Q Consensus 636 ~~~~~~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~-- 711 (786)
....+.......+..|.|||.+.+. .||.+.||||.|||+.||+-|++.|.+.+ .+.+..++.....+..+....|
T Consensus 176 L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~ 255 (364)
T KOG0658|consen 176 LVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNP 255 (364)
T ss_pred eccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCc
Confidence 8766665566677899999987654 59999999999999999999999997754 4555555555443332222221
Q ss_pred -----ccccccccC-----cHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhhh
Q 003926 712 -----VDPAVNKAC-----LDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQD 761 (786)
Q Consensus 712 -----~d~~~~~~~-----~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~~ 761 (786)
..|.+.... ......+.++++.++++.+|.+|.++.|++.|.+|-+....
T Consensus 256 ~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~ 315 (364)
T KOG0658|consen 256 NYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP 315 (364)
T ss_pred ccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc
Confidence 122222211 12334577899999999999999999999999998875443
|
|
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-38 Score=344.97 Aligned_cols=253 Identities=16% Similarity=0.253 Sum_probs=192.7
Q ss_pred CCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEE
Q 003926 479 FDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~ 556 (786)
|+..+.||+|+||.||+|+.. +|+.||||++...... ..+.|.+|++++++++|+|||++++++.. .+..+
T Consensus 76 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------~~~~~ 148 (353)
T PLN00034 76 LERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDH-------NGEIQ 148 (353)
T ss_pred HhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEecc-------CCeEE
Confidence 445688999999999999864 6899999998654322 24678999999999999999999998764 45689
Q ss_pred EEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccc
Q 003926 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636 (786)
Q Consensus 557 LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~ 636 (786)
+||||+++|+|.+.. ...+.....++.|+++||+|||+. +|+|||||++|||+++++.+||+|||+++..
T Consensus 149 lv~e~~~~~~L~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~ 218 (353)
T PLN00034 149 VLLEFMDGGSLEGTH-------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRIL 218 (353)
T ss_pred EEEecCCCCcccccc-------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceec
Confidence 999999999986532 245677788999999999999997 9999999999999999999999999998654
Q ss_pred cccc-ccccccccccccCcccccc-----CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 637 ENAE-KVGHVIPYSGSIDPTNSAR-----GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 637 ~~~~-~~~~~~~~~~~~aPe~~~~-----~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
.... ......++..|+|||.+.. ...+.++|||||||++|||++|+.||...................
T Consensus 219 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~------ 292 (353)
T PLN00034 219 AQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQ------ 292 (353)
T ss_pred ccccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccC------
Confidence 3221 1223456788999998643 224568999999999999999999987433222211111111100
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~ 760 (786)
.+... ......+.+++.+||+.||++||++.||++|.|+.+...
T Consensus 293 --~~~~~----~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~~ 336 (353)
T PLN00034 293 --PPEAP----ATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQP 336 (353)
T ss_pred --CCCCC----CccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCCc
Confidence 01111 112235678888999999999999999999999887533
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-38 Score=342.31 Aligned_cols=258 Identities=22% Similarity=0.341 Sum_probs=211.6
Q ss_pred HhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccC
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDD 549 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~ 549 (786)
..++|...++||+|+||+|+.+..+ +++.+|||.+++... ...+..+.|.+|+.-. +||.++.++.++..
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT----- 440 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQT----- 440 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeeccccccc-----
Confidence 4568889999999999999999976 588999999997753 3456788898888877 59999999986653
Q ss_pred CCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccC
Q 003926 550 SSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISS 629 (786)
Q Consensus 550 ~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 629 (786)
.+++|.||||+.|||+..+.+. ..++......+|..|+.||.|||++ +||+||||.+|||||.+|++||+|
T Consensus 441 --~~~l~fvmey~~Ggdm~~~~~~----~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiAD 511 (694)
T KOG0694|consen 441 --KEHLFFVMEYVAGGDLMHHIHT----DVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIAD 511 (694)
T ss_pred --CCeEEEEEEecCCCcEEEEEec----ccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEecc
Confidence 6789999999999996666553 3689999999999999999999998 999999999999999999999999
Q ss_pred CCcccccc-cccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccc
Q 003926 630 YNLPLLAE-NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESAR 708 (786)
Q Consensus 630 fGl~~~~~-~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (786)
||+++..- ......+.+||+-|||||++....|+..+|+|||||+||||++|++||.+.+.+++.+.+. .+
T Consensus 512 FGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~---~d----- 583 (694)
T KOG0694|consen 512 FGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIV---ND----- 583 (694)
T ss_pred cccccccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHh---cC-----
Confidence 99996543 4456678899999999999999999999999999999999999999998776665543321 11
Q ss_pred cccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCH-----HHHHHHHHHHHHhhhh
Q 003926 709 RSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSV-----EDVLWNLQFAAQVQDA 762 (786)
Q Consensus 709 ~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~-----~evl~~l~~~~~~~~~ 762 (786)
|+..+ .-...+.+.++.+.+.++|++|--+ .+|.+|++|......+
T Consensus 584 ----~~~yP----~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~ 634 (694)
T KOG0694|consen 584 ----EVRYP----RFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDWDD 634 (694)
T ss_pred ----CCCCC----CcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCHHH
Confidence 12211 1223455677789999999999765 6788999988754333
|
|
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-38 Score=343.74 Aligned_cols=272 Identities=21% Similarity=0.301 Sum_probs=199.9
Q ss_pred CCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
.|+..+.||+|+||.||+|+.. +|..||||+++.... .....+.+|++++++++||||+++++++..... .....
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~--~~~~~ 78 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSR--REFKD 78 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCC--CCCce
Confidence 3677889999999999999954 689999999875322 234578999999999999999999998764211 12245
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.|+|||||+ ++|.+++... ..+++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 79 ~~lv~e~~~-~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~ 151 (338)
T cd07859 79 IYVVFELME-SDLHQVIKAN---DDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLAR 151 (338)
T ss_pred EEEEEecCC-CCHHHHHHhc---ccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCcccc
Confidence 899999996 6999998753 3589999999999999999999997 99999999999999999999999999986
Q ss_pred ccccccc----cccccccccccCcccccc--CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccc-
Q 003926 635 LAENAEK----VGHVIPYSGSIDPTNSAR--GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESA- 707 (786)
Q Consensus 635 ~~~~~~~----~~~~~~~~~~~aPe~~~~--~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~- 707 (786)
....... .....++..|+|||.+.. ..++.++|||||||++|||+||++||...........+..........
T Consensus 152 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 231 (338)
T cd07859 152 VAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPET 231 (338)
T ss_pred ccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence 4422111 123456778999998765 578999999999999999999999997644322111111110000000
Q ss_pred ------------ccccc--cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 708 ------------RRSMV--DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 708 ------------~~~~~--d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
...+. .+.............+.+++.+||+.||++|||++|+++|+||...
T Consensus 232 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~ 296 (338)
T cd07859 232 ISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGL 296 (338)
T ss_pred HHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhc
Confidence 00000 0000000000112356788899999999999999999999998763
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-38 Score=335.16 Aligned_cols=266 Identities=20% Similarity=0.271 Sum_probs=200.1
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
++|+..+.||+|+||.||+|+.+ +++.||||+++.... ...+.+.+|++++++++||||+++++++.. .+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------~~ 73 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRR-------RG 73 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEec-------CC
Confidence 36888899999999999999975 688999999875432 234678899999999999999999998764 45
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++||||++++.+..+... ...+++.....++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 74 ~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~ 147 (287)
T cd07848 74 KLYLVFEYVEKNMLELLEEM---PNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFA 147 (287)
T ss_pred EEEEEEecCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCc
Confidence 78999999999877665432 23588999999999999999999987 9999999999999999999999999998
Q ss_pred ccccccc--ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcc------
Q 003926 634 LLAENAE--KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADE------ 705 (786)
Q Consensus 634 ~~~~~~~--~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~------ 705 (786)
....... ......++..|+|||......++.++|||||||++|||++|++||...........+........
T Consensus 148 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (287)
T cd07848 148 RNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKL 227 (287)
T ss_pred ccccccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHh
Confidence 6543221 12233567789999999888899999999999999999999999976433221111111110000
Q ss_pred ----cccccccccccc------ccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 706 ----SARRSMVDPAVN------KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 706 ----~~~~~~~d~~~~------~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
........+... ..........+.+++.+||+.||++|||++|+++|+||
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 228 FYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred hhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 000000000000 00111233467889999999999999999999998874
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-38 Score=340.24 Aligned_cols=246 Identities=16% Similarity=0.273 Sum_probs=196.6
Q ss_pred CccCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEEE
Q 003926 483 AFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLI 558 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV 558 (786)
+.||+|+||.||+++.+ +|..||+|+++.... .....+.+|++++++++||||+++++++.. .+..|+|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~-------~~~~~lv 73 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT-------HDRLCFV 73 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEec-------CCEEEEE
Confidence 46899999999999854 689999999975432 234567899999999999999999988764 4578999
Q ss_pred EecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccc-
Q 003926 559 FEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE- 637 (786)
Q Consensus 559 ~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~- 637 (786)
|||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++....
T Consensus 74 ~E~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 147 (323)
T cd05595 74 MEYANGGELFFHLSRE---RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 147 (323)
T ss_pred EeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccC
Confidence 9999999999988753 3589999999999999999999997 99999999999999999999999999986432
Q ss_pred cccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccccccccc
Q 003926 638 NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVN 717 (786)
Q Consensus 638 ~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 717 (786)
.........++..|+|||.+....++.++|||||||++|||++|+.||...+.......+. ... ..++
T Consensus 148 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~---~~~---------~~~p 215 (323)
T cd05595 148 DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL---MEE---------IRFP 215 (323)
T ss_pred CCCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHh---cCC---------CCCC
Confidence 1222233457788999999988889999999999999999999999987654433222111 000 0111
Q ss_pred ccCcHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHHHHHHH
Q 003926 718 KACLDESLKTMMEVCVRCLLKNPAERP-----SVEDVLWNLQFAA 757 (786)
Q Consensus 718 ~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~~l~~~~ 757 (786)
... ...+.+++.+||+.||++|| ++.|+++|.||..
T Consensus 216 ~~~----~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~ 256 (323)
T cd05595 216 RTL----SPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 256 (323)
T ss_pred CCC----CHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCC
Confidence 111 23456788899999999998 8999999998764
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-38 Score=339.20 Aligned_cols=246 Identities=18% Similarity=0.308 Sum_probs=196.7
Q ss_pred CccCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEEE
Q 003926 483 AFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLI 558 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV 558 (786)
+.||+|+||.||+++.+ +|+.||||++..... .....+.+|++++++++||||+++++++.. .+..++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------~~~~~lv 73 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQT-------KDRLCFV 73 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEc-------CCEEEEE
Confidence 36899999999999854 689999999975432 234578899999999999999999988764 4578999
Q ss_pred EecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccccc
Q 003926 559 FEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAEN 638 (786)
Q Consensus 559 ~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~ 638 (786)
|||+++|+|.+++... ..+++.+...++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 74 ~Ey~~~g~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~ 147 (328)
T cd05593 74 MEYVNGGELFFHLSRE---RVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGIT 147 (328)
T ss_pred EeCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCC
Confidence 9999999999998753 3589999999999999999999997 999999999999999999999999999864321
Q ss_pred -ccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccccccccc
Q 003926 639 -AEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVN 717 (786)
Q Consensus 639 -~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 717 (786)
........++..|+|||.+....++.++|||||||++|||++|+.||...........+. . . +..++
T Consensus 148 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~---~-~--------~~~~p 215 (328)
T cd05593 148 DAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL---M-E--------DIKFP 215 (328)
T ss_pred cccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhc---c-C--------CccCC
Confidence 222233457788999999988889999999999999999999999997654333222111 0 0 01111
Q ss_pred ccCcHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHHHHHHH
Q 003926 718 KACLDESLKTMMEVCVRCLLKNPAERP-----SVEDVLWNLQFAA 757 (786)
Q Consensus 718 ~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~~l~~~~ 757 (786)
.. ....+.+++.+||++||++|| ++.|+++|.||..
T Consensus 216 ~~----~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~ 256 (328)
T cd05593 216 RT----LSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTG 256 (328)
T ss_pred CC----CCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCC
Confidence 11 123456788899999999997 8999999998754
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=332.65 Aligned_cols=246 Identities=29% Similarity=0.538 Sum_probs=187.4
Q ss_pred cCccCCCCCceeEEEEec-----CCcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 482 SAFMGEGSQGQMYRGRLK-----NGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 482 ~~~iG~G~fg~Vy~~~~~-----~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
.+.||.|.||.||+|.+. .+..|+||.++..... ..+.|.+|++.+++++||||++++|+|.. .+..
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~-------~~~~ 76 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIE-------NEPL 76 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEES-------SSSE
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccc-------cccc
Confidence 578999999999999976 3678999999654332 35789999999999999999999999984 3458
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
++||||+++|+|.++|... ....+++.++..++.|+|+||.|||+. +++|+||+++||++++++.+||+|||++..
T Consensus 77 ~lv~e~~~~g~L~~~L~~~-~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~ 152 (259)
T PF07714_consen 77 FLVMEYCPGGSLDDYLKSK-NKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRP 152 (259)
T ss_dssp EEEEE--TTEBHHHHHHHT-CTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEE
T ss_pred ccccccccccccccccccc-ccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccc
Confidence 9999999999999999874 234689999999999999999999997 899999999999999999999999999865
Q ss_pred cccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 636 AENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 636 ~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
...... .........|+|||......++.++||||||+++|||++ |+.|+.......+...+. .. ..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~----~~--~~--- 223 (259)
T PF07714_consen 153 ISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLK----QG--QR--- 223 (259)
T ss_dssp TTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHH----TT--EE---
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc----cc--cc---
Confidence 521111 112233457889999988889999999999999999999 778887654443322221 11 00
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNL 753 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l 753 (786)
+.....++ ..+.+++.+||..||++||+|.||++.|
T Consensus 224 --~~~~~~~~----~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 224 --LPIPDNCP----KDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp --TTSBTTSB----HHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred --ceeccchh----HHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 01111122 3566888899999999999999999865
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-38 Score=328.94 Aligned_cols=258 Identities=17% Similarity=0.244 Sum_probs=206.1
Q ss_pred HhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
..++|+...+||+|+||.||.|+-+ +|..+|+|++++... ...+..+.|-.+|....+|+||+|+-.+.+
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD------ 212 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQD------ 212 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecC------
Confidence 5678999999999999999999954 699999999987643 334668889999999999999999865543
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
.+.+||||||.||||+..+|... ..|+......++.+.+-|++-+|+. ++|||||||+|+|||..|++||+||
T Consensus 213 -~~~LYLiMEylPGGD~mTLL~~~---~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDF 285 (550)
T KOG0605|consen 213 -KEYLYLIMEYLPGGDMMTLLMRK---DTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDF 285 (550)
T ss_pred -CCeeEEEEEecCCccHHHHHHhc---CcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccc
Confidence 57899999999999999999863 4688888888999999999999998 9999999999999999999999999
Q ss_pred Cccccccc------------------------cc-----cc-------------------ccccccccccCccccccCCC
Q 003926 631 NLPLLAEN------------------------AE-----KV-------------------GHVIPYSGSIDPTNSARGKL 662 (786)
Q Consensus 631 Gl~~~~~~------------------------~~-----~~-------------------~~~~~~~~~~aPe~~~~~~~ 662 (786)
||+.-... .. .. ....||+-|||||++.+..|
T Consensus 286 GLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY 365 (550)
T KOG0605|consen 286 GLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGY 365 (550)
T ss_pred cccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCC
Confidence 99732110 00 00 12357888999999999999
Q ss_pred CcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCC
Q 003926 663 EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAE 742 (786)
Q Consensus 663 t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~ 742 (786)
+..+|+||+|||+|||+.|-|||...........+..+..... .++- .....+..+++.+|+. ||++
T Consensus 366 ~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~--fP~~----------~~~s~eA~DLI~rll~-d~~~ 432 (550)
T KOG0605|consen 366 GKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLK--FPEE----------VDLSDEAKDLITRLLC-DPEN 432 (550)
T ss_pred CccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhcc--CCCc----------CcccHHHHHHHHHHhc-CHHH
Confidence 9999999999999999999999988766554333322211110 0000 0111456788889999 9999
Q ss_pred CC---CHHHHHHHHHHHHH
Q 003926 743 RP---SVEDVLWNLQFAAQ 758 (786)
Q Consensus 743 RP---t~~evl~~l~~~~~ 758 (786)
|- .+.||-+|+||...
T Consensus 433 RLG~~G~~EIK~HPfF~~v 451 (550)
T KOG0605|consen 433 RLGSKGAEEIKKHPFFKGV 451 (550)
T ss_pred hcCcccHHHHhcCCccccC
Confidence 95 59999999999864
|
|
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-38 Score=345.21 Aligned_cols=255 Identities=21% Similarity=0.353 Sum_probs=196.7
Q ss_pred HhcCCCccCccCCCCCceeEEEEe------cCCcEEEEEEecccCC-CChHHHHHHHHHHhcC-CCCCcceeeeeeeecc
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRL------KNGTFVAIRCLKMKKC-HSTRNFMHHIELISKL-RHRHLVSALGHCFECY 546 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~ 546 (786)
..++|+..+.||+|+||.||+|+. .++..||||+++.... ...+.+.+|+++++.+ +|||||+++|+|..
T Consensus 33 ~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~-- 110 (375)
T cd05104 33 PRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTV-- 110 (375)
T ss_pred chHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeecc--
Confidence 345678889999999999999973 2466899999975432 2346789999999999 89999999999865
Q ss_pred ccCCCCceEEEEEecCCCCChhHHhhcCCC--------------------------------------------------
Q 003926 547 FDDSSVSRIFLIFEYVPNGTLRSWISEGHA-------------------------------------------------- 576 (786)
Q Consensus 547 ~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~-------------------------------------------------- 576 (786)
.+..++|||||++|+|.++++....
T Consensus 111 -----~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 185 (375)
T cd05104 111 -----GGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADK 185 (375)
T ss_pred -----CCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccc
Confidence 3568999999999999999864211
Q ss_pred ----------------------CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 577 ----------------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 577 ----------------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
...++|...++++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 262 (375)
T cd05104 186 RRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLAR 262 (375)
T ss_pred ccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccce
Confidence 12478999999999999999999997 99999999999999999999999999986
Q ss_pred cccccccc---ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhH-HHHHHHHHHHHhcccccc
Q 003926 635 LAENAEKV---GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVD-LLKNQLQAVVTADESARR 709 (786)
Q Consensus 635 ~~~~~~~~---~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~-~~~~~~~~~~~~~~~~~~ 709 (786)
........ .....+..|+|||......++.++|||||||++|||++ |.+||...... .....+. .. .+
T Consensus 263 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~----~~---~~ 335 (375)
T cd05104 263 DIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIK----EG---YR 335 (375)
T ss_pred eccCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHH----hC---cc
Confidence 54322211 11222346999999988889999999999999999998 88888654322 2211111 10 00
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
. ..+. ....++.+++.+||+.||++||+|.||+++++
T Consensus 336 ~-~~~~-------~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~ 372 (375)
T cd05104 336 M-LSPE-------CAPSEMYDIMKSCWDADPLKRPTFKQIVQLIE 372 (375)
T ss_pred C-CCCC-------CCCHHHHHHHHHHccCChhHCcCHHHHHHHHH
Confidence 0 0111 11235678889999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-38 Score=337.09 Aligned_cols=244 Identities=14% Similarity=0.242 Sum_probs=195.6
Q ss_pred cCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEEEEe
Q 003926 485 MGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFE 560 (786)
Q Consensus 485 iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV~E 560 (786)
||+|+||.||+|+.. +++.||+|+++... ......+.+|++++++++|||||++++++.. .+..++|||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------~~~~~lv~e 73 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQS-------PEKLYLVLA 73 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEec-------CCeEEEEEc
Confidence 699999999999965 68899999987542 2234568899999999999999999988764 456899999
Q ss_pred cCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccccc-c
Q 003926 561 YVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAEN-A 639 (786)
Q Consensus 561 y~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~-~ 639 (786)
|+++|+|.+++... ..+++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.... .
T Consensus 74 ~~~~g~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~ 147 (312)
T cd05585 74 FINGGELFHHLQRE---GRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD 147 (312)
T ss_pred CCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccCC
Confidence 99999999999753 3589999999999999999999997 999999999999999999999999999864322 2
Q ss_pred cccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccccccccccc
Q 003926 640 EKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKA 719 (786)
Q Consensus 640 ~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 719 (786)
.......++..|+|||.+....++.++|||||||++|||+||++||........... ..... ...+
T Consensus 148 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~---~~~~~---------~~~~-- 213 (312)
T cd05585 148 DKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRK---ILQEP---------LRFP-- 213 (312)
T ss_pred CccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHH---HHcCC---------CCCC--
Confidence 222334577889999999888899999999999999999999999976544332211 11110 0111
Q ss_pred CcHHHHHHHHHHHHHhccCCCCCCC---CHHHHHHHHHHHH
Q 003926 720 CLDESLKTMMEVCVRCLLKNPAERP---SVEDVLWNLQFAA 757 (786)
Q Consensus 720 ~~~~~~~~~~~l~~~Cl~~dP~~RP---t~~evl~~l~~~~ 757 (786)
......+.+++.+||+.||++|| ++.|++.|+|+.+
T Consensus 214 --~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~ 252 (312)
T cd05585 214 --DGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQ 252 (312)
T ss_pred --CcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCC
Confidence 11223466788899999999997 5799999999775
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-38 Score=332.86 Aligned_cols=266 Identities=17% Similarity=0.279 Sum_probs=199.1
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
++|...+.||+|+||.||+|+.+ ++..||+|+++.... .....+.+|++++++++||||+++++++.. .+.
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-------~~~ 77 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHT-------ERC 77 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcC-------CCe
Confidence 46788899999999999999865 689999999875432 234568899999999999999999998754 356
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++||||++ |+|.+++.... ..+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 78 ~~lv~e~~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~ 151 (288)
T cd07871 78 LTLVFEYLD-SDLKQYLDNCG--NLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLAR 151 (288)
T ss_pred EEEEEeCCC-cCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCccee
Confidence 899999998 49999886532 3578899999999999999999997 99999999999999999999999999986
Q ss_pred cccccc-ccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHH-hcccccccc
Q 003926 635 LAENAE-KVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVT-ADESARRSM 711 (786)
Q Consensus 635 ~~~~~~-~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 711 (786)
...... ......++..|+|||.+.. ..++.++||||+||++|||+||++||...........+..... .....+...
T Consensus 152 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (288)
T cd07871 152 AKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGI 231 (288)
T ss_pred eccCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhcc
Confidence 443221 2223445678999998754 4689999999999999999999999976543332222211111 111111111
Q ss_pred ---------cccccccc----CcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 712 ---------VDPAVNKA----CLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 712 ---------~d~~~~~~----~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
..+..... .......+..+++.+|++.||.+|||++|+++|+||
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 232 TSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred ccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 00110000 000112356788999999999999999999998874
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=306.84 Aligned_cols=259 Identities=18% Similarity=0.333 Sum_probs=212.3
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCC----C----hHHHHHHHHHHhcC-CCCCcceeeeeeeec
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCH----S----TRNFMHHIELISKL-RHRHLVSALGHCFEC 545 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~----~----~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~ 545 (786)
-+.|...+++|.|..++|.++.. ++|..+|+|++...... . .++-.+|+.+|+++ .||+|+++.+++..
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes- 94 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES- 94 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC-
Confidence 34577889999999999999985 47899999999754321 1 24567899999998 69999999998765
Q ss_pred cccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcc
Q 003926 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVA 625 (786)
Q Consensus 546 ~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~ 625 (786)
....++|+|.|+.|.|.|+|.+ ...++.....+|+.|+..|+.|||.. .||||||||+|||+|++.++
T Consensus 95 ------~sF~FlVFdl~prGELFDyLts---~VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i 162 (411)
T KOG0599|consen 95 ------DAFVFLVFDLMPRGELFDYLTS---KVTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNI 162 (411)
T ss_pred ------cchhhhhhhhcccchHHHHhhh---heeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccce
Confidence 4568999999999999999986 34688899999999999999999998 99999999999999999999
Q ss_pred cccCCCcccccccccccccccccccccCcccccc------CCCCcccceeehhHHHHHHHhCCCCCCCch-hHHHHHHHH
Q 003926 626 KISSYNLPLLAENAEKVGHVIPYSGSIDPTNSAR------GKLEEKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQ 698 (786)
Q Consensus 626 kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~------~~~t~ksDVwSfGvvl~ElltG~~p~~~~~-~~~~~~~~~ 698 (786)
||+|||+++....+++....+||++|.|||.+.. ..|+..+|+|+.||+||.|+.|.+||.... ...++.+++
T Consensus 163 ~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~Ime 242 (411)
T KOG0599|consen 163 KISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIME 242 (411)
T ss_pred EEeccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHh
Confidence 9999999999988888889999999999998764 347889999999999999999999985432 222333222
Q ss_pred HHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 003926 699 AVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760 (786)
Q Consensus 699 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~ 760 (786)
...... .| ..+.......+++.+|++.||.+|-|++|++.|+||.+..+
T Consensus 243 GkyqF~--------sp-----eWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~~~ 291 (411)
T KOG0599|consen 243 GKYQFR--------SP-----EWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQIAQ 291 (411)
T ss_pred cccccC--------Cc-----chhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHHHHH
Confidence 211111 11 22334456678999999999999999999999999987544
|
|
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=326.56 Aligned_cols=251 Identities=20% Similarity=0.310 Sum_probs=196.3
Q ss_pred cCCCccCccCCCCCceeEEEEec----CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK----NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
++|+..+.||+|+||.||+|.++ .+..||+|.++.... ...+.|.+|+.++++++||||++++|++..
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------- 77 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITR------- 77 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEec-------
Confidence 45778899999999999999853 367899999886532 224579999999999999999999998764
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
.+..++||||+++|+|.+++.... ..++|.+++.++.|++.||+|||+. +++||||||+||+++.++.+|++|||
T Consensus 78 ~~~~~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg 152 (266)
T cd05064 78 GNTMMIVTEYMSNGALDSFLRKHE--GQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFR 152 (266)
T ss_pred CCCcEEEEEeCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCc
Confidence 456899999999999999997532 3689999999999999999999987 99999999999999999999999999
Q ss_pred cccccccccccc--cccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccccc
Q 003926 632 LPLLAENAEKVG--HVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESAR 708 (786)
Q Consensus 632 l~~~~~~~~~~~--~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (786)
.+.......... ...++..|+|||......++.++|||||||++||+++ |++||...........+. .. .
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~----~~---~ 225 (266)
T cd05064 153 RLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVE----DG---F 225 (266)
T ss_pred ccccccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHH----CC---C
Confidence 864432211111 1223356899999888899999999999999999775 999987654433222211 10 0
Q ss_pred cccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 709 RSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 709 ~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
. +..... ....+.+++.+||+.+|++||++.||++.+.
T Consensus 226 ~----~~~~~~----~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~ 263 (266)
T cd05064 226 R----LPAPRN----CPNLLHQLMLDCWQKERGERPRFSQIHSILS 263 (266)
T ss_pred C----CCCCCC----CCHHHHHHHHHHcCCCchhCCCHHHHHHHHH
Confidence 0 011112 2235677888999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-37 Score=322.06 Aligned_cols=249 Identities=20% Similarity=0.352 Sum_probs=197.3
Q ss_pred cCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~ 556 (786)
++|+..+.||+|+||.||+|+++++..+|+|.++... ...++|.+|++++++++||||++++++|.. .+..+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~~~~ 75 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQ-------QKPLY 75 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEcc-------CCCEE
Confidence 3567788999999999999998888899999886443 335689999999999999999999998864 35689
Q ss_pred EEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccc
Q 003926 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636 (786)
Q Consensus 557 LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~ 636 (786)
+||||+++|+|.++++... ..++|..++.++.|++.||+|||+. +|+||||||+||++++++.+|++|||.++..
T Consensus 76 iv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~ 150 (256)
T cd05114 76 IVTEFMENGCLLNYLRQRQ--GKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYV 150 (256)
T ss_pred EEEEcCCCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCcccc
Confidence 9999999999999997532 2589999999999999999999987 9999999999999999999999999998644
Q ss_pred cccccc--ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccccccccc
Q 003926 637 ENAEKV--GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMVD 713 (786)
Q Consensus 637 ~~~~~~--~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 713 (786)
...... ....++..|+|||......++.++||||||+++|||++ |++||...........+.. .. ....
T Consensus 151 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~---~~-----~~~~ 222 (256)
T cd05114 151 LDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISR---GF-----RLYR 222 (256)
T ss_pred CCCceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC---CC-----CCCC
Confidence 222111 11123346899999888889999999999999999999 8999876543332222111 00 0111
Q ss_pred ccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 003926 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNL 753 (786)
Q Consensus 714 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l 753 (786)
+.. ....+.+++.+||+.+|++||++.|+++.+
T Consensus 223 ~~~-------~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 223 PKL-------ASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred CCC-------CCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 111 123567889999999999999999999765
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=336.17 Aligned_cols=270 Identities=17% Similarity=0.290 Sum_probs=203.8
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
.++|+..+.||+|+||.||+|+.+ ++..+|+|.+..... .....|.+|++++++++|+|||+++++|.. .+
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------~~ 76 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-------DG 76 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEE-------CC
Confidence 367888999999999999999965 688999998876432 224579999999999999999999999876 45
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++||||+++|+|.+++... ..+++.....++.+++.||.|||+. .+|+||||||+||+++.++.+||+|||++
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~l~~~l~~lH~~--~~ivH~dlkp~Nili~~~~~~kL~Dfg~~ 151 (333)
T cd06650 77 EISICMEHMDGGSLDQVLKKA---GRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVS 151 (333)
T ss_pred EEEEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChhhEEEcCCCCEEEeeCCcc
Confidence 789999999999999999753 3578888999999999999999974 26999999999999999999999999998
Q ss_pred cccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccc------
Q 003926 634 LLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESA------ 707 (786)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~------ 707 (786)
...... ......++..|+|||......++.++|||||||++|||++|+.||...........+..........
T Consensus 152 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (333)
T cd06650 152 GQLIDS-MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPR 230 (333)
T ss_pred hhhhhh-ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcc
Confidence 644221 1122346678999999988889999999999999999999999987544332221111000000000
Q ss_pred ccc------cccccc------------------cccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 708 RRS------MVDPAV------------------NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 708 ~~~------~~d~~~------------------~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
.+. ..++.. ..........++.+++.+||+.||++|||+.|+++|.|+...
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 305 (333)
T cd06650 231 PRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 305 (333)
T ss_pred cCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcC
Confidence 000 000000 000000112356788899999999999999999999998765
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-38 Score=317.01 Aligned_cols=276 Identities=21% Similarity=0.341 Sum_probs=212.0
Q ss_pred CCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCC-cceeeeeeeeccccCCCCc
Q 003926 478 NFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRH-LVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~N-Iv~l~g~~~~~~~~~~~~~ 553 (786)
.|+..+.||+|+||+||+|+. .+|+.||+|++...... ......+|+.++++++|+| ||.+++++..... .....
T Consensus 12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~-~~~~~ 90 (323)
T KOG0594|consen 12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNN-HRGIG 90 (323)
T ss_pred HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccc-ccccc
Confidence 345567899999999999994 57999999999866442 2355689999999999999 9999999875221 12234
Q ss_pred eEEEEEecCCCCChhHHhhcCCCC-CCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAH-QSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~-~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
..++||||+.. +|.+++...... ..++-.....++.|+.+||+|||++ +|+||||||.|||+++++..||+|||+
T Consensus 91 ~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFGl 166 (323)
T KOG0594|consen 91 KLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFGL 166 (323)
T ss_pred eEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccch
Confidence 78999999986 999999864321 3566678889999999999999998 999999999999999999999999999
Q ss_pred ccccc-cccccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCc-hhHHHHHHHHHHHHhcccccc
Q 003926 633 PLLAE-NAEKVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRK-EVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 633 ~~~~~-~~~~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~-~~~~~~~~~~~~~~~~~~~~~ 709 (786)
|+... ..........|..|.|||.+.+. .|+..+||||+|||+.||+++++.|.+. +.+++..+......+.+..++
T Consensus 167 Ara~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp 246 (323)
T KOG0594|consen 167 ARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWP 246 (323)
T ss_pred HHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCC
Confidence 97654 33445566677889999998765 6999999999999999999999988764 444555554444444443333
Q ss_pred ccc---c--cccccc--------CcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 710 SMV---D--PAVNKA--------CLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 710 ~~~---d--~~~~~~--------~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
.+. + +..... ..........+++.+|++.+|++|.|++.+++|.+|...
T Consensus 247 ~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~ 308 (323)
T KOG0594|consen 247 GVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL 308 (323)
T ss_pred CccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence 322 1 000000 001111367788899999999999999999999988764
|
|
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-38 Score=339.92 Aligned_cols=251 Identities=17% Similarity=0.236 Sum_probs=201.3
Q ss_pred hcCCCccCccCCCCCceeEEEEecC--CcEEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLKN--GTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~~--g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
.++|+..+.||+|+||.||+|..+. +..||+|++..... ...+.+.+|+++++.++|||||++++++..
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~------ 102 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKD------ 102 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEe------
Confidence 3467888999999999999998543 36899999865432 234678899999999999999999998865
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
.+..++||||+++|+|.+++... ..+++.....++.|++.||.|||+. +|+||||||+|||++.++.+||+||
T Consensus 103 -~~~~~lv~Ey~~~g~L~~~i~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DF 175 (340)
T PTZ00426 103 -ESYLYLVLEFVIGGEFFTFLRRN---KRFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDF 175 (340)
T ss_pred -CCEEEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecC
Confidence 45689999999999999999753 3588999999999999999999997 9999999999999999999999999
Q ss_pred CcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 631 NLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 631 Gl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
|++...... .....++..|+|||.+....++.++|||||||++|||++|++||...........+. . .. .
T Consensus 176 G~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~---~-~~---~- 245 (340)
T PTZ00426 176 GFAKVVDTR--TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKIL---E-GI---I- 245 (340)
T ss_pred CCCeecCCC--cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHh---c-CC---C-
Confidence 998655322 223457788999999988889999999999999999999999997654432222111 1 00 0
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERP-----SVEDVLWNLQFAA 757 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~~l~~~~ 757 (786)
... ... ...+.+++.+|++.||++|+ +++|+++|+||..
T Consensus 246 ~~p----~~~----~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~ 289 (340)
T PTZ00426 246 YFP----KFL----DNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGN 289 (340)
T ss_pred CCC----CCC----CHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCC
Confidence 011 111 12355788899999999995 8999999999864
|
|
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-38 Score=350.44 Aligned_cols=275 Identities=16% Similarity=0.246 Sum_probs=201.0
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccC-CCCc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDD-SSVS 553 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~-~~~~ 553 (786)
..+|...+.||+|+||.||+|+. .+++.||||++.... ....+|+.++++++|||||++++++....+.. ....
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 45788999999999999999986 468999999885432 23457999999999999999999865422211 1223
Q ss_pred eEEEEEecCCCCChhHHhhcC-CCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC-cccccCCC
Q 003926 554 RIFLIFEYVPNGTLRSWISEG-HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL-VAKISSYN 631 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~-~~kl~DfG 631 (786)
..++||||+++ +|.+++... .....+++.....++.|+++||+|||+. +|+||||||+|||++.+. .+||+|||
T Consensus 141 ~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~DFG 216 (440)
T PTZ00036 141 FLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCDFG 216 (440)
T ss_pred EEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeeccc
Confidence 56799999985 777776531 2234689999999999999999999997 999999999999999664 79999999
Q ss_pred cccccccccccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchh-HHHHHHHHHHHHhccccc-
Q 003926 632 LPLLAENAEKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVVTADESAR- 708 (786)
Q Consensus 632 l~~~~~~~~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~- 708 (786)
+++............++..|+|||.+.+ ..|+.++|||||||++|||+||++||..... +.+...++..........
T Consensus 217 la~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~ 296 (440)
T PTZ00036 217 SAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLK 296 (440)
T ss_pred cchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHH
Confidence 9976544333334456788999998755 4689999999999999999999999976433 333332222111100000
Q ss_pred ------ccccccc-----ccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 709 ------RSMVDPA-----VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 709 ------~~~~d~~-----~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
.+..-+. +....+.....++.+++.+||+.||.+|||+.|+++|+||...
T Consensus 297 ~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~ 357 (440)
T PTZ00036 297 EMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDL 357 (440)
T ss_pred HhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhh
Confidence 0000000 0011111223467789999999999999999999999999764
|
|
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-38 Score=343.01 Aligned_cols=257 Identities=21% Similarity=0.338 Sum_probs=196.3
Q ss_pred HhcCCCccCccCCCCCceeEEEEec------CCcEEEEEEecccCCC-ChHHHHHHHHHHhcC-CCCCcceeeeeeeecc
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKCH-STRNFMHHIELISKL-RHRHLVSALGHCFECY 546 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~ 546 (786)
..++|+..+.||+|+||.||+|+.. ++..||||+++..... ..+.+.+|+++++.+ +|+|||+++|+|..
T Consensus 36 ~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~-- 113 (374)
T cd05106 36 PRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTH-- 113 (374)
T ss_pred cHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecC--
Confidence 3457888999999999999999742 3458999999754322 245688999999999 89999999998865
Q ss_pred ccCCCCceEEEEEecCCCCChhHHhhcCC---------------------------------------------------
Q 003926 547 FDDSSVSRIFLIFEYVPNGTLRSWISEGH--------------------------------------------------- 575 (786)
Q Consensus 547 ~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~--------------------------------------------------- 575 (786)
.+..++|||||++|+|.++++...
T Consensus 114 -----~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (374)
T cd05106 114 -----GGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVS 188 (374)
T ss_pred -----CCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcc
Confidence 356899999999999999986421
Q ss_pred ----------------CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccccc
Q 003926 576 ----------------AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENA 639 (786)
Q Consensus 576 ----------------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~ 639 (786)
....+++.+.++++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~ 265 (374)
T cd05106 189 SSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMND 265 (374)
T ss_pred ccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCC
Confidence 012478889999999999999999997 9999999999999999999999999998654322
Q ss_pred ccc---ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccccccccccc
Q 003926 640 EKV---GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPA 715 (786)
Q Consensus 640 ~~~---~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 715 (786)
... ....++..|+|||......++.++|||||||++|||++ |+.||........... ..... . ....+
T Consensus 266 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~---~~~~~---~-~~~~~- 337 (374)
T cd05106 266 SNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYK---MVKRG---Y-QMSRP- 337 (374)
T ss_pred cceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHH---HHHcc---c-CccCC-
Confidence 111 11223346999999888889999999999999999997 9999875432211111 11100 0 00011
Q ss_pred ccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 716 VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 716 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
.....++.+++.+||+.||++|||+.||++.+..
T Consensus 338 ------~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~ 371 (374)
T cd05106 338 ------DFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQR 371 (374)
T ss_pred ------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 1112456788889999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-37 Score=331.02 Aligned_cols=276 Identities=18% Similarity=0.290 Sum_probs=203.5
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
.++|+..+.||+|+||.||+|+.+ +++.||||+++.... .....+.+|++++++++||||+++++++.. .+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-------~~ 76 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHT-------KE 76 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEec-------CC
Confidence 367888999999999999999965 689999999975543 234567899999999999999999998764 35
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++||||++ |+|.+++.... ..+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 77 ~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~ 150 (303)
T cd07869 77 TLTLVFEYVH-TDLCQYMDKHP--GGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLA 150 (303)
T ss_pred eEEEEEECCC-cCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcc
Confidence 6899999996 68888876532 3588888999999999999999997 9999999999999999999999999998
Q ss_pred cccccc-cccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchh--HHHHHHHHHHHHhcccccc
Q 003926 634 LLAENA-EKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEV--DLLKNQLQAVVTADESARR 709 (786)
Q Consensus 634 ~~~~~~-~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~--~~~~~~~~~~~~~~~~~~~ 709 (786)
...... .......++..|+|||.+.. ..++.++||||+||++|||++|++||..... +.+..............+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (303)
T cd07869 151 RAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWP 230 (303)
T ss_pred eeccCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhcc
Confidence 643221 12223445678999998754 4588999999999999999999999975321 1111111111000000000
Q ss_pred c-----ccccc-cc---ccCcH------HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhhhhhc
Q 003926 710 S-----MVDPA-VN---KACLD------ESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWH 764 (786)
Q Consensus 710 ~-----~~d~~-~~---~~~~~------~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~~~~~ 764 (786)
. ..++. .. ..... .....+.+++.+|++.||++|||+.|+++|+||......-|+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~~~~~~ 300 (303)
T cd07869 231 GVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLPPRLWE 300 (303)
T ss_pred chhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccCChhhhh
Confidence 0 00000 00 00000 012356688899999999999999999999999876555554
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=328.51 Aligned_cols=256 Identities=20% Similarity=0.299 Sum_probs=212.6
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
++|...+.+|+|+||.++..+.+ ++..+++|.+...... .++...+|+.++++++|||||.+.+.+.+ ++.
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~------~~~ 77 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEE------DGQ 77 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhc------CCc
Confidence 45777899999999999988865 5789999999866533 34568899999999999999999998875 133
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..+|||+||+||++.+.|.+.+ +..++..+....+.|+..|++|||++ .|+|||||+.||++..+..+||+|||+|
T Consensus 78 ~l~Ivm~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGla 153 (426)
T KOG0589|consen 78 LLCIVMEYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLA 153 (426)
T ss_pred eEEEEEeecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhh
Confidence 4899999999999999998754 35688899999999999999999987 9999999999999999999999999999
Q ss_pred ccccccc-ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 634 LLAENAE-KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 634 ~~~~~~~-~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
+...... ......||+.|++||.+.+..|+.|+||||+||++|||++=+++|...+...+...+.... .
T Consensus 154 K~l~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~----------~ 223 (426)
T KOG0589|consen 154 KILNPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGL----------Y 223 (426)
T ss_pred hhcCCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhcc----------C
Confidence 8876655 4556789999999999999999999999999999999999999999887765544332211 1
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
+| .+.....++..++..|++++|..||++.|++.++....
T Consensus 224 ~P-----lp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~~ 263 (426)
T KOG0589|consen 224 SP-----LPSMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLLR 263 (426)
T ss_pred CC-----CCccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhhh
Confidence 11 11222345667788999999999999999999876553
|
|
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-38 Score=336.98 Aligned_cols=246 Identities=16% Similarity=0.275 Sum_probs=196.1
Q ss_pred CccCCCCCceeEEEEe-cCCcEEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEEE
Q 003926 483 AFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLI 558 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV 558 (786)
+.||+|+||.||+++. .+|..||+|+++.... .....+.+|+++++.++||||+++++++.. .+..|+|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~-------~~~~~lv 73 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT-------HDRLCFV 73 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEc-------CCEEEEE
Confidence 4689999999999985 4789999999975432 224567899999999999999999987764 4578999
Q ss_pred EecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhc-CCCCCccccCCCCCceeecCCCcccccCCCcccccc
Q 003926 559 FEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHT-GIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637 (786)
Q Consensus 559 ~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~-~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~ 637 (786)
|||+++|+|.+++... ..+++.....++.|++.||+|||+ . +|+||||||+|||++.++.+||+|||+++...
T Consensus 74 ~E~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~ 147 (325)
T cd05594 74 MEYANGGELFFHLSRE---RVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 147 (325)
T ss_pred EeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecC
Confidence 9999999999988753 358999999999999999999996 4 89999999999999999999999999986432
Q ss_pred -cccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccc
Q 003926 638 -NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAV 716 (786)
Q Consensus 638 -~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 716 (786)
.........++..|+|||.+....++.++|||||||++|||+||+.||.....+.....+. ... ...
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~----~~~--------~~~ 215 (325)
T cd05594 148 KDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL----MEE--------IRF 215 (325)
T ss_pred CCCcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHh----cCC--------CCC
Confidence 2222233457788999999988889999999999999999999999997654433322211 000 011
Q ss_pred cccCcHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHHHHHHH
Q 003926 717 NKACLDESLKTMMEVCVRCLLKNPAERP-----SVEDVLWNLQFAA 757 (786)
Q Consensus 717 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~~l~~~~ 757 (786)
+.. ....+.+++.+||+.||++|+ ++.|+++|.|+..
T Consensus 216 p~~----~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~ 257 (325)
T cd05594 216 PRT----LSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAG 257 (325)
T ss_pred CCC----CCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCC
Confidence 111 123456788899999999996 9999999998764
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-39 Score=313.77 Aligned_cols=251 Identities=21% Similarity=0.336 Sum_probs=207.3
Q ss_pred CCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEE
Q 003926 479 FDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFL 557 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~L 557 (786)
|++...||+|+||.||||.++ .|++||||.+... .+.+++.+|+.+|.+++.|+||+++|.++. ...+|+
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK-------~sDLWI 105 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFK-------HSDLWI 105 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhcc-------CCceEe
Confidence 566789999999999999854 7999999987654 357899999999999999999999997764 456999
Q ss_pred EEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccc
Q 003926 558 IFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637 (786)
Q Consensus 558 V~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~ 637 (786)
|||||..|+..+.++-++ ..|+......+..+..+||+|||.. .-||||||+.|||++-+|.+|++|||++....
T Consensus 106 VMEYCGAGSiSDI~R~R~--K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLT 180 (502)
T KOG0574|consen 106 VMEYCGAGSISDIMRARR--KPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLT 180 (502)
T ss_pred ehhhcCCCcHHHHHHHhc--CCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhh
Confidence 999999999999998643 4799999999999999999999987 78999999999999999999999999985443
Q ss_pred -cccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccc
Q 003926 638 -NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAV 716 (786)
Q Consensus 638 -~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 716 (786)
...+..+..|++.|||||++..-.|+.++||||+||+..||..|+||+.+..... ..+-. ..-..|..
T Consensus 181 DTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMR------AIFMI-----PT~PPPTF 249 (502)
T KOG0574|consen 181 DTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMR------AIFMI-----PTKPPPTF 249 (502)
T ss_pred hhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccc------eeEec-----cCCCCCCC
Confidence 3334456789999999999998899999999999999999999999997643311 00000 00011121
Q ss_pred cccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 717 NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 717 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
.-+++...++-+++..|+.++|++|-|+-++++|.+.+
T Consensus 250 --~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~Fik 287 (502)
T KOG0574|consen 250 --KKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIK 287 (502)
T ss_pred --CChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhc
Confidence 12445566788999999999999999999999998744
|
|
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-37 Score=341.14 Aligned_cols=255 Identities=15% Similarity=0.219 Sum_probs=195.5
Q ss_pred CCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 478 NFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
.|...+.||+|+||+||+|+. ++++.||||++..... ...+.+.+|++++++++|||||++++++.+ .+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~-------~~ 74 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQD-------KD 74 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEec-------CC
Confidence 577889999999999999985 4689999999975432 224568999999999999999999998865 45
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..|+||||+++|+|.+++... ..+++.....++.|++.||+|||.. +|+||||||+|||++.++.+||+|||++
T Consensus 75 ~~~lv~E~~~gg~L~~~l~~~---~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~ 148 (381)
T cd05626 75 NLYFVMDYIPGGDMMSLLIRM---EVFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLC 148 (381)
T ss_pred EEEEEEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCC
Confidence 789999999999999999753 3588888888999999999999997 9999999999999999999999999986
Q ss_pred ccccccc------------------------------------------------ccccccccccccCccccccCCCCcc
Q 003926 634 LLAENAE------------------------------------------------KVGHVIPYSGSIDPTNSARGKLEEK 665 (786)
Q Consensus 634 ~~~~~~~------------------------------------------------~~~~~~~~~~~~aPe~~~~~~~t~k 665 (786)
+...... ......++..|+|||.+....++.+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~ 228 (381)
T cd05626 149 TGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQL 228 (381)
T ss_pred cccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCc
Confidence 4321000 0012357788999999988889999
Q ss_pred cceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHH--hccCCCCCC
Q 003926 666 IDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVR--CLLKNPAER 743 (786)
Q Consensus 666 sDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~--Cl~~dP~~R 743 (786)
+|||||||++|||+||++||...........+.. .... .. -|.. .... .++.+++.+ |+..+|.+|
T Consensus 229 ~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~----~~~~-~~--~~~~-~~~s----~~~~dli~~ll~~~~~~~~R 296 (381)
T cd05626 229 CDWWSVGVILFEMLVGQPPFLAPTPTETQLKVIN----WENT-LH--IPPQ-VKLS----PEAVDLITKLCCSAEERLGR 296 (381)
T ss_pred cceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHc----cccc-cC--CCCC-CCCC----HHHHHHHHHHccCcccccCC
Confidence 9999999999999999999976543322111110 0000 00 0000 0111 234455555 667777789
Q ss_pred CCHHHHHHHHHHHH
Q 003926 744 PSVEDVLWNLQFAA 757 (786)
Q Consensus 744 Pt~~evl~~l~~~~ 757 (786)
|++.|++.|+||..
T Consensus 297 ~~~~~~l~hp~f~~ 310 (381)
T cd05626 297 NGADDIKAHPFFSE 310 (381)
T ss_pred CCHHHHhcCcccCC
Confidence 99999999999864
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-37 Score=332.70 Aligned_cols=246 Identities=16% Similarity=0.269 Sum_probs=194.7
Q ss_pred CccCCCCCceeEEEEe----cCCcEEEEEEecccCC----CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 483 AFMGEGSQGQMYRGRL----KNGTFVAIRCLKMKKC----HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~----~~g~~vAvK~l~~~~~----~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
+.||+|+||.||+++. .+++.||||+++.... .....+.+|++++++++||||+++++++.. .+.
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~-------~~~ 74 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQT-------GGK 74 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEec-------CCe
Confidence 5799999999999985 3578999999875421 223567899999999999999999998764 456
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.|+||||+++|+|.+++... ..+.+.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~ 148 (323)
T cd05584 75 LYLILEYLSGGELFMHLERE---GIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCK 148 (323)
T ss_pred EEEEEeCCCCchHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCe
Confidence 89999999999999999753 3577888888999999999999997 99999999999999999999999999986
Q ss_pred cccc-ccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccccc
Q 003926 635 LAEN-AEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVD 713 (786)
Q Consensus 635 ~~~~-~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 713 (786)
.... ........++..|+|||.+....++.++|||||||++|||++|++||...+....... .....
T Consensus 149 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~---~~~~~--------- 216 (323)
T cd05584 149 ESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDK---ILKGK--------- 216 (323)
T ss_pred ecccCCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHH---HHcCC---------
Confidence 4322 1222234577889999999888899999999999999999999999976543322111 11110
Q ss_pred ccccccCcHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHHHHHHH
Q 003926 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERP-----SVEDVLWNLQFAA 757 (786)
Q Consensus 714 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~~l~~~~ 757 (786)
..++.. ....+.+++.+||+.||++|| ++.+++.|+|+..
T Consensus 217 ~~~~~~----~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~ 261 (323)
T cd05584 217 LNLPPY----LTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRH 261 (323)
T ss_pred CCCCCC----CCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCC
Confidence 011111 123466888899999999999 8999999998754
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-37 Score=324.62 Aligned_cols=251 Identities=19% Similarity=0.281 Sum_probs=195.0
Q ss_pred cCCCCCceeEEEEec-CCcEEEEEEecccCCC---ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEEEEe
Q 003926 485 MGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH---STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFE 560 (786)
Q Consensus 485 iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~---~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV~E 560 (786)
||+|+||+||++..+ +|+.||||++...... ..+.+..|++++++++|+||+++.+++.. ....++|||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~-------~~~~~lv~e 73 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQT-------KTDLCLVMT 73 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcC-------CCeEEEEEe
Confidence 699999999999854 6899999998754322 23567889999999999999999887654 456899999
Q ss_pred cCCCCChhHHhhcCC-CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccccc
Q 003926 561 YVPNGTLRSWISEGH-AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENA 639 (786)
Q Consensus 561 y~~~GsL~~~l~~~~-~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~ 639 (786)
|+++|+|.+++.... ....+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 74 ~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 150 (280)
T cd05608 74 IMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDG 150 (280)
T ss_pred CCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCC
Confidence 999999998885422 234689999999999999999999997 9999999999999999999999999998654322
Q ss_pred c-ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccccc
Q 003926 640 E-KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNK 718 (786)
Q Consensus 640 ~-~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 718 (786)
. ......++..|+|||......++.++|||||||++|||++|+.||...........+....... . ..
T Consensus 151 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-----~---~~--- 219 (280)
T cd05608 151 QSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILND-----S---VT--- 219 (280)
T ss_pred CccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhccc-----C---CC---
Confidence 2 1223456778999999988899999999999999999999999987543211111111100000 0 00
Q ss_pred cCcHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHHHHHHH
Q 003926 719 ACLDESLKTMMEVCVRCLLKNPAERP-----SVEDVLWNLQFAA 757 (786)
Q Consensus 719 ~~~~~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~~l~~~~ 757 (786)
.+......+.+++.+||+.||++|| +++|+++|+||..
T Consensus 220 -~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~ 262 (280)
T cd05608 220 -YPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRD 262 (280)
T ss_pred -CcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhc
Confidence 1112234566788899999999999 8899999999875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=342.26 Aligned_cols=255 Identities=16% Similarity=0.247 Sum_probs=199.0
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|+..+.||+|+||+||+|+.. +|+.||||+++.... .....+.+|+++++.++||||+++++++.. .
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~-------~ 73 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQD-------E 73 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEc-------C
Confidence 46888999999999999999965 689999999975432 234568899999999999999999998765 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..|+||||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 74 ~~~~lv~E~~~~g~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 147 (364)
T cd05599 74 NYLYLIMEYLPGGDMMTLLMKK---DTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGL 147 (364)
T ss_pred CeEEEEECCCCCcHHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeeccc
Confidence 5789999999999999999753 3589999999999999999999997 999999999999999999999999999
Q ss_pred ccccccccc---------------------------------------cccccccccccCccccccCCCCcccceeehhH
Q 003926 633 PLLAENAEK---------------------------------------VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGL 673 (786)
Q Consensus 633 ~~~~~~~~~---------------------------------------~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGv 673 (786)
+........ .....|+..|+|||.+....++.++|||||||
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~ 227 (364)
T cd05599 148 CTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGV 227 (364)
T ss_pred ceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchh
Confidence 854321100 01134678899999998888999999999999
Q ss_pred HHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCC---HHHHH
Q 003926 674 ILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPS---VEDVL 750 (786)
Q Consensus 674 vl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt---~~evl 750 (786)
++|||++|++||...........+.. .. .....+. .. .....+.+++.+|+. +|.+|++ +.|++
T Consensus 228 il~el~~G~~Pf~~~~~~~~~~~i~~---~~----~~~~~~~---~~--~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll 294 (364)
T cd05599 228 IMYEMLVGYPPFCSDNPQETYRKIIN---WK----ETLQFPD---EV--PLSPEAKDLIKRLCC-EAERRLGNNGVNEIK 294 (364)
T ss_pred HHHHhhcCCCCCCCCCHHHHHHHHHc---CC----CccCCCC---CC--CCCHHHHHHHHHHcc-CHhhcCCCCCHHHHh
Confidence 99999999999976544322211111 00 0000010 00 112245567778886 9999998 99999
Q ss_pred HHHHHHH
Q 003926 751 WNLQFAA 757 (786)
Q Consensus 751 ~~l~~~~ 757 (786)
.|+|+..
T Consensus 295 ~h~~~~~ 301 (364)
T cd05599 295 SHPFFKG 301 (364)
T ss_pred cCCCcCC
Confidence 9999764
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-37 Score=333.06 Aligned_cols=246 Identities=21% Similarity=0.286 Sum_probs=195.8
Q ss_pred CccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCCCCceEEE
Q 003926 483 AFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSSVSRIFL 557 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~~~~~~~L 557 (786)
+.||+|+||.||+|+.+ +++.||||+++... ....+.+..|.+++..+ +||||+++++++.. .+..|+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~-------~~~~~l 73 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQT-------KDRLFF 73 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc-------CCeEEE
Confidence 46899999999999865 58899999987542 22345678899999866 79999999998764 456899
Q ss_pred EEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccc
Q 003926 558 IFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637 (786)
Q Consensus 558 V~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~ 637 (786)
||||+++|+|.+++... ..+++.....++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 74 v~E~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~ 147 (321)
T cd05591 74 VMEYVNGGDLMFQIQRS---RKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGI 147 (321)
T ss_pred EEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecc
Confidence 99999999999998753 3588999999999999999999997 99999999999999999999999999986432
Q ss_pred c-ccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccc
Q 003926 638 N-AEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAV 716 (786)
Q Consensus 638 ~-~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 716 (786)
. ........++..|+|||.+....++.++|||||||++|||+||++||...........+. ... ...|
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~---~~~------~~~p-- 216 (321)
T cd05591 148 LNGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESIL---HDD------VLYP-- 216 (321)
T ss_pred cCCccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHH---cCC------CCCC--
Confidence 2 112223456788999999988889999999999999999999999998665443322211 110 0011
Q ss_pred cccCcHHHHHHHHHHHHHhccCCCCCCC-------CHHHHHHHHHHHH
Q 003926 717 NKACLDESLKTMMEVCVRCLLKNPAERP-------SVEDVLWNLQFAA 757 (786)
Q Consensus 717 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-------t~~evl~~l~~~~ 757 (786)
.. ....+.+++.+||+.||++|| ++.++++|+|+..
T Consensus 217 -~~----~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~ 259 (321)
T cd05591 217 -VW----LSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKE 259 (321)
T ss_pred -CC----CCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCC
Confidence 11 123466788899999999999 9999999998754
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=329.11 Aligned_cols=252 Identities=17% Similarity=0.349 Sum_probs=203.1
Q ss_pred cCCCccCccCCCCCceeEEEEec---CC--cEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK---NG--TFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~---~g--~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
+.....++||+|-||.||+|.+. .| .-||||..+.... ...+.|++|+.+|+.++|||||+++|+|.+
T Consensus 389 e~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e------ 462 (974)
T KOG4257|consen 389 ELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE------ 462 (974)
T ss_pred hhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec------
Confidence 34456789999999999999853 23 3689999887543 446789999999999999999999999985
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
...|+|||.++.|.|+.||... +..|+......++.|+..||+|||+. .+|||||.++|||+...--+|++||
T Consensus 463 --~P~WivmEL~~~GELr~yLq~n--k~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDF 535 (974)
T KOG4257|consen 463 --QPMWIVMELAPLGELREYLQQN--KDSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADF 535 (974)
T ss_pred --cceeEEEecccchhHHHHHHhc--cccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeeccc
Confidence 4689999999999999999864 34788899999999999999999997 9999999999999999999999999
Q ss_pred Cccccccccccccccc--ccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccc
Q 003926 631 NLPLLAENAEKVGHVI--PYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESA 707 (786)
Q Consensus 631 Gl~~~~~~~~~~~~~~--~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (786)
|+++..++...+.... -...||+||.+...++|.++|||=|||.+||++. |..||..-.-.++..
T Consensus 536 GLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~------------ 603 (974)
T KOG4257|consen 536 GLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIG------------ 603 (974)
T ss_pred chhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEE------------
Confidence 9998887655443322 2357999999999999999999999999999987 999986532111100
Q ss_pred ccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 708 RRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 708 ~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
.+...-...+++.++..+..++.+||+.+|.+||.+.|+...+...
T Consensus 604 ---~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv 649 (974)
T KOG4257|consen 604 ---HIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDV 649 (974)
T ss_pred ---EecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHH
Confidence 0001111234455556777899999999999999999998766544
|
|
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-37 Score=323.77 Aligned_cols=262 Identities=17% Similarity=0.245 Sum_probs=204.3
Q ss_pred CCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 479 FDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
|...+.||+|+||+||+|... +++.||+|.+..... .....+.+|++++++++|+||+++.+++.. .+.
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~-------~~~ 74 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYET-------KDA 74 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEec-------CCE
Confidence 556688999999999999864 689999999875432 223457899999999999999999887754 456
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++||||+++|+|.+++.... ...+++.....++.|++.||.|||+. +|+||||||+||++++++.+||+|||++.
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~ 150 (285)
T cd05632 75 LCLVLTIMNGGDLKFHIYNMG-NPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAV 150 (285)
T ss_pred EEEEEEeccCccHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcce
Confidence 899999999999999886532 23689999999999999999999987 99999999999999999999999999986
Q ss_pred ccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccc
Q 003926 635 LAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDP 714 (786)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 714 (786)
............++..|+|||......++.++|||||||++|||++|+.||...........+........ .
T Consensus 151 ~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~--------~ 222 (285)
T cd05632 151 KIPEGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETE--------E 222 (285)
T ss_pred ecCCCCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccc--------c
Confidence 54332222334567889999999888899999999999999999999999976543222222221111111 0
Q ss_pred cccccCcHHHHHHHHHHHHHhccCCCCCCCC-----HHHHHHHHHHHHHhhhhh
Q 003926 715 AVNKACLDESLKTMMEVCVRCLLKNPAERPS-----VEDVLWNLQFAAQVQDAW 763 (786)
Q Consensus 715 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt-----~~evl~~l~~~~~~~~~~ 763 (786)
... ......+.+++.+||+.||++||+ ++|++.|.|+.......+
T Consensus 223 ~~~----~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~~~ 272 (285)
T cd05632 223 VYS----AKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNFKRL 272 (285)
T ss_pred ccC----ccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCCHHHH
Confidence 011 112234567888999999999999 889999999887544444
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=333.52 Aligned_cols=246 Identities=22% Similarity=0.325 Sum_probs=195.8
Q ss_pred CccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCCCCceEEE
Q 003926 483 AFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSSVSRIFL 557 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~~~~~~~L 557 (786)
+.||+|+||.||+|+.+ +++.||||+++... ....+.+.+|..++..+ +||||+++++++.. .+..|+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~-------~~~~~i 73 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQT-------PDRLFF 73 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEc-------CCEEEE
Confidence 36899999999999965 68999999987542 22345678899998876 69999999988764 456899
Q ss_pred EEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccc
Q 003926 558 IFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637 (786)
Q Consensus 558 V~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~ 637 (786)
||||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 74 v~Ey~~~g~L~~~i~~~---~~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~ 147 (320)
T cd05590 74 VMEFVNGGDLMFHIQKS---RRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI 147 (320)
T ss_pred EEcCCCCchHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecC
Confidence 99999999999998753 3588999999999999999999997 99999999999999999999999999976432
Q ss_pred -cccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccc
Q 003926 638 -NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAV 716 (786)
Q Consensus 638 -~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 716 (786)
.........++..|+|||.+....++.++|||||||++|||++|++||...........+. . . ....+
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~---~-~-----~~~~~-- 216 (320)
T cd05590 148 FNGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAIL---N-D-----EVVYP-- 216 (320)
T ss_pred cCCCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHh---c-C-----CCCCC--
Confidence 1222233457788999999988889999999999999999999999997655443322221 1 0 00011
Q ss_pred cccCcHHHHHHHHHHHHHhccCCCCCCCCH------HHHHHHHHHHH
Q 003926 717 NKACLDESLKTMMEVCVRCLLKNPAERPSV------EDVLWNLQFAA 757 (786)
Q Consensus 717 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~------~evl~~l~~~~ 757 (786)
.. ....+.+++.+|++.||++||++ +++++|+||..
T Consensus 217 -~~----~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~ 258 (320)
T cd05590 217 -TW----LSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKE 258 (320)
T ss_pred -CC----CCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCC
Confidence 11 12345678889999999999998 89999999754
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-37 Score=324.74 Aligned_cols=256 Identities=18% Similarity=0.279 Sum_probs=200.9
Q ss_pred CCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC---ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 479 FDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH---STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~---~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
|+..+.||+|+||.||+|... +++.||||.+...... ..+.+.+|+.++++++|+||+++++.+.. .+.
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~-------~~~ 74 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYET-------KDA 74 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEec-------CCE
Confidence 566788999999999999864 6899999998754322 23457899999999999999999998764 456
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++||||+++|+|.+++.... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++|+|||++.
T Consensus 75 ~~lv~e~~~g~~L~~~l~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~ 150 (285)
T cd05630 75 LCLVLTLMNGGDLKFHIYHMG-EAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAV 150 (285)
T ss_pred EEEEEEecCCCcHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeecccee
Confidence 899999999999999986432 23589999999999999999999987 99999999999999999999999999986
Q ss_pred ccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccc
Q 003926 635 LAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDP 714 (786)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 714 (786)
............++..|+|||......++.++|||||||++|||++|+.||................... . .
T Consensus 151 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~----~----~ 222 (285)
T cd05630 151 HVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV----Q----E 222 (285)
T ss_pred ecCCCccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhh----h----h
Confidence 5543333333456788999999988889999999999999999999999997533211111111111000 0 0
Q ss_pred cccccCcHHHHHHHHHHHHHhccCCCCCCCC-----HHHHHHHHHHHH
Q 003926 715 AVNKACLDESLKTMMEVCVRCLLKNPAERPS-----VEDVLWNLQFAA 757 (786)
Q Consensus 715 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt-----~~evl~~l~~~~ 757 (786)
...... ...+.+++.+||+.||++||| +.|+++|.|+.+
T Consensus 223 ~~~~~~----~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~ 266 (285)
T cd05630 223 EYSEKF----SPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQ 266 (285)
T ss_pred hcCccC----CHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhc
Confidence 011111 234667888999999999999 899999999875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-37 Score=333.14 Aligned_cols=249 Identities=20% Similarity=0.331 Sum_probs=196.0
Q ss_pred CCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHHHHHHH---hcCCCCCcceeeeeeeeccccCCC
Q 003926 479 FDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIELI---SKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l---~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
|+..+.||+|+||.||+|... +|+.||||+++.... ...+.+.+|++++ ++++||||+++++++..
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~------- 73 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQT------- 73 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEc-------
Confidence 456789999999999999864 689999999975432 2234566776654 57789999999998764
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
.+..|+||||+++|+|..++++ ..+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 74 ~~~~~lv~E~~~~~~L~~~~~~----~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg 146 (324)
T cd05589 74 EDHVCFVMEYAAGGDLMMHIHT----DVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFG 146 (324)
T ss_pred CCEEEEEEcCCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCccc
Confidence 4578999999999999998864 3589999999999999999999997 99999999999999999999999999
Q ss_pred ccccccc-ccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 632 LPLLAEN-AEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 632 l~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
+++.... ........++..|+|||.+....++.++|||||||++|||++|+.||...........+. ...
T Consensus 147 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~---~~~------ 217 (324)
T cd05589 147 LCKEGMGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIV---NDE------ 217 (324)
T ss_pred CCccCCCCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHH---hCC------
Confidence 9754321 122233457788999999988889999999999999999999999997655433322211 110
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERP-----SVEDVLWNLQFAA 757 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~~l~~~~ 757 (786)
+..+.. ....+.+++.+||+.||++|| ++.++++|+||..
T Consensus 218 ---~~~p~~----~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~ 262 (324)
T cd05589 218 ---VRYPRF----LSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRD 262 (324)
T ss_pred ---CCCCCC----CCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCC
Confidence 001111 123456788899999999999 6899999988754
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-37 Score=317.10 Aligned_cols=265 Identities=18% Similarity=0.338 Sum_probs=196.5
Q ss_pred ccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhc--CCCCCcceeeeeeeeccccCCCCceEEEE
Q 003926 481 TSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISK--LRHRHLVSALGHCFECYFDDSSVSRIFLI 558 (786)
Q Consensus 481 ~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~--l~H~NIv~l~g~~~~~~~~~~~~~~~~LV 558 (786)
..++||+|.||.||||.+. ++.||||++... ..+.|.+|-+|.+- ++|+||++|+++-..+.. . ..+++||
T Consensus 214 l~eli~~Grfg~V~KaqL~-~~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~--~-~~eywLV 286 (534)
T KOG3653|consen 214 LLELIGRGRFGCVWKAQLD-NRLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTA--D-RMEYWLV 286 (534)
T ss_pred hHHHhhcCccceeehhhcc-CceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCc--c-ccceeEE
Confidence 3467999999999999987 489999998754 35678888887775 689999999987544221 1 3478999
Q ss_pred EecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcC------CCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 559 FEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTG------IVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 559 ~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~------~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+||.++|+|.+||.. ..++|....+|+..+++||+|||++ .+|+|+|||||++|||+..|+++.|+|||+
T Consensus 287 t~fh~kGsL~dyL~~----ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGL 362 (534)
T KOG3653|consen 287 TEFHPKGSLCDYLKA----NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGL 362 (534)
T ss_pred eeeccCCcHHHHHHh----ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccce
Confidence 999999999999985 3689999999999999999999975 357899999999999999999999999999
Q ss_pred ccccccccc---cccccccccccCccccccCC-CC-----cccceeehhHHHHHHHhCCCCCCCc-------hhH-H---
Q 003926 633 PLLAENAEK---VGHVIPYSGSIDPTNSARGK-LE-----EKIDIYDFGLILLEIIVGRPLKSRK-------EVD-L--- 692 (786)
Q Consensus 633 ~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~-~t-----~ksDVwSfGvvl~ElltG~~p~~~~-------~~~-~--- 692 (786)
|........ .....||..|||||.+.+.. +. .+.||||.|.|||||+++...++.. ..+ +
T Consensus 363 Al~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~ 442 (534)
T KOG3653|consen 363 ALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGN 442 (534)
T ss_pred eEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcC
Confidence 976654332 22356889999999876532 22 3689999999999999864322100 000 0
Q ss_pred --HHHHHHHHHHhccccccccccccccccCc-HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhhhh
Q 003926 693 --LKNQLQAVVTADESARRSMVDPAVNKACL-DESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDA 762 (786)
Q Consensus 693 --~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~~~ 762 (786)
..+.++..+... +.+ |.++..+. ...+..+.+.+..||..||+.|-|+.=|.++.+...+..+.
T Consensus 443 hPt~e~mq~~VV~k--K~R----P~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~~ 509 (534)
T KOG3653|consen 443 HPTLEEMQELVVRK--KQR----PKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWED 509 (534)
T ss_pred CCCHHHHHHHHHhh--ccC----CCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCCc
Confidence 011122211111 111 22222111 13456677888899999999999999999998866655554
|
|
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-37 Score=323.70 Aligned_cols=253 Identities=24% Similarity=0.404 Sum_probs=198.1
Q ss_pred cCCCccCccCCCCCceeEEEEecC------CcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKN------GTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDD 549 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~------g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~ 549 (786)
++|+..+.||+|+||.||+|.... ...||+|.++.... ....+|.+|++++++++||||+++++++..
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~----- 79 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTK----- 79 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcC-----
Confidence 357778999999999999998642 25799999875432 224579999999999999999999998764
Q ss_pred CCCceEEEEEecCCCCChhHHhhcCCC-------------CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCc
Q 003926 550 SSVSRIFLIFEYVPNGTLRSWISEGHA-------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITD 616 (786)
Q Consensus 550 ~~~~~~~LV~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~N 616 (786)
....+++|||+++|+|.+++..... ...+++...+.++.|++.||.|||+. +++||||||+|
T Consensus 80 --~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~N 154 (283)
T cd05048 80 --EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARN 154 (283)
T ss_pred --CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---Ceeccccccce
Confidence 3458999999999999999975311 14588999999999999999999997 99999999999
Q ss_pred eeecCCCcccccCCCcccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHH
Q 003926 617 ILLDQNLVAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDL 692 (786)
Q Consensus 617 ILld~~~~~kl~DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~ 692 (786)
|++++++.+||+|||++........ .....++..|+|||......++.++|||||||++|||++ |..||.......
T Consensus 155 il~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~ 234 (283)
T cd05048 155 CLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQE 234 (283)
T ss_pred EEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 9999999999999999864422211 112233567999999888889999999999999999998 999987654433
Q ss_pred HHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 693 LKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
+...+.. . ... .. +......+.+++.+||+.||++||+++||+++|.
T Consensus 235 ~~~~i~~----~--~~~-----~~----~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~ 281 (283)
T cd05048 235 VIEMIRS----R--QLL-----PC----PEDCPARVYALMIECWNEIPARRPRFKDIHTRLR 281 (283)
T ss_pred HHHHHHc----C--CcC-----CC----cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHh
Confidence 3322211 0 000 11 1122346778889999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-37 Score=318.99 Aligned_cols=252 Identities=22% Similarity=0.403 Sum_probs=200.6
Q ss_pred hcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
.++|+..+.||+|+||.||+|...+++.||||.++... ...++|.+|++++++++|+||+++++++.. .+..
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~~~ 76 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTL-------EEPI 76 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEec-------CCCe
Confidence 45678889999999999999998778899999987543 346789999999999999999999998764 3568
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
++||||+++|+|.+++.... ...++|..+..++.+++.|+.|||+. +++||||||+||++++++.+||+|||++..
T Consensus 77 ~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~ 152 (261)
T cd05068 77 YIVTELMKYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARV 152 (261)
T ss_pred eeeeecccCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEE
Confidence 99999999999999997643 34689999999999999999999997 999999999999999999999999999865
Q ss_pred cccccccc--cccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 636 AENAEKVG--HVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 636 ~~~~~~~~--~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
........ .......|++||......++.++||||||+++|||+| |+.|+...........+.. . ..
T Consensus 153 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~----~---~~--- 222 (261)
T cd05068 153 IKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQ----G---YR--- 222 (261)
T ss_pred ccCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc----C---CC---
Confidence 53221111 1111246899999888889999999999999999999 9999876543332221110 0 00
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
... +......+.+++.+|++.+|++||++.++.+.++
T Consensus 223 -~~~----~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~ 259 (261)
T cd05068 223 -MPC----PPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLE 259 (261)
T ss_pred -CCC----CCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHh
Confidence 000 1112345778889999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=321.25 Aligned_cols=254 Identities=19% Similarity=0.343 Sum_probs=195.9
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCc----EEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGT----FVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~----~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
++|+..+.||+|+||+||+|.+. +|. .||+|.+...... ...++..|+..+++++|||||+++|++..
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~------ 80 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG------ 80 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC------
Confidence 35667899999999999999864 454 4778877543221 23568889999999999999999998742
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
...++++||+++|+|.+++.... ..++|.....++.|++.||+|||+. +++||||||+||++++++.+||+||
T Consensus 81 --~~~~~i~e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Df 153 (279)
T cd05111 81 --ASLQLVTQLSPLGSLLDHVRQHR--DSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADF 153 (279)
T ss_pred --CccEEEEEeCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCC
Confidence 34689999999999999997532 3689999999999999999999997 8999999999999999999999999
Q ss_pred Ccccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccc
Q 003926 631 NLPLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADES 706 (786)
Q Consensus 631 Gl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (786)
|+++....... .....++..|++||....+.++.++|||||||++|||+| |+.|+.........+.+.. ..
T Consensus 154 g~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~----~~- 228 (279)
T cd05111 154 GVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEK----GE- 228 (279)
T ss_pred ccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC----CC-
Confidence 99865432211 122234457899999988889999999999999999998 9999876554433333211 10
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
....+. .+. ..+.+++.+||..+|++|||+.|+++.+....+
T Consensus 229 ---~~~~~~---~~~----~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 229 ---RLAQPQ---ICT----IDVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred ---cCCCCC---CCC----HHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 011111 122 245678889999999999999999998865443
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-38 Score=314.92 Aligned_cols=272 Identities=19% Similarity=0.321 Sum_probs=205.2
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEeccc--CCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMK--KCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
..|...+.||+|+||.|..|.. ++|+.||||++... .....+...+|+++|+.++|+|||.+.+...... .....
T Consensus 22 ~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~--~~~f~ 99 (359)
T KOG0660|consen 22 RYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPS--RDKFN 99 (359)
T ss_pred ceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccc--ccccc
Confidence 3455568899999999999985 57999999998733 2234577899999999999999999999875411 12346
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..|+|+|+|+. ||...|+.+ +.|+......+..|+.+||.|+|+. +|+|||+||+|+|++.+...||+|||+|
T Consensus 100 DvYiV~elMet-DL~~iik~~---~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGLA 172 (359)
T KOG0660|consen 100 DVYLVFELMET-DLHQIIKSQ---QDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGLA 172 (359)
T ss_pred eeEEehhHHhh-HHHHHHHcC---ccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccce
Confidence 79999999965 999999863 3488888889999999999999998 9999999999999999999999999999
Q ss_pred ccccc---ccccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchh-HHHHHHHHHHHHhccccc
Q 003926 634 LLAEN---AEKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVVTADESAR 708 (786)
Q Consensus 634 ~~~~~---~~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~ 708 (786)
+.... ....+....|..|.|||.+.. ..||...||||.|||+.||++|++.|.+.+. +.+..++.......+...
T Consensus 173 R~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l 252 (359)
T KOG0660|consen 173 RYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDL 252 (359)
T ss_pred eeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHH
Confidence 87753 222344556788999998754 5699999999999999999999999977543 333322222222211111
Q ss_pred ccccc----------cccc----ccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 709 RSMVD----------PAVN----KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 709 ~~~~d----------~~~~----~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
..+-. |..+ ...........+++..++|..||.+|+|++|.++|++++.
T Consensus 253 ~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~ 315 (359)
T KOG0660|consen 253 QKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAP 315 (359)
T ss_pred HHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhh
Confidence 11100 0000 0111122345678888999999999999999999999775
|
|
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-37 Score=350.08 Aligned_cols=253 Identities=15% Similarity=0.204 Sum_probs=200.1
Q ss_pred CCccCccCCCCCceeEEEEec-C-CcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEE
Q 003926 479 FDTSAFMGEGSQGQMYRGRLK-N-GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~-~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~ 556 (786)
|...+.||+|+||.||+|... + +..||+|.+..........+.+|++++++++|||||++++++.. .+..|
T Consensus 69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~-------~~~~~ 141 (478)
T PTZ00267 69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKS-------DDKLL 141 (478)
T ss_pred EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEE-------CCEEE
Confidence 777899999999999999843 4 67889997755443334567889999999999999999999875 45799
Q ss_pred EEEecCCCCChhHHhhcC-CCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 557 LIFEYVPNGTLRSWISEG-HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 557 LV~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
+||||+++|+|.+++... .....+++.....++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 142 lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~ 218 (478)
T PTZ00267 142 LIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQ 218 (478)
T ss_pred EEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCcee
Confidence 999999999999988642 2234688999999999999999999997 999999999999999999999999999875
Q ss_pred cccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 636 AENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 636 ~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
...... .....++..|+|||......++.++|||||||++|||++|+.||.......+...+ .... .
T Consensus 219 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~---~~~~---~---- 288 (478)
T PTZ00267 219 YSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQV---LYGK---Y---- 288 (478)
T ss_pred cCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---HhCC---C----
Confidence 533211 22345778899999998888999999999999999999999999765433322211 1110 0
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
++ .. ......+.+++.+||+.||++||++.|++.+.++.
T Consensus 289 ~~-~~----~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~ 327 (478)
T PTZ00267 289 DP-FP----CPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLK 327 (478)
T ss_pred CC-CC----ccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHH
Confidence 01 01 11123567888899999999999999999887654
|
|
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-37 Score=331.48 Aligned_cols=250 Identities=19% Similarity=0.263 Sum_probs=193.5
Q ss_pred CccCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCCCCceEEE
Q 003926 483 AFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSSVSRIFL 557 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~~~~~~~L 557 (786)
+.||+|+||.||+|+.+ +++.||+|+++.... ...+.+.+|+.++.++ +|||||++++++.. .+..++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~-------~~~~~l 73 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT-------ESRLFF 73 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEe-------CCEEEE
Confidence 46899999999999965 688999999986432 2234578899988876 89999999998765 457899
Q ss_pred EEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccc
Q 003926 558 IFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637 (786)
Q Consensus 558 V~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~ 637 (786)
||||+++|+|..++... ..+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 74 v~E~~~~~~L~~~~~~~---~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~ 147 (329)
T cd05618 74 VIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 147 (329)
T ss_pred EEeCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCcccccc
Confidence 99999999999988653 3589999999999999999999997 99999999999999999999999999986432
Q ss_pred c-ccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCch-----hHHHHHHHHHHHHhcccccccc
Q 003926 638 N-AEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKE-----VDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 638 ~-~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
. ........++..|+|||.+....++.++|||||||++|||++|+.||.... ......++........
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~------ 221 (329)
T cd05618 148 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ------ 221 (329)
T ss_pred CCCCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCC------
Confidence 1 222233457788999999988889999999999999999999999985211 0111111111111110
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCC------HHHHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPS------VEDVLWNLQFAA 757 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt------~~evl~~l~~~~ 757 (786)
..++. .....+.+++.+||+.||++||+ +.|+++|+||..
T Consensus 222 --~~~p~----~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~ 267 (329)
T cd05618 222 --IRIPR----SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 267 (329)
T ss_pred --CCCCC----CCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence 01111 12234667888999999999998 689999998754
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-37 Score=332.77 Aligned_cols=251 Identities=22% Similarity=0.324 Sum_probs=197.7
Q ss_pred CCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCC-CcceeeeeeeeccccCCCC
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHR-HLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~-NIv~l~g~~~~~~~~~~~~ 552 (786)
+|+..+.||+|+||.||+|+.+ +++.||||+++... ....+.+..|++++..++|+ +|+++++++.. .
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-------~ 73 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT-------M 73 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEc-------C
Confidence 4778899999999999999865 57899999997542 23346788999999999765 57777776654 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..|+||||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 74 ~~~~lv~E~~~~g~L~~~~~~~---~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~ 147 (324)
T cd05587 74 DRLYFVMEYVNGGDLMYHIQQV---GKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGM 147 (324)
T ss_pred CEEEEEEcCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCc
Confidence 5689999999999999998753 3588999999999999999999997 999999999999999999999999999
Q ss_pred ccccc-cccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 633 PLLAE-NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 633 ~~~~~-~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
+.... .........++..|+|||.+....++.++|||||||++|||+||++||...........+. ...
T Consensus 148 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~---~~~------- 217 (324)
T cd05587 148 CKENIFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIM---EHN------- 217 (324)
T ss_pred ceecCCCCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH---cCC-------
Confidence 75321 1222233457788999999988889999999999999999999999997655433322211 100
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCH-----HHHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSV-----EDVLWNLQFAA 757 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~-----~evl~~l~~~~ 757 (786)
...+.. ....+.+++.+||++||++|++. .++.+|+|+..
T Consensus 218 --~~~~~~----~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~ 262 (324)
T cd05587 218 --VSYPKS----LSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRR 262 (324)
T ss_pred --CCCCCC----CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCC
Confidence 011111 12356688889999999999986 89999988764
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-37 Score=333.70 Aligned_cols=251 Identities=20% Similarity=0.307 Sum_probs=198.4
Q ss_pred CCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCCCC
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
+|+..+.||+|+||.||+|+.+ +++.||||+++.... ...+.+..|..++..+ +|++|+++++++.. .
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-------~ 73 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQT-------M 73 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEec-------C
Confidence 4778899999999999999865 578999999875432 2234577888888877 58899998887754 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 74 ~~~~lv~E~~~~g~L~~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~ 147 (323)
T cd05616 74 DRLYFVMEYVNGGDLMYQIQQV---GRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGM 147 (323)
T ss_pred CEEEEEEcCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCC
Confidence 5689999999999999998753 3588999999999999999999997 999999999999999999999999999
Q ss_pred ccccc-cccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 633 PLLAE-NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 633 ~~~~~-~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
++... .........++..|+|||.+....++.++|||||||++|||+||++||...+...+...+.. ..
T Consensus 148 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~---~~------- 217 (323)
T cd05616 148 CKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME---HN------- 217 (323)
T ss_pred ceecCCCCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHh---CC-------
Confidence 86432 12222334577889999999888899999999999999999999999987654433322211 10
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCC-----HHHHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPS-----VEDVLWNLQFAA 757 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt-----~~evl~~l~~~~ 757 (786)
...+ .....++.+++.+|+++||++|++ ..++.+|.|+..
T Consensus 218 --~~~p----~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~ 262 (323)
T cd05616 218 --VAYP----KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY 262 (323)
T ss_pred --CCCC----CcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCC
Confidence 0011 112235678888999999999998 488988887654
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-37 Score=330.62 Aligned_cols=247 Identities=19% Similarity=0.319 Sum_probs=194.7
Q ss_pred CccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhc-CCCCCcceeeeeeeeccccCCCCceEEE
Q 003926 483 AFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISK-LRHRHLVSALGHCFECYFDDSSVSRIFL 557 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~-l~H~NIv~l~g~~~~~~~~~~~~~~~~L 557 (786)
+.||+|+||.||+|+.+ +|+.||||+++... ....+.+..|..++.. .+||||+++++++.. .+..|+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-------~~~~~l 73 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQT-------KEHLFF 73 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEe-------CCEEEE
Confidence 46999999999999965 68999999997542 1234567788888875 489999999998764 457899
Q ss_pred EEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccc
Q 003926 558 IFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637 (786)
Q Consensus 558 V~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~ 637 (786)
||||+++|+|.+++... ..+++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 74 v~E~~~~g~L~~~i~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~ 147 (316)
T cd05620 74 VMEFLNGGDLMFHIQDK---GRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENV 147 (316)
T ss_pred EECCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecc
Confidence 99999999999998753 3588899999999999999999997 99999999999999999999999999975322
Q ss_pred c-ccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccc
Q 003926 638 N-AEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAV 716 (786)
Q Consensus 638 ~-~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 716 (786)
. ........++..|+|||.+....++.++|||||||++|||++|+.||...+.......+.. . .+..
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~----~--------~~~~ 215 (316)
T cd05620 148 FGDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRV----D--------TPHY 215 (316)
T ss_pred cCCCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHh----C--------CCCC
Confidence 1 1222334577889999999888899999999999999999999999976554433222211 0 0111
Q ss_pred cccCcHHHHHHHHHHHHHhccCCCCCCCCH-HHHHHHHHHHHH
Q 003926 717 NKACLDESLKTMMEVCVRCLLKNPAERPSV-EDVLWNLQFAAQ 758 (786)
Q Consensus 717 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~-~evl~~l~~~~~ 758 (786)
+... ..++.+++.+||+.||++||++ +++..|+||...
T Consensus 216 ~~~~----~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~ 254 (316)
T cd05620 216 PRWI----TKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTI 254 (316)
T ss_pred CCCC----CHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCC
Confidence 1111 2345678889999999999998 578889987653
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-37 Score=338.01 Aligned_cols=255 Identities=17% Similarity=0.277 Sum_probs=202.3
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|...+.||+|+||+||+|+.. +|+.||||+++.... .....+.+|+++++.++|+||+++++++.+ .
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-------~ 73 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQD-------E 73 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheec-------C
Confidence 36888899999999999999965 689999999975432 334678999999999999999999988764 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..++||||+++|+|.+++.+. ..+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 74 ~~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~ 147 (350)
T cd05573 74 EHLYLVMEYMPGGDLMNLLIRK---DVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGL 147 (350)
T ss_pred CeEEEEEcCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCC
Confidence 5789999999999999999764 3688999999999999999999997 999999999999999999999999999
Q ss_pred cccccccc------------------------------ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCC
Q 003926 633 PLLAENAE------------------------------KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR 682 (786)
Q Consensus 633 ~~~~~~~~------------------------------~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~ 682 (786)
+....... ......++..|+|||.+....++.++|||||||++|||++|+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~ 227 (350)
T cd05573 148 CKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGF 227 (350)
T ss_pred CccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCC
Confidence 86543222 122345678899999998889999999999999999999999
Q ss_pred CCCCCchhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCC-HHHHHHHHHHHH
Q 003926 683 PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPS-VEDVLWNLQFAA 757 (786)
Q Consensus 683 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt-~~evl~~l~~~~ 757 (786)
.||...........+.. .. ....-|... . ....+.+++.+|+. ||++||+ +.|+++|+|+..
T Consensus 228 ~Pf~~~~~~~~~~~i~~---~~----~~~~~p~~~-~----~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~ 290 (350)
T cd05573 228 PPFYSDTLQETYNKIIN---WK----ESLRFPPDP-P----VSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKG 290 (350)
T ss_pred CCCCCCCHHHHHHHHhc---cC----CcccCCCCC-C----CCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCC
Confidence 99976543322211111 00 000001100 0 12356678889997 9999999 999999999764
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=332.76 Aligned_cols=249 Identities=22% Similarity=0.363 Sum_probs=201.5
Q ss_pred ccCccCCCCCceeEEEEec--CC--cEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 481 TSAFMGEGSQGQMYRGRLK--NG--TFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 481 ~~~~iG~G~fg~Vy~~~~~--~g--~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
..++||+|+||+|++|.|. .| ..||||+++..... ...+|++|+.+|-+++|+|+|+|+|+... ...
T Consensus 114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~--------qp~ 185 (1039)
T KOG0199|consen 114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD--------QPA 185 (1039)
T ss_pred HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc--------chh
Confidence 3578999999999999986 33 46899999877654 56789999999999999999999999864 357
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
.+|||.++.|||.+.|++ .....|-......++.|||.||.||... ++|||||..+|+|+-....+||+|||+.+.
T Consensus 186 mMV~ELaplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRa 261 (1039)
T KOG0199|consen 186 MMVFELAPLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRA 261 (1039)
T ss_pred hHHhhhcccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceec
Confidence 899999999999999997 3345677788889999999999999997 999999999999999999999999999876
Q ss_pred cccccccccccc----cccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 636 AENAEKVGHVIP----YSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 636 ~~~~~~~~~~~~----~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
....+.+..+.+ ...|.|||.+..++|+.++|||+|||++|||+| |+.||.+.....+.+.+.. .+ .
T Consensus 262 Lg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~----~e----r 333 (1039)
T KOG0199|consen 262 LGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDA----GE----R 333 (1039)
T ss_pred cCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccc----cc----c
Confidence 654443332222 246889999999999999999999999999999 7889877655444333321 10 0
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
-..+..+.+++.+++.+||..+|++|||+..|.+.+...
T Consensus 334 -------LpRPk~csedIY~imk~cWah~paDRptFsair~~~~l~ 372 (1039)
T KOG0199|consen 334 -------LPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVLA 372 (1039)
T ss_pred -------CCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHHH
Confidence 111233445778899999999999999999998766544
|
|
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-37 Score=329.39 Aligned_cols=268 Identities=15% Similarity=0.272 Sum_probs=203.4
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
++|+..+.||+|+||.||+|... ++..||+|.++.... ....++.+|++++++++||||+++++++.. .+.
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------~~~ 73 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYS-------DGE 73 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee-------CCE
Confidence 36888999999999999999854 688999998875432 223568899999999999999999999875 457
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++||||+++|+|.+++... ..+++.....++.|+++||.|||+. .+++||||||+||+++.++.+||+|||++.
T Consensus 74 ~~lv~ey~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 148 (308)
T cd06615 74 ISICMEHMDGGSLDQVLKKA---GRIPENILGKISIAVLRGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSG 148 (308)
T ss_pred EEEEeeccCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhh--CCEEECCCChHHEEEecCCcEEEccCCCcc
Confidence 89999999999999999753 3588999999999999999999973 279999999999999999999999999985
Q ss_pred ccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccc--cc---
Q 003926 635 LAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESA--RR--- 709 (786)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~--~~--- 709 (786)
...... .....++..|++||...+..++.++|||||||++|||++|+.|+...+.................. ..
T Consensus 149 ~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (308)
T cd06615 149 QLIDSM-ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVS 227 (308)
T ss_pred cccccc-cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCccccc
Confidence 443221 123345678999999877789999999999999999999999986544332222211100000000 00
Q ss_pred --------------------ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 003926 710 --------------------SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760 (786)
Q Consensus 710 --------------------~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~ 760 (786)
.-..+..+. ......+.+++.+||..+|++|||+.||++|+|+.....
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~ 295 (308)
T cd06615 228 GHPPDSPRPMAIFELLDYIVNEPPPKLPS---GAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRAEL 295 (308)
T ss_pred CCCCCccchhhHHHHHHHHhcCCCccCcC---cccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhccc
Confidence 000011100 012235778899999999999999999999999876433
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-37 Score=337.93 Aligned_cols=262 Identities=16% Similarity=0.187 Sum_probs=197.0
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
.++|+..+.||+|+||.||+|+. ++++.||+|... ...+.+|++++++++|||||++++++.. ...
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~-------~~~ 157 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTY-------NKF 157 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEE-------CCe
Confidence 35799999999999999999985 468999999643 2457899999999999999999998764 356
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++|+||+. ++|.+++... ..+++...+.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 158 ~~lv~e~~~-~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~ 230 (391)
T PHA03212 158 TCLILPRYK-TDLYCYLAAK---RNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAAC 230 (391)
T ss_pred eEEEEecCC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCccc
Confidence 899999996 6999888653 3588999999999999999999997 99999999999999999999999999986
Q ss_pred ccccc--cccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCch--------hHHHHHHHHHHHHhc
Q 003926 635 LAENA--EKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKE--------VDLLKNQLQAVVTAD 704 (786)
Q Consensus 635 ~~~~~--~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~--------~~~~~~~~~~~~~~~ 704 (786)
..... .......++..|+|||.+....++.++|||||||++|||+||+.|+.... ...+...+.......
T Consensus 231 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p 310 (391)
T PHA03212 231 FPVDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHP 310 (391)
T ss_pred ccccccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCCh
Confidence 43221 12223467888999999988889999999999999999999997753211 111111111110000
Q ss_pred cccc----------------ccccccccccc--CcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 705 ESAR----------------RSMVDPAVNKA--CLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 705 ~~~~----------------~~~~d~~~~~~--~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.... .....+..... ........+.+++.+||+.||++|||+.|+++|.||..
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~ 381 (391)
T PHA03212 311 NEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQD 381 (391)
T ss_pred hhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhcc
Confidence 0000 00000000000 01123446778899999999999999999999999854
|
|
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-37 Score=323.59 Aligned_cols=264 Identities=19% Similarity=0.305 Sum_probs=195.4
Q ss_pred CCccCccCCCCCceeEEEEe-----cCCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 479 FDTSAFMGEGSQGQMYRGRL-----KNGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~-----~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
|+..+.||+|+||+||++.. .++..||+|.++.... .....|.+|++++++++||||++++++|... ..
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~ 80 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQ-----GG 80 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-----CC
Confidence 36778999999999988653 3578999999876532 2356789999999999999999999987641 23
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
...++||||+++|+|.+++... .+++.++..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 81 ~~~~lv~e~~~~~~l~~~~~~~----~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~ 153 (283)
T cd05080 81 KGLQLIMEYVPLGSLRDYLPKH----KLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGL 153 (283)
T ss_pred ceEEEEecCCCCCCHHHHHHHc----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeeccc
Confidence 4579999999999999999752 489999999999999999999997 999999999999999999999999999
Q ss_pred cccccccccc----ccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHH-Hhcccc
Q 003926 633 PLLAENAEKV----GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVV-TADESA 707 (786)
Q Consensus 633 ~~~~~~~~~~----~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~-~~~~~~ 707 (786)
+......... ....+...|++||......++.++||||||+++|||+||+.|+....... ........ ......
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~ 232 (283)
T cd05080 154 AKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKF-EEMIGPKQGQMTVVR 232 (283)
T ss_pred ccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchh-hhhhcccccccchhh
Confidence 8654332211 11223445899999888889999999999999999999998875432110 00000000 000000
Q ss_pred ccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 708 RRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 708 ~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
..+..+.......+......+.+++.+||+.+|++|||+++|++.++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~ 280 (283)
T cd05080 233 LIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKE 280 (283)
T ss_pred hhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence 001111111111122233567788999999999999999999988864
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-37 Score=328.94 Aligned_cols=246 Identities=22% Similarity=0.361 Sum_probs=194.5
Q ss_pred CccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhc-CCCCCcceeeeeeeeccccCCCCceEEE
Q 003926 483 AFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISK-LRHRHLVSALGHCFECYFDDSSVSRIFL 557 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~-l~H~NIv~l~g~~~~~~~~~~~~~~~~L 557 (786)
+.||+|+||+||+|+.. +++.||||+++... ....+.+..|..+++. ++||||+++++++.+ .+..++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~-------~~~~~l 73 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQT-------KENLFF 73 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEe-------CCEEEE
Confidence 36899999999999965 58899999997642 1234567788888876 499999999998765 456899
Q ss_pred EEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccc
Q 003926 558 IFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637 (786)
Q Consensus 558 V~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~ 637 (786)
||||+++|+|.+++... ..+++.+...++.|+++||.|||+. +|+||||||+|||++.++.+||+|||++....
T Consensus 74 v~ey~~~g~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~ 147 (316)
T cd05619 74 VMEYLNGGDLMFHIQSC---HKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENM 147 (316)
T ss_pred EEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECC
Confidence 99999999999999753 3588999999999999999999997 99999999999999999999999999985432
Q ss_pred c-ccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccc
Q 003926 638 N-AEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAV 716 (786)
Q Consensus 638 ~-~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 716 (786)
. ........++..|+|||.+....++.++|||||||++|||++|+.||...+.......+.. . .+..
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~----~--------~~~~ 215 (316)
T cd05619 148 LGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRM----D--------NPCY 215 (316)
T ss_pred CCCCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh----C--------CCCC
Confidence 1 1122334567889999999888899999999999999999999999976554433322211 0 0111
Q ss_pred cccCcHHHHHHHHHHHHHhccCCCCCCCCHH-HHHHHHHHHH
Q 003926 717 NKACLDESLKTMMEVCVRCLLKNPAERPSVE-DVLWNLQFAA 757 (786)
Q Consensus 717 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~-evl~~l~~~~ 757 (786)
+.. ....+.+++.+||+.||++||++. ++.+|+|+..
T Consensus 216 ~~~----~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~ 253 (316)
T cd05619 216 PRW----LTREAKDILVKLFVREPERRLGVKGDIRQHPFFRE 253 (316)
T ss_pred Ccc----CCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCC
Confidence 111 113456788899999999999997 8888888765
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-37 Score=329.49 Aligned_cols=246 Identities=23% Similarity=0.359 Sum_probs=192.1
Q ss_pred CccCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHHHHHHHhc-CCCCCcceeeeeeeeccccCCCCceEEE
Q 003926 483 AFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIELISK-LRHRHLVSALGHCFECYFDDSSVSRIFL 557 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~-l~H~NIv~l~g~~~~~~~~~~~~~~~~L 557 (786)
+.||+|+||.||+|+.. +++.||||+++.... ...+.+..|..++.. .+||||+++++++.. .+..++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~-------~~~~~l 73 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQT-------KEHLFF 73 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEc-------CCEEEE
Confidence 36899999999999965 588999999975432 234556677777765 489999999988754 457899
Q ss_pred EEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccc
Q 003926 558 IFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637 (786)
Q Consensus 558 V~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~ 637 (786)
||||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 74 v~e~~~gg~L~~~~~~~---~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~ 147 (316)
T cd05592 74 VMEYLNGGDLMFHIQSS---GRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENM 147 (316)
T ss_pred EEcCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECC
Confidence 99999999999998753 3588889999999999999999997 99999999999999999999999999986432
Q ss_pred c-ccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccc
Q 003926 638 N-AEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAV 716 (786)
Q Consensus 638 ~-~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 716 (786)
. ........++..|+|||.+....++.++|||||||++|||++|+.||...+.......+. . . .+..
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~---~-~--------~~~~ 215 (316)
T cd05592 148 NGEGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSIL---N-D--------RPHF 215 (316)
T ss_pred CCCCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHH---c-C--------CCCC
Confidence 2 122233457889999999988889999999999999999999999997655433322211 1 0 0111
Q ss_pred cccCcHHHHHHHHHHHHHhccCCCCCCCCHH-HHHHHHHHHH
Q 003926 717 NKACLDESLKTMMEVCVRCLLKNPAERPSVE-DVLWNLQFAA 757 (786)
Q Consensus 717 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~-evl~~l~~~~ 757 (786)
+... ...+.+++.+||+.||++||++. +++.|.|+..
T Consensus 216 ~~~~----~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~ 253 (316)
T cd05592 216 PRWI----SKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRG 253 (316)
T ss_pred CCCC----CHHHHHHHHHHccCCHHHcCCChHHHHcCcccCC
Confidence 1111 23456788899999999999875 7878887654
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-37 Score=317.82 Aligned_cols=248 Identities=21% Similarity=0.335 Sum_probs=196.0
Q ss_pred CCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEE
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFL 557 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~L 557 (786)
+|...+.||+|+||.||+|...++..||||.++... ....+|.+|++++++++||||++++++|.+ .+..++
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~~~~l 76 (256)
T cd05113 5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTK-------QRPIYI 76 (256)
T ss_pred HeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEcc-------CCCcEE
Confidence 466778999999999999998777789999987543 335679999999999999999999998864 345799
Q ss_pred EEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccc
Q 003926 558 IFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637 (786)
Q Consensus 558 V~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~ 637 (786)
||||+++|+|.+++.... ..+++.+++.++.|++.||+|||+. +++|+||||+||+++.++.+||+|||.++...
T Consensus 77 v~e~~~~~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~ 151 (256)
T cd05113 77 VTEYMSNGCLLNYLREHG--KRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVL 151 (256)
T ss_pred EEEcCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecC
Confidence 999999999999997532 2589999999999999999999987 99999999999999999999999999986543
Q ss_pred ccccc--ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccccccccccc
Q 003926 638 NAEKV--GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMVDP 714 (786)
Q Consensus 638 ~~~~~--~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 714 (786)
..... ....++..|++||......++.++|||||||++|||+| |+.|+...........+. ... +. ..+
T Consensus 152 ~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~---~~~----~~-~~~ 223 (256)
T cd05113 152 DDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVS---QGL----RL-YRP 223 (256)
T ss_pred CCceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHh---cCC----CC-CCC
Confidence 22211 11223356899999887889999999999999999999 999987544332222111 100 00 001
Q ss_pred cccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 003926 715 AVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNL 753 (786)
Q Consensus 715 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l 753 (786)
. .....+.+++.+||+.+|.+||++.++++.+
T Consensus 224 ---~----~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~ 255 (256)
T cd05113 224 ---H----LASEKVYAIMYSCWHEKAEERPTFQQLLSSI 255 (256)
T ss_pred ---C----CCCHHHHHHHHHHcCCCcccCCCHHHHHHhh
Confidence 0 1124567888899999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-37 Score=322.63 Aligned_cols=261 Identities=19% Similarity=0.276 Sum_probs=199.3
Q ss_pred HHHHhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 472 LEEATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 472 l~~~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
++.+++++.....||+|+||.||+|+.. ++..||+|.+........+.+.+|++++++++|+||++++|++..
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------ 76 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSE------ 76 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeecc------
Confidence 4456777777889999999999999854 688999999876654556789999999999999999999998865
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC-CCcccccC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ-NLVAKISS 629 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~-~~~~kl~D 629 (786)
.+..++|+||+++++|.+++.........++..+..++.|+++||+|||+. +|+||||||+||+++. ++.+||+|
T Consensus 77 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~d 152 (268)
T cd06624 77 -NGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISD 152 (268)
T ss_pred -CCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEec
Confidence 456899999999999999997532211227888889999999999999987 9999999999999986 67899999
Q ss_pred CCccccccccc-ccccccccccccCccccccCC--CCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccc
Q 003926 630 YNLPLLAENAE-KVGHVIPYSGSIDPTNSARGK--LEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADES 706 (786)
Q Consensus 630 fGl~~~~~~~~-~~~~~~~~~~~~aPe~~~~~~--~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (786)
||++....... ......++..|++||...... ++.++|||||||++|||++|++|+..........+.... ..
T Consensus 153 fg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~-~~--- 228 (268)
T cd06624 153 FGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGM-FK--- 228 (268)
T ss_pred chhheecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhh-hc---
Confidence 99985442211 112234566899999876543 789999999999999999999998643221111110000 00
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
..+.+. ......+.+++.+||+.+|++|||+.|++.|+|+
T Consensus 229 -----~~~~~~----~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 229 -----IHPEIP----ESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred -----cCCCCC----cccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 011111 1222356788889999999999999999998763
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-37 Score=337.94 Aligned_cols=256 Identities=18% Similarity=0.288 Sum_probs=194.9
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|+..+.||+|+||+||+|+.. +++.||||+++.... .....+.+|+.++.+++|+||+++++.+.+ .
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~-------~ 73 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQD-------K 73 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEec-------C
Confidence 46888999999999999999854 689999999975432 223568889999999999999999998764 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
...|+|||||++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 74 ~~~~lv~E~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGl 147 (363)
T cd05628 74 LNLYLIMEFLPGGDMMTLLMKK---DTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGL 147 (363)
T ss_pred CeEEEEEcCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccC
Confidence 5689999999999999999753 3589999999999999999999997 999999999999999999999999999
Q ss_pred cccccccc------------------------------------ccccccccccccCccccccCCCCcccceeehhHHHH
Q 003926 633 PLLAENAE------------------------------------KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILL 676 (786)
Q Consensus 633 ~~~~~~~~------------------------------------~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ 676 (786)
++...... ......|+..|+|||.+....++.++|||||||++|
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ 227 (363)
T cd05628 148 CTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMY 227 (363)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHH
Confidence 86432110 001235778899999998888999999999999999
Q ss_pred HHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHH--hccCCCCCCCCHHHHHHHHH
Q 003926 677 EIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVR--CLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 677 ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~--Cl~~dP~~RPt~~evl~~l~ 754 (786)
||++|++||...........+.. ... ...+.+.. .. .+ .+.+++.+ |...++..||++.||++|+|
T Consensus 228 ell~G~~Pf~~~~~~~~~~~i~~---~~~---~~~~p~~~--~~-s~---~~~~li~~l~~~~~~r~~r~~~~ei~~hp~ 295 (363)
T cd05628 228 EMLIGYPPFCSETPQETYKKVMN---WKE---TLIFPPEV--PI-SE---KAKDLILRFCCEWEHRIGAPGVEEIKTNPF 295 (363)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHc---CcC---cccCCCcC--CC-CH---HHHHHHHHHcCChhhcCCCCCHHHHhCCCC
Confidence 99999999976544332222111 000 00011111 11 12 23334444 43345556799999999999
Q ss_pred HHH
Q 003926 755 FAA 757 (786)
Q Consensus 755 ~~~ 757 (786)
|..
T Consensus 296 f~~ 298 (363)
T cd05628 296 FEG 298 (363)
T ss_pred CCC
Confidence 764
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-37 Score=320.59 Aligned_cols=254 Identities=23% Similarity=0.410 Sum_probs=203.7
Q ss_pred HhcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
+..+|...+.||+|+||.||+|..+++..||+|.+..........+.+|++++++++|+||+++++++.. .+.
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------~~~ 76 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSV-------GEP 76 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEec-------CCC
Confidence 4456788899999999999999988899999999987655456789999999999999999999998865 356
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++||||+++|+|.+++.... ...+++.++..++.+++.|++|||+. +++||||||+||++++++.+||+|||++.
T Consensus 77 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~ 152 (261)
T cd05148 77 VYIITELMEKGSLLAFLRSPE-GQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLAR 152 (261)
T ss_pred eEEEEeecccCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchh
Confidence 899999999999999997643 34689999999999999999999987 89999999999999999999999999986
Q ss_pred ccccccc-cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 635 LAENAEK-VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 635 ~~~~~~~-~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
....... ......+..|++||......++.++||||||+++|||++ |+.|+...........+.. . ..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~----~--~~---- 222 (261)
T cd05148 153 LIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITA----G--YR---- 222 (261)
T ss_pred hcCCccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHh----C--Cc----
Confidence 5432211 111223456899999888889999999999999999998 8999876543332222211 0 00
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
+... ......+.+++.+||+.||++|||++++++.|+
T Consensus 223 -~~~~----~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~ 259 (261)
T cd05148 223 -MPCP----AKCPQEIYKIMLECWAAEPEDRPSFKALREELD 259 (261)
T ss_pred -CCCC----CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 0011 112235678889999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=324.18 Aligned_cols=256 Identities=24% Similarity=0.363 Sum_probs=196.1
Q ss_pred cCCCccCccCCCCCceeEEEEecC-Cc--EEEEEEecccC-CCChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKN-GT--FVAIRCLKMKK-CHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~-g~--~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~~ 551 (786)
++|+..+.||+|+||.||+|+.++ +. .+|+|.++... ....+.|.+|+++++++ +||||+++++++..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~------- 74 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACEN------- 74 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEcc-------
Confidence 467888999999999999998753 43 47888887432 22346799999999999 79999999998764
Q ss_pred CceEEEEEecCCCCChhHHhhcCCC-------------CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCcee
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHA-------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDIL 618 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NIL 618 (786)
.+..++||||+++|+|.+++++... ...+++...+.++.|++.|++|||+. +|+||||||+||+
T Consensus 75 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil 151 (297)
T cd05089 75 RGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVL 151 (297)
T ss_pred CCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEE
Confidence 3458999999999999999975321 13588999999999999999999987 9999999999999
Q ss_pred ecCCCcccccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHH
Q 003926 619 LDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQL 697 (786)
Q Consensus 619 ld~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~ 697 (786)
+++++.+||+|||++.................|++||......++.++|||||||++|||++ |+.||...........+
T Consensus 152 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~ 231 (297)
T cd05089 152 VGENLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKL 231 (297)
T ss_pred ECCCCeEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 99999999999999854322111111122346899999888889999999999999999998 99998765443322211
Q ss_pred HHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 698 QAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 698 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
. . . ..+..... ....+.+++.+||+.+|.+||++.+|++++....
T Consensus 232 ~---~-~-------~~~~~~~~----~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~ 276 (297)
T cd05089 232 P---Q-G-------YRMEKPRN----CDDEVYELMRQCWRDRPYERPPFAQISVQLSRML 276 (297)
T ss_pred h---c-C-------CCCCCCCC----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 0 0 0 00111111 1235678889999999999999999999986444
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-37 Score=324.17 Aligned_cols=271 Identities=19% Similarity=0.296 Sum_probs=199.6
Q ss_pred CCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC--ChHHHHHHHHHHhcC---CCCCcceeeeeeeeccccCCC
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKL---RHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l---~H~NIv~l~g~~~~~~~~~~~ 551 (786)
.|+..+.||+|+||+||+|+.+ +|+.||+|.++..... ....+.+|+++++++ +||||+++++++..... ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~--~~ 78 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRT--DR 78 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccC--CC
Confidence 3677889999999999999865 6899999998754322 234567788877765 79999999998764211 22
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
....++||||++ ++|.+++.... ...+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 79 ~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg 153 (288)
T cd07863 79 ETKVTLVFEHVD-QDLRTYLDKVP-PPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFG 153 (288)
T ss_pred CceEEEEEcccc-cCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccC
Confidence 356899999998 48999887532 23589999999999999999999997 99999999999999999999999999
Q ss_pred cccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhH-HHHHHHHHHHHhcccccc-
Q 003926 632 LPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVD-LLKNQLQAVVTADESARR- 709 (786)
Q Consensus 632 l~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~~- 709 (786)
++.............++..|+|||.+....++.++|||||||++|||++|++||...... ................+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T cd07863 154 LARIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPR 233 (288)
T ss_pred ccccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcc
Confidence 987654333333345567899999998888999999999999999999999998764432 222222211110000000
Q ss_pred ------ccccccc---cccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 710 ------SMVDPAV---NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 710 ------~~~d~~~---~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
....+.. ...+..+....+.+++.+|++.||++|||+.|++.|+||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 234 DVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred cccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 0000000 001111223456788899999999999999999998874
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-37 Score=318.96 Aligned_cols=251 Identities=21% Similarity=0.357 Sum_probs=199.3
Q ss_pred cCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~ 556 (786)
++|+..+.||+|+||.||+|...++..||+|.+.... ...+.|.+|+.++++++|+||+++++++.. .+..+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~~~~ 77 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTK-------EEPIY 77 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcC-------CCCcE
Confidence 5677889999999999999998888899999986543 235789999999999999999999988754 35589
Q ss_pred EEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccc
Q 003926 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636 (786)
Q Consensus 557 LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~ 636 (786)
+||||+++|+|.++++... ...+++.++..++.|++.||+|||+. +++||||||+||+++.++.+|++|||++...
T Consensus 78 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~ 153 (261)
T cd05072 78 IITEYMAKGSLLDFLKSDE-GGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVI 153 (261)
T ss_pred EEEecCCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceec
Confidence 9999999999999997532 34688999999999999999999997 9999999999999999999999999998655
Q ss_pred cccccc--ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccccccccc
Q 003926 637 ENAEKV--GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMVD 713 (786)
Q Consensus 637 ~~~~~~--~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 713 (786)
...... ....++..|+|||....+.++.++|||||||++|||+| |+.||...........+.. . ..
T Consensus 154 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~----~---~~---- 222 (261)
T cd05072 154 EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQR----G---YR---- 222 (261)
T ss_pred CCCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHc----C---CC----
Confidence 432211 11223456999999888889999999999999999999 9999875443332222211 0 00
Q ss_pred ccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 714 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
...... ....+.+++.+||..+|++||+++++.+.++
T Consensus 223 ~~~~~~----~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 259 (261)
T cd05072 223 MPRMEN----CPDELYDIMKTCWKEKAEERPTFDYLQSVLD 259 (261)
T ss_pred CCCCCC----CCHHHHHHHHHHccCCcccCcCHHHHHHHHh
Confidence 001111 1235678888999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-37 Score=329.93 Aligned_cols=250 Identities=18% Similarity=0.265 Sum_probs=194.7
Q ss_pred CccCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCCCCceEEE
Q 003926 483 AFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSSVSRIFL 557 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~~~~~~~L 557 (786)
+.||+|+||.||+|+.+ +++.||||+++.... ...+.+.+|..++.++ +||||+++++++.. .+..|+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~-------~~~~~l 73 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQT-------ESRLFF 73 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEc-------CCEEEE
Confidence 46899999999999965 689999999986432 2235688999999998 79999999998764 456899
Q ss_pred EEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccc-
Q 003926 558 IFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLA- 636 (786)
Q Consensus 558 V~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~- 636 (786)
||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 74 v~e~~~~g~L~~~~~~~---~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~ 147 (329)
T cd05588 74 VIEFVSGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGI 147 (329)
T ss_pred EEeCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccc
Confidence 99999999999988653 3689999999999999999999997 9999999999999999999999999998642
Q ss_pred ccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchh-----HHHHHHHHHHHHhcccccccc
Q 003926 637 ENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEV-----DLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 637 ~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 711 (786)
..........++..|+|||.+....++.++|||||||++|||+||+.||+.... .....+.........
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~------ 221 (329)
T cd05588 148 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQ------ 221 (329)
T ss_pred cCCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCC------
Confidence 122222334577889999999888899999999999999999999999863211 111111111111110
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCC------HHHHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPS------VEDVLWNLQFAA 757 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt------~~evl~~l~~~~ 757 (786)
..++.. ....+.+++.+||+.||.+||+ +.|+++|+||..
T Consensus 222 --~~~p~~----~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~ 267 (329)
T cd05588 222 --IRIPRS----LSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRN 267 (329)
T ss_pred --CCCCCC----CCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence 011111 1234667888999999999987 789999999854
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=321.83 Aligned_cols=253 Identities=23% Similarity=0.370 Sum_probs=195.7
Q ss_pred cCCCccCccCCCCCceeEEEEe-----cCCcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-----KNGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-----~~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
++|+..+.||+|+||.||+|+. .++..||+|.++..... ....|.+|++++++++||||+++++++..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------ 78 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQ------ 78 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEec------
Confidence 4567788999999999999984 24678999998754322 23578999999999999999999998764
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCC--------------CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCc
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHA--------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITD 616 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~--------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~N 616 (786)
.+..|+||||+++|+|.+++..... ...+++.+.+.++.|+++||.|||+. +++||||||+|
T Consensus 79 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~n 154 (283)
T cd05090 79 -EQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARN 154 (283)
T ss_pred -CCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---Ceehhccccce
Confidence 3568999999999999999853211 23578999999999999999999997 99999999999
Q ss_pred eeecCCCcccccCCCccccccccc---ccccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHH
Q 003926 617 ILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDL 692 (786)
Q Consensus 617 ILld~~~~~kl~DfGl~~~~~~~~---~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~ 692 (786)
|++++++.+|++|||+++...... ......++..|++||......++.++|||||||++|||++ |.+||.......
T Consensus 155 ili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~ 234 (283)
T cd05090 155 ILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQE 234 (283)
T ss_pred EEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 999999999999999986542221 1112223456899999888889999999999999999999 998886544333
Q ss_pred HHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 693 LKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
+...+.. . .. +.....+ ...+.+++.+||+.||++||++.+|++++.
T Consensus 235 ~~~~~~~----~--~~-----~~~~~~~----~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 281 (283)
T cd05090 235 VIEMVRK----R--QL-----LPCSEDC----PPRMYSLMTECWQEGPSRRPRFKDIHTRLR 281 (283)
T ss_pred HHHHHHc----C--Cc-----CCCCCCC----CHHHHHHHHHHcccCcccCcCHHHHHHHhh
Confidence 2222211 0 00 0011112 235667888999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=317.75 Aligned_cols=250 Identities=20% Similarity=0.372 Sum_probs=198.4
Q ss_pred CCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEE
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~ 556 (786)
+|...+.||+|+||.||+|..+ +++.||+|+++... ....+|.+|++++++++|+||++++++|.. .+..+
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~~~~ 78 (263)
T cd05052 7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTR-------EPPFY 78 (263)
T ss_pred HeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcC-------CCCcE
Confidence 4667789999999999999965 58899999987542 335679999999999999999999998864 34679
Q ss_pred EEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccc
Q 003926 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636 (786)
Q Consensus 557 LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~ 636 (786)
+||||+++|+|.+++.... ...+++..++.++.|+++||+|||+. +++||||||+||++++++.+||+|||++...
T Consensus 79 lv~e~~~~~~L~~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~ 154 (263)
T cd05052 79 IITEFMTYGNLLDYLRECN-RQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 154 (263)
T ss_pred EEEEeCCCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCcccccc
Confidence 9999999999999997532 34689999999999999999999987 9999999999999999999999999998654
Q ss_pred ccccccc--cccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccccccccc
Q 003926 637 ENAEKVG--HVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMVD 713 (786)
Q Consensus 637 ~~~~~~~--~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 713 (786)
....... ....+..|++||......++.++|||||||++|||++ |..|+.....+.....+.. . . .
T Consensus 155 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~---~----~----~ 223 (263)
T cd05052 155 TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---G----Y----R 223 (263)
T ss_pred ccceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC---C----C----C
Confidence 3322111 1112346899999888889999999999999999998 9999876554433222111 0 0 0
Q ss_pred ccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 714 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
+.....+ ...+.+++.+||+.+|++||++.|+++.+.
T Consensus 224 ~~~~~~~----~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~ 260 (263)
T cd05052 224 MERPEGC----PPKVYELMRACWQWNPSDRPSFAEIHQAFE 260 (263)
T ss_pred CCCCCCC----CHHHHHHHHHHccCCcccCCCHHHHHHHHH
Confidence 1111112 245678888999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-37 Score=322.91 Aligned_cols=255 Identities=18% Similarity=0.315 Sum_probs=197.2
Q ss_pred HhcCCCccCccCCCCCceeEEEEec------CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccc
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYF 547 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~ 547 (786)
.+++|+..+.||+|+||.||+|..+ ++..||||++..... ....+|.+|+.++++++||||+++++++.+
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~--- 80 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ--- 80 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC---
Confidence 4567889999999999999999753 356899998864322 234579999999999999999999998764
Q ss_pred cCCCCceEEEEEecCCCCChhHHhhcCCC-------CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeec
Q 003926 548 DDSSVSRIFLIFEYVPNGTLRSWISEGHA-------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD 620 (786)
Q Consensus 548 ~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~-------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld 620 (786)
....++||||+++|+|.+++..... ...++|..++.++.|++.||+|||+. +++||||||+||+++
T Consensus 81 ----~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~ 153 (277)
T cd05062 81 ----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVA 153 (277)
T ss_pred ----CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEc
Confidence 3568999999999999999975321 23468899999999999999999997 999999999999999
Q ss_pred CCCcccccCCCccccccccccc---ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHH
Q 003926 621 QNLVAKISSYNLPLLAENAEKV---GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQ 696 (786)
Q Consensus 621 ~~~~~kl~DfGl~~~~~~~~~~---~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~ 696 (786)
+++.+|++|||+++........ ....++..|+|||....+.++.++|||||||++|||++ |.+|+...........
T Consensus 154 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~ 233 (277)
T cd05062 154 EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRF 233 (277)
T ss_pred CCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 9999999999998644221111 11223457999999888889999999999999999999 6888865543332221
Q ss_pred HHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 697 LQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 697 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
+. . . ... .... .....+.+++.+||+.+|++|||+.|++++++
T Consensus 234 ~~---~-~--~~~-----~~~~----~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 234 VM---E-G--GLL-----DKPD----NCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred HH---c-C--CcC-----CCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 11 1 0 000 0111 12235678899999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-37 Score=336.44 Aligned_cols=255 Identities=22% Similarity=0.361 Sum_probs=196.8
Q ss_pred HhcCCCccCccCCCCCceeEEEEec------CCcEEEEEEecccCC-CChHHHHHHHHHHhcCC-CCCcceeeeeeeecc
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLR-HRHLVSALGHCFECY 546 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~-H~NIv~l~g~~~~~~ 546 (786)
..++|...+.||+|+||.||+|+.. .+..||||+++.... ...+.|.+|++++++++ |||||+++|+|.+
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~-- 112 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTK-- 112 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEcc--
Confidence 4567888899999999999999852 234799999975433 23467999999999996 9999999999865
Q ss_pred ccCCCCceEEEEEecCCCCChhHHhhcCCC--------------------------------------------------
Q 003926 547 FDDSSVSRIFLIFEYVPNGTLRSWISEGHA-------------------------------------------------- 576 (786)
Q Consensus 547 ~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~-------------------------------------------------- 576 (786)
.+..|+|||||++|+|.++|+....
T Consensus 113 -----~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (400)
T cd05105 113 -----SGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQ 187 (400)
T ss_pred -----CCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccc
Confidence 3568999999999999999864210
Q ss_pred -------------------------------------------CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCC
Q 003926 577 -------------------------------------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLK 613 (786)
Q Consensus 577 -------------------------------------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk 613 (786)
...+++..++.++.|+++||+|||+. +|+|||||
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dik 264 (400)
T cd05105 188 YVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLA 264 (400)
T ss_pred cchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCC
Confidence 12478889999999999999999997 99999999
Q ss_pred CCceeecCCCcccccCCCcccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCch
Q 003926 614 ITDILLDQNLVAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKE 689 (786)
Q Consensus 614 ~~NILld~~~~~kl~DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~ 689 (786)
|+||+++.++.+||+|||+++....... .....++..|+|||.+....++.++|||||||++|||++ |..|+....
T Consensus 265 p~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~ 344 (400)
T cd05105 265 ARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMI 344 (400)
T ss_pred hHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccc
Confidence 9999999999999999999865432211 112234456999999888889999999999999999997 888886543
Q ss_pred hHH-HHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 690 VDL-LKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 690 ~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
.+. ....+ ... . .+.. +......+.+++.+||+.||++||++.+|.+.+.
T Consensus 345 ~~~~~~~~~----~~~---~----~~~~----~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~ 395 (400)
T cd05105 345 VDSTFYNKI----KSG---Y----RMAK----PDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVE 395 (400)
T ss_pred hhHHHHHHH----hcC---C----CCCC----CccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHH
Confidence 221 11111 110 0 0111 1122345778899999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=318.01 Aligned_cols=251 Identities=22% Similarity=0.377 Sum_probs=197.7
Q ss_pred cCCCccCccCCCCCceeEEEEec----CCcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK----NGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
++|+..+.||+|+||+||+|+++ +...||||.++..... ...+|.+|+.++++++||||+++++++..
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------- 76 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTK------- 76 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEec-------
Confidence 56888899999999999999874 2468999998754332 34679999999999999999999998764
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
.+..++||||+++|+|.+++.... ..+++.+...++.|++.|++|||+. +|+||||||+||++++++.+|++|||
T Consensus 77 ~~~~~iv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg 151 (266)
T cd05033 77 SRPVMIITEYMENGSLDKFLREND--GKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFG 151 (266)
T ss_pred CCceEEEEEcCCCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccc
Confidence 356899999999999999997633 3689999999999999999999997 99999999999999999999999999
Q ss_pred cccccccccc-c--ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccc
Q 003926 632 LPLLAENAEK-V--GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESA 707 (786)
Q Consensus 632 l~~~~~~~~~-~--~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (786)
+++....... . .....+..|++||......++.++||||||+++|||++ |..|+...........+.. .
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~----~--- 224 (266)
T cd05033 152 LSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVED----G--- 224 (266)
T ss_pred hhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHc----C---
Confidence 9865531111 1 11122346899999888889999999999999999998 9999865443332222111 0
Q ss_pred ccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 708 RRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 708 ~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
. ..+. .. .....+.+++.+||+.+|++||++.||++++.
T Consensus 225 ~---~~~~-~~----~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~ 263 (266)
T cd05033 225 Y---RLPP-PM----DCPSALYQLMLDCWQKDRNERPTFSQIVSTLD 263 (266)
T ss_pred C---CCCC-CC----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 0 0000 01 12235678889999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-37 Score=329.72 Aligned_cols=246 Identities=22% Similarity=0.300 Sum_probs=196.5
Q ss_pred CccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCCCCceEEE
Q 003926 483 AFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSSVSRIFL 557 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~~~~~~~L 557 (786)
+.||+|+||+||+|+.+ +++.||||+++... ......+.+|+++++.+ +||||+++++++.. .+..|+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~-------~~~~~l 73 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQT-------KDRLFF 73 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc-------CCEEEE
Confidence 46899999999999865 58899999998543 22345678899999888 79999999998764 457899
Q ss_pred EEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccc
Q 003926 558 IFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637 (786)
Q Consensus 558 V~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~ 637 (786)
||||+++|+|.+++... ..+++.....++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 74 v~e~~~~~~L~~~~~~~---~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 147 (318)
T cd05570 74 VMEYVNGGDLMFHIQRS---GRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGI 147 (318)
T ss_pred EEcCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecC
Confidence 99999999999998753 3589999999999999999999997 99999999999999999999999999985422
Q ss_pred -cccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccc
Q 003926 638 -NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAV 716 (786)
Q Consensus 638 -~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 716 (786)
.........++..|+|||.+....++.++|||||||++|||++|+.||...+.......+. . .. ...
T Consensus 148 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~---~-~~--------~~~ 215 (318)
T cd05570 148 LGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSIL---E-DE--------VRY 215 (318)
T ss_pred cCCCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHH---c-CC--------CCC
Confidence 1112223456778999999988889999999999999999999999997655433322111 0 00 011
Q ss_pred cccCcHHHHHHHHHHHHHhccCCCCCCCCH-----HHHHHHHHHHH
Q 003926 717 NKACLDESLKTMMEVCVRCLLKNPAERPSV-----EDVLWNLQFAA 757 (786)
Q Consensus 717 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~-----~evl~~l~~~~ 757 (786)
+.. ....+.+++.+||+.||++||++ .+++.|.|+..
T Consensus 216 ~~~----~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~ 257 (318)
T cd05570 216 PRW----LSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFRE 257 (318)
T ss_pred CCc----CCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCC
Confidence 111 12356788889999999999999 99999998754
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=320.35 Aligned_cols=251 Identities=18% Similarity=0.283 Sum_probs=192.5
Q ss_pred cCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEEEEe
Q 003926 485 MGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFE 560 (786)
Q Consensus 485 iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV~E 560 (786)
||+|+||.||+++.+ +|+.||+|++..... ...+.+..|++++++++||||+++++++.. ....++|||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~-------~~~~~lv~e 73 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFES-------KTHLCLVMS 73 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEec-------CCeEEEEEe
Confidence 699999999999864 699999999975332 123456779999999999999999887754 456899999
Q ss_pred cCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccccccc
Q 003926 561 YVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE 640 (786)
Q Consensus 561 y~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~ 640 (786)
|+++|+|.+++.... ...+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 74 ~~~g~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~ 149 (277)
T cd05607 74 LMNGGDLKYHIYNVG-ERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK 149 (277)
T ss_pred cCCCCCHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc
Confidence 999999999886532 34589999999999999999999997 99999999999999999999999999986554333
Q ss_pred ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccccccC
Q 003926 641 KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKAC 720 (786)
Q Consensus 641 ~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 720 (786)
......++..|+|||......++.++|||||||++|||++|+.||...........+....... . ... ..
T Consensus 150 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~-----~-~~~--~~-- 219 (277)
T cd05607 150 TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLED-----E-VKF--EH-- 219 (277)
T ss_pred eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcc-----c-ccc--cc--
Confidence 2233456778999999888889999999999999999999999986532211111111100000 0 000 00
Q ss_pred cHHHHHHHHHHHHHhccCCCCCCCCH----HHHHHHHHHHH
Q 003926 721 LDESLKTMMEVCVRCLLKNPAERPSV----EDVLWNLQFAA 757 (786)
Q Consensus 721 ~~~~~~~~~~l~~~Cl~~dP~~RPt~----~evl~~l~~~~ 757 (786)
.....++.+++.+||+.||++||++ .+++.|.||..
T Consensus 220 -~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~ 259 (277)
T cd05607 220 -QNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKT 259 (277)
T ss_pred -ccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcC
Confidence 0112346788889999999999999 55667888754
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-37 Score=330.60 Aligned_cols=257 Identities=21% Similarity=0.356 Sum_probs=197.4
Q ss_pred hcCCCccCccCCCCCceeEEEEec------CCcEEEEEEecccCCC-ChHHHHHHHHHHhcC-CCCCcceeeeeeeeccc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKCH-STRNFMHHIELISKL-RHRHLVSALGHCFECYF 547 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~ 547 (786)
.++|+..+.||+|+||.||+|+.. +++.||+|+++..... ..+.+.+|++++.++ +|+||++++++|...
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~-- 83 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKP-- 83 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecC--
Confidence 346788899999999999999732 3578999998754322 235688999999999 899999999988641
Q ss_pred cCCCCceEEEEEecCCCCChhHHhhcCCC---------------------------------------------------
Q 003926 548 DDSSVSRIFLIFEYVPNGTLRSWISEGHA--------------------------------------------------- 576 (786)
Q Consensus 548 ~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~--------------------------------------------------- 576 (786)
....+++|||+++|+|.+++.....
T Consensus 84 ----~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (337)
T cd05054 84 ----GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEED 159 (337)
T ss_pred ----CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccc
Confidence 3468999999999999999864211
Q ss_pred -------CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccccccc---ccccc
Q 003926 577 -------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEK---VGHVI 646 (786)
Q Consensus 577 -------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~~---~~~~~ 646 (786)
...++|..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++........ .....
T Consensus 160 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~ 236 (337)
T cd05054 160 EEGDELYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDAR 236 (337)
T ss_pred hhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCC
Confidence 12689999999999999999999997 999999999999999999999999999865432211 11223
Q ss_pred ccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhH-HHHHHHHHHHHhccccccccccccccccCcHHH
Q 003926 647 PYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVD-LLKNQLQAVVTADESARRSMVDPAVNKACLDES 724 (786)
Q Consensus 647 ~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 724 (786)
++..|+|||.+....++.++|||||||++|||++ |+.||...... .....+. .. ... .. +...
T Consensus 237 ~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~----~~---~~~----~~----~~~~ 301 (337)
T cd05054 237 LPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLK----EG---TRM----RA----PEYA 301 (337)
T ss_pred CCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHh----cc---CCC----CC----CccC
Confidence 3457999999988899999999999999999998 99998653321 1111111 10 000 00 1112
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 725 LKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 725 ~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
...+.+++.+||+.+|++||++.||++++...
T Consensus 302 ~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~ 333 (337)
T cd05054 302 TPEIYSIMLDCWHNNPEDRPTFSELVEILGDL 333 (337)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 24577889999999999999999999999743
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-37 Score=335.02 Aligned_cols=261 Identities=16% Similarity=0.243 Sum_probs=199.4
Q ss_pred HHHHHhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeeeecc
Q 003926 471 ELEEATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECY 546 (786)
Q Consensus 471 ~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~ 546 (786)
++....++|+..+.||+|+||.||+|+.+ +++.||+|.+..... ...+.+.+|+.+++.++||||+++++++..
T Consensus 37 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~-- 114 (370)
T cd05621 37 KLQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQD-- 114 (370)
T ss_pred hcCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEc--
Confidence 33445678999999999999999999965 688999999865322 234568899999999999999999998764
Q ss_pred ccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCccc
Q 003926 547 FDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAK 626 (786)
Q Consensus 547 ~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~k 626 (786)
.+..|+|||||++|+|.+++... .++......++.|++.||+|||+. +|+||||||+|||+++++.+|
T Consensus 115 -----~~~~~lv~Ey~~gg~L~~~l~~~----~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~k 182 (370)
T cd05621 115 -----DKYLYMVMEYMPGGDLVNLMSNY----DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLK 182 (370)
T ss_pred -----CCEEEEEEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEE
Confidence 45789999999999999999752 478888899999999999999997 999999999999999999999
Q ss_pred ccCCCccccccccc--ccccccccccccCccccccC----CCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHH
Q 003926 627 ISSYNLPLLAENAE--KVGHVIPYSGSIDPTNSARG----KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAV 700 (786)
Q Consensus 627 l~DfGl~~~~~~~~--~~~~~~~~~~~~aPe~~~~~----~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~ 700 (786)
|+|||++....... ......++..|+|||.+... .++.++||||+||++|||++|++||...........+
T Consensus 183 L~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i--- 259 (370)
T cd05621 183 LADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKI--- 259 (370)
T ss_pred EEecccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHH---
Confidence 99999986543221 12244578899999987643 3789999999999999999999999765432221111
Q ss_pred HHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCC--CCCHHHHHHHHHHHH
Q 003926 701 VTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAE--RPSVEDVLWNLQFAA 757 (786)
Q Consensus 701 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~--RPt~~evl~~l~~~~ 757 (786)
.... ....-|. . ......+.+++.+|++.+|.+ ||++.|+++|+|+..
T Consensus 260 ~~~~----~~~~~p~---~--~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~ 309 (370)
T cd05621 260 MDHK----NSLNFPE---D--VEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKN 309 (370)
T ss_pred HhCC----cccCCCC---c--ccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCC
Confidence 1100 0000000 0 011234556777888755543 899999999999865
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-37 Score=332.04 Aligned_cols=255 Identities=15% Similarity=0.250 Sum_probs=195.8
Q ss_pred CCCccCccCCCCCceeEEEEe----cCCcEEEEEEecccC----CCChHHHHHHHHHHhcC-CCCCcceeeeeeeecccc
Q 003926 478 NFDTSAFMGEGSQGQMYRGRL----KNGTFVAIRCLKMKK----CHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFD 548 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~----~~g~~vAvK~l~~~~----~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~ 548 (786)
+|+..+.||+|+||.||+++. .+++.||+|+++... ....+.+.+|+++++++ +|+||+++++++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~---- 76 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQT---- 76 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEec----
Confidence 477889999999999999975 358899999987532 12245688999999999 59999999887654
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCccccc
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKIS 628 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~ 628 (786)
.+..++||||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+
T Consensus 77 ---~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~ 147 (332)
T cd05614 77 ---EAKLHLILDYVSGGEMFTHLYQR---DNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLT 147 (332)
T ss_pred ---CCEEEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEe
Confidence 45689999999999999998753 3588999999999999999999997 99999999999999999999999
Q ss_pred CCCccccccccc--ccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcc
Q 003926 629 SYNLPLLAENAE--KVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADE 705 (786)
Q Consensus 629 DfGl~~~~~~~~--~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 705 (786)
|||+++...... ......++..|+|||.+... .++.++|||||||++|||+||+.||...........+......
T Consensus 148 DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~-- 225 (332)
T cd05614 148 DFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILK-- 225 (332)
T ss_pred eCcCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhc--
Confidence 999986432221 22234577889999988654 4788999999999999999999998643211111111111110
Q ss_pred ccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHHHHHHH
Q 003926 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERP-----SVEDVLWNLQFAA 757 (786)
Q Consensus 706 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~~l~~~~ 757 (786)
.++..... ....+.+++.+||+.||++|| ++.|+++|+|+..
T Consensus 226 ------~~~~~~~~----~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~ 272 (332)
T cd05614 226 ------CDPPFPSF----IGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKG 272 (332)
T ss_pred ------CCCCCCCC----CCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCC
Confidence 01111111 123456788899999999999 8889999998754
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-37 Score=330.27 Aligned_cols=246 Identities=17% Similarity=0.298 Sum_probs=192.1
Q ss_pred CccCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHHHHH-HHhcCCCCCcceeeeeeeeccccCCCCceEEE
Q 003926 483 AFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIE-LISKLRHRHLVSALGHCFECYFDDSSVSRIFL 557 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~-~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~L 557 (786)
+.||+|+||+||+|+.. +|+.||||++..... ...+.+.+|.. +++.++||||+++++++.. .+..++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~-------~~~~~l 73 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT-------ADKLYF 73 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEe-------CCEEEE
Confidence 36899999999999965 699999999975432 22345566655 5688999999999988764 457899
Q ss_pred EEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccc
Q 003926 558 IFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637 (786)
Q Consensus 558 V~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~ 637 (786)
||||+++|+|.+++... ..+++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 74 v~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~ 147 (323)
T cd05575 74 VLDYVNGGELFFHLQRE---RSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGI 147 (323)
T ss_pred EEcCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccc
Confidence 99999999999998753 3588899999999999999999997 99999999999999999999999999986432
Q ss_pred c-ccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccc
Q 003926 638 N-AEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAV 716 (786)
Q Consensus 638 ~-~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 716 (786)
. ........++..|+|||.+....++.++|||||||++|||++|++||...+.......+. ... ....+.
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~---~~~-----~~~~~~- 218 (323)
T cd05575 148 EHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNIL---NKP-----LRLKPN- 218 (323)
T ss_pred cCCCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHH---cCC-----CCCCCC-
Confidence 1 222233457788999999988889999999999999999999999997654433222111 110 001111
Q ss_pred cccCcHHHHHHHHHHHHHhccCCCCCCCCH----HHHHHHHHHHH
Q 003926 717 NKACLDESLKTMMEVCVRCLLKNPAERPSV----EDVLWNLQFAA 757 (786)
Q Consensus 717 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~----~evl~~l~~~~ 757 (786)
....+.+++.+|++.||++||++ .|++.|+|+..
T Consensus 219 -------~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~ 256 (323)
T cd05575 219 -------ISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSS 256 (323)
T ss_pred -------CCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCC
Confidence 12346678889999999999987 68998888653
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=302.55 Aligned_cols=258 Identities=20% Similarity=0.294 Sum_probs=207.3
Q ss_pred hcCCCccCccCCCCCceeEEEE-ecCCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++.|+.-++||+|.|+.||++. .++|+.+|+|.+...+. .+.++..+|+.+-+.++|||||++...+.+ .
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~-------~ 82 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE-------E 82 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcc-------c
Confidence 3456677899999999999997 45799999999875543 356788999999999999999999986654 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCC---CcccccC
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN---LVAKISS 629 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~---~~~kl~D 629 (786)
...|+|+|+|.+|+|..-|-.+ ...+....-....||..+|+|+|.+ +|||||+||+|+|+... --+|++|
T Consensus 83 ~~~ylvFe~m~G~dl~~eIV~R---~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~ 156 (355)
T KOG0033|consen 83 SFHYLVFDLVTGGELFEDIVAR---EFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLAD 156 (355)
T ss_pred ceeEEEEecccchHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecc
Confidence 6789999999999997655432 2356667777889999999999998 99999999999998633 4589999
Q ss_pred CCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 630 YNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 630 fGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
||++.............|+++||+||+.....|+..+|||+.|||||-|+.|.+||.+++...+.+.+........
T Consensus 157 FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~---- 232 (355)
T KOG0033|consen 157 FGLAIEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYP---- 232 (355)
T ss_pred cceEEEeCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCC----
Confidence 9999877665556677899999999999999999999999999999999999999988666555554433222111
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
.| ..+....+..+++.+++..||++|-|+.|.++|+|..++
T Consensus 233 ---~~-----~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r 273 (355)
T KOG0033|consen 233 ---SP-----EWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICNR 273 (355)
T ss_pred ---Cc-----ccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcch
Confidence 11 112223345678889999999999999999999996653
|
|
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=323.10 Aligned_cols=255 Identities=18% Similarity=0.301 Sum_probs=203.4
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
..|+..+.||+|+||.||+|+. .+++.||+|.+........+.+.+|+.++++++|+||+++++++.. ....
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~-------~~~~ 92 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV-------GDEL 92 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEe-------CCEE
Confidence 3577788999999999999985 4689999999987665556789999999999999999999998765 3578
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
++||||+++|+|.+++.+ ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 93 ~lv~e~~~~~~L~~~~~~----~~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~ 165 (296)
T cd06654 93 WVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQ 165 (296)
T ss_pred EEeecccCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchh
Confidence 999999999999999864 2478999999999999999999997 999999999999999999999999999764
Q ss_pred ccccc-ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccc
Q 003926 636 AENAE-KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDP 714 (786)
Q Consensus 636 ~~~~~-~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 714 (786)
..... ......++..|++||......++.++|||||||++|||++|++||........ ..... .. ......
T Consensus 166 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~--~~~~~-~~---~~~~~~-- 237 (296)
T cd06654 166 ITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA--LYLIA-TN---GTPELQ-- 237 (296)
T ss_pred ccccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHh--HHHHh-cC---CCCCCC--
Confidence 43221 12233456789999998888899999999999999999999999975443211 11110 00 000100
Q ss_pred cccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 715 AVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 715 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
.+......+.+++.+||..+|++||++.||+.+.|+...
T Consensus 238 -----~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~ 276 (296)
T cd06654 238 -----NPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIA 276 (296)
T ss_pred -----CccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhcc
Confidence 111223456788889999999999999999999987653
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=333.00 Aligned_cols=272 Identities=16% Similarity=0.188 Sum_probs=199.4
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.++|...+.||+|+||.||+|+.. +|..||||++..... .....+.+|+.+++.++||||+++++++..... ....
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 98 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKS-LEEF 98 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCC-cccc
Confidence 467888999999999999999854 689999999875422 234678899999999999999999998753211 0112
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
...|+||||+++ +|.+.++. .+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg~ 169 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIHM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 169 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHhc-----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCCC
Confidence 357999999975 67666643 378888889999999999999997 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHH-HHHHHHH------------
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL-LKNQLQA------------ 699 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~-~~~~~~~------------ 699 (786)
++............++..|+|||.+....++.++|||||||++|||+||+.||...+... .......
T Consensus 170 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (359)
T cd07876 170 ARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRL 249 (359)
T ss_pred ccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHH
Confidence 865433322333456778999999988889999999999999999999999997543221 1111100
Q ss_pred ------HHHhcccc----ccccccccc-c--ccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 700 ------VVTADESA----RRSMVDPAV-N--KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 700 ------~~~~~~~~----~~~~~d~~~-~--~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
........ ..+...... . ..........+.+++.+||+.||++|||+.|++.|+|+..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 320 (359)
T cd07876 250 QPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV 320 (359)
T ss_pred HHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence 00000000 000000000 0 0000111245678889999999999999999999999764
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=326.76 Aligned_cols=245 Identities=21% Similarity=0.379 Sum_probs=196.9
Q ss_pred CCccCccCCCCCceeEEEE-ecCCcEEEEEEecccCCCC---hHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 479 FDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHS---TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~---~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
|...+.||.|+||.||-|+ .++.++||||++.-...+. ..++++||..|++++|||+|.+.||+.. ...
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLr-------e~T 100 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLR-------EHT 100 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeec-------cch
Confidence 5556889999999999999 5578999999997554333 4678999999999999999999998875 345
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.|||||||- ||-.|++.-. +.++....+..|+.|...||+|||+. +.||||||+.|||+.+.+.+|++|||-+.
T Consensus 101 aWLVMEYCl-GSAsDlleVh--kKplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAs 174 (948)
T KOG0577|consen 101 AWLVMEYCL-GSASDLLEVH--KKPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSAS 174 (948)
T ss_pred HHHHHHHHh-ccHHHHHHHH--hccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchh
Confidence 799999996 5888877532 23688889999999999999999997 89999999999999999999999999987
Q ss_pred ccccccccccccccccccCccccc---cCCCCcccceeehhHHHHHHHhCCCCCCCch-hHHHHHHHHHHHHhccccccc
Q 003926 635 LAENAEKVGHVIPYSGSIDPTNSA---RGKLEEKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~aPe~~~---~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~ 710 (786)
+.... ..+.||++|||||++. .|.|+-|+||||+||++.||...+||.-..+ +..+..+.+. .
T Consensus 175 i~~PA---nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQN----e------ 241 (948)
T KOG0577|consen 175 IMAPA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN----E------ 241 (948)
T ss_pred hcCch---hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhc----C------
Confidence 76544 3467899999999864 4789999999999999999999999965433 2222222111 1
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
.|.+.. .+....+..++..|+++-|.+|||..++++|.+
T Consensus 242 --sPtLqs---~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~f 280 (948)
T KOG0577|consen 242 --SPTLQS---NEWSDYFRNFVDSCLQKIPQERPTSEELLKHRF 280 (948)
T ss_pred --CCCCCC---chhHHHHHHHHHHHHhhCcccCCcHHHHhhcch
Confidence 122222 233445667777999999999999999998876
|
|
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-37 Score=336.59 Aligned_cols=257 Identities=16% Similarity=0.232 Sum_probs=199.9
Q ss_pred HhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
..++|+..+.||+|+||.||+|+.+ ++..||+|++.... ....+.|.+|+.+++.++||||+++++++..
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~------ 114 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQD------ 114 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEec------
Confidence 4567888999999999999999965 68999999997532 1233557899999999999999999987764
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
.+..|+||||+++|+|.+++... .++......++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 115 -~~~~~lv~Ey~~gg~L~~~l~~~----~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~Df 186 (370)
T cd05596 115 -DKYLYMVMEYMPGGDLVNLMSNY----DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADF 186 (370)
T ss_pred -CCEEEEEEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEec
Confidence 45689999999999999998752 467777888999999999999997 9999999999999999999999999
Q ss_pred Cccccccccc--ccccccccccccCccccccC----CCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhc
Q 003926 631 NLPLLAENAE--KVGHVIPYSGSIDPTNSARG----KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704 (786)
Q Consensus 631 Gl~~~~~~~~--~~~~~~~~~~~~aPe~~~~~----~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 704 (786)
|++....... ......++..|+|||.+... .++.++|||||||++|||++|++||...........+ ....
T Consensus 187 G~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i---~~~~ 263 (370)
T cd05596 187 GTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKI---MDHK 263 (370)
T ss_pred cceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHH---HcCC
Confidence 9986543221 12234577889999987543 4789999999999999999999999765543222111 1100
Q ss_pred cccccccccccccccCcHHHHHHHHHHHHHhccCCCCC--CCCHHHHHHHHHHHH
Q 003926 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAE--RPSVEDVLWNLQFAA 757 (786)
Q Consensus 705 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~--RPt~~evl~~l~~~~ 757 (786)
.....|.. ......+.+++.+|++.+|++ ||++.|++.|+|+..
T Consensus 264 ----~~~~~~~~-----~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~ 309 (370)
T cd05596 264 ----NSLTFPDD-----IEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKN 309 (370)
T ss_pred ----CcCCCCCc-----CCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCC
Confidence 00000110 011235667888999999988 999999999998764
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-37 Score=335.33 Aligned_cols=246 Identities=18% Similarity=0.300 Sum_probs=200.7
Q ss_pred ccCccCCCCCceeEEEEe-cC----CcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 481 TSAFMGEGSQGQMYRGRL-KN----GTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 481 ~~~~iG~G~fg~Vy~~~~-~~----g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
..++||.|+||+||||.+ +. ..+||||++..... +...+|+.|+-+|++++|||+++++|+|.. +.
T Consensus 700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~--------s~ 771 (1177)
T KOG1025|consen 700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCML--------ST 771 (1177)
T ss_pred hhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhccc--------ch
Confidence 457899999999999984 44 35799999876543 446889999999999999999999999975 34
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
+.||++|||.|+|.++++..+ ..+.-...+.+..|||+||.|||.. +.|||||.++|||+..--.+||+|||+++
T Consensus 772 ~qlvtq~mP~G~LlDyvr~hr--~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ 846 (1177)
T KOG1025|consen 772 LQLVTQLMPLGCLLDYVREHR--DNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAK 846 (1177)
T ss_pred HHHHHHhcccchHHHHHHHhh--ccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhh
Confidence 789999999999999998743 4678888999999999999999987 99999999999999999999999999998
Q ss_pred ccccccccc---cccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 635 LAENAEKVG---HVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 635 ~~~~~~~~~---~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
......... .......|||-|.+....|+.++|||||||++||++| |..|+++...+++.+.+...- .
T Consensus 847 ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~ge--------R 918 (1177)
T KOG1025|consen 847 LLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGE--------R 918 (1177)
T ss_pred ccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhccc--------c
Confidence 765443221 1122356788899999999999999999999999999 999998877766655443211 1
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
+ .++.-+..++..++.+||..|++.||+++++....-
T Consensus 919 L-------sqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs 955 (1177)
T KOG1025|consen 919 L-------SQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFS 955 (1177)
T ss_pred C-------CCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHH
Confidence 1 123334456777888999999999999999987654
|
|
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-36 Score=321.83 Aligned_cols=255 Identities=21% Similarity=0.370 Sum_probs=199.9
Q ss_pred CCCccCccCCCCCceeEEEEec------CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
+|...+.||+|+||.||+|... ++..||+|.++.......+.|.+|++++++++|+||+++++++..
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------- 78 (291)
T cd05094 6 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGD------- 78 (291)
T ss_pred HeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEcc-------
Confidence 4667789999999999999742 356799999876554445779999999999999999999998864
Q ss_pred CceEEEEEecCCCCChhHHhhcCC-------------CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCcee
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGH-------------AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDIL 618 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~-------------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NIL 618 (786)
.+..++||||+++|+|.+++.... ....++|..++.++.|++.|++|||+. +|+||||||+||+
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil 155 (291)
T cd05094 79 GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCL 155 (291)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEE
Confidence 356899999999999999997532 123589999999999999999999997 9999999999999
Q ss_pred ecCCCcccccCCCcccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHH
Q 003926 619 LDQNLVAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLK 694 (786)
Q Consensus 619 ld~~~~~kl~DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~ 694 (786)
++.++.+||+|||++........ .....++..|+|||......++.++|||||||++|||+| |++|+.........
T Consensus 156 ~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~ 235 (291)
T cd05094 156 VGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVI 235 (291)
T ss_pred EccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 99999999999999864432211 112234567899999888889999999999999999999 99998665433322
Q ss_pred HHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 695 NQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
..+ ... .... .. ...+..+.+++.+||+.+|++||++++|++.+....
T Consensus 236 ~~~----~~~--~~~~-----~~----~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~ 283 (291)
T cd05094 236 ECI----TQG--RVLE-----RP----RVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALG 283 (291)
T ss_pred HHH----hCC--CCCC-----CC----ccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence 211 110 0000 01 112345778999999999999999999999997553
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-37 Score=336.89 Aligned_cols=255 Identities=16% Similarity=0.221 Sum_probs=195.9
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|...+.||+|+||.||+|+. .+|+.||||++..... ...+.+.+|++++++++|||||++++++.+ .
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~-------~ 73 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQD-------A 73 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEc-------C
Confidence 4688889999999999999985 4789999999865421 224568899999999999999999998865 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..|+||||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 74 ~~~~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGl 147 (377)
T cd05629 74 QYLYLIMEFLPGGDLMTMLIKY---DTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGL 147 (377)
T ss_pred CeeEEEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeeccc
Confidence 5789999999999999999753 3578888888999999999999997 999999999999999999999999999
Q ss_pred cccccccc--------------c----------------------------------cccccccccccCccccccCCCCc
Q 003926 633 PLLAENAE--------------K----------------------------------VGHVIPYSGSIDPTNSARGKLEE 664 (786)
Q Consensus 633 ~~~~~~~~--------------~----------------------------------~~~~~~~~~~~aPe~~~~~~~t~ 664 (786)
++...... . .....++..|+|||.+....++.
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 227 (377)
T cd05629 148 STGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQ 227 (377)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCC
Confidence 85221000 0 00134778899999998888999
Q ss_pred ccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCC-
Q 003926 665 KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAER- 743 (786)
Q Consensus 665 ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~R- 743 (786)
++|||||||++|||+||++||...........+.. .. ....-|.. ......+.+++.+|+. +|.+|
T Consensus 228 ~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~---~~----~~~~~p~~-----~~~s~~~~dli~~lL~-~~~~r~ 294 (377)
T cd05629 228 ECDWWSLGAIMFECLIGWPPFCSENSHETYRKIIN---WR----ETLYFPDD-----IHLSVEAEDLIRRLIT-NAENRL 294 (377)
T ss_pred ceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHc---cC----CccCCCCC-----CCCCHHHHHHHHHHhc-CHhhcC
Confidence 99999999999999999999976544322211111 00 00000100 0112345677778997 66665
Q ss_pred --CCHHHHHHHHHHHH
Q 003926 744 --PSVEDVLWNLQFAA 757 (786)
Q Consensus 744 --Pt~~evl~~l~~~~ 757 (786)
+++.|+++|+|+..
T Consensus 295 ~r~~~~~~l~hp~~~~ 310 (377)
T cd05629 295 GRGGAHEIKSHPFFRG 310 (377)
T ss_pred CCCCHHHHhcCCCcCC
Confidence 69999999998763
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=323.42 Aligned_cols=261 Identities=23% Similarity=0.373 Sum_probs=197.5
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCc--EEEEEEecccCC-CChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGT--FVAIRCLKMKKC-HSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~--~vAvK~l~~~~~-~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~ 550 (786)
.++|+..+.||+|+||.||+|+.+ ++. .+|+|+++.... ...+.|.+|++++.++ +|+||+++++++..
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~------ 79 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH------ 79 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECC------
Confidence 356778899999999999999964 454 467887764322 2345789999999999 89999999998864
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCC-------------CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCce
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHA-------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDI 617 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NI 617 (786)
.+..|+||||+++|+|.++++.... ...+++.+++.++.|+++|++|||+. +++||||||+||
T Consensus 80 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Ni 155 (303)
T cd05088 80 -RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNI 155 (303)
T ss_pred -CCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheE
Confidence 3568999999999999999975321 13578999999999999999999987 999999999999
Q ss_pred eecCCCcccccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHH
Q 003926 618 LLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQ 696 (786)
Q Consensus 618 Lld~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~ 696 (786)
|++.++.+||+|||++..............+..|++||......++.++|||||||++|||+| |.+||...........
T Consensus 156 li~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~ 235 (303)
T cd05088 156 LVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK 235 (303)
T ss_pred EecCCCcEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHH
Confidence 999999999999999853321111111122346899999887789999999999999999998 9999865443332221
Q ss_pred HHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhhh
Q 003926 697 LQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQD 761 (786)
Q Consensus 697 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~~ 761 (786)
+. .. ..+.... .....+.+++.+||+.+|++||++.++++++......+.
T Consensus 236 ~~----~~-------~~~~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~ 285 (303)
T cd05088 236 LP----QG-------YRLEKPL----NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 285 (303)
T ss_pred Hh----cC-------CcCCCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhh
Confidence 11 00 0000111 112356788899999999999999999999875544443
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=314.96 Aligned_cols=248 Identities=20% Similarity=0.347 Sum_probs=195.4
Q ss_pred CCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEE
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFL 557 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~L 557 (786)
+|...+.||+|+||.||+|..+++..+|+|.+.... ....+|.+|++++++++|+||+++++++.. .+..++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------~~~~~l 76 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTK-------QRPIFI 76 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcC-------CCceEE
Confidence 466778999999999999998877789999986433 235679999999999999999999998754 346899
Q ss_pred EEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccc
Q 003926 558 IFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637 (786)
Q Consensus 558 V~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~ 637 (786)
||||+++|+|.+++.... ..++|...+.++.|++.|++|||+. +++||||||+||+++.++.+|++|||+++...
T Consensus 77 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~ 151 (256)
T cd05059 77 VTEYMANGCLLNYLRERK--GKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVL 151 (256)
T ss_pred EEecCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceecc
Confidence 999999999999997532 2689999999999999999999997 89999999999999999999999999986543
Q ss_pred cccccc--cccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccccccccccc
Q 003926 638 NAEKVG--HVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMVDP 714 (786)
Q Consensus 638 ~~~~~~--~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 714 (786)
...... .......|++||......++.++|||||||++|||+| |+.|+...........+.. . ...
T Consensus 152 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~----~-------~~~ 220 (256)
T cd05059 152 DDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSA----G-------YRL 220 (256)
T ss_pred cccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHc----C-------CcC
Confidence 221111 1112246899999888889999999999999999999 7899875443322221110 0 001
Q ss_pred cccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 003926 715 AVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNL 753 (786)
Q Consensus 715 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l 753 (786)
..... ....+.+++.+||+.+|++|||+.|+++.+
T Consensus 221 ~~~~~----~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 221 YRPKL----APTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CCCCC----CCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 11111 223577888999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-37 Score=333.41 Aligned_cols=256 Identities=17% Similarity=0.237 Sum_probs=199.4
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|+..+.||+|+||+||+|+.. +|+.||||+++.... ...+.+.+|+.+++.++|+||+++++++.. .
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~-------~ 73 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQD-------K 73 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEec-------C
Confidence 36888899999999999999854 689999999986532 234568899999999999999999988764 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..++||||+++|+|.+++.... ..+++.....++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 74 ~~~~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~ 148 (330)
T cd05601 74 DNLYLVMEYQPGGDLLSLLNRYE--DQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGS 148 (330)
T ss_pred CeEEEEECCCCCCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCC
Confidence 56899999999999999997642 3689999999999999999999997 999999999999999999999999999
Q ss_pred ccccccccc--cccccccccccCccccc------cCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhc
Q 003926 633 PLLAENAEK--VGHVIPYSGSIDPTNSA------RGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704 (786)
Q Consensus 633 ~~~~~~~~~--~~~~~~~~~~~aPe~~~------~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 704 (786)
+........ .....++..|+|||.+. ...++.++|||||||++|||++|+.||...........+ ....
T Consensus 149 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i---~~~~ 225 (330)
T cd05601 149 AARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNI---MNFQ 225 (330)
T ss_pred CeECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHH---HcCC
Confidence 865433221 12235677899999876 456789999999999999999999999765432221111 1100
Q ss_pred cccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 705 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
..... |.. ......+.+++..|++ +|++||++.+++.|+|+..
T Consensus 226 --~~~~~--~~~-----~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~ 268 (330)
T cd05601 226 --RFLKF--PED-----PKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSK 268 (330)
T ss_pred --CccCC--CCC-----CCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCC
Confidence 00000 100 0112345677788997 9999999999999999764
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-37 Score=331.47 Aligned_cols=245 Identities=19% Similarity=0.268 Sum_probs=194.8
Q ss_pred CccCCCCCceeEEEEe----cCCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEE
Q 003926 483 AFMGEGSQGQMYRGRL----KNGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~----~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~ 556 (786)
+.||+|+||.||+++. .+|+.||+|+++.... .....+.+|++++++++||||+++++++.. .+..|
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-------~~~~~ 74 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQT-------EGKLY 74 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEc-------CCEEE
Confidence 5799999999999874 3589999999975432 234567889999999999999999998764 45689
Q ss_pred EEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccc
Q 003926 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636 (786)
Q Consensus 557 LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~ 636 (786)
+||||+++|+|.+++.+. ..+++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 75 lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~ 148 (318)
T cd05582 75 LILDFLRGGDLFTRLSKE---VMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKES 148 (318)
T ss_pred EEEcCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCccc
Confidence 999999999999999753 3589999999999999999999997 9999999999999999999999999998654
Q ss_pred ccc-cccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccccccc
Q 003926 637 ENA-EKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPA 715 (786)
Q Consensus 637 ~~~-~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 715 (786)
... .......++..|+|||......++.++|||||||++|||+||+.||...........+. ... . .
T Consensus 149 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~---~~~----~-----~ 216 (318)
T cd05582 149 IDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMIL---KAK----L-----G 216 (318)
T ss_pred CCCCCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHH---cCC----C-----C
Confidence 322 22233456778999999988889999999999999999999999997654433222111 100 0 0
Q ss_pred ccccCcHHHHHHHHHHHHHhccCCCCCCCC-----HHHHHHHHHHH
Q 003926 716 VNKACLDESLKTMMEVCVRCLLKNPAERPS-----VEDVLWNLQFA 756 (786)
Q Consensus 716 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt-----~~evl~~l~~~ 756 (786)
++. .....+.+++.+||+.||++||+ +.+++.|.|+.
T Consensus 217 ~p~----~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~ 258 (318)
T cd05582 217 MPQ----FLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFS 258 (318)
T ss_pred CCC----CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcC
Confidence 111 11234567888999999999999 67788888764
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=333.70 Aligned_cols=271 Identities=17% Similarity=0.188 Sum_probs=201.0
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.++|...+.||+|+||.||+|+.. .++.||||++..... ...+.+.+|+.+++.++||||+++++++..... ....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~-~~~~ 101 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKS-LEEF 101 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccc-cccc
Confidence 467888999999999999999854 688999999875432 234678899999999999999999997753211 0112
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
...|+||||+++ +|.+++.. .+++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~ 172 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 172 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHHh-----cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCCC
Confidence 457999999975 78777753 478889999999999999999997 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHH-HHHHHHHHHhcc------
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLL-KNQLQAVVTADE------ 705 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~-~~~~~~~~~~~~------ 705 (786)
++............++..|+|||.+....++.++|||||||++|||++|+.||...+.... ...+........
T Consensus 173 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (364)
T cd07875 173 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL 252 (364)
T ss_pred ccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhh
Confidence 8765433333344567889999999888899999999999999999999999976543221 111110000000
Q ss_pred --------cccccc-------cccccc----ccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 706 --------SARRSM-------VDPAVN----KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 706 --------~~~~~~-------~d~~~~----~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
...... ..+... ..........+.+++.+|++.||++|||+.|+++|+|+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~ 322 (364)
T cd07875 253 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322 (364)
T ss_pred hHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccc
Confidence 000000 000000 000011224567889999999999999999999999975
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=326.08 Aligned_cols=269 Identities=16% Similarity=0.285 Sum_probs=200.7
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
++|...+.||+|+||.||+|+.+ +++.||+|+++.... .....+.+|++++++++||||+++++++.. .+.
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------~~~ 78 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHT-------DKS 78 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEee-------CCe
Confidence 45778899999999999999865 688999999875543 234568899999999999999999998865 456
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++||||+++ +|.+++.... ..+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 79 ~~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~ 152 (309)
T cd07872 79 LTLVFEYLDK-DLKQYMDDCG--NIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLAR 152 (309)
T ss_pred EEEEEeCCCC-CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccce
Confidence 8999999985 8988886532 3578899999999999999999997 99999999999999999999999999986
Q ss_pred cccccc-ccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcc-cccccc
Q 003926 635 LAENAE-KVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADE-SARRSM 711 (786)
Q Consensus 635 ~~~~~~-~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 711 (786)
...... ......++..|+|||.+.. ..++.++|||||||++|||+||++||...........+........ ..+..+
T Consensus 153 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (309)
T cd07872 153 AKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGI 232 (309)
T ss_pred ecCCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhh
Confidence 432221 1223345678999998754 4589999999999999999999999976544332222221111100 000000
Q ss_pred c------c---ccccc----cCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 712 V------D---PAVNK----ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 712 ~------d---~~~~~----~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
. + +.... .........+.+++.+|++.||.+|||+.|+++|+|+...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~ 292 (309)
T cd07872 233 SSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSL 292 (309)
T ss_pred cchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhc
Confidence 0 0 00000 0001122356788899999999999999999999998753
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-37 Score=346.67 Aligned_cols=266 Identities=16% Similarity=0.234 Sum_probs=205.2
Q ss_pred HHhcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccC-
Q 003926 474 EATNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDD- 549 (786)
Q Consensus 474 ~~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~- 549 (786)
...++|...+.||+|+||+||+|+. .+|+.||||++...... ....+.+|+.++..++|+||+++.+.+.......
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 3456888999999999999999985 57999999998765332 2456889999999999999999887664321110
Q ss_pred CCCceEEEEEecCCCCChhHHhhcCC-CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCccccc
Q 003926 550 SSVSRIFLIFEYVPNGTLRSWISEGH-AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKIS 628 (786)
Q Consensus 550 ~~~~~~~LV~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~ 628 (786)
......++||||+++|+|.+++.... ....+++.....++.|++.||.|||+. +|+||||||+|||++.++.+||+
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL~ 185 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKLG 185 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEEE
Confidence 11124689999999999999997532 234688999999999999999999997 99999999999999999999999
Q ss_pred CCCcccccccc---cccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcc
Q 003926 629 SYNLPLLAENA---EKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADE 705 (786)
Q Consensus 629 DfGl~~~~~~~---~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 705 (786)
|||+++..... .......++..|+|||.+....++.++|||||||++|||++|++||........... .....
T Consensus 186 DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~---~~~~~- 261 (496)
T PTZ00283 186 DFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHK---TLAGR- 261 (496)
T ss_pred ecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH---HhcCC-
Confidence 99998654321 112234577889999999888899999999999999999999999976554332211 11110
Q ss_pred ccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 706 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
. ++ .+. .....+.+++.+||+.||++||++.+++.|+++..
T Consensus 262 --~----~~-~~~----~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~ 302 (496)
T PTZ00283 262 --Y----DP-LPP----SISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKL 302 (496)
T ss_pred --C----CC-CCC----CCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHH
Confidence 0 11 111 12235678888999999999999999999887554
|
|
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=318.23 Aligned_cols=256 Identities=20% Similarity=0.363 Sum_probs=194.1
Q ss_pred CccCccCCCCCceeEEEEecC-Cc--EEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 480 DTSAFMGEGSQGQMYRGRLKN-GT--FVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 480 ~~~~~iG~G~fg~Vy~~~~~~-g~--~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
...+.||+|+||.||+|+..+ +. .||+|.++.... ...+.|.+|++++++++|+||++++++|...... .....
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~-~~~~~ 80 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVES-EGYPS 80 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcc-cCCCC
Confidence 456889999999999999754 33 689998875432 2346789999999999999999999988643211 12335
Q ss_pred EEEEEecCCCCChhHHhhcCC---CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 555 IFLIFEYVPNGTLRSWISEGH---AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~---~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
.++||||+++|+|.+++.... ....+++.....++.|++.||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCC
Confidence 789999999999999875321 223589999999999999999999997 99999999999999999999999999
Q ss_pred ccccccccccc---ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccc
Q 003926 632 LPLLAENAEKV---GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESA 707 (786)
Q Consensus 632 l~~~~~~~~~~---~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (786)
+++........ .....+..|++||......++.++||||||+++|||++ |++||...........+. ...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~----~~~-- 231 (272)
T cd05075 158 LSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLR----QGN-- 231 (272)
T ss_pred cccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH----cCC--
Confidence 98654322211 11123456899999888889999999999999999999 788987544332222111 110
Q ss_pred ccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 708 RRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 708 ~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
. +.....+ ...+.+++.+||+.||++|||+.|+++++.
T Consensus 232 ~-----~~~~~~~----~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 269 (272)
T cd05075 232 R-----LKQPPDC----LDGLYSLMSSCWLLNPKDRPSFETLRCELE 269 (272)
T ss_pred C-----CCCCCCC----CHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 0 0001111 234678889999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=320.06 Aligned_cols=262 Identities=18% Similarity=0.324 Sum_probs=200.8
Q ss_pred HHhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCCC
Q 003926 474 EATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 474 ~~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~~ 551 (786)
.+++.|+..+.||+|+||.||+|... +++.||+|++.... .....+.+|+.+++++ +|+||+++++++...... ..
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~-~~ 80 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP-GM 80 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCC-CC
Confidence 35667888899999999999999864 68899999987543 3456789999999998 799999999998652211 11
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
....|+||||+++|+|.+++.... ...+++.....++.|++.|++|||+. +|+||||||+||++++++.+||+|||
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Dfg 156 (272)
T cd06637 81 DDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFG 156 (272)
T ss_pred CcEEEEEEEcCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccCC
Confidence 246899999999999999987532 34689999999999999999999997 99999999999999999999999999
Q ss_pred ccccccccc-ccccccccccccCccccc-----cCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcc
Q 003926 632 LPLLAENAE-KVGHVIPYSGSIDPTNSA-----RGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADE 705 (786)
Q Consensus 632 l~~~~~~~~-~~~~~~~~~~~~aPe~~~-----~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 705 (786)
++....... ......++..|+|||.+. ...++.++|||||||++|||++|+.|+............ ..
T Consensus 157 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~------~~ 230 (272)
T cd06637 157 VSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI------PR 230 (272)
T ss_pred CceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHH------hc
Confidence 986543221 222345667899999875 335888999999999999999999998654322111100 00
Q ss_pred ccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 706 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
.......+. .....+.+++.+||..+|.+|||+.||++|.||
T Consensus 231 ~~~~~~~~~--------~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 231 NPAPRLKSK--------KWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred CCCCCCCCC--------CcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 001111111 112356788889999999999999999998874
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-36 Score=319.20 Aligned_cols=253 Identities=21% Similarity=0.387 Sum_probs=198.1
Q ss_pred cCCCccCccCCCCCceeEEEEec------CCcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFDD 549 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~ 549 (786)
++|...+.||+|+||.||+|... ++..||||.++..... ..+.|.+|++++++++|+||+++++++..
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----- 79 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTE----- 79 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEec-----
Confidence 45677789999999999999863 2578999998765443 35689999999999999999999998875
Q ss_pred CCCceEEEEEecCCCCChhHHhhcCC-----------CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCcee
Q 003926 550 SSVSRIFLIFEYVPNGTLRSWISEGH-----------AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDIL 618 (786)
Q Consensus 550 ~~~~~~~LV~Ey~~~GsL~~~l~~~~-----------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NIL 618 (786)
....++||||+++|+|.+++.... ....+++.+...++.|++.|++|||+. +++||||||+||+
T Consensus 80 --~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nil 154 (280)
T cd05049 80 --GDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCL 154 (280)
T ss_pred --CCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEE
Confidence 356899999999999999997532 123578999999999999999999997 9999999999999
Q ss_pred ecCCCcccccCCCcccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHH
Q 003926 619 LDQNLVAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLK 694 (786)
Q Consensus 619 ld~~~~~kl~DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~ 694 (786)
++.++.+||+|||++........ ......+..|+|||....+.++.++|||||||++|||++ |+.||.........
T Consensus 155 i~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~ 234 (280)
T cd05049 155 VGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVI 234 (280)
T ss_pred EcCCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHH
Confidence 99999999999999864322111 112223456899999988889999999999999999999 99998654443322
Q ss_pred HHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 695 NQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
..+. .. ... .... .....+.+++.+||+.||++||++.||++.+.
T Consensus 235 ~~~~----~~--~~~-----~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 235 ECIT----QG--RLL-----QRPR----TCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred HHHH----cC--CcC-----CCCC----CCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 2211 00 000 0011 12235678889999999999999999998773
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=336.14 Aligned_cols=254 Identities=15% Similarity=0.223 Sum_probs=193.4
Q ss_pred CCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 478 NFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
.|+..+.||+|+||+||+|+. .+++.||||++..... ...+.+.+|++++++++|+|||++++++.. .+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~-------~~ 74 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQD-------KD 74 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEe-------CC
Confidence 477889999999999999985 4689999999975432 224568899999999999999999998865 45
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..|+|||||++|+|.+++.+. ..++......++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 75 ~~~lv~E~~~gg~L~~~l~~~---~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla 148 (382)
T cd05625 75 NLYFVMDYIPGGDMMSLLIRM---GIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLC 148 (382)
T ss_pred EEEEEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCC
Confidence 789999999999999999753 3578888888999999999999997 9999999999999999999999999996
Q ss_pred cccccc------------------------------------------------cccccccccccccCccccccCCCCcc
Q 003926 634 LLAENA------------------------------------------------EKVGHVIPYSGSIDPTNSARGKLEEK 665 (786)
Q Consensus 634 ~~~~~~------------------------------------------------~~~~~~~~~~~~~aPe~~~~~~~t~k 665 (786)
...... .......++..|+|||.+....++.+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~ 228 (382)
T cd05625 149 TGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQL 228 (382)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCe
Confidence 421100 00012346788999999988889999
Q ss_pred cceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCC
Q 003926 666 IDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPS 745 (786)
Q Consensus 666 sDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt 745 (786)
+|||||||++|||++|++||...........+. ... .....|.. ... ...+.+++.+++ .+|++|++
T Consensus 229 ~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~---~~~----~~~~~p~~-~~~----s~~~~~li~~l~-~~p~~R~~ 295 (382)
T cd05625 229 CDWWSVGVILYEMLVGQPPFLAQTPLETQMKVI---NWQ----TSLHIPPQ-AKL----SPEASDLIIKLC-RGPEDRLG 295 (382)
T ss_pred eeEEechHHHHHHHhCCCCCCCCCHHHHHHHHH---ccC----CCcCCCCc-ccC----CHHHHHHHHHHc-cCHhHcCC
Confidence 999999999999999999997654322211111 000 00000100 011 123445555544 59999987
Q ss_pred ---HHHHHHHHHHHH
Q 003926 746 ---VEDVLWNLQFAA 757 (786)
Q Consensus 746 ---~~evl~~l~~~~ 757 (786)
+.|+++|+||..
T Consensus 296 ~~~~~ei~~hp~f~~ 310 (382)
T cd05625 296 KNGADEIKAHPFFKT 310 (382)
T ss_pred CCCHHHHhcCCCcCC
Confidence 999999999764
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-36 Score=320.36 Aligned_cols=256 Identities=21% Similarity=0.386 Sum_probs=199.2
Q ss_pred cCCCccCccCCCCCceeEEEEec------CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
++|...+.||+|+||.||++... ++..+|+|.+........+.|.+|++++++++||||++++++|..
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 78 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVE------ 78 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec------
Confidence 46778899999999999999742 356799999876544445679999999999999999999999865
Q ss_pred CCceEEEEEecCCCCChhHHhhcCC----------CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeec
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGH----------AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD 620 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~----------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld 620 (786)
.+..++||||+++|+|.+++.... ....+++.+++.++.|++.||+|||+. +++||||||+||+++
T Consensus 79 -~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~ 154 (288)
T cd05093 79 -GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVG 154 (288)
T ss_pred -CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEc
Confidence 356899999999999999997432 123489999999999999999999987 999999999999999
Q ss_pred CCCcccccCCCcccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHH
Q 003926 621 QNLVAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQ 696 (786)
Q Consensus 621 ~~~~~kl~DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~ 696 (786)
+++.+||+|||++........ .....++..|+|||......++.++|||||||++|||+| |++||...........
T Consensus 155 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~ 234 (288)
T cd05093 155 ENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIEC 234 (288)
T ss_pred cCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 999999999999864422211 111223457899999888889999999999999999999 8999876543332221
Q ss_pred HHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 697 LQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 697 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
+. . . ... .....+ ...+.+++.+||+.||.+|||+.||+..++...
T Consensus 235 i~---~-~--~~~-----~~~~~~----~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~ 280 (288)
T cd05093 235 IT---Q-G--RVL-----QRPRTC----PKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLA 280 (288)
T ss_pred HH---c-C--CcC-----CCCCCC----CHHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence 11 1 0 000 011111 235778999999999999999999998886443
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-37 Score=330.07 Aligned_cols=247 Identities=17% Similarity=0.279 Sum_probs=192.2
Q ss_pred CccCCCCCceeEEEEe-cCCcEEEEEEecccCC---CChHHHHHHHH-HHhcCCCCCcceeeeeeeeccccCCCCceEEE
Q 003926 483 AFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC---HSTRNFMHHIE-LISKLRHRHLVSALGHCFECYFDDSSVSRIFL 557 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~f~~E~~-~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~L 557 (786)
+.||+|+||+||+|+. .+|+.||||++..... .....+.+|.. +++.++||||+++++++.. .+..|+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~-------~~~~~l 73 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT-------TEKLYF 73 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEec-------CCEEEE
Confidence 4689999999999985 4689999999975422 22345666665 5778999999999988764 457899
Q ss_pred EEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccc
Q 003926 558 IFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637 (786)
Q Consensus 558 V~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~ 637 (786)
||||+++|+|..++... ..+++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 74 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~ 147 (325)
T cd05604 74 VLDFVNGGELFFHLQRE---RSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGI 147 (325)
T ss_pred EEcCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCC
Confidence 99999999999988753 3588999999999999999999997 99999999999999999999999999986432
Q ss_pred -cccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccc
Q 003926 638 -NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAV 716 (786)
Q Consensus 638 -~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 716 (786)
.........++..|+|||.+....++.++|||||||++|||++|++||...+.......+ .... ....+.
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~---~~~~-----~~~~~~- 218 (325)
T cd05604 148 AQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNI---LHKP-----LVLRPG- 218 (325)
T ss_pred CCCCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHH---HcCC-----ccCCCC-
Confidence 122223345778899999998888999999999999999999999999765443322211 1100 001111
Q ss_pred cccCcHHHHHHHHHHHHHhccCCCCCCCCH----HHHHHHHHHHHH
Q 003926 717 NKACLDESLKTMMEVCVRCLLKNPAERPSV----EDVLWNLQFAAQ 758 (786)
Q Consensus 717 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~----~evl~~l~~~~~ 758 (786)
....+.+++.+|++.+|.+||++ .++++|+||...
T Consensus 219 -------~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~ 257 (325)
T cd05604 219 -------ASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESL 257 (325)
T ss_pred -------CCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCC
Confidence 12345678889999999999977 588888887653
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=319.55 Aligned_cols=255 Identities=16% Similarity=0.315 Sum_probs=198.8
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCc----EEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGT----FVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~----~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
++|+..+.||+|+||+||+|++ .+|. .||+|.++.... ...+++.+|+.+++.++|+||++++|+|..
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~------ 80 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT------ 80 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC------
Confidence 4677789999999999999985 3454 489999875433 234678999999999999999999998863
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
...+++|||+++|+|.++++... ..+++...+.++.|+++||+|||+. +|+||||||+||++++++.+||+||
T Consensus 81 --~~~~l~~~~~~~g~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~df 153 (279)
T cd05109 81 --STVQLVTQLMPYGCLLDYVRENK--DRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDF 153 (279)
T ss_pred --CCcEEEEEcCCCCCHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCC
Confidence 24689999999999999997532 3589999999999999999999997 9999999999999999999999999
Q ss_pred Cccccccccccc---ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccc
Q 003926 631 NLPLLAENAEKV---GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADES 706 (786)
Q Consensus 631 Gl~~~~~~~~~~---~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (786)
|+++........ ....++..|++||......++.++|||||||++|||++ |++|+.......+...+.. ..
T Consensus 154 G~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~----~~- 228 (279)
T cd05109 154 GLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEK----GE- 228 (279)
T ss_pred CceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC----CC-
Confidence 998755432211 11122456899999888889999999999999999998 8999876544333332221 00
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQV 759 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~ 759 (786)
. +.... .....+.+++.+||+.||++||++.|++..+....+.
T Consensus 229 -~-----~~~~~----~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05109 229 -R-----LPQPP----ICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARD 271 (279)
T ss_pred -c-----CCCCc----cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence 0 00011 1223567888899999999999999999888655443
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-36 Score=333.44 Aligned_cols=272 Identities=17% Similarity=0.201 Sum_probs=201.4
Q ss_pred HhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
..++|...+.||+|+||.||+|+.. .++.||||++..... ...+.+.+|+.+++.++||||+++++++...... ..
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~~ 93 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSL-EE 93 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccc-cc
Confidence 3567888999999999999999854 689999999875432 2346788999999999999999999987532110 11
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
....++||||+++ ++.+++.. .+++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Dfg 164 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 164 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeCc
Confidence 2457999999975 67777653 478888999999999999999997 99999999999999999999999999
Q ss_pred cccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHH-HHHHHHHHHHh-------
Q 003926 632 LPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL-LKNQLQAVVTA------- 703 (786)
Q Consensus 632 l~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~-~~~~~~~~~~~------- 703 (786)
+++............++..|+|||.+....++.++|||||||++|||++|+.||...+... ....+......
T Consensus 165 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (355)
T cd07874 165 LARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 244 (355)
T ss_pred ccccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 9875543333334456788999999988889999999999999999999999997644221 11111110000
Q ss_pred ----------cccccccccccc------cc--ccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 704 ----------DESARRSMVDPA------VN--KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 704 ----------~~~~~~~~~d~~------~~--~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
..........+. .. ..........+.+++.+|++.||++|||+.|+++|+|+.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~ 315 (355)
T cd07874 245 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYIN 315 (355)
T ss_pred hcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchh
Confidence 000000000000 00 001111234567899999999999999999999999875
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-36 Score=313.97 Aligned_cols=251 Identities=18% Similarity=0.301 Sum_probs=200.0
Q ss_pred CCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
+|+..+.||+|+||.||+|+.+ +++.||+|.+..... ...+++.+|++++++++||||+++++++.+ .+.
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~~ 73 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLD-------KGK 73 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeecc-------CCE
Confidence 4677889999999999999965 689999999875432 335679999999999999999999998865 356
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++||||+++++|.++++... ...+++.....++.++++||.|||+. +++||||||+||+++.++.+|++|||+++
T Consensus 74 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~ 149 (256)
T cd08529 74 LNIVMEYAENGDLHKLLKMQR-GRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAK 149 (256)
T ss_pred EEEEEEeCCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccce
Confidence 899999999999999998642 34689999999999999999999987 99999999999999999999999999986
Q ss_pred ccccccc-cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccccc
Q 003926 635 LAENAEK-VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVD 713 (786)
Q Consensus 635 ~~~~~~~-~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 713 (786)
....... .....+...|+|||+.....++.++|||||||++|||++|+.||...........+ ... .. .
T Consensus 150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~~---~~----~ 219 (256)
T cd08529 150 LLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKI---IRG---VF----P 219 (256)
T ss_pred eccCccchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---HcC---CC----C
Confidence 5433221 12234566799999998888999999999999999999999999765432221111 100 00 0
Q ss_pred ccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 714 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
.. .......+.+++.+||+.+|++||++.|++++.+
T Consensus 220 -~~----~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~ 255 (256)
T cd08529 220 -PV----SQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPS 255 (256)
T ss_pred -CC----ccccCHHHHHHHHHHccCCcccCcCHHHHhhCCC
Confidence 01 1122345778889999999999999999998754
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=322.04 Aligned_cols=264 Identities=18% Similarity=0.348 Sum_probs=195.0
Q ss_pred cCCCccCccCCCCCceeEEEEec-----CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-----NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-----~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
.+|+..+.||+|+||.||+|..+ ++..||||++........+.|.+|++++++++||||+++++++... .
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~ 78 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSA-----G 78 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccC-----C
Confidence 46777899999999999999853 5789999998765544456899999999999999999999987541 2
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
....++||||+++|+|.+++.+.. ..++|..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 79 ~~~~~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg 153 (284)
T cd05081 79 RRNLRLVMEYLPYGSLRDYLQKHR--ERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFG 153 (284)
T ss_pred CCceEEEEEecCCCCHHHHHHhcC--cCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCc
Confidence 345899999999999999997532 3589999999999999999999997 99999999999999999999999999
Q ss_pred ccccccccccc----ccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcc--
Q 003926 632 LPLLAENAEKV----GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADE-- 705 (786)
Q Consensus 632 l~~~~~~~~~~----~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~-- 705 (786)
++......... ........|++||......++.++|||||||++|||++|..++........ ........
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~----~~~~~~~~~~ 229 (284)
T cd05081 154 LTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFM----RMMGNDKQGQ 229 (284)
T ss_pred ccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhh----hhcccccccc
Confidence 98654322111 011122358899998888899999999999999999998766533211100 00000000
Q ss_pred cc---ccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 706 SA---RRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 706 ~~---~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
.. ..+.................+.+++.+||+.+|++|||+.||++.++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~ 281 (284)
T cd05081 230 MIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVE 281 (284)
T ss_pred cchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence 00 00000000000001112235778889999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-37 Score=336.60 Aligned_cols=255 Identities=14% Similarity=0.213 Sum_probs=196.0
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|+..+.||+|+||.||+|+. .+++.||||++..... ...+.+.+|++++++++|+||+++++.+.+ .
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~-------~ 73 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQD-------K 73 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEc-------C
Confidence 3688899999999999999985 4689999999875432 234568899999999999999999988764 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..|+||||+++|+|.+++.+. ..++......++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 74 ~~~~lv~E~~~~g~L~~~i~~~---~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~ 147 (376)
T cd05598 74 DNLYFVMDYIPGGDMMSLLIRL---GIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGL 147 (376)
T ss_pred CEEEEEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCC
Confidence 6799999999999999999753 3578888888999999999999997 999999999999999999999999999
Q ss_pred ccccccc--------------------------------------------cccccccccccccCccccccCCCCcccce
Q 003926 633 PLLAENA--------------------------------------------EKVGHVIPYSGSIDPTNSARGKLEEKIDI 668 (786)
Q Consensus 633 ~~~~~~~--------------------------------------------~~~~~~~~~~~~~aPe~~~~~~~t~ksDV 668 (786)
+...... .......|+..|+|||.+....++.++||
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di 227 (376)
T cd05598 148 CTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDW 227 (376)
T ss_pred CccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceee
Confidence 6421100 00012357788999999988889999999
Q ss_pred eehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCC---C
Q 003926 669 YDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERP---S 745 (786)
Q Consensus 669 wSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP---t 745 (786)
|||||++|||++|++||...........+... . .....+. .. .....+.+++.+|+ .+|.+|+ +
T Consensus 228 wSlGvilyell~G~~Pf~~~~~~~~~~~i~~~---~----~~~~~~~-~~----~~s~~~~~li~~l~-~~p~~R~~~~t 294 (376)
T cd05598 228 WSVGVILYEMLVGQPPFLADTPAETQLKVINW---E----TTLHIPS-QA----KLSREASDLILRLC-CGAEDRLGKNG 294 (376)
T ss_pred eeccceeeehhhCCCCCCCCCHHHHHHHHhcc---C----ccccCCC-CC----CCCHHHHHHHHHHh-cCHhhcCCCCC
Confidence 99999999999999999765543322211110 0 0000010 00 11223445666655 5999999 9
Q ss_pred HHHHHHHHHHHH
Q 003926 746 VEDVLWNLQFAA 757 (786)
Q Consensus 746 ~~evl~~l~~~~ 757 (786)
+.|+++|+|+..
T Consensus 295 ~~ell~h~~~~~ 306 (376)
T cd05598 295 ADEIKAHPFFKG 306 (376)
T ss_pred HHHHhCCCCcCC
Confidence 999999999764
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-37 Score=291.90 Aligned_cols=264 Identities=16% Similarity=0.221 Sum_probs=203.1
Q ss_pred hcCCCccCccCCCCCceeEEEE-ecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
-+.|.+.+.+|+|||+.||.+. ..++..+|+|++.....++.+..++|++..++++||||+++++++.....+ ...+
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D--~~~~ 97 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKD--GKHE 97 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhcc--Ccee
Confidence 4567888999999999999998 778999999999877766778899999999999999999999998753222 4567
Q ss_pred EEEEEecCCCCChhHHhhcCCC-CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHA-HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~-~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
.||+++|...|+|.+.+...+. +..++..+.+.|+.++++||.+||.. .|+++||||||.|||+.+.+.+++.|||-+
T Consensus 98 ~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~ 176 (302)
T KOG2345|consen 98 AYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSA 176 (302)
T ss_pred EEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCc
Confidence 8999999999999999976433 34789999999999999999999995 457999999999999999999999999987
Q ss_pred cccccc---cc-------cccccccccccCcccccc---CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHH
Q 003926 634 LLAENA---EK-------VGHVIPYSGSIDPTNSAR---GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAV 700 (786)
Q Consensus 634 ~~~~~~---~~-------~~~~~~~~~~~aPe~~~~---~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~ 700 (786)
....-. .. -.....+..|.|||.+.- ...++++|||||||+||+|+.|..||+.....
T Consensus 177 ~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~--------- 247 (302)
T KOG2345|consen 177 TQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQ--------- 247 (302)
T ss_pred cccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhc---------
Confidence 543211 00 011234567899998754 34789999999999999999999999642110
Q ss_pred HHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 701 VTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 701 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
...-.-.+..+.+.-.........+.+++..|++.||.+||++.|++.++.
T Consensus 248 ---GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d 298 (302)
T KOG2345|consen 248 ---GGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLD 298 (302)
T ss_pred ---CCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHH
Confidence 000000011111110000112346778888999999999999999998875
|
|
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-38 Score=330.61 Aligned_cols=253 Identities=18% Similarity=0.316 Sum_probs=205.0
Q ss_pred CCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEE
Q 003926 479 FDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFL 557 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~L 557 (786)
|++...||.|+||.||||+-+ ++...|.|.+........++|+-||+||+.+.||+||++++.|+. .+.+|+
T Consensus 34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~-------enkLwi 106 (1187)
T KOG0579|consen 34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYF-------ENKLWI 106 (1187)
T ss_pred HHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhc-------cCceEE
Confidence 345678999999999999865 466778899987777778899999999999999999999997754 457999
Q ss_pred EEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc-ccc
Q 003926 558 IFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP-LLA 636 (786)
Q Consensus 558 V~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~-~~~ 636 (786)
..|||+||-.+.++-+. ...|+..+...++.+++.||.|||+. .|||||||+.|||+.-+|.++++|||++ +..
T Consensus 107 liEFC~GGAVDaimlEL--~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~ 181 (1187)
T KOG0579|consen 107 LIEFCGGGAVDAIMLEL--GRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNK 181 (1187)
T ss_pred EEeecCCchHhHHHHHh--ccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccch
Confidence 99999999999887653 34699999999999999999999998 9999999999999999999999999997 333
Q ss_pred ccccccccccccccccCccccc-----cCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 637 ENAEKVGHVIPYSGSIDPTNSA-----RGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 637 ~~~~~~~~~~~~~~~~aPe~~~-----~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
.........+||++|||||+.. ...|+.++|||||||+|.||.-+.||....+...+.-.+.. . ..
T Consensus 182 ~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaK--S----eP--- 252 (1187)
T KOG0579|consen 182 STRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAK--S----EP--- 252 (1187)
T ss_pred hHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhh--c----CC---
Confidence 3334455678999999998754 45699999999999999999999999876544322211111 1 11
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
|.+. .+......+-++..+||.+||..||++.++++|+|+.
T Consensus 253 --PTLl--qPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~ 293 (1187)
T KOG0579|consen 253 --PTLL--QPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQ 293 (1187)
T ss_pred --Cccc--CcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccc
Confidence 2221 1233445677888899999999999999999999854
|
|
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-36 Score=315.50 Aligned_cols=257 Identities=17% Similarity=0.331 Sum_probs=196.6
Q ss_pred CCccCccCCCCCceeEEEEecC----CcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 479 FDTSAFMGEGSQGQMYRGRLKN----GTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~~----g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
|...+.||+|+||.||+|.... +..||||+++..... ....|.+|++.++.++|+||++++|++.+.... ...
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~-~~~ 79 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSL-QKI 79 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCcc-ccC
Confidence 4567899999999999998642 468999998764332 235799999999999999999999988652210 112
Q ss_pred ceEEEEEecCCCCChhHHhhcCC---CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccC
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGH---AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISS 629 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~---~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 629 (786)
...++||||+++|+|.+++.... ....+++.....++.|++.||+|||+. +++||||||+||++++++.+||+|
T Consensus 80 ~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~d 156 (273)
T cd05035 80 PKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVAD 156 (273)
T ss_pred cccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECC
Confidence 34799999999999999985432 224689999999999999999999997 999999999999999999999999
Q ss_pred CCccccccccccc---ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcc
Q 003926 630 YNLPLLAENAEKV---GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADE 705 (786)
Q Consensus 630 fGl~~~~~~~~~~---~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 705 (786)
||+++........ .....+..|++||......++.++|||||||++|||++ |.+|+.........+.+. ...
T Consensus 157 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~---~~~- 232 (273)
T cd05035 157 FGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLR---HGN- 232 (273)
T ss_pred ccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH---cCC-
Confidence 9998654322211 11122346899999888889999999999999999999 888887654333222211 100
Q ss_pred ccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 706 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
.+.... .....+.+++.+||+.||++||++.||++++.
T Consensus 233 -------~~~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~ 270 (273)
T cd05035 233 -------RLKQPE----DCLDELYDLMYSCWRADPKDRPTFTKLREVLE 270 (273)
T ss_pred -------CCCCCc----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 011111 22346778889999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-36 Score=312.45 Aligned_cols=250 Identities=24% Similarity=0.433 Sum_probs=198.0
Q ss_pred cCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~ 556 (786)
++|+..+.||+|+||.||+|..+++..||+|.+..... ..+.|.+|+.++++++|+||+++++++.. ...+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~--------~~~~ 76 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVSE--------EPIY 76 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEECC--------CCcE
Confidence 45777899999999999999988888999999876443 45679999999999999999999987642 3478
Q ss_pred EEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccc
Q 003926 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636 (786)
Q Consensus 557 LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~ 636 (786)
+||||+++|+|.+++++.. ...+++.++..++.+++.||+|||+. +++||||||+||++++++.+|++|||++...
T Consensus 77 lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~ 152 (260)
T cd05070 77 IVTEYMSKGSLLDFLKDGE-GRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLI 152 (260)
T ss_pred EEEEecCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeec
Confidence 9999999999999997532 34589999999999999999999997 9999999999999999999999999998654
Q ss_pred cccccc--ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccccccccc
Q 003926 637 ENAEKV--GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMVD 713 (786)
Q Consensus 637 ~~~~~~--~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 713 (786)
...... ....+...|+|||......++.++||||||+++|||++ |++||...........+.. .. .
T Consensus 153 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~---~~--------~ 221 (260)
T cd05070 153 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVER---GY--------R 221 (260)
T ss_pred cCcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc---CC--------C
Confidence 322111 11223346899999888889999999999999999999 8899876443322222110 00 0
Q ss_pred ccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 714 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
+. .+......+.+++.+||..+|++|||++++.+.++
T Consensus 222 ~~----~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 258 (260)
T cd05070 222 MP----CPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLE 258 (260)
T ss_pred CC----CCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHh
Confidence 00 11122345778899999999999999999997764
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-36 Score=326.50 Aligned_cols=267 Identities=16% Similarity=0.256 Sum_probs=194.3
Q ss_pred cCccCCC--CCceeEEEEe-cCCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEE
Q 003926 482 SAFMGEG--SQGQMYRGRL-KNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (786)
Q Consensus 482 ~~~iG~G--~fg~Vy~~~~-~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~ 556 (786)
.++||+| +|++||+++. ++|+.||||+++..... ..+.+.+|+++++.++|||||+++++|.. .+..+
T Consensus 3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~-------~~~~~ 75 (327)
T cd08227 3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIA-------DNELW 75 (327)
T ss_pred hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEE-------CCEEE
Confidence 5789999 7889999985 57999999999765432 23457789999999999999999999875 45689
Q ss_pred EEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccc
Q 003926 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636 (786)
Q Consensus 557 LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~ 636 (786)
+||||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++||+.....
T Consensus 76 lv~e~~~~~~l~~~~~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~ 151 (327)
T cd08227 76 VVTSFMAYGSAKDLICTHF-MDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSM 151 (327)
T ss_pred EEEeccCCCcHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhcc
Confidence 9999999999999996532 23589999999999999999999987 9999999999999999999999999865322
Q ss_pred cc-ccc-------cccccccccccCcccccc--CCCCcccceeehhHHHHHHHhCCCCCCCchhHHH-HHHHHHHHHhc-
Q 003926 637 EN-AEK-------VGHVIPYSGSIDPTNSAR--GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLL-KNQLQAVVTAD- 704 (786)
Q Consensus 637 ~~-~~~-------~~~~~~~~~~~aPe~~~~--~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~-~~~~~~~~~~~- 704 (786)
.. ... .....++..|+|||.+.. ..++.++|||||||++|||++|+.||........ ...........
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 231 (327)
T cd08227 152 INHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLL 231 (327)
T ss_pred ccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccc
Confidence 11 100 011223456899999865 3589999999999999999999999975432221 11110000000
Q ss_pred -------cc----cccccccc-----------------cccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 705 -------ES----ARRSMVDP-----------------AVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 705 -------~~----~~~~~~d~-----------------~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
+. ......+. .............+.+++.+||+.||++|||++|+++|+||.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~ 311 (327)
T cd08227 232 DTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFK 311 (327)
T ss_pred cccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhh
Confidence 00 00000000 000001112234677899999999999999999999999997
Q ss_pred HHh
Q 003926 757 AQV 759 (786)
Q Consensus 757 ~~~ 759 (786)
+..
T Consensus 312 ~~~ 314 (327)
T cd08227 312 QIK 314 (327)
T ss_pred hcc
Confidence 643
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-36 Score=313.84 Aligned_cols=250 Identities=25% Similarity=0.416 Sum_probs=197.5
Q ss_pred cCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~ 556 (786)
++|...+.||+|+||.||+|+.+++..||+|+++... ...+.|.+|++++++++|+||+++++++.+ +..+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~--------~~~~ 76 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE--------EPIY 76 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEECC--------CCcE
Confidence 4577889999999999999998776789999987543 245679999999999999999999987642 3479
Q ss_pred EEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccc
Q 003926 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636 (786)
Q Consensus 557 LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~ 636 (786)
+||||+++|+|.+++.+.. ...+++..+..++.|+++||+|||+. +++||||||+||++++++.+||+|||.+...
T Consensus 77 lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~ 152 (262)
T cd05071 77 IVTEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLI 152 (262)
T ss_pred EEEEcCCCCcHHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeec
Confidence 9999999999999997532 23579999999999999999999997 9999999999999999999999999998654
Q ss_pred cccccc--ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccccccccc
Q 003926 637 ENAEKV--GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMVD 713 (786)
Q Consensus 637 ~~~~~~--~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 713 (786)
...... ....++..|++||......++.++||||||+++|||+| |++||...........+. .. ..
T Consensus 153 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~----~~---~~---- 221 (262)
T cd05071 153 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE----RG---YR---- 221 (262)
T ss_pred cccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHh----cC---CC----
Confidence 322211 11223456899999888889999999999999999999 888886544332221111 00 00
Q ss_pred ccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 714 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
. ....+....+.+++.+|++.+|++||++.++++.++
T Consensus 222 ~----~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~ 258 (262)
T cd05071 222 M----PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 258 (262)
T ss_pred C----CCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHH
Confidence 0 011223346778999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-36 Score=312.63 Aligned_cols=242 Identities=20% Similarity=0.307 Sum_probs=190.3
Q ss_pred ccCCCCCceeEEEEec---CCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEEE
Q 003926 484 FMGEGSQGQMYRGRLK---NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLI 558 (786)
Q Consensus 484 ~iG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV 558 (786)
.||+|+||.||+|.++ ++..||+|+++..... ..++|.+|+.++++++|+||++++|++.. +..++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------~~~~lv 73 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA--------ESWMLV 73 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC--------CCcEEE
Confidence 5899999999999753 5789999998754322 24679999999999999999999998742 346899
Q ss_pred EecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccccc
Q 003926 559 FEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAEN 638 (786)
Q Consensus 559 ~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~ 638 (786)
|||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 74 ~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~ 147 (257)
T cd05116 74 MELAELGPLNKFLQKN---KHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGA 147 (257)
T ss_pred EecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCC
Confidence 9999999999999753 3588999999999999999999987 999999999999999999999999999865432
Q ss_pred cccc----ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccccccccc
Q 003926 639 AEKV----GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMVD 713 (786)
Q Consensus 639 ~~~~----~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 713 (786)
.... ....++..|+|||......++.++|||||||++|||++ |++||...........+. .. ..
T Consensus 148 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~----~~--~~----- 216 (257)
T cd05116 148 DENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIE----SG--ER----- 216 (257)
T ss_pred CCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH----CC--CC-----
Confidence 2211 11122357899998887788999999999999999998 999997654433322221 11 00
Q ss_pred ccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 714 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
+..+..+ ...+.+++.+||+.||++||++.+|.+.|.
T Consensus 217 ~~~~~~~----~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~ 253 (257)
T cd05116 217 MECPQRC----PPEMYDLMKLCWTYGVDERPGFAVVELRLR 253 (257)
T ss_pred CCCCCCC----CHHHHHHHHHHhccCchhCcCHHHHHHHHh
Confidence 1111122 235668889999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-36 Score=314.54 Aligned_cols=252 Identities=18% Similarity=0.293 Sum_probs=198.2
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCC-----ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCH-----STRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~-----~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
++|+..+.||+|+||.||+|.. .++..||+|.+...... ..+.+.+|++++++++||||+++++++.+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------ 75 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRD------ 75 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEcc------
Confidence 4688899999999999999985 46899999998754321 23568899999999999999999998865
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
.+..++||||+++|+|.+++... ..+++.....++.+++.||.|||+. +|+||||||+||++++++.+||+||
T Consensus 76 -~~~~~~v~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~df 148 (263)
T cd06625 76 -DETLSIFMEYMPGGSVKDQLKAY---GALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDF 148 (263)
T ss_pred -CCeEEEEEEECCCCcHHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeec
Confidence 35789999999999999998753 3578888999999999999999997 9999999999999999999999999
Q ss_pred Cccccccccccc----ccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccc
Q 003926 631 NLPLLAENAEKV----GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADES 706 (786)
Q Consensus 631 Gl~~~~~~~~~~----~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (786)
|++......... ....+...|+|||......++.++|||||||++|||++|+.||...+........ ....
T Consensus 149 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~---~~~~-- 223 (263)
T cd06625 149 GASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKI---ATQP-- 223 (263)
T ss_pred ccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHH---hccC--
Confidence 998644322111 1233456799999998888999999999999999999999998654332211111 0000
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
. .+.... .....+.+++.+||..+|++|||+.|+++|+||
T Consensus 224 -~----~~~~~~----~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 224 -T----NPQLPS----HVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred -C----CCCCCc----cCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 0 011111 122356678889999999999999999998874
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-37 Score=327.49 Aligned_cols=249 Identities=22% Similarity=0.340 Sum_probs=199.8
Q ss_pred ccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEEEEecC
Q 003926 484 FMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYV 562 (786)
Q Consensus 484 ~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV~Ey~ 562 (786)
++|+|.||+||-|+. .+...+|||.+........+-...||.+.++++|+|||+++|.|.+ ++...+.||-+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~se-------nGf~kIFMEqV 654 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSE-------NGFFKIFMEQV 654 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCC-------CCeEEEEeecC
Confidence 699999999999995 4577899999987776667778899999999999999999999865 45688999999
Q ss_pred CCCChhHHhhcCCCCCCC--CHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeec-CCCcccccCCCcccccccc
Q 003926 563 PNGTLRSWISEGHAHQSL--TWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD-QNLVAKISSYNLPLLAENA 639 (786)
Q Consensus 563 ~~GsL~~~l~~~~~~~~l--~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld-~~~~~kl~DfGl~~~~~~~ 639 (786)
|||||.++|+.. ..++ ...+.-.+..||.+||.|||++ .|||||||-.|||++ -.|.+||+|||-++.....
T Consensus 655 PGGSLSsLLrsk--WGPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi 729 (1226)
T KOG4279|consen 655 PGGSLSSLLRSK--WGPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI 729 (1226)
T ss_pred CCCcHHHHHHhc--cCCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhccC
Confidence 999999999864 2344 6677778899999999999998 999999999999997 5689999999998654322
Q ss_pred c-ccccccccccccCccccccC--CCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccc
Q 003926 640 E-KVGHVIPYSGSIDPTNSARG--KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAV 716 (786)
Q Consensus 640 ~-~~~~~~~~~~~~aPe~~~~~--~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 716 (786)
. -..+..||.-|||||++..+ .|+.++|||||||++.||.||+|||......... ++... .-.+.|.
T Consensus 730 nP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAA-----MFkVG----myKvHP~- 799 (1226)
T KOG4279|consen 730 NPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAA-----MFKVG----MYKVHPP- 799 (1226)
T ss_pred CccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHh-----hhhhc----ceecCCC-
Confidence 2 23456788899999998765 4899999999999999999999999653321111 11100 0001122
Q ss_pred cccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 717 NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 717 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.+.+...+...++.+|+.+||.+||++.+++..++...
T Consensus 800 ---iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~ 837 (1226)
T KOG4279|consen 800 ---IPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQH 837 (1226)
T ss_pred ---CcHHHHHHHHHHHHHHcCCCcccCccHHHhccCccccc
Confidence 34666677888999999999999999999999887543
|
|
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-36 Score=317.61 Aligned_cols=255 Identities=23% Similarity=0.385 Sum_probs=196.6
Q ss_pred HhcCCCccCccCCCCCceeEEEEec------CCcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeeeccc
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYF 547 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~ 547 (786)
++++|...+.||+|+||.||+|... .+..||+|.+...... ....|.+|+.++++++|+||+++++++.+
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--- 80 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFE--- 80 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEcc---
Confidence 3466888899999999999999864 3578999988644322 24569999999999999999999998765
Q ss_pred cCCCCceEEEEEecCCCCChhHHhhcCCC----CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC
Q 003926 548 DDSSVSRIFLIFEYVPNGTLRSWISEGHA----HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL 623 (786)
Q Consensus 548 ~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~----~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~ 623 (786)
.+..++||||+++|+|.+++..... ...++|.+++.++.|+++|++|||+. +++||||||+||+++.++
T Consensus 81 ----~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~ 153 (277)
T cd05036 81 ----RLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKG 153 (277)
T ss_pred ----CCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccC
Confidence 3457999999999999999975321 13589999999999999999999997 899999999999998754
Q ss_pred ---cccccCCCccccccccccc---ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHH
Q 003926 624 ---VAKISSYNLPLLAENAEKV---GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQ 696 (786)
Q Consensus 624 ---~~kl~DfGl~~~~~~~~~~---~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~ 696 (786)
.+|++|||+++........ ........|+|||.+....++.++|||||||++|||++ |+.||...........
T Consensus 154 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~ 233 (277)
T cd05036 154 PGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEF 233 (277)
T ss_pred CCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 5899999998655321111 11112346899999988889999999999999999997 9999876544333222
Q ss_pred HHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 697 LQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 697 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
+.. .. + +.....+ ...+.+++.+||+.+|++||++.||++++.
T Consensus 234 ~~~---~~----~----~~~~~~~----~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 234 VTG---GG----R----LDPPKGC----PGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HHc---CC----c----CCCCCCC----CHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 111 00 0 0011112 245678888999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-36 Score=319.41 Aligned_cols=255 Identities=20% Similarity=0.382 Sum_probs=198.5
Q ss_pred HhcCCCccCccCCCCCceeEEEEec------CCcEEEEEEecccCC-CChHHHHHHHHHHhcC-CCCCcceeeeeeeecc
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKC-HSTRNFMHHIELISKL-RHRHLVSALGHCFECY 546 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~ 546 (786)
..++|+..+.||+|+||.||+|... ....||+|.+..... ....++.+|+++++++ +|+||++++++|..
T Consensus 10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-- 87 (293)
T cd05053 10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQ-- 87 (293)
T ss_pred CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcC--
Confidence 4456788899999999999999864 236899999875432 2235689999999999 89999999998864
Q ss_pred ccCCCCceEEEEEecCCCCChhHHhhcC-------------CCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCC
Q 003926 547 FDDSSVSRIFLIFEYVPNGTLRSWISEG-------------HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLK 613 (786)
Q Consensus 547 ~~~~~~~~~~LV~Ey~~~GsL~~~l~~~-------------~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk 613 (786)
.+..++||||+++|+|.++++.. .....+++..++.++.|++.||+|||+. +|+|||||
T Consensus 88 -----~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlk 159 (293)
T cd05053 88 -----EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLA 159 (293)
T ss_pred -----CCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---Cccccccc
Confidence 35689999999999999999642 1234689999999999999999999987 99999999
Q ss_pred CCceeecCCCcccccCCCccccccccccc---ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCch
Q 003926 614 ITDILLDQNLVAKISSYNLPLLAENAEKV---GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKE 689 (786)
Q Consensus 614 ~~NILld~~~~~kl~DfGl~~~~~~~~~~---~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~ 689 (786)
|+||+++.++.+|++|||+++........ .....+..|+|||......++.++|||||||++|||++ |..|+....
T Consensus 160 p~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~ 239 (293)
T cd05053 160 ARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP 239 (293)
T ss_pred eeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCC
Confidence 99999999999999999998655332211 11122346899999888889999999999999999998 888887654
Q ss_pred hHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 690 VDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
.......+.. .. . +... ......+.+++.+||..||++|||+.|+++++.
T Consensus 240 ~~~~~~~~~~----~~--~-----~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~ 289 (293)
T cd05053 240 VEELFKLLKE----GY--R-----MEKP----QNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLD 289 (293)
T ss_pred HHHHHHHHHc----CC--c-----CCCC----CCCCHHHHHHHHHHcccCcccCcCHHHHHHHHH
Confidence 4333222111 00 0 0011 112245778999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-36 Score=332.40 Aligned_cols=271 Identities=18% Similarity=0.266 Sum_probs=199.4
Q ss_pred CCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 478 NFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
+|+..+.||+|+||.||+|+. .+|+.||||++..... ...+.+.+|+++++.++|+||+++++++..... .....
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~~~~~ 78 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHI--DPFEE 78 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCc--cccce
Confidence 477889999999999999995 4799999999865322 234678999999999999999999998764211 11236
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.|+||||+. ++|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 79 ~~lv~e~~~-~~l~~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~ 151 (372)
T cd07853 79 IYVVTELMQ-SDLHKIIVSP---QPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLAR 151 (372)
T ss_pred EEEEeeccc-cCHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEecccccee
Confidence 899999997 5888887642 3589999999999999999999997 99999999999999999999999999986
Q ss_pred cccccc--ccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhc-ccc---
Q 003926 635 LAENAE--KVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD-ESA--- 707 (786)
Q Consensus 635 ~~~~~~--~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~-~~~--- 707 (786)
...... ......++..|+|||.+.+. .++.++|||||||++|||++|++||...........+....... ...
T Consensus 152 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~ 231 (372)
T cd07853 152 VEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRS 231 (372)
T ss_pred ecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHH
Confidence 543221 11223456779999987653 47999999999999999999999997654322221111110000 000
Q ss_pred ---------cccccc-cccc--ccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 708 ---------RRSMVD-PAVN--KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 708 ---------~~~~~d-~~~~--~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
...... +... ..........+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 293 (372)
T cd07853 232 ACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDE 293 (372)
T ss_pred hhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCC
Confidence 000000 0000 0001112345678899999999999999999999999875
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=326.75 Aligned_cols=245 Identities=19% Similarity=0.304 Sum_probs=190.1
Q ss_pred CccCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHHHHH-HHhcCCCCCcceeeeeeeeccccCCCCceEEE
Q 003926 483 AFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIE-LISKLRHRHLVSALGHCFECYFDDSSVSRIFL 557 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~-~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~L 557 (786)
+.||+|+||.||+|+.. +|+.||+|++..... .....+.+|.. +++.++|||||++++++.. .+..|+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~-------~~~~~l 73 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQT-------AEKLYF 73 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEc-------CCEEEE
Confidence 46899999999999965 689999999875432 22345666654 6788999999999988764 457899
Q ss_pred EEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccc
Q 003926 558 IFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637 (786)
Q Consensus 558 V~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~ 637 (786)
||||+++|+|..++... ..++......++.|+++||.|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 74 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 147 (321)
T cd05603 74 VLDYVNGGELFFHLQRE---RCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGV 147 (321)
T ss_pred EEcCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCC
Confidence 99999999999988653 3578888888999999999999987 99999999999999999999999999986432
Q ss_pred -cccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccc
Q 003926 638 -NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAV 716 (786)
Q Consensus 638 -~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 716 (786)
.........++..|+|||.+....++.++|||||||++|||++|++||...+.......+. ... ..+
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~---~~~---------~~~ 215 (321)
T cd05603 148 EPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNIL---HKP---------LQL 215 (321)
T ss_pred CCCCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHh---cCC---------CCC
Confidence 1222233456788999999988889999999999999999999999997665433322211 100 001
Q ss_pred cccCcHHHHHHHHHHHHHhccCCCCCCCCH----HHHHHHHHHH
Q 003926 717 NKACLDESLKTMMEVCVRCLLKNPAERPSV----EDVLWNLQFA 756 (786)
Q Consensus 717 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~----~evl~~l~~~ 756 (786)
+ ......+.+++.+|++.||++||++ .|+++|+|+.
T Consensus 216 ~----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~ 255 (321)
T cd05603 216 P----GGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFS 255 (321)
T ss_pred C----CCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcC
Confidence 1 1112356678889999999999865 5888888764
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-36 Score=316.53 Aligned_cols=254 Identities=19% Similarity=0.311 Sum_probs=196.7
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
.+|+..+.||+|+||.||+|+. .+++.||+|++..........+.+|+.++++++||||+++++++.. .+..
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~-------~~~~ 81 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLS-------REKL 81 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEe-------CCEE
Confidence 4678889999999999999995 5689999999976544455678899999999999999999998865 3568
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
++||||+++|+|.++++.. ..+++..+..++.|++.|+.|||+. +|+|||+||+||+++.++.+||+|||++..
T Consensus 82 ~iv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~ 155 (267)
T cd06646 82 WICMEYCGGGSLQDIYHVT---GPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAK 155 (267)
T ss_pred EEEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCcccee
Confidence 9999999999999998753 3588999999999999999999997 999999999999999999999999999864
Q ss_pred ccccc-ccccccccccccCccccc---cCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 636 AENAE-KVGHVIPYSGSIDPTNSA---RGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 636 ~~~~~-~~~~~~~~~~~~aPe~~~---~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
..... ......++..|++||.+. ...++.++|||||||++|||++|++|+.......... ... ....
T Consensus 156 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~------~~~---~~~~ 226 (267)
T cd06646 156 ITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF------LMS---KSNF 226 (267)
T ss_pred ecccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhe------eee---cCCC
Confidence 43221 112234566799999864 3457889999999999999999999985432211000 000 0000
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
..+.... .......+.+++.+||+.+|++||++++|+++++
T Consensus 227 ~~~~~~~--~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 227 QPPKLKD--KTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred CCCCCcc--ccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 0111100 1122346778889999999999999999998764
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-36 Score=310.63 Aligned_cols=245 Identities=20% Similarity=0.374 Sum_probs=190.6
Q ss_pred CccCCCCCceeEEEEec-CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEEEEe
Q 003926 483 AFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFE 560 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV~E 560 (786)
+.||+|+||.||+|+.+ +++.||+|.+..... .....|.+|++++++++||||++++++|.. ....++|||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~~~~lv~e 73 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ-------KQPIYIVME 73 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-------CCCeEEEEe
Confidence 46899999999999964 789999998764432 224579999999999999999999998864 346899999
Q ss_pred cCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccccccc
Q 003926 561 YVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE 640 (786)
Q Consensus 561 y~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~ 640 (786)
|+++|+|.+++.... ..+++...+.++.|++.||+|||+. +++||||||+||+++.++.+|++|||++.......
T Consensus 74 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~ 148 (252)
T cd05084 74 LVQGGDFLTFLRTEG--PRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGV 148 (252)
T ss_pred eccCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCccccccc
Confidence 999999999997532 3589999999999999999999997 99999999999999999999999999986433211
Q ss_pred ccc---cccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccccccccccccc
Q 003926 641 KVG---HVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAV 716 (786)
Q Consensus 641 ~~~---~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 716 (786)
... .......|+|||.+..+.++.++|||||||++|||++ |.+|+...........+.. . .. ..
T Consensus 149 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~----~---~~----~~- 216 (252)
T cd05084 149 YASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQ----G---VR----LP- 216 (252)
T ss_pred ccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHc----C---CC----CC-
Confidence 110 0111235899999888889999999999999999998 8888865433222211110 0 00 00
Q ss_pred cccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 717 NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 717 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
.+......+.+++.+||+.+|++|||+.||++.+.
T Consensus 217 ---~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 217 ---CPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred ---CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 11122345778889999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=326.71 Aligned_cols=252 Identities=21% Similarity=0.303 Sum_probs=197.0
Q ss_pred CCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcCC-CCCcceeeeeeeeccccCCCC
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLR-HRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~-H~NIv~l~g~~~~~~~~~~~~ 552 (786)
+|+..+.||+|+||.||+|+.+ +|+.||||++.... ....+.+..|.++++.+. |++|+++.+++.. .
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-------~ 73 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQT-------V 73 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEec-------C
Confidence 4677899999999999999854 68999999987542 223456888999998886 5677778776654 3
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..|+||||+++|+|.+++... ..+++.+...++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 74 ~~~~lv~Ey~~~g~L~~~i~~~---~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~ 147 (323)
T cd05615 74 DRLYFVMEYVNGGDLMYHIQQV---GKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGM 147 (323)
T ss_pred CEEEEEEcCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEecccc
Confidence 5689999999999999998753 3589999999999999999999997 999999999999999999999999999
Q ss_pred ccccccc-cccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 633 PLLAENA-EKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 633 ~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
++..... .......++..|+|||.+....++.++|||||||++|||+||++||...........+. ...
T Consensus 148 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~---~~~------- 217 (323)
T cd05615 148 CKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIM---EHN------- 217 (323)
T ss_pred ccccCCCCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH---hCC-------
Confidence 8643211 12223456788999999988889999999999999999999999997655433322211 110
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCC-----HHHHHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPS-----VEDVLWNLQFAAQ 758 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt-----~~evl~~l~~~~~ 758 (786)
...+. .....+.+++.+|++++|++|++ ..|+.+|.||...
T Consensus 218 --~~~p~----~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~ 263 (323)
T cd05615 218 --VSYPK----SLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRI 263 (323)
T ss_pred --CCCCc----cCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCC
Confidence 00111 11235667888999999999997 4788888887653
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-36 Score=317.85 Aligned_cols=260 Identities=17% Similarity=0.330 Sum_probs=194.3
Q ss_pred cCCCccCccCCCCCceeEEEEecC---------------CcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeee
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKN---------------GTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALG 540 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~---------------g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g 540 (786)
++|+..+.||+|+||.||+++.+. ...||||.++..... ....|.+|++++++++|+||+++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 467888999999999999987532 235899998754322 2457999999999999999999999
Q ss_pred eeeeccccCCCCceEEEEEecCCCCChhHHhhcCC---------CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccC
Q 003926 541 HCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGH---------AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNN 611 (786)
Q Consensus 541 ~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~---------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrd 611 (786)
++.. .+..++||||+++|+|.+++.... ....++|..++.++.|+++||+|||+. +++|||
T Consensus 85 ~~~~-------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~d 154 (295)
T cd05097 85 VCVS-------DDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRD 154 (295)
T ss_pred EEcC-------CCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---Ceeccc
Confidence 8864 356899999999999999986431 112478999999999999999999997 999999
Q ss_pred CCCCceeecCCCcccccCCCccccccccccc---ccccccccccCccccccCCCCcccceeehhHHHHHHHh--CCCCCC
Q 003926 612 LKITDILLDQNLVAKISSYNLPLLAENAEKV---GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV--GRPLKS 686 (786)
Q Consensus 612 lk~~NILld~~~~~kl~DfGl~~~~~~~~~~---~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt--G~~p~~ 686 (786)
|||+||+++.++.+||+|||++......... ....++..|+|||....+.++.++|||||||++|||++ |..||.
T Consensus 155 lkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~ 234 (295)
T cd05097 155 LATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYS 234 (295)
T ss_pred cChhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCc
Confidence 9999999999999999999998644222111 11223457899999888889999999999999999998 556776
Q ss_pred CchhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 687 RKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
................... ..... .... .....+.+++.+||+.||++||+|.+|++.|.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~----~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 235 LLSDEQVIENTGEFFRNQG---RQIYL-SQTP----LCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred ccChHHHHHHHHHhhhhcc---ccccC-CCCC----CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 5433332222111111100 00000 0001 11236778999999999999999999998774
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-36 Score=330.89 Aligned_cols=263 Identities=15% Similarity=0.240 Sum_probs=200.9
Q ss_pred HHHHHHHhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeeee
Q 003926 469 LEELEEATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFE 544 (786)
Q Consensus 469 ~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~ 544 (786)
+.++....++|...+.||+|+||.||+|+.+ +++.||+|++..... ...+.+.+|+.+++.++||||+++++++..
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 3445556688999999999999999999965 688999999864321 223558899999999999999999988764
Q ss_pred ccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCc
Q 003926 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV 624 (786)
Q Consensus 545 ~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~ 624 (786)
.+..++||||+++|+|.+++... .++......++.|++.||+|||+. +|+||||||+|||++.++.
T Consensus 115 -------~~~~~lv~Ey~~gg~L~~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ 180 (371)
T cd05622 115 -------DRYLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGH 180 (371)
T ss_pred -------CCEEEEEEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCC
Confidence 45789999999999999998752 477888888999999999999997 9999999999999999999
Q ss_pred ccccCCCccccccccc--ccccccccccccCccccccC----CCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHH
Q 003926 625 AKISSYNLPLLAENAE--KVGHVIPYSGSIDPTNSARG----KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQ 698 (786)
Q Consensus 625 ~kl~DfGl~~~~~~~~--~~~~~~~~~~~~aPe~~~~~----~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~ 698 (786)
+||+|||++....... ......++..|+|||.+... .++.++|||||||++|||++|++||...+.......+
T Consensus 181 ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i- 259 (371)
T cd05622 181 LKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKI- 259 (371)
T ss_pred EEEEeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHH-
Confidence 9999999986543221 12244578889999987643 3789999999999999999999999765443221111
Q ss_pred HHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCC--CCCHHHHHHHHHHHH
Q 003926 699 AVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAE--RPSVEDVLWNLQFAA 757 (786)
Q Consensus 699 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~--RPt~~evl~~l~~~~ 757 (786)
..... .....+ .......+.+++.+|+..++.+ ||++.|+++|+|+..
T Consensus 260 --~~~~~--~~~~~~-------~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~ 309 (371)
T cd05622 260 --MNHKN--SLTFPD-------DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKN 309 (371)
T ss_pred --HcCCC--cccCCC-------cCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCC
Confidence 11000 000001 0112234567778899844443 789999999999864
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-36 Score=315.83 Aligned_cols=238 Identities=23% Similarity=0.363 Sum_probs=183.0
Q ss_pred ccCCCCCceeEEEEecC-------------------------CcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCccee
Q 003926 484 FMGEGSQGQMYRGRLKN-------------------------GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSA 538 (786)
Q Consensus 484 ~iG~G~fg~Vy~~~~~~-------------------------g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l 538 (786)
.||+|+||.||+|++.. ...||+|.+.........+|.+|++++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 58999999999998521 23589999876544445679999999999999999999
Q ss_pred eeeeeeccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCcee
Q 003926 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDIL 618 (786)
Q Consensus 539 ~g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NIL 618 (786)
+|+|.+ ....++||||+++|+|..++... ...+++..++.++.|+++||+|||+. +|+||||||+||+
T Consensus 82 ~~~~~~-------~~~~~lv~ey~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nil 149 (274)
T cd05076 82 HGVCVR-------GSENIMVEEFVEHGPLDVCLRKE--KGRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNIL 149 (274)
T ss_pred EEEEEe-------CCceEEEEecCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEE
Confidence 999875 34689999999999999998753 23588999999999999999999987 9999999999999
Q ss_pred ecCCC-------cccccCCCcccccccccccccccccccccCcccccc-CCCCcccceeehhHHHHHHH-hCCCCCCCch
Q 003926 619 LDQNL-------VAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEII-VGRPLKSRKE 689 (786)
Q Consensus 619 ld~~~-------~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~Ell-tG~~p~~~~~ 689 (786)
++..+ .+|++|||++...... ....++..|++||.+.. ..++.++|||||||++|||+ +|+.|+....
T Consensus 150 l~~~~~~~~~~~~~kl~d~g~~~~~~~~---~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~ 226 (274)
T cd05076 150 LARLGLAEGTSPFIKLSDPGVSFTALSR---EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERT 226 (274)
T ss_pred EeccCcccCccceeeecCCccccccccc---cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccC
Confidence 98654 3799999987433221 11234556899998765 46899999999999999995 6899886544
Q ss_pred hHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 003926 690 VDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNL 753 (786)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l 753 (786)
.......... . ... + .. ....+.+++.+||+.+|++||+|.||+++|
T Consensus 227 ~~~~~~~~~~----~----~~~--~---~~----~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 227 PSEKERFYEK----K----HRL--P---EP----SCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred hHHHHHHHHh----c----cCC--C---CC----CChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 3322221110 0 000 0 00 112467888999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-36 Score=312.13 Aligned_cols=243 Identities=19% Similarity=0.307 Sum_probs=189.5
Q ss_pred ccCCCCCceeEEEEec---CCcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEEEE
Q 003926 484 FMGEGSQGQMYRGRLK---NGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIF 559 (786)
Q Consensus 484 ~iG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV~ 559 (786)
.||+|+||.||+|++. ++..||||.+...... ..+.|.+|++++++++|+||++++|+|.. +..++||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~--------~~~~lv~ 73 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA--------EALMLVM 73 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC--------CCeEEEE
Confidence 3899999999999764 3567999998765332 24679999999999999999999998742 3579999
Q ss_pred ecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccccc
Q 003926 560 EYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENA 639 (786)
Q Consensus 560 Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~ 639 (786)
||+++|+|.+++... ...+++..+++++.|+++||.|||+. +++||||||+||+++.++.+|++|||++......
T Consensus 74 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 148 (257)
T cd05115 74 EMASGGPLNKFLSGK--KDEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGAD 148 (257)
T ss_pred EeCCCCCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCC
Confidence 999999999999753 23689999999999999999999997 9999999999999999999999999998644322
Q ss_pred ccc----ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccccccccccc
Q 003926 640 EKV----GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMVDP 714 (786)
Q Consensus 640 ~~~----~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 714 (786)
... ....++..|+|||......++.++|||||||++||+++ |++||...........+.. . .+ +
T Consensus 149 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~----~---~~----~ 217 (257)
T cd05115 149 DSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQ----G---KR----L 217 (257)
T ss_pred ccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHC----C---CC----C
Confidence 111 11112346899999888889999999999999999996 9999876544332222111 0 00 1
Q ss_pred cccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 715 AVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 715 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
.....+ ..++.+++.+||..+|++||++.+|.+.+.
T Consensus 218 ~~~~~~----~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~ 253 (257)
T cd05115 218 DCPAEC----PPEMYALMKDCWIYKWEDRPNFAKVEERMR 253 (257)
T ss_pred CCCCCC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 111112 245667888999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-36 Score=318.47 Aligned_cols=266 Identities=17% Similarity=0.264 Sum_probs=199.4
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
++|+..+.||+|+||.||+|+.+ +|+.||+|++..... ...+.|.+|++++++++|+||+++++++.. ..
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-------~~ 73 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRR-------KR 73 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEee-------CC
Confidence 35778899999999999999975 689999999875432 234568899999999999999999998865 45
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++||||++++.|..++... ..+++..+..++.|+++||.|||+. +++||||||+||+++.++.+||+|||++
T Consensus 74 ~~~~v~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~ 147 (286)
T cd07847 74 KLHLVFEYCDHTVLNELEKNP---RGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFA 147 (286)
T ss_pred EEEEEEeccCccHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccc
Confidence 689999999999998887542 3589999999999999999999997 9999999999999999999999999998
Q ss_pred ccccccc-ccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccc----
Q 003926 634 LLAENAE-KVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESA---- 707 (786)
Q Consensus 634 ~~~~~~~-~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~---- 707 (786)
....... ......++..|++||.... ..++.++|||||||++|||++|++||...........+..........
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (286)
T cd07847 148 RILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQI 227 (286)
T ss_pred eecCCCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhh
Confidence 6554322 2222345567899998765 458899999999999999999999997544322211111111100000
Q ss_pred ------ccccccccccc-----cCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 708 ------RRSMVDPAVNK-----ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 708 ------~~~~~d~~~~~-----~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
......+.... .........+.+++.+||+.+|++||++.|++.|+||
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 228 FSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred cccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 00000010000 0011123467789999999999999999999988764
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=309.87 Aligned_cols=248 Identities=21% Similarity=0.380 Sum_probs=196.9
Q ss_pred cCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~ 556 (786)
.+|...+.||+|+||.||+|..+ |..||+|.++... ..+.|.+|+.++++++|+|+++++|++... .+..+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------~~~~~ 76 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEE------KGGLY 76 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcC------CCceE
Confidence 36777899999999999999865 7889999886432 356799999999999999999999986531 34579
Q ss_pred EEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccc
Q 003926 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636 (786)
Q Consensus 557 LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~ 636 (786)
+||||+++|+|.+++.+.. ...+++..++.++.+++.||+|||+. +++||||||+||++++++.+|++|||++...
T Consensus 77 lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~ 152 (256)
T cd05082 77 IVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEA 152 (256)
T ss_pred EEEECCCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceec
Confidence 9999999999999997542 23588999999999999999999997 9999999999999999999999999998644
Q ss_pred ccccccccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccccccccccc
Q 003926 637 ENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPA 715 (786)
Q Consensus 637 ~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 715 (786)
.... ........|++||......++.++|||||||++|||++ |+.|+.......+...+.. . . .+.
T Consensus 153 ~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~----~--~-----~~~ 219 (256)
T cd05082 153 SSTQ--DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK----G--Y-----KMD 219 (256)
T ss_pred cccC--CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhc----C--C-----CCC
Confidence 3221 12223356899999888889999999999999999998 9999876544333222211 0 0 011
Q ss_pred ccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 716 VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 716 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
.. +.....+.+++.+||+.+|++|||+.+++++|.
T Consensus 220 ~~----~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 254 (256)
T cd05082 220 AP----DGCPPVVYDVMKQCWHLDAATRPSFLQLREQLE 254 (256)
T ss_pred CC----CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHh
Confidence 11 112345678888999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-36 Score=318.90 Aligned_cols=254 Identities=17% Similarity=0.314 Sum_probs=203.3
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
.+|+..+.||.|+||.||+|+. .+|+.||+|.+........+.+.+|+++++.++||||+++++++.. .+..
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-------~~~~ 91 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLV-------GDEL 91 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEec-------CceE
Confidence 3577889999999999999985 5789999999976655556788999999999999999999998865 4568
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
++||||+++|+|.+++.. ..+++.++..++.+++.|++|||+. +++||||||+||+++.++.+||+|||++..
T Consensus 92 ~lv~e~~~~~~L~~~~~~----~~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~ 164 (296)
T cd06655 92 FVVMEYLAGGSLTDVVTE----TCMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQ 164 (296)
T ss_pred EEEEEecCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchh
Confidence 999999999999999864 2589999999999999999999997 999999999999999999999999999764
Q ss_pred cccccc-cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccc
Q 003926 636 AENAEK-VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDP 714 (786)
Q Consensus 636 ~~~~~~-~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 714 (786)
...... .....++..|++||......++.++|||||||++|||++|++||...+.......+. ... ......
T Consensus 165 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~---~~~---~~~~~~- 237 (296)
T cd06655 165 ITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIA---TNG---TPELQN- 237 (296)
T ss_pred cccccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---hcC---CcccCC-
Confidence 432221 222345678999999888889999999999999999999999997654322111111 000 000001
Q ss_pred cccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 715 AVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 715 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
+......+.+++.+||..||++||++.+|+.|.|+..
T Consensus 238 ------~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~ 274 (296)
T cd06655 238 ------PEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKL 274 (296)
T ss_pred ------cccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhh
Confidence 1112234667888999999999999999999999874
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-36 Score=330.75 Aligned_cols=255 Identities=19% Similarity=0.332 Sum_probs=195.9
Q ss_pred HhcCCCccCccCCCCCceeEEEEec------CCcEEEEEEecccCCC-ChHHHHHHHHHHhcCC-CCCcceeeeeeeecc
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKCH-STRNFMHHIELISKLR-HRHLVSALGHCFECY 546 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~-H~NIv~l~g~~~~~~ 546 (786)
..++|...+.||+|+||.||+|+++ .+..||||+++..... ..+.|.+|++++.++. |||||+++|+|..
T Consensus 35 ~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~-- 112 (401)
T cd05107 35 PRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTK-- 112 (401)
T ss_pred cHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEcc--
Confidence 3445677899999999999999863 3468999999865332 2457999999999997 9999999999865
Q ss_pred ccCCCCceEEEEEecCCCCChhHHhhcCCC--------------------------------------------------
Q 003926 547 FDDSSVSRIFLIFEYVPNGTLRSWISEGHA-------------------------------------------------- 576 (786)
Q Consensus 547 ~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~-------------------------------------------------- 576 (786)
.+..++||||+++|+|.++++....
T Consensus 113 -----~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (401)
T cd05107 113 -----GGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESA 187 (401)
T ss_pred -----CCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCcccc
Confidence 3468999999999999999964311
Q ss_pred ---------------------------------------------CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccC
Q 003926 577 ---------------------------------------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNN 611 (786)
Q Consensus 577 ---------------------------------------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrd 611 (786)
...++|...+.++.|+++||+|||+. +++|||
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrd 264 (401)
T cd05107 188 DYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRD 264 (401)
T ss_pred CccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCccc
Confidence 12478888999999999999999987 999999
Q ss_pred CCCCceeecCCCcccccCCCcccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCC
Q 003926 612 LKITDILLDQNLVAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSR 687 (786)
Q Consensus 612 lk~~NILld~~~~~kl~DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~ 687 (786)
|||+|||+++++.+|++|||+++....... .....++..|++||......++.++|||||||++|||++ |+.|+..
T Consensus 265 lkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~ 344 (401)
T cd05107 265 LAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPE 344 (401)
T ss_pred CCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCC
Confidence 999999999999999999999865422111 112234567999999888889999999999999999998 8888865
Q ss_pred chhHH-HHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 688 KEVDL-LKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 688 ~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
..... ....+ ... . . +..+.. ....+.+++.+||+.+|.+||+++||+..|.
T Consensus 345 ~~~~~~~~~~~----~~~---~-~---~~~p~~----~~~~l~~li~~cl~~~P~~RPs~~ell~~L~ 397 (401)
T cd05107 345 LPMNEQFYNAI----KRG---Y-R---MAKPAH----ASDEIYEIMQKCWEEKFEIRPDFSQLVHLVG 397 (401)
T ss_pred CCchHHHHHHH----HcC---C-C---CCCCCC----CCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 33221 11111 100 0 0 011111 1235678888999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-36 Score=316.56 Aligned_cols=259 Identities=19% Similarity=0.331 Sum_probs=201.0
Q ss_pred CCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
+|+..+.||+|+||.||+|..+ +|..||+|.++.... .....|.+|++++++++|+||+++++++.. .+..
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-------~~~~ 74 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFI-------EGAV 74 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheec-------CCeE
Confidence 5677899999999999999965 789999998875422 224679999999999999999999998764 4568
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
++||||+++++|..++........+++.....++.+++.||.|||+. .+|+||||||+||+++.++.+||+|||++..
T Consensus 75 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 152 (286)
T cd06622 75 YMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEE--HNIIHRDVKPTNVLVNGNGQVKLCDFGVSGN 152 (286)
T ss_pred EEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhc--CCEeeCCCCHHHEEECCCCCEEEeecCCccc
Confidence 99999999999999987643334689999999999999999999963 2899999999999999999999999999854
Q ss_pred cccccccccccccccccCccccccC------CCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 636 AENAEKVGHVIPYSGSIDPTNSARG------KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 636 ~~~~~~~~~~~~~~~~~aPe~~~~~------~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
..... .....++..|++||..... .++.++|||||||++|||++|+.||...........+.......
T Consensus 153 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~----- 226 (286)
T cd06622 153 LVASL-AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGD----- 226 (286)
T ss_pred ccCCc-cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcC-----
Confidence 42221 1223455679999987543 35889999999999999999999997543322222221111110
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
.+.+ +......+.+++.+||+.+|++||++.|++.++|+...
T Consensus 227 ---~~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~ 268 (286)
T cd06622 227 ---PPTL----PSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKY 268 (286)
T ss_pred ---CCCC----CcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhc
Confidence 1111 11233456678889999999999999999999998764
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-36 Score=317.36 Aligned_cols=251 Identities=22% Similarity=0.335 Sum_probs=194.2
Q ss_pred CCccCccCCCCCceeEEEEec------CCcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 479 FDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
|...+.||+|+||.||+|+.. ++..||||+++..... ..+.|.+|+.++++++|||||++++++..
T Consensus 7 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~------- 79 (283)
T cd05091 7 VRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTK------- 79 (283)
T ss_pred HHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-------
Confidence 555688999999999999853 2578999999754322 24568999999999999999999998865
Q ss_pred CceEEEEEecCCCCChhHHhhcCC-------------CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCcee
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGH-------------AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDIL 618 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~-------------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NIL 618 (786)
.+..++++||+++++|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+||+
T Consensus 80 ~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil 156 (283)
T cd05091 80 EQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVL 156 (283)
T ss_pred CCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheE
Confidence 345899999999999999985321 123588999999999999999999987 9999999999999
Q ss_pred ecCCCcccccCCCcccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHH
Q 003926 619 LDQNLVAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLK 694 (786)
Q Consensus 619 ld~~~~~kl~DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~ 694 (786)
+++++.+||+|||+++....... .....++..|+|||....+.++.++|||||||++|||++ |.+|+.........
T Consensus 157 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~ 236 (283)
T cd05091 157 VFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVI 236 (283)
T ss_pred ecCCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 99999999999999865432211 112233457999999888889999999999999999998 88888765433322
Q ss_pred HHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 695 NQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
..+. ... . +.....+ ...+.+++.+||+.+|++||++.||+..+.
T Consensus 237 ~~i~---~~~---~-----~~~~~~~----~~~~~~li~~cl~~~p~~RP~~~~i~~~l~ 281 (283)
T cd05091 237 EMIR---NRQ---V-----LPCPDDC----PAWVYTLMLECWNEFPSRRPRFKDIHSRLR 281 (283)
T ss_pred HHHH---cCC---c-----CCCCCCC----CHHHHHHHHHHhCCCcccCCCHHHHHHHhh
Confidence 2211 110 0 0111122 234678888999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-36 Score=347.50 Aligned_cols=266 Identities=19% Similarity=0.302 Sum_probs=200.4
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC---ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH---STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~---~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|+..+.||+|+||.||+|+.. +|+.||||++...... ..+.|.+|++++++++|||||++++++.. .
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d-------~ 74 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSD-------G 74 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEee-------C
Confidence 46888899999999999999964 6899999999754322 24579999999999999999999998865 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCC--------CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGH--------AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV 624 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~--------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~ 624 (786)
+..++||||+++|+|.+++.... ....+++...+.++.|+++||+|||+. +|+||||||+||+++.++.
T Consensus 75 ~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~ 151 (932)
T PRK13184 75 DPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGE 151 (932)
T ss_pred CEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCC
Confidence 56899999999999999986421 123467888899999999999999997 9999999999999999999
Q ss_pred ccccCCCccccccccc-------------------ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCC
Q 003926 625 AKISSYNLPLLAENAE-------------------KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLK 685 (786)
Q Consensus 625 ~kl~DfGl~~~~~~~~-------------------~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~ 685 (786)
+||+|||+++...... ......++..|+|||...+..++.++|||||||++|||+||++||
T Consensus 152 vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF 231 (932)
T PRK13184 152 VVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPY 231 (932)
T ss_pred EEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCC
Confidence 9999999986541100 011235778899999998888999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCC-HHHHHHHHHHHHHhhhhhc
Q 003926 686 SRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPS-VEDVLWNLQFAAQVQDAWH 764 (786)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt-~~evl~~l~~~~~~~~~~~ 764 (786)
........... . .+.++.... ...+....+.+++.+|++.||++||+ ++++.+.+....+....|.
T Consensus 232 ~~~~~~ki~~~--~----------~i~~P~~~~-p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~~p~w~ 298 (932)
T PRK13184 232 RRKKGRKISYR--D----------VILSPIEVA-PYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQGSPEWT 298 (932)
T ss_pred CCcchhhhhhh--h----------hccChhhcc-ccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcCcccc
Confidence 76432221100 0 000110000 00122235667888999999999965 6666666654444444444
Q ss_pred c
Q 003926 765 S 765 (786)
Q Consensus 765 ~ 765 (786)
.
T Consensus 299 ~ 299 (932)
T PRK13184 299 V 299 (932)
T ss_pred c
Confidence 3
|
|
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=311.49 Aligned_cols=256 Identities=16% Similarity=0.270 Sum_probs=198.6
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|+..+.||+|+||.||+|+.. +++.||||.+..... .....|.+|++++++++||||+++++++.. .
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~ 74 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIE-------D 74 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEE-------C
Confidence 46888899999999999999954 789999998864322 223568999999999999999999998765 3
Q ss_pred ceEEEEEecCCCCChhHHhhcCC-CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGH-AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
+..++||||+++|+|.+++.... ....++......++.|+++||+|||+. +++||||||+||+++.++.++++|||
T Consensus 75 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g 151 (267)
T cd08228 75 NELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred CeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccc
Confidence 56899999999999999886421 224578889999999999999999997 99999999999999999999999999
Q ss_pred cccccccccc-cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 632 LPLLAENAEK-VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 632 l~~~~~~~~~-~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
++........ .....++..|+|||......++.++||||||+++|||++|+.|+....... .........
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~-~~~~~~~~~-------- 222 (267)
T cd08228 152 LGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL-FSLCQKIEQ-------- 222 (267)
T ss_pred cceeccchhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccH-HHHHHHHhc--------
Confidence 9865432211 112345567999999888889999999999999999999999986433211 111111100
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
...+... .......+.+++.+||+.+|++||++.||++.+.
T Consensus 223 ~~~~~~~---~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~ 263 (267)
T cd08228 223 CDYPPLP---TEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAK 263 (267)
T ss_pred CCCCCCC---hhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHH
Confidence 0011111 1122345778888999999999999999999886
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=343.53 Aligned_cols=274 Identities=14% Similarity=0.187 Sum_probs=198.9
Q ss_pred HHHHHHhcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCC------Ccceeeeee
Q 003926 470 EELEEATNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHR------HLVSALGHC 542 (786)
Q Consensus 470 ~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~------NIv~l~g~~ 542 (786)
+++...+++|++.+.||+|+||+||+|.. .+++.||||+++... ...+++..|++++++++|. +++++++++
T Consensus 122 ~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~ 200 (467)
T PTZ00284 122 EDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF 200 (467)
T ss_pred CccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence 44555678899999999999999999985 468899999996432 2234566777777776554 578888776
Q ss_pred eeccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCC
Q 003926 543 FECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN 622 (786)
Q Consensus 543 ~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~ 622 (786)
.. ...+.|+||||+ +++|.+++.+. ..+++.....|+.|++.||+|||+. .+||||||||+|||++.+
T Consensus 201 ~~------~~~~~~iv~~~~-g~~l~~~l~~~---~~l~~~~~~~i~~qi~~aL~yLH~~--~gIiHrDlKP~NILl~~~ 268 (467)
T PTZ00284 201 QN------ETGHMCIVMPKY-GPCLLDWIMKH---GPFSHRHLAQIIFQTGVALDYFHTE--LHLMHTDLKPENILMETS 268 (467)
T ss_pred Ec------CCceEEEEEecc-CCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhc--CCeecCCCCHHHEEEecC
Confidence 53 135689999998 67899988753 3689999999999999999999973 289999999999999876
Q ss_pred C----------------cccccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCC
Q 003926 623 L----------------VAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKS 686 (786)
Q Consensus 623 ~----------------~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~ 686 (786)
+ .+||+|||.+..... ......++..|+|||.+.+..|+.++|||||||++|||+||++||+
T Consensus 269 ~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~--~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~ 346 (467)
T PTZ00284 269 DTVVDPVTNRALPPDPCRVRICDLGGCCDERH--SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYD 346 (467)
T ss_pred CcccccccccccCCCCceEEECCCCccccCcc--ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 5 489999998754322 2233467789999999988899999999999999999999999997
Q ss_pred CchhHHHHHHHHHHHHhccc-------------------ccccccccccc----c-cCcH--HHHHHHHHHHHHhccCCC
Q 003926 687 RKEVDLLKNQLQAVVTADES-------------------ARRSMVDPAVN----K-ACLD--ESLKTMMEVCVRCLLKNP 740 (786)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~d~~~~----~-~~~~--~~~~~~~~l~~~Cl~~dP 740 (786)
..+.......+......... ......++... . .... .....+.+++.+||+.||
T Consensus 347 ~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP 426 (467)
T PTZ00284 347 THDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDR 426 (467)
T ss_pred CCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcCh
Confidence 65432222222111100000 00000111000 0 0000 012356789999999999
Q ss_pred CCCCCHHHHHHHHHHHHH
Q 003926 741 AERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 741 ~~RPt~~evl~~l~~~~~ 758 (786)
++|||++|+++|+|+.+.
T Consensus 427 ~~R~ta~e~L~Hp~~~~~ 444 (467)
T PTZ00284 427 QKRLNARQMTTHPYVLKY 444 (467)
T ss_pred hhCCCHHHHhcCcccccc
Confidence 999999999999998753
|
|
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-36 Score=313.30 Aligned_cols=253 Identities=21% Similarity=0.354 Sum_probs=201.2
Q ss_pred hcCCCccCccCCCCCceeEEEEecC-CcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLKN-GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
.++|+..+.||+|+||.||+|+..+ +..||+|.+..... .++|.+|++++++++|+||++++|++.. ...
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~-------~~~ 72 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFK-------NTD 72 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeec-------CCc
Confidence 3578888999999999999999764 88999999875532 6789999999999999999999998865 356
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.|+++||+++++|.+++... ...+++.....++.|++.||.|||+. +++||||+|+||+++.++.+||+|||++.
T Consensus 73 ~~l~~e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~ 147 (256)
T cd06612 73 LWIVMEYCGAGSVSDIMKIT--NKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSG 147 (256)
T ss_pred EEEEEecCCCCcHHHHHHhC--ccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccch
Confidence 89999999999999999753 24689999999999999999999997 99999999999999999999999999986
Q ss_pred cccccc-ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccccc
Q 003926 635 LAENAE-KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVD 713 (786)
Q Consensus 635 ~~~~~~-~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 713 (786)
...... ......++..|++||...+..++.++|||||||++|||++|++|+...........+ .. ...
T Consensus 148 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~------~~-----~~~ 216 (256)
T cd06612 148 QLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMI------PN-----KPP 216 (256)
T ss_pred hcccCccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhh------cc-----CCC
Confidence 543322 222334566799999988888999999999999999999999998754322111000 00 000
Q ss_pred ccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 714 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
+.. ..+......+.+++.+||+.+|++|||+.||+.|.|+
T Consensus 217 ~~~--~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 217 PTL--SDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred CCC--CchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 000 0111122456788889999999999999999988763
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=308.27 Aligned_cols=244 Identities=21% Similarity=0.385 Sum_probs=192.4
Q ss_pred CccCCCCCceeEEEEecCCcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEEEEec
Q 003926 483 AFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEY 561 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV~Ey 561 (786)
++||+|+||.||+|..+++..||+|.+...... ....|.+|++++++++||||++++++|.. .+..++||||
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~~~~lv~e~ 73 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQ-------RQPIYIVMEL 73 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEec-------CCccEEEEEC
Confidence 368999999999999888899999998754322 23468999999999999999999998864 3458999999
Q ss_pred CCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccccccc
Q 003926 562 VPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEK 641 (786)
Q Consensus 562 ~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~~ 641 (786)
+++|+|.+++.... ..+++..+..++.+++.||.|+|+. +++||||||+||+++.++.+|++|||++........
T Consensus 74 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~ 148 (250)
T cd05085 74 VPGGDFLSFLRKKK--DELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIY 148 (250)
T ss_pred CCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceecccccc
Confidence 99999999987532 3588999999999999999999987 999999999999999999999999999854332211
Q ss_pred c--ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccccccccccccccc
Q 003926 642 V--GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNK 718 (786)
Q Consensus 642 ~--~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 718 (786)
. ........|++||....+.++.++|||||||++||+++ |..||...........+.. . .+ ...
T Consensus 149 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~----~---~~----~~~-- 215 (250)
T cd05085 149 SSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEK----G---YR----MSC-- 215 (250)
T ss_pred ccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHc----C---CC----CCC--
Confidence 1 11122346899999988889999999999999999998 9999875543322221110 0 00 001
Q ss_pred cCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 003926 719 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNL 753 (786)
Q Consensus 719 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l 753 (786)
+......+.+++.+||+.+|++||++.|+++.+
T Consensus 216 --~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l 248 (250)
T cd05085 216 --PQKCPDDVYKVMQRCWDYKPENRPKFSELQKEL 248 (250)
T ss_pred --CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHh
Confidence 111234677899999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-36 Score=328.64 Aligned_cols=264 Identities=16% Similarity=0.224 Sum_probs=193.4
Q ss_pred HhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
...+|...+.||+|+||.||+|+.. ++..||+|..... ....|+.++++++|+|||++++++.. ..
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~-------~~ 130 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVS-------GA 130 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEe-------CC
Confidence 3457999999999999999999965 5789999974322 24579999999999999999999875 35
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++||||+. |+|.+++... ...++|..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 131 ~~~lv~e~~~-~~l~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a 204 (357)
T PHA03209 131 ITCMVLPHYS-SDLYTYLTKR--SRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAA 204 (357)
T ss_pred eeEEEEEccC-CcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCccc
Confidence 6899999995 6999988653 24689999999999999999999997 9999999999999999999999999998
Q ss_pred cccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCC-CCCCCchhH----------HHHHHHHHHHH
Q 003926 634 LLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVD----------LLKNQLQAVVT 702 (786)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~-~p~~~~~~~----------~~~~~~~~~~~ 702 (786)
.............++..|+|||.+....++.++|||||||++|||+++. ++|...... .+...+.....
T Consensus 205 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~ 284 (357)
T PHA03209 205 QFPVVAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKV 284 (357)
T ss_pred cccccCcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhcc
Confidence 6543332333445778899999998888999999999999999999864 444331110 11111111000
Q ss_pred hccccc--------ccccc-------ccccccCc--HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 703 ADESAR--------RSMVD-------PAVNKACL--DESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 703 ~~~~~~--------~~~~d-------~~~~~~~~--~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
...... ....+ +.....+. ........+++.+||+.||++|||+.||++|+||.+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~ 356 (357)
T PHA03209 285 HPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ 356 (357)
T ss_pred ChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence 000000 00000 00000000 011223456888999999999999999999999864
|
|
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-36 Score=337.36 Aligned_cols=261 Identities=17% Similarity=0.224 Sum_probs=203.0
Q ss_pred CCCccCccCCCCCceeEEEEecCC-cEEEEEEecccCCCChHHHHHHHHHHhcCC-CCCcceeeeeeeeccccCCCCceE
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLKNG-TFVAIRCLKMKKCHSTRNFMHHIELISKLR-HRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~~g-~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
...+.+.|.+|||+.||.|+...+ ..||+|++-..+....+...+||++|++|+ |+|||.|++........+.+.-+.
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Ev 117 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEV 117 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEE
Confidence 345678999999999999997654 999999998776667788999999999997 999999999432211112223578
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
+|.||||++|+|-+++..+. ...|+..+.++|+.|+++|+++||. +.|+|||||||.+||||+.++..||||||-+.-
T Consensus 118 llLmEyC~gg~Lvd~mn~Rl-q~~lte~eVLkIf~dv~~AVa~mH~-~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt 195 (738)
T KOG1989|consen 118 LLLMEYCKGGSLVDFMNTRL-QTRLTEDEVLKIFYDVCEAVAAMHY-LKPPIIHRDLKIENVLLSADGNYKLCDFGSATT 195 (738)
T ss_pred EeehhhccCCcHHHHHHHHH-hccCChHHHHHHHHHHHHHHHHHhc-CCCccchhhhhhhheEEcCCCCEEeCccccccc
Confidence 99999999999999998643 3459999999999999999999998 688999999999999999999999999999742
Q ss_pred ccc-c-cc--------cccccccccccCcccc---ccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHH
Q 003926 636 AEN-A-EK--------VGHVIPYSGSIDPTNS---ARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVT 702 (786)
Q Consensus 636 ~~~-~-~~--------~~~~~~~~~~~aPe~~---~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~ 702 (786)
... . .. .-....|+-|.+||.+ .+..+++|+|||++||+||-|+....||+....-.
T Consensus 196 ~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~la---------- 265 (738)
T KOG1989|consen 196 KILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLA---------- 265 (738)
T ss_pred ccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCccee----------
Confidence 211 1 10 0112356789999975 34468999999999999999999999997642211
Q ss_pred hccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 703 ADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 703 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
+++-...-...+.....+.+||..||+.||.+||++-||+.++.....
T Consensus 266 --------Ilng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~ 313 (738)
T KOG1989|consen 266 --------ILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELAN 313 (738)
T ss_pred --------EEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhc
Confidence 111111111123445678889999999999999999999999886654
|
|
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-36 Score=317.75 Aligned_cols=254 Identities=16% Similarity=0.307 Sum_probs=197.4
Q ss_pred CCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEE
Q 003926 479 FDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFL 557 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~L 557 (786)
|+..+.||+|+||.||+|... ++..+|+|.+........+.|.+|+++++.++||||+++++++.. .+..++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~-------~~~~~~ 79 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYY-------ENNLWI 79 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEee-------CCEEEE
Confidence 445678999999999999965 588899999876544445679999999999999999999998865 356899
Q ss_pred EEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccc
Q 003926 558 IFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637 (786)
Q Consensus 558 V~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~ 637 (786)
||||+++|+|..++.+. ...+++..+..++.|+++||.|||+. +++||||||+||+++.++.+|++|||++....
T Consensus 80 v~e~~~~~~l~~~~~~~--~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~ 154 (282)
T cd06643 80 LIEFCAGGAVDAVMLEL--ERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNT 154 (282)
T ss_pred EEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEcccccccccc
Confidence 99999999999988653 23689999999999999999999997 99999999999999999999999999985432
Q ss_pred cc-cccccccccccccCccccc-----cCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 638 NA-EKVGHVIPYSGSIDPTNSA-----RGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 638 ~~-~~~~~~~~~~~~~aPe~~~-----~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
.. .......++..|++||.+. ...++.++|||||||++|||++|++|+............ .... ....
T Consensus 155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~---~~~~---~~~~ 228 (282)
T cd06643 155 RTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKI---AKSE---PPTL 228 (282)
T ss_pred ccccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHH---hhcC---CCCC
Confidence 21 1222334667899999863 345788999999999999999999998754322211111 1100 0011
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
..+ ......+.+++.+||+.+|.+||++.++++|+|+..
T Consensus 229 ~~~-------~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 267 (282)
T cd06643 229 AQP-------SRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTV 267 (282)
T ss_pred CCc-------cccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEec
Confidence 111 111235678888999999999999999999988664
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-36 Score=316.33 Aligned_cols=253 Identities=22% Similarity=0.351 Sum_probs=195.5
Q ss_pred CCCccCccCCCCCceeEEEEec------CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
+|...+.||+|+||.||+|+.. ....||+|.+..... ...+++.+|++++++++||||++++++|..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------ 74 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQ------ 74 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEec------
Confidence 3667889999999999999853 235789998875432 224578999999999999999999998764
Q ss_pred CCceEEEEEecCCCCChhHHhhcCC---------------------CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccc
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGH---------------------AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFS 609 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~---------------------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivH 609 (786)
.+..++||||+++|+|.+++.... ....+++.+.+.++.|++.||.|||+. +++|
T Consensus 75 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH 150 (290)
T cd05045 75 -DGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVH 150 (290)
T ss_pred -CCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceeh
Confidence 345799999999999999986421 113588999999999999999999987 9999
Q ss_pred cCCCCCceeecCCCcccccCCCcccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCC
Q 003926 610 NNLKITDILLDQNLVAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLK 685 (786)
Q Consensus 610 rdlk~~NILld~~~~~kl~DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~ 685 (786)
|||||+||++++++.+||+|||+++....... .....++..|++||......++.++||||||+++|||+| |+.|+
T Consensus 151 ~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~ 230 (290)
T cd05045 151 RDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY 230 (290)
T ss_pred hhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCC
Confidence 99999999999999999999999864422211 111223456899998888889999999999999999999 99998
Q ss_pred CCchhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 686 SRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
.......+...+.. . . ...... .....+.+++.+||+.+|++||+++|+++.+..
T Consensus 231 ~~~~~~~~~~~~~~----~---~----~~~~~~----~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~ 285 (290)
T cd05045 231 PGIAPERLFNLLKT----G---Y----RMERPE----NCSEEMYNLMLTCWKQEPDKRPTFADISKELEK 285 (290)
T ss_pred CCCCHHHHHHHHhC----C---C----CCCCCC----CCCHHHHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence 76554433322211 0 0 001111 122356788899999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-36 Score=321.58 Aligned_cols=255 Identities=16% Similarity=0.270 Sum_probs=211.4
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCC---hHHHHHHHHHHhcCC-CCCcceeeeeeeeccccCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHS---TRNFMHHIELISKLR-HRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~---~~~f~~E~~~l~~l~-H~NIv~l~g~~~~~~~~~~ 550 (786)
...|+..+.||+|.||.||+++.+ +|+.+|+|.+.+..... .....+|+++|+++. |||||.+.+.+..
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~------ 107 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFED------ 107 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEc------
Confidence 345777899999999999999966 59999999998776543 357899999999998 9999999998875
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCC----Cccc
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN----LVAK 626 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~----~~~k 626 (786)
....++|||+|.+|.|.+.|... .++......++.|++.++.|||+. +|+|||+||+|+|+... +.+|
T Consensus 108 -~~~~~lvmEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik 179 (382)
T KOG0032|consen 108 -PDSVYLVMELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIK 179 (382)
T ss_pred -CCeEEEEEEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEE
Confidence 45789999999999999999764 288999999999999999999997 99999999999998644 4799
Q ss_pred ccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccc
Q 003926 627 ISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADES 706 (786)
Q Consensus 627 l~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (786)
++|||++............+|+++|+|||......|+..+||||.||++|.|++|.+||...........+.. .
T Consensus 180 ~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~---~--- 253 (382)
T KOG0032|consen 180 LIDFGLAKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILR---G--- 253 (382)
T ss_pred EeeCCCceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHc---C---
Confidence 9999999877766667778899999999999888999999999999999999999999987654333221111 0
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
+........+.....+.+++..++..||.+|+|+.++++|+|..
T Consensus 254 ------~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~ 297 (382)
T KOG0032|consen 254 ------DFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIK 297 (382)
T ss_pred ------CCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCcccc
Confidence 01122222333445667888899999999999999999998844
|
|
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-36 Score=313.68 Aligned_cols=252 Identities=21% Similarity=0.367 Sum_probs=196.1
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CC---cEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NG---TFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g---~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
.++|+..+.||+|+||.||+|+.+ ++ ..+|+|.++.... ...+.|.+|++++++++|+||+++.+++..
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 77 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTK------ 77 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEcc------
Confidence 346777899999999999999865 33 3799999875432 234679999999999999999999998864
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
.+..++||||+++|+|.+++.+.. ..+++.++..++.|++.|++|||+. +++||||||+||++++++.+|++||
T Consensus 78 -~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~df 151 (268)
T cd05063 78 -FKPAMIITEYMENGALDKYLRDHD--GEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDF 151 (268)
T ss_pred -CCCcEEEEEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCC
Confidence 346899999999999999997532 3589999999999999999999997 9999999999999999999999999
Q ss_pred Ccccccccccccc----cccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcc
Q 003926 631 NLPLLAENAEKVG----HVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADE 705 (786)
Q Consensus 631 Gl~~~~~~~~~~~----~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 705 (786)
|++.......... .......|++||......++.++|||||||++|||++ |+.|+...........+.. .
T Consensus 152 g~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~----~- 226 (268)
T cd05063 152 GLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAIND----G- 226 (268)
T ss_pred ccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhc----C-
Confidence 9986443221111 1111235899999888889999999999999999998 9999865443332222211 0
Q ss_pred ccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 706 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
. . .+. .......+.+++.+||+.+|++||++.+|++.+.
T Consensus 227 -~--~--~~~-----~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~ 265 (268)
T cd05063 227 -F--R--LPA-----PMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLD 265 (268)
T ss_pred -C--C--CCC-----CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 0 0 000 1112345678999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-36 Score=323.81 Aligned_cols=250 Identities=20% Similarity=0.269 Sum_probs=193.2
Q ss_pred CccCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCCCCceEEE
Q 003926 483 AFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSSVSRIFL 557 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~~~~~~~L 557 (786)
+.||+|+||+||+|+.. +++.||||+++.... ...+.+.+|+.++.++ +||||+++++++.. .+..|+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~-------~~~~~l 73 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQT-------TSRLFL 73 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEe-------CCEEEE
Confidence 46999999999999964 688999999986532 2235688999999888 69999999998764 456899
Q ss_pred EEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccc
Q 003926 558 IFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637 (786)
Q Consensus 558 V~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~ 637 (786)
||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 74 v~e~~~~~~L~~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~ 147 (327)
T cd05617 74 VIEYVNGGDLMFHMQRQ---RKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGL 147 (327)
T ss_pred EEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceecc
Confidence 99999999999988653 3589999999999999999999997 99999999999999999999999999986432
Q ss_pred -cccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhH---HHHHHHHHHHHhcccccccccc
Q 003926 638 -NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVD---LLKNQLQAVVTADESARRSMVD 713 (786)
Q Consensus 638 -~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~d 713 (786)
.........++..|+|||......++.++|||||||++|||++|++||...... .....+........
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-------- 219 (327)
T cd05617 148 GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKP-------- 219 (327)
T ss_pred CCCCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCC--------
Confidence 222223445778899999998888999999999999999999999999532110 11111111111110
Q ss_pred ccccccCcHHHHHHHHHHHHHhccCCCCCCCC------HHHHHHHHHHHH
Q 003926 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPS------VEDVLWNLQFAA 757 (786)
Q Consensus 714 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt------~~evl~~l~~~~ 757 (786)
..++.. ....+.+++.+||+.||++||+ +.++..|.||..
T Consensus 220 ~~~p~~----~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~ 265 (327)
T cd05617 220 IRIPRF----LSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRS 265 (327)
T ss_pred CCCCCC----CCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCC
Confidence 011111 1234567888999999999998 579999988764
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=309.15 Aligned_cols=248 Identities=23% Similarity=0.434 Sum_probs=199.8
Q ss_pred cCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~ 556 (786)
++|+..+.||+|+||.||+|... |+.||||.++.... ..+++.+|+.++++++|+||+++++++.. .+..+
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------~~~~~ 76 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQ-------GNPLY 76 (256)
T ss_pred hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcC-------CCCeE
Confidence 46778899999999999999876 78999999976543 46789999999999999999999998764 35689
Q ss_pred EEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccc
Q 003926 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636 (786)
Q Consensus 557 LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~ 636 (786)
+||||+++|+|.+++.... ...++|..+..++.|++.|+.|||+. +++||||||+||+++.++.+||+|||.++..
T Consensus 77 ~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~ 152 (256)
T cd05039 77 IVTEYMAKGSLVDYLRSRG-RAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEA 152 (256)
T ss_pred EEEEecCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEccccccccc
Confidence 9999999999999997543 23689999999999999999999997 9999999999999999999999999998655
Q ss_pred ccccccccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccccccccccc
Q 003926 637 ENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPA 715 (786)
Q Consensus 637 ~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 715 (786)
..... .......|++||....+.++.++||||||+++|||++ |+.|+.......+...+.. . .. +.
T Consensus 153 ~~~~~--~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~----~---~~----~~ 219 (256)
T cd05039 153 SQGQD--SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEK----G---YR----ME 219 (256)
T ss_pred ccccc--cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhc----C---CC----CC
Confidence 32221 2223456899999888889999999999999999997 9999876554433222211 0 00 01
Q ss_pred ccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 716 VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 716 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
... .....+.+++.+||..+|++||++.|++..+.
T Consensus 220 ~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 254 (256)
T cd05039 220 APE----GCPPEVYKVMKDCWELDPAKRPTFKQLREQLA 254 (256)
T ss_pred Ccc----CCCHHHHHHHHHHhccChhhCcCHHHHHHHHh
Confidence 111 12245678889999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-36 Score=324.80 Aligned_cols=257 Identities=22% Similarity=0.364 Sum_probs=195.4
Q ss_pred hcCCCccCccCCCCCceeEEEEe------cCCcEEEEEEecccCCC-ChHHHHHHHHHHhcC-CCCCcceeeeeeeeccc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL------KNGTFVAIRCLKMKKCH-STRNFMHHIELISKL-RHRHLVSALGHCFECYF 547 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~ 547 (786)
.++|+..+.||+|+||.||+|+. .+++.||||+++..... ....+.+|++++.++ +|+|||+++++|...
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~-- 83 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP-- 83 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecC--
Confidence 35688899999999999999973 34789999999754322 245688999999999 689999999988641
Q ss_pred cCCCCceEEEEEecCCCCChhHHhhcCCC---------------------------------------------------
Q 003926 548 DDSSVSRIFLIFEYVPNGTLRSWISEGHA--------------------------------------------------- 576 (786)
Q Consensus 548 ~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~--------------------------------------------------- 576 (786)
....++||||+++|+|.++++....
T Consensus 84 ----~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (343)
T cd05103 84 ----GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLS 159 (343)
T ss_pred ----CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccc
Confidence 3457899999999999999864210
Q ss_pred -------------CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccccccc--
Q 003926 577 -------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEK-- 641 (786)
Q Consensus 577 -------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~~-- 641 (786)
...++|.+...++.|+++||+|||+. +|+||||||+||++++++.+||+|||++........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 236 (343)
T cd05103 160 DVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYV 236 (343)
T ss_pred cchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchh
Confidence 12478889999999999999999997 999999999999999999999999999865422111
Q ss_pred -cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhH-HHHHHHHHHHHhccccccccccccccc
Q 003926 642 -VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVD-LLKNQLQAVVTADESARRSMVDPAVNK 718 (786)
Q Consensus 642 -~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~ 718 (786)
.....++..|++||......++.++|||||||++|||++ |..|+...... ..... .... ... ..+.
T Consensus 237 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~----~~~~--~~~--~~~~--- 305 (343)
T cd05103 237 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR----LKEG--TRM--RAPD--- 305 (343)
T ss_pred hcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHH----Hhcc--CCC--CCCC---
Confidence 111223456899999888889999999999999999997 88888653321 11111 1111 000 0011
Q ss_pred cCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 719 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 719 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
.. ...+.+++.+||+.||++|||+.||++++...
T Consensus 306 ~~----~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~ 339 (343)
T cd05103 306 YT----TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 339 (343)
T ss_pred CC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 11 13467888899999999999999999998744
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-36 Score=314.23 Aligned_cols=256 Identities=21% Similarity=0.339 Sum_probs=203.8
Q ss_pred CCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC-CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK-CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
+|+..+.||.|+||.||+|+.. +++.||+|.+.... ......+.+|++++++++|+||+++++++.+ ....
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~~~ 74 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLK-------GSKL 74 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEE-------CCeE
Confidence 5677889999999999999965 68999999987553 2334678999999999999999999998765 3568
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
++|+||+++|+|.+++... .+++.....++.|++.|+.|||+. +++||||+|+||++++++.++++|||+++.
T Consensus 75 ~~v~e~~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~ 147 (274)
T cd06609 75 WIIMEYCGGGSCLDLLKPG----KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQ 147 (274)
T ss_pred EEEEEeeCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccccccee
Confidence 9999999999999999753 689999999999999999999997 999999999999999999999999999865
Q ss_pred cccc-cccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccc
Q 003926 636 AENA-EKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDP 714 (786)
Q Consensus 636 ~~~~-~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 714 (786)
.... .......++..|++||......++.++|||||||++|||+||++|+...+.......+. .. ..+
T Consensus 148 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~---~~--------~~~ 216 (274)
T cd06609 148 LTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIP---KN--------NPP 216 (274)
T ss_pred ecccccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhh---hc--------CCC
Confidence 5432 12223345667999999988889999999999999999999999986544222111111 00 011
Q ss_pred cccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhhh
Q 003926 715 AVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQD 761 (786)
Q Consensus 715 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~~ 761 (786)
.+... .....+.+++.+||..+|++|||++++++|.|+....+.
T Consensus 217 ~~~~~---~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~~~ 260 (274)
T cd06609 217 SLEGN---KFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAKKT 260 (274)
T ss_pred CCccc---ccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCCCcc
Confidence 11111 022356678889999999999999999999998765443
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-36 Score=316.16 Aligned_cols=250 Identities=19% Similarity=0.340 Sum_probs=197.8
Q ss_pred CCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEE
Q 003926 479 FDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~ 556 (786)
|+..+.||+|+||.||+|... ++..||+|.++.... ...+.+.+|++++++++||||+++++++.. .+..+
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~~~~ 78 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLK-------GTKLW 78 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhccccc-------CCceE
Confidence 445678999999999999854 688999999875432 234578999999999999999999998764 45689
Q ss_pred EEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccc
Q 003926 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636 (786)
Q Consensus 557 LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~ 636 (786)
+||||+++|+|.+++.. ..+++.....++.|+++|+.|||+. +++|+||+|+||++++++.+|++|||++...
T Consensus 79 lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~ 151 (277)
T cd06642 79 IIMEYLGGGSALDLLKP----GPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQL 151 (277)
T ss_pred EEEEccCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccc
Confidence 99999999999999864 3588999999999999999999997 9999999999999999999999999998654
Q ss_pred cccc-ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccccccc
Q 003926 637 ENAE-KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPA 715 (786)
Q Consensus 637 ~~~~-~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 715 (786)
.... ......+...|++||......++.++|||||||++|||+||++|+...........+ ... ..+.
T Consensus 152 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~----~~~-------~~~~ 220 (277)
T cd06642 152 TDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLI----PKN-------SPPT 220 (277)
T ss_pred cCcchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhh----hcC-------CCCC
Confidence 3221 111234566789999998888999999999999999999999998654322211110 000 0111
Q ss_pred ccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 716 VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 716 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.. ......+.+++.+||+.+|++||+|.||++|.|+..
T Consensus 221 ~~----~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 258 (277)
T cd06642 221 LE----GQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITR 258 (277)
T ss_pred CC----cccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHH
Confidence 11 122345678889999999999999999999999764
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=312.20 Aligned_cols=247 Identities=25% Similarity=0.402 Sum_probs=188.9
Q ss_pred CccCCCCCceeEEEEec-CCc--EEEEEEecccCC-CChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCCCCceEEE
Q 003926 483 AFMGEGSQGQMYRGRLK-NGT--FVAIRCLKMKKC-HSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSSVSRIFL 557 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~-~g~--~vAvK~l~~~~~-~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~~~~~~~L 557 (786)
+.||+|+||.||+|+.+ ++. .+|+|.++.... ...+.|.+|+++++++ +||||++++++|.. .+..++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-------~~~~~l 73 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH-------RGYLYL 73 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEec-------CCCceE
Confidence 46899999999999975 343 578888874332 2346789999999999 89999999998865 345799
Q ss_pred EEecCCCCChhHHhhcCC-------------CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCc
Q 003926 558 IFEYVPNGTLRSWISEGH-------------AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV 624 (786)
Q Consensus 558 V~Ey~~~GsL~~~l~~~~-------------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~ 624 (786)
||||+++|+|.+++.... ....+++.++..++.|++.|++|||+. +++||||||+||++++++.
T Consensus 74 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~ 150 (270)
T cd05047 74 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYV 150 (270)
T ss_pred EEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCe
Confidence 999999999999997532 113478999999999999999999987 9999999999999999999
Q ss_pred ccccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHh
Q 003926 625 AKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTA 703 (786)
Q Consensus 625 ~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~ 703 (786)
+|++|||++..............+..|+|||+.....++.++|||||||++|||++ |+.||...........+. .
T Consensus 151 ~kl~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~----~ 226 (270)
T cd05047 151 AKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP----Q 226 (270)
T ss_pred EEECCCCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHh----C
Confidence 99999999753321111111122346899999888889999999999999999997 999986544332221110 0
Q ss_pred ccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 704 DESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 704 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
. ... .... .....+.+++.+||+.+|.+|||+.|+++.+.
T Consensus 227 ~--~~~-----~~~~----~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 266 (270)
T cd05047 227 G--YRL-----EKPL----NCDDEVYDLMRQCWREKPYERPSFAQILVSLN 266 (270)
T ss_pred C--CCC-----CCCC----cCCHHHHHHHHHHcccChhhCCCHHHHHHHHH
Confidence 0 000 0111 12235678899999999999999999998885
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-36 Score=307.68 Aligned_cols=256 Identities=22% Similarity=0.390 Sum_probs=193.3
Q ss_pred CCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhc--CCCCCcceeeeeeeeccccCCCCceE
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISK--LRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~--l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
+....+.||+|.||+||+|+++ |+.||||++... +.+.|.+|.++.+- +||+||+.|++.-.. +..+-.++
T Consensus 212 qI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~sr---dE~SWfrEtEIYqTvmLRHENILgFIaaD~~---~~gs~TQL 284 (513)
T KOG2052|consen 212 QIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSR---DERSWFRETEIYQTVMLRHENILGFIAADNK---DNGSWTQL 284 (513)
T ss_pred eeEEEEEecCccccceeecccc-CCceEEEEeccc---chhhhhhHHHHHHHHHhccchhhhhhhcccc---CCCceEEE
Confidence 4456789999999999999998 889999998654 35678888888775 699999999875321 22344689
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcC-----CCCCccccCCCCCceeecCCCcccccCC
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTG-----IVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~-----~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
|||.||-+.|||+|||.. ..++-...++++..+|.||+|||.. -+|.|.|||||+.|||+..++.+.|+|+
T Consensus 285 wLvTdYHe~GSL~DyL~r----~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADL 360 (513)
T KOG2052|consen 285 WLVTDYHEHGSLYDYLNR----NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 360 (513)
T ss_pred EEeeecccCCcHHHHHhh----ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeec
Confidence 999999999999999975 4689999999999999999999964 3689999999999999999999999999
Q ss_pred Cccccccccc-----ccccccccccccCccccccCC----CC--cccceeehhHHHHHHHhC----------CCCCCCc-
Q 003926 631 NLPLLAENAE-----KVGHVIPYSGSIDPTNSARGK----LE--EKIDIYDFGLILLEIIVG----------RPLKSRK- 688 (786)
Q Consensus 631 Gl~~~~~~~~-----~~~~~~~~~~~~aPe~~~~~~----~t--~ksDVwSfGvvl~ElltG----------~~p~~~~- 688 (786)
|||....... ......||..|||||++.... |. ..+||||||.|+||++.+ ++||.+.
T Consensus 361 GLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~V 440 (513)
T KOG2052|consen 361 GLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVV 440 (513)
T ss_pred eeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCC
Confidence 9996543321 123456888999999875421 21 368999999999999863 3555431
Q ss_pred ----hhHHHHHHHHHHHHhccccccccccccccc-cCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 689 ----EVDLLKNQLQAVVTADESARRSMVDPAVNK-ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 689 ----~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
..++..+.+- . ...+ |.++. ...++.+..+.+++..||..+|+.|-|+--|-+.+.
T Consensus 441 p~DPs~eeMrkVVC----v--~~~R----P~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~ 501 (513)
T KOG2052|consen 441 PSDPSFEEMRKVVC----V--QKLR----PNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLA 501 (513)
T ss_pred CCCCCHHHHhccee----e--cccC----CCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHH
Confidence 1122211110 0 0112 22222 234577888999999999999999999877766664
|
|
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-36 Score=316.33 Aligned_cols=257 Identities=20% Similarity=0.312 Sum_probs=200.8
Q ss_pred hcCCCccCccCCCCCceeEEEEecC-----CcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLKN-----GTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDD 549 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~~-----g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~ 549 (786)
.++|...+.||+|+||.||+|.... +..||+|++..... ...+.+.+|+.++++++|+||++++|++...
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~---- 80 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIED---- 80 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC----
Confidence 4567888999999999999999765 68899998874432 2346689999999999999999999988642
Q ss_pred CCCceEEEEEecCCCCChhHHhhcCCCC-----CCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCc
Q 003926 550 SSVSRIFLIFEYVPNGTLRSWISEGHAH-----QSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV 624 (786)
Q Consensus 550 ~~~~~~~LV~Ey~~~GsL~~~l~~~~~~-----~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~ 624 (786)
....++++||+++|+|.+++...... ..+++.+++.++.|++.||+|||+. +++||||||+||++++++.
T Consensus 81 --~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~ 155 (280)
T cd05043 81 --GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQ 155 (280)
T ss_pred --CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCc
Confidence 34579999999999999999753221 4689999999999999999999987 9999999999999999999
Q ss_pred ccccCCCccccccccccc---ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHH
Q 003926 625 AKISSYNLPLLAENAEKV---GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAV 700 (786)
Q Consensus 625 ~kl~DfGl~~~~~~~~~~---~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~ 700 (786)
+||+|||+++........ ....++..|+|||......++.++|||||||++||+++ |++|+...........+..
T Consensus 156 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~- 234 (280)
T cd05043 156 VKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKD- 234 (280)
T ss_pred EEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHc-
Confidence 999999998654222111 11223456899999888889999999999999999999 9999976544333222111
Q ss_pred HHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 701 VTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 701 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
. . .......+ ...+.+++.+||..||++|||+.||++.+...
T Consensus 235 ---~---~----~~~~~~~~----~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~ 276 (280)
T cd05043 235 ---G---Y----RLAQPINC----PDELFAVMACCWALDPEERPSFSQLVQCLTDF 276 (280)
T ss_pred ---C---C----CCCCCCcC----CHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 0 0 00011112 23567888999999999999999999988643
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-36 Score=318.70 Aligned_cols=254 Identities=16% Similarity=0.291 Sum_probs=202.3
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
.+|...+.||+|+||.||+|.. .+++.||+|.+........+.+.+|+.+++.++|+||+++++++.. .+..
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-------~~~~ 91 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV-------GDEL 91 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEec-------CCEE
Confidence 5678889999999999999995 5799999999976655556778999999999999999999998865 4568
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
++||||+++|+|.+++.+ ..+++.++..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++..
T Consensus 92 ~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~ 164 (297)
T cd06656 92 WVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQ 164 (297)
T ss_pred EEeecccCCCCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceE
Confidence 999999999999999864 2478999999999999999999997 999999999999999999999999999865
Q ss_pred cccccc-cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccc
Q 003926 636 AENAEK-VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDP 714 (786)
Q Consensus 636 ~~~~~~-~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 714 (786)
...... .....++..|++||......++.++|||||||++|||++|++||...+........ .........
T Consensus 165 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~------~~~~~~~~~-- 236 (297)
T cd06656 165 ITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI------ATNGTPELQ-- 236 (297)
T ss_pred ccCCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeee------ccCCCCCCC--
Confidence 432221 12234566799999988888999999999999999999999998654321110000 000000000
Q ss_pred cccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 715 AVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 715 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.+......+.+++.+||+.+|++||++.||++|.|+..
T Consensus 237 -----~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~ 274 (297)
T cd06656 237 -----NPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKL 274 (297)
T ss_pred -----CccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhcc
Confidence 11122234667888999999999999999999998764
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=310.01 Aligned_cols=251 Identities=25% Similarity=0.375 Sum_probs=199.1
Q ss_pred hcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
.++|+..+.||+|+||.||+|..++++.||+|.+.... ...+.|.+|+.++++++|+||+++++++. .+..
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--------~~~~ 75 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVT--------QEPI 75 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEc--------cCCc
Confidence 45678889999999999999998889999999987544 34578999999999999999999998753 2357
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
++||||+++|+|.+++.... ...+++.++..++.|++.||+|||+. +++||||||+||+++.++.++++|||++..
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~ 151 (260)
T cd05067 76 YIITEYMENGSLVDFLKTPE-GIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARL 151 (260)
T ss_pred EEEEEcCCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceee
Confidence 99999999999999987533 34689999999999999999999987 999999999999999999999999999865
Q ss_pred cccccc--cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 636 AENAEK--VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 636 ~~~~~~--~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
...... .....++..|++||......++.++|||||||++|||++ |++||...........+.. . ..
T Consensus 152 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~----~---~~--- 221 (260)
T cd05067 152 IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLER----G---YR--- 221 (260)
T ss_pred cCCCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHc----C---CC---
Confidence 432111 112223456899999888889999999999999999999 9999976543332222110 0 00
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
..... .....+.+++.+||+.+|++||+++++...+.
T Consensus 222 -~~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 258 (260)
T cd05067 222 -MPRPD----NCPEELYELMRLCWKEKPEERPTFEYLRSVLE 258 (260)
T ss_pred -CCCCC----CCCHHHHHHHHHHccCChhhCCCHHHHHHHhh
Confidence 00111 11235778888999999999999999998774
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=318.58 Aligned_cols=257 Identities=20% Similarity=0.363 Sum_probs=198.9
Q ss_pred hcCCCccCccCCCCCceeEEEEec--------CCcEEEEEEecccCC-CChHHHHHHHHHHhcC-CCCCcceeeeeeeec
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK--------NGTFVAIRCLKMKKC-HSTRNFMHHIELISKL-RHRHLVSALGHCFEC 545 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~ 545 (786)
.++|...+.||+|+||.||+|+.. ++..||+|.++.... ....++.+|+++++++ +|+||++++++|..
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~- 95 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ- 95 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec-
Confidence 356788899999999999999742 235799999875432 2345788999999999 79999999998865
Q ss_pred cccCCCCceEEEEEecCCCCChhHHhhcCCC-------------CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCC
Q 003926 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGHA-------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNL 612 (786)
Q Consensus 546 ~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdl 612 (786)
.+..|+||||+++|+|.+++..... ...++|.+++.++.|++.||+|||+. +++||||
T Consensus 96 ------~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dl 166 (307)
T cd05098 96 ------DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDL 166 (307)
T ss_pred ------CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---Ccccccc
Confidence 3568999999999999999975321 13589999999999999999999987 9999999
Q ss_pred CCCceeecCCCcccccCCCccccccccccc---ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCc
Q 003926 613 KITDILLDQNLVAKISSYNLPLLAENAEKV---GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRK 688 (786)
Q Consensus 613 k~~NILld~~~~~kl~DfGl~~~~~~~~~~---~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~ 688 (786)
||+||+++.++.+||+|||++......... .....+..|+|||......++.++|||||||++|||++ |++|+...
T Consensus 167 kp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~ 246 (307)
T cd05098 167 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 246 (307)
T ss_pred cHHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcC
Confidence 999999999999999999998644321111 11112346899999888889999999999999999998 88888765
Q ss_pred hhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 689 EVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
....+...+.. . ... .. +......+.+++.+||+.+|++||+|.||++++....
T Consensus 247 ~~~~~~~~~~~----~--~~~-----~~----~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~ 300 (307)
T cd05098 247 PVEELFKLLKE----G--HRM-----DK----PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 300 (307)
T ss_pred CHHHHHHHHHc----C--CCC-----CC----CCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence 54433322211 0 000 01 1112245678889999999999999999999997543
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-36 Score=316.36 Aligned_cols=258 Identities=21% Similarity=0.373 Sum_probs=201.6
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
.++|+..+.||+|+||.||+|... ++..||+|.++.......+.|.+|++++++++|+||+++++++.. ...
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~~ 76 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFY-------ENK 76 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEec-------CCe
Confidence 456778889999999999999964 689999999876544445679999999999999999999998865 456
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++||||+++|+|.+++.+.. ..+++.....++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 77 ~~lv~e~~~~~~L~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~ 151 (280)
T cd06611 77 LWILIEFCDGGALDSIMLELE--RGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSA 151 (280)
T ss_pred EEEEeeccCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccch
Confidence 899999999999999987532 3589999999999999999999997 99999999999999999999999999975
Q ss_pred ccccc-cccccccccccccCccccc-----cCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccc
Q 003926 635 LAENA-EKVGHVIPYSGSIDPTNSA-----RGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESAR 708 (786)
Q Consensus 635 ~~~~~-~~~~~~~~~~~~~aPe~~~-----~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (786)
..... .......++..|++||... ...++.++|||||||++|||++|++|+...+.......+ ... ..
T Consensus 152 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~~---~~ 225 (280)
T cd06611 152 KNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKI---LKS---EP 225 (280)
T ss_pred hhcccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHH---hcC---CC
Confidence 43221 1222334567789999864 334778999999999999999999998765432211111 100 00
Q ss_pred cccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 709 RSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 709 ~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
+.+. .+......+.+++.+||+.+|++||++.+|++|.|+...
T Consensus 226 -----~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 268 (280)
T cd06611 226 -----PTLD--QPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ 268 (280)
T ss_pred -----CCcC--CcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence 0000 011122356678889999999999999999999997654
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-35 Score=313.95 Aligned_cols=261 Identities=20% Similarity=0.358 Sum_probs=197.1
Q ss_pred hcCCCccCccCCCCCceeEEEEecC-----------------CcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcce
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLKN-----------------GTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVS 537 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~~-----------------g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~ 537 (786)
..+|+..+.||+|+||.||+|+... +..||+|++..... ...++|.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 3567888999999999999998542 24689999875533 23567999999999999999999
Q ss_pred eeeeeeeccccCCCCceEEEEEecCCCCChhHHhhcCCC--------CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccc
Q 003926 538 ALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHA--------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFS 609 (786)
Q Consensus 538 l~g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~--------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivH 609 (786)
++++|.. .+..++||||+++|+|.+++.+... ...+++...+.++.|++.||+|||+. +++|
T Consensus 84 ~~~~~~~-------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H 153 (296)
T cd05051 84 LLGVCTV-------DPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVH 153 (296)
T ss_pred EEEEEec-------CCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccc
Confidence 9998864 3568999999999999999975321 12589999999999999999999987 9999
Q ss_pred cCCCCCceeecCCCcccccCCCcccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHh--CCCC
Q 003926 610 NNLKITDILLDQNLVAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV--GRPL 684 (786)
Q Consensus 610 rdlk~~NILld~~~~~kl~DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt--G~~p 684 (786)
|||||+||+++.++.+|++|||++........ .....++..|+|||....+.++.++|||||||++|||++ |..|
T Consensus 154 ~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p 233 (296)
T cd05051 154 RDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQP 233 (296)
T ss_pred cccchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCC
Confidence 99999999999999999999999864422211 112223457999999888889999999999999999998 6677
Q ss_pred CCCchhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 685 KSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
+................... ...... + .+.....++.+++.+||+.||++|||+.||++.|.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~--~~~~~~-~-----~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 234 YEHLTDQQVIENAGHFFRDD--GRQIYL-P-----RPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred CCCcChHHHHHHHHhccccc--cccccC-C-----CccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 76543332222211110000 000000 0 01112246788999999999999999999998774
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-36 Score=318.99 Aligned_cols=269 Identities=18% Similarity=0.305 Sum_probs=200.7
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
++|...+.||+|+||.||+|+.+ +++.||+|.++.... .....+.+|++++++++||||+++++++.. .+.
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~-------~~~ 78 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHT-------EKS 78 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEec-------CCe
Confidence 45778899999999999999865 688999999875433 234568899999999999999999998864 456
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++||||++ ++|.+++.... ..+++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 79 ~~lv~e~~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~ 152 (301)
T cd07873 79 LTLVFEYLD-KDLKQYLDDCG--NSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLAR 152 (301)
T ss_pred EEEEEeccc-cCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchh
Confidence 899999998 59999887532 3588999999999999999999997 99999999999999999999999999986
Q ss_pred cccccc-ccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHh-cccccccc
Q 003926 635 LAENAE-KVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTA-DESARRSM 711 (786)
Q Consensus 635 ~~~~~~-~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 711 (786)
...... ......++..|++||.... ..++.++|||||||++|||+||++||...........+...... ....+..+
T Consensus 153 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (301)
T cd07873 153 AKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGI 232 (301)
T ss_pred ccCCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhh
Confidence 443211 1122344667999998754 34788999999999999999999999765443222222211111 00011111
Q ss_pred cc---------ccccccCc----HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 712 VD---------PAVNKACL----DESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 712 ~d---------~~~~~~~~----~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
.+ +.....+. ......+.+++.+|++.||.+|||+.|+++|.||...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~ 292 (301)
T cd07873 233 LSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCL 292 (301)
T ss_pred hccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 00 11111111 1123356788899999999999999999999998543
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-36 Score=326.06 Aligned_cols=272 Identities=15% Similarity=0.263 Sum_probs=200.2
Q ss_pred HhcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
..+.|...+.||+|+||.||+|.. .++..||||++..... ...+.+.+|++++++++||||+++++++..... ...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~ 91 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATS-IEN 91 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccc-ccc
Confidence 456788899999999999999985 4688999999875432 234568899999999999999999988753211 111
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
....|+++||+ +++|.+++.. ..+++.....++.|+++||.|||+. +|+||||||+||+++.++.+||+|||
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg 163 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVKC----QKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFG 163 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCCc
Confidence 24579999998 6799988763 3589999999999999999999997 99999999999999999999999999
Q ss_pred cccccccccccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHH-HHHHHHHHHHhcccccc
Q 003926 632 LPLLAENAEKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL-LKNQLQAVVTADESARR 709 (786)
Q Consensus 632 l~~~~~~~~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~ 709 (786)
+++..... .....++..|+|||.+.. ..++.++|||||||++|||++|+.||...+... +................
T Consensus 164 ~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (343)
T cd07878 164 LARQADDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLK 241 (343)
T ss_pred cceecCCC--cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 98654332 223356778999998765 468999999999999999999999997644322 21111111000000000
Q ss_pred cc--------cc--cccccc----CcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 710 SM--------VD--PAVNKA----CLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 710 ~~--------~d--~~~~~~----~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.+ .. +..... ........+.+++.+|++.||++|||+.|++.|+||.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~ 303 (343)
T cd07878 242 KISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQ 303 (343)
T ss_pred hcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhc
Confidence 00 00 000000 00011224678889999999999999999999999876
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=311.13 Aligned_cols=239 Identities=21% Similarity=0.351 Sum_probs=184.6
Q ss_pred CccCCCCCceeEEEEecC-------------CcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccC
Q 003926 483 AFMGEGSQGQMYRGRLKN-------------GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDD 549 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~~-------------g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~ 549 (786)
+.||+|+||.||+|.+.+ ...||+|.+..........|.+|+.+++.++|||||+++|+|..
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~----- 75 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVR----- 75 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEec-----
Confidence 368999999999998532 23589998876554455689999999999999999999999865
Q ss_pred CCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCc-----
Q 003926 550 SSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV----- 624 (786)
Q Consensus 550 ~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~----- 624 (786)
....++||||+++|+|..++.... ..+++..++.++.|+++||+|||+. +|+||||||+|||++.++.
T Consensus 76 --~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~ 148 (262)
T cd05077 76 --DVENIMVEEFVEFGPLDLFMHRKS--DVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECG 148 (262)
T ss_pred --CCCCEEEEecccCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCC
Confidence 345799999999999999987532 3589999999999999999999997 9999999999999987664
Q ss_pred --ccccCCCcccccccccccccccccccccCccccc-cCCCCcccceeehhHHHHHHH-hCCCCCCCchhHHHHHHHHHH
Q 003926 625 --AKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSA-RGKLEEKIDIYDFGLILLEII-VGRPLKSRKEVDLLKNQLQAV 700 (786)
Q Consensus 625 --~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~-~~~~t~ksDVwSfGvvl~Ell-tG~~p~~~~~~~~~~~~~~~~ 700 (786)
+|++|||++...... ....++..|+|||.+. ...++.++|||||||++|||+ +|+.|+............
T Consensus 149 ~~~~l~d~g~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~--- 222 (262)
T cd05077 149 PFIKLSDPGIPITVLSR---QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERFY--- 222 (262)
T ss_pred ceeEeCCCCCCccccCc---ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHHH---
Confidence 799999997544221 1233556799999876 456899999999999999998 588887654332221110
Q ss_pred HHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 003926 701 VTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNL 753 (786)
Q Consensus 701 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l 753 (786)
.. ......+ ....+.+++.+||+.||.+||++.||++++
T Consensus 223 --~~---~~~~~~~---------~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 223 --EG---QCMLVTP---------SCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred --hc---CccCCCC---------ChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 00 0001111 123567888899999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=309.67 Aligned_cols=250 Identities=25% Similarity=0.425 Sum_probs=196.6
Q ss_pred cCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~ 556 (786)
++|...+.||+|+||.||+|..+.+..||+|.+.... ...+.|.+|++++++++|+|++++++++.. +..+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--------~~~~ 76 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVSE--------EPIY 76 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEcC--------CCcE
Confidence 3467778999999999999998777789999886543 345679999999999999999999987642 3478
Q ss_pred EEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccc
Q 003926 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636 (786)
Q Consensus 557 LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~ 636 (786)
+||||+++|+|.++++... ...++|..+..++.+++.||+|||+. +++||||||+||++++++.+||+|||++...
T Consensus 77 ~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~ 152 (260)
T cd05069 77 IVTEFMGKGSLLDFLKEGD-GKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLI 152 (260)
T ss_pred EEEEcCCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEc
Confidence 9999999999999997532 34589999999999999999999987 8999999999999999999999999998654
Q ss_pred cccccc--ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccccccccc
Q 003926 637 ENAEKV--GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMVD 713 (786)
Q Consensus 637 ~~~~~~--~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 713 (786)
...... ....++..|++||......++.++|||||||++|||+| |+.|+...........+.. . ..
T Consensus 153 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~---~----~~---- 221 (260)
T cd05069 153 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVER---G----YR---- 221 (260)
T ss_pred cCCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc---C----CC----
Confidence 322111 11223456899999888889999999999999999999 8999876443322222110 0 00
Q ss_pred ccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 714 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
+. .+......+.+++.+||++||++||++++|++.++
T Consensus 222 ~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 258 (260)
T cd05069 222 MP----CPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLE 258 (260)
T ss_pred CC----CCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHh
Confidence 00 11122345678888999999999999999998775
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-36 Score=315.03 Aligned_cols=253 Identities=22% Similarity=0.384 Sum_probs=195.5
Q ss_pred cCCCccCccCCCCCceeEEEEec------CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
.+|...++||+|+||.||++... ++..+|+|.+..........|.+|++++++++|+||+++++++..
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 78 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTE------ 78 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEec------
Confidence 35666789999999999999632 366899998876554455789999999999999999999998764
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCC------------CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCcee
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHA------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDIL 618 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NIL 618 (786)
.+..++||||+++|+|.+++..... ...+++.+++.++.|++.|++|||+. +++||||||+||+
T Consensus 79 -~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil 154 (280)
T cd05092 79 -GRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCL 154 (280)
T ss_pred -CCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEE
Confidence 3458999999999999999975321 13488999999999999999999987 9999999999999
Q ss_pred ecCCCcccccCCCccccccccccc---ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHH
Q 003926 619 LDQNLVAKISSYNLPLLAENAEKV---GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLK 694 (786)
Q Consensus 619 ld~~~~~kl~DfGl~~~~~~~~~~---~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~ 694 (786)
+++++.+||+|||++......... ....++..|+|||......++.++|||||||++|||++ |++||.........
T Consensus 155 ~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~ 234 (280)
T cd05092 155 VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAI 234 (280)
T ss_pred EcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHH
Confidence 999999999999998644221111 11122356899999888889999999999999999998 89998654332221
Q ss_pred HHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 695 NQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
.... . . .. +.....++ ..+.+++.+||+.||.+||++.||.+.+.
T Consensus 235 ~~~~---~-~----~~---~~~~~~~~----~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 235 ECIT---Q-G----RE---LERPRTCP----PEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred HHHH---c-C----cc---CCCCCCCC----HHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 1111 0 0 00 01111122 34668888999999999999999998774
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-36 Score=321.14 Aligned_cols=263 Identities=18% Similarity=0.275 Sum_probs=188.0
Q ss_pred cCccCCCCCceeEEEEec---CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEEE
Q 003926 482 SAFMGEGSQGQMYRGRLK---NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLI 558 (786)
Q Consensus 482 ~~~iG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV 558 (786)
.+.||+|+||+||+|+.+ +++.||+|.++... ....+.+|++++++++|||||++++++.. ......++|
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~-----~~~~~~~lv 78 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLS-----HADRKVWLL 78 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEec-----CCCcEEEEE
Confidence 468999999999999864 46789999986543 34567899999999999999999988753 123568999
Q ss_pred EecCCCCChhHHhhcCC------CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceee----cCCCccccc
Q 003926 559 FEYVPNGTLRSWISEGH------AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL----DQNLVAKIS 628 (786)
Q Consensus 559 ~Ey~~~GsL~~~l~~~~------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILl----d~~~~~kl~ 628 (786)
|||+++ +|.+++.... ....+++.....++.|++.||+|||+. +|+||||||+|||+ +.++.+||+
T Consensus 79 ~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~ 154 (317)
T cd07868 79 FDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIA 154 (317)
T ss_pred EeccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEe
Confidence 999974 8888875321 123588889999999999999999997 99999999999999 466789999
Q ss_pred CCCccccccccc----ccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchh----------HHH
Q 003926 629 SYNLPLLAENAE----KVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEV----------DLL 693 (786)
Q Consensus 629 DfGl~~~~~~~~----~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~----------~~~ 693 (786)
|||+++...... ......++..|+|||.+.. ..++.++||||+||++|||++|++||..... ..+
T Consensus 155 DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~ 234 (317)
T cd07868 155 DMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQL 234 (317)
T ss_pred ecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHH
Confidence 999986553221 1223456778999998866 4589999999999999999999999864221 111
Q ss_pred HHHHHHHHHhcccccc---ccc---------cccccccCc---------HHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 003926 694 KNQLQAVVTADESARR---SMV---------DPAVNKACL---------DESLKTMMEVCVRCLLKNPAERPSVEDVLWN 752 (786)
Q Consensus 694 ~~~~~~~~~~~~~~~~---~~~---------d~~~~~~~~---------~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 752 (786)
..............+. .+. .......+. ......+.+++.+|++.||++|||+.|+++|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~h 314 (317)
T cd07868 235 DRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 314 (317)
T ss_pred HHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 1111100000000000 000 000000000 0001246788999999999999999999998
Q ss_pred HHH
Q 003926 753 LQF 755 (786)
Q Consensus 753 l~~ 755 (786)
+||
T Consensus 315 p~f 317 (317)
T cd07868 315 PYF 317 (317)
T ss_pred CCC
Confidence 874
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-36 Score=316.46 Aligned_cols=266 Identities=21% Similarity=0.328 Sum_probs=196.7
Q ss_pred CCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
+|+..+.||+|+||.||+|+.+ +++.||||+++.... ...+.+.+|+.++++++||||+++++++.. .+.
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~~ 73 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQ-------ESR 73 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEee-------CCe
Confidence 4677889999999999999965 689999999875432 234678899999999999999999999865 456
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++||||++ |+|.+++........+++.....++.|+++||+|||+. +++||||||+||+++.++.+||+|||++.
T Consensus 74 ~~~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 149 (285)
T cd07861 74 LYLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLAR 149 (285)
T ss_pred EEEEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECccccee
Confidence 899999998 69999887544335689999999999999999999997 99999999999999999999999999985
Q ss_pred cccccc-ccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchh-HHHHHHHHHHHHhcccccc--
Q 003926 635 LAENAE-KVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVVTADESARR-- 709 (786)
Q Consensus 635 ~~~~~~-~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~-- 709 (786)
...... ......++..|+|||.... ..++.++|||||||++|||+||++|+..... +.............+..+.
T Consensus 150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (285)
T cd07861 150 AFGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGV 229 (285)
T ss_pred ecCCCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcc
Confidence 432211 1122234567999998754 3478999999999999999999999875432 2221111111000000000
Q ss_pred -----------ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 710 -----------SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 710 -----------~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
........ ........++.+++.+||+.||++|||+.||++|.||
T Consensus 230 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 230 TSLPDYKNTFPKWKKGSLR-SAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred hhhHHHHhhccccCcchhH-HhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 00000000 0001123456688899999999999999999988764
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-36 Score=317.48 Aligned_cols=269 Identities=18% Similarity=0.301 Sum_probs=205.9
Q ss_pred cCHHHHHHHhcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcC-CCCCcceeeeeeee
Q 003926 467 FSLEELEEATNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKL-RHRHLVSALGHCFE 544 (786)
Q Consensus 467 ~~~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~ 544 (786)
++.+++..++++|+..+.||+|+||.||+|.. .+++.+|+|++.... ....++.+|+.+++++ +||||+++++++..
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 45566677789999999999999999999996 468999999986532 2346688999999999 89999999999865
Q ss_pred ccccCCCCceEEEEEecCCCCChhHHhhcCC-CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC
Q 003926 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGH-AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL 623 (786)
Q Consensus 545 ~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~ 623 (786)
.. ....+..++||||+++|+|.++++... ....+++.....++.|++.||+|||+. +++||||||+||+++.++
T Consensus 91 ~~--~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~ 165 (291)
T cd06639 91 AD--KLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEG 165 (291)
T ss_pred cc--ccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCC
Confidence 21 112346899999999999999886421 234689999999999999999999987 999999999999999999
Q ss_pred cccccCCCccccccccc-ccccccccccccCccccccC-----CCCcccceeehhHHHHHHHhCCCCCCCchhH-HHHHH
Q 003926 624 VAKISSYNLPLLAENAE-KVGHVIPYSGSIDPTNSARG-----KLEEKIDIYDFGLILLEIIVGRPLKSRKEVD-LLKNQ 696 (786)
Q Consensus 624 ~~kl~DfGl~~~~~~~~-~~~~~~~~~~~~aPe~~~~~-----~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~-~~~~~ 696 (786)
.+||+|||++....... ......++..|++||.+... .++.++|||||||++|||++|++|+...... .+..+
T Consensus 166 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~ 245 (291)
T cd06639 166 GVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKI 245 (291)
T ss_pred CEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHH
Confidence 99999999986543221 11223456678999987543 3688999999999999999999998654321 11111
Q ss_pred HHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 697 LQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 697 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
.. .....+.++ .+....+.+++.+||+.+|++||++.|+++|+|+
T Consensus 246 ----~~---~~~~~~~~~-------~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~ 290 (291)
T cd06639 246 ----PR---NPPPTLLHP-------EKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFI 290 (291)
T ss_pred ----hc---CCCCCCCcc-------cccCHHHHHHHHHHhhcChhhCcCHHHHhcCccc
Confidence 00 001111111 1222357788999999999999999999999875
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-36 Score=315.71 Aligned_cols=251 Identities=17% Similarity=0.331 Sum_probs=195.1
Q ss_pred CCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 478 NFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
+|+..+.||+|+||.||+|+. .+++.||+|.+..... ...++|.+|++++++++||||+++++++.. .+..
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------~~~~ 74 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFV-------ENRI 74 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEE-------CCEE
Confidence 567788999999999999985 4789999999865432 234679999999999999999999999875 3568
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
++||||+++|+|..+. .+++.....++.|++.||+|||+. +|+|+||||+||+++.++.+||+|||++..
T Consensus 75 ~lv~e~~~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~ 144 (279)
T cd06619 75 SICTEFMDGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQ 144 (279)
T ss_pred EEEEecCCCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCccee
Confidence 9999999999997652 367888889999999999999997 999999999999999999999999999864
Q ss_pred cccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHH----HHHHHHHHHHhcccccccc
Q 003926 636 AENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL----LKNQLQAVVTADESARRSM 711 (786)
Q Consensus 636 ~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 711 (786)
..... .....++..|+|||......++.++||||||+++|||++|+.||....... ............
T Consensus 145 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~------- 216 (279)
T cd06619 145 LVNSI-AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED------- 216 (279)
T ss_pred ccccc-ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccC-------
Confidence 43221 123356678999999988889999999999999999999999986422110 001111110000
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.+.... ......+.+++.+||+.+|++||+++|++.|+|+..
T Consensus 217 -~~~~~~---~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~ 258 (279)
T cd06619 217 -PPVLPV---GQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQ 258 (279)
T ss_pred -CCCCCC---CcCCHHHHHHHHHHhhCChhhCCCHHHHhcCccccc
Confidence 011111 111235678888999999999999999999998764
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-36 Score=346.54 Aligned_cols=264 Identities=15% Similarity=0.250 Sum_probs=202.3
Q ss_pred HHhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 474 EATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 474 ~~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
...++|.+.+.||+|+||+||+|... ++..||+|.+...... ....|.+|+.++++++|||||++++++...
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de----- 84 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNK----- 84 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEec-----
Confidence 34568889999999999999999964 5789999998754322 346799999999999999999999987541
Q ss_pred CCceEEEEEecCCCCChhHHhhcCC-CCCCCCHHHHHHHHHHHHHHhhhhhcCCC----CCccccCCCCCceeecCC---
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGH-AHQSLTWTQRISAAIGVAKGIQFLHTGIV----PGVFSNNLKITDILLDQN--- 622 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~ia~~ia~gL~yLH~~~~----~~ivHrdlk~~NILld~~--- 622 (786)
.....||||||+++|+|.++|.... ....+++...+.|+.||+.||.|||+... .+||||||||+|||++.+
T Consensus 85 ~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~ 164 (1021)
T PTZ00266 85 ANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRH 164 (1021)
T ss_pred CCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccc
Confidence 2356899999999999999997531 22468999999999999999999998421 359999999999999643
Q ss_pred --------------CcccccCCCcccccccccccccccccccccCcccccc--CCCCcccceeehhHHHHHHHhCCCCCC
Q 003926 623 --------------LVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSAR--GKLEEKIDIYDFGLILLEIIVGRPLKS 686 (786)
Q Consensus 623 --------------~~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~--~~~t~ksDVwSfGvvl~ElltG~~p~~ 686 (786)
..+||+|||++.............++..|+|||.+.. ..++.++||||||||+|||+||+.||.
T Consensus 165 lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~ 244 (1021)
T PTZ00266 165 IGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFH 244 (1021)
T ss_pred cccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCC
Confidence 3489999999875543333334467889999998753 458999999999999999999999996
Q ss_pred Cchh-HHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 687 RKEV-DLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 687 ~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
.... ..+...+ ... +.+... .....+.+++..||+.+|.+||++.|++.+.++...
T Consensus 245 ~~~~~~qli~~l----k~~---------p~lpi~---~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i 301 (1021)
T PTZ00266 245 KANNFSQLISEL----KRG---------PDLPIK---GKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNV 301 (1021)
T ss_pred cCCcHHHHHHHH----hcC---------CCCCcC---CCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence 5432 1111111 100 011000 112356788889999999999999999999887654
|
|
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-36 Score=317.42 Aligned_cols=258 Identities=19% Similarity=0.338 Sum_probs=201.6
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
++|+..+.||+|+||+||+|... +|+.||+|++..... ...+.|.+|+++++.++||||+++++++.. .+.
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------~~~ 77 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLN-------ENN 77 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEec-------CCE
Confidence 45667789999999999999854 689999998865432 335679999999999999999999999875 357
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++||||+++|+|.+++.+. ..+++.....++.+++.||.|||+. .+++||||||+||++++++.++|+|||++.
T Consensus 78 ~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~d~gl~~ 152 (284)
T cd06620 78 ICMCMEFMDCGSLDRIYKKG---GPIPVEILGKIAVAVVEGLTYLYNV--HRIMHRDIKPSNILVNSRGQIKLCDFGVSG 152 (284)
T ss_pred EEEEEecCCCCCHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHh--cCeeccCCCHHHEEECCCCcEEEccCCccc
Confidence 89999999999999998753 3589999999999999999999963 279999999999999999999999999975
Q ss_pred ccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhH--------HHHHHHHHHHHhccc
Q 003926 635 LAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVD--------LLKNQLQAVVTADES 706 (786)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~--------~~~~~~~~~~~~~~~ 706 (786)
...... .....++..|++||.+..+.++.++|||||||++|||+||+.||...... .+...+.......
T Consensus 153 ~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 229 (284)
T cd06620 153 ELINSI-ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP-- 229 (284)
T ss_pred chhhhc-cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc--
Confidence 432211 12234667899999988888999999999999999999999998753321 1111111111110
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
.+.+. ..+....+.+++.+||+.||++|||+.||++++++.+.
T Consensus 230 ------~~~~~---~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~ 272 (284)
T cd06620 230 ------PPRLP---SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQA 272 (284)
T ss_pred ------CCCCC---chhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 01111 11133457788899999999999999999999987654
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-36 Score=329.68 Aligned_cols=255 Identities=16% Similarity=0.266 Sum_probs=196.5
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|+..+.||+|+||.||+|+.+ +++.||||+++... ......+.+|+.++.+++|+||+++++.+.. .
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~-------~ 73 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQD-------K 73 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEc-------C
Confidence 36888899999999999999865 68999999997532 2234568899999999999999999988764 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..|+||||+++|+|.+++.+. ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 74 ~~~~lv~E~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~ 147 (360)
T cd05627 74 RNLYLIMEFLPGGDMMTLLMKK---DTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGL 147 (360)
T ss_pred CEEEEEEeCCCCccHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccC
Confidence 5789999999999999999753 3588999999999999999999997 999999999999999999999999999
Q ss_pred cccccccc------------------------------------ccccccccccccCccccccCCCCcccceeehhHHHH
Q 003926 633 PLLAENAE------------------------------------KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILL 676 (786)
Q Consensus 633 ~~~~~~~~------------------------------------~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ 676 (786)
+....... ......++..|+|||.+....++.++|||||||++|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvily 227 (360)
T cd05627 148 CTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMY 227 (360)
T ss_pred CcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceee
Confidence 75332110 001235778899999998888999999999999999
Q ss_pred HHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCC---CHHHHHHHH
Q 003926 677 EIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERP---SVEDVLWNL 753 (786)
Q Consensus 677 ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP---t~~evl~~l 753 (786)
||+||++||...........+.. .. ....+.+.. . . ...+.+++.+++ .||.+|+ ++.|+++|+
T Consensus 228 el~tG~~Pf~~~~~~~~~~~i~~---~~---~~~~~p~~~--~-~---s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp 294 (360)
T cd05627 228 EMLIGYPPFCSETPQETYRKVMN---WK---ETLVFPPEV--P-I---SEKAKDLILRFC-TDSENRIGSNGVEEIKSHP 294 (360)
T ss_pred ecccCCCCCCCCCHHHHHHHHHc---CC---CceecCCCC--C-C---CHHHHHHHHHhc-cChhhcCCCCCHHHHhcCC
Confidence 99999999976554332221111 00 000011110 0 1 123445666655 4999998 489999999
Q ss_pred HHHH
Q 003926 754 QFAA 757 (786)
Q Consensus 754 ~~~~ 757 (786)
||..
T Consensus 295 ~f~~ 298 (360)
T cd05627 295 FFEG 298 (360)
T ss_pred CCCC
Confidence 9765
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=310.63 Aligned_cols=254 Identities=17% Similarity=0.289 Sum_probs=194.6
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC-----ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH-----STRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-----~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
.+|...+.||+|+||.||+|... ++..||+|++...... ..+.+.+|++++++++||||+++++++.. .
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~ 76 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRD-----R 76 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEc-----C
Confidence 36888899999999999999864 6899999998644321 23468899999999999999999997753 1
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
.....+++|||+++++|.+++... ..+++.....++.|++.||.|||+. +|+||||||+||+++.++.+||+||
T Consensus 77 ~~~~~~l~~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~df 150 (266)
T cd06651 77 AEKTLTIFMEYMPGGSVKDQLKAY---GALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDF 150 (266)
T ss_pred CCCEEEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccC
Confidence 235678999999999999999753 2488999999999999999999987 9999999999999999999999999
Q ss_pred Cccccccccc----ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccc
Q 003926 631 NLPLLAENAE----KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADES 706 (786)
Q Consensus 631 Gl~~~~~~~~----~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (786)
|++....... ......++..|+|||......++.++|||||||++|||++|++||........ +......
T Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~---~~~~~~~--- 224 (266)
T cd06651 151 GASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAA---IFKIATQ--- 224 (266)
T ss_pred CCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHH---HHHHhcC---
Confidence 9986442211 11123456779999999888899999999999999999999999875432111 1110000
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
...+.+.. .....+.+++ +||..+|++||+|+||++|++|.
T Consensus 225 ----~~~~~~~~----~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 225 ----PTNPQLPS----HISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred ----CCCCCCch----hcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 01122111 1112333444 68889999999999999998863
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=311.10 Aligned_cols=250 Identities=22% Similarity=0.405 Sum_probs=194.6
Q ss_pred CCCccCccCCCCCceeEEEEec-CC---cEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK-NG---TFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~-~g---~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
+|+..+.||+|+||.||+|+.+ ++ ..||||.++.... ...++|.+|+.++++++||||+++++++.. .
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~-------~ 77 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK-------S 77 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECC-------C
Confidence 4667899999999999999865 33 3699999875432 234679999999999999999999998754 3
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
...++||||+++|+|.+++.... ..+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+|++|||+
T Consensus 78 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~ 152 (269)
T cd05065 78 RPVMIITEFMENGALDSFLRQND--GQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGL 152 (269)
T ss_pred CceEEEEecCCCCcHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCcc
Confidence 56899999999999999997532 3589999999999999999999997 999999999999999999999999999
Q ss_pred cccccccccc---cccc---ccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcc
Q 003926 633 PLLAENAEKV---GHVI---PYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADE 705 (786)
Q Consensus 633 ~~~~~~~~~~---~~~~---~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 705 (786)
+......... .... .+..|++||......++.++|||||||++|||++ |+.||...........+. ...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~---~~~- 228 (269)
T cd05065 153 SRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIE---QDY- 228 (269)
T ss_pred ccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHH---cCC-
Confidence 8654322111 1111 1235899999988889999999999999999887 999987654433322221 100
Q ss_pred ccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 706 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
.......+ +..+.+++.+||+.+|++||++.+|+..+.
T Consensus 229 -------~~~~~~~~----~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 266 (269)
T cd05065 229 -------RLPPPMDC----PTALHQLMLDCWQKDRNARPKFGQIVSTLD 266 (269)
T ss_pred -------cCCCcccC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 00001112 234667888999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-36 Score=317.25 Aligned_cols=270 Identities=15% Similarity=0.265 Sum_probs=204.9
Q ss_pred cCHHHHHHHhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcC-CCCCcceeeeeeee
Q 003926 467 FSLEELEEATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKL-RHRHLVSALGHCFE 544 (786)
Q Consensus 467 ~~~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~ 544 (786)
+.++.+..++++|+..+.||+|+||.||+|... +++.+|+|+++... ....++.+|+.+++++ +||||+++++++..
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 445667778899999999999999999999864 68899999876432 2346788999999999 69999999998864
Q ss_pred ccccCCCCceEEEEEecCCCCChhHHhhcCC-CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC
Q 003926 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGH-AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL 623 (786)
Q Consensus 545 ~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~ 623 (786)
... ...+..++||||+++|+|.++++... ....+++.....++.|+++||.|||+. +|+||||||+||+++.++
T Consensus 87 ~~~--~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~ 161 (286)
T cd06638 87 KDV--KNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEG 161 (286)
T ss_pred ccc--CCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCC
Confidence 221 22456899999999999999886421 234688999999999999999999997 999999999999999999
Q ss_pred cccccCCCccccccccc-ccccccccccccCcccccc-----CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHH
Q 003926 624 VAKISSYNLPLLAENAE-KVGHVIPYSGSIDPTNSAR-----GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQL 697 (786)
Q Consensus 624 ~~kl~DfGl~~~~~~~~-~~~~~~~~~~~~aPe~~~~-----~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~ 697 (786)
.+|++|||++....... ......++..|+|||.+.. ..++.++|||||||++|||++|+.|+......... .
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~--~ 239 (286)
T cd06638 162 GVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRAL--F 239 (286)
T ss_pred CEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHH--h
Confidence 99999999986543221 1223346678999998642 44788999999999999999999998654321111 0
Q ss_pred HHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 698 QAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 698 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
. ..........++.. ....+.+++.+||+.||++|||+.||++|+|+
T Consensus 240 ~----~~~~~~~~~~~~~~-------~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 240 K----IPRNPPPTLHQPEL-------WSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred h----ccccCCCcccCCCC-------cCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 0 00000011111111 12346688889999999999999999998863
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-35 Score=313.21 Aligned_cols=260 Identities=19% Similarity=0.366 Sum_probs=194.7
Q ss_pred cCCCccCccCCCCCceeEEEEec-----------------CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCccee
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-----------------NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSA 538 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-----------------~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l 538 (786)
++|+..+.||+|+||.||++... ++..||+|.+..... ....+|.+|++++++++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 46788899999999999998532 245799999875432 234679999999999999999999
Q ss_pred eeeeeeccccCCCCceEEEEEecCCCCChhHHhhcCCC--------CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCcccc
Q 003926 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHA--------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSN 610 (786)
Q Consensus 539 ~g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~--------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHr 610 (786)
++++.. .+..++||||+++|+|.+++..... ...+++.+...++.|++.|++|||+. +++||
T Consensus 85 ~~~~~~-------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~ 154 (296)
T cd05095 85 LAVCIT-------SDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHR 154 (296)
T ss_pred EEEEec-------CCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---Ceecc
Confidence 998865 3458999999999999999975321 13478899999999999999999997 99999
Q ss_pred CCCCCceeecCCCcccccCCCcccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHh--CCCCC
Q 003926 611 NLKITDILLDQNLVAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV--GRPLK 685 (786)
Q Consensus 611 dlk~~NILld~~~~~kl~DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt--G~~p~ 685 (786)
||||+||+++.++.+|++|||+++....... ......+..|++||....+.++.++|||||||++|||++ |..|+
T Consensus 155 dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~ 234 (296)
T cd05095 155 DLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPY 234 (296)
T ss_pred cCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCc
Confidence 9999999999999999999999864422211 111222356899998878889999999999999999998 66777
Q ss_pred CCchhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 686 SRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
................... ......+. ...+ ...+.+++.+||+.||++||++.||++.|.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~----~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 235 SQLSDEQVIENTGEFFRDQ---GRQVYLPK-PALC----PDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred cccChHHHHHHHHHHHhhc---cccccCCC-CCCC----CHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 6543332222111111110 00001111 1112 245678899999999999999999998774
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=315.73 Aligned_cols=255 Identities=18% Similarity=0.311 Sum_probs=198.4
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
+.|+..+.||+|+||.||+|+.. ++..||+|.+........+.|.+|++++++++|+||+++++++.. ....
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~~~ 84 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYW-------DGKL 84 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEe-------CCeE
Confidence 45677889999999999999965 589999999876554456779999999999999999999998764 3568
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
++||||+++|+|..++.+.. ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++..
T Consensus 85 ~lv~e~~~~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~ 159 (292)
T cd06644 85 WIMIEFCPGGAVDAIMLELD--RGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAK 159 (292)
T ss_pred EEEEecCCCCcHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCcccee
Confidence 99999999999998876432 3589999999999999999999997 999999999999999999999999998754
Q ss_pred cccc-cccccccccccccCccccc-----cCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 636 AENA-EKVGHVIPYSGSIDPTNSA-----RGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 636 ~~~~-~~~~~~~~~~~~~aPe~~~-----~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
.... .......++..|++||.+. ...++.++|||||||++|||++|++|+........... .... ...
T Consensus 160 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~---~~~~---~~~ 233 (292)
T cd06644 160 NVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLK---IAKS---EPP 233 (292)
T ss_pred ccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHH---HhcC---CCc
Confidence 3221 1122334566799999874 34478899999999999999999999865433221111 1100 000
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
.... +......+.+++.+||+.+|++||++.||++|+++.
T Consensus 234 ~~~~-------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~ 273 (292)
T cd06644 234 TLSQ-------PSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVS 273 (292)
T ss_pred cCCC-------CcccCHHHHHHHHHHhcCCcccCcCHHHHhcCcccc
Confidence 1111 112223567888999999999999999999998865
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-36 Score=322.15 Aligned_cols=245 Identities=17% Similarity=0.286 Sum_probs=188.6
Q ss_pred CccCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHHHHH-HHhcCCCCCcceeeeeeeeccccCCCCceEEE
Q 003926 483 AFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIE-LISKLRHRHLVSALGHCFECYFDDSSVSRIFL 557 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~-~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~L 557 (786)
+.||+|+||+||+|+.. +++.||+|++..... .....+.+|.. +++.++||||+++++++.. .+..|+
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~-------~~~~~l 73 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT-------ADKLYF 73 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEc-------CCeEEE
Confidence 36899999999999965 678999999875431 22334555554 5688999999999988764 456899
Q ss_pred EEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccc
Q 003926 558 IFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637 (786)
Q Consensus 558 V~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~ 637 (786)
||||+++|+|.+++... ..+.......++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 74 v~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~ 147 (325)
T cd05602 74 VLDYINGGELFYHLQRE---RCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENI 147 (325)
T ss_pred EEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccc
Confidence 99999999999999753 3477778888999999999999997 99999999999999999999999999986432
Q ss_pred -cccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccc
Q 003926 638 -NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAV 716 (786)
Q Consensus 638 -~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 716 (786)
.........++..|+|||.+....++.++|||||||++|||++|++||...........+. ... ....+.
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~---~~~-----~~~~~~- 218 (325)
T cd05602 148 EHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL---NKP-----LQLKPN- 218 (325)
T ss_pred cCCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHH---hCC-----cCCCCC-
Confidence 2222234457788999999988889999999999999999999999997654433222211 110 001111
Q ss_pred cccCcHHHHHHHHHHHHHhccCCCCCCCCHH----HHHHHHHHH
Q 003926 717 NKACLDESLKTMMEVCVRCLLKNPAERPSVE----DVLWNLQFA 756 (786)
Q Consensus 717 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~----evl~~l~~~ 756 (786)
....+.+++.+|++.||.+||++. ++.+|+++.
T Consensus 219 -------~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~ 255 (325)
T cd05602 219 -------ITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFS 255 (325)
T ss_pred -------CCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccC
Confidence 123456788899999999999865 777777653
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=310.82 Aligned_cols=252 Identities=18% Similarity=0.343 Sum_probs=196.7
Q ss_pred CCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCC------ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCH------STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~------~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
+|...+.||+|+||.||+|...+|+.+|||.++..... ....+.+|++++++++|+||++++++|.+
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------- 73 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLD------- 73 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeec-------
Confidence 36678899999999999999888999999998754321 12458899999999999999999999875
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
.+..++||||+++|+|.+++.+. ..+++.....++.|++.||+|||+. +|+|+||||+||+++.++.+||+|||
T Consensus 74 ~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg 147 (265)
T cd06631 74 DNTISIFMEFVPGGSISSILNRF---GPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFG 147 (265)
T ss_pred CCeEEEEEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccch
Confidence 35689999999999999999753 3578999999999999999999987 89999999999999999999999999
Q ss_pred cccccccc-------cccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhc
Q 003926 632 LPLLAENA-------EKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704 (786)
Q Consensus 632 l~~~~~~~-------~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 704 (786)
++...... .......++..|++||......++.++|||||||++|||++|+.||...+..... ..... .
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~--~~~~~--~ 223 (265)
T cd06631 148 CARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAM--FYIGA--H 223 (265)
T ss_pred hhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHH--HHhhh--c
Confidence 98543211 1111234566799999998888999999999999999999999998654322111 11100 0
Q ss_pred cccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 705 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
. . ..+.+... ....+.+++.+||+.+|++||++.|++.|.|+
T Consensus 224 ~-~----~~~~~~~~----~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 224 R-G----LMPRLPDS----FSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred c-C----CCCCCCCC----CCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 0 0 01111111 22346678889999999999999999988763
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-35 Score=306.94 Aligned_cols=246 Identities=21% Similarity=0.360 Sum_probs=193.8
Q ss_pred CccCCCCCceeEEEEecC--C--cEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEE
Q 003926 483 AFMGEGSQGQMYRGRLKN--G--TFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFL 557 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~~--g--~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~L 557 (786)
+.||+|+||.||+|.+.+ + ..||||.+..... ...+.|.+|++++++++||||+++++++.. ...++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--------~~~~~ 72 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT--------HPLMM 72 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC--------CeEEE
Confidence 468999999999998643 3 3699999987665 456789999999999999999999998753 45799
Q ss_pred EEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccc
Q 003926 558 IFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637 (786)
Q Consensus 558 V~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~ 637 (786)
||||+++|+|.+++.+... ..++|.....++.|++.||+|||+. +++||||||+||+++.++.+||+|||++....
T Consensus 73 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~ 148 (257)
T cd05040 73 VTELAPLGSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALP 148 (257)
T ss_pred EEEecCCCcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEecccccccccc
Confidence 9999999999999976432 4689999999999999999999997 99999999999999999999999999986553
Q ss_pred ccccc----ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 638 NAEKV----GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 638 ~~~~~----~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
..... ....++..|++||......++.++|||||||++|||++ |+.|+...........+.. ... ...
T Consensus 149 ~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~---~~~----~~~ 221 (257)
T cd05040 149 QNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDK---EGE----RLE 221 (257)
T ss_pred ccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh---cCC----cCC
Confidence 32111 11233457899999888889999999999999999999 9999865443332222211 100 000
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
. +...+..+.+++.+||+.+|++||++.||++.+.
T Consensus 222 ~-------~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 222 R-------PEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred C-------CccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 0 1112345778889999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=309.58 Aligned_cols=246 Identities=20% Similarity=0.365 Sum_probs=187.5
Q ss_pred CccCCCCCceeEEEEec----CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEE
Q 003926 483 AFMGEGSQGQMYRGRLK----NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFL 557 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~L 557 (786)
+.||+|+||.||+|... ++..||+|++..... ...+.|.+|+.+++.++||||++++++|... .+..++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~------~~~~~l 74 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPS------EGSPLV 74 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecC------CCCcEE
Confidence 46899999999999853 245799998864322 2346789999999999999999999987531 234789
Q ss_pred EEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccc
Q 003926 558 IFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637 (786)
Q Consensus 558 V~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~ 637 (786)
||||+++|+|.+++.+.. ..+++...+.++.|+++|++|||+. +++||||||+||++++++.+||+|||+++...
T Consensus 75 v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~ 149 (262)
T cd05058 75 VLPYMKHGDLRNFIRSET--HNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIY 149 (262)
T ss_pred EEecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCcccccccc
Confidence 999999999999997532 3467888899999999999999997 99999999999999999999999999986442
Q ss_pred ccc-----ccccccccccccCccccccCCCCcccceeehhHHHHHHHhC-CCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 638 NAE-----KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVG-RPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 638 ~~~-----~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
... ......++..|+|||......++.++|||||||++|||++| .+|+...........+. . . .
T Consensus 150 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~---~-~----~-- 219 (262)
T cd05058 150 DKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLL---Q-G----R-- 219 (262)
T ss_pred CCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh---c-C----C--
Confidence 211 11122234568999998888899999999999999999995 66666543322221111 0 0 0
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
.+.....+ +..+.+++.+||+.+|++||++.||++++.
T Consensus 220 -~~~~~~~~----~~~~~~li~~cl~~~p~~Rp~~~~il~~l~ 257 (262)
T cd05058 220 -RLLQPEYC----PDPLYEVMLSCWHPKPEMRPTFSELVSRIE 257 (262)
T ss_pred -CCCCCCcC----CHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 00011111 235678889999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=314.00 Aligned_cols=254 Identities=22% Similarity=0.362 Sum_probs=196.5
Q ss_pred hcCCCccCccCCCCCceeEEEEec------CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeecccc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFD 548 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~ 548 (786)
.++|+..+.||+|+||.||+|..+ ++..||+|.+..... ...++|.+|++++++++||||++++++|..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~---- 79 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAV---- 79 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcC----
Confidence 467888999999999999999853 467899999875432 234679999999999999999999998864
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCC-------------------CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccc
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGH-------------------AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFS 609 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~-------------------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivH 609 (786)
.+..++||||+++|+|.+++.... ....+++.+++.++.|++.||+|||+. +++|
T Consensus 80 ---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H 153 (288)
T cd05050 80 ---GKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVH 153 (288)
T ss_pred ---CCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---Ceec
Confidence 345799999999999999997421 113478899999999999999999997 9999
Q ss_pred cCCCCCceeecCCCcccccCCCcccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCC
Q 003926 610 NNLKITDILLDQNLVAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLK 685 (786)
Q Consensus 610 rdlk~~NILld~~~~~kl~DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~ 685 (786)
|||||+||++++++.+||+|||++........ ......+..|+|||......++.++|||||||++|||++ |..|+
T Consensus 154 ~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~ 233 (288)
T cd05050 154 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPY 233 (288)
T ss_pred ccccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999854322111 111222346899999888889999999999999999998 88787
Q ss_pred CCchhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 686 SRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
...........+. .. .... ++......+.+++.+||+.+|++|||+.|+++.|+
T Consensus 234 ~~~~~~~~~~~~~----~~--~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 234 YGMAHEEVIYYVR----DG--NVLS---------CPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred CCCCHHHHHHHHh----cC--CCCC---------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 6543332221111 10 0000 11122345778999999999999999999998774
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-36 Score=316.96 Aligned_cols=250 Identities=17% Similarity=0.326 Sum_probs=196.5
Q ss_pred ccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEEEE
Q 003926 481 TSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIF 559 (786)
Q Consensus 481 ~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV~ 559 (786)
....||+|+||.||++... ++..||||.+........+.+.+|+.++++++|+||+++++.+.. .+..++||
T Consensus 26 ~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~-------~~~~~lv~ 98 (292)
T cd06658 26 SFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLV-------GDELWVVM 98 (292)
T ss_pred hhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheec-------CCeEEEEE
Confidence 3467999999999999854 688999999876544445678999999999999999999998764 45689999
Q ss_pred ecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccccc
Q 003926 560 EYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENA 639 (786)
Q Consensus 560 Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~ 639 (786)
||+++++|.+++.. ..+++.....++.|++.||+|||+. +|+||||||+||++++++.+||+|||++......
T Consensus 99 e~~~~~~L~~~~~~----~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~ 171 (292)
T cd06658 99 EFLEGGALTDIVTH----TRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKE 171 (292)
T ss_pred eCCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhcccc
Confidence 99999999999864 2488999999999999999999997 9999999999999999999999999998543221
Q ss_pred c-ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccccc
Q 003926 640 E-KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNK 718 (786)
Q Consensus 640 ~-~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 718 (786)
. ......++..|+|||......++.++|||||||++|||++|+.|+...........+.. . ..+....
T Consensus 172 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~---~--------~~~~~~~ 240 (292)
T cd06658 172 VPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRD---N--------LPPRVKD 240 (292)
T ss_pred cccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh---c--------CCCcccc
Confidence 1 11223456789999998888899999999999999999999999875443222111111 0 0111100
Q ss_pred cCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 719 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 719 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.......+.+++.+||..||++|||+.|++++.|+..
T Consensus 241 --~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~ 277 (292)
T cd06658 241 --SHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKL 277 (292)
T ss_pred --ccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhc
Confidence 0011224557778999999999999999999988764
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-35 Score=310.49 Aligned_cols=252 Identities=18% Similarity=0.328 Sum_probs=201.6
Q ss_pred CCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
.|+..+.||+|+||.||+|... ++..||||.++.... .....|.+|++++++++|+||+++++++.. ....
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~~~ 77 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK-------GTKL 77 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-------CCEE
Confidence 4566788999999999999965 588999999875432 234678999999999999999999998875 4568
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
++||||+++|+|.+++.. ..+++.+...++.|++.|++|||+. +++|+||+|+||+++.++.++++|||++..
T Consensus 78 ~lv~e~~~~~~L~~~i~~----~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~ 150 (277)
T cd06640 78 WIIMEYLGGGSALDLLRA----GPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQ 150 (277)
T ss_pred EEEEecCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEccccccee
Confidence 999999999999999874 2578889999999999999999997 999999999999999999999999999855
Q ss_pred ccccc-ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccc
Q 003926 636 AENAE-KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDP 714 (786)
Q Consensus 636 ~~~~~-~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 714 (786)
..... ......++..|++||......++.++|||||||++|||+||++|+...........+. .. . .+
T Consensus 151 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~----~~---~----~~ 219 (277)
T cd06640 151 LTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIP----KN---N----PP 219 (277)
T ss_pred ccCCccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhh----cC---C----CC
Confidence 43222 1122235567899999888889999999999999999999999987544322211110 00 0 01
Q ss_pred cccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 715 AVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 715 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
. ........+.+++.+||+.+|++||++.|+++|.++.+.
T Consensus 220 ~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 259 (277)
T cd06640 220 T----LTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKN 259 (277)
T ss_pred C----CchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhc
Confidence 1 122344567789999999999999999999999997764
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=317.83 Aligned_cols=256 Identities=20% Similarity=0.382 Sum_probs=197.9
Q ss_pred hcCCCccCccCCCCCceeEEEEec--------CCcEEEEEEecccCC-CChHHHHHHHHHHhcC-CCCCcceeeeeeeec
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK--------NGTFVAIRCLKMKKC-HSTRNFMHHIELISKL-RHRHLVSALGHCFEC 545 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~ 545 (786)
.++|...+.||+|+||.||+|+.. ++..||+|.++.... ...+.+.+|+.+++.+ +||||+++++++..
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~- 92 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ- 92 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEec-
Confidence 345677899999999999999741 345799999875432 3346799999999999 89999999998864
Q ss_pred cccCCCCceEEEEEecCCCCChhHHhhcCCC-------------CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCC
Q 003926 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGHA-------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNL 612 (786)
Q Consensus 546 ~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdl 612 (786)
....++||||+++|+|.+++..... ...++|.+++.++.|+++||+|||+. +++||||
T Consensus 93 ------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dl 163 (304)
T cd05101 93 ------DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDL 163 (304)
T ss_pred ------CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---Ceeeccc
Confidence 3568999999999999999975321 23578999999999999999999997 9999999
Q ss_pred CCCceeecCCCcccccCCCccccccccccc---ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCc
Q 003926 613 KITDILLDQNLVAKISSYNLPLLAENAEKV---GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRK 688 (786)
Q Consensus 613 k~~NILld~~~~~kl~DfGl~~~~~~~~~~---~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~ 688 (786)
||+||++++++.+||+|||+++........ ....++..|+|||......++.++||||||+++|||++ |..|+...
T Consensus 164 kp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~ 243 (304)
T cd05101 164 AARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 243 (304)
T ss_pred ccceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC
Confidence 999999999999999999998654322111 11223456899999888889999999999999999998 78888665
Q ss_pred hhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 689 EVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
....+...+.. . .. . .... .....+.+++.+||+.+|++||++.||++.|...
T Consensus 244 ~~~~~~~~~~~----~---~~-~---~~~~----~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~ 296 (304)
T cd05101 244 PVEELFKLLKE----G---HR-M---DKPA----NCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRI 296 (304)
T ss_pred CHHHHHHHHHc----C---Cc-C---CCCC----CCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHH
Confidence 44433322211 0 00 0 0011 1224567788899999999999999999998643
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=313.28 Aligned_cols=254 Identities=19% Similarity=0.338 Sum_probs=198.4
Q ss_pred hcCCCccCccCCCCCceeEEEEecC------CcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeecccc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLKN------GTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFD 548 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~~------g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~ 548 (786)
.++|...+.||+|+||.||+|..++ +..||+|.+..... .....|.+|+++++.++|+||++++|++..
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~---- 80 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVST---- 80 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcC----
Confidence 3467788999999999999998642 46899999865432 234578999999999999999999998764
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCCC-------CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGHA-------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ 621 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~~-------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~ 621 (786)
....++||||+++|+|.+++..... ...++|...+.++.|++.||.|||+. +++||||||+||+++.
T Consensus 81 ---~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~ 154 (277)
T cd05032 81 ---GQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAE 154 (277)
T ss_pred ---CCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcC
Confidence 3568999999999999999975321 23478999999999999999999987 9999999999999999
Q ss_pred CCcccccCCCccccccccc---ccccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHH
Q 003926 622 NLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQL 697 (786)
Q Consensus 622 ~~~~kl~DfGl~~~~~~~~---~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~ 697 (786)
++.+||+|||+++...... ......++..|+|||....+.++.++|||||||++||++| |++|+.........+.+
T Consensus 155 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~ 234 (277)
T cd05032 155 DLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFV 234 (277)
T ss_pred CCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHH
Confidence 9999999999986443221 1122234567999999888889999999999999999998 99998765444333222
Q ss_pred HHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 698 QAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 698 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
. .. .. +..+..+ ...+.+++.+||+.+|++|||+.|++..++
T Consensus 235 ~----~~--~~-----~~~~~~~----~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 235 I----DG--GH-----LDLPENC----PDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred h----cC--CC-----CCCCCCC----CHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 1 10 00 0111112 346778899999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=307.78 Aligned_cols=243 Identities=19% Similarity=0.323 Sum_probs=191.5
Q ss_pred CccCCCCCceeEEEEec-C---CcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEE
Q 003926 483 AFMGEGSQGQMYRGRLK-N---GTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFL 557 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~-~---g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~L 557 (786)
+.||+|+||.||+|... . +..||+|.+...... ..+++.+|+++++++.|+|||++++++.. +..++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--------~~~~~ 72 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKG--------EPLML 72 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC--------CceEE
Confidence 46999999999999753 2 368999998865442 35679999999999999999999998642 35799
Q ss_pred EEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccc
Q 003926 558 IFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637 (786)
Q Consensus 558 V~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~ 637 (786)
||||+++|+|.+++.... .+++..+..++.|++.||+|||.. +++||||||+||+++.++.+||+|||+++...
T Consensus 73 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~ 146 (257)
T cd05060 73 VMELAPLGPLLKYLKKRR---EIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALG 146 (257)
T ss_pred EEEeCCCCcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceee
Confidence 999999999999997632 689999999999999999999987 89999999999999999999999999986543
Q ss_pred cccccc----cccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 638 NAEKVG----HVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 638 ~~~~~~----~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
...... ...++..|++||......++.++|||||||++|||++ |++||...........+.. . ...
T Consensus 147 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~----~----~~~- 217 (257)
T cd05060 147 AGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLES----G----ERL- 217 (257)
T ss_pred cCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHc----C----CcC-
Confidence 222111 1112246899999888889999999999999999998 9999876544333222211 0 000
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
.. +......+.+++.+||..+|++||++.||++.+.
T Consensus 218 --~~----~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~ 253 (257)
T cd05060 218 --PR----PEECPQEIYSIMLSCWKYRPEDRPTFSELESTFR 253 (257)
T ss_pred --CC----CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 01 1112245678899999999999999999998885
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=315.46 Aligned_cols=255 Identities=16% Similarity=0.296 Sum_probs=195.6
Q ss_pred HhcCCCccCccCCCCCceeEEEEec------CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccc
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYF 547 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~ 547 (786)
..++|+..+.||+|+||.||+|..+ .+..||+|.++.... .....|.+|+.++++++||||+++++++..
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--- 80 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSK--- 80 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC---
Confidence 4567888999999999999999753 245899998865432 223568899999999999999999998764
Q ss_pred cCCCCceEEEEEecCCCCChhHHhhcCCC-------CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeec
Q 003926 548 DDSSVSRIFLIFEYVPNGTLRSWISEGHA-------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD 620 (786)
Q Consensus 548 ~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~-------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld 620 (786)
.+..++||||+++|+|.+++..... ....++.....++.|++.||.|||+. +|+||||||+||+++
T Consensus 81 ----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~ 153 (288)
T cd05061 81 ----GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVA 153 (288)
T ss_pred ----CCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEc
Confidence 3468999999999999999974211 23457788899999999999999987 999999999999999
Q ss_pred CCCcccccCCCcccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHH
Q 003926 621 QNLVAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQ 696 (786)
Q Consensus 621 ~~~~~kl~DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~ 696 (786)
+++.+|++|||+++....... .....++..|++||....+.++.++|||||||++|||++ |++|+...........
T Consensus 154 ~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~ 233 (288)
T cd05061 154 HDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF 233 (288)
T ss_pred CCCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 999999999999864422111 111123456899999888889999999999999999999 7888876544332221
Q ss_pred HHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 697 LQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 697 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
+ .... . +..... ....+.+++.+||+.||++|||+.|+++.+.
T Consensus 234 ~---~~~~---~-----~~~~~~----~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~ 276 (288)
T cd05061 234 V---MDGG---Y-----LDQPDN----CPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 276 (288)
T ss_pred H---HcCC---C-----CCCCCC----CCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 1 1100 0 001111 1245778888999999999999999998775
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-36 Score=322.19 Aligned_cols=258 Identities=14% Similarity=0.200 Sum_probs=196.3
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|...+.||+|+||.||+++.+ +++.||+|.+.... ......|.+|+.++..++|+||+++++++.. .
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~-------~ 73 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQD-------E 73 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc-------C
Confidence 46888899999999999999965 68899999987532 1223458889999999999999999988764 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..|+||||+++|+|.+++.... ..+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 74 ~~~~lv~Ey~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~ 148 (331)
T cd05624 74 NYLYLVMDYYVGGDLLTLLSKFE--DRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGS 148 (331)
T ss_pred CEEEEEEeCCCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccc
Confidence 67899999999999999997532 3588889999999999999999997 999999999999999999999999999
Q ss_pred ccccccccc--cccccccccccCcccccc-----CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcc
Q 003926 633 PLLAENAEK--VGHVIPYSGSIDPTNSAR-----GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADE 705 (786)
Q Consensus 633 ~~~~~~~~~--~~~~~~~~~~~aPe~~~~-----~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 705 (786)
+........ .....++..|+|||.+.. +.++.++|||||||++|||++|+.||...+.......+ .....
T Consensus 149 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i---~~~~~ 225 (331)
T cd05624 149 CLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI---MNHEE 225 (331)
T ss_pred eeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHH---HcCCC
Confidence 865432221 122457788999998764 46889999999999999999999999765433221111 11100
Q ss_pred ccccccccccccccCcHHHHHHHHHHHHHhccCCCCC--CCCHHHHHHHHHHHH
Q 003926 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAE--RPSVEDVLWNLQFAA 757 (786)
Q Consensus 706 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~--RPt~~evl~~l~~~~ 757 (786)
. .. +.+.. ......+.+++.+|+..++++ |++++++++|.||..
T Consensus 226 -~-~~-~p~~~-----~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~ 271 (331)
T cd05624 226 -R-FQ-FPSHI-----TDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEG 271 (331)
T ss_pred -c-cc-CCCcc-----ccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCC
Confidence 0 00 01111 112235567777888765544 579999999998753
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=321.26 Aligned_cols=258 Identities=15% Similarity=0.208 Sum_probs=194.6
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|+..+.||+|+||.||+++.+ +++.||+|++.... ......|.+|+.++..++|+||+++++++.. .
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-------~ 73 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQD-------E 73 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEec-------C
Confidence 46888899999999999999965 57899999986432 1223458899999999999999999988764 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..++||||+++|+|.+++.+.. ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 74 ~~~~lv~ey~~~g~L~~~l~~~~--~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~ 148 (332)
T cd05623 74 NNLYLVMDYYVGGDLLTLLSKFE--DRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGS 148 (332)
T ss_pred CEEEEEEeccCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecch
Confidence 57899999999999999997532 3588999999999999999999997 999999999999999999999999999
Q ss_pred cccccccc--ccccccccccccCccccc-----cCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcc
Q 003926 633 PLLAENAE--KVGHVIPYSGSIDPTNSA-----RGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADE 705 (786)
Q Consensus 633 ~~~~~~~~--~~~~~~~~~~~~aPe~~~-----~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 705 (786)
+....... ......++..|+|||.+. ...++.++|||||||++|||++|+.||...+.......+ .....
T Consensus 149 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i---~~~~~ 225 (332)
T cd05623 149 CLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI---MNHKE 225 (332)
T ss_pred heecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHH---hCCCc
Confidence 85432211 112345778899999875 346889999999999999999999999765433222111 11100
Q ss_pred ccccccccccccccCcHHHHHHHHHHHHHhccCCCC--CCCCHHHHHHHHHHHH
Q 003926 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA--ERPSVEDVLWNLQFAA 757 (786)
Q Consensus 706 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~--~RPt~~evl~~l~~~~ 757 (786)
...-|... ......+.+++.+|+..+++ .|+++.|+++|.||..
T Consensus 226 ----~~~~p~~~----~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~ 271 (332)
T cd05623 226 ----RFQFPAQV----TDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTG 271 (332)
T ss_pred ----cccCCCcc----ccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCC
Confidence 00001111 11223455666677755444 4789999999998753
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-36 Score=317.14 Aligned_cols=265 Identities=21% Similarity=0.342 Sum_probs=198.0
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
++|+..+.||+|+||.||+|..+ +++.||+|++...... ..+.+.+|++++++++||||+++++++.. .+
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~ 73 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRR-------KK 73 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhccc-------CC
Confidence 35778899999999999999975 5899999998754332 24578899999999999999999998754 45
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++||||+++++|.++.... ..++|.+...++.|+++||+|||+. +++|||++|+||++++++.+|++|||++
T Consensus 74 ~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~ 147 (286)
T cd07846 74 RLYLVFEFVDHTVLDDLEKYP---NGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFA 147 (286)
T ss_pred eEEEEEecCCccHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeee
Confidence 689999999999999887642 2489999999999999999999997 9999999999999999999999999998
Q ss_pred ccccccc-ccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhH-HHHHHHHHHHHhccccc--
Q 003926 634 LLAENAE-KVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVD-LLKNQLQAVVTADESAR-- 708 (786)
Q Consensus 634 ~~~~~~~-~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~-- 708 (786)
....... ......++..|++||.... ..++.++|||||||++|||++|++|+...... ....... .........
T Consensus 148 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 226 (286)
T cd07846 148 RTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIK-CLGNLIPRHQE 226 (286)
T ss_pred eeccCCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHH-HhCCCchhhHH
Confidence 6543222 1222345667899998754 45788999999999999999999998654321 1111111 100000000
Q ss_pred --------cccccccccc-----cCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 709 --------RSMVDPAVNK-----ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 709 --------~~~~d~~~~~-----~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
..+..+.... .........+.+++.+||+.+|++||++.|+++|.||
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 227 IFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred HhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 0000111100 0011223567789999999999999999999988764
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=311.48 Aligned_cols=254 Identities=19% Similarity=0.323 Sum_probs=195.0
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
++|...+.||+|+||.||+|+. .+++.||+|.++.........+.+|+.+++.++||||+++++++.. .+..
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~-------~~~~ 81 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLR-------RDKL 81 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEe-------CCEE
Confidence 3566678899999999999985 4689999999876544445668899999999999999999998765 4568
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
++||||+++|+|.+++... ..+++.+...++.|++.|+.|||+. +++||||||+||+++.++.+||+|||++..
T Consensus 82 ~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~ 155 (267)
T cd06645 82 WICMEFCGGGSLQDIYHVT---GPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQ 155 (267)
T ss_pred EEEEeccCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeE
Confidence 9999999999999998753 3589999999999999999999997 999999999999999999999999999854
Q ss_pred cccc-cccccccccccccCccccc---cCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 636 AENA-EKVGHVIPYSGSIDPTNSA---RGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 636 ~~~~-~~~~~~~~~~~~~aPe~~~---~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
.... .......++..|+|||.+. ...++.++|||||||++|||++|++|+............ ... ..
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~----~~~-----~~ 226 (267)
T cd06645 156 ITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLM----TKS-----NF 226 (267)
T ss_pred ccCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhh----hcc-----CC
Confidence 3221 1122335667899999864 445889999999999999999999997543321111100 000 00
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
..+..... ......+.+++.+||+.+|++||++++|+.|+|
T Consensus 227 ~~~~~~~~--~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 227 QPPKLKDK--MKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred CCCccccc--CCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 00110000 011234667888999999999999999998754
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-35 Score=306.24 Aligned_cols=251 Identities=20% Similarity=0.328 Sum_probs=185.3
Q ss_pred CccCCCCCceeEEEEecC---CcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEEE
Q 003926 483 AFMGEGSQGQMYRGRLKN---GTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLI 558 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~~---g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV 558 (786)
+.||+|+||.||+|...+ +..+|+|.++..... ....|.+|+.++++++||||++++|++.+ ....++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------~~~~~lv 73 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTE-------VTPYLLV 73 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC-------CCCcEEE
Confidence 368999999999998643 467999988765432 23578999999999999999999998864 3457999
Q ss_pred EecCCCCChhHHhhcCCC--CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccc
Q 003926 559 FEYVPNGTLRSWISEGHA--HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636 (786)
Q Consensus 559 ~Ey~~~GsL~~~l~~~~~--~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~ 636 (786)
|||+++|+|.+++..... ....++.....++.|+++|++|||+. +++||||||+||+++.++.+|++|||+++..
T Consensus 74 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~ 150 (269)
T cd05087 74 MEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNK 150 (269)
T ss_pred EECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccc
Confidence 999999999999975322 23467788889999999999999997 9999999999999999999999999998644
Q ss_pred ccccc---cccccccccccCccccccC-------CCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcc
Q 003926 637 ENAEK---VGHVIPYSGSIDPTNSARG-------KLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADE 705 (786)
Q Consensus 637 ~~~~~---~~~~~~~~~~~aPe~~~~~-------~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 705 (786)
..... .....++..|+|||..... .++.++|||||||++|||++ |+.||............ ...
T Consensus 151 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~---~~~-- 225 (269)
T cd05087 151 YKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYT---VRE-- 225 (269)
T ss_pred cCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHH---hhc--
Confidence 32211 1122344568999987532 35789999999999999996 99998654332221111 000
Q ss_pred ccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 706 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
......++....... ..+.+++.+|| .+|++|||++||++.|.
T Consensus 226 -~~~~~~~~~~~~~~~----~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 226 -QQLKLPKPRLKLPLS----DRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred -ccCCCCCCccCCCCC----hHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 111222222221111 23456777898 58999999999998763
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-35 Score=306.08 Aligned_cols=251 Identities=16% Similarity=0.290 Sum_probs=199.7
Q ss_pred CCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 478 NFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
+|+..+.||+|+||.||.++. ++++.|++|.+..... ...++|.+|++++++++|+||+++++++.+ .+.
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-------~~~ 73 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMD-------DNT 73 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEec-------CCe
Confidence 367789999999999999984 5689999999875532 335678999999999999999999999875 456
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++||||+++|+|.+++.... ...+++.++..++.|+++|++|||+. +++||||||+||++++++.+||+|||++.
T Consensus 74 ~~~~~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~ 149 (256)
T cd08221 74 LLIEMEYANGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISK 149 (256)
T ss_pred EEEEEEecCCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceE
Confidence 899999999999999997542 34689999999999999999999987 99999999999999999999999999986
Q ss_pred cccccc-ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccccc
Q 003926 635 LAENAE-KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVD 713 (786)
Q Consensus 635 ~~~~~~-~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 713 (786)
...... ......++..|.+||...+..++.++||||||+++|||++|+.|+...........+ ... .....
T Consensus 150 ~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~---~~~---~~~~~-- 221 (256)
T cd08221 150 ILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKI---VQG---NYTPV-- 221 (256)
T ss_pred EcccccccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHH---HcC---CCCCC--
Confidence 543322 122334567899999988778899999999999999999999998764433222111 110 01100
Q ss_pred ccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 714 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
.......+.+++.+||+.+|++||++.|++++++
T Consensus 222 -------~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~ 255 (256)
T cd08221 222 -------VSVYSSELISLVHSLLQQDPEKRPTADEVLDQPL 255 (256)
T ss_pred -------ccccCHHHHHHHHHHcccCcccCCCHHHHhhCcC
Confidence 0122235667888999999999999999998875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-35 Score=308.98 Aligned_cols=256 Identities=15% Similarity=0.271 Sum_probs=198.5
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|+..+.||+|+||.||+|+. .++..||||.+..... ....+|.+|+++++.++|+||+++++++.+ .
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-------~ 74 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE-------D 74 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEe-------C
Confidence 4577789999999999999995 5789999998865432 223578999999999999999999998875 3
Q ss_pred ceEEEEEecCCCCChhHHhhcC-CCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 553 SRIFLIFEYVPNGTLRSWISEG-HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
+..++||||+++|+|.+++... .....+++.+...++.++++||+|||+. +++|+||||+||+++.++.++++|||
T Consensus 75 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg 151 (267)
T cd08229 75 NELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred CeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcch
Confidence 5689999999999999998642 1234689999999999999999999997 99999999999999999999999999
Q ss_pred cccccccccc-cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 632 LPLLAENAEK-VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 632 l~~~~~~~~~-~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
++........ .....+...|+|||......++.++||||||+++|||++|..|+....... ........ .
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~--------~ 222 (267)
T cd08229 152 LGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL-YSLCKKIE--------Q 222 (267)
T ss_pred hhhccccCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchH-HHHhhhhh--------c
Confidence 9865432221 122345667999999888889999999999999999999999986433211 11111110 0
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
...+.... ......+.+++.+||+.||++||||.+|++.+.
T Consensus 223 ~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~ 263 (267)
T cd08229 223 CDYPPLPS---DHYSEELRQLVNMCINPDPEKRPDITYVYDVAK 263 (267)
T ss_pred CCCCCCCc---ccccHHHHHHHHHhcCCCcccCCCHHHHHHHHh
Confidence 01111111 122345667888999999999999999988764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=307.94 Aligned_cols=253 Identities=18% Similarity=0.302 Sum_probs=199.0
Q ss_pred CCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
+|+..+.||+|+||.||++..+ +++.||+|++..... ...+.+.+|++++++++|+|++++++.+.. ....
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------~~~~ 74 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEG------EDGL 74 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecC------CCCE
Confidence 4777899999999999999854 578999999875432 234578999999999999999999886542 1245
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++||||+++|+|.+++.... ...+++.+...++.+++.|++|||+. +++||||||+||+++.++.++|+|||++.
T Consensus 75 ~~lv~e~~~~~~l~~~l~~~~-~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~ 150 (257)
T cd08223 75 LYIVMGFCEGGDLYHKLKEQK-GKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIAR 150 (257)
T ss_pred EEEEecccCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceE
Confidence 799999999999999997532 24589999999999999999999997 99999999999999999999999999986
Q ss_pred cccccc-ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccccc
Q 003926 635 LAENAE-KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVD 713 (786)
Q Consensus 635 ~~~~~~-~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 713 (786)
...... ......++..|+|||......++.++||||||+++|||++|+.|+...+....... .... ..
T Consensus 151 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~---~~~~---~~----- 219 (257)
T cd08223 151 VLENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYR---IIEG---KL----- 219 (257)
T ss_pred EecccCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHH---HHhc---CC-----
Confidence 553221 12233456779999999888899999999999999999999999875543222111 1110 00
Q ss_pred ccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 714 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
+.. +......+.+++.+||+.+|++||++.|+++|+|+
T Consensus 220 ~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 220 PPM----PKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred CCC----ccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 011 11223457788999999999999999999988763
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=314.10 Aligned_cols=255 Identities=19% Similarity=0.333 Sum_probs=193.4
Q ss_pred CCCccCccCCCCCceeEEEEe-----cCCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 478 NFDTSAFMGEGSQGQMYRGRL-----KNGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~-----~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
.|...+.||+|+||.||++.. .++..||+|.++.... ...+.|.+|++++++++||||+++.+++... .
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~ 79 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTED-----G 79 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecC-----C
Confidence 356778999999999999974 2578999999875432 2346799999999999999999999988641 1
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
....++||||+++|+|.+++.+.. ..++|..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||
T Consensus 80 ~~~~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg 154 (284)
T cd05079 80 GNGIKLIMEFLPSGSLKEYLPRNK--NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFG 154 (284)
T ss_pred CCceEEEEEccCCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCc
Confidence 345799999999999999996532 3589999999999999999999997 99999999999999999999999999
Q ss_pred cccccccccc----cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhH------------HHHH
Q 003926 632 LPLLAENAEK----VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVD------------LLKN 695 (786)
Q Consensus 632 l~~~~~~~~~----~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~------------~~~~ 695 (786)
++........ .....++..|+|||......++.++|||||||++|||+|++.|....... ....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd05079 155 LTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTR 234 (284)
T ss_pred cccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHH
Confidence 9865432211 11223445689999988888999999999999999999987654221000 0000
Q ss_pred HHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 696 QLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 696 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
.+.. .... .. ... +......+.+++.+||+.+|++||++.|+++++.
T Consensus 235 ~~~~-~~~~--~~-----~~~----~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 281 (284)
T cd05079 235 LVRV-LEEG--KR-----LPR----PPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFE 281 (284)
T ss_pred HHHH-HHcC--cc-----CCC----CCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHH
Confidence 0000 0000 00 000 1112346778999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=307.82 Aligned_cols=252 Identities=16% Similarity=0.279 Sum_probs=199.3
Q ss_pred CCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 478 NFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
+|+..+.||+|+||.||+++. .+|+.||+|++..... ...+++.+|++++++++||||+++++++.. .+.
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------~~~ 73 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEE-------NGN 73 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecC-------CCe
Confidence 367789999999999999985 4689999999875432 234679999999999999999999998754 457
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++||||+++|+|.+++.... ...+++.+.+.++.|++.|++|||+. +++|+||+|+||+++.++.++++|||++.
T Consensus 74 ~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~ 149 (256)
T cd08218 74 LYIVMDYCEGGDLYKKINAQR-GVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIAR 149 (256)
T ss_pred EEEEEecCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeecccee
Confidence 899999999999999987532 23578999999999999999999997 99999999999999999999999999986
Q ss_pred ccccccc-cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccccc
Q 003926 635 LAENAEK-VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVD 713 (786)
Q Consensus 635 ~~~~~~~-~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 713 (786)
....... .....++..|++||......++.++|||||||++|||++|+.|+...+....... ..... .
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~---~~~~~---~----- 218 (256)
T cd08218 150 VLNSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLK---IIRGS---Y----- 218 (256)
T ss_pred ecCcchhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHH---HhcCC---C-----
Confidence 5433221 1223456679999998888899999999999999999999999875543322111 11110 0
Q ss_pred ccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 714 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
+.. +......+.+++.+||+.+|++||+|.||++|.|+
T Consensus 219 ~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 219 PPV----SSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred CCC----cccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 011 11223456788889999999999999999998763
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-35 Score=314.60 Aligned_cols=253 Identities=22% Similarity=0.345 Sum_probs=196.4
Q ss_pred hcCCCccCccCCCCCceeEEEEec------CCcEEEEEEecccCC-CChHHHHHHHHHHhcC-CCCCcceeeeeeeeccc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKC-HSTRNFMHHIELISKL-RHRHLVSALGHCFECYF 547 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~ 547 (786)
.++|...+.||+|+||.||+|... ++..||||+++.... ...+.|.+|+++++++ +|+||++++++|..
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~--- 110 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTI--- 110 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEec---
Confidence 356888899999999999999741 356899999875532 2245799999999999 79999999998864
Q ss_pred cCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccc
Q 003926 548 DDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKI 627 (786)
Q Consensus 548 ~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl 627 (786)
.+..++||||+++|+|.++++... ...+++.+...++.+++.||+|||+. +|+|+||||+||+++.+..+|+
T Consensus 111 ----~~~~~lv~e~~~~~~L~~~i~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l 182 (302)
T cd05055 111 ----GGPILVITEYCCYGDLLNFLRRKR-ESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKI 182 (302)
T ss_pred ----CCceEEEEEcCCCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEE
Confidence 345899999999999999997532 23489999999999999999999997 9999999999999999999999
Q ss_pred cCCCcccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHH-HHHHHHHHHH
Q 003926 628 SSYNLPLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDL-LKNQLQAVVT 702 (786)
Q Consensus 628 ~DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~-~~~~~~~~~~ 702 (786)
+|||+++....... .....++..|+|||......++.++|||||||++|||++ |++|+....... ..... .
T Consensus 183 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~----~ 258 (302)
T cd05055 183 CDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLI----K 258 (302)
T ss_pred CCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHH----H
Confidence 99999864432211 111223456899999888889999999999999999998 999986544321 11111 1
Q ss_pred hccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 703 ADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 703 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
.. .. +... ......+.+++.+||..+|++|||+.||++.+.
T Consensus 259 ~~---~~----~~~~----~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~ 299 (302)
T cd05055 259 EG---YR----MAQP----EHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIG 299 (302)
T ss_pred cC---Cc----CCCC----CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 00 00 0000 111235778889999999999999999998885
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-35 Score=306.47 Aligned_cols=255 Identities=19% Similarity=0.331 Sum_probs=200.8
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
.++|+..+.||+|+||.||+|... ++..+|+|.+........+.+.+|++++++++||||++++|++.. ...
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-------~~~ 74 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLR-------RDK 74 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEe-------CCE
Confidence 356888899999999999999864 578999999986655566789999999999999999999998764 456
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.+++|||+++++|.+++.... ..++..+...++.|++.||+|||+. +++|+||||+||+++.++.+||+|||++.
T Consensus 75 ~~l~~e~~~~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~ 149 (262)
T cd06613 75 LWIVMEYCGGGSLQDIYQVTR--GPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSA 149 (262)
T ss_pred EEEEEeCCCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccch
Confidence 899999999999999987532 3588999999999999999999997 99999999999999999999999999986
Q ss_pred cccccc-ccccccccccccCccccccC---CCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 635 LAENAE-KVGHVIPYSGSIDPTNSARG---KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 635 ~~~~~~-~~~~~~~~~~~~aPe~~~~~---~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
...... ......++..|++||..... .++.++|||||||++|||+||++|+............. . . .
T Consensus 150 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~---~-~-----~ 220 (262)
T cd06613 150 QLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLIS---K-S-----N 220 (262)
T ss_pred hhhhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---h-c-----c
Confidence 543221 22233456679999998766 78999999999999999999999987543222111110 0 0 0
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNL 753 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l 753 (786)
...+.. .........+.+++.+||..+|.+|||+.||+.|.
T Consensus 221 ~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~ 261 (262)
T cd06613 221 FPPPKL--KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHP 261 (262)
T ss_pred CCCccc--cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCC
Confidence 000000 01122334677889999999999999999999764
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-35 Score=306.49 Aligned_cols=256 Identities=16% Similarity=0.302 Sum_probs=199.6
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|+..+.||+|+||.||+|... +|+.||+|.++.... ...+.+.+|++++++++|+||+++++++.. .
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~-------~ 74 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIE-------N 74 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeec-------C
Confidence 57888899999999999999966 799999998874322 235679999999999999999999998865 3
Q ss_pred ceEEEEEecCCCCChhHHhhcC-CCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 553 SRIFLIFEYVPNGTLRSWISEG-HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
+..++||||+++|+|.+++... .....+++.++..++.++++||+|||+. +++||||||+||+++.++.++++|||
T Consensus 75 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~ 151 (267)
T cd08224 75 NELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred CeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccc
Confidence 5689999999999999998642 2234589999999999999999999997 99999999999999999999999999
Q ss_pred ccccccccc-ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 632 LPLLAENAE-KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 632 l~~~~~~~~-~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
++....... ......++..|.|||......++.++|||||||++|||++|+.|+....... ......... ...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~---~~~-- 225 (267)
T cd08224 152 LGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL-YSLCKKIEK---CDY-- 225 (267)
T ss_pred eeeeccCCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccH-HHHHhhhhc---CCC--
Confidence 986443221 1122345567899999888889999999999999999999999986443211 111111000 000
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
+.... ......+.+++.+||..+|++||++.+|++.+.
T Consensus 226 ---~~~~~---~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~ 263 (267)
T cd08224 226 ---PPLPA---DHYSEELRDLVSRCINPDPEKRPDISYVLQVAK 263 (267)
T ss_pred ---CCCCh---hhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHH
Confidence 11111 122335678888999999999999999998886
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=321.99 Aligned_cols=245 Identities=15% Similarity=0.210 Sum_probs=189.3
Q ss_pred cCCCCCceeEEEEec-CCcEEEEEEecccCCC---ChHHHHHHHHHHhcC---CCCCcceeeeeeeeccccCCCCceEEE
Q 003926 485 MGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH---STRNFMHHIELISKL---RHRHLVSALGHCFECYFDDSSVSRIFL 557 (786)
Q Consensus 485 iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~---~~~~f~~E~~~l~~l---~H~NIv~l~g~~~~~~~~~~~~~~~~L 557 (786)
||+|+||+||+|+.+ +|+.||||++...... ....+..|..++.+. +||||+++++++.. .+..|+
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~-------~~~~~l 73 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQT-------DSDLYL 73 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEec-------CCeEEE
Confidence 799999999999865 6899999998654321 233456677777765 69999999987764 456899
Q ss_pred EEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccc
Q 003926 558 IFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637 (786)
Q Consensus 558 V~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~ 637 (786)
||||+++|+|.+++... ..+++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||++....
T Consensus 74 v~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~ 147 (330)
T cd05586 74 VTDYMSGGELFWHLQKE---GRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANL 147 (330)
T ss_pred EEcCCCCChHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCC
Confidence 99999999999998753 3588999999999999999999997 99999999999999999999999999986432
Q ss_pred c-ccccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccccccc
Q 003926 638 N-AEKVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPA 715 (786)
Q Consensus 638 ~-~~~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 715 (786)
. ........++..|+|||.+... .++.++|||||||++|||+||+.||...........+. ... ..
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~----~~~--------~~ 215 (330)
T cd05586 148 TDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIA----FGK--------VR 215 (330)
T ss_pred CCCCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHH----cCC--------CC
Confidence 2 2222334577889999987654 48999999999999999999999997655433322111 000 00
Q ss_pred ccccCcHHHHHHHHHHHHHhccCCCCCCC----CHHHHHHHHHHHH
Q 003926 716 VNKACLDESLKTMMEVCVRCLLKNPAERP----SVEDVLWNLQFAA 757 (786)
Q Consensus 716 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP----t~~evl~~l~~~~ 757 (786)
+.... ....+.+++.+||+.||++|| ++.|+++|+|+..
T Consensus 216 ~~~~~---~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~ 258 (330)
T cd05586 216 FPKNV---LSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFAD 258 (330)
T ss_pred CCCcc---CCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccC
Confidence 11111 122455788899999999998 7899999999764
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-35 Score=318.08 Aligned_cols=258 Identities=15% Similarity=0.217 Sum_probs=193.7
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|+..+.||+|+||+||+++.. +++.||||++.... ....+.|.+|+.++..++|+||+++++++.. .
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-------~ 73 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQD-------E 73 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEec-------C
Confidence 46888999999999999999965 68999999987532 1234568899999999999999999988764 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..|+||||+++|+|.+++.+. ...+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 74 ~~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~ 148 (331)
T cd05597 74 NNLYLVMDYYVGGDLLTLLSKF--EDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGS 148 (331)
T ss_pred CeEEEEEecCCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCc
Confidence 5789999999999999999753 23588889999999999999999997 999999999999999999999999999
Q ss_pred ccccccccc--cccccccccccCcccccc-----CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcc
Q 003926 633 PLLAENAEK--VGHVIPYSGSIDPTNSAR-----GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADE 705 (786)
Q Consensus 633 ~~~~~~~~~--~~~~~~~~~~~aPe~~~~-----~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 705 (786)
+........ .....++..|+|||.+.. +.++.++|||||||++|||++|+.||...........+ .....
T Consensus 149 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i---~~~~~ 225 (331)
T cd05597 149 CLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI---MNHKE 225 (331)
T ss_pred eeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHH---HcCCC
Confidence 854432221 122357788999998752 45788999999999999999999999765432221111 11100
Q ss_pred ccccccccccccccCcHHHHHHHHHHHHHhcc--CCCCCCCCHHHHHHHHHHHH
Q 003926 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLL--KNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 706 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~--~dP~~RPt~~evl~~l~~~~ 757 (786)
... +.+. .... ...+.+++.+|+. .++..||++.++++|+|+..
T Consensus 226 --~~~-~~~~-~~~~----~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~ 271 (331)
T cd05597 226 --HFQ-FPPD-VTDV----SEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEG 271 (331)
T ss_pred --ccc-CCCc-cCCC----CHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCC
Confidence 000 0111 0111 2234455556554 44445899999999999753
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-35 Score=312.53 Aligned_cols=253 Identities=21% Similarity=0.378 Sum_probs=195.8
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCc----EEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGT----FVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~----~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
++|+..+.||+|+||.||+|... +|. .||+|.+...... ...+|.+|+.++++++||||++++|+|..
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~------ 80 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLS------ 80 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcC------
Confidence 45677889999999999999853 454 5789988754332 23478999999999999999999998864
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
...++++||+++|+|.+++... ...+++...+.++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 81 --~~~~~v~e~~~~g~l~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Df 153 (303)
T cd05110 81 --PTIQLVTQLMPHGCLLDYVHEH--KDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDF 153 (303)
T ss_pred --CCceeeehhcCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEccc
Confidence 2357999999999999998753 23588999999999999999999997 9999999999999999999999999
Q ss_pred Cccccccccccc---ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccc
Q 003926 631 NLPLLAENAEKV---GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADES 706 (786)
Q Consensus 631 Gl~~~~~~~~~~---~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (786)
|+++........ ....++..|++||......++.++|||||||++|||++ |+.|+...........+.. ..
T Consensus 154 g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~----~~- 228 (303)
T cd05110 154 GLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEK----GE- 228 (303)
T ss_pred cccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHC----CC-
Confidence 998654322211 11223457899999888889999999999999999998 8888876543333332221 10
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
....+ ..+ ...+.+++.+||..+|++||+++|+++.+....
T Consensus 229 ---~~~~~---~~~----~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~ 269 (303)
T cd05110 229 ---RLPQP---PIC----TIDVYMVMVKCWMIDADSRPKFKELAAEFSRMA 269 (303)
T ss_pred ---CCCCC---CCC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 00001 111 235667888999999999999999999887554
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-35 Score=308.60 Aligned_cols=258 Identities=20% Similarity=0.359 Sum_probs=201.1
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
++|+..+.||.|+||+||+|... ++..+|+|++..... ...+.+.+|+++++.++|+||+++++.+.. .+.
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------~~~ 73 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVV-------GDE 73 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEee-------CCE
Confidence 46888999999999999999954 688999999875443 245679999999999999999999998764 456
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++||||+++++|.+++........+++.....++.|++.|++|||+. +++||||||+||++++++.+|++|||++.
T Consensus 74 ~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~ 150 (267)
T cd06610 74 LWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSA 150 (267)
T ss_pred EEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHH
Confidence 899999999999999997643334689999999999999999999987 99999999999999999999999999985
Q ss_pred cccccccc-----ccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccc
Q 003926 635 LAENAEKV-----GHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESAR 708 (786)
Q Consensus 635 ~~~~~~~~-----~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (786)
........ ....++..|++||.+... .++.++|||||||++|||++|+.|+......... .......
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~---~~~~~~~---- 223 (267)
T cd06610 151 SLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVL---MLTLQND---- 223 (267)
T ss_pred HhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhH---HHHhcCC----
Confidence 44322111 122456678999988766 6899999999999999999999998754332111 1111111
Q ss_pred cccccccccccC-cHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 709 RSMVDPAVNKAC-LDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 709 ~~~~d~~~~~~~-~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
.+...... .......+.+++.+||+.||++||++.|+++|+||
T Consensus 224 ----~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 224 ----PPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred ----CCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 01110000 11223456788889999999999999999998764
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=314.57 Aligned_cols=249 Identities=18% Similarity=0.319 Sum_probs=197.2
Q ss_pred cCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEEEEe
Q 003926 482 SAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFE 560 (786)
Q Consensus 482 ~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV~E 560 (786)
...||+|+||.||+|... +++.||+|++........+.+.+|+.+++.++||||+++++++.. .+..++|||
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~-------~~~~~iv~e 98 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLV-------GEELWVLME 98 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheee-------CCeEEEEEe
Confidence 457999999999999854 689999999976555556778999999999999999999998765 456899999
Q ss_pred cCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccccc-
Q 003926 561 YVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENA- 639 (786)
Q Consensus 561 y~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~- 639 (786)
|+++|+|.+++.. ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 99 ~~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~ 171 (297)
T cd06659 99 FLQGGALTDIVSQ----TRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV 171 (297)
T ss_pred cCCCCCHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhccccc
Confidence 9999999998754 3588999999999999999999997 9999999999999999999999999998543221
Q ss_pred cccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccccccccccc
Q 003926 640 EKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKA 719 (786)
Q Consensus 640 ~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 719 (786)
.......++..|+|||......++.++|||||||++|||++|++||...........+.. ... .. ....
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~---~~~---~~---~~~~-- 240 (297)
T cd06659 172 PKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRD---SPP---PK---LKNA-- 240 (297)
T ss_pred ccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---cCC---CC---cccc--
Confidence 112234466789999999888899999999999999999999999865443222111110 000 00 0000
Q ss_pred CcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 720 CLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 720 ~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
......+.+++.+||+.+|++||++.|+++|.++.+
T Consensus 241 --~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~ 276 (297)
T cd06659 241 --HKISPVLRDFLERMLTREPQERATAQELLDHPFLLQ 276 (297)
T ss_pred --CCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhcc
Confidence 111234567888999999999999999999998764
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-35 Score=304.60 Aligned_cols=246 Identities=25% Similarity=0.454 Sum_probs=196.8
Q ss_pred CccCCCCCceeEEEEecC----CcEEEEEEecccCCCC-hHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEE
Q 003926 483 AFMGEGSQGQMYRGRLKN----GTFVAIRCLKMKKCHS-TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFL 557 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~~----g~~vAvK~l~~~~~~~-~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~L 557 (786)
+.||+|+||.||+|.... +..||||.+....... .+.+.+|++.+++++|+||+++++++.. ....++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-------~~~~~l 73 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTE-------EEPLYL 73 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecC-------CCceEE
Confidence 468999999999999653 7899999998654433 5789999999999999999999998864 456899
Q ss_pred EEecCCCCChhHHhhcCCC------CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 558 IFEYVPNGTLRSWISEGHA------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 558 V~Ey~~~GsL~~~l~~~~~------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
||||+++|+|.+++..... ...+++..+..++.|+++|++|||+. +++||||||+||++++++.+|++|||
T Consensus 74 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg 150 (262)
T cd00192 74 VLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFG 150 (262)
T ss_pred EEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEcccc
Confidence 9999999999999986421 25689999999999999999999997 99999999999999999999999999
Q ss_pred ccccccccc---ccccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccc
Q 003926 632 LPLLAENAE---KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESA 707 (786)
Q Consensus 632 l~~~~~~~~---~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (786)
.+....... ......++..|+|||......++.++||||+||++|||++ |++|+...........+.. .
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~----~--- 223 (262)
T cd00192 151 LSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRK----G--- 223 (262)
T ss_pred cccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc----C---
Confidence 986554321 1222334567899999888889999999999999999999 6999876644333222211 0
Q ss_pred ccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 003926 708 RRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNL 753 (786)
Q Consensus 708 ~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l 753 (786)
... .. +......+.+++.+||+.+|++|||+.|++.++
T Consensus 224 -~~~---~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l 261 (262)
T cd00192 224 -YRL---PK----PEYCPDELYELMLSCWQLDPEDRPTFSELVERL 261 (262)
T ss_pred -CCC---CC----CccCChHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 000 01 111234677888999999999999999999876
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=313.57 Aligned_cols=265 Identities=20% Similarity=0.297 Sum_probs=195.6
Q ss_pred CCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
+|+..+.||+|+||.||+|+.+ +|+.||||+++.... .....+.+|++++++++||||+++++++.. .+.
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------~~~ 73 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT-------ENK 73 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhccc-------CCc
Confidence 4778899999999999999865 689999999875432 223578999999999999999999998764 456
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++||||+. ++|.+++.... ...+++.....++.|+++||+|||+. +++||||+|+||+++.++.+|++|||++.
T Consensus 74 ~~~v~e~~~-~~l~~~~~~~~-~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~ 148 (284)
T cd07860 74 LYLVFEFLH-QDLKKFMDASP-LSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 148 (284)
T ss_pred EEEEeeccc-cCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchh
Confidence 899999996 68999887532 34689999999999999999999987 99999999999999999999999999986
Q ss_pred cccccc-ccccccccccccCccccccCC-CCcccceeehhHHHHHHHhCCCCCCCchhH-HHHHHHHHHHHhccc-----
Q 003926 635 LAENAE-KVGHVIPYSGSIDPTNSARGK-LEEKIDIYDFGLILLEIIVGRPLKSRKEVD-LLKNQLQAVVTADES----- 706 (786)
Q Consensus 635 ~~~~~~-~~~~~~~~~~~~aPe~~~~~~-~t~ksDVwSfGvvl~ElltG~~p~~~~~~~-~~~~~~~~~~~~~~~----- 706 (786)
...... ......++..|++||...... ++.++|||||||++|||+||+.||...+.. ...............
T Consensus 149 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (284)
T cd07860 149 AFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 228 (284)
T ss_pred hcccCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhh
Confidence 443221 122223456789999876544 688999999999999999999998654332 222221111000000
Q ss_pred --------cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 707 --------ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 707 --------~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
.......... ..........+.+++.+||+.||++|||++|++.|+||
T Consensus 229 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 229 TSLPDYKPSFPKWARQDF-SKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred hHHHHHHhhcccccccCH-HHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 0000000000 00001112345678899999999999999999998774
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-35 Score=315.00 Aligned_cols=257 Identities=20% Similarity=0.388 Sum_probs=198.0
Q ss_pred hcCCCccCccCCCCCceeEEEEec--------CCcEEEEEEecccCC-CChHHHHHHHHHHhcC-CCCCcceeeeeeeec
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK--------NGTFVAIRCLKMKKC-HSTRNFMHHIELISKL-RHRHLVSALGHCFEC 545 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~ 545 (786)
.++|...+.||+|+||.||+|+.. ....||+|+++.... ....+|.+|+++++++ +||||++++++|..
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~- 89 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQ- 89 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc-
Confidence 356778899999999999999742 245799999875432 2345789999999999 69999999998864
Q ss_pred cccCCCCceEEEEEecCCCCChhHHhhcCCC-------------CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCC
Q 003926 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGHA-------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNL 612 (786)
Q Consensus 546 ~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdl 612 (786)
.+..++||||+++|+|.+++..... ...++|.+.+.++.|++.||.|||+. +++||||
T Consensus 90 ------~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dl 160 (314)
T cd05099 90 ------EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDL 160 (314)
T ss_pred ------CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---Ceeeccc
Confidence 3468999999999999999975321 23589999999999999999999987 9999999
Q ss_pred CCCceeecCCCcccccCCCccccccccccc---ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCc
Q 003926 613 KITDILLDQNLVAKISSYNLPLLAENAEKV---GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRK 688 (786)
Q Consensus 613 k~~NILld~~~~~kl~DfGl~~~~~~~~~~---~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~ 688 (786)
||+||+++.++.+|++|||+++........ .....+..|++||....+.++.++|||||||++|||++ |+.||...
T Consensus 161 kp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~ 240 (314)
T cd05099 161 AARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGI 240 (314)
T ss_pred cceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCC
Confidence 999999999999999999998654321111 11122346899999888889999999999999999999 88888765
Q ss_pred hhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 689 EVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
........+.. . ... .....+ ...+.+++.+||+.+|++||++.|+++.+....
T Consensus 241 ~~~~~~~~~~~----~--~~~-----~~~~~~----~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~ 294 (314)
T cd05099 241 PVEELFKLLRE----G--HRM-----DKPSNC----THELYMLMRECWHAVPTQRPTFKQLVEALDKVL 294 (314)
T ss_pred CHHHHHHHHHc----C--CCC-----CCCCCC----CHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 44333322211 0 000 111112 235668889999999999999999999887443
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-35 Score=308.41 Aligned_cols=249 Identities=18% Similarity=0.323 Sum_probs=194.8
Q ss_pred CCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCC---------hHHHHHHHHHHhcCCCCCcceeeeeeeecccc
Q 003926 479 FDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHS---------TRNFMHHIELISKLRHRHLVSALGHCFECYFD 548 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~---------~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~ 548 (786)
|.....||+|+||.||+|... +++.||+|.+....... .+.+.+|++++++++||||+++++++.+
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---- 77 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLD---- 77 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEe----
Confidence 556789999999999999854 68899999887543221 2468899999999999999999998765
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCccccc
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKIS 628 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~ 628 (786)
.+..++||||+++++|.+++... ..+++.....++.|++.|++|||+. +++||||||+||++++++.+||+
T Consensus 78 ---~~~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~ 148 (267)
T cd06628 78 ---ADHLNIFLEYVPGGSVAALLNNY---GAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKIS 148 (267)
T ss_pred ---CCccEEEEEecCCCCHHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEec
Confidence 35689999999999999999753 3588899999999999999999987 99999999999999999999999
Q ss_pred CCCcccccccccc-------cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHH
Q 003926 629 SYNLPLLAENAEK-------VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVV 701 (786)
Q Consensus 629 DfGl~~~~~~~~~-------~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~ 701 (786)
|||+++....... .....++..|++||......++.++|||||||++|||++|+.||......... ....
T Consensus 149 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~---~~~~ 225 (267)
T cd06628 149 DFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAI---FKIG 225 (267)
T ss_pred ccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHH---HHHh
Confidence 9999865432110 11223556789999988888999999999999999999999999754321111 1000
Q ss_pred HhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 702 TADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 702 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
. ...+..... ....+.+++.+||+.||.+||++.||+++.|+
T Consensus 226 ~--------~~~~~~~~~----~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 226 E--------NASPEIPSN----ISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred c--------cCCCcCCcc----cCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 0 011111111 22356678889999999999999999988653
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-35 Score=316.89 Aligned_cols=263 Identities=18% Similarity=0.270 Sum_probs=187.5
Q ss_pred cCccCCCCCceeEEEEec---CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEEE
Q 003926 482 SAFMGEGSQGQMYRGRLK---NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLI 558 (786)
Q Consensus 482 ~~~iG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV 558 (786)
...||+|+||.||+|+.+ ++..||+|.++... ....+.+|++++++++||||+++++++... .....++|
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~~~~lv 78 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSH-----SDRKVWLL 78 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEecc-----CCCeEEEE
Confidence 467999999999999865 45789999886543 345688999999999999999999987541 24568999
Q ss_pred EecCCCCChhHHhhcC------CCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceee----cCCCccccc
Q 003926 559 FEYVPNGTLRSWISEG------HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL----DQNLVAKIS 628 (786)
Q Consensus 559 ~Ey~~~GsL~~~l~~~------~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILl----d~~~~~kl~ 628 (786)
|||+++ +|.+++... .....+++.....++.|++.||.|||+. +|+||||||+||++ +.++.+||+
T Consensus 79 ~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~ 154 (317)
T cd07867 79 FDYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIA 154 (317)
T ss_pred EeeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEe
Confidence 999975 788777521 1123588999999999999999999997 99999999999999 566789999
Q ss_pred CCCccccccccc----ccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhH----------HH
Q 003926 629 SYNLPLLAENAE----KVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVD----------LL 693 (786)
Q Consensus 629 DfGl~~~~~~~~----~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~----------~~ 693 (786)
|||+++...... ......++..|+|||.+.. ..++.++|||||||++|||+||++||.....+ ..
T Consensus 155 DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~ 234 (317)
T cd07867 155 DMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQL 234 (317)
T ss_pred eccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHH
Confidence 999987553221 1123345678999998765 45899999999999999999999998643211 11
Q ss_pred HHHHHHHHHhcccccccc-----------------c-ccccc---ccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 003926 694 KNQLQAVVTADESARRSM-----------------V-DPAVN---KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWN 752 (786)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~-----------------~-d~~~~---~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 752 (786)
..............+... . .+... ..........+.+++.+|++.||.+|||+.|+++|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~h 314 (317)
T cd07867 235 DRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQD 314 (317)
T ss_pred HHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcC
Confidence 111110000000000000 0 00000 00000012346778899999999999999999998
Q ss_pred HHH
Q 003926 753 LQF 755 (786)
Q Consensus 753 l~~ 755 (786)
+||
T Consensus 315 p~f 317 (317)
T cd07867 315 PYF 317 (317)
T ss_pred CCC
Confidence 874
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-35 Score=303.86 Aligned_cols=249 Identities=21% Similarity=0.392 Sum_probs=196.4
Q ss_pred cCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~ 556 (786)
.+|+..+.||+|+||.||+|...++..+|+|.+.... ....+|.+|++++++++||||+++++++.. ....+
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------~~~~~ 75 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTE-------RSPIC 75 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEcc-------CCceE
Confidence 3566778999999999999998778899999887543 235679999999999999999999998754 34689
Q ss_pred EEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccc
Q 003926 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636 (786)
Q Consensus 557 LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~ 636 (786)
+||||+++|+|.+++.... ..+++.....++.+++.|++|||+. +++||||||+||+++.++.+||+|||++...
T Consensus 76 ~v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~ 150 (256)
T cd05112 76 LVFEFMEHGCLSDYLRAQR--GKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFV 150 (256)
T ss_pred EEEEcCCCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeec
Confidence 9999999999999997532 3578999999999999999999987 8999999999999999999999999998544
Q ss_pred ccccc--cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccccccccc
Q 003926 637 ENAEK--VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMVD 713 (786)
Q Consensus 637 ~~~~~--~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 713 (786)
..... ......+..|+|||....+.++.++|||||||++|||++ |+.|+...........+. .. .....
T Consensus 151 ~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~----~~----~~~~~ 222 (256)
T cd05112 151 LDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETIN----AG----FRLYK 222 (256)
T ss_pred ccCcccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHh----CC----CCCCC
Confidence 22111 111223357899999888889999999999999999998 999987654333222211 00 01111
Q ss_pred ccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 003926 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNL 753 (786)
Q Consensus 714 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l 753 (786)
+.. ....+.+++.+||+.+|++|||+.||++++
T Consensus 223 ~~~-------~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 223 PRL-------ASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred CCC-------CCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 111 124577889999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=326.32 Aligned_cols=266 Identities=15% Similarity=0.208 Sum_probs=197.7
Q ss_pred hcCCCccCccCCCCCceeEEEEec---CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK---NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
..+|...+.||+|+||.||+|... .+..||||.+... +.+.+|++++++++|||||++++++.. .
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~-------~ 158 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRW-------K 158 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEee-------C
Confidence 346888999999999999999753 3678999987643 235689999999999999999988754 3
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
...++||||+. ++|.+++.. ...+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 159 ~~~~lv~e~~~-~~l~~~l~~---~~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~ 231 (392)
T PHA03207 159 STVCMVMPKYK-CDLFTYVDR---SGPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGA 231 (392)
T ss_pred CEEEEEehhcC-CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCcc
Confidence 56899999996 689998843 24689999999999999999999997 999999999999999999999999999
Q ss_pred ccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchh----HHHHHHHHHHHHhcc
Q 003926 633 PLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEV----DLLKNQLQAVVTADE 705 (786)
Q Consensus 633 ~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~----~~~~~~~~~~~~~~~ 705 (786)
+........ .....++..|+|||.+....|+.++|||||||++|||++|+.||..... ..+...+........
T Consensus 232 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~ 311 (392)
T PHA03207 232 ACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPL 311 (392)
T ss_pred ccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCcc
Confidence 865432211 1234577889999999888899999999999999999999999854321 122222111100000
Q ss_pred ccc--------------ccccccccc-ccCc--HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 003926 706 SAR--------------RSMVDPAVN-KACL--DESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760 (786)
Q Consensus 706 ~~~--------------~~~~d~~~~-~~~~--~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~ 760 (786)
... .....+... .... .....++.+++.+||+.||++|||+.|++.|+||.+...
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~~ 383 (392)
T PHA03207 312 EFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEPI 383 (392)
T ss_pred ccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhccch
Confidence 000 000000000 0000 001234567888999999999999999999999976433
|
|
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-35 Score=308.38 Aligned_cols=251 Identities=21% Similarity=0.381 Sum_probs=195.0
Q ss_pred cCCCccCccCCCCCceeEEEEec-C---CcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-N---GTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~---g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
.+|+..+.||+|+||.||+|+.. + +..+|+|.++.... ...+.|.+|+.++++++||||+++++++..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------- 76 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK------- 76 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-------
Confidence 45778899999999999999853 2 34799999875432 224679999999999999999999998764
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
.+..++||||+++|+|.+++.... ..+++.+...++.|++.|++|||+. +++||||||+||+++.++.+|++|||
T Consensus 77 ~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg 151 (267)
T cd05066 77 SKPVMIVTEYMENGSLDAFLRKHD--GQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFG 151 (267)
T ss_pred CCccEEEEEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCC
Confidence 356899999999999999997532 3589999999999999999999997 99999999999999999999999999
Q ss_pred ccccccccccc----ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccc
Q 003926 632 LPLLAENAEKV----GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADES 706 (786)
Q Consensus 632 l~~~~~~~~~~----~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (786)
++......... .....+..|++||......++.++||||||+++||+++ |+.||...........+. ..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~----~~-- 225 (267)
T cd05066 152 LSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIE----EG-- 225 (267)
T ss_pred cccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHh----CC--
Confidence 98654322111 11112346899999988889999999999999999887 999986544332222211 10
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
.+ ..... ..+..+.+++.+||+.+|.+||+|.++++.+.
T Consensus 226 -~~----~~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 264 (267)
T cd05066 226 -YR----LPAPM----DCPAALHQLMLDCWQKDRNERPKFEQIVSILD 264 (267)
T ss_pred -Cc----CCCCC----CCCHHHHHHHHHHcccCchhCCCHHHHHHHHH
Confidence 00 00011 11235668888999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-35 Score=306.14 Aligned_cols=257 Identities=17% Similarity=0.268 Sum_probs=200.8
Q ss_pred CCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 478 NFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
+|+..+.||.|+||.||+|.. .+|+.||+|++...... ..+.+.+|++++++++|+||+++++++.. .....
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~ 75 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIID-----RSNQT 75 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeec-----CCCCE
Confidence 467788999999999999985 46889999998754332 24568899999999999999999987753 12356
Q ss_pred EEEEEecCCCCChhHHhhcC-CCCCCCCHHHHHHHHHHHHHHhhhhhcCC--CCCccccCCCCCceeecCCCcccccCCC
Q 003926 555 IFLIFEYVPNGTLRSWISEG-HAHQSLTWTQRISAAIGVAKGIQFLHTGI--VPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~ia~~ia~gL~yLH~~~--~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
.+++|||+++|+|.+++... .....+++...+.++.+++.||+|||..+ ..+++|+||||+||+++.++.+|++|||
T Consensus 76 ~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g 155 (265)
T cd08217 76 LYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFG 155 (265)
T ss_pred EEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccc
Confidence 79999999999999998753 22346899999999999999999999321 2499999999999999999999999999
Q ss_pred cccccccccc-cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 632 LPLLAENAEK-VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 632 l~~~~~~~~~-~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
++........ .....++..|++||......++.++||||||+++|||++|+.|+...+.......+.. . .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~----~--~--- 226 (265)
T cd08217 156 LAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKE----G--K--- 226 (265)
T ss_pred ccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhc----C--C---
Confidence 9865543322 2233466789999998888899999999999999999999999976543332221111 0 0
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
.+.+ +......+.+++.+|++.+|++||++.||++|++
T Consensus 227 --~~~~----~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~ 264 (265)
T cd08217 227 --FRRI----PYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPL 264 (265)
T ss_pred --CCCC----ccccCHHHHHHHHHHccCCcccCCCHHHHhhCCC
Confidence 0111 1122346678889999999999999999998865
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-35 Score=313.76 Aligned_cols=266 Identities=21% Similarity=0.309 Sum_probs=199.0
Q ss_pred CCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC-----ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 479 FDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH-----STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-----~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
|+..+.||+|+||.||+|... +|+.||||+++..... ....+.+|++++++++|+||+++++++.. .
T Consensus 2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-------~ 74 (298)
T cd07841 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGH-------K 74 (298)
T ss_pred ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeec-------C
Confidence 667789999999999999965 6899999999765432 23457889999999999999999998865 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..++||||+ +|+|.+++.... ..+++..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||+
T Consensus 75 ~~~~lv~e~~-~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~ 148 (298)
T cd07841 75 SNINLVFEFM-ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGL 148 (298)
T ss_pred CEEEEEEccc-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEcccee
Confidence 5689999999 899999997532 3689999999999999999999997 999999999999999999999999999
Q ss_pred cccccccc-ccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhH-HHHHHHHHHHHhcccccc
Q 003926 633 PLLAENAE-KVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVD-LLKNQLQAVVTADESARR 709 (786)
Q Consensus 633 ~~~~~~~~-~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~~ 709 (786)
+....... ......++..|+|||.+.. ..++.++|||||||++|||++|.+|+...... ..................
T Consensus 149 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (298)
T cd07841 149 ARSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWP 228 (298)
T ss_pred eeeccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhh
Confidence 86543321 1222234567899998754 45789999999999999999998887654332 222211111000000000
Q ss_pred ------ccccccc-----cccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 710 ------SMVDPAV-----NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 710 ------~~~d~~~-----~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
....... ...........+.+++.+||+.+|++|||+.||+.|.||..
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~ 287 (298)
T cd07841 229 GVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSN 287 (298)
T ss_pred hcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccC
Confidence 0000000 00011223456778999999999999999999999988765
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-35 Score=328.03 Aligned_cols=260 Identities=15% Similarity=0.186 Sum_probs=194.1
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
.+|...+.||+|+||.||+|+.. +++.||||... ...+.+|++++++++|+|||++++++.. .+..
T Consensus 169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~-------~~~~ 235 (461)
T PHA03211 169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVV-------GGLT 235 (461)
T ss_pred CCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEE-------CCEE
Confidence 46888999999999999999965 58899999532 2346789999999999999999998865 3568
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
++||||+. |+|.+++.... ..++|.+++.++.|+++||.|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 236 ~lv~e~~~-~~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~ 309 (461)
T PHA03211 236 CLVLPKYR-SDLYTYLGARL--RPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACF 309 (461)
T ss_pred EEEEEccC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCcee
Confidence 99999995 79999886532 3699999999999999999999997 999999999999999999999999999865
Q ss_pred cccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCC-CCc-------hhHHHHHHHHHHHHhc
Q 003926 636 AENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLK-SRK-------EVDLLKNQLQAVVTAD 704 (786)
Q Consensus 636 ~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~-~~~-------~~~~~~~~~~~~~~~~ 704 (786)
...... .....++..|++||.+....++.++|||||||++|||++|..++ ... ....+...+.......
T Consensus 310 ~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~ 389 (461)
T PHA03211 310 ARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHV 389 (461)
T ss_pred cccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhcccc
Confidence 432211 12345788999999998888999999999999999999987543 211 0112222222211100
Q ss_pred ccccccc----------------ccccccccCcH---HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 705 ESARRSM----------------VDPAVNKACLD---ESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 705 ~~~~~~~----------------~d~~~~~~~~~---~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
. ..... ..+........ .....+.+++.+||+.||.+|||+.|+++|.||.
T Consensus 390 ~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~ 459 (461)
T PHA03211 390 D-EFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQ 459 (461)
T ss_pred c-cCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccC
Confidence 0 00000 00000000000 1123567888999999999999999999999874
|
|
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=309.22 Aligned_cols=239 Identities=20% Similarity=0.337 Sum_probs=183.7
Q ss_pred CccCCCCCceeEEEEecC--------CcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 483 AFMGEGSQGQMYRGRLKN--------GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~~--------g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
+.||+|+||.||+|..+. ...||+|.+........++|.+|+.+++.++|||||++++++.. .+.
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~-------~~~ 73 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVC-------GDE 73 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEe-------CCC
Confidence 368999999999998542 23488888765544445679999999999999999999999875 345
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCc--------cc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV--------AK 626 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~--------~k 626 (786)
.++||||+++|+|.++++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.+.. +|
T Consensus 74 ~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~ 148 (258)
T cd05078 74 SIMVQEYVKFGSLDTYLKKNK--NLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIK 148 (258)
T ss_pred cEEEEecCCCCcHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEE
Confidence 799999999999999997643 3689999999999999999999997 9999999999999988765 58
Q ss_pred ccCCCcccccccccccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCC-CCCCCchhHHHHHHHHHHHHhc
Q 003926 627 ISSYNLPLLAENAEKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTAD 704 (786)
Q Consensus 627 l~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~-~p~~~~~~~~~~~~~~~~~~~~ 704 (786)
++|||++...... ....++..|+|||.+.. ..++.++|||||||++|||++|. +|+...+........ ..
T Consensus 149 l~d~g~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~-----~~ 220 (258)
T cd05078 149 LSDPGISITVLPK---EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFY-----ED 220 (258)
T ss_pred ecccccccccCCc---hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHH-----Hc
Confidence 9999987544321 12345567999998876 35799999999999999999984 665543322211110 00
Q ss_pred cccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 003926 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNL 753 (786)
Q Consensus 705 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l 753 (786)
.. .++.. ...++.+++.+||+.||++|||++|+++.+
T Consensus 221 ---~~-----~~~~~----~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 221 ---RH-----QLPAP----KWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred ---cc-----cCCCC----CcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 00 01111 113567888999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=319.47 Aligned_cols=265 Identities=22% Similarity=0.295 Sum_probs=205.5
Q ss_pred CCCccCccCCCCCceeEEEE-ecCCcEEEEEEecccCCCChHHHHHHHHHHhcCC-CC-----CcceeeeeeeeccccCC
Q 003926 478 NFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLR-HR-----HLVSALGHCFECYFDDS 550 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~-----NIv~l~g~~~~~~~~~~ 550 (786)
.|.+.+.||+|+||.|-||. .++++.||||+++... ....+-..|+.+|..++ |. |+|++++|+..
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~f------ 259 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYF------ 259 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccc------
Confidence 57888999999999999998 5679999999998654 23455677999999997 43 99999999875
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC--ccccc
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL--VAKIS 628 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~--~~kl~ 628 (786)
.++.|||+|.+.. +|+++|+..+. ..++......++.||+.||.+||.. +|||+||||+||||.+-. .+||.
T Consensus 260 -r~HlciVfELL~~-NLYellK~n~f-~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVI 333 (586)
T KOG0667|consen 260 -RNHLCIVFELLST-NLYELLKNNKF-RGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVI 333 (586)
T ss_pred -ccceeeeehhhhh-hHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEE
Confidence 5789999999976 99999987543 4689999999999999999999987 999999999999997543 68999
Q ss_pred CCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCch-hHHHHHHHHHHHHhcc--
Q 003926 629 SYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVVTADE-- 705 (786)
Q Consensus 629 DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~-~~~~~~~~~~~~~~~~-- 705 (786)
|||.++...... ...+.+..|.|||++.+..|+++.||||||||+.||++|.|.|.+.+ .+.+..+++.......
T Consensus 334 DFGSSc~~~q~v--ytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~m 411 (586)
T KOG0667|consen 334 DFGSSCFESQRV--YTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKM 411 (586)
T ss_pred ecccccccCCcc--eeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHH
Confidence 999997764432 25566788999999999999999999999999999999999887654 3444443332211100
Q ss_pred ------------c---cc-----cc-----------------ccccccc-c-----c-CcHHHHHHHHHHHHHhccCCCC
Q 003926 706 ------------S---AR-----RS-----------------MVDPAVN-K-----A-CLDESLKTMMEVCVRCLLKNPA 741 (786)
Q Consensus 706 ------------~---~~-----~~-----------------~~d~~~~-~-----~-~~~~~~~~~~~l~~~Cl~~dP~ 741 (786)
. .. .+ ..+...+ . . .....-..+++++.+|+..||+
T Consensus 412 L~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~ 491 (586)
T KOG0667|consen 412 LDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPA 491 (586)
T ss_pred HHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCch
Confidence 0 00 00 0000000 0 0 0012234678999999999999
Q ss_pred CCCCHHHHHHHHHHHH
Q 003926 742 ERPSVEDVLWNLQFAA 757 (786)
Q Consensus 742 ~RPt~~evl~~l~~~~ 757 (786)
+|+|..|+++|+|+..
T Consensus 492 ~R~tp~qal~Hpfl~~ 507 (586)
T KOG0667|consen 492 ERITPAQALNHPFLTG 507 (586)
T ss_pred hcCCHHHHhcCccccc
Confidence 9999999999999774
|
|
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-35 Score=305.95 Aligned_cols=251 Identities=18% Similarity=0.316 Sum_probs=198.3
Q ss_pred CCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 478 NFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
+|+..+.||+|+||.||+|.. .+++.+|||++..... ...+.+.+|++++++++||||+++++.+.. .+.
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-------~~~ 73 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLE-------DKA 73 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEec-------CCE
Confidence 467789999999999999985 4688999999875432 234679999999999999999999987754 456
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCC-CcccccCCCcc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN-LVAKISSYNLP 633 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~-~~~kl~DfGl~ 633 (786)
.++||||+++|+|.+++.... ...+++..+..++.++++|++|||+. +++||||||+||+++++ ..+|++|||++
T Consensus 74 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~ 149 (256)
T cd08220 74 LMIVMEYAPGGTLAEYIQKRC-NSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGIS 149 (256)
T ss_pred EEEEEecCCCCCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCc
Confidence 899999999999999997632 24589999999999999999999997 99999999999999855 46899999998
Q ss_pred cccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccccc
Q 003926 634 LLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVD 713 (786)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 713 (786)
.............++..|++||......++.++|||||||++|||++|+.|+...+.......+ .... ...
T Consensus 150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~---~~~~---~~~--- 220 (256)
T cd08220 150 KILSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKI---MSGT---FAP--- 220 (256)
T ss_pred eecCCCccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHH---HhcC---CCC---
Confidence 6554333333345667899999988888899999999999999999999998765433222111 1110 000
Q ss_pred ccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 714 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
. ++.....+.+++.+||+.+|++|||+.|+++|++
T Consensus 221 --~----~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~ 255 (256)
T cd08220 221 --I----SDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPI 255 (256)
T ss_pred --C----CCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCC
Confidence 1 1112235668888999999999999999998864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-35 Score=315.64 Aligned_cols=256 Identities=20% Similarity=0.374 Sum_probs=197.7
Q ss_pred cCCCccCccCCCCCceeEEEEec--------CCcEEEEEEecccCC-CChHHHHHHHHHHhcC-CCCCcceeeeeeeecc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK--------NGTFVAIRCLKMKKC-HSTRNFMHHIELISKL-RHRHLVSALGHCFECY 546 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~ 546 (786)
.+|...+.||+|+||.||+|+.. .+..||+|.++.... ...++|.+|+++++++ +||||++++++|..
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-- 89 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-- 89 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc--
Confidence 35778899999999999999742 124799998875432 2346799999999999 89999999998865
Q ss_pred ccCCCCceEEEEEecCCCCChhHHhhcCC-------------CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCC
Q 003926 547 FDDSSVSRIFLIFEYVPNGTLRSWISEGH-------------AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLK 613 (786)
Q Consensus 547 ~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~-------------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk 613 (786)
.+..++||||+++|+|.+++.... ....++|.+++.++.|+++||+|||+. +++|||||
T Consensus 90 -----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlk 161 (334)
T cd05100 90 -----DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLA 161 (334)
T ss_pred -----CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---Ceeccccc
Confidence 346899999999999999997532 123588999999999999999999997 99999999
Q ss_pred CCceeecCCCcccccCCCccccccccccc---ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCch
Q 003926 614 ITDILLDQNLVAKISSYNLPLLAENAEKV---GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKE 689 (786)
Q Consensus 614 ~~NILld~~~~~kl~DfGl~~~~~~~~~~---~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~ 689 (786)
|+||++++++.+||+|||+++........ ....++..|+|||......++.++|||||||++|||++ |.+|+....
T Consensus 162 p~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~ 241 (334)
T cd05100 162 ARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP 241 (334)
T ss_pred cceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCC
Confidence 99999999999999999998654322111 11122346899999988889999999999999999998 888887654
Q ss_pred hHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 690 VDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.+.....+. .. ...+ ... .....+.+++.+||+.+|++||++.|+++++....
T Consensus 242 ~~~~~~~~~----~~--~~~~-----~~~----~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~ 294 (334)
T cd05100 242 VEELFKLLK----EG--HRMD-----KPA----NCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVL 294 (334)
T ss_pred HHHHHHHHH----cC--CCCC-----CCC----CCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence 433322211 00 0000 111 11235678889999999999999999999997554
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-35 Score=306.27 Aligned_cols=249 Identities=22% Similarity=0.362 Sum_probs=195.6
Q ss_pred CCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC-----CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 479 FDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-----HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-----~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
|+..+.||+|+||+||+|..+ ++..||+|.+..... ...+.|.+|++++++++|+||+++++++.. .
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-------~ 74 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTERE-------E 74 (258)
T ss_pred ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEec-------C
Confidence 566789999999999999965 789999999865432 134678999999999999999999998764 3
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
...++||||+++++|.+++... ..+++.....++.|+++|++|||+. +++|+||+|+||+++.++.+||+|||+
T Consensus 75 ~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~ 148 (258)
T cd06632 75 DNLYIFLELVPGGSLAKLLKKY---GSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGM 148 (258)
T ss_pred CeEEEEEEecCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCcc
Confidence 5689999999999999999753 3588999999999999999999997 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCccccccCC-CCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGK-LEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
+.............++..|++||...... ++.++|||||||++|||++|++||......... .. ..... ..
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~--~~-~~~~~--~~--- 220 (258)
T cd06632 149 AKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAV--FK-IGRSK--EL--- 220 (258)
T ss_pred ceeccccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHH--HH-HHhcc--cC---
Confidence 86543332222334566789999887666 899999999999999999999998754321111 11 10000 00
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
+.+. ......+.+++.+||+.+|++||++.|++.|+|
T Consensus 221 --~~~~----~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~ 257 (258)
T cd06632 221 --PPIP----DHLSDEAKDFILKCLQRDPSLRPTAAELLEHPF 257 (258)
T ss_pred --CCcC----CCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCC
Confidence 1111 111234567888999999999999999998765
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-35 Score=311.18 Aligned_cols=269 Identities=19% Similarity=0.340 Sum_probs=203.4
Q ss_pred cCHHHHHHHhcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcC-CCCCcceeeeeeee
Q 003926 467 FSLEELEEATNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKL-RHRHLVSALGHCFE 544 (786)
Q Consensus 467 ~~~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~ 544 (786)
.++.++..+.+.|+..+.||+|+||.||+|+. .+++.||+|.+.... ....++..|+.+++++ +|+||+++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 34556666778889999999999999999996 468999999886543 2345688999999998 79999999998864
Q ss_pred ccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCc
Q 003926 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV 624 (786)
Q Consensus 545 ~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~ 624 (786)
... ....+..++||||+++|+|.+++.... ...+++.....++.|+++|++|||+. +|+||||||+||++++++.
T Consensus 85 ~~~-~~~~~~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~~ 159 (282)
T cd06636 85 KSP-PGHDDQLWLVMEFCGAGSVTDLVKNTK-GNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAE 159 (282)
T ss_pred ccc-cCCCCEEEEEEEeCCCCcHHHHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCC
Confidence 211 112457899999999999999987532 23578888899999999999999997 9999999999999999999
Q ss_pred ccccCCCcccccccc-cccccccccccccCccccc-----cCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHH
Q 003926 625 AKISSYNLPLLAENA-EKVGHVIPYSGSIDPTNSA-----RGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQ 698 (786)
Q Consensus 625 ~kl~DfGl~~~~~~~-~~~~~~~~~~~~~aPe~~~-----~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~ 698 (786)
+||+|||++...... .......++..|+|||.+. ...++.++|||||||++|||++|++||...........+
T Consensus 160 ~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~- 238 (282)
T cd06636 160 VKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLI- 238 (282)
T ss_pred EEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhH-
Confidence 999999998644321 1122334567799999865 345888999999999999999999998654321111000
Q ss_pred HHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 699 AVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 699 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
... ..+... .......+.+++.+||+.||.+||++.|+++|.|+
T Consensus 239 --~~~--------~~~~~~---~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 239 --PRN--------PPPKLK---SKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred --hhC--------CCCCCc---ccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 000 001111 01122457788889999999999999999988763
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-35 Score=303.47 Aligned_cols=249 Identities=17% Similarity=0.240 Sum_probs=196.3
Q ss_pred CCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC-CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK-CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
+|+..+.||+|+||.||++... ++..||+|.++... ....+.+.+|+.++++++|+||+++++++.. .+..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~~~ 73 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEA-------DGHL 73 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEE-------CCEE
Confidence 4677899999999999999854 68999999986543 2335678899999999999999999998764 4578
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
++||||+++|+|.+++.... ...++......++.|++.||.|||+. +|+|+||||+||++++++.++++|||.+..
T Consensus 74 ~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~ 149 (255)
T cd08219 74 YIVMEYCDGGDLMQKIKLQR-GKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARL 149 (255)
T ss_pred EEEEeeCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCccee
Confidence 99999999999999986532 23578889999999999999999997 999999999999999999999999999865
Q ss_pred ccccc-ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccc
Q 003926 636 AENAE-KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDP 714 (786)
Q Consensus 636 ~~~~~-~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 714 (786)
..... ......++..|+|||......++.++||||||+++|||++|++||...+.......+ ... ....
T Consensus 150 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~---~~~---~~~~---- 219 (255)
T cd08219 150 LTSPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKV---CQG---SYKP---- 219 (255)
T ss_pred ecccccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHH---hcC---CCCC----
Confidence 43221 112234566799999988888999999999999999999999999765433221111 110 0000
Q ss_pred cccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 003926 715 AVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWN 752 (786)
Q Consensus 715 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 752 (786)
+. ......+.+++.+||+.||++||++.||+..
T Consensus 220 -~~----~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 220 -LP----SHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred -CC----cccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 11 1122346678889999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-36 Score=311.62 Aligned_cols=255 Identities=22% Similarity=0.421 Sum_probs=197.9
Q ss_pred CCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCCh--HHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 479 FDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHST--RNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~--~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
|+..+.||+|+||+||+++.. +++.||+|++........ ....+|+.++++++||||+++++++.. ....
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-------~~~~ 73 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQD-------DNYL 73 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEE-------SSEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccc-------cccc
Confidence 456789999999999999965 577999999986643222 234569999999999999999998875 4668
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
++||||+++|+|.+++.. ...+++..+..++.|+++||.|||+. +|+||||||+||++++++.++|+|||.+..
T Consensus 74 ~~v~~~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~ 147 (260)
T PF00069_consen 74 YIVMEYCPGGSLQDYLQK---NKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVK 147 (260)
T ss_dssp EEEEEEETTEBHHHHHHH---HSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEE
T ss_pred cccccccccccccccccc---cccccccccccccccccccccccccc---cccccccccccccccccccccccccccccc
Confidence 999999999999999983 24689999999999999999999997 999999999999999999999999999864
Q ss_pred c-ccccccccccccccccCccccc-cCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccccc
Q 003926 636 A-ENAEKVGHVIPYSGSIDPTNSA-RGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVD 713 (786)
Q Consensus 636 ~-~~~~~~~~~~~~~~~~aPe~~~-~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 713 (786)
. ..........++..|.|||... ...++.++||||+|+++|||++|+.|+.................... .
T Consensus 148 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~-------~ 220 (260)
T PF00069_consen 148 LSENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPL-------P 220 (260)
T ss_dssp STSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHH-------H
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccc-------c
Confidence 2 2222333445667899999987 67899999999999999999999999886522222222211111000 0
Q ss_pred ccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 714 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
.... ........+.+++.+||+.||++||++.|+++|+||
T Consensus 221 ~~~~--~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 221 SSSQ--QSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp HHTT--SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred cccc--ccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 0000 000011467788889999999999999999998874
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-35 Score=307.22 Aligned_cols=252 Identities=17% Similarity=0.333 Sum_probs=195.3
Q ss_pred cCCCccCccCCCCCceeEEEEecC----CcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKN----GTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~----g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
++|...+.||+|+||.||+|...+ ...||||....... ...+.|.+|+.++++++||||++++++|..
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~------- 78 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE------- 78 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-------
Confidence 346678899999999999998643 34789998875542 335679999999999999999999998753
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
+..++||||+++|+|.+++.... ..+++..+..++.++++||+|||+. +++||||||+||+++.++.+|++|||
T Consensus 79 -~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g 152 (270)
T cd05056 79 -NPVWIVMELAPLGELRSYLQVNK--YSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFG 152 (270)
T ss_pred -CCcEEEEEcCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCc
Confidence 34689999999999999997532 3589999999999999999999987 99999999999999999999999999
Q ss_pred cccccccccccc--cccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccccc
Q 003926 632 LPLLAENAEKVG--HVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESAR 708 (786)
Q Consensus 632 l~~~~~~~~~~~--~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (786)
+++......... .......|+|||......++.++|||||||++|||++ |++||...........+.. . ..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~----~--~~ 226 (270)
T cd05056 153 LSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIEN----G--ER 226 (270)
T ss_pred eeeecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc----C--Cc
Confidence 986543322111 1112246899999887889999999999999999996 9999876543322221110 0 00
Q ss_pred cccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 709 RSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 709 ~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
......+ ...+.+++.+|+..+|++|||+.|++..+...
T Consensus 227 -----~~~~~~~----~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~ 265 (270)
T cd05056 227 -----LPMPPNC----PPTLYSLMTKCWAYDPSKRPRFTELKAQLSDI 265 (270)
T ss_pred -----CCCCCCC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 0111112 23567788899999999999999999998743
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-35 Score=305.92 Aligned_cols=249 Identities=20% Similarity=0.320 Sum_probs=181.8
Q ss_pred ccCCCCCceeEEEEecC---CcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEEEE
Q 003926 484 FMGEGSQGQMYRGRLKN---GTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIF 559 (786)
Q Consensus 484 ~iG~G~fg~Vy~~~~~~---g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV~ 559 (786)
.||+|+||+||+|...+ ...+|+|.+...... ....|.+|+++++.++|+||++++|+|.. ....++||
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~-------~~~~~lv~ 74 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIE-------SIPYLLVL 74 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECC-------CCceEEEE
Confidence 58999999999997543 457888887644322 24578999999999999999999998865 35689999
Q ss_pred ecCCCCChhHHhhcCCC--CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccc
Q 003926 560 EYVPNGTLRSWISEGHA--HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637 (786)
Q Consensus 560 Ey~~~GsL~~~l~~~~~--~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~ 637 (786)
||+++|+|.+++..... ....++.....++.|+++|++|||+. +|+||||||+||++++++.+||+|||++....
T Consensus 75 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~ 151 (269)
T cd05042 75 EFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQY 151 (269)
T ss_pred EeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccc
Confidence 99999999999976432 22356788889999999999999997 99999999999999999999999999985432
Q ss_pred cccc---cccccccccccCcccccc-------CCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccc
Q 003926 638 NAEK---VGHVIPYSGSIDPTNSAR-------GKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADES 706 (786)
Q Consensus 638 ~~~~---~~~~~~~~~~~aPe~~~~-------~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (786)
.... .....++..|+|||.... ..++.++|||||||++|||++ |++|+............ ....
T Consensus 152 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~---~~~~-- 226 (269)
T cd05042 152 PEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQV---VREQ-- 226 (269)
T ss_pred cchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHH---hhcc--
Confidence 2111 111223446899997542 356889999999999999999 77888654332211111 1111
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNL 753 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l 753 (786)
.....++....... ..+.+++..|| .||++|||++||++.+
T Consensus 227 -~~~~~~~~~~~~~~----~~~~~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 227 -DIKLPKPQLDLKYS----DRWYEVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred -CccCCCCcccccCC----HHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence 11122222222222 23445667888 5999999999999875
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-35 Score=312.05 Aligned_cols=265 Identities=18% Similarity=0.294 Sum_probs=199.4
Q ss_pred CCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
+|+..+.||+|+||.||+|..+ +++.||||+++.... ...+.+.+|++++++++|+||+++++++.. .+.
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------~~~ 74 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRR-------KGR 74 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEE-------CCE
Confidence 5778899999999999999965 688999999875432 234679999999999999999999999865 456
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++||||++++.+..+.... ..+++.....++.+++.||+|||+. +++||||+|+||++++++.+||+|||++.
T Consensus 75 ~~iv~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~ 148 (288)
T cd07833 75 LYLVFEYVERTLLELLEASP---GGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFAR 148 (288)
T ss_pred EEEEEecCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeeccc
Confidence 89999999987777666542 3489999999999999999999997 99999999999999999999999999986
Q ss_pred cccccc--ccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccc----
Q 003926 635 LAENAE--KVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESA---- 707 (786)
Q Consensus 635 ~~~~~~--~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~---- 707 (786)
...... ......++..|+|||..... .++.++||||||+++|||++|++|+......................
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (288)
T cd07833 149 ALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQEL 228 (288)
T ss_pred ccCCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhh
Confidence 554332 22233456679999998777 78999999999999999999999987543322111111111000000
Q ss_pred -----------cccccccc-ccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 708 -----------RRSMVDPA-VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 708 -----------~~~~~d~~-~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
..+..++. .....+......+.+++.+||..+|++||++++++++.||
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 229 FSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred cccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 00000000 0000111224567889999999999999999999988764
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-35 Score=310.00 Aligned_cols=259 Identities=16% Similarity=0.294 Sum_probs=196.1
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC-CChHHHHHHHHH-HhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIEL-ISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~-l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
++|+..+.||+|+||.||+|+.+ +|+.||+|+++.... ....++..|+.+ ++..+||||+++++++.. .+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~-------~~ 73 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFR-------EG 73 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEec-------CC
Confidence 46888899999999999999965 699999999876532 233456667765 666799999999998864 34
Q ss_pred eEEEEEecCCCCChhHHhhcC-CCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 554 RIFLIFEYVPNGTLRSWISEG-HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
..++||||++ |+|.+++... .....+++.....++.|++.||+|||++ .+++||||||+||+++.++.+||+|||+
T Consensus 74 ~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--~~i~h~dlkp~nil~~~~~~~kl~dfg~ 150 (283)
T cd06617 74 DVWICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSK--LSVIHRDVKPSNVLINRNGQVKLCDFGI 150 (283)
T ss_pred cEEEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeeccc
Confidence 6899999997 6898887642 2234689999999999999999999974 3799999999999999999999999999
Q ss_pred ccccccccccccccccccccCcccccc----CCCCcccceeehhHHHHHHHhCCCCCCCch--hHHHHHHHHHHHHhccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSAR----GKLEEKIDIYDFGLILLEIIVGRPLKSRKE--VDLLKNQLQAVVTADES 706 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~----~~~t~ksDVwSfGvvl~ElltG~~p~~~~~--~~~~~~~~~~~~~~~~~ 706 (786)
+.............++..|++||.+.. ..++.++|||||||++|||++|+.|+.... .+.+... ...
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~----~~~--- 223 (283)
T cd06617 151 SGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQV----VEE--- 223 (283)
T ss_pred ccccccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHH----Hhc---
Confidence 865432222222345667899997754 446889999999999999999999986422 1111111 110
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~ 760 (786)
..+..... .....+.+++.+||..+|++||++.||++|.|+.....
T Consensus 224 -----~~~~~~~~---~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 269 (283)
T cd06617 224 -----PSPQLPAE---KFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHLS 269 (283)
T ss_pred -----CCCCCCcc---ccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhccc
Confidence 01111111 11235678888999999999999999999999887543
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-35 Score=310.27 Aligned_cols=255 Identities=18% Similarity=0.315 Sum_probs=201.7
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
.+|+..+.||+|+||.||+|.. .++..||+|.+........+.|.+|+.++++++||||+++++++.. .+..
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~-------~~~~ 91 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLV-------GDEL 91 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeee-------CCcE
Confidence 5677889999999999999985 4688999999876554556779999999999999999999998865 3568
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
|+|+||+++|+|.+++.+. .+++..+..++.+++.|+.|||+. +++||||||+||+++.++.+||+|||++..
T Consensus 92 ~lv~e~~~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~ 164 (293)
T cd06647 92 WVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQ 164 (293)
T ss_pred EEEEecCCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceec
Confidence 9999999999999999752 478999999999999999999997 999999999999999999999999998754
Q ss_pred ccccc-ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccc
Q 003926 636 AENAE-KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDP 714 (786)
Q Consensus 636 ~~~~~-~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 714 (786)
..... ......++..|++||......++.++|||||||++||+++|++||...........+. ... . +
T Consensus 165 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~---~~~---~-----~ 233 (293)
T cd06647 165 ITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIA---TNG---T-----P 233 (293)
T ss_pred ccccccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehh---cCC---C-----C
Confidence 43221 1222345667999999888889999999999999999999999997543221100000 000 0 0
Q ss_pred cccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 715 AVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 715 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
.. .........+.+++.+||+.+|++||++.|++.|.||...
T Consensus 234 ~~--~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~ 275 (293)
T cd06647 234 EL--QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIA 275 (293)
T ss_pred CC--CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcC
Confidence 00 0111223356678889999999999999999999998653
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=302.67 Aligned_cols=252 Identities=26% Similarity=0.451 Sum_probs=199.2
Q ss_pred hcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
.++|...+.||+|+||.||+|..+++..||||.+.... ...++|.+|++++++++|+||+++++++.. ....
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~~~ 76 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSE-------EEPI 76 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeec-------CCce
Confidence 45678889999999999999998888899999987543 345789999999999999999999998754 3458
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
++||||+++|+|.+++.... ...+++.++..++.+++.|++|||+. +++|+||||+||+++.++.+|++|||++..
T Consensus 77 ~~v~e~~~~~~L~~~i~~~~-~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~ 152 (261)
T cd05034 77 YIVTEYMSKGSLLDFLKSGE-GKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARL 152 (261)
T ss_pred EEEEeccCCCCHHHHHhccc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECcccccee
Confidence 99999999999999997632 34689999999999999999999997 899999999999999999999999999865
Q ss_pred ccccccc--ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 636 AENAEKV--GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 636 ~~~~~~~--~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
....... .....+..|++||......++.++|||||||++|||+| |+.||...........+. .. ..
T Consensus 153 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~---~~----~~--- 222 (261)
T cd05034 153 IEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVE---RG----YR--- 222 (261)
T ss_pred ccchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH---cC----CC---
Confidence 4321111 11122346899999888889999999999999999999 999986644332222111 10 00
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
....... ...+.+++.+|++.+|++||+++|+.+.++
T Consensus 223 -~~~~~~~----~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~ 259 (261)
T cd05034 223 -MPRPPNC----PEELYDLMLQCWDKDPEERPTFEYLQSFLE 259 (261)
T ss_pred -CCCCCCC----CHHHHHHHHHHcccCcccCCCHHHHHHHHh
Confidence 0001111 235678889999999999999999997764
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-35 Score=303.79 Aligned_cols=237 Identities=22% Similarity=0.377 Sum_probs=184.3
Q ss_pred CccCCCCCceeEEEEecC-C----------cEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 483 AFMGEGSQGQMYRGRLKN-G----------TFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~~-g----------~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
+.||+|+||.||+|..++ + ..|++|.+...... ...|.+|+.++++++||||++++|+|..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~------- 72 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR------- 72 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-------
Confidence 468999999999999764 3 25788877654433 6789999999999999999999998864
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC-------c
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL-------V 624 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~-------~ 624 (786)
...++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++ .
T Consensus 73 -~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~ 146 (259)
T cd05037 73 -DENIMVEEYVKFGPLDVFLHREK--NNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPF 146 (259)
T ss_pred -CCcEEEEEcCCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCcee
Confidence 23689999999999999997632 2689999999999999999999987 999999999999999888 7
Q ss_pred ccccCCCcccccccccccccccccccccCccccccC--CCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHH
Q 003926 625 AKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARG--KLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVV 701 (786)
Q Consensus 625 ~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~--~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~ 701 (786)
+|++|||++...... ....+...|++||.+... .++.++|||||||++|||++ |..|+.............
T Consensus 147 ~kl~Dfg~a~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~--- 220 (259)
T cd05037 147 IKLSDPGIPITVLSR---EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQ--- 220 (259)
T ss_pred EEeCCCCcccccccc---cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHh---
Confidence 999999998654321 122344568999998766 68999999999999999999 467765443221111111
Q ss_pred HhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 003926 702 TADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNL 753 (786)
Q Consensus 702 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l 753 (786)
.. .....+. ...+.+++.+||..+|.+|||+.||++.+
T Consensus 221 -~~----~~~~~~~---------~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 221 -DQ----HRLPMPD---------CAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred -cC----CCCCCCC---------chHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 00 0000010 14677888999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-35 Score=309.00 Aligned_cols=265 Identities=18% Similarity=0.283 Sum_probs=195.2
Q ss_pred CCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC-CChHHHHHHHHHHhcCC-CCCcceeeeeeeeccccCCCCceE
Q 003926 479 FDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLR-HRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~-H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
|+..+.||+|+||.||+|... ++..||+|+++.... .......+|+.+++++. |+||+++++++.+. ..+..
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~-----~~~~~ 75 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDR-----KTGRL 75 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecC-----CCCcE
Confidence 456788999999999999854 689999999875432 22334568999999985 99999999998651 12568
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
++||||++ |+|.+++.... ..++|.++..++.|++.||+|||+. +++||||||+||+++. +.+||+|||++..
T Consensus 76 ~lv~e~~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~ 148 (282)
T cd07831 76 ALVFELMD-MNLYELIKGRK--RPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRG 148 (282)
T ss_pred EEEEecCC-ccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEecccccc
Confidence 99999997 58888887532 3689999999999999999999997 9999999999999999 9999999999865
Q ss_pred cccccccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccc--------
Q 003926 636 AENAEKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADES-------- 706 (786)
Q Consensus 636 ~~~~~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~-------- 706 (786)
...........++..|++||.... +.++.++|||||||++|||++|++||...+.................
T Consensus 149 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (282)
T cd07831 149 IYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRK 228 (282)
T ss_pred cccCCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcc
Confidence 543322223345677999997644 45788999999999999999999999765433222222211110000
Q ss_pred -cccccccccccc----cCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 707 -ARRSMVDPAVNK----ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 707 -~~~~~~d~~~~~----~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
.......+.... .........+.+++.+||+.+|++||+++|+++|.||
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 229 SRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred cccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 000000000000 0011234678899999999999999999999998764
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=302.72 Aligned_cols=251 Identities=21% Similarity=0.367 Sum_probs=197.5
Q ss_pred hcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
.++|+..+.||+|+||.||+|...++..+|+|.+.... ...+.|.+|++++++++|+||+++.+++.+ ...
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--------~~~ 75 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK--------EPI 75 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC--------CCe
Confidence 35677889999999999999998778889999887543 235679999999999999999999988653 347
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
+++|||+++|+|.+++.... ...+++..+..++.+++.||+|||+. +++||||||+||+++.++.+|++|||.+..
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~ 151 (260)
T cd05073 76 YIITEFMAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARV 151 (260)
T ss_pred EEEEEeCCCCcHHHHHHhCC-ccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceee
Confidence 99999999999999997632 34688999999999999999999987 999999999999999999999999999865
Q ss_pred ccccccc--ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 636 AENAEKV--GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 636 ~~~~~~~--~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
....... ....++..|++||....+.++.++|||||||++||++| |+.||...........+.. . ..
T Consensus 152 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~----~--~~---- 221 (260)
T cd05073 152 IEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER----G--YR---- 221 (260)
T ss_pred ccCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhC----C--CC----
Confidence 4322111 11223356899999988889999999999999999999 8999876543322222110 0 00
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
... .......+.+++.+||+.+|++||++.++.+.|.
T Consensus 222 -~~~----~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~ 258 (260)
T cd05073 222 -MPR----PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLD 258 (260)
T ss_pred -CCC----cccCCHHHHHHHHHHcccCcccCcCHHHHHHHHh
Confidence 000 1122345778889999999999999999998774
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-35 Score=313.98 Aligned_cols=263 Identities=18% Similarity=0.302 Sum_probs=205.1
Q ss_pred CCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC---ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH---STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~---~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
+|+..+.||+|+||.||+|+.. ++..||+|.+...... ..+.+.+|++++++++|+||+++++++.. ..
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------~~ 74 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQT-------ET 74 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeec-------CC
Confidence 5778899999999999999965 5899999999765432 34568999999999999999999998764 45
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++||||+++|+|.+++.... ...+++.....++.|+++||+|||.. +++||||||+||+++.++.++|+|||++
T Consensus 75 ~~~lv~e~~~~~~L~~~~~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~ 150 (316)
T cd05574 75 YLCLVMDYCPGGELFRLLQRQP-GKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLS 150 (316)
T ss_pred EEEEEEEecCCCCHHHHHHhCC-CCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchh
Confidence 6899999999999999987532 34689999999999999999999997 9999999999999999999999999997
Q ss_pred cccccccc------------------------------cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCC
Q 003926 634 LLAENAEK------------------------------VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRP 683 (786)
Q Consensus 634 ~~~~~~~~------------------------------~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~ 683 (786)
........ .....++..|++||......++.++||||||+++|||++|+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~ 230 (316)
T cd05574 151 KQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTT 230 (316)
T ss_pred hcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCC
Confidence 54321110 011235567999999888889999999999999999999999
Q ss_pred CCCCchhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCC----HHHHHHHHHHHHHh
Q 003926 684 LKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPS----VEDVLWNLQFAAQV 759 (786)
Q Consensus 684 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt----~~evl~~l~~~~~~ 759 (786)
||...+....... ..... ..... .......+.+++.+||+.||++||+ +.|++.|.||..
T Consensus 231 pf~~~~~~~~~~~---~~~~~---------~~~~~--~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~-- 294 (316)
T cd05574 231 PFKGSNRDETFSN---ILKKE---------VTFPG--SPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRG-- 294 (316)
T ss_pred CCCCCchHHHHHH---HhcCC---------ccCCC--ccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhc--
Confidence 9875443221111 11000 00000 0113346778888999999999999 999999999864
Q ss_pred hhhhccCCC
Q 003926 760 QDAWHSQSS 768 (786)
Q Consensus 760 ~~~~~~~~~ 768 (786)
..|.....
T Consensus 295 -~~~~~~~~ 302 (316)
T cd05574 295 -VNWALIRH 302 (316)
T ss_pred -CChhhccc
Confidence 34555554
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-35 Score=305.05 Aligned_cols=253 Identities=17% Similarity=0.256 Sum_probs=194.2
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC--C---ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC--H---STRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~---~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
++|...+.||+|+||.||+|+.. +|..||||.+..... . ..+.+.+|++++++++||||+++++++.+.
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----- 76 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDP----- 76 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccC-----
Confidence 46788899999999999999864 689999998864321 1 134688999999999999999999976531
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
.....++||||+++|+|.+++... ..+++.....++.|++.||+|||+. +++|+||||+||+++.++.+||+||
T Consensus 77 ~~~~~~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Df 150 (265)
T cd06652 77 MERTLSIFMEHMPGGSIKDQLKSY---GALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDF 150 (265)
T ss_pred CCceEEEEEEecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcC
Confidence 134578999999999999998753 2478888899999999999999997 8999999999999999999999999
Q ss_pred Ccccccccc----cccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccc
Q 003926 631 NLPLLAENA----EKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADES 706 (786)
Q Consensus 631 Gl~~~~~~~----~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (786)
|++...... .......++..|+|||......++.++|||||||++|||++|+.||........ +.......
T Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~---~~~~~~~~-- 225 (265)
T cd06652 151 GASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAA---IFKIATQP-- 225 (265)
T ss_pred ccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHH---HHHHhcCC--
Confidence 998644221 111223456679999998888899999999999999999999999865432211 11111000
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
..+. .+......+.+++.+|+. +|++||+++||++|.|+
T Consensus 226 -----~~~~----~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~ 264 (265)
T cd06652 226 -----TNPV----LPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFV 264 (265)
T ss_pred -----CCCC----CchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCccc
Confidence 0111 122333456677778885 99999999999988763
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-35 Score=311.55 Aligned_cols=256 Identities=20% Similarity=0.349 Sum_probs=195.9
Q ss_pred CCCccCccCCCCCceeEEEEec-----CCcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK-----NGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~-----~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
+|...+.||+|+||.||+|++. ++..||||.++..... ..+.|.+|++++++++|+||+++++++.. ..
T Consensus 5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~-----~~ 79 (284)
T cd05038 5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEK-----PG 79 (284)
T ss_pred hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeec-----CC
Confidence 4566788999999999999854 3689999999765443 35689999999999999999999998754 12
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
....++||||+++|+|.+++.... ..++|..+..++.|++.||+|||+. +++||||||+||+++.++.+|++|||
T Consensus 80 ~~~~~lv~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg 154 (284)
T cd05038 80 GRSLRLIMEYLPSGSLRDYLQRHR--DQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFG 154 (284)
T ss_pred CCceEEEEecCCCCCHHHHHHhCc--cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccc
Confidence 456899999999999999997642 2589999999999999999999997 99999999999999999999999999
Q ss_pred ccccccccccc----ccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHH-----------HH
Q 003926 632 LPLLAENAEKV----GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLK-----------NQ 696 (786)
Q Consensus 632 l~~~~~~~~~~----~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~-----------~~ 696 (786)
++......... ........|++||......++.++||||||+++|||+||+.|+......... ..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd05038 155 LAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTR 234 (284)
T ss_pred cccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHH
Confidence 98655422111 1112234588999988888999999999999999999999887543211100 00
Q ss_pred HHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 697 LQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 697 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
+....... . ....+......+.+++.+||+.+|++||||.||++++.
T Consensus 235 ~~~~~~~~---~--------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~ 281 (284)
T cd05038 235 LLELLKEG---E--------RLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVD 281 (284)
T ss_pred HHHHHHcC---C--------cCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHh
Confidence 00000000 0 00001112245778899999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=300.51 Aligned_cols=245 Identities=21% Similarity=0.417 Sum_probs=193.2
Q ss_pred CccCCCCCceeEEEEecCCcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEEEEec
Q 003926 483 AFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEY 561 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV~Ey 561 (786)
+.||+|+||.||+|...+++.||+|.+...... ..+.|.+|++++++++|+||+++++++.. ....++||||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------~~~~~~v~e~ 73 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQ-------KQPIYIVMEL 73 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEec-------CCCeEEEEEc
Confidence 468999999999999777999999998765443 45679999999999999999999998765 3568999999
Q ss_pred CCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccccccc
Q 003926 562 VPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEK 641 (786)
Q Consensus 562 ~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~~ 641 (786)
+++++|.+++.... ..+++.....++.+++.|++|||+. +++||||||+||+++.++.+||+|||++........
T Consensus 74 ~~~~~l~~~l~~~~--~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~ 148 (251)
T cd05041 74 VPGGSLLTFLRKKK--NRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIY 148 (251)
T ss_pred CCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcc
Confidence 99999999997532 3578999999999999999999997 999999999999999999999999999865432111
Q ss_pred c---ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccccccccccccc
Q 003926 642 V---GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVN 717 (786)
Q Consensus 642 ~---~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 717 (786)
. .....+..|++||....+.++.++|||||||++|||+| |..|+...........+.. .. .. .
T Consensus 149 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~----~~----~~---~-- 215 (251)
T cd05041 149 TVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIES----GY----RM---P-- 215 (251)
T ss_pred eeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhc----CC----CC---C--
Confidence 1 11112345899999888889999999999999999999 7888865443322222110 00 00 0
Q ss_pred ccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 718 KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 718 ~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
.+......+.+++.+||..+|++|||+.||++.+.
T Consensus 216 --~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 216 --APQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred --CCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 11122346778899999999999999999998774
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-35 Score=302.57 Aligned_cols=246 Identities=21% Similarity=0.425 Sum_probs=194.5
Q ss_pred cCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~ 556 (786)
++|...+.||+|+||.||+|.. +++.||+|.++... ..+.|.+|+.++++++||||+++++++.. +..+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--------~~~~ 74 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILH--------NGLY 74 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcC--------CCcE
Confidence 3567789999999999999975 57889999986432 35679999999999999999999998753 2369
Q ss_pred EEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccc
Q 003926 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636 (786)
Q Consensus 557 LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~ 636 (786)
+||||+++|+|.+++.... ...+++..++.++.|++.|+.|||+. +++||||||+||+++.++.+||+|||++...
T Consensus 75 ~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~ 150 (254)
T cd05083 75 IVMELMSKGNLVNFLRTRG-RALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVG 150 (254)
T ss_pred EEEECCCCCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceec
Confidence 9999999999999997542 34589999999999999999999987 9999999999999999999999999998644
Q ss_pred ccccccccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccccccccccc
Q 003926 637 ENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPA 715 (786)
Q Consensus 637 ~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 715 (786)
.... ........|++||....+.++.++|||||||++|||++ |++||...........+.. ... .++
T Consensus 151 ~~~~--~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~-------~~~--~~~- 218 (254)
T cd05083 151 SMGV--DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEK-------GYR--MEP- 218 (254)
T ss_pred cccC--CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhC-------CCC--CCC-
Confidence 3211 11222356899999888889999999999999999998 9999876554333222211 000 010
Q ss_pred ccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 716 VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 716 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
. ......+.+++.+||+.+|++||+++++++.+.
T Consensus 219 -~----~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 252 (254)
T cd05083 219 -P----EGCPADVYVLMTSCWETEPKKRPSFHKLREKLE 252 (254)
T ss_pred -C----CcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHc
Confidence 1 112245668889999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=304.26 Aligned_cols=254 Identities=18% Similarity=0.311 Sum_probs=195.7
Q ss_pred CCCccCccCCCCCceeEEEEecC--CcEEEEEEecccCC----------CChHHHHHHHHHHhc-CCCCCcceeeeeeee
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLKN--GTFVAIRCLKMKKC----------HSTRNFMHHIELISK-LRHRHLVSALGHCFE 544 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~~--g~~vAvK~l~~~~~----------~~~~~f~~E~~~l~~-l~H~NIv~l~g~~~~ 544 (786)
+|+..+.||+|+||.||+|..+. ++.+|+|.+..... ....++.+|+.++.+ ++||||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 46778899999999999999764 78999998864321 123457889988875 799999999998865
Q ss_pred ccccCCCCceEEEEEecCCCCChhHHhhcC-CCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC
Q 003926 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEG-HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL 623 (786)
Q Consensus 545 ~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~ 623 (786)
.+..++||||+++++|.+++... .....+++..++.++.|++.||.|||+. .+++||||||+||+++.++
T Consensus 81 -------~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~--~~i~H~dl~~~nil~~~~~ 151 (269)
T cd08528 81 -------NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKE--KRIVHRDLTPNNIMLGEDD 151 (269)
T ss_pred -------CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccC--CceeecCCCHHHEEECCCC
Confidence 45789999999999999988532 1234688999999999999999999963 2799999999999999999
Q ss_pred cccccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHh
Q 003926 624 VAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTA 703 (786)
Q Consensus 624 ~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~ 703 (786)
.+||+|||++.............++..|++||....+.++.++||||||+++|||++|++|+...........+. ..
T Consensus 152 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~---~~ 228 (269)
T cd08528 152 KVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIV---EA 228 (269)
T ss_pred cEEEecccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHh---hc
Confidence 999999999865544333333456677999999988889999999999999999999999987554332221111 00
Q ss_pred ccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 704 DESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 704 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
...+.. ... ....+.+++.+||+.||++||++.||..++.
T Consensus 229 ---~~~~~~----~~~----~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 229 ---VYEPLP----EGM----YSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred ---cCCcCC----ccc----CCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 011100 001 1235667888999999999999999998763
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-35 Score=305.86 Aligned_cols=256 Identities=20% Similarity=0.335 Sum_probs=201.7
Q ss_pred CCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
+|+..+.||+|+||.||+|..+ +++.||+|++..... ...+++.+|++++++++||||+++++++.. .+..
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-------~~~~ 74 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYN-------NGDI 74 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeec-------CCEE
Confidence 5677789999999999999975 689999999876543 234679999999999999999999998865 3578
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhc-CCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHT-GIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~-~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
++|+||+++++|.+++.... ..++......++.|+++|++|||+ . +++||||||+||++++++.+||+|||.+.
T Consensus 75 ~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~ 149 (265)
T cd06605 75 SICMEYMDGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSG 149 (265)
T ss_pred EEEEEecCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccch
Confidence 99999999999999997532 468889999999999999999999 6 99999999999999999999999999985
Q ss_pred ccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCch--hHHHHHHHHHHHHhccccccccc
Q 003926 635 LAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKE--VDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
........ ...++..|++||......++.++||||||+++|||++|+.|+.... .......++......
T Consensus 150 ~~~~~~~~-~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-------- 220 (265)
T cd06605 150 QLVNSLAK-TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEP-------- 220 (265)
T ss_pred hhHHHHhh-cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCC--------
Confidence 44322111 1445667999999888889999999999999999999999986542 111112222111110
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.+..... .....+.+++.+||..+|++|||+.|++.|+||.+
T Consensus 221 ~~~~~~~---~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~ 262 (265)
T cd06605 221 PPRLPSG---KFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKK 262 (265)
T ss_pred CCCCChh---hcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhc
Confidence 0111111 12345678888999999999999999999999853
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=304.71 Aligned_cols=253 Identities=19% Similarity=0.366 Sum_probs=198.1
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCc----EEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGT----FVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~----~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
.+|+..+.||+|+||.||+|..+ +|. .||+|.+...... ...++.+|++++++++||||++++|+|..
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 80 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS------ 80 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec------
Confidence 35667899999999999999864 333 6899988765432 34678999999999999999999998863
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
...++||||+++|+|.+++.... ..+++...+.++.|+++|++|||+. +++||||||+||+++.++.+||+||
T Consensus 81 --~~~~~v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~df 153 (279)
T cd05057 81 --SQVQLITQLMPLGCLLDYVRNHK--DNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDF 153 (279)
T ss_pred --CceEEEEecCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCC
Confidence 35799999999999999997642 3589999999999999999999997 9999999999999999999999999
Q ss_pred Ccccccccccccc---cccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccc
Q 003926 631 NLPLLAENAEKVG---HVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADES 706 (786)
Q Consensus 631 Gl~~~~~~~~~~~---~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (786)
|+++......... ....+..|++||......++.++||||||+++||+++ |++|+.......+...+.. .
T Consensus 154 g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~----~-- 227 (279)
T cd05057 154 GLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEK----G-- 227 (279)
T ss_pred cccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhC----C--
Confidence 9986553222111 1112346899999888889999999999999999999 9999977654443332221 0
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.....+. .+. ..+.+++.+||..+|++||++.++++.+....
T Consensus 228 --~~~~~~~---~~~----~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~ 269 (279)
T cd05057 228 --ERLPQPP---ICT----IDVYMVLVKCWMIDAESRPTFKELINEFSKMA 269 (279)
T ss_pred --CCCCCCC---CCC----HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 0001111 111 34667888999999999999999999887543
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-35 Score=308.96 Aligned_cols=267 Identities=21% Similarity=0.254 Sum_probs=201.7
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
++|+..+.||.|++|.||+|..+ +++.||+|.+..... ....++.+|++++++++||||++++++|... ....
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 75 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDE-----SSSS 75 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEcc-----CCCe
Confidence 35777899999999999999964 689999999875433 2346799999999999999999999988641 2346
Q ss_pred EEEEEecCCCCChhHHhhcCC-CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 555 IFLIFEYVPNGTLRSWISEGH-AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
.++||||+++|+|.+++.... ....+++.....++.|++.||.|||+. +++|+||+|+||+++.++.+||+|||++
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~ 152 (287)
T cd06621 76 IGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVS 152 (287)
T ss_pred EEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeecccc
Confidence 899999999999999876321 234588889999999999999999997 9999999999999999999999999997
Q ss_pred cccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchh--HHHHHHHHHHHHhcccccccc
Q 003926 634 LLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEV--DLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 711 (786)
........ ....++..|++||......++.++||||+||++|||++|+.|+..... ....+......... ...+
T Consensus 153 ~~~~~~~~-~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~ 228 (287)
T cd06621 153 GELVNSLA-GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMP---NPEL 228 (287)
T ss_pred cccccccc-ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCC---chhh
Confidence 54322111 123345678999998888899999999999999999999999875421 11111111111100 0001
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
.+ .... .......+.+++.+||+.+|++|||+.||++|.|+...
T Consensus 229 ~~-~~~~--~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~ 272 (287)
T cd06621 229 KD-EPGN--GIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQ 272 (287)
T ss_pred cc-CCCC--CCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcccccc
Confidence 00 0000 01123456788899999999999999999999998553
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-35 Score=308.95 Aligned_cols=251 Identities=19% Similarity=0.298 Sum_probs=201.5
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|...+.||+|+||.||++... +++.||+|.+..... ...+.+.+|++++++++||||+++++++.. .
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~ 73 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQD-------D 73 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEc-------C
Confidence 36778899999999999999965 689999999875432 234668999999999999999999998764 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..++||||+++|+|.+++... ..+++..+..++.|++.||.|||+. +++||||+|+||+++.++.+||+|||+
T Consensus 74 ~~~~~v~e~~~~~~L~~~~~~~---~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~ 147 (290)
T cd05580 74 SNLYLVMEYVPGGELFSHLRKS---GRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGF 147 (290)
T ss_pred CeEEEEEecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCC
Confidence 5689999999999999999763 3688999999999999999999997 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
+...... .....++..|++||......++.++||||||+++|||++|+.|+...+.......+. . ..
T Consensus 148 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~---~-~~------- 214 (290)
T cd05580 148 AKRVKGR--TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKIL---E-GK------- 214 (290)
T ss_pred ccccCCC--CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh---c-CC-------
Confidence 8655332 223345678999999887788999999999999999999999987654322221111 0 00
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERP-----SVEDVLWNLQFAAQ 758 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~~l~~~~~ 758 (786)
..++... ...+.+++.+||+.||.+|| +++|+++|+|+...
T Consensus 215 -~~~~~~~----~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 260 (290)
T cd05580 215 -VRFPSFF----SPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGI 260 (290)
T ss_pred -ccCCccC----CHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccC
Confidence 0111111 23556788899999999999 89999999997653
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-35 Score=308.85 Aligned_cols=265 Identities=19% Similarity=0.306 Sum_probs=199.7
Q ss_pred CCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
+|+..+.||+|+||.||+|+.. +|..||||++..... ...+.+.+|+.++++++||||+++++++.. ...
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-------~~~ 73 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPH-------GSG 73 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEec-------CCe
Confidence 3677889999999999999964 689999999876542 234679999999999999999999998764 456
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++||||+ +++|.+++.... ..+++.++..++.|+++||+|||+. +++|+||||+||+++.++.++++|||++.
T Consensus 74 ~~~v~e~~-~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~ 147 (286)
T cd07832 74 FVLVMEYM-PSDLSEVLRDEE--RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLAR 147 (286)
T ss_pred eEEEeccc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecc
Confidence 89999999 999999987532 4689999999999999999999997 99999999999999999999999999986
Q ss_pred cccccc--ccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHH-hcccccc-
Q 003926 635 LAENAE--KVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVT-ADESARR- 709 (786)
Q Consensus 635 ~~~~~~--~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~-~~~~~~~- 709 (786)
...... ......++..|+|||..... .++.++||||+|+++|||+||++++...........+..... .....+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (286)
T cd07832 148 LFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPG 227 (286)
T ss_pred cccCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhh
Confidence 553322 12234466789999987544 468999999999999999999888865433222111111110 0000000
Q ss_pred --------ccccccc----cccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 710 --------SMVDPAV----NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 710 --------~~~d~~~----~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
.+..+.. ......+....+.+++.+|++.+|.+||++++++.|+||
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~ 285 (286)
T cd07832 228 LTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYF 285 (286)
T ss_pred ccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCc
Confidence 0000000 000011223567889999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-35 Score=305.92 Aligned_cols=254 Identities=22% Similarity=0.389 Sum_probs=195.4
Q ss_pred cCCCccCccCCCCCceeEEEEec------CCcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFDD 549 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~ 549 (786)
++|+....||+|+||.||+|+.+ +...||+|.+...... ..++|.+|++++++++|+||+++++++..
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----- 79 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCRE----- 79 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECC-----
Confidence 46778899999999999999864 3468999988755433 34679999999999999999999998764
Q ss_pred CCCceEEEEEecCCCCChhHHhhcCCCC------CCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC
Q 003926 550 SSVSRIFLIFEYVPNGTLRSWISEGHAH------QSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL 623 (786)
Q Consensus 550 ~~~~~~~LV~Ey~~~GsL~~~l~~~~~~------~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~ 623 (786)
.+..++||||+++|+|.+++...... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 80 --~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~ 154 (275)
T cd05046 80 --AEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQR 154 (275)
T ss_pred --CCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCC
Confidence 34579999999999999999754321 2589999999999999999999987 999999999999999999
Q ss_pred cccccCCCccccccccc--ccccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHH
Q 003926 624 VAKISSYNLPLLAENAE--KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAV 700 (786)
Q Consensus 624 ~~kl~DfGl~~~~~~~~--~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~ 700 (786)
.+|++|||++....... ......++..|++||......++.++|||||||++|||++ |..||.............
T Consensus 155 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~-- 232 (275)
T cd05046 155 EVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQ-- 232 (275)
T ss_pred cEEEcccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHH--
Confidence 99999999975432111 1112233456899999887888999999999999999999 778886533322211111
Q ss_pred HHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 701 VTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 701 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
.. ... ... .. .....+.+++.+||+.+|++||++.|++.++.
T Consensus 233 --~~--~~~-~~~---~~----~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 233 --AG--KLE-LPV---PE----GCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred --cC--CcC-CCC---CC----CCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 00 000 000 11 11235678888999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=305.48 Aligned_cols=257 Identities=20% Similarity=0.384 Sum_probs=204.7
Q ss_pred HhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
.++.|+..+.||+|+||.||+|..+ ++..||+|+++.... ..+.+.+|++++++++|+||+++++++.. .+
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------~~ 88 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLV-------GD 88 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEE-------CC
Confidence 4566778899999999999999976 688999999976543 46679999999999999999999998875 35
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++|+||+++++|.+++.... ..+++..+..++.+++.||+|||+. +++|+||+|+||+++.++.+||+|||++
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~ 163 (286)
T cd06614 89 ELWVVMEYMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFA 163 (286)
T ss_pred EEEEEEeccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchh
Confidence 6899999999999999998642 3689999999999999999999997 9999999999999999999999999997
Q ss_pred ccccccc-ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 634 LLAENAE-KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 634 ~~~~~~~-~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
....... ......++..|++||......++.++|||||||++|||++|+.|+...........+. .. ......
T Consensus 164 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~---~~---~~~~~~ 237 (286)
T cd06614 164 AQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLIT---TK---GIPPLK 237 (286)
T ss_pred hhhccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---hc---CCCCCc
Confidence 5433221 1122234567899999888889999999999999999999999987544322211110 00 001111
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
++ ......+.+++.+||+.+|.+||++.||+.+.++.+
T Consensus 238 ~~-------~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 275 (286)
T cd06614 238 NP-------EKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKK 275 (286)
T ss_pred ch-------hhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhc
Confidence 11 112235678888999999999999999999999886
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=304.88 Aligned_cols=251 Identities=19% Similarity=0.347 Sum_probs=199.1
Q ss_pred CCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEE
Q 003926 479 FDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~ 556 (786)
|+..+.||+|+||.||+|... ++..||||.+..... ...+.|.+|++++++++||||+++++++.. .+..+
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-------~~~~~ 78 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK-------DTKLW 78 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEe-------CCeEE
Confidence 566788999999999999854 689999998865432 234678999999999999999999998875 45689
Q ss_pred EEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccc
Q 003926 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636 (786)
Q Consensus 557 LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~ 636 (786)
+||||+++|+|.+++.. ..+++.....++.+++.|+.|||+. +++|+||||+||+++.++.++++|||++...
T Consensus 79 lv~e~~~~~~l~~~i~~----~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~ 151 (277)
T cd06641 79 IIMEYLGGGSALDLLEP----GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQL 151 (277)
T ss_pred EEEEeCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceec
Confidence 99999999999999864 2588999999999999999999997 9999999999999999999999999998544
Q ss_pred cccc-ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccccccc
Q 003926 637 ENAE-KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPA 715 (786)
Q Consensus 637 ~~~~-~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 715 (786)
.... ......++..|++||......++.++|||||||++|||++|+.|+...........+. .. .. +.
T Consensus 152 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~----~~---~~----~~ 220 (277)
T cd06641 152 TDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIP----KN---NP----PT 220 (277)
T ss_pred ccchhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHh----cC---CC----CC
Confidence 3221 1112345667899999888888999999999999999999999986543322211110 00 00 11
Q ss_pred ccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 716 VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 716 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
+. ......+.+++.+||+.+|++||++.|+++|.++.+.
T Consensus 221 ~~----~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~ 259 (277)
T cd06641 221 LE----GNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRF 259 (277)
T ss_pred CC----cccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhh
Confidence 11 1122356678889999999999999999999998764
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-35 Score=306.51 Aligned_cols=253 Identities=20% Similarity=0.335 Sum_probs=193.4
Q ss_pred CCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC---C-------ChHHHHHHHHHHhcCCCCCcceeeeeeeeccc
Q 003926 479 FDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---H-------STRNFMHHIELISKLRHRHLVSALGHCFECYF 547 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~-------~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~ 547 (786)
|...+.||+|+||.||+|... +|+.||||.++.... . ..+.+.+|++++++++|+||+++++++..
T Consensus 3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--- 79 (272)
T cd06629 3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETT--- 79 (272)
T ss_pred eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEecc---
Confidence 556789999999999999854 689999998864321 1 12467889999999999999999998764
Q ss_pred cCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccc
Q 003926 548 DDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKI 627 (786)
Q Consensus 548 ~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl 627 (786)
.+..++||||+++|+|.+++.+. ..+++..+..++.|++.||.|||+. +++||||+|+||+++.++.+|+
T Consensus 80 ----~~~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l 149 (272)
T cd06629 80 ----EEYLSIFLEYVPGGSIGSCLRTY---GRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKI 149 (272)
T ss_pred ----CCceEEEEecCCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEE
Confidence 35689999999999999999764 3688999999999999999999997 9999999999999999999999
Q ss_pred cCCCcccccccccc---cccccccccccCccccccCC--CCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHH
Q 003926 628 SSYNLPLLAENAEK---VGHVIPYSGSIDPTNSARGK--LEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVT 702 (786)
Q Consensus 628 ~DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~--~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~ 702 (786)
+|||++........ .....++..|++||...... ++.++||||||+++||+++|+.|+...+.... ....
T Consensus 150 ~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~--~~~~--- 224 (272)
T cd06629 150 SDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAA--MFKL--- 224 (272)
T ss_pred eeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHH--HHHh---
Confidence 99999865432111 11233556789999876544 88999999999999999999999864432111 1110
Q ss_pred hccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 703 ADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 703 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
........+++... ......+.+++.+||+.+|++||++.||++|+|
T Consensus 225 -~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~ 271 (272)
T cd06629 225 -GNKRSAPPIPPDVS----MNLSPVALDFLNACFTINPDNRPTARELLQHPF 271 (272)
T ss_pred -hccccCCcCCcccc----ccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCC
Confidence 00001111111111 122346678888999999999999999999876
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=309.03 Aligned_cols=251 Identities=19% Similarity=0.324 Sum_probs=196.2
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC---ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH---STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~---~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
..|+..+.||+|+||.||+|... +|+.||+|++...... ..+++.+|++++++++||||+++.|+|.. .
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~-------~ 87 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLR-------E 87 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEe-------C
Confidence 44777889999999999999864 6899999998644332 23568899999999999999999999875 3
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..++||||++ |++.+++.... ..+++..+..++.|++.||.|||+. +|+||||+|+||++++++.+||+|||+
T Consensus 88 ~~~~lv~e~~~-g~l~~~~~~~~--~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~ 161 (307)
T cd06607 88 HTAWLVMEYCL-GSASDILEVHK--KPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGS 161 (307)
T ss_pred CeEEEEHHhhC-CCHHHHHHHcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCc
Confidence 56899999997 67877775422 3589999999999999999999987 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCccccc---cCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSA---RGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~---~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
+....... ...++..|+|||.+. .+.++.++|||||||++|||+||++|+...+.......+. .. .
T Consensus 162 ~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~----~~--~-- 230 (307)
T cd06607 162 ASLVSPAN---SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA----QN--D-- 230 (307)
T ss_pred ceecCCCC---CccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHh----cC--C--
Confidence 86543222 234556789999863 4568899999999999999999999986544322111110 00 0
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.+... .......+.+++.+||+.+|++||++.+|+.|+|+..
T Consensus 231 ---~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 272 (307)
T cd06607 231 ---SPTLS---SNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLR 272 (307)
T ss_pred ---CCCCC---chhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcc
Confidence 01111 1122345778888999999999999999999998765
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-35 Score=305.22 Aligned_cols=247 Identities=21% Similarity=0.417 Sum_probs=190.3
Q ss_pred CccCCCCCceeEEEEecC-------CcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 483 AFMGEGSQGQMYRGRLKN-------GTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~~-------g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
+.||+|+||.||+|+..+ +..||||.+..... ....+|.+|++++++++||||++++++|.. .+.
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~~ 73 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLL-------NEP 73 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecC-------CCC
Confidence 368999999999998642 25799998865432 345679999999999999999999998864 345
Q ss_pred EEEEEecCCCCChhHHhhcCC----CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC-----cc
Q 003926 555 IFLIFEYVPNGTLRSWISEGH----AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL-----VA 625 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~----~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~-----~~ 625 (786)
.++||||+++|+|.+++.... ....++|.+++.++.|++.||+|||+. +++|+||||+||+++.+. .+
T Consensus 74 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~ 150 (269)
T cd05044 74 QYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVV 150 (269)
T ss_pred eEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcce
Confidence 899999999999999997531 123478999999999999999999987 899999999999999877 89
Q ss_pred cccCCCcccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHH
Q 003926 626 KISSYNLPLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVV 701 (786)
Q Consensus 626 kl~DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~ 701 (786)
|++|||++........ ......+..|++||....+.++.++|||||||++|||+| |+.|+...........+.
T Consensus 151 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~--- 227 (269)
T cd05044 151 KIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVT--- 227 (269)
T ss_pred EECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHh---
Confidence 9999999854422111 112223457899999988889999999999999999998 999986543322221111
Q ss_pred HhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 702 TADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 702 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
.. . .. . .+......+.+++.+||+.+|++||++.+|++.+.
T Consensus 228 -~~--~--~~---~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 228 -AG--G--RL---Q----KPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred -cC--C--cc---C----CcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 00 0 00 0 01122345678889999999999999999998874
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=315.29 Aligned_cols=271 Identities=17% Similarity=0.208 Sum_probs=200.5
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC--CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK--CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.+.|+..+.||+|+||.||+|+.. +|+.||||++.... ......+.+|++++++++|+||+++++++..... ....
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~~ 93 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKS-LEEF 93 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCC-cccc
Confidence 467888999999999999999954 78999999986432 2234568899999999999999999998753211 0112
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
...|+||||++ |+|.+.+.. .+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~-----~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg~ 164 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQM-----DLDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 164 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCcc
Confidence 45799999996 588888764 278888999999999999999997 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcc-------
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADE------- 705 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~------- 705 (786)
+.............++..|+|||......++.++|||||||++|||++|+.||...+.......+........
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (353)
T cd07850 165 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRL 244 (353)
T ss_pred ceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHh
Confidence 8655433222233456779999999888899999999999999999999999875432211111100000000
Q ss_pred -----------cc-----ccccccc----cccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 706 -----------SA-----RRSMVDP----AVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 706 -----------~~-----~~~~~d~----~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
.. ....... .............+.+++.+||+.||++|||+.|++.|.|+.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~ 315 (353)
T cd07850 245 QPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYIN 315 (353)
T ss_pred hhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHh
Confidence 00 0000000 000000112344567899999999999999999999999976
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-35 Score=309.79 Aligned_cols=266 Identities=18% Similarity=0.321 Sum_probs=194.8
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
++|+..+.||+|+||.||+|+.+ +++.||||.+...... ....+.+|++++++++|+||+++++++.. .+.
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------~~~ 77 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHT-------KKT 77 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEec-------CCe
Confidence 56788899999999999999965 6899999998754322 23567899999999999999999998764 457
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++||||+++ +|.+++.... ..+++.....++.|+++||.|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 78 ~~lv~e~~~~-~L~~~~~~~~--~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~ 151 (291)
T cd07844 78 LTLVFEYLDT-DLKQYMDDCG--GGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLAR 151 (291)
T ss_pred EEEEEecCCC-CHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECcccccc
Confidence 8999999984 9999987532 3688999999999999999999997 99999999999999999999999999975
Q ss_pred ccccc-cccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCch-h-HHHHHHHHHHHHhccccccc
Q 003926 635 LAENA-EKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKE-V-DLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 635 ~~~~~-~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~-~-~~~~~~~~~~~~~~~~~~~~ 710 (786)
..... .......++..|+|||.... ..++.++|||||||++|||++|++||.... . +.+.................
T Consensus 152 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (291)
T cd07844 152 AKSVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPG 231 (291)
T ss_pred ccCCCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhh
Confidence 43211 11112234567899998754 458899999999999999999999986543 1 11111111100000000000
Q ss_pred c-------------c-cccccccCc-HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 711 M-------------V-DPAVNKACL-DESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 711 ~-------------~-d~~~~~~~~-~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
. . ...+..... ......+.+++.+|++.+|++|||+.|++.+.||
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 232 VSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred hhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 0 0 000000000 0011456788899999999999999999988764
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=311.04 Aligned_cols=264 Identities=18% Similarity=0.275 Sum_probs=192.8
Q ss_pred CCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 479 FDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
|+..+.||+|+||.||+|+.. +|+.||+|+++.... .....+.+|++++++++|+||+++++++.. ....
T Consensus 2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~-------~~~~ 74 (284)
T cd07839 2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHS-------DKKL 74 (284)
T ss_pred ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhcc-------CCce
Confidence 667789999999999999964 689999999875432 223568899999999999999999998754 4568
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
++|+||++ |+|.+++.... ..+++.....++.|+++||.|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 75 ~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~ 148 (284)
T cd07839 75 TLVFEYCD-QDLKKYFDSCN--GDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARA 148 (284)
T ss_pred EEEEecCC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhc
Confidence 99999997 58888876432 3589999999999999999999997 999999999999999999999999999864
Q ss_pred cccc-cccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCC-CCchhHHHHHHHHHHHHh-ccccc---
Q 003926 636 AENA-EKVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLK-SRKEVDLLKNQLQAVVTA-DESAR--- 708 (786)
Q Consensus 636 ~~~~-~~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~-~~~~~~~~~~~~~~~~~~-~~~~~--- 708 (786)
.... .......++..|+|||.+.+. .++.++|||||||++|||+||+.|+ ...+.......+...... ....+
T Consensus 149 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (284)
T cd07839 149 FGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGV 228 (284)
T ss_pred cCCCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHh
Confidence 4322 112223445679999987654 4789999999999999999998775 333222211111111100 00000
Q ss_pred ccccc----ccccc-----cCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 709 RSMVD----PAVNK-----ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 709 ~~~~d----~~~~~-----~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
....+ +.... .........+.+++.+||+.||.+|||+.|+++|+||
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 229 SKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred hhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 00000 00000 0011123466788999999999999999999998774
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=301.17 Aligned_cols=257 Identities=19% Similarity=0.343 Sum_probs=203.7
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
++|+..+.||+|++|.||+|+.+ +++.||||++..... ...+.|.+|++.+++++|+||+++++++.. ...
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------~~~ 73 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYK-------EGE 73 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcc-------CCe
Confidence 36788899999999999999966 599999999876543 345789999999999999999999998865 356
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhc-CCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHT-GIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~-~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
.++||||+++++|.+++... ..+++..+..++.|+++|++|||+ . +++||||+|+||+++.++.++++|||++
T Consensus 74 ~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~ 147 (264)
T cd06623 74 ISIVLEYMDGGSLADLLKKV---GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGIS 147 (264)
T ss_pred EEEEEEecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccc
Confidence 89999999999999999753 468999999999999999999999 7 9999999999999999999999999998
Q ss_pred ccccccccc-ccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 634 LLAENAEKV-GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 634 ~~~~~~~~~-~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
......... ....++..|++||......++.++||||||+++|||+||+.|+.................. .
T Consensus 148 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~--------~ 219 (264)
T cd06623 148 KVLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDG--------P 219 (264)
T ss_pred eecccCCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcC--------C
Confidence 654332221 1334566789999988888999999999999999999999998655311111111111110 0
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.+..... .....+.+++.+||..+|++||++.|++++.|+..
T Consensus 220 ~~~~~~~---~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~ 261 (264)
T cd06623 220 PPSLPAE---EFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKK 261 (264)
T ss_pred CCCCCcc---cCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHh
Confidence 1111111 02345677888999999999999999999998753
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=310.68 Aligned_cols=271 Identities=20% Similarity=0.283 Sum_probs=200.4
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.++|+..+.||+|+||.||+|..+ +|+.||+|+++..... ....+.+|++++++++|+||+++++++.. ...
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~ 80 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVG-----KHL 80 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEec-----CCC
Confidence 467888999999999999999964 6999999998754322 23457789999999999999999998754 123
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..++||||++ ++|.+++.... ..+++.++..++.|+++|++|||+. +++||||||+||+++.++.+||+|||+
T Consensus 81 ~~~~lv~e~~~-~~l~~~l~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~ 154 (309)
T cd07845 81 DSIFLVMEYCE-QDLASLLDNMP--TPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGL 154 (309)
T ss_pred CeEEEEEecCC-CCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccce
Confidence 45899999997 48988887532 4689999999999999999999998 999999999999999999999999999
Q ss_pred cccccccc-ccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc-
Q 003926 633 PLLAENAE-KVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR- 709 (786)
Q Consensus 633 ~~~~~~~~-~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~- 709 (786)
+....... .......+..|+|||...+ ..++.++|||||||++|||++|++||...........+............
T Consensus 155 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (309)
T cd07845 155 ARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWP 234 (309)
T ss_pred eeecCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhch
Confidence 86543321 1122233566899998754 45789999999999999999999999765443322222221111000000
Q ss_pred cc----------ccccccc---cCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 710 SM----------VDPAVNK---ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 710 ~~----------~d~~~~~---~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.. ....... .........+.+++.+|++.||++|||+.|++.|.||.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~ 295 (309)
T cd07845 235 GFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKE 295 (309)
T ss_pred hhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcc
Confidence 00 0000000 000112345678899999999999999999999999863
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=303.62 Aligned_cols=250 Identities=20% Similarity=0.286 Sum_probs=194.4
Q ss_pred cCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEEEEe
Q 003926 485 MGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFE 560 (786)
Q Consensus 485 iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV~E 560 (786)
||+|+||+||+|..+ +|+.||+|.+..... ...+.|.+|++++++++||||+++++++.. .+..|+|||
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------~~~~~lv~e 73 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFET-------KDDLCLVMT 73 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEec-------CCeEEEEEe
Confidence 699999999999854 689999999875432 234567899999999999999999988754 456899999
Q ss_pred cCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccccccc
Q 003926 561 YVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE 640 (786)
Q Consensus 561 y~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~ 640 (786)
|+++|+|.+++.... ...+++..+..++.|+++|+.|||+. +++||||+|+||++++++.+|++|||++.......
T Consensus 74 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 149 (277)
T cd05577 74 LMNGGDLKYHIYNVG-EPGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK 149 (277)
T ss_pred cCCCCcHHHHHHHcC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccCC
Confidence 999999999997543 24689999999999999999999997 99999999999999999999999999986543322
Q ss_pred ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccccccC
Q 003926 641 KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKAC 720 (786)
Q Consensus 641 ~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 720 (786)
......+...|++||......++.++|||||||++|||++|+.||...........+....... .....
T Consensus 150 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--------~~~~~--- 218 (277)
T cd05577 150 KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEM--------AVEYP--- 218 (277)
T ss_pred ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccc--------cccCC---
Confidence 2223345567899999888889999999999999999999999986543211111111100000 00111
Q ss_pred cHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHHHHHHH
Q 003926 721 LDESLKTMMEVCVRCLLKNPAERP-----SVEDVLWNLQFAA 757 (786)
Q Consensus 721 ~~~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~~l~~~~ 757 (786)
......+.+++.+||+.+|++|| ++.+++.|+|+..
T Consensus 219 -~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~ 259 (277)
T cd05577 219 -DKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKD 259 (277)
T ss_pred -ccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhc
Confidence 11123566788899999999999 8888999999875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=304.59 Aligned_cols=253 Identities=21% Similarity=0.385 Sum_probs=198.8
Q ss_pred CCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCC-CChHHHHHHHHHHhcCC---CCCcceeeeeeeeccccCCCC
Q 003926 478 NFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC-HSTRNFMHHIELISKLR---HRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~---H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.|+..+.||+|+||.||+|.. .++..||||.++.... ....++.+|++++++++ |||++++++++.. .
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~-------~ 74 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLK-------G 74 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeee-------C
Confidence 466778999999999999996 5789999999875432 33567889999999997 9999999998864 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
...++||||+++++|.+++... .+++.....++.+++.||.|||+. +|+||||+|+||++++++.++++|||+
T Consensus 75 ~~~~lv~e~~~~~~L~~~~~~~----~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~ 147 (277)
T cd06917 75 PRLWIIMEYAEGGSVRTLMKAG----PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGV 147 (277)
T ss_pred CEEEEEEecCCCCcHHHHHHcc----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCc
Confidence 5689999999999999998652 589999999999999999999997 999999999999999999999999999
Q ss_pred cccccccc-ccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 633 PLLAENAE-KVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 633 ~~~~~~~~-~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
+....... ......++..|+|||....+ .++.++|||||||++|||++|++|+...........+ . .
T Consensus 148 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~------~-----~ 216 (277)
T cd06917 148 AALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLI------P-----K 216 (277)
T ss_pred eeecCCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhcc------c-----c
Confidence 86543322 12223456678999987654 4689999999999999999999999754332111100 0 0
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
...+.+... .....+.+++.+||+.||++||++.|++++.|+.+.
T Consensus 217 ~~~~~~~~~---~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~ 261 (277)
T cd06917 217 SKPPRLEDN---GYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAH 261 (277)
T ss_pred CCCCCCCcc---cCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhcc
Confidence 011111111 123457788889999999999999999999998653
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-35 Score=304.43 Aligned_cols=251 Identities=16% Similarity=0.261 Sum_probs=209.2
Q ss_pred CCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCC--hHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 478 NFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHS--TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~--~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
-|+..+.||+|.|++|-.|++ =+|+.||||++++.+... ....++|++.|+-++|||||++|.+... ...
T Consensus 19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDT-------QTK 91 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDT-------QTK 91 (864)
T ss_pred eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcc-------cce
Confidence 356678899999999999984 479999999998776543 4568899999999999999999987532 567
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceee-cCCCcccccCCCcc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL-DQNLVAKISSYNLP 633 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILl-d~~~~~kl~DfGl~ 633 (786)
+|||+|.-.+|+|++||-+.. ..+......+++.||.+|+.|+|.- ++|||||||+||.+ ..-|-+|++|||++
T Consensus 92 lyLiLELGD~GDl~DyImKHe--~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFS 166 (864)
T KOG4717|consen 92 LYLILELGDGGDLFDYIMKHE--EGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFS 166 (864)
T ss_pred EEEEEEecCCchHHHHHHhhh--ccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeecccc
Confidence 999999999999999997643 3578888889999999999999997 99999999999875 45688999999999
Q ss_pred cccccccccccccccccccCccccccCCCCc-ccceeehhHHHHHHHhCCCCCCCchhHH-HHHHHHHHHHhcccccccc
Q 003926 634 LLAENAEKVGHVIPYSGSIDPTNSARGKLEE-KIDIYDFGLILLEIIVGRPLKSRKEVDL-LKNQLQAVVTADESARRSM 711 (786)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~-ksDVwSfGvvl~ElltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 711 (786)
.....+....+.+|...|-|||++.+..|+. ++||||+|||||-|++|++||+..+..+ +..++..
T Consensus 167 Nkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDC------------ 234 (864)
T KOG4717|consen 167 NKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDC------------ 234 (864)
T ss_pred ccCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcc------------
Confidence 7777777888889999999999999988874 7899999999999999999998654432 2222211
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
....+.....+..+++..+++.||++|.+.+||+.+.|...
T Consensus 235 -----KYtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~ 275 (864)
T KOG4717|consen 235 -----KYTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQA 275 (864)
T ss_pred -----cccCchhhhHHHHHHHHHHHhcCchhhccHHHHhccccccC
Confidence 11234555667889999999999999999999999988553
|
|
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-34 Score=300.58 Aligned_cols=249 Identities=18% Similarity=0.316 Sum_probs=181.3
Q ss_pred ccCCCCCceeEEEEecCC---cEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEEEE
Q 003926 484 FMGEGSQGQMYRGRLKNG---TFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIF 559 (786)
Q Consensus 484 ~iG~G~fg~Vy~~~~~~g---~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV~ 559 (786)
.||+|+||.||+|...++ ..+++|.++.... ...+.|.+|+.+++.++||||++++++|.. ....++||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~-------~~~~~lv~ 74 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVE-------AIPYLLVF 74 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecC-------CCccEEEE
Confidence 589999999999985433 3566776654432 235679999999999999999999999875 34589999
Q ss_pred ecCCCCChhHHhhcCCC-CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccccc
Q 003926 560 EYVPNGTLRSWISEGHA-HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAEN 638 (786)
Q Consensus 560 Ey~~~GsL~~~l~~~~~-~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~ 638 (786)
||+++|+|.+++++... ....++.....++.|+++||+|||+. +++||||||+|||++.++.+||+|||++.....
T Consensus 75 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~ 151 (268)
T cd05086 75 EYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYK 151 (268)
T ss_pred ecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCc
Confidence 99999999999975322 23466777888999999999999987 899999999999999999999999999753211
Q ss_pred cc---ccccccccccccCcccccc-------CCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccc
Q 003926 639 AE---KVGHVIPYSGSIDPTNSAR-------GKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESA 707 (786)
Q Consensus 639 ~~---~~~~~~~~~~~~aPe~~~~-------~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (786)
.. ......++..|++||.... ..++.++|||||||++|||++ |.+|+........... .... .
T Consensus 152 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~---~~~~---~ 225 (268)
T cd05086 152 EDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNH---VIKD---Q 225 (268)
T ss_pred chhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHH---HHhh---c
Confidence 11 1112334567899998642 245789999999999999997 5677765433221111 1111 1
Q ss_pred ccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 003926 708 RRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNL 753 (786)
Q Consensus 708 ~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l 753 (786)
.....++.+..... ..+.+++..|| .+|++||+++||++.|
T Consensus 226 ~~~~~~~~~~~~~~----~~~~~l~~~c~-~~P~~Rp~~~~i~~~l 266 (268)
T cd05086 226 QVKLFKPQLELPYS----ERWYEVLQFCW-LSPEKRATAEEVHRLL 266 (268)
T ss_pred ccccCCCccCCCCc----HHHHHHHHHHh-hCcccCCCHHHHHHHh
Confidence 12223333322222 23456677899 5799999999999876
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=303.95 Aligned_cols=254 Identities=18% Similarity=0.346 Sum_probs=197.5
Q ss_pred CCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCC------ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 478 NFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCH------STRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~------~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
+|+..+.||+|+||.||+|.. .+++.||+|.+...... ..+.+.+|++++++++|+||+++++++.+
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------ 74 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCE------ 74 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceecc------
Confidence 477789999999999999984 57899999998754321 23578999999999999999999999865
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC-cccccC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL-VAKISS 629 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~-~~kl~D 629 (786)
.+..++||||+++|+|.+++.+. ..+++.....++.|++.||+|||+. +++||||||+||+++.++ .+||+|
T Consensus 75 -~~~~~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~d 147 (268)
T cd06630 75 -DSHFNLFVEWMAGGSVSHLLSKY---GAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIAD 147 (268)
T ss_pred -CCeEEEEEeccCCCcHHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEcc
Confidence 45689999999999999999753 3588999999999999999999997 999999999999998775 589999
Q ss_pred CCcccccccccc-----cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhc
Q 003926 630 YNLPLLAENAEK-----VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704 (786)
Q Consensus 630 fGl~~~~~~~~~-----~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 704 (786)
||.+........ .....++..|++||......++.++||||+|+++|||++|+.|+...........+......
T Consensus 148 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~- 226 (268)
T cd06630 148 FGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASA- 226 (268)
T ss_pred cccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhcc-
Confidence 999854432211 11234566799999988788999999999999999999999998643322111111111000
Q ss_pred cccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 705 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
...+ ..+......+.+++.+|++.+|++||++.|+++|++|
T Consensus 227 ------~~~~----~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~ 267 (268)
T cd06630 227 ------TTAP----SIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVF 267 (268)
T ss_pred ------CCCC----CCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCccc
Confidence 0011 1122333467788899999999999999999998875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-35 Score=302.80 Aligned_cols=252 Identities=18% Similarity=0.332 Sum_probs=197.2
Q ss_pred CCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
+|...+.||+|+||.||+|..+ +|..||+|.+..... ...+.+.+|++++++++|+||+++++++.. .+.
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~-------~~~ 73 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQE-------NGR 73 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheecc-------CCe
Confidence 4677889999999999999965 588999999875432 234678899999999999999999998764 456
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC-cccccCCCcc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL-VAKISSYNLP 633 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~-~~kl~DfGl~ 633 (786)
.++|+||+++++|.+++.... ...+++..+..++.|+++||.|||+. +++|+||||+||+++++. .+|++|||.+
T Consensus 74 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~ 149 (257)
T cd08225 74 LFIVMEYCDGGDLMKRINRQR-GVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIA 149 (257)
T ss_pred EEEEEecCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccc
Confidence 899999999999999997532 23589999999999999999999997 999999999999999885 4699999998
Q ss_pred ccccccc-ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 634 LLAENAE-KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 634 ~~~~~~~-~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
....... ......++..|+|||......++.++|||||||++|||++|+.|+......... ...... .... .
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~---~~~~~~---~~~~-~ 222 (257)
T cd08225 150 RQLNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLV---LKICQG---YFAP-I 222 (257)
T ss_pred hhccCCcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHH---HHHhcc---cCCC-C
Confidence 6543222 122234566799999988888999999999999999999999998754332211 111110 0000 1
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
.+ .....+.+++.+||+.+|++|||+.||++|+|+
T Consensus 223 ~~--------~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 223 SP--------NFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred CC--------CCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 11 112356788889999999999999999988763
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=305.01 Aligned_cols=247 Identities=17% Similarity=0.259 Sum_probs=186.7
Q ss_pred ccCCCCCceeEEEEec-CCcEEEEEEecccCCC---ChHHHHHHHHHHh---cCCCCCcceeeeeeeeccccCCCCceEE
Q 003926 484 FMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH---STRNFMHHIELIS---KLRHRHLVSALGHCFECYFDDSSVSRIF 556 (786)
Q Consensus 484 ~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~---~~~~f~~E~~~l~---~l~H~NIv~l~g~~~~~~~~~~~~~~~~ 556 (786)
.||+|+||.||++... +++.||||.+...... ....+.+|..+++ ..+||||+.+++++.. .+..+
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~~~~ 73 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHT-------PDKLC 73 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEec-------CCeEE
Confidence 4899999999999964 6899999998754322 1233455554433 4479999999887764 35689
Q ss_pred EEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccc
Q 003926 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636 (786)
Q Consensus 557 LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~ 636 (786)
+||||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+||++++++.+|++|||++...
T Consensus 74 lv~e~~~~~~L~~~i~~~---~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~ 147 (279)
T cd05633 74 FILDLMNGGDLHYHLSQH---GVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDF 147 (279)
T ss_pred EEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceec
Confidence 999999999999998753 3589999999999999999999997 9999999999999999999999999998544
Q ss_pred ccccccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccccccc
Q 003926 637 ENAEKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPA 715 (786)
Q Consensus 637 ~~~~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 715 (786)
.... .....++..|+|||.... ..++.++|||||||++|||++|+.||.......... +...... .+..
T Consensus 148 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~-~~~~~~~--------~~~~ 217 (279)
T cd05633 148 SKKK-PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTLT--------VNVE 217 (279)
T ss_pred cccC-ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHH-HHHHhhc--------CCcC
Confidence 3221 122356778999998764 458999999999999999999999986432211111 1111100 0111
Q ss_pred ccccCcHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHHHHHHH
Q 003926 716 VNKACLDESLKTMMEVCVRCLLKNPAERP-----SVEDVLWNLQFAA 757 (786)
Q Consensus 716 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~~l~~~~ 757 (786)
+. +.....+.+++.+||+.||++|| +++|+++|+||..
T Consensus 218 ~~----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~ 260 (279)
T cd05633 218 LP----DSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKG 260 (279)
T ss_pred Cc----cccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccC
Confidence 11 12223566788899999999999 6999999999876
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=308.48 Aligned_cols=268 Identities=22% Similarity=0.313 Sum_probs=197.9
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
++|+..+.||+|+||.||+|..+ +++.||+|.++..... ....+.+|++++++++||||+++++++... ...
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~-----~~~ 79 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGS-----NLD 79 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEec-----CCC
Confidence 46777899999999999999975 6899999999755432 234678999999999999999999987641 125
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..|+||||++ ++|.+++.... ..+++.....++.|++.||+|||+. +++||||||+||+++.++.+||+|||++
T Consensus 80 ~~~lv~e~~~-~~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~ 153 (293)
T cd07843 80 KIYMVMEYVE-HDLKSLMETMK--QPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLA 153 (293)
T ss_pred cEEEEehhcC-cCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCce
Confidence 7899999998 59999887532 2589999999999999999999997 9999999999999999999999999998
Q ss_pred cccccc-cccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhc-cc----
Q 003926 634 LLAENA-EKVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD-ES---- 706 (786)
Q Consensus 634 ~~~~~~-~~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~-~~---- 706 (786)
...... .......++..|+|||..... .++.++||||||+++|||++|++||...........+....... ..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (293)
T cd07843 154 REYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPG 233 (293)
T ss_pred eeccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHH
Confidence 654332 222223455679999987654 36899999999999999999999987644322221111111000 00
Q ss_pred ----------cccccccccccccCcHH-HHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 707 ----------ARRSMVDPAVNKACLDE-SLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 707 ----------~~~~~~d~~~~~~~~~~-~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
.........+....+.. ....+.+++.+||+.+|++|||+.|++.|.||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 234 FSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred hhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 00000000011111111 23456788889999999999999999988764
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=305.64 Aligned_cols=252 Identities=18% Similarity=0.343 Sum_probs=198.5
Q ss_pred CCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEE
Q 003926 479 FDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFL 557 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~L 557 (786)
|...+.||+|++|.||+|.. .+++.||+|+++.......+.+.+|+.++++++||||+++++++.. .+..++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~-------~~~~~~ 93 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLV-------GDELWV 93 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEc-------CCeEEE
Confidence 34457899999999999985 4689999999875544445678999999999999999999998764 456899
Q ss_pred EEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccc
Q 003926 558 IFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637 (786)
Q Consensus 558 V~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~ 637 (786)
|+||+++++|.+++.. ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+|++|||++....
T Consensus 94 v~e~~~~~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~ 166 (285)
T cd06648 94 VMEFLEGGALTDIVTH----TRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVS 166 (285)
T ss_pred EEeccCCCCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhc
Confidence 9999999999999875 2588999999999999999999997 99999999999999999999999999875432
Q ss_pred ccc-ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccc
Q 003926 638 NAE-KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAV 716 (786)
Q Consensus 638 ~~~-~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 716 (786)
... ......++..|++||......++.++|||||||++|||++|+.|+...........+. ... .+..
T Consensus 167 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~---~~~--------~~~~ 235 (285)
T cd06648 167 KEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIR---DNL--------PPKL 235 (285)
T ss_pred cCCcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHH---hcC--------CCCC
Confidence 211 1122345678999999888889999999999999999999999986544322211111 110 0000
Q ss_pred cccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 717 NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 717 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.. .......+.+++.+||+.+|++||++.|+++|.++..
T Consensus 236 ~~--~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 274 (285)
T cd06648 236 KN--LHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAK 274 (285)
T ss_pred cc--cccCCHHHHHHHHHHcccChhhCcCHHHHccCccccc
Confidence 00 0112235778888999999999999999999888654
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-35 Score=304.39 Aligned_cols=252 Identities=17% Similarity=0.276 Sum_probs=199.9
Q ss_pred CCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
+|+..+.||+|+||.||+|+.. ++..||+|.+..... ...+.+.+|++++++++||||+++++++.. ..
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~ 73 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQD-------EE 73 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcC-------CC
Confidence 4777899999999999999965 689999999975432 235679999999999999999999987754 45
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++|+||+++++|.+++... ..+++.....++.|+++||.|||+. +++|+||||+||++++++.++++|||++
T Consensus 74 ~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~ 147 (258)
T cd05578 74 NMYLVVDLLLGGDLRYHLSQK---VKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIA 147 (258)
T ss_pred eEEEEEeCCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccc
Confidence 689999999999999999753 3688999999999999999999987 9999999999999999999999999998
Q ss_pred cccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccccc
Q 003926 634 LLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVD 713 (786)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 713 (786)
.............+...|++||......++.++||||||+++|||++|+.|+................. ..
T Consensus 148 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-----~~---- 218 (258)
T cd05578 148 TKVTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET-----AD---- 218 (258)
T ss_pred cccCCCccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc-----cc----
Confidence 654433222334456678999998888899999999999999999999999876543211111111100 00
Q ss_pred ccccccCcHHHHHHHHHHHHHhccCCCCCCCCH--HHHHHHHHH
Q 003926 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSV--EDVLWNLQF 755 (786)
Q Consensus 714 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~--~evl~~l~~ 755 (786)
+..+ ......+.+++.+||+.||.+||++ +|+++|.||
T Consensus 219 ~~~~----~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 219 VLYP----ATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred ccCc----ccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 1111 1122466788899999999999999 998877653
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=306.57 Aligned_cols=267 Identities=22% Similarity=0.337 Sum_probs=198.4
Q ss_pred CCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
+|+..+.||+|++|.||+|+.. +|..||||+++..... ..+.+.+|++++++++|+||+++++++.. .+..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------~~~~ 73 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHT-------ENKL 73 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEee-------CCcE
Confidence 4778899999999999999965 6899999999765432 34668899999999999999999999875 3568
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
++||||+++ +|.+++........+++.....++.|++.||.|||+. +++||||||+||++++++.+|++|||++..
T Consensus 74 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~ 149 (284)
T cd07836 74 MLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARA 149 (284)
T ss_pred EEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhh
Confidence 999999985 8999887543334689999999999999999999987 999999999999999999999999999864
Q ss_pred ccccc-ccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHH-HHHHHHHHHhcccccccc-
Q 003926 636 AENAE-KVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLL-KNQLQAVVTADESARRSM- 711 (786)
Q Consensus 636 ~~~~~-~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~- 711 (786)
..... ......++..|++||.... ..++.++|||||||++|||++|++||........ .................+
T Consensus 150 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (284)
T cd07836 150 FGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGIS 229 (284)
T ss_pred hcCCccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHh
Confidence 43211 1122234567899998755 3578899999999999999999999876543222 222111111100000000
Q ss_pred ----cccccc-------ccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 712 ----VDPAVN-------KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 712 ----~d~~~~-------~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
...... ..........+.+++.+|++.||.+||++.|++++.||
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 230 QLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred cCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 000000 00011223456788899999999999999999988764
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-35 Score=315.92 Aligned_cols=273 Identities=19% Similarity=0.315 Sum_probs=200.7
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
+++|+..+.||+|+||.||+|+. .+|+.||||++..... .....+.+|++++++++|+||+++++++....+ ....
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~~~~ 81 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSF--ESFN 81 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccc--cccc
Confidence 46788899999999999999985 4689999999864322 234668899999999999999999998764322 1234
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++|+||+++ +|.+++.. ..+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 82 ~~~lv~e~~~~-~l~~~~~~----~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~ 153 (336)
T cd07849 82 DVYIVQELMET-DLYKLIKT----QHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLA 153 (336)
T ss_pred eEEEEehhccc-CHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccce
Confidence 68999999974 88888764 3589999999999999999999997 9999999999999999999999999998
Q ss_pred ccccccccc----ccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhc-ccc
Q 003926 634 LLAENAEKV----GHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD-ESA 707 (786)
Q Consensus 634 ~~~~~~~~~----~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~-~~~ 707 (786)
......... ....++..|+|||.+.. ..++.++|||||||++|||++|++||...+.......+....... ...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~ 233 (336)
T cd07849 154 RIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQED 233 (336)
T ss_pred eeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHH
Confidence 654322111 12345677999998654 458899999999999999999999997644322111111111100 000
Q ss_pred cccccc-------------cccc-ccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 708 RRSMVD-------------PAVN-KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 708 ~~~~~d-------------~~~~-~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
...+.+ +... ..........+.+++.+||+.||++|||+.|+++|+|+...
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~ 298 (336)
T cd07849 234 LNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQY 298 (336)
T ss_pred HHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCcccccc
Confidence 000000 0000 00001123457789999999999999999999999998754
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=303.71 Aligned_cols=262 Identities=18% Similarity=0.306 Sum_probs=200.4
Q ss_pred HhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCCCC
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++++|+..+.||+|+||.||+|..+ +++.||+|.+..... ..++|.+|+++++++ +|+||+++++++...... ...
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~-~~~ 81 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPP-GND 81 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCC-Ccc
Confidence 5678999999999999999999975 588999999875442 346799999999999 799999999998753210 124
Q ss_pred ceEEEEEecCCCCChhHHhhcCC-CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGH-AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
...++||||+++++|.+++.... ....+++..+..++.|+++||.|||+. +++|+||+|+||++++++.+|++|||
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d~~ 158 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDFG 158 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECCCc
Confidence 56899999999999999986522 134689999999999999999999997 99999999999999999999999999
Q ss_pred ccccccccc-ccccccccccccCcccccc-----CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcc
Q 003926 632 LPLLAENAE-KVGHVIPYSGSIDPTNSAR-----GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADE 705 (786)
Q Consensus 632 l~~~~~~~~-~~~~~~~~~~~~aPe~~~~-----~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 705 (786)
++....... ......++..|+|||.+.. ..++.++|||||||++|||++|++||...........+ ..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~--- 232 (275)
T cd06608 159 VSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKI---PR--- 232 (275)
T ss_pred cceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHh---hc---
Confidence 985443221 1223345677999997643 34788999999999999999999998654322111110 00
Q ss_pred ccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 706 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
.....+. ........+.+++.+||..||++|||+.|+++|+|
T Consensus 233 ~~~~~~~-------~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~ 274 (275)
T cd06608 233 NPPPTLK-------SPENWSKKFNDFISECLIKNYEQRPFMEELLEHPF 274 (275)
T ss_pred cCCCCCC-------chhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCC
Confidence 0000111 11223345678889999999999999999998876
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=306.49 Aligned_cols=264 Identities=20% Similarity=0.326 Sum_probs=195.9
Q ss_pred CCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 479 FDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
|+..+.||+|++|.||+|... +|..||||++..... ...+.+.+|++++++++||||+++++++.. .+..
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~-------~~~~ 73 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHS-------ENKL 73 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheecc-------CCeE
Confidence 456788999999999999864 799999999875532 234678999999999999999999998864 3568
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
++||||++ ++|.+++.... ...+++..+..++.|+++||+|||+. +++||||+|+||+++.++.+||+|||++..
T Consensus 74 ~iv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~ 148 (283)
T cd07835 74 YLVFEFLD-LDLKKYMDSSP-LTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARA 148 (283)
T ss_pred EEEEeccC-cCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccc
Confidence 99999995 69999987533 23689999999999999999999997 999999999999999999999999999864
Q ss_pred ccccc-ccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCchh-HHHHHHHHHHHHhcccc-----
Q 003926 636 AENAE-KVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVVTADESA----- 707 (786)
Q Consensus 636 ~~~~~-~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~~~-~~~~~~~~~~~~~~~~~----- 707 (786)
..... ......++..|+|||.+... .++.++|||||||++|||++|++||...+. .................
T Consensus 149 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (283)
T cd07835 149 FGVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVT 228 (283)
T ss_pred cCCCccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhh
Confidence 43211 11222345678999987654 478999999999999999999999875433 22222222111000000
Q ss_pred --------ccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 708 --------RRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 708 --------~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
......+.. ..........+.+++.+||+.||++|||++|++.+.||
T Consensus 229 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 229 SLPDYKPTFPKWARQDL-SKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred hchhhhhhcccccccch-hhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 000000000 00111122457789999999999999999999988764
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-34 Score=299.70 Aligned_cols=252 Identities=20% Similarity=0.388 Sum_probs=196.0
Q ss_pred CCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
.|+..+.||+|+||.||+|... ++..||+|.++..... ..+.+.+|++++++++|+||+++++++.. .+.
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-------~~~ 73 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVH-------REK 73 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEec-------CCE
Confidence 3667889999999999999864 6899999998766543 45679999999999999999999998754 456
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++|+||+++++|.+++... ..+++..+..++.++++|+.|||+. +++|+||+|+||++++++.+||+|||++.
T Consensus 74 ~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~ 147 (264)
T cd06626 74 VYIFMEYCSGGTLEELLEHG---RILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAV 147 (264)
T ss_pred EEEEEecCCCCcHHHHHhhc---CCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccccccc
Confidence 89999999999999999753 3478899999999999999999997 99999999999999999999999999986
Q ss_pred cccccccc-----ccccccccccCccccccCC---CCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccc
Q 003926 635 LAENAEKV-----GHVIPYSGSIDPTNSARGK---LEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADES 706 (786)
Q Consensus 635 ~~~~~~~~-----~~~~~~~~~~aPe~~~~~~---~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (786)
........ ....+...|++||...... ++.++||||||+++|||++|+.||...+.... ..... ...
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~--~~~~~-~~~-- 222 (264)
T cd06626 148 KLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQ--IMFHV-GAG-- 222 (264)
T ss_pred ccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHH--HHHHH-hcC--
Confidence 54322111 1234456789999987665 88999999999999999999999865421111 00000 000
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
..+.++.. ......+.+++.+||+.+|++||++.|++.+.|
T Consensus 223 -----~~~~~~~~--~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~ 263 (264)
T cd06626 223 -----HKPPIPDS--LQLSPEGKDFLDRCLESDPKKRPTASELLQHPF 263 (264)
T ss_pred -----CCCCCCcc--cccCHHHHHHHHHHccCCcccCCCHHHHhcCCC
Confidence 01111111 011234567888999999999999999998765
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=307.86 Aligned_cols=259 Identities=16% Similarity=0.270 Sum_probs=193.4
Q ss_pred CCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC-CChHHHHHHHHHHhcCC-CCCcceeeeeeeeccccCCCCce
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLR-HRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~-H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
+|...+.||+|+||.||++... +++.||+|++..... .....+.+|+.++.++. |+|||+++|++.. ...
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~-------~~~ 77 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFR-------EGD 77 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEec-------CCc
Confidence 3445678999999999999854 689999999875433 23457899999999996 9999999998764 345
Q ss_pred EEEEEecCCCCChhHHh---hcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 555 IFLIFEYVPNGTLRSWI---SEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l---~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
.+++|||++. ++.++. ... ....+++.....++.+++.||+|||+. .+++||||||+||+++.++.+||+|||
T Consensus 78 ~~~~~e~~~~-~l~~l~~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg 153 (288)
T cd06616 78 CWICMELMDI-SLDKFYKYVYEV-LKSVIPEEILGKIAVATVKALNYLKEE--LKIIHRDVKPSNILLDRNGNIKLCDFG 153 (288)
T ss_pred EEEEEecccC-CHHHHHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhhc--CCeeccCCCHHHEEEccCCcEEEeecc
Confidence 7999999874 555433 221 124689999999999999999999974 289999999999999999999999999
Q ss_pred cccccccccccccccccccccCccccccC---CCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccc
Q 003926 632 LPLLAENAEKVGHVIPYSGSIDPTNSARG---KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESAR 708 (786)
Q Consensus 632 l~~~~~~~~~~~~~~~~~~~~aPe~~~~~---~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (786)
++.............++..|++||.+... .++.++|||||||++|||++|++||..... ....+.......
T Consensus 154 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~~~~~~~~~~~~---- 227 (288)
T cd06616 154 ISGQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS--VFDQLTQVVKGD---- 227 (288)
T ss_pred hhHHhccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch--HHHHHhhhcCCC----
Confidence 98644322222233456679999988765 689999999999999999999999865431 111111111100
Q ss_pred cccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 709 RSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 709 ~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.+.+...........+.+++.+||+.+|++|||+.||+.|.|+..
T Consensus 228 ----~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 272 (288)
T cd06616 228 ----PPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKD 272 (288)
T ss_pred ----CCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhc
Confidence 011111111123346778889999999999999999999999865
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=307.99 Aligned_cols=273 Identities=21% Similarity=0.276 Sum_probs=196.5
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC--CChHHHHHHHHHHhcCC-CCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC--HSTRNFMHHIELISKLR-HRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~-H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|+..+.||+|+||.||+|+.. +|+.||||.++.... .....+.+|++++++++ |+||+++++++..... ...
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~--~~~ 78 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEK--NGK 78 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCC--CCC
Confidence 36788899999999999999965 689999998875432 23467899999999995 6999999998764211 122
Q ss_pred ceEEEEEecCCCCChhHHhhcCCC--CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC-CCcccccC
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHA--HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ-NLVAKISS 629 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~--~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~-~~~~kl~D 629 (786)
...|+||||+++ +|.+++..... ...+++.....++.|++.||+|||+. +|+||||||+||+++. ++.+||+|
T Consensus 79 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~d 154 (295)
T cd07837 79 PSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIAD 154 (295)
T ss_pred ceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEee
Confidence 347999999985 89988865321 24689999999999999999999997 9999999999999998 88999999
Q ss_pred CCcccccccc-cccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchh-HHHHHHHHHHHHhccc
Q 003926 630 YNLPLLAENA-EKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVVTADES 706 (786)
Q Consensus 630 fGl~~~~~~~-~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~-~~~~~~~~~~~~~~~~ 706 (786)
||++...... .......++..|+|||.+.. ..++.++|||||||++|||++|++||..... ................
T Consensus 155 fg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (295)
T cd07837 155 LGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQ 234 (295)
T ss_pred cccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence 9998643221 11122234567899998754 4578999999999999999999999865432 2222222111000000
Q ss_pred ccccc---cc----cc----ccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 707 ARRSM---VD----PA----VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 707 ~~~~~---~d----~~----~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
..... .+ +. ............+.+++.+||+.||++||++.|++.|.|+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~ 294 (295)
T cd07837 235 VWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYF 294 (295)
T ss_pred hCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCc
Confidence 00000 00 00 0000011223457788999999999999999999998875
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-34 Score=312.24 Aligned_cols=276 Identities=18% Similarity=0.278 Sum_probs=201.0
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC--CCChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK--CHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~~ 551 (786)
.++|+..+.||+|+||.||+|... +|+.||||++.... ......+.+|+.+++++ +||||++++|+|... .
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~-----~ 80 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAE-----N 80 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccC-----C
Confidence 456777899999999999999965 68899999886432 22345678899999999 999999999987531 1
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
....++||||++ ++|.+++... .++|..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 81 ~~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g 152 (337)
T cd07852 81 DKDIYLVFEYME-TDLHAVIRAN----ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFG 152 (337)
T ss_pred CceEEEEecccc-cCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeecc
Confidence 345799999998 5999998752 588999999999999999999997 99999999999999999999999999
Q ss_pred ccccccccc------ccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHh-
Q 003926 632 LPLLAENAE------KVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTA- 703 (786)
Q Consensus 632 l~~~~~~~~------~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~- 703 (786)
++....... ......++..|++||.+.. ..++.++|||||||++|||+||++||...........+......
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 232 (337)
T cd07852 153 LARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPP 232 (337)
T ss_pred chhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence 986443221 1112345667999997654 45788999999999999999999998654322211111111000
Q ss_pred ccc--------ccccccc----ccc--cccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhhhhhc
Q 003926 704 DES--------ARRSMVD----PAV--NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWH 764 (786)
Q Consensus 704 ~~~--------~~~~~~d----~~~--~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~~~~~ 764 (786)
... ....+.+ ... ...........+.+++.+||+.||++|||+.|++++.|+.+.....|.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~~~~~~ 307 (337)
T cd07852 233 SAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFHNPSDE 307 (337)
T ss_pred CHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhccCCCC
Confidence 000 0000000 000 000001123467788999999999999999999999998875444333
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-34 Score=300.72 Aligned_cols=257 Identities=17% Similarity=0.303 Sum_probs=193.2
Q ss_pred CCccCccCCCCCceeEEEEec----CCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 479 FDTSAFMGEGSQGQMYRGRLK----NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
|...+.||+|+||.||+|... +++.||||++...... ..+++.+|++++++++||||+++++++...... ...
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~-~~~ 79 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAK-GRL 79 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCC-Ccc
Confidence 456788999999999999853 3689999998754322 345789999999999999999999987642110 011
Q ss_pred ceEEEEEecCCCCChhHHhhcCC---CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccC
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGH---AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISS 629 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~---~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 629 (786)
...++++||+++|+|.+++.... ....+++.....++.|++.||+|||+. +|+||||||+||+++.++.+|++|
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~d 156 (273)
T cd05074 80 PIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVAD 156 (273)
T ss_pred cceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECc
Confidence 23578999999999998875321 123578999999999999999999987 999999999999999999999999
Q ss_pred CCccccccccccc---ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcc
Q 003926 630 YNLPLLAENAEKV---GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADE 705 (786)
Q Consensus 630 fGl~~~~~~~~~~---~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 705 (786)
||+++........ ........|++||......++.++||||||+++|||++ |++|+...........+.. ..
T Consensus 157 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~----~~ 232 (273)
T cd05074 157 FGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIK----GN 232 (273)
T ss_pred ccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHc----CC
Confidence 9998654322111 11122346789998888888999999999999999999 8898875543332222111 00
Q ss_pred ccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 706 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
. ..... .....+.+++.+||+.+|++||++.|+++.+.
T Consensus 233 ----~---~~~~~----~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~ 270 (273)
T cd05074 233 ----R---LKQPP----DCLEDVYELMCQCWSPEPKCRPSFQHLRDQLE 270 (273)
T ss_pred ----c---CCCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 0 00011 12246778899999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-34 Score=306.88 Aligned_cols=255 Identities=18% Similarity=0.245 Sum_probs=197.6
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|+..+.||+|+||.||+++.. +++.||+|.+..... ...+.+.+|+++++.++||||+++++.+.. .
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-------~ 73 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFET-------K 73 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEec-------C
Confidence 36788899999999999999965 588999999875532 224568899999999999999999988764 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..++||||+++|+|.+++... ..+++.....++.++++||+|||+. +++||||||+||+++.++.+|++|||+
T Consensus 74 ~~~~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~ 147 (305)
T cd05609 74 RHLCMVMEYVEGGDCATLLKNI---GALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGL 147 (305)
T ss_pred CEEEEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCC
Confidence 5789999999999999999753 3588999999999999999999997 999999999999999999999999999
Q ss_pred cccccccc----------------ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHH
Q 003926 633 PLLAENAE----------------KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQ 696 (786)
Q Consensus 633 ~~~~~~~~----------------~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~ 696 (786)
++...... ......++..|+|||.+....++.++|||||||++|||++|+.||.......+...
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~ 227 (305)
T cd05609 148 SKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQ 227 (305)
T ss_pred ccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 75321000 00112345678999998888899999999999999999999999875443322211
Q ss_pred HHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCC---HHHHHHHHHHHH
Q 003926 697 LQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPS---VEDVLWNLQFAA 757 (786)
Q Consensus 697 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt---~~evl~~l~~~~ 757 (786)
. .... ...+.... .....+.+++.+||+.+|++||+ +.|+++++|+..
T Consensus 228 ~---~~~~------~~~~~~~~----~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~ 278 (305)
T cd05609 228 V---ISDD------IEWPEGDE----ALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLG 278 (305)
T ss_pred H---Hhcc------cCCCCccc----cCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccC
Confidence 1 1100 01111111 12234678888999999999998 688888888743
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-34 Score=304.62 Aligned_cols=249 Identities=18% Similarity=0.342 Sum_probs=196.3
Q ss_pred CccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEEEEec
Q 003926 483 AFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEY 561 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV~Ey 561 (786)
..||+|+||.||+|..+ +|..||||++..........+.+|+.++++++|+||+++++++.. .+..++||||
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-------~~~~~lv~e~ 98 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-------GDELWVVMEF 98 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEe-------CCEEEEEEec
Confidence 57999999999999864 789999999865544445679999999999999999999998865 4578999999
Q ss_pred CCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccccccc-
Q 003926 562 VPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE- 640 (786)
Q Consensus 562 ~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~- 640 (786)
+++++|.+++.. ..+++.....++.|++.|++|||+. +++||||||+||+++.++.++++|||++.......
T Consensus 99 ~~~~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~ 171 (292)
T cd06657 99 LEGGALTDIVTH----TRMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP 171 (292)
T ss_pred CCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceecccccc
Confidence 999999998854 2478999999999999999999997 99999999999999999999999999875432211
Q ss_pred ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccccccC
Q 003926 641 KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKAC 720 (786)
Q Consensus 641 ~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 720 (786)
......++..|++||......++.++|||||||++|||++|++|+...........+.. .. . +... .
T Consensus 172 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~---~~----~----~~~~--~ 238 (292)
T cd06657 172 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD---NL----P----PKLK--N 238 (292)
T ss_pred cccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh---hC----C----cccC--C
Confidence 11223456779999998878889999999999999999999999875443322211111 00 0 0000 0
Q ss_pred cHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 721 LDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 721 ~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
.......+.+++.+||+.+|.+||++.|++.|.|+...
T Consensus 239 ~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~ 276 (292)
T cd06657 239 LHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 276 (292)
T ss_pred cccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhcc
Confidence 01112345677889999999999999999999998764
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-34 Score=311.80 Aligned_cols=272 Identities=14% Similarity=0.226 Sum_probs=201.3
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
++|+..+.||+|+||.||+|+.. +|..||+|++..... ...+.+.+|+.++++++||||+++++++.... ....
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~---~~~~ 81 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPG---ADFK 81 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccC---CCCc
Confidence 67888899999999999999854 699999999875432 23467889999999999999999998765421 2235
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++||||+. |+|.+++... ..+++.....++.|+++||+|||+. +|+||||||+||++++++.+||+|||++
T Consensus 82 ~~~lv~e~~~-~~l~~~~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~ 154 (334)
T cd07855 82 DVYVVMDLME-SDLHHIIHSD---QPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMA 154 (334)
T ss_pred eEEEEEehhh-hhHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccccc
Confidence 6899999996 6999998653 3489999999999999999999997 9999999999999999999999999998
Q ss_pred cccccccc-----cccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcc-c
Q 003926 634 LLAENAEK-----VGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADE-S 706 (786)
Q Consensus 634 ~~~~~~~~-----~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~-~ 706 (786)
........ .....++..|++||.+.. ..++.++|||||||++|||++|++||...+.......+........ .
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~ 234 (334)
T cd07855 155 RGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEE 234 (334)
T ss_pred eeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhH
Confidence 54432111 112345667899998754 4589999999999999999999999976543221111111100000 0
Q ss_pred --------ccccc---cccccc---ccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 707 --------ARRSM---VDPAVN---KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 707 --------~~~~~---~d~~~~---~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
..... ...... ..........+.+++.+||+.+|++||++.|++.|+|+.+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~ 300 (334)
T cd07855 235 VLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQY 300 (334)
T ss_pred hhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhc
Confidence 00000 000000 00011224567889999999999999999999999998864
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-34 Score=301.86 Aligned_cols=270 Identities=21% Similarity=0.299 Sum_probs=198.1
Q ss_pred CCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC--ChHHHHHHHHHHhcC---CCCCcceeeeeeeeccccCCCC
Q 003926 479 FDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKL---RHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l---~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
|+..+.||+|+||.||+|+.+ +++.||+|+++..... ....+.+|+++++++ +|+||+++++++..... ...
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~--~~~ 78 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRT--DRE 78 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccC--CCC
Confidence 556789999999999999976 4899999999754322 234577888877665 69999999999875321 112
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
...+++|||++ ++|.+++.... ...+++..+..++.|+++||+|||+. +++|+||+|+||+++.++.+||+|||+
T Consensus 79 ~~~~l~~e~~~-~~l~~~l~~~~-~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~ 153 (287)
T cd07838 79 LKLTLVFEHVD-QDLATYLSKCP-KPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGL 153 (287)
T ss_pred ceeEEEehhcc-cCHHHHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCc
Confidence 34899999997 48999887532 23589999999999999999999997 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhH-HHHHHHHHHHHhccccccc-
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVD-LLKNQLQAVVTADESARRS- 710 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~- 710 (786)
+.............++..|++||......++.++|||||||++|||++|++|+...... ...................
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07838 154 ARIYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRN 233 (287)
T ss_pred ceeccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCC
Confidence 86654333222333556789999998888999999999999999999999998764432 2222222111100000000
Q ss_pred ------cccccc---cccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 711 ------MVDPAV---NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 711 ------~~d~~~---~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
...... ......+....+.+++.+||+.||++||++.|++.|.||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 234 VSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred cccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 000000 011112334567789999999999999999999988763
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-34 Score=297.08 Aligned_cols=247 Identities=23% Similarity=0.445 Sum_probs=194.2
Q ss_pred CccCccCCCCCceeEEEEecC-----CcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 480 DTSAFMGEGSQGQMYRGRLKN-----GTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 480 ~~~~~iG~G~fg~Vy~~~~~~-----g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
...+.||+|+||.||+|+..+ +..||+|+++..... ..+.+.+|++++++++|+||+++++++.. .+
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------~~ 74 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTE-------EE 74 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcC-------CC
Confidence 456889999999999999653 388999999765433 45789999999999999999999998865 35
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..+++|||+++|+|.+++..... ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.+|++|||++
T Consensus 75 ~~~~i~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~ 150 (258)
T smart00219 75 PLMIVMEYMEGGDLLDYLRKNRP-KELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLS 150 (258)
T ss_pred eeEEEEeccCCCCHHHHHHhhhh-ccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCc
Confidence 68999999999999999975321 1289999999999999999999998 9999999999999999999999999998
Q ss_pred ccccccccccc--ccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 634 LLAENAEKVGH--VIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 634 ~~~~~~~~~~~--~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
........... ..++..|++||......++.++||||+|+++|||++ |++|+...........+. ... .
T Consensus 151 ~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~---~~~---~-- 222 (258)
T smart00219 151 RDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLK---KGY---R-- 222 (258)
T ss_pred eecccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh---cCC---C--
Confidence 65543321111 124467899999877889999999999999999999 788887544333322211 110 0
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWN 752 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 752 (786)
. .... .....+.+++.+|+..+|++|||+.|+++.
T Consensus 223 ~---~~~~----~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 257 (258)
T smart00219 223 L---PKPE----NCPPEIYKLMLQCWAEDPEDRPTFSELVEI 257 (258)
T ss_pred C---CCCC----cCCHHHHHHHHHHCcCChhhCcCHHHHHhh
Confidence 0 0011 123457788899999999999999999865
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-34 Score=307.48 Aligned_cols=268 Identities=18% Similarity=0.281 Sum_probs=195.0
Q ss_pred CccCCC--CCceeEEEEe-cCCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEE
Q 003926 483 AFMGEG--SQGQMYRGRL-KNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFL 557 (786)
Q Consensus 483 ~~iG~G--~fg~Vy~~~~-~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~L 557 (786)
..||+| +||+||+|+. .+|+.||||++...... ..+.+.+|+.+++.++||||+++++++.. .+..++
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~-------~~~~~~ 76 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTT-------GSWLWV 76 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEec-------CCceEE
Confidence 456666 9999999986 47999999998754332 23578899999999999999999999865 456899
Q ss_pred EEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccc
Q 003926 558 IFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637 (786)
Q Consensus 558 V~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~ 637 (786)
||||+++|+|.+++.... ...+++.....++.|++.||+|||+. +|+||||||+||+++.++.+|++||+......
T Consensus 77 v~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~ 152 (328)
T cd08226 77 ISPFMAYGSANSLLKTYF-PEGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLV 152 (328)
T ss_pred EEecccCCCHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhh
Confidence 999999999999987532 23588999999999999999999987 99999999999999999999999998643221
Q ss_pred c-cccc-------ccccccccccCccccccC--CCCcccceeehhHHHHHHHhCCCCCCCchhHH-HHHHHHHHHHhcc-
Q 003926 638 N-AEKV-------GHVIPYSGSIDPTNSARG--KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL-LKNQLQAVVTADE- 705 (786)
Q Consensus 638 ~-~~~~-------~~~~~~~~~~aPe~~~~~--~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~-~~~~~~~~~~~~~- 705 (786)
. .... ....+...|++||.+.+. .++.++|||||||++|||++|++||....... .............
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 232 (328)
T cd08226 153 RNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLD 232 (328)
T ss_pred ccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCcc
Confidence 1 1000 011223458999998653 47899999999999999999999997543211 1111100000000
Q ss_pred ------------------------cc-----ccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 706 ------------------------SA-----RRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 706 ------------------------~~-----~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
.. ...+.+..............+.+++.+||+.||++|||+.|+++|.|+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~ 312 (328)
T cd08226 233 ITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFK 312 (328)
T ss_pred ccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHH
Confidence 00 0000111111111223456788999999999999999999999999998
Q ss_pred HHhhh
Q 003926 757 AQVQD 761 (786)
Q Consensus 757 ~~~~~ 761 (786)
...+.
T Consensus 313 ~~~~~ 317 (328)
T cd08226 313 QVKEQ 317 (328)
T ss_pred HHHHh
Confidence 76654
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-34 Score=303.85 Aligned_cols=268 Identities=18% Similarity=0.263 Sum_probs=194.2
Q ss_pred HhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++++|...+.||+|+||.||+|... +|..||+|++...... ....+.+|++++++++|+||+++.+++.. .
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~-------~ 75 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHT-------K 75 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEec-------C
Confidence 4567888999999999999999854 6899999998754332 23567899999999999999999998764 3
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..|+||||++ +++.+++.... ..+.+.....++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 76 ~~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~ 149 (291)
T cd07870 76 ETLTFVFEYMH-TDLAQYMIQHP--GGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGL 149 (291)
T ss_pred CeEEEEEeccc-CCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEecccc
Confidence 56899999996 68877765432 3477888889999999999999997 999999999999999999999999999
Q ss_pred cccccccc-ccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCchh--HHHHHHHHHHHHhccc--
Q 003926 633 PLLAENAE-KVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRKEV--DLLKNQLQAVVTADES-- 706 (786)
Q Consensus 633 ~~~~~~~~-~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~~~--~~~~~~~~~~~~~~~~-- 706 (786)
++...... ......++..|+|||...+. .++.++|||||||++|||++|++||..... +.+.............
T Consensus 150 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (291)
T cd07870 150 ARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTW 229 (291)
T ss_pred ccccCCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhh
Confidence 86432211 11223346679999987653 478899999999999999999999875432 1111111100000000
Q ss_pred -------ccccccc----ccccccCcH--HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 707 -------ARRSMVD----PAVNKACLD--ESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 707 -------~~~~~~d----~~~~~~~~~--~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
....... +........ .....+.+++.+|++.||++|||+.|++.|.||
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 230 PGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred hhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 0000000 000000000 012356678889999999999999999988764
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-34 Score=305.18 Aligned_cols=250 Identities=18% Similarity=0.342 Sum_probs=193.8
Q ss_pred CCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC---ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 479 FDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH---STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~---~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
|+..+.||+|+||.||+|+.. ++..||+|++...... ....+.+|++++++++|+|+|+++++|.. .+.
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-------~~~ 99 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLR-------EHT 99 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-------CCe
Confidence 566788999999999999954 6899999998754322 23568899999999999999999999875 356
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++||||++ |+|.+++... ...++|.++..++.+++.|+.|||+. +|+||||+|+||+++.++.+||+|||++.
T Consensus 100 ~~lv~e~~~-g~l~~~~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~ 173 (317)
T cd06635 100 AWLVMEYCL-GSASDLLEVH--KKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSAS 173 (317)
T ss_pred EEEEEeCCC-CCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCcc
Confidence 899999997 5888877543 23589999999999999999999997 99999999999999999999999999975
Q ss_pred ccccccccccccccccccCccccc---cCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 635 LAENAEKVGHVIPYSGSIDPTNSA---RGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~aPe~~~---~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
..... ....++..|++||.+. .+.++.++|||||||++|||++|++|+...........+ .... .
T Consensus 174 ~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~---~~~~---~--- 241 (317)
T cd06635 174 IASPA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI---AQNE---S--- 241 (317)
T ss_pred ccCCc---ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHH---Hhcc---C---
Confidence 44322 1234566799999863 456899999999999999999999998654322111111 1100 0
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
+... .......+.+++.+||+.+|.+||++.||++|+++...
T Consensus 242 --~~~~---~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 283 (317)
T cd06635 242 --PTLQ---SNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRE 283 (317)
T ss_pred --CCCC---CccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhcc
Confidence 0000 01122346678889999999999999999999987654
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-34 Score=296.74 Aligned_cols=248 Identities=18% Similarity=0.305 Sum_probs=196.1
Q ss_pred cCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEEEEe
Q 003926 485 MGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFE 560 (786)
Q Consensus 485 iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV~E 560 (786)
||+|+||.||+|+.. +++.||+|++..... ...+.+.+|++++++++||||+++++++.. ....++|||
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~~~~lv~e 73 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKD-------KKYIYMLME 73 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEc-------CCccEEEEe
Confidence 699999999999965 589999999875432 234679999999999999999999998764 356899999
Q ss_pred cCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccccccc
Q 003926 561 YVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE 640 (786)
Q Consensus 561 y~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~ 640 (786)
|+++|+|.+++.+. ..+++..+..++.|++.||+|||+. +++|+||||+||+++.++.+|++|||++.......
T Consensus 74 ~~~~~~L~~~l~~~---~~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~ 147 (262)
T cd05572 74 YCLGGELWTILRDR---GLFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ 147 (262)
T ss_pred cCCCCcHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc
Confidence 99999999999763 2488999999999999999999997 99999999999999999999999999986554332
Q ss_pred ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccccccC
Q 003926 641 KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKAC 720 (786)
Q Consensus 641 ~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 720 (786)
......++..|++||......++.++||||||+++|||++|+.|+.....+.. .......... ..+..
T Consensus 148 ~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~-------~~~~~---- 215 (262)
T cd05572 148 KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPM-EIYNDILKGN-------GKLEF---- 215 (262)
T ss_pred ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHH-HHHHHHhccC-------CCCCC----
Confidence 22233456789999998878899999999999999999999999875442111 1111111000 00111
Q ss_pred cHHHHHHHHHHHHHhccCCCCCCCC-----HHHHHHHHHHHH
Q 003926 721 LDESLKTMMEVCVRCLLKNPAERPS-----VEDVLWNLQFAA 757 (786)
Q Consensus 721 ~~~~~~~~~~l~~~Cl~~dP~~RPt-----~~evl~~l~~~~ 757 (786)
+......+.+++.+||+.+|++||+ ++|+++|+||..
T Consensus 216 ~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~ 257 (262)
T cd05572 216 PNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNG 257 (262)
T ss_pred CcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhC
Confidence 1111345778888999999999999 999999999874
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-34 Score=310.64 Aligned_cols=272 Identities=16% Similarity=0.246 Sum_probs=201.1
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccC--CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKK--CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
+.|...+.||+|+||+||+|+. .++..||||+++... ......+.+|+.++++++|+||+++++++..... ....
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~--~~~~ 82 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHR--EAFN 82 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccc--cccC
Confidence 4678889999999999999985 468999999987532 2234567899999999999999999998764211 1224
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++||||+. ++|.+++... ..+++.....++.|++.||.|||+. +++||||||+||+++.++.+||+|||++
T Consensus 83 ~~~lv~e~~~-~~L~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~ 155 (337)
T cd07858 83 DVYIVYELMD-TDLHQIIRSS---QTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLA 155 (337)
T ss_pred cEEEEEeCCC-CCHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCccc
Confidence 5899999996 6899988753 3589999999999999999999997 9999999999999999999999999998
Q ss_pred cccccc-cccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhc-cccccc
Q 003926 634 LLAENA-EKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD-ESARRS 710 (786)
Q Consensus 634 ~~~~~~-~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~ 710 (786)
+..... .......++..|+|||.... ..++.++|||||||++|||++|++||...+.......+....... ......
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (337)
T cd07858 156 RTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGF 235 (337)
T ss_pred cccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhh
Confidence 654332 11222345667999998754 458899999999999999999999997654322211111111000 000000
Q ss_pred c---------------ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 711 M---------------VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 711 ~---------------~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
+ .++... .........+.+++.+||+.+|++|||++|+++|.|+...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~ 297 (337)
T cd07858 236 IRNEKARRYIRSLPYTPRQSFA-RLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL 297 (337)
T ss_pred cCchhhhHHHHhcCcccccCHH-HHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence 0 000000 0011233567789999999999999999999999998754
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-34 Score=302.57 Aligned_cols=265 Identities=20% Similarity=0.288 Sum_probs=196.1
Q ss_pred CCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC-ChHHHHHHHHHHhcCC-CCCcceeeeeeeeccccCCCCceE
Q 003926 479 FDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH-STRNFMHHIELISKLR-HRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~-H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
|...+.||+|+||+||+|+.. +++.||||++...... ......+|+..+++++ |+||+++++++.. .+..
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~-------~~~~ 73 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRE-------NDEL 73 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhc-------CCcE
Confidence 456788999999999999975 5889999998755332 2334567999999999 9999999998865 4568
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
++||||+ +|+|.+++.... ...+++.+++.++.|++.||.|||+. +++|+||+|+||++++++.+||+|||++..
T Consensus 74 ~lv~e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~ 148 (283)
T cd07830 74 YFVFEYM-EGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLARE 148 (283)
T ss_pred EEEEecC-CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeeccccee
Confidence 9999999 889999987643 24689999999999999999999997 999999999999999999999999999865
Q ss_pred cccccccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcc---------
Q 003926 636 AENAEKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADE--------- 705 (786)
Q Consensus 636 ~~~~~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~--------- 705 (786)
...........++..|+|||.... ..++.++||||||+++|||++|++||....................
T Consensus 149 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (283)
T cd07830 149 IRSRPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYK 228 (283)
T ss_pred ccCCCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhh
Confidence 543333333445667899997743 4578999999999999999999999865433221111111100000
Q ss_pred --ccccccccccc---cccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 706 --SARRSMVDPAV---NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 706 --~~~~~~~d~~~---~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
......+.... ...........+.+++.+||+.+|++|||++|++.++|+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 229 LASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred hhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 00000000000 000001113567889999999999999999999988763
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-34 Score=311.40 Aligned_cols=271 Identities=15% Similarity=0.249 Sum_probs=197.8
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.++|...+.||+|+||.||+|+. .+|+.||||+++.... .....+.+|++++++++||||+++++++...... ...
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~-~~~ 92 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSG-DEF 92 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccC-CCC
Confidence 36788899999999999999995 4689999999875322 2245688999999999999999999987642211 112
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
...++|+||+.. +|..++. ..+++.....++.|+++||+|||+. +++||||||+||+++.++.+|++|||+
T Consensus 93 ~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~ 163 (342)
T cd07879 93 QDFYLVMPYMQT-DLQKIMG-----HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFGL 163 (342)
T ss_pred ceEEEEeccccc-CHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCCC
Confidence 457999999974 7877653 2488999999999999999999997 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccc---
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESAR--- 708 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~--- 708 (786)
++..... .....++..|+|||.... ..++.++|||||||++|||++|+.||...+.......+...........
T Consensus 164 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (342)
T cd07879 164 ARHADAE--MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQK 241 (342)
T ss_pred CcCCCCC--CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 8654321 122334567899998765 4588999999999999999999999976543221111111100000000
Q ss_pred ------ccccc--cccccc----CcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 709 ------RSMVD--PAVNKA----CLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 709 ------~~~~d--~~~~~~----~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
....+ +..... ........+.+++.+||+.||++||+++|++.|.||...
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~ 303 (342)
T cd07879 242 LEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSF 303 (342)
T ss_pred hcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhc
Confidence 00000 000000 000122356788999999999999999999999998764
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-34 Score=294.46 Aligned_cols=252 Identities=21% Similarity=0.418 Sum_probs=201.0
Q ss_pred CCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEE
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~ 556 (786)
+|+..+.||+|++|.||+|... ++..|++|++........+.+.+|++++++++|+||+++++++.. ....+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------~~~~~ 73 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLK-------KDELW 73 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEec-------CCeEE
Confidence 4677889999999999999975 689999999987654456789999999999999999999998765 35689
Q ss_pred EEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccc
Q 003926 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636 (786)
Q Consensus 557 LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~ 636 (786)
+++||+++++|.+++.... ..+++..+..++.+++.|+.|||+. +++||||+|+||++++++.+||+|||.+...
T Consensus 74 l~~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~ 148 (253)
T cd05122 74 IVMEFCSGGSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQL 148 (253)
T ss_pred EEEecCCCCcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeeccccccc
Confidence 9999999999999987632 4689999999999999999999997 9999999999999999999999999998655
Q ss_pred ccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccc
Q 003926 637 ENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAV 716 (786)
Q Consensus 637 ~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 716 (786)
..........++..|++||......++.++||||||+++|||++|+.|+...+.......... . ......++
T Consensus 149 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---~---~~~~~~~~-- 220 (253)
T cd05122 149 SDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIAT---N---GPPGLRNP-- 220 (253)
T ss_pred cccccccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh---c---CCCCcCcc--
Confidence 433212334456789999998888899999999999999999999999876532221111110 0 01111111
Q ss_pred cccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 717 NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 717 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
......+.+++.+||+.||++|||+.|+++|+|
T Consensus 221 -----~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 221 -----EKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred -----cccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 001235678888999999999999999998754
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-34 Score=305.89 Aligned_cols=274 Identities=15% Similarity=0.261 Sum_probs=198.1
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeecccc-CCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFD-DSS 551 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~-~~~ 551 (786)
.++|+..+.||+|+||.||+|... +++.||||++..... .....+.+|++++++++||||++++++|...... ...
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 346888899999999999999965 689999999865432 2234567899999999999999999998653221 122
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
....++||||+++ +|.+++.... ..+++.+...++.|++.||+|||+. +++|+||||+||+++.++.+||+|||
T Consensus 91 ~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg 164 (310)
T cd07865 91 KGSFYLVFEFCEH-DLAGLLSNKN--VKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADFG 164 (310)
T ss_pred CceEEEEEcCCCc-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcCC
Confidence 3467999999974 8888886532 3589999999999999999999997 99999999999999999999999999
Q ss_pred cccccccccc-----cccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcc
Q 003926 632 LPLLAENAEK-----VGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADE 705 (786)
Q Consensus 632 l~~~~~~~~~-----~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 705 (786)
++........ .....++..|+|||..... .++.++||||||+++|||+||++|+...........+........
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (310)
T cd07865 165 LARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSIT 244 (310)
T ss_pred CcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 9864432111 1122345678999987554 378899999999999999999999876544332222222111100
Q ss_pred cc-cccc-----ccc-cccccC---cH------HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 706 SA-RRSM-----VDP-AVNKAC---LD------ESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 706 ~~-~~~~-----~d~-~~~~~~---~~------~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
.. .... .+. ...... .. .....+.+++.+||+.||++|||++|+++|.||
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 245 PEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred hhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 00 0000 000 000000 00 012345689999999999999999999998774
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-34 Score=302.63 Aligned_cols=266 Identities=20% Similarity=0.338 Sum_probs=197.6
Q ss_pred CCccCccCCCCCceeEEEEec-CCcEEEEEEecccC--CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 479 FDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK--CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
|+..+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|++++++++|+|++++++++... ..+..
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~~ 75 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSK-----GKGSI 75 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecC-----CCCcE
Confidence 456788999999999999965 58999999998663 23346789999999999999999999998652 12568
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
++||||+++ +|.+++.... ..+++..+..++.|+++||+|||+. +++|+||||+||++++++.+|++|||++..
T Consensus 76 ~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~ 149 (287)
T cd07840 76 YMVFEYMDH-DLTGLLDSPE--VKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARP 149 (287)
T ss_pred EEEeccccc-cHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceee
Confidence 999999985 9999887532 3689999999999999999999997 999999999999999999999999999865
Q ss_pred ccccc--ccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHh-cccccccc
Q 003926 636 AENAE--KVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTA-DESARRSM 711 (786)
Q Consensus 636 ~~~~~--~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 711 (786)
..... ......++..|++||...+ ..++.++||||||+++|||+||++|+...........+...... ....+...
T Consensus 150 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (287)
T cd07840 150 YTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGV 229 (287)
T ss_pred ccCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhcccc
Confidence 43322 1122234567899997654 45789999999999999999999998765443222222211110 00000000
Q ss_pred cc--------c-----cccccCcHH-HHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 712 VD--------P-----AVNKACLDE-SLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 712 ~d--------~-----~~~~~~~~~-~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
.+ + ......... ....+.+++.+||+.+|.+||++.+++++.|+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 230 SKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred ccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 00 0 000000011 14567889999999999999999999988764
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-34 Score=304.52 Aligned_cols=274 Identities=18% Similarity=0.283 Sum_probs=199.8
Q ss_pred HHhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccc---
Q 003926 474 EATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYF--- 547 (786)
Q Consensus 474 ~~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~--- 547 (786)
...++|+..+.||+|+||.||+|..+ +|+.||||+++.... .....+.+|++++++++||||+++++++.+...
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 35677889999999999999999975 589999999975432 234568899999999999999999998865210
Q ss_pred cCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccc
Q 003926 548 DDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKI 627 (786)
Q Consensus 548 ~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl 627 (786)
........++|+||+++ ++.+.+... ...+++.....++.|++.||+|||+. +|+||||||+||++++++.+||
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~kl 157 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESG--LVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIKL 157 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEEe
Confidence 00012368999999986 777777643 23689999999999999999999997 9999999999999999999999
Q ss_pred cCCCccccccccc--ccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHH-h
Q 003926 628 SSYNLPLLAENAE--KVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVT-A 703 (786)
Q Consensus 628 ~DfGl~~~~~~~~--~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~-~ 703 (786)
+|||++....... .......+..|++||.... ..++.++|||||||++|||++|++|+...+.......+..... .
T Consensus 158 ~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~ 237 (302)
T cd07864 158 ADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSP 237 (302)
T ss_pred CcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence 9999986543222 1112233557899997654 3578899999999999999999999976543322222222211 1
Q ss_pred cccccccccc--------c------cccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 704 DESARRSMVD--------P------AVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 704 ~~~~~~~~~d--------~------~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
....++.+.. + .... ........+.+++.+||+.||++||++.||+.+.|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~ 301 (302)
T cd07864 238 CPAVWPDVIKLPYFNTMKPKKQYRRRLRE-EFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPW 301 (302)
T ss_pred Chhhcccccccccccccccccccccchhh-hcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 1111111100 0 0000 00112346778899999999999999999998865
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-34 Score=302.06 Aligned_cols=270 Identities=17% Similarity=0.294 Sum_probs=196.5
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
++|+..+.||+|++|.||+|..+ +|+.||+|.+..... ...+.+.+|++++++++|+||+++++++.. ..
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~ 74 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHS-------EK 74 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEec-------CC
Confidence 46788899999999999999965 689999999865432 234678899999999999999999998864 45
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC-CCcccccCCCc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ-NLVAKISSYNL 632 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~-~~~~kl~DfGl 632 (786)
..++||||++ ++|.+++.... ...+++.....++.|++.||+|||+. +++||||||+||+++. +..+||+|||+
T Consensus 75 ~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~ 149 (294)
T PLN00009 75 RLYLVFEYLD-LDLKKHMDSSP-DFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGL 149 (294)
T ss_pred eEEEEEeccc-ccHHHHHHhCC-CCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEccccc
Confidence 7899999996 58888876432 23467888889999999999999997 9999999999999985 56789999999
Q ss_pred ccccccc-cccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCchh-HHHHHHHHHHHHhcccccc
Q 003926 633 PLLAENA-EKVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVVTADESARR 709 (786)
Q Consensus 633 ~~~~~~~-~~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~ 709 (786)
+...... .......++..|++||.+... .++.++|||||||++|||+||++||..... +................+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (294)
T PLN00009 150 ARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWP 229 (294)
T ss_pred ccccCCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcc
Confidence 8644221 111222345678999987553 578999999999999999999999875433 2222211111000000000
Q ss_pred c---ccc-----ccccc----cCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 710 S---MVD-----PAVNK----ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 710 ~---~~d-----~~~~~----~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
. ..+ +.... .........+.+++.+|++.+|++||++.|+++|.||...
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~ 290 (294)
T PLN00009 230 GVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDL 290 (294)
T ss_pred ccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHH
Confidence 0 000 00000 0011122356788899999999999999999999998754
|
|
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-35 Score=312.03 Aligned_cols=251 Identities=21% Similarity=0.342 Sum_probs=195.9
Q ss_pred cCccCCCCCceeEEEEec-CCcEEEEEEec---ccC-CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEE
Q 003926 482 SAFMGEGSQGQMYRGRLK-NGTFVAIRCLK---MKK-CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (786)
Q Consensus 482 ~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~---~~~-~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~ 556 (786)
..+||+|+|=+||||... +|..||=-.++ ..+ ....+.|..|+.+|+.|+|||||+++.++.+ ......-
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d-----~~n~~in 119 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVD-----TDNKTIN 119 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheec-----CCCceee
Confidence 467999999999999854 58888732222 221 1234789999999999999999999998765 2235678
Q ss_pred EEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCC-CcccccCCCcccc
Q 003926 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN-LVAKISSYNLPLL 635 (786)
Q Consensus 557 LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~-~~~kl~DfGl~~~ 635 (786)
+|+|.|..|+|+.|+.+. ..++.......+.||.+||.|||+. .|+|||||||..||+++.+ |.+||+|.|||.+
T Consensus 120 ~iTEL~TSGtLr~Y~kk~---~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl 195 (632)
T KOG0584|consen 120 FITELFTSGTLREYRKKH---RRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATL 195 (632)
T ss_pred eeeecccCCcHHHHHHHh---ccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHH
Confidence 999999999999999863 4588888999999999999999995 6899999999999999866 7899999999977
Q ss_pred cccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCc-hhHHHHHHHHHHHHhccccccccccc
Q 003926 636 AENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRK-EVDLLKNQLQAVVTADESARRSMVDP 714 (786)
Q Consensus 636 ~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~ 714 (786)
...... ...+||+.+||||... ..|++.+||||||+.|+||+|+..|+... +...+.+.+.... .+.....+-||
T Consensus 196 ~r~s~a-ksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGi--KP~sl~kV~dP 271 (632)
T KOG0584|consen 196 LRKSHA-KSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGI--KPAALSKVKDP 271 (632)
T ss_pred hhcccc-ceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCC--CHHHhhccCCH
Confidence 754432 3478999999999764 78999999999999999999999998653 2323322222111 11112222333
Q ss_pred cccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 715 AVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 715 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
++.+++.+|+.. .++|||+.|+|.+.+|...
T Consensus 272 ------------evr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 272 ------------EVREFIEKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred ------------HHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence 345777899999 9999999999999998763
|
|
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-34 Score=296.17 Aligned_cols=254 Identities=20% Similarity=0.360 Sum_probs=201.1
Q ss_pred CCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
+|...+.||+|++|.||+|... ++..|++|++..... ...+.+.+|++++++++|+||+++++.+... ....
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~ 75 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDE-----EKNT 75 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecC-----CCCe
Confidence 3667789999999999999976 689999999876543 3356799999999999999999999988651 1256
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++|+||+++++|.+++.... .+++..+..++.++++|++|||+. +++|+|++|+||+++.++.+||+|||.+.
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~ 149 (260)
T cd06606 76 LNIFLEYVSGGSLSSLLKKFG---KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAK 149 (260)
T ss_pred EEEEEEecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEE
Confidence 899999999999999997632 689999999999999999999997 99999999999999999999999999986
Q ss_pred ccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 635 LAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 635 ~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
....... .....+...|++||......++.++||||||+++|||++|+.|+...+... . .+..... ....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~-~~~~~~~--~~~~--- 222 (260)
T cd06606 150 RLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPM-A-ALYKIGS--SGEP--- 222 (260)
T ss_pred ecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH-H-HHHhccc--cCCC---
Confidence 5543322 233445667899999888889999999999999999999999987654111 0 0100000 0000
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
+.+ +......+.+++.+|++.+|++||++.|++.|+|+
T Consensus 223 --~~~----~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 223 --PEI----PEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred --cCC----CcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 111 11223467788889999999999999999998763
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-34 Score=307.62 Aligned_cols=274 Identities=18% Similarity=0.254 Sum_probs=205.3
Q ss_pred CCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC--CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK--CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
+|+..+.||+|+||.||+|+.. ++..||||++.... ....+.+.+|++++++++|+||+++++++..... .....
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~--~~~~~ 78 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSP--EDFND 78 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCc--ccccc
Confidence 3677899999999999999965 58999999987643 2335679999999999999999999998865321 12346
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.|+||||++ ++|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.++|+|||++.
T Consensus 79 ~~lv~e~~~-~~l~~~l~~~---~~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~ 151 (330)
T cd07834 79 VYIVTELME-TDLHKVIKSP---QPLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLAR 151 (330)
T ss_pred eEEEecchh-hhHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceE
Confidence 899999998 5899998753 2689999999999999999999997 99999999999999999999999999986
Q ss_pred cccccc----ccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcc-ccc
Q 003926 635 LAENAE----KVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADE-SAR 708 (786)
Q Consensus 635 ~~~~~~----~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~-~~~ 708 (786)
...... ......++..|++||.+... .++.++||||||+++|||++|++||...........+........ ...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 231 (330)
T cd07834 152 GVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDL 231 (330)
T ss_pred eecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHh
Confidence 554332 12223456678999998777 789999999999999999999999976554332222211111000 000
Q ss_pred c--------ccc---ccccc---ccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 003926 709 R--------SMV---DPAVN---KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760 (786)
Q Consensus 709 ~--------~~~---d~~~~---~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~ 760 (786)
. ..+ ..... ..........+.+++.+||+.+|++||++.+++.|+||.....
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~ 297 (330)
T cd07834 232 KFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD 297 (330)
T ss_pred hhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence 0 000 00000 0001112346778999999999999999999999999886433
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-35 Score=299.20 Aligned_cols=269 Identities=18% Similarity=0.281 Sum_probs=212.0
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
-+.|..-++||+||||.||-++.+ +|..+|.|++.+... ....-.++|-+++.+++.+.||.+- |.++ +
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVsla-YAfe------T 256 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLA-YAFE------T 256 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEe-eeec------C
Confidence 456788899999999999999854 799999999875532 3344578899999999999999864 3332 3
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
.+.+|+|+..|.||||.-+|.+.. ...++....+.+|.+|+-||++||+. .||.||+||+|||+|+.|+++|+|.|
T Consensus 257 kd~LClVLtlMNGGDLkfHiyn~g-~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLG 332 (591)
T KOG0986|consen 257 KDALCLVLTLMNGGDLKFHIYNHG-NPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLG 332 (591)
T ss_pred CCceEEEEEeecCCceeEEeeccC-CCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccc
Confidence 678999999999999999987643 35799999999999999999999998 99999999999999999999999999
Q ss_pred cccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 632 LPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 632 l~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
+|.............||.+|||||++..+.|+...|+||+||++|||+.|+.||.......-.+-+......
T Consensus 333 LAvei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~-------- 404 (591)
T KOG0986|consen 333 LAVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLE-------- 404 (591)
T ss_pred eEEecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhc--------
Confidence 998887777777778999999999999999999999999999999999999999643221111112111111
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHHHHHHHHhhhhhccCC
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERP-----SVEDVLWNLQFAAQVQDAWHSQS 767 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~~l~~~~~~~~~~~~~~ 767 (786)
|+. ..++....+..+++...|++||++|- .++||-+|++|........+...
T Consensus 405 -~~~---ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~rleagm 461 (591)
T KOG0986|consen 405 -DPE---EYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWRRLEAGM 461 (591)
T ss_pred -chh---hcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCHhHHhccC
Confidence 111 11223334555677788999999995 57799999999875444434333
|
|
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-34 Score=308.11 Aligned_cols=268 Identities=22% Similarity=0.323 Sum_probs=194.0
Q ss_pred CCccCccCCCCCceeEEEEec---CCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 479 FDTSAFMGEGSQGQMYRGRLK---NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
|+..+.||+|+||.||+|... ++..||+|.+.... ....+.+.+|++++++++||||+++++++... ..
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~ 76 (316)
T cd07842 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEH-----AD 76 (316)
T ss_pred ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCC-----CC
Confidence 667788999999999999964 47899999998643 33456788999999999999999999988651 23
Q ss_pred ceEEEEEecCCCCChhHHhhcCC--CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC----CCccc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGH--AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ----NLVAK 626 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~--~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~----~~~~k 626 (786)
...++||||+++ +|.+++.... ....++......++.|++.||+|||+. +|+||||||+||+++. ++.+|
T Consensus 77 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~k 152 (316)
T cd07842 77 KSVYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVK 152 (316)
T ss_pred ceEEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEE
Confidence 578999999985 7777765321 123688889999999999999999997 9999999999999999 99999
Q ss_pred ccCCCcccccccccc----cccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHH---------
Q 003926 627 ISSYNLPLLAENAEK----VGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL--------- 692 (786)
Q Consensus 627 l~DfGl~~~~~~~~~----~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~--------- 692 (786)
|+|||++........ .....++..|+|||.... ..++.++|||||||++|||++|++||.......
T Consensus 153 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 232 (316)
T cd07842 153 IGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRD 232 (316)
T ss_pred ECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHH
Confidence 999999865432211 112345667899998755 357899999999999999999999986433211
Q ss_pred -HHHHHHHHHHhccc---------cccc----cccccccccCcH-------HHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 003926 693 -LKNQLQAVVTADES---------ARRS----MVDPAVNKACLD-------ESLKTMMEVCVRCLLKNPAERPSVEDVLW 751 (786)
Q Consensus 693 -~~~~~~~~~~~~~~---------~~~~----~~d~~~~~~~~~-------~~~~~~~~l~~~Cl~~dP~~RPt~~evl~ 751 (786)
+...+......... .... ............ .....+.+++.+|++.||++|||+.|++.
T Consensus 233 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 233 QLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 11111100000000 0000 000000000000 12245778999999999999999999999
Q ss_pred HHHH
Q 003926 752 NLQF 755 (786)
Q Consensus 752 ~l~~ 755 (786)
|+||
T Consensus 313 ~~~f 316 (316)
T cd07842 313 HPYF 316 (316)
T ss_pred CCCC
Confidence 8774
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-34 Score=309.01 Aligned_cols=281 Identities=16% Similarity=0.225 Sum_probs=205.9
Q ss_pred ccCHHHHHHHhcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeee
Q 003926 466 TFSLEELEEATNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHC 542 (786)
Q Consensus 466 ~~~~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~ 542 (786)
.....++...+++|...+.||+|+||.||+|.. .+|+.||+|+++.... ...+.+.+|++++++++||||+++++++
T Consensus 6 ~~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~ 85 (345)
T cd07877 6 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVF 85 (345)
T ss_pred hhHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeee
Confidence 344567778889999999999999999999985 5789999999875432 2245688999999999999999999987
Q ss_pred eeccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCC
Q 003926 543 FECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN 622 (786)
Q Consensus 543 ~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~ 622 (786)
...... ......++++||+ +++|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+||+++++
T Consensus 86 ~~~~~~-~~~~~~~lv~~~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~ 156 (345)
T cd07877 86 TPARSL-EEFNDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNED 156 (345)
T ss_pred eecccc-cccccEEEEehhc-ccCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCC
Confidence 532111 1123478888887 7899988864 2489999999999999999999997 99999999999999999
Q ss_pred CcccccCCCcccccccccccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHH-HHHHHHHH
Q 003926 623 LVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL-LKNQLQAV 700 (786)
Q Consensus 623 ~~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~-~~~~~~~~ 700 (786)
+.+||+|||++...... .....++..|+|||.... ..++.++|||||||++|||++|++||....... ........
T Consensus 157 ~~~kl~dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 234 (345)
T cd07877 157 CELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 234 (345)
T ss_pred CCEEEeccccccccccc--ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 99999999998654322 122345667899998755 468899999999999999999999986543322 11111111
Q ss_pred HHhcccccccccc----------ccccccCc----HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 701 VTADESARRSMVD----------PAVNKACL----DESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 701 ~~~~~~~~~~~~d----------~~~~~~~~----~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
..........+.+ +....... ......+.+++.+|++.||.+||++.|++.|.||.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~ 305 (345)
T cd07877 235 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 305 (345)
T ss_pred CCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhh
Confidence 0000000000000 00000000 011335678889999999999999999999999875
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-34 Score=298.83 Aligned_cols=254 Identities=17% Similarity=0.241 Sum_probs=190.2
Q ss_pred ccCCCCCceeEEEEe-cCCcEEEEEEecccCCC---ChHHHHHHHH---HHhcCCCCCcceeeeeeeeccccCCCCceEE
Q 003926 484 FMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCH---STRNFMHHIE---LISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (786)
Q Consensus 484 ~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~---~~~~f~~E~~---~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~ 556 (786)
.||+|+||.||+|+. .+++.||+|.+...... ....+..|.. .++...||||+++.+++.. .+..+
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~~~~ 73 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT-------PDKLS 73 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeec-------CCEEE
Confidence 489999999999985 46899999998754322 1223445543 4445689999999887764 45689
Q ss_pred EEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccc
Q 003926 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636 (786)
Q Consensus 557 LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~ 636 (786)
+||||+++|+|.+++... ..+++..+..++.|+++|++|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 74 ~v~e~~~g~~L~~~l~~~---~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~ 147 (278)
T cd05606 74 FILDLMNGGDLHYHLSQH---GVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDF 147 (278)
T ss_pred EEEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCcccc
Confidence 999999999999998653 3589999999999999999999997 8999999999999999999999999998644
Q ss_pred ccccccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccccccc
Q 003926 637 ENAEKVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPA 715 (786)
Q Consensus 637 ~~~~~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 715 (786)
.... .....++..|++||....+ .++.++|||||||++|||++|+.||............... .. .++.
T Consensus 148 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~-~~--------~~~~ 217 (278)
T cd05606 148 SKKK-PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT-LT--------MAVE 217 (278)
T ss_pred CccC-CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHh-hc--------cCCC
Confidence 3221 1233567789999998654 5899999999999999999999998754221111111000 00 0111
Q ss_pred ccccCcHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHHHHHHHHhhhhhccCC
Q 003926 716 VNKACLDESLKTMMEVCVRCLLKNPAERP-----SVEDVLWNLQFAAQVQDAWHSQS 767 (786)
Q Consensus 716 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~~l~~~~~~~~~~~~~~ 767 (786)
.... ....+.+++.+|+..+|++|| ++.|+++|+|+... .|....
T Consensus 218 ~~~~----~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~---~~~~~~ 267 (278)
T cd05606 218 LPDS----FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSL---DWQMVF 267 (278)
T ss_pred CCCc----CCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCC---CchHhh
Confidence 1111 124566788899999999999 99999999998763 354443
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=300.28 Aligned_cols=257 Identities=16% Similarity=0.294 Sum_probs=193.9
Q ss_pred cCCCccCccCCCCCceeEEEEecC-CcEEEEEEecccCCC-ChHHHHHHHHHHhcCC-CCCcceeeeeeeeccccCCCCc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKN-GTFVAIRCLKMKKCH-STRNFMHHIELISKLR-HRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~-H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
++|+..+.||+|+||.||+|..++ ++.||||+++..... ...++.+|+.++.+.+ |+||++++|+|.. ..
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~-------~~ 87 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFIT-------DS 87 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeec-------CC
Confidence 567778999999999999999764 899999999754332 3456778888777775 9999999999875 35
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..|+||||++ +++.+++.... ..+++..+..++.++++||+|||+. .+|+||||+|+||++++++.+||+|||++
T Consensus 88 ~~~~v~e~~~-~~l~~l~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~--~~i~H~dl~p~nill~~~~~~kL~dfg~~ 162 (296)
T cd06618 88 DVFICMELMS-TCLDKLLKRIQ--GPIPEDILGKMTVAIVKALHYLKEK--HGVIHRDVKPSNILLDASGNVKLCDFGIS 162 (296)
T ss_pred eEEEEeeccC-cCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhh--CCEecCCCcHHHEEEcCCCCEEECccccc
Confidence 6899999986 47777765422 3689999999999999999999973 28999999999999999999999999998
Q ss_pred cccccccccccccccccccCccccccCC----CCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 634 LLAENAEKVGHVIPYSGSIDPTNSARGK----LEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~aPe~~~~~~----~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
.............++..|+|||.+.... ++.++||||||+++|||++|+.||...... ...+....... ..
T Consensus 163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~~~~~~~~~---~~ 237 (296)
T cd06618 163 GRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE--FEVLTKILQEE---PP 237 (296)
T ss_pred hhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH--HHHHHHHhcCC---CC
Confidence 6543322222233456789999876543 789999999999999999999998653221 11111111111 00
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
..... . .....+.+++.+||+.||++||++.++++|.|+..
T Consensus 238 ~~~~~---~----~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 278 (296)
T cd06618 238 SLPPN---E----GFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRR 278 (296)
T ss_pred CCCCC---C----CCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhc
Confidence 00000 0 11235678888999999999999999999998765
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-34 Score=300.13 Aligned_cols=264 Identities=21% Similarity=0.329 Sum_probs=198.3
Q ss_pred CCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 479 FDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
|+..+.||+|++|.||+|... +|+.+|+|+++..... ....+.+|++++++++|+||+++++++.. .+..
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------~~~~ 73 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRH-------KGDL 73 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhcc-------CCCE
Confidence 456688999999999999864 6899999998765432 34678899999999999999999998764 3568
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
++||||+++ +|.+++.... ..+++..+..++.+++.||.|||+. +|+|+||||+||+++.++.+||+|||.+..
T Consensus 74 ~~v~e~~~~-~l~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~ 147 (283)
T cd05118 74 YLVFEFMDT-DLYKLIKDRQ--RGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARS 147 (283)
T ss_pred EEEEeccCC-CHHHHHHhhc--ccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEe
Confidence 999999985 8988887532 4689999999999999999999997 999999999999999999999999999855
Q ss_pred ccccc-ccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCchhHH-HHHHHHHHHHhccccccccc
Q 003926 636 AENAE-KVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL-LKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 636 ~~~~~-~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 712 (786)
..... ......+...|++||..... .++.++||||||+++|||+||++||...+... ...............+....
T Consensus 148 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (283)
T cd05118 148 FGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFT 227 (283)
T ss_pred cCCCcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccch
Confidence 53322 12223455678999987766 68999999999999999999999987654322 22211111000000000000
Q ss_pred c---------c----cccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 713 D---------P----AVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 713 d---------~----~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
+ + .............+.+++.+||+.||.+||++.|++.|+|+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 228 SLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred hhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 0 0 00001112334577899999999999999999999988763
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-34 Score=327.30 Aligned_cols=259 Identities=21% Similarity=0.379 Sum_probs=201.2
Q ss_pred HHHHhcCCCccCccCCCCCceeEEEEec----C----CcEEEEEEecccCCC-ChHHHHHHHHHHhcC-CCCCcceeeee
Q 003926 472 LEEATNNFDTSAFMGEGSQGQMYRGRLK----N----GTFVAIRCLKMKKCH-STRNFMHHIELISKL-RHRHLVSALGH 541 (786)
Q Consensus 472 l~~~~~~f~~~~~iG~G~fg~Vy~~~~~----~----g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l-~H~NIv~l~g~ 541 (786)
++...++....+.+|+|.||.|++|... . ...||||.++..... ..+.+..|+++|+.+ +|+|||.++|+
T Consensus 291 ~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~ 370 (609)
T KOG0200|consen 291 WEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGA 370 (609)
T ss_pred eeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheee
Confidence 3444555556679999999999999853 1 457999999865433 457899999999999 59999999999
Q ss_pred eeeccccCCCCceEEEEEecCCCCChhHHhhcCC-------C----C--CCCCHHHHHHHHHHHHHHhhhhhcCCCCCcc
Q 003926 542 CFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGH-------A----H--QSLTWTQRISAAIGVAKGIQFLHTGIVPGVF 608 (786)
Q Consensus 542 ~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~-------~----~--~~l~~~~~~~ia~~ia~gL~yLH~~~~~~iv 608 (786)
|.. .+..++|+||++.|+|.++++..+ . . ..++....+.++.|||.||+||++. ++|
T Consensus 371 ~t~-------~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~v 440 (609)
T KOG0200|consen 371 CTQ-------DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCV 440 (609)
T ss_pred ecc-------CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---Ccc
Confidence 975 456899999999999999998654 0 0 2388899999999999999999997 899
Q ss_pred ccCCCCCceeecCCCcccccCCCcccccccccccc--ccc--ccccccCccccccCCCCcccceeehhHHHHHHHh-CCC
Q 003926 609 SNNLKITDILLDQNLVAKISSYNLPLLAENAEKVG--HVI--PYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRP 683 (786)
Q Consensus 609 Hrdlk~~NILld~~~~~kl~DfGl~~~~~~~~~~~--~~~--~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~ 683 (786)
||||.++|||+.++..+||+|||+++.......+. ... -...|||||.+....|+.|+|||||||+||||+| |..
T Consensus 441 HRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~ 520 (609)
T KOG0200|consen 441 HRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGT 520 (609)
T ss_pred chhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCC
Confidence 99999999999999999999999997543332221 111 2346999999998999999999999999999999 788
Q ss_pred CCCCch-hHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 684 LKSRKE-VDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 684 p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
|+.+.. ...+.+.+... .. ...+..| ..++.+++..||+.+|++||++.|+++.+.-
T Consensus 521 PYp~~~~~~~l~~~l~~G--------~r---~~~P~~c----~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~ 578 (609)
T KOG0200|consen 521 PYPGIPPTEELLEFLKEG--------NR---MEQPEHC----SDEIYDLMKSCWNADPEDRPTFSECVEFFEK 578 (609)
T ss_pred CCCCCCcHHHHHHHHhcC--------CC---CCCCCCC----CHHHHHHHHHHhCCCcccCCCHHHHHHHHHH
Confidence 887532 22222222111 01 1112223 3456688889999999999999999987764
|
|
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-34 Score=290.46 Aligned_cols=254 Identities=19% Similarity=0.271 Sum_probs=201.7
Q ss_pred CCccCccCCCCCceeEEEEecC-CcEEEEEEecccCCCC---hHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 479 FDTSAFMGEGSQGQMYRGRLKN-GTFVAIRCLKMKKCHS---TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~~---~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
|+..+.||.|.-|+||.++.++ +..+|+|++.+..... ......|-+||+.+.||-+..|++.+.. ...
T Consensus 79 f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet-------~~~ 151 (459)
T KOG0610|consen 79 FRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFET-------DKY 151 (459)
T ss_pred HHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeec-------cce
Confidence 4456889999999999999764 6899999998764332 3456778999999999999999998764 567
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.|+|||||+||+|....+++. ...++......+|.+|.-||+|||-. |||.|||||+|||+-++|++-++||.|+.
T Consensus 152 ~cl~meyCpGGdL~~LrqkQp-~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~ 227 (459)
T KOG0610|consen 152 SCLVMEYCPGGDLHSLRQKQP-GKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSL 227 (459)
T ss_pred eEEEEecCCCccHHHHHhhCC-CCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccc
Confidence 899999999999999988754 45688888899999999999999997 99999999999999999999999999963
Q ss_pred ccc-------c--------------------------c-c-----------------------ccccccccccccCcccc
Q 003926 635 LAE-------N--------------------------A-E-----------------------KVGHVIPYSGSIDPTNS 657 (786)
Q Consensus 635 ~~~-------~--------------------------~-~-----------------------~~~~~~~~~~~~aPe~~ 657 (786)
... . . . .+....||-.|+|||++
T Consensus 228 ~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI 307 (459)
T KOG0610|consen 228 RCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVI 307 (459)
T ss_pred cCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceee
Confidence 210 0 0 0 00112456679999999
Q ss_pred ccCCCCcccceeehhHHHHHHHhCCCCCCCchhH-HHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhc
Q 003926 658 ARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVD-LLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCL 736 (786)
Q Consensus 658 ~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl 736 (786)
.+..-+.++|+|+|||++|||+.|+.||.+.+.. .+.+++.. . +..+. ..+....+.+++.+.|
T Consensus 308 ~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~----~---------l~Fp~--~~~vs~~akDLIr~LL 372 (459)
T KOG0610|consen 308 RGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQ----P---------LKFPE--EPEVSSAAKDLIRKLL 372 (459)
T ss_pred ecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcC----C---------CcCCC--CCcchhHHHHHHHHHh
Confidence 9988999999999999999999999999875433 33332211 1 11111 1133456778999999
Q ss_pred cCCCCCCCC----HHHHHHHHHHHHH
Q 003926 737 LKNPAERPS----VEDVLWNLQFAAQ 758 (786)
Q Consensus 737 ~~dP~~RPt----~~evl~~l~~~~~ 758 (786)
.+||.+|-- +.||-+|++|...
T Consensus 373 vKdP~kRlg~~rGA~eIK~HpFF~gV 398 (459)
T KOG0610|consen 373 VKDPSKRLGSKRGAAEIKRHPFFEGV 398 (459)
T ss_pred ccChhhhhccccchHHhhcCccccCC
Confidence 999999988 9999999998864
|
|
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-33 Score=292.47 Aligned_cols=247 Identities=17% Similarity=0.241 Sum_probs=188.6
Q ss_pred CccCCCCCceeEEEEec-CCcEEEEEEecccCCC---ChHHHHHHHHH-HhcCCCCCcceeeeeeeeccccCCCCceEEE
Q 003926 483 AFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH---STRNFMHHIEL-ISKLRHRHLVSALGHCFECYFDDSSVSRIFL 557 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~---~~~~f~~E~~~-l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~L 557 (786)
+.||+|+||.||+|... +|+.||||.+...... ....+..|..+ ....+|+||+++++++.. .+..++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~-------~~~~~l 74 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQS-------KDYLYL 74 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEc-------CCeEEE
Confidence 46899999999999864 6899999998754321 12344555554 445689999999998864 457899
Q ss_pred EEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccc
Q 003926 558 IFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637 (786)
Q Consensus 558 V~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~ 637 (786)
||||+++|+|.+++... ..+++.....++.|++.||.|||+. +++||||+|+||++++++.+||+|||++....
T Consensus 75 v~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 148 (260)
T cd05611 75 VMEYLNGGDCASLIKTL---GGLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGL 148 (260)
T ss_pred EEeccCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceecc
Confidence 99999999999999753 3578888999999999999999997 99999999999999999999999999986443
Q ss_pred cccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccccccccc
Q 003926 638 NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVN 717 (786)
Q Consensus 638 ~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 717 (786)
.. ....++..|++||......++.++||||||+++|||+||++|+...........+. .... . ..+...
T Consensus 149 ~~---~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~---~~~~-~----~~~~~~ 217 (260)
T cd05611 149 EN---KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNIL---SRRI-N----WPEEVK 217 (260)
T ss_pred cc---ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH---hccc-C----CCCccc
Confidence 21 22345567899999887778999999999999999999999997654433222111 1000 0 011111
Q ss_pred ccCcHHHHHHHHHHHHHhccCCCCCCCCH---HHHHHHHHHHH
Q 003926 718 KACLDESLKTMMEVCVRCLLKNPAERPSV---EDVLWNLQFAA 757 (786)
Q Consensus 718 ~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~---~evl~~l~~~~ 757 (786)
......+.+++.+||+.+|++||++ .|++.|+|+..
T Consensus 218 ----~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~ 256 (260)
T cd05611 218 ----EFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKS 256 (260)
T ss_pred ----ccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhc
Confidence 1123456788899999999999955 79999998864
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-33 Score=293.67 Aligned_cols=252 Identities=13% Similarity=0.180 Sum_probs=190.7
Q ss_pred HHHHHHhcCCCccCcc--CCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcC-CCCCcceeeeeeeec
Q 003926 470 EELEEATNNFDTSAFM--GEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKL-RHRHLVSALGHCFEC 545 (786)
Q Consensus 470 ~~l~~~~~~f~~~~~i--G~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~ 545 (786)
.+.....++|+..+.+ |+|+||.||+++. .++..+|+|.+........ |+.....+ +||||+++++++..
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~- 80 (267)
T PHA03390 7 SELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTT- 80 (267)
T ss_pred HHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEec-
Confidence 3444455667776766 9999999999985 4688999999875432211 22222222 79999999998865
Q ss_pred cccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC-c
Q 003926 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL-V 624 (786)
Q Consensus 546 ~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~-~ 624 (786)
.+..++||||+++|+|.+++... ..++|.+...++.|+++|+.|||+. +++||||||+||+++.++ .
T Consensus 81 ------~~~~~iv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~ 148 (267)
T PHA03390 81 ------LKGHVLIMDYIKDGDLFDLLKKE---GKLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDR 148 (267)
T ss_pred ------CCeeEEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCe
Confidence 35689999999999999999763 2689999999999999999999997 899999999999999998 9
Q ss_pred ccccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHH--HHHHHHHHH
Q 003926 625 AKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLL--KNQLQAVVT 702 (786)
Q Consensus 625 ~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~--~~~~~~~~~ 702 (786)
++|+|||++...... ....++..|+|||......++.++|||||||++|||++|+.||........ ..+.... .
T Consensus 149 ~~l~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~ 224 (267)
T PHA03390 149 IYLCDYGLCKIIGTP---SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-Q 224 (267)
T ss_pred EEEecCccceecCCC---ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-c
Confidence 999999998654322 123456789999999888899999999999999999999999875432221 1111110 0
Q ss_pred hccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCC-HHHHHHHHHHH
Q 003926 703 ADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPS-VEDVLWNLQFA 756 (786)
Q Consensus 703 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt-~~evl~~l~~~ 756 (786)
. . .. ........+.+++.+||+.+|.+||+ ++|+++|.|+.
T Consensus 225 -~-----~---~~----~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~ 266 (267)
T PHA03390 225 -K-----K---LP----FIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLK 266 (267)
T ss_pred -c-----c---CC----cccccCHHHHHHHHHHhccChhhCCchHHHHhcCCccc
Confidence 0 0 00 11122345677888999999999996 69999998864
|
|
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-33 Score=301.11 Aligned_cols=264 Identities=15% Similarity=0.200 Sum_probs=189.1
Q ss_pred CccCCCCCceeEEEEecCCcEEEEEEecccC--CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEEEEe
Q 003926 483 AFMGEGSQGQMYRGRLKNGTFVAIRCLKMKK--CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFE 560 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV~E 560 (786)
+.+|.|+++.||++.. +++.||||++.... ....+.+.+|++++++++|+||+++++++.. .+..+++||
T Consensus 8 ~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~-------~~~~~~~~e 79 (314)
T cd08216 8 KCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIV-------DSELYVVSP 79 (314)
T ss_pred HhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeec-------CCeEEEEEe
Confidence 4445555555555554 68999999987542 2334679999999999999999999998764 456899999
Q ss_pred cCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccccccc
Q 003926 561 YVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE 640 (786)
Q Consensus 561 y~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~ 640 (786)
|+++|+|.+++.... ...+++.....++.|++.||+|||+. +|+||||||+||+++.++.+|++|||.+.......
T Consensus 80 ~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~ 155 (314)
T cd08216 80 LMAYGSCEDLLKTHF-PEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHG 155 (314)
T ss_pred ccCCCCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeecccc
Confidence 999999999997532 23578888899999999999999997 99999999999999999999999999875332111
Q ss_pred c--------cccccccccccCcccccc--CCCCcccceeehhHHHHHHHhCCCCCCCchhHH-HHHHHHHHHH-------
Q 003926 641 K--------VGHVIPYSGSIDPTNSAR--GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL-LKNQLQAVVT------- 702 (786)
Q Consensus 641 ~--------~~~~~~~~~~~aPe~~~~--~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~-~~~~~~~~~~------- 702 (786)
. .....++..|+|||.+.. ..++.++|||||||++|||++|+.||....... ..........
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (314)
T cd08216 156 KRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKST 235 (314)
T ss_pred ccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCc
Confidence 1 112234457899998765 358899999999999999999999997543211 1111110000
Q ss_pred --hccccccc----ccccccc----ccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 703 --ADESARRS----MVDPAVN----KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 703 --~~~~~~~~----~~d~~~~----~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
........ ..++... ..........+.+++.+||+.||++|||++|+++|+|+.+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~ 301 (314)
T cd08216 236 YPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQC 301 (314)
T ss_pred hhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhh
Confidence 00000000 0000000 01111223467788999999999999999999999998754
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-33 Score=293.01 Aligned_cols=252 Identities=17% Similarity=0.271 Sum_probs=193.9
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCC-----CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC-----HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~-----~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
.+|+..+.||+|+||.||+|+. .++..||+|.+..... .....|.+|++++++++|+||+++++++...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~----- 76 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDP----- 76 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcC-----
Confidence 4688899999999999999985 4689999998753211 2235788999999999999999999987541
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
.....++|+||+++++|.+++... ..+++.....++.|++.||.|||+. +++||||||+||+++.++.++|+||
T Consensus 77 ~~~~~~~v~e~~~~~~L~~~~~~~---~~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~df 150 (264)
T cd06653 77 EEKKLSIFVEYMPGGSIKDQLKAY---GALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDF 150 (264)
T ss_pred CCCEEEEEEEeCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcc
Confidence 234578999999999999998753 2478888999999999999999987 9999999999999999999999999
Q ss_pred Ccccccccc----cccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccc
Q 003926 631 NLPLLAENA----EKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADES 706 (786)
Q Consensus 631 Gl~~~~~~~----~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (786)
|+++..... .......++..|++||......++.++|||||||++|||++|++||........ ..+.. ..
T Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~~~-~~--- 224 (264)
T cd06653 151 GASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAA--IFKIA-TQ--- 224 (264)
T ss_pred ccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHH--HHHHH-cC---
Confidence 998644221 111123456779999998888889999999999999999999999975432211 11111 00
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
... +.+ +......+.+++.+||+ +|.+||+..+++.|++
T Consensus 225 ~~~----~~~----p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~ 263 (264)
T cd06653 225 PTK----PML----PDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPF 263 (264)
T ss_pred CCC----CCC----CcccCHHHHHHHHHHhc-CcccCccHHHHhcCCC
Confidence 011 111 12222456678889999 5799999999998764
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=295.73 Aligned_cols=245 Identities=18% Similarity=0.325 Sum_probs=193.7
Q ss_pred cCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEEEEe
Q 003926 485 MGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFE 560 (786)
Q Consensus 485 iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV~E 560 (786)
||+|+||.||+|+.. +|+.||+|.+..... ...+.+.+|++++++++|+||+++++.+.. ....|+|||
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-------~~~~~lv~e 73 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQG-------KKNLYLVME 73 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheec-------CcEEEEEEe
Confidence 689999999999976 499999999875543 234678999999999999999999987654 456899999
Q ss_pred cCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccccccc
Q 003926 561 YVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE 640 (786)
Q Consensus 561 y~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~ 640 (786)
|+++|+|.+++.... .+++..+..++.|++.||+|||+. +++||||+|+||++++++.+|++|||++.......
T Consensus 74 ~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~ 147 (265)
T cd05579 74 YLPGGDLASLLENVG---SLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRR 147 (265)
T ss_pred cCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCc
Confidence 999999999997632 689999999999999999999987 99999999999999999999999999975432221
Q ss_pred ---------ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 641 ---------KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 641 ---------~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
......+...|++||......++.++||||||+++|||++|+.|+...........+.. ..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~----~~------ 217 (265)
T cd05579 148 QINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILN----GK------ 217 (265)
T ss_pred ccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc----CC------
Confidence 11223345678999998888889999999999999999999999976554332222111 00
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCH---HHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSV---EDVLWNLQFA 756 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~---~evl~~l~~~ 756 (786)
... ...+ .....+.+++.+||+.+|++|||+ .|++++.||.
T Consensus 218 ~~~--~~~~--~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~ 261 (265)
T cd05579 218 IEW--PEDV--EVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFK 261 (265)
T ss_pred cCC--Cccc--cCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCcccc
Confidence 000 0000 013456788889999999999999 8888888875
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=297.56 Aligned_cols=264 Identities=20% Similarity=0.332 Sum_probs=197.8
Q ss_pred CCccCccCCCCCceeEEEEec-CCcEEEEEEecccC--CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 479 FDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK--CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
|+..+.||+|+||.||+|+.. +++.||+|.+.... ....+.+.+|++++++++|+||+++++++.. .+..
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-------~~~~ 73 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHT-------ERKL 73 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhc-------CCce
Confidence 455678999999999999965 59999999998653 2334678899999999999999999998765 3568
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
++||||++ ++|.+++.... ..+++..+..++.++++||+|||+. +|+||||+|+||++++++.+||+|||++..
T Consensus 74 ~~v~e~~~-~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~ 147 (282)
T cd07829 74 YLVFEYCD-MDLKKYLDKRP--GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARA 147 (282)
T ss_pred EEEecCcC-cCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccc
Confidence 99999998 59999998642 3689999999999999999999997 999999999999999999999999999865
Q ss_pred ccccc-ccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHH-hcccccc---
Q 003926 636 AENAE-KVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVT-ADESARR--- 709 (786)
Q Consensus 636 ~~~~~-~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~-~~~~~~~--- 709 (786)
..... ..........|+|||..... .++.++|||||||++|||++|++|+...........+..... ..+..+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (282)
T cd07829 148 FGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVT 227 (282)
T ss_pred cCCCccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhc
Confidence 43222 12222344568999987665 789999999999999999999999876543222211111110 0000000
Q ss_pred cc--cc---ccccc----cCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 710 SM--VD---PAVNK----ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 710 ~~--~d---~~~~~----~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
.+ .+ +.... .........+.+++.+||+.+|++||++.||+.|+||
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 228 KLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred ccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 00 00 00000 0011123467889999999999999999999998874
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=291.68 Aligned_cols=251 Identities=19% Similarity=0.296 Sum_probs=200.2
Q ss_pred CCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
+|+..+.||+|+||.||++..+ +++.+|+|.+..... ....++.+|++++++++|+||+++++++.. ...
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------~~~ 73 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLD-------GNK 73 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhcc-------CCE
Confidence 4677889999999999999854 688999999875432 234578899999999999999999988764 356
Q ss_pred EEEEEecCCCCChhHHhhcCC-CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 555 IFLIFEYVPNGTLRSWISEGH-AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
.++||||+++++|.+++.+.. ....+++.....++.+++.||+|||+. +++|+||+|+||++++++.+|++|||++
T Consensus 74 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~ 150 (256)
T cd08530 74 LCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGIS 150 (256)
T ss_pred EEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccch
Confidence 899999999999999986522 124689999999999999999999997 9999999999999999999999999998
Q ss_pred cccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccccc
Q 003926 634 LLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVD 713 (786)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 713 (786)
...... ......+...|++||......++.++|+||||+++|||++|+.|+...+.......+. .. ...
T Consensus 151 ~~~~~~-~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~---~~---~~~---- 219 (256)
T cd08530 151 KVLKKN-MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQ---RG---KYP---- 219 (256)
T ss_pred hhhccC-CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh---cC---CCC----
Confidence 665433 2222345667899999988889999999999999999999999997655433222211 00 000
Q ss_pred ccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 714 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
. .......++.+++.+|++.+|++||++.|+++|++
T Consensus 220 -~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~ 255 (256)
T cd08530 220 -P----IPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPA 255 (256)
T ss_pred -C----CchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCC
Confidence 1 11223346778889999999999999999998763
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=301.82 Aligned_cols=274 Identities=17% Similarity=0.278 Sum_probs=197.8
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeecccc-CCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFD-DSS 551 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~-~~~ 551 (786)
.++|...+.||+|+||.||+|+.. +++.||||++...... ....+.+|++++++++|+||+++++++.+.... ...
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 467888999999999999999965 6899999998654322 235678999999999999999999987542211 122
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
....++||||+++ ++...+... ...+++.....++.|+++||+|||+. +|+||||||+||++++++.+|++|||
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~--~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg 160 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENP--SVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADFG 160 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcCc
Confidence 3467999999975 777777643 23689999999999999999999997 99999999999999999999999999
Q ss_pred cccccccccc------------cccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHH
Q 003926 632 LPLLAENAEK------------VGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQ 698 (786)
Q Consensus 632 l~~~~~~~~~------------~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~ 698 (786)
++........ .....++..|+|||.... ..++.++|||||||++|||++|++||...........+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~ 240 (311)
T cd07866 161 LARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIF 240 (311)
T ss_pred cchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9864432111 111233556899998654 358899999999999999999999987654332222211
Q ss_pred HHHH-hccccc------ccccc----cccc---ccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 699 AVVT-ADESAR------RSMVD----PAVN---KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 699 ~~~~-~~~~~~------~~~~d----~~~~---~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
.... ..+... ....+ .... ..........+.+++.+|++.||++|||+.|++.|.||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 241 KLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred HHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence 1111 000000 00000 0000 00011122467789999999999999999999988764
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-33 Score=303.50 Aligned_cols=261 Identities=18% Similarity=0.278 Sum_probs=192.2
Q ss_pred cCccCCCCCceeEEEEec-CCcEEEEEEecccCCCC--------------hHHHHHHHHHHhcCCCCCcceeeeeeeecc
Q 003926 482 SAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHS--------------TRNFMHHIELISKLRHRHLVSALGHCFECY 546 (786)
Q Consensus 482 ~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~--------------~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~ 546 (786)
.+.||+|+||+||+|+.+ +++.||||+++...... ...+.+|++++++++|+||+++++++..
T Consensus 14 ~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-- 91 (335)
T PTZ00024 14 GAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVE-- 91 (335)
T ss_pred hhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEec--
Confidence 467999999999999954 68999999986543211 1257899999999999999999998864
Q ss_pred ccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCccc
Q 003926 547 FDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAK 626 (786)
Q Consensus 547 ~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~k 626 (786)
.+..++||||++ |+|.+++... ..+++.....++.|++.||+|||+. +++||||||+||+++.++.+|
T Consensus 92 -----~~~~~lv~e~~~-~~l~~~l~~~---~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~k 159 (335)
T PTZ00024 92 -----GDFINLVMDIMA-SDLKKVVDRK---IRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICK 159 (335)
T ss_pred -----CCcEEEEEeccc-cCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEE
Confidence 456899999997 6999998652 3588899999999999999999987 999999999999999999999
Q ss_pred ccCCCcccccccc---------------cccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCchh
Q 003926 627 ISSYNLPLLAENA---------------EKVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRKEV 690 (786)
Q Consensus 627 l~DfGl~~~~~~~---------------~~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~~~ 690 (786)
++|||++...... .......++..|++||.+.+. .++.++|||||||++|||+||++|+...+.
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~ 239 (335)
T PTZ00024 160 IADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENE 239 (335)
T ss_pred ECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 9999998544310 011112345678999987654 478999999999999999999999876543
Q ss_pred HHHHHHHHHHHH-hcccccccc--------cccccc---ccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 691 DLLKNQLQAVVT-ADESARRSM--------VDPAVN---KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 691 ~~~~~~~~~~~~-~~~~~~~~~--------~d~~~~---~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
......+..... .....+... ...... ..........+.+++.+||+.+|++||++.|++.|.||.
T Consensus 240 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~ 317 (335)
T PTZ00024 240 IDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFK 317 (335)
T ss_pred HHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccC
Confidence 322221111111 100000000 000000 000111234577889999999999999999999999875
|
|
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-33 Score=290.13 Aligned_cols=253 Identities=17% Similarity=0.333 Sum_probs=200.9
Q ss_pred CCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
+|+..+.||+|+||.||++... ++..||+|++..... ...+++.+|++++++++|+|++++.+.+.. .+.
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~-------~~~ 73 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEE-------KGK 73 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEec-------CCE
Confidence 4677889999999999999965 689999999976543 345678999999999999999999998764 357
Q ss_pred EEEEEecCCCCChhHHhhcCC-CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 555 IFLIFEYVPNGTLRSWISEGH-AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
.++|+||+++++|.+++.... ....+++.....++.+++.||.|||+. +++|+||+|+||+++.++.++|+|||++
T Consensus 74 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~ 150 (258)
T cd08215 74 LCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGIS 150 (258)
T ss_pred EEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccce
Confidence 899999999999999997632 135689999999999999999999997 9999999999999999999999999998
Q ss_pred ccccccc-ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 634 LLAENAE-KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 634 ~~~~~~~-~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
....... ......++..|++||......++.++||||+|+++|||++|+.|+...+........ .... .
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~---~~~~---~---- 220 (258)
T cd08215 151 KVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKI---LKGQ---Y---- 220 (258)
T ss_pred eecccCcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHH---hcCC---C----
Confidence 6543322 112234566789999988888999999999999999999999998765433222111 1100 0
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
+.+.. .....+.+++.+||..+|++|||+.|+++++|+
T Consensus 221 -~~~~~----~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 221 -PPIPS----QYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred -CCCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 11111 122356788889999999999999999988763
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-34 Score=303.37 Aligned_cols=257 Identities=15% Similarity=0.261 Sum_probs=207.5
Q ss_pred HhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCC--hHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHS--TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~--~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
-+..|.+...||+|.|++|..|+.. +|..||||.+++..... .+.+.+|+++|..++|||||+++.+...
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t------- 126 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIET------- 126 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeee-------
Confidence 3567888999999999999999954 69999999998775433 3568999999999999999999998764
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
...+|+||||+.+|.+++++.+.+ .........+..|+.+|++|||+. .|||||||++|||||.++++||+|||
T Consensus 127 ~~~lylV~eya~~ge~~~yl~~~g---r~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfg 200 (596)
T KOG0586|consen 127 EATLYLVMEYASGGELFDYLVKHG---RMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFG 200 (596)
T ss_pred cceeEEEEEeccCchhHHHHHhcc---cchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccc
Confidence 467999999999999999998643 344466777889999999999998 99999999999999999999999999
Q ss_pred cccccccccccccccccccccCccccccCCC-CcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 632 LPLLAENAEKVGHVIPYSGSIDPTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 632 l~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~-t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
++............+++..|.|||...+..| +.++|+||+||++|.|+.|..||++.....+...+... ..
T Consensus 201 fS~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~g------k~-- 272 (596)
T KOG0586|consen 201 FSTFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRG------KY-- 272 (596)
T ss_pred cceeecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheee------ee--
Confidence 9988877777778889999999999888776 47999999999999999999999875433322111000 00
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~ 760 (786)
.++-. ...+.-+++.+.+..+|.+|++++++.++-|......
T Consensus 273 rIp~~--------ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~~~ 314 (596)
T KOG0586|consen 273 RIPFY--------MSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDLLE 314 (596)
T ss_pred cccce--------eechhHHHHHHhhccCccccCCHHHhhhhcccchhhh
Confidence 00111 1123346777889999999999999999998655433
|
|
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-33 Score=298.66 Aligned_cols=250 Identities=19% Similarity=0.331 Sum_probs=192.6
Q ss_pred CCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 479 FDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
|+..+.||+|+||.||+|+.. ++..||+|.+..... ...+++.+|+++++.++|+|++++++++.. ...
T Consensus 17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~~ 89 (308)
T cd06634 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-------EHT 89 (308)
T ss_pred HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEc-------CCe
Confidence 555688999999999999964 688999999864322 223568899999999999999999998875 356
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++||||+. |++.+++.... ..+++.++..++.+++.|+.|||+. +++||||||+||+++.++.+|++|||++.
T Consensus 90 ~~lv~e~~~-~~l~~~~~~~~--~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~ 163 (308)
T cd06634 90 AWLVMEYCL-GSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSAS 163 (308)
T ss_pred eEEEEEccC-CCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccce
Confidence 899999997 68888775432 3588999999999999999999987 99999999999999999999999999986
Q ss_pred ccccccccccccccccccCccccc---cCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 635 LAENAEKVGHVIPYSGSIDPTNSA---RGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~aPe~~~---~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
..... ....++..|+|||... .+.++.++|||||||++|||++|+.|+...........+ ... ..
T Consensus 164 ~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~---~~~---~~--- 231 (308)
T cd06634 164 IMAPA---NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI---AQN---ES--- 231 (308)
T ss_pred eecCc---ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHH---hhc---CC---
Confidence 54322 1234566799999864 356888999999999999999999997654322111110 000 00
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
+.... ......+.+++.+||+.+|++||++.+|+.++|+...
T Consensus 232 --~~~~~---~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~ 273 (308)
T cd06634 232 --PALQS---GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 273 (308)
T ss_pred --CCcCc---ccccHHHHHHHHHHhhCCcccCCCHHHHhhCcccccc
Confidence 11101 1122346678889999999999999999999987664
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-34 Score=298.61 Aligned_cols=252 Identities=15% Similarity=0.288 Sum_probs=192.6
Q ss_pred CCCccCccCCCCCceeEEEEecCCcEEEEEEecccCC--CChHHHHHHHHHHhcCC-CCCcceeeeeeeeccccCCCCce
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKC--HSTRNFMHHIELISKLR-HRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~-H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
.|++.+.||.||.+.||++...+.+.+|+|++..... +....|.+|+..|.+++ |.+||++++|-.. .+.
T Consensus 362 ~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~-------d~~ 434 (677)
T KOG0596|consen 362 EYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVT-------DGY 434 (677)
T ss_pred hhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeecc-------Cce
Confidence 4667789999999999999988888999998765433 34578999999999995 9999999998653 567
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
+|+||||-+- ||..+|.+... ...+| .+..+..|++.++.++|.. +|||.||||.|+|+-. |.+||.|||+|.
T Consensus 435 lYmvmE~Gd~-DL~kiL~k~~~-~~~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlVk-G~LKLIDFGIA~ 507 (677)
T KOG0596|consen 435 LYMVMECGDI-DLNKILKKKKS-IDPDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLVK-GRLKLIDFGIAN 507 (677)
T ss_pred EEEEeecccc-cHHHHHHhccC-CCchH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEEe-eeEEeeeechhc
Confidence 9999999865 99999986432 23446 6778999999999999998 9999999999999864 578999999997
Q ss_pred cccccccc---ccccccccccCccccccC-----------CCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHH
Q 003926 635 LAENAEKV---GHVIPYSGSIDPTNSARG-----------KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAV 700 (786)
Q Consensus 635 ~~~~~~~~---~~~~~~~~~~aPe~~~~~-----------~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~ 700 (786)
.+...... ...+||..||+||.+... +++.++||||+|||||+|+.|++||... ...+...
T Consensus 508 aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~-----~n~~aKl 582 (677)
T KOG0596|consen 508 AIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQI-----INQIAKL 582 (677)
T ss_pred ccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHH-----HHHHHHH
Confidence 66443221 245789999999986532 3567999999999999999999999632 1111111
Q ss_pred HHhccccccccccccccccCcH-HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 701 VTADESARRSMVDPAVNKACLD-ESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 701 ~~~~~~~~~~~~d~~~~~~~~~-~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
..+.||...-++++ ....++++++..||+.||++|||..|+++|++..
T Consensus 583 --------~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~ 631 (677)
T KOG0596|consen 583 --------HAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHPFLQ 631 (677)
T ss_pred --------HhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCcccc
Confidence 11222211111110 0012277888999999999999999999998744
|
|
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=331.16 Aligned_cols=252 Identities=19% Similarity=0.342 Sum_probs=196.2
Q ss_pred hcCCCccCccCCCCCceeEEEE-ecCCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
+-++.....||.|.||.||-|. .++|...|||.++.... .....+.+|+.++..++|||+|+++|+-.+ .
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvH-------R 1306 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVH-------R 1306 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeec-------H
Confidence 3456778899999999999998 67899999999875543 334668899999999999999999998664 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..+|.||||++|+|.+.+... ...+......+..|++.|++|||+. +||||||||.||+||.++.+|++|||.
T Consensus 1307 ekv~IFMEyC~~GsLa~ll~~g---ri~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGs 1380 (1509)
T KOG4645|consen 1307 EKVYIFMEYCEGGSLASLLEHG---RIEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGS 1380 (1509)
T ss_pred HHHHHHHHHhccCcHHHHHHhc---chhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccc
Confidence 6789999999999999998753 2456666667888999999999998 999999999999999999999999999
Q ss_pred ccccccc-c----ccccccccccccCccccccCC---CCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhc
Q 003926 633 PLLAENA-E----KVGHVIPYSGSIDPTNSARGK---LEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704 (786)
Q Consensus 633 ~~~~~~~-~----~~~~~~~~~~~~aPe~~~~~~---~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 704 (786)
|+..... + ......||+.|||||++.+.+ -..++||||+|||++||+||++||...+.+ |.. +....
T Consensus 1381 a~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne----~aI-My~V~ 1455 (1509)
T KOG4645|consen 1381 AVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE----WAI-MYHVA 1455 (1509)
T ss_pred eeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch----hHH-HhHHh
Confidence 8544322 1 223567899999999986543 345789999999999999999999654322 111 11111
Q ss_pred cccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 705 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
.+. -|.+ +.....+-.+++.+|++.||++|.++.|+++|-+
T Consensus 1456 ~gh-----~Pq~----P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f 1496 (1509)
T KOG4645|consen 1456 AGH-----KPQI----PERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAF 1496 (1509)
T ss_pred ccC-----CCCC----chhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhc
Confidence 111 1222 2223344567778999999999999999998765
|
|
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=320.68 Aligned_cols=273 Identities=14% Similarity=0.159 Sum_probs=187.7
Q ss_pred HhcCCCccCccCCCCCceeEEEEecC--CcEEEEEEec--------------cc---CCCChHHHHHHHHHHhcCCCCCc
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLKN--GTFVAIRCLK--------------MK---KCHSTRNFMHHIELISKLRHRHL 535 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~~--g~~vAvK~l~--------------~~---~~~~~~~f~~E~~~l~~l~H~NI 535 (786)
..++|+..+.||+|+||+||++..+. +..+++|.+. .. .......|.+|++++++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 45789999999999999999987542 2223322111 00 01123468899999999999999
Q ss_pred ceeeeeeeeccccCCCCceEEEEEecCCCCChhHHhhcCCC--CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCC
Q 003926 536 VSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHA--HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLK 613 (786)
Q Consensus 536 v~l~g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~--~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk 613 (786)
|++++++.. .+..|+|+||+. ++|.+++..... .......+...++.|++.||.|||+. +|||||||
T Consensus 226 v~l~~~~~~-------~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLK 294 (501)
T PHA03210 226 LKIEEILRS-------EANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIK 294 (501)
T ss_pred CcEeEEEEE-------CCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCC
Confidence 999998865 356899999996 578877754221 11233456678999999999999997 99999999
Q ss_pred CCceeecCCCcccccCCCcccccccccc--cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCC-CCCCch-
Q 003926 614 ITDILLDQNLVAKISSYNLPLLAENAEK--VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRP-LKSRKE- 689 (786)
Q Consensus 614 ~~NILld~~~~~kl~DfGl~~~~~~~~~--~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~-p~~~~~- 689 (786)
|+|||++.++.+||+|||+++....... .....++..|++||.+....++.++|||||||++|||++|.. |+....
T Consensus 295 P~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~ 374 (501)
T PHA03210 295 LENIFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGG 374 (501)
T ss_pred HHHEEECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCC
Confidence 9999999999999999999975543221 123457788999999988889999999999999999999874 443221
Q ss_pred --hHHHHHHHHHHHHhcccc------ccccccc-ccc--ccCcHH------HHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 003926 690 --VDLLKNQLQAVVTADESA------RRSMVDP-AVN--KACLDE------SLKTMMEVCVRCLLKNPAERPSVEDVLWN 752 (786)
Q Consensus 690 --~~~~~~~~~~~~~~~~~~------~~~~~d~-~~~--~~~~~~------~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 752 (786)
...+.+.+.......+.. ..+.++. .+. ...... ....+.+++.+|++.||++|||+.|++.|
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 375 KPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred CHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 122222221110000000 0000000 000 000000 11245667889999999999999999999
Q ss_pred HHHHHH
Q 003926 753 LQFAAQ 758 (786)
Q Consensus 753 l~~~~~ 758 (786)
+||...
T Consensus 455 p~f~~~ 460 (501)
T PHA03210 455 PLFSAE 460 (501)
T ss_pred hhhhcC
Confidence 998753
|
|
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-33 Score=288.11 Aligned_cols=249 Identities=22% Similarity=0.420 Sum_probs=197.5
Q ss_pred CCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
+|+..+.||+|++|.||+|+.. +++.||+|.+..... ...+.+.+|++++++++|+|++++++++.. .+.
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------~~~ 73 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIET-------SDS 73 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEe-------CCE
Confidence 3667889999999999999865 688999999986643 234679999999999999999999998765 356
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++||||+++++|.+++... ..+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 74 ~~~v~e~~~~~~L~~~~~~~---~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~ 147 (254)
T cd06627 74 LYIILEYAENGSLRQIIKKF---GPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVAT 147 (254)
T ss_pred EEEEEecCCCCcHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccce
Confidence 89999999999999998753 3689999999999999999999997 99999999999999999999999999986
Q ss_pred ccccccc-cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccccc
Q 003926 635 LAENAEK-VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVD 713 (786)
Q Consensus 635 ~~~~~~~-~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 713 (786)
....... .....++..|++||......++.++||||+|+++|||++|+.|+........... ..... .
T Consensus 148 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~---~~~~~----~---- 216 (254)
T cd06627 148 KLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFR---IVQDD----H---- 216 (254)
T ss_pred ecCCCcccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHH---HhccC----C----
Confidence 5533222 1223456679999988777789999999999999999999999865432111111 00000 0
Q ss_pred ccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 714 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
+.... .....+.+++.+||..+|++||++.|++.+.|
T Consensus 217 ~~~~~----~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~ 253 (254)
T cd06627 217 PPLPE----GISPELKDFLMQCFQKDPNLRPTAKQLLKHPW 253 (254)
T ss_pred CCCCC----CCCHHHHHHHHHHHhCChhhCcCHHHHhcCCC
Confidence 11111 11235667888999999999999999997765
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-33 Score=294.11 Aligned_cols=256 Identities=17% Similarity=0.298 Sum_probs=195.3
Q ss_pred CCCccCccCCCCCceeEEEEe----cCCcEEEEEEecccCC----CChHHHHHHHHHHhcC-CCCCcceeeeeeeecccc
Q 003926 478 NFDTSAFMGEGSQGQMYRGRL----KNGTFVAIRCLKMKKC----HSTRNFMHHIELISKL-RHRHLVSALGHCFECYFD 548 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~----~~g~~vAvK~l~~~~~----~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~ 548 (786)
+|+..+.||+|+||.||+|+. .+|..||+|+++.... ...+.+.+|+++++++ +|+||+++++++..
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~---- 76 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT---- 76 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeec----
Confidence 366778999999999999985 3689999999875322 2346788999999999 59999999887654
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCccccc
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKIS 628 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~ 628 (786)
....++||||+++|+|.+++... ..+++.....++.|+++||.|||+. +++||||||+||+++.++.+||+
T Consensus 77 ---~~~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~ 147 (290)
T cd05613 77 ---DTKLHLILDYINGGELFTHLSQR---ERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLT 147 (290)
T ss_pred ---CCeEEEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEe
Confidence 35689999999999999999753 3578888888999999999999997 99999999999999999999999
Q ss_pred CCCccccccccc--ccccccccccccCccccccC--CCCcccceeehhHHHHHHHhCCCCCCCchh-HHHHHHHHHHHHh
Q 003926 629 SYNLPLLAENAE--KVGHVIPYSGSIDPTNSARG--KLEEKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVVTA 703 (786)
Q Consensus 629 DfGl~~~~~~~~--~~~~~~~~~~~~aPe~~~~~--~~t~ksDVwSfGvvl~ElltG~~p~~~~~~-~~~~~~~~~~~~~ 703 (786)
|||++....... ......++..|++||..... .++.++||||||+++|||++|+.|+..... .............
T Consensus 148 dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~ 227 (290)
T cd05613 148 DFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKS 227 (290)
T ss_pred eCccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhcc
Confidence 999986543221 11223456789999987653 468899999999999999999999864221 1111111111110
Q ss_pred ccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHHHHHHHHh
Q 003926 704 DESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERP-----SVEDVLWNLQFAAQV 759 (786)
Q Consensus 704 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~~l~~~~~~ 759 (786)
. +... ......+.+++.+||+.||++|| ++.+++.|.++.+..
T Consensus 228 ~---------~~~~----~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 275 (290)
T cd05613 228 E---------PPYP----QEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKIN 275 (290)
T ss_pred C---------CCCC----ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCC
Confidence 0 1111 11223456788899999999997 899999999987654
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-33 Score=302.78 Aligned_cols=270 Identities=18% Similarity=0.286 Sum_probs=199.3
Q ss_pred HHHHhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC--CCChHHHHHHHHHHhcCCCCCcceeeeeeeecccc
Q 003926 472 LEEATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK--CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFD 548 (786)
Q Consensus 472 l~~~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~ 548 (786)
+...+++|+..+.||+|+||.||+|+.. +|..||||++.... ....+.+.+|++++++++||||+++.+++...
T Consensus 5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~--- 81 (328)
T cd07856 5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISP--- 81 (328)
T ss_pred eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecC---
Confidence 3456788999999999999999999854 79999999886432 22346788999999999999999999987541
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCccccc
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKIS 628 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~ 628 (786)
....++||||+ +++|.+++.. ..+++.....++.|+++||+|||+. +|+||||||+||++++++.+|++
T Consensus 82 ---~~~~~lv~e~~-~~~L~~~~~~----~~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~ 150 (328)
T cd07856 82 ---LEDIYFVTELL-GTDLHRLLTS----RPLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKIC 150 (328)
T ss_pred ---CCcEEEEeehh-ccCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeC
Confidence 34579999999 4699988864 2477888888999999999999997 99999999999999999999999
Q ss_pred CCCcccccccccccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhc-cc
Q 003926 629 SYNLPLLAENAEKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD-ES 706 (786)
Q Consensus 629 DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~-~~ 706 (786)
|||++...... .....++..|++||.+.. ..++.++|||||||++|||+||++||...........+....... +.
T Consensus 151 dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~ 228 (328)
T cd07856 151 DFGLARIQDPQ--MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDD 228 (328)
T ss_pred ccccccccCCC--cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 99998644321 122234567899998765 468999999999999999999999987544322111111111000 00
Q ss_pred cccccccc-------cc--cccCc-----HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 707 ARRSMVDP-------AV--NKACL-----DESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 707 ~~~~~~d~-------~~--~~~~~-----~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
......+. .. ....+ ......+.+++.+||+.+|++||++.|++.+.|+.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~ 293 (328)
T cd07856 229 VINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAP 293 (328)
T ss_pred HHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCcccc
Confidence 00000000 00 00000 012246778889999999999999999999998754
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-33 Score=305.10 Aligned_cols=272 Identities=18% Similarity=0.287 Sum_probs=195.7
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeecccc-------
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFD------- 548 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~------- 548 (786)
.+|...+.||+|+||.||+|+. .+|..||+|++........+.+.+|++++++++||||+++++++......
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 5678889999999999999985 46899999999776655667899999999999999999999876532110
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeec-CCCcccc
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD-QNLVAKI 627 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld-~~~~~kl 627 (786)
-......++||||++ ++|.+++.. ..+++.....++.|++.||.|||+. +|+||||||+||+++ ++..+|+
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~~kl 156 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLEQ----GPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLVLKI 156 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCceEEE
Confidence 001235799999998 599988864 2588999999999999999999997 999999999999998 4567899
Q ss_pred cCCCcccccccccc----cccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhH-HHHHHHHHHH
Q 003926 628 SSYNLPLLAENAEK----VGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVD-LLKNQLQAVV 701 (786)
Q Consensus 628 ~DfGl~~~~~~~~~----~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~-~~~~~~~~~~ 701 (786)
+|||++........ .....++..|+|||.... ..++.++|||||||++|||++|+.||...... ..........
T Consensus 157 ~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~ 236 (342)
T cd07854 157 GDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVP 236 (342)
T ss_pred CCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcC
Confidence 99999865432111 111234567899997644 45888999999999999999999999654322 1111111100
Q ss_pred Hhccccccc------------cccccc-cccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 702 TADESARRS------------MVDPAV-NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 702 ~~~~~~~~~------------~~d~~~-~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
......... ...+.. ..........++.+++.+||+.||++|||+.|++.|.|+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~ 304 (342)
T cd07854 237 VVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMS 304 (342)
T ss_pred CCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccc
Confidence 000000000 000000 0000111234567889999999999999999999998875
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-33 Score=302.85 Aligned_cols=274 Identities=15% Similarity=0.233 Sum_probs=199.9
Q ss_pred HhcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
..++|+..+.||+|+||.||+|.. .+|..||||++..... ...+.+.+|++++++++||||+++++++..... ...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~ 91 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLS-LDR 91 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcc-ccc
Confidence 456788899999999999999984 4799999999864322 123568899999999999999999998754211 011
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
....++||||+ +++|.+++.. ..+++.....++.|+++||+|||+. +|+||||||+||+++.++.+|++|||
T Consensus 92 ~~~~~lv~e~~-~~~l~~~~~~----~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~dfg 163 (343)
T cd07880 92 FHDFYLVMPFM-GTDLGKLMKH----EKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDFG 163 (343)
T ss_pred cceEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecc
Confidence 23569999999 6799988864 3589999999999999999999997 99999999999999999999999999
Q ss_pred cccccccccccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhH-HHHHHHHHHHHhccc---
Q 003926 632 LPLLAENAEKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVD-LLKNQLQAVVTADES--- 706 (786)
Q Consensus 632 l~~~~~~~~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~-~~~~~~~~~~~~~~~--- 706 (786)
++....... ....++..|++||.... ..++.++|||||||++|||++|++||...... ...............
T Consensus 164 ~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (343)
T cd07880 164 LARQTDSEM--TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQ 241 (343)
T ss_pred cccccccCc--cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 986543221 22344667899998765 35889999999999999999999998754322 111111100000000
Q ss_pred ------------cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 003926 707 ------------ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760 (786)
Q Consensus 707 ------------~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~ 760 (786)
.......... ..........+.+++.+|++.||++|||+.+++.|.||.....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~ 306 (343)
T cd07880 242 KLQSEDAKNYVKKLPRFRKKDF-RSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHD 306 (343)
T ss_pred hhcchhHHHHHHhccccCcchH-HHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcC
Confidence 0000000000 0000112235678899999999999999999999999886543
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=298.62 Aligned_cols=269 Identities=19% Similarity=0.259 Sum_probs=195.3
Q ss_pred CCCccCccCCCCCceeEEEEec-C--CcEEEEEEecccCC--CChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCCC
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK-N--GTFVAIRCLKMKKC--HSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~-~--g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~~ 551 (786)
+|...+.||+|+||.||+++.. + +..||||++..... ...+.+.+|+++++++ +||||+++++++.... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~---~~ 77 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFP---GN 77 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeecc---cc
Confidence 3667789999999999999964 4 78999999875322 2246788999999999 5999999999765321 12
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
....++++||++ ++|.+++... ..+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 78 ~~~~~~~~e~~~-~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg 150 (332)
T cd07857 78 FNELYLYEELME-ADLHQIIRSG---QPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFG 150 (332)
T ss_pred CCcEEEEEeccc-CCHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCC
Confidence 345789999997 6999998653 3589999999999999999999997 99999999999999999999999999
Q ss_pred cccccccccc-----cccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHh-c
Q 003926 632 LPLLAENAEK-----VGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTA-D 704 (786)
Q Consensus 632 l~~~~~~~~~-----~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~-~ 704 (786)
+++....... .....++..|+|||.... ..++.++|||||||++|||++|++||...+.......+...... .
T Consensus 151 ~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 230 (332)
T cd07857 151 LARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPD 230 (332)
T ss_pred CceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCC
Confidence 9864432111 112345677999998655 45889999999999999999999998765432222111111100 0
Q ss_pred ccccccccc-------------ccc-cccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 705 ESARRSMVD-------------PAV-NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 705 ~~~~~~~~d-------------~~~-~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
......+.+ +.. ...........+.+++.+|++.||++|||+.|++.+.|+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~ 296 (332)
T cd07857 231 EETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLA 296 (332)
T ss_pred HHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhh
Confidence 000000000 000 0000001134577888999999999999999999999974
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-34 Score=307.39 Aligned_cols=203 Identities=19% Similarity=0.360 Sum_probs=175.0
Q ss_pred ccCccCCCCCceeEEEE-ecCCcEEEEEEecccC-CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEEE
Q 003926 481 TSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKK-CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLI 558 (786)
Q Consensus 481 ~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV 558 (786)
..+.||+|+||.||+|+ -++|+.||||.++... ....+.+.+|+++|++++|+|||++++.-.+... ....+...+|
T Consensus 17 ~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~-~~~~~~~vlv 95 (732)
T KOG4250|consen 17 MDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFL-GLVTRLPVLV 95 (732)
T ss_pred ehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCcccc-CcccccceEE
Confidence 35789999999999999 5689999999998654 3456789999999999999999999987543221 2224678999
Q ss_pred EecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeec--CCC--cccccCCCccc
Q 003926 559 FEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD--QNL--VAKISSYNLPL 634 (786)
Q Consensus 559 ~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld--~~~--~~kl~DfGl~~ 634 (786)
||||.+|||+..|.+......|+..+.+.+..+++.||.|||++ +||||||||.||++- +++ .-||+|||.|+
T Consensus 96 mEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Ar 172 (732)
T KOG4250|consen 96 MEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAAR 172 (732)
T ss_pred EeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeecccccc
Confidence 99999999999998766667899999999999999999999998 999999999999974 223 46999999999
Q ss_pred ccccccccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCC
Q 003926 635 LAENAEKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSR 687 (786)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~ 687 (786)
-.++........||..|.+||.... +.|+..+|.|||||++||.+||..||..
T Consensus 173 el~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p 226 (732)
T KOG4250|consen 173 ELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIP 226 (732)
T ss_pred cCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCc
Confidence 8888877788889999999998874 7899999999999999999999999854
|
|
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-34 Score=276.85 Aligned_cols=262 Identities=16% Similarity=0.239 Sum_probs=205.1
Q ss_pred hcCCCcc-CccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTS-AFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~-~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
|++|.+. ++||-|-.|.|..+..+ +|+.+|+|++... ....+|+++.=+. .|||||.+++++...+. +.
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~---~r 131 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQ---GR 131 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhcc---Cc
Confidence 5566554 57999999999999865 7999999988643 3456889876665 69999999998865432 34
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC---CCcccccC
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ---NLVAKISS 629 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~---~~~~kl~D 629 (786)
..+++|||+|+||.|...+.++ +...++..+.-.|..||+.|++|||+. .|.||||||+|+|... +-..|++|
T Consensus 132 kcLLiVmE~meGGeLfsriq~~-g~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtD 207 (400)
T KOG0604|consen 132 KCLLIVMECMEGGELFSRIQDR-GDQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTD 207 (400)
T ss_pred eeeEeeeecccchHHHHHHHHc-ccccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEecc
Confidence 5688999999999999999864 456799999999999999999999998 9999999999999864 45689999
Q ss_pred CCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 630 YNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 630 fGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
||+|+.........+.+.|++|.|||++...+|+...|+||+||++|-|++|-|||.......+..-+...+... ..
T Consensus 208 fGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~g---qy 284 (400)
T KOG0604|consen 208 FGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTG---QY 284 (400)
T ss_pred cccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhcc---Cc
Confidence 999987765555556677889999999999999999999999999999999999997654321111111111100 11
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
+. +.+..++..+...+++...|..+|.+|.|+.|++.|+|..+
T Consensus 285 ~F-----P~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~ 327 (400)
T KOG0604|consen 285 EF-----PEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQ 327 (400)
T ss_pred cC-----CChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcc
Confidence 11 12223455666778888899999999999999999998654
|
|
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=295.61 Aligned_cols=249 Identities=17% Similarity=0.306 Sum_probs=192.0
Q ss_pred CCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC---ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 479 FDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH---STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~---~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
|...+.||+|+||.||+|+.. +|..||+|++...... ..+.+.+|++++++++|||++++++++.+ .+.
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------~~~ 95 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLK-------EHT 95 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEe-------CCE
Confidence 445677999999999999864 6899999998754332 23568899999999999999999999875 356
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.|+||||+. |++.+++... ...+++.++..++.|++.|+.|||+. +++||||||+||+++.++.+||+|||++.
T Consensus 96 ~~lv~e~~~-~~l~~~l~~~--~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~ 169 (313)
T cd06633 96 AWLVMEYCL-GSASDLLEVH--KKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSAS 169 (313)
T ss_pred EEEEEecCC-CCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCc
Confidence 899999996 5888877643 23589999999999999999999987 99999999999999999999999999975
Q ss_pred ccccccccccccccccccCccccc---cCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 635 LAENAEKVGHVIPYSGSIDPTNSA---RGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~aPe~~~---~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
..... ....++..|++||.+. .+.++.++|||||||++|||++|++|+...+......... ... ....
T Consensus 170 ~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~---~~~---~~~~ 240 (313)
T cd06633 170 KSSPA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA---QND---SPTL 240 (313)
T ss_pred ccCCC---CCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH---hcC---CCCC
Confidence 43221 1234566799999874 3568899999999999999999999986543322111111 100 0011
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
..+ .....+.+++.+||+.+|.+||++.+++.|.|+..
T Consensus 241 ~~~--------~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~ 278 (313)
T cd06633 241 QSN--------EWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRR 278 (313)
T ss_pred Ccc--------ccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCC
Confidence 111 11124567888999999999999999999988654
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=272.99 Aligned_cols=250 Identities=15% Similarity=0.297 Sum_probs=191.4
Q ss_pred ccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC-ChHHHHHHHHHHhcCC-CCCcceeeeeeeeccccCCCCceEEE
Q 003926 481 TSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH-STRNFMHHIELISKLR-HRHLVSALGHCFECYFDDSSVSRIFL 557 (786)
Q Consensus 481 ~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~-H~NIv~l~g~~~~~~~~~~~~~~~~L 557 (786)
....||.|+.|.|++++.+ +|..+|||.+...... ..+.++..+.++.+.+ .|.||+-+||+.. ....++
T Consensus 96 ~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~-------n~dV~I 168 (391)
T KOG0983|consen 96 NLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFIT-------NTDVFI 168 (391)
T ss_pred hHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEee-------CchHHH
Confidence 3567999999999999965 6999999999866543 3456778888877765 8999999999975 345789
Q ss_pred EEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccc
Q 003926 558 IFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637 (786)
Q Consensus 558 V~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~ 637 (786)
.||.|.- .++.++..- ..++++...=++...+++||.||.+. .+|||||+||+|||+|+.|++|++|||++-...
T Consensus 169 cMelMs~-C~ekLlkri--k~piPE~ilGk~tva~v~AL~YLKeK--H~viHRDvKPSNILlDe~GniKlCDFGIsGrlv 243 (391)
T KOG0983|consen 169 CMELMST-CAEKLLKRI--KGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGNIKLCDFGISGRLV 243 (391)
T ss_pred HHHHHHH-HHHHHHHHh--cCCchHHhhhhhHHHHHHHHHHHHHh--cceeecccCccceEEccCCCEEeecccccceee
Confidence 9999864 455555432 23577766678888999999999986 589999999999999999999999999995554
Q ss_pred cccccccccccccccCcccccc---CCCCcccceeehhHHHHHHHhCCCCCCCc--hhHHHHHHHHHHHHhccccccccc
Q 003926 638 NAEKVGHVIPYSGSIDPTNSAR---GKLEEKIDIYDFGLILLEIIVGRPLKSRK--EVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 638 ~~~~~~~~~~~~~~~aPe~~~~---~~~t~ksDVwSfGvvl~ElltG~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
+........|.+.|||||.+.- .+|+.++|||||||+++||+||+.||... +.+.+...++ .. .
T Consensus 244 dSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln----~e----P--- 312 (391)
T KOG0983|consen 244 DSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLN----EE----P--- 312 (391)
T ss_pred cccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHh----cC----C---
Confidence 4444445567789999998753 46999999999999999999999999874 4443333222 11 1
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
|.++... .....+.+++..||++|+.+||.-.++++|.+..
T Consensus 313 -P~L~~~~--gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~ 353 (391)
T KOG0983|consen 313 -PLLPGHM--GFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIK 353 (391)
T ss_pred -CCCCccc--CcCHHHHHHHHHHhhcCcccCcchHHHhcCccee
Confidence 2222111 1234677788899999999999999999998744
|
|
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-33 Score=289.26 Aligned_cols=251 Identities=21% Similarity=0.270 Sum_probs=189.9
Q ss_pred CCccCccCCCCCceeEEEEec-CCcEEEEEEecccC-----CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 479 FDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK-----CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-----~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
|...+.||+|+||.||+++.. .+..+++|.++... .....++.+|+.++++++||||+++++++.. .
T Consensus 2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~ 74 (260)
T cd08222 2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLE-------R 74 (260)
T ss_pred ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhc-------C
Confidence 667789999999999999864 34556666655322 1223467789999999999999999998754 3
Q ss_pred ceEEEEEecCCCCChhHHhhcC-CCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 553 SRIFLIFEYVPNGTLRSWISEG-HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
+..++||||+++++|.+++... .....+++..++.++.|+++|+.|||+. +++|+||||+||+++.+ .+|++|||
T Consensus 75 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~~-~~~l~d~g 150 (260)
T cd08222 75 DAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKNN-LLKIGDFG 150 (260)
T ss_pred CceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeecC-CEeecccC
Confidence 4589999999999999988642 1234689999999999999999999997 99999999999999864 59999999
Q ss_pred ccccccccc-ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 632 LPLLAENAE-KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 632 l~~~~~~~~-~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
++....... ......++..|++||......++.++||||||+++|||++|+.|+........... ... .
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~---~~~-~------ 220 (260)
T cd08222 151 VSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLR---IVE-G------ 220 (260)
T ss_pred ceeecCCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHH---HHc-C------
Confidence 986543221 11223455678999998777889999999999999999999999865432221111 100 0
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
..+.. +......+.+++.+||..+|++||++.|+++|+|+
T Consensus 221 -~~~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 221 -PTPSL----PETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred -CCCCC----cchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 01111 12223466788889999999999999999998763
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-33 Score=307.16 Aligned_cols=269 Identities=18% Similarity=0.329 Sum_probs=218.0
Q ss_pred CHHHHHHHhcCCCccCccCCCCCceeEEEE-ecCCcEEEEEEecccCCCChHHHHHHHHHHhcC-CCCCcceeeeeeeec
Q 003926 468 SLEELEEATNNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTRNFMHHIELISKL-RHRHLVSALGHCFEC 545 (786)
Q Consensus 468 ~~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~ 545 (786)
.++.+...++-|++.++||+|.+|.||+++ .++|+.+|||++.... ...++...|.++++.. .|||++.++|++...
T Consensus 10 ~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-d~deEiE~eynil~~~~~hpnv~~fyg~~~k~ 88 (953)
T KOG0587|consen 10 DLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-DEEEEIELEYNMLKKYSHHPNVATFYGAFIKK 88 (953)
T ss_pred chhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc-cccHHHHHHHHHHHhccCCCCcceEEEEEEEe
Confidence 344455567778899999999999999999 5679999999987654 3456778888888887 699999999998753
Q ss_pred cccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcc
Q 003926 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVA 625 (786)
Q Consensus 546 ~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~ 625 (786)
. ...++++|||||||.+||.-|++++-. ...+.|.....|+..+++|+.+||.+ .++|||+|-.|||+..++.+
T Consensus 89 ~--~~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~V 162 (953)
T KOG0587|consen 89 D--PGNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEV 162 (953)
T ss_pred c--CCCCCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcE
Confidence 3 245689999999999999999998755 56799999999999999999999998 89999999999999999999
Q ss_pred cccCCCccccccccc-ccccccccccccCccccccC-----CCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHH
Q 003926 626 KISSYNLPLLAENAE-KVGHVIPYSGSIDPTNSARG-----KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQA 699 (786)
Q Consensus 626 kl~DfGl~~~~~~~~-~~~~~~~~~~~~aPe~~~~~-----~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~ 699 (786)
|+.|||++...+... ...+.+||+.|||||++... .|+..+|+||+||+..||..|.||+.+..... .
T Consensus 163 KLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmr------a 236 (953)
T KOG0587|consen 163 KLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMR------A 236 (953)
T ss_pred EEeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhh------h
Confidence 999999986655433 34567899999999997653 47889999999999999999999987654321 1
Q ss_pred HHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 700 VVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 700 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
.+... . .|......+....+++.+++..|+.+|-++||++.++++|++..
T Consensus 237 LF~Ip-----R--NPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~ 286 (953)
T KOG0587|consen 237 LFLIP-----R--NPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFIT 286 (953)
T ss_pred hccCC-----C--CCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCccc
Confidence 11111 1 12112223456677889999999999999999999999988754
|
|
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-33 Score=292.41 Aligned_cols=250 Identities=18% Similarity=0.325 Sum_probs=197.9
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHHHHHHHhcCC-CCCcceeeeeeeeccccCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIELISKLR-HRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~-H~NIv~l~g~~~~~~~~~~~ 551 (786)
++|...+.||+|+||.||+|+.. +|+.||+|++..... ...+.+.+|++++++++ |+||+++++++..
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~------- 73 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQD------- 73 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcC-------
Confidence 36788899999999999999965 799999999876432 22456889999999998 9999999987754
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
.+..++||||+++|+|.+++.+. ..+++.....++.|++.||.|||+. +++|+||||+||+++.++.++++|||
T Consensus 74 ~~~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~ 147 (280)
T cd05581 74 EENLYFVLEYAPNGELLQYIRKY---GSLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFG 147 (280)
T ss_pred CceEEEEEcCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCc
Confidence 45689999999999999999763 2699999999999999999999997 99999999999999999999999999
Q ss_pred ccccccccc---------------------ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchh
Q 003926 632 LPLLAENAE---------------------KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEV 690 (786)
Q Consensus 632 l~~~~~~~~---------------------~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~ 690 (786)
++....... ......++..|++||......++.++||||||++++|+++|+.|+.....
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~ 227 (280)
T cd05581 148 TAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE 227 (280)
T ss_pred cccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH
Confidence 985442211 11122345678999998888899999999999999999999999876543
Q ss_pred HHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCH----HHHHHHHHH
Q 003926 691 DLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSV----EDVLWNLQF 755 (786)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~----~evl~~l~~ 755 (786)
...... ..... ... +......+.+++.+||+.+|++||++ +|+++|+||
T Consensus 228 ~~~~~~---~~~~~---------~~~----~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 228 YLTFQK---ILKLE---------YSF----PPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred HHHHHH---HHhcC---------CCC----CCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 221111 11100 001 11113456788889999999999999 999988764
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-33 Score=274.74 Aligned_cols=254 Identities=19% Similarity=0.284 Sum_probs=202.6
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCCh---HHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHST---RNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~---~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
-++|+..++||+|.||+|-.++-+ +|+.+|+|++++.-.-.. ..-+.|-++|+..+||.+..+.-.+. .
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQ-------t 239 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQ-------T 239 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhc-------c
Confidence 457788899999999999999854 799999999987643333 34577889999999999887653332 3
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
.+.+|.||||+.+|.|.-+|... ..++......+...|+.||.|||++ +||.||+|.+|.|+|.+|++||+|||
T Consensus 240 ~drlCFVMeyanGGeLf~HLsre---r~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFG 313 (516)
T KOG0690|consen 240 QDRLCFVMEYANGGELFFHLSRE---RVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFG 313 (516)
T ss_pred CceEEEEEEEccCceEeeehhhh---hcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecc
Confidence 67899999999999999988753 3577777778889999999999998 99999999999999999999999999
Q ss_pred ccccc-ccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 632 LPLLA-ENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 632 l~~~~-~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
+.+.. ..+....+.+|++.|.|||++....|+..+|+|.+|||+|||++|+.||...+.+.+.+.+-. . +
T Consensus 314 LCKE~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~---e------d 384 (516)
T KOG0690|consen 314 LCKEEIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILM---E------D 384 (516)
T ss_pred cchhcccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHh---h------h
Confidence 98643 345566778999999999999999999999999999999999999999987665554443321 1 1
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERP-----SVEDVLWNLQFAAQ 758 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~~l~~~~~ 758 (786)
+--|+ ....+...+....+.+||.+|- .+.||.+|.+|+..
T Consensus 385 ~kFPr-------~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v 430 (516)
T KOG0690|consen 385 LKFPR-------TLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASV 430 (516)
T ss_pred ccCCc-------cCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccC
Confidence 10111 1112334555678899999994 48899999988763
|
|
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-33 Score=302.76 Aligned_cols=272 Identities=15% Similarity=0.264 Sum_probs=198.5
Q ss_pred HhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
..++|+..+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|+.++++++|+||+++++++..... ...
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~ 91 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASS-LED 91 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccc-ccc
Confidence 3567888999999999999999965 688999999865322 234567889999999999999999987653211 012
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
....++|+||+ +++|.+++.. ..+++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg 163 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVKC----QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFG 163 (343)
T ss_pred cccEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEcccc
Confidence 23589999999 5699999864 3589999999999999999999997 99999999999999999999999999
Q ss_pred cccccccccccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccc-cc
Q 003926 632 LPLLAENAEKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESA-RR 709 (786)
Q Consensus 632 l~~~~~~~~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~-~~ 709 (786)
++...... .....++..|++||.... ..++.++|||||||++|||+||++||...........+.......... ..
T Consensus 164 ~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 241 (343)
T cd07851 164 LARHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQ 241 (343)
T ss_pred cccccccc--ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHh
Confidence 98654322 222345567899998754 357899999999999999999999987544322111111110000000 00
Q ss_pred cccc----------ccccc----cCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 710 SMVD----------PAVNK----ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 710 ~~~d----------~~~~~----~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.+.+ +.... .........+.+++.+||+.+|++|||+.||++|+|+.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~ 303 (343)
T cd07851 242 KISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAE 303 (343)
T ss_pred hccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccc
Confidence 0000 00000 000012346778999999999999999999999998775
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-32 Score=290.64 Aligned_cols=254 Identities=17% Similarity=0.273 Sum_probs=190.6
Q ss_pred CCCccCccCCCCCceeEEEEe----cCCcEEEEEEecccCC----CChHHHHHHHHHHhcC-CCCCcceeeeeeeecccc
Q 003926 478 NFDTSAFMGEGSQGQMYRGRL----KNGTFVAIRCLKMKKC----HSTRNFMHHIELISKL-RHRHLVSALGHCFECYFD 548 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~----~~g~~vAvK~l~~~~~----~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~ 548 (786)
+|+..+.||+|+||.||+++. .++..||||.++.... ...+.+.+|++++.++ +||||+++++.+..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~---- 76 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQT---- 76 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeec----
Confidence 366778999999999999974 2578999999875321 2345688999999999 59999999987653
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCccccc
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKIS 628 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~ 628 (786)
....++||||+++|+|.+++... ..+++.....++.|+++||.|||+. +++||||||+||+++.++.++++
T Consensus 77 ---~~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~ 147 (288)
T cd05583 77 ---DTKLHLILDYVNGGELFTHLYQR---EHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLT 147 (288)
T ss_pred ---CCEEEEEEecCCCCcHHHHHhhc---CCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEE
Confidence 35689999999999999998753 3588999999999999999999987 99999999999999999999999
Q ss_pred CCCcccccccccc--cccccccccccCccccccCC--CCcccceeehhHHHHHHHhCCCCCCCchhH-HHHHHHHHHHHh
Q 003926 629 SYNLPLLAENAEK--VGHVIPYSGSIDPTNSARGK--LEEKIDIYDFGLILLEIIVGRPLKSRKEVD-LLKNQLQAVVTA 703 (786)
Q Consensus 629 DfGl~~~~~~~~~--~~~~~~~~~~~aPe~~~~~~--~t~ksDVwSfGvvl~ElltG~~p~~~~~~~-~~~~~~~~~~~~ 703 (786)
|||++........ .....+...|++||...... .+.++||||||+++|||+||+.|+...... ............
T Consensus 148 dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 227 (288)
T cd05583 148 DFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKS 227 (288)
T ss_pred ECccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHcc
Confidence 9999865432211 11234567899999876654 788999999999999999999998532211 111111111111
Q ss_pred ccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHH---HHHHHHHHHH
Q 003926 704 DESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVE---DVLWNLQFAA 757 (786)
Q Consensus 704 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~---evl~~l~~~~ 757 (786)
.+.... .....+.+++.+||+.||++|||++ +++.|+|+..
T Consensus 228 ---------~~~~~~----~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~ 271 (288)
T cd05583 228 ---------KPPFPK----TMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQG 271 (288)
T ss_pred ---------CCCCCc----ccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCccccc
Confidence 011111 1123456788899999999999965 4577777654
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.9e-32 Score=288.25 Aligned_cols=258 Identities=9% Similarity=0.063 Sum_probs=179.8
Q ss_pred cCCCccCccCCCCCceeEEEEecC----CcEEEEEEecccCCCCh-----------HHHHHHHHHHhcCCCCCcceeeee
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKN----GTFVAIRCLKMKKCHST-----------RNFMHHIELISKLRHRHLVSALGH 541 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~----g~~vAvK~l~~~~~~~~-----------~~f~~E~~~l~~l~H~NIv~l~g~ 541 (786)
+.|...+.||+|+||.||+|...+ +..+|+|.......... .....+...+..+.|+||++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 468888999999999999999653 45667775433222111 112334455677899999999997
Q ss_pred eeeccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC
Q 003926 542 CFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ 621 (786)
Q Consensus 542 ~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~ 621 (786)
+.... ......++++|++.. ++.+.+... ...++.....++.|+++||+|||+. +|+||||||+|||++.
T Consensus 92 ~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~ 161 (294)
T PHA02882 92 GSFKR---CRMYYRFILLEKLVE-NTKEIFKRI---KCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDG 161 (294)
T ss_pred eeEec---CCceEEEEEEehhcc-CHHHHHHhh---ccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcC
Confidence 65321 112245788888754 666666532 2357788889999999999999997 9999999999999999
Q ss_pred CCcccccCCCccccccccc--------ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCch-hHH
Q 003926 622 NLVAKISSYNLPLLAENAE--------KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKE-VDL 692 (786)
Q Consensus 622 ~~~~kl~DfGl~~~~~~~~--------~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~-~~~ 692 (786)
++.+||+|||+++...... ......++..|+|||......++.++|||||||++|||++|++||.... ...
T Consensus 162 ~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~ 241 (294)
T PHA02882 162 NNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGN 241 (294)
T ss_pred CCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchH
Confidence 9999999999986442111 1112357788999999888889999999999999999999999997542 222
Q ss_pred HHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 003926 693 LKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNL 753 (786)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l 753 (786)
.......-... .+..+... .......+.+++..||..+|++||++.++.+.+
T Consensus 242 ~~~~~~~~~~~------~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 242 LIHAAKCDFIK------RLHEGKIK---IKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHHHhHHHHHH------Hhhhhhhc---cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 11111110000 00000000 011124567788899999999999999998754
|
|
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.1e-33 Score=273.52 Aligned_cols=273 Identities=20% Similarity=0.283 Sum_probs=201.8
Q ss_pred hcCCCccCccCCCCCceeEEEEec---C--CcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeecccc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK---N--GTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFD 548 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~---~--g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~ 548 (786)
...|+....||+|.||.||||+.+ + ...+|||+++.++. .-.....+|+.+++.++|||||.+..++...
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~--- 99 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSH--- 99 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhcc---
Confidence 345778899999999999999643 2 23799999986643 2356789999999999999999999887652
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcC--CCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCC----
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEG--HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN---- 622 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~--~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~---- 622 (786)
....++++||.+. ||..+|+-. .....++......|.-||..|+.|||++ -|+||||||.|||+..+
T Consensus 100 ---d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgper 172 (438)
T KOG0666|consen 100 ---DKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPER 172 (438)
T ss_pred ---CceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCcc
Confidence 3568999999998 999988632 2234688888899999999999999998 89999999999999877
Q ss_pred CcccccCCCccccccccc----ccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCchh-------
Q 003926 623 LVAKISSYNLPLLAENAE----KVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRKEV------- 690 (786)
Q Consensus 623 ~~~kl~DfGl~~~~~~~~----~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~~~------- 690 (786)
|.+||+|+|+++.....- .......|..|.|||.+.+. .||.+.|||+.|||..||+|-+|.|...+.
T Consensus 173 G~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~P 252 (438)
T KOG0666|consen 173 GRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNP 252 (438)
T ss_pred CeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCC
Confidence 899999999998765432 12234456789999998765 499999999999999999999888754322
Q ss_pred ---HHHHHHHHHHHHhcccccccc---ccc-------c--ccccC-cHH-------HHHHHHHHHHHhccCCCCCCCCHH
Q 003926 691 ---DLLKNQLQAVVTADESARRSM---VDP-------A--VNKAC-LDE-------SLKTMMEVCVRCLLKNPAERPSVE 747 (786)
Q Consensus 691 ---~~~~~~~~~~~~~~~~~~~~~---~d~-------~--~~~~~-~~~-------~~~~~~~l~~~Cl~~dP~~RPt~~ 747 (786)
+.+..+...........+..+ .+- + ....+ ... .....+++..+++..||.+|-|+.
T Consensus 253 fq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~ 332 (438)
T KOG0666|consen 253 FQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAE 332 (438)
T ss_pred chHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHH
Confidence 222233222222222222211 110 0 00000 000 012366888899999999999999
Q ss_pred HHHHHHHHHHH
Q 003926 748 DVLWNLQFAAQ 758 (786)
Q Consensus 748 evl~~l~~~~~ 758 (786)
+.++|.+|...
T Consensus 333 qAleh~yF~~d 343 (438)
T KOG0666|consen 333 QALEHPYFTED 343 (438)
T ss_pred HHhcccccccC
Confidence 99999988753
|
|
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.1e-32 Score=248.18 Aligned_cols=266 Identities=21% Similarity=0.301 Sum_probs=198.2
Q ss_pred CCccCccCCCCCceeEEEE-ecCCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 479 FDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
|+..+.||+|.||+||||+ .++++.||+|+++..+.. -....++|+-+++.++|+|||++++.... ...+
T Consensus 4 ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhs-------dkkl 76 (292)
T KOG0662|consen 4 YDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS-------DKKL 76 (292)
T ss_pred hHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhcc-------Ccee
Confidence 4556789999999999999 567999999998765432 24678999999999999999999987543 4568
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
-+|+|||.. +|..+..... ..++......++.|+.+||.|+|+. .+.|||+||.|.|++.+++.|++|||+++.
T Consensus 77 tlvfe~cdq-dlkkyfdsln--g~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglara 150 (292)
T KOG0662|consen 77 TLVFEFCDQ-DLKKYFDSLN--GDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARA 150 (292)
T ss_pred EEeHHHhhH-HHHHHHHhcC--CcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhh
Confidence 899999976 8988877543 3588888899999999999999998 899999999999999999999999999875
Q ss_pred ccccc-ccccccccccccCccccccCC-CCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHH-HHHhcccccccc
Q 003926 636 AENAE-KVGHVIPYSGSIDPTNSARGK-LEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQA-VVTADESARRSM 711 (786)
Q Consensus 636 ~~~~~-~~~~~~~~~~~~aPe~~~~~~-~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 711 (786)
..-.- -+.....+..|.+|.++.+.+ |++..|+||-||++.|+.. |+|.|.+.+.++..+.+-+ .....+..+..+
T Consensus 151 fgipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~ 230 (292)
T KOG0662|consen 151 FGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSM 230 (292)
T ss_pred cCCceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCcc
Confidence 53221 122233456788898876654 8999999999999999986 7888887766543333322 223333333333
Q ss_pred ---ccccc----ccc-CcHHHHH----HHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 712 ---VDPAV----NKA-CLDESLK----TMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 712 ---~d~~~----~~~-~~~~~~~----~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.|-.. +.. ...+.+. .=.++..+.+.-+|.+|-++++.++|++|..
T Consensus 231 t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d 288 (292)
T KOG0662|consen 231 TKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSD 288 (292)
T ss_pred ccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCccccc
Confidence 22111 100 1111111 2245666778889999999999999988764
|
|
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.7e-34 Score=274.02 Aligned_cols=256 Identities=15% Similarity=0.232 Sum_probs=190.0
Q ss_pred cCccCCCCCceeEEEEec-CCcEEEEEEecccCC-CChHHHHHHHHH-HhcCCCCCcceeeeeeeeccccCCCCceEEEE
Q 003926 482 SAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIEL-ISKLRHRHLVSALGHCFECYFDDSSVSRIFLI 558 (786)
Q Consensus 482 ~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~-l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV 558 (786)
...||.|+||+|+|-.++ .|+.+|||+++.... ...++++.|.+. |+.-+-||||+++|.++. .+..|+.
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~-------EGdcWiC 141 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFS-------EGDCWIC 141 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhc-------CCceeee
Confidence 467999999999999865 699999999986543 345678888875 455579999999999875 4568999
Q ss_pred EecCCCCChhHHhhcC--CCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccc
Q 003926 559 FEYVPNGTLRSWISEG--HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636 (786)
Q Consensus 559 ~Ey~~~GsL~~~l~~~--~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~ 636 (786)
||.|.- ||+.+...- -....++..-.-.|++..++||.||-+. ..|||||+||+|||+|..|.+|++|||++-..
T Consensus 142 MELMd~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~--lkiIHRDvKPSNILldr~G~vKLCDFGIcGqL 218 (361)
T KOG1006|consen 142 MELMDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEE--LKIIHRDVKPSNILLDRHGDVKLCDFGICGQL 218 (361)
T ss_pred HHHHhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHH--hhhhhccCChhheEEecCCCEeeecccchHhH
Confidence 999974 776543210 1123477777778888899999999987 48999999999999999999999999998544
Q ss_pred ccccccccccccccccCcccccc--CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccc
Q 003926 637 ENAEKVGHVIPYSGSIDPTNSAR--GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDP 714 (786)
Q Consensus 637 ~~~~~~~~~~~~~~~~aPe~~~~--~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 714 (786)
...-....-.|...|||||.+.. ..|+.+|||||+||+|||+.||+.|+..-+ .+.+++..++.... +.+..
T Consensus 219 v~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~--svfeql~~Vv~gdp----p~l~~ 292 (361)
T KOG1006|consen 219 VDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWD--SVFEQLCQVVIGDP----PILLF 292 (361)
T ss_pred HHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHH--HHHHHHHHHHcCCC----CeecC
Confidence 33333334456778999998653 248999999999999999999999987533 23334333332211 11111
Q ss_pred cccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 715 AVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 715 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
. ..+ -+....+..++..|+.+|-.+||...++.++.+..
T Consensus 293 ~--~~~-~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr 331 (361)
T KOG1006|consen 293 D--KEC-VHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYR 331 (361)
T ss_pred c--ccc-cccCHHHHHHHHHHhhcccccCcchhhhhcCchhh
Confidence 1 011 12234677888899999999999999999888654
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=2e-32 Score=276.02 Aligned_cols=263 Identities=20% Similarity=0.301 Sum_probs=205.3
Q ss_pred CHHHHHHHhcCCCccCccCCCCCceeEEEEec------CCcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeee
Q 003926 468 SLEELEEATNNFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALG 540 (786)
Q Consensus 468 ~~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g 540 (786)
..+++......+.....+-+|.||.||+|.|. +.+.|-||.++....+ +...|+.|.-.+..+.|||+.++.|
T Consensus 275 r~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~ 354 (563)
T KOG1024|consen 275 RLQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLG 354 (563)
T ss_pred hHHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeE
Confidence 34566666667888888999999999999654 3455777777654322 2356899999999999999999999
Q ss_pred eeeeccccCCCCceEEEEEecCCCCChhHHhhc-----CCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCC
Q 003926 541 HCFECYFDDSSVSRIFLIFEYVPNGTLRSWISE-----GHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKIT 615 (786)
Q Consensus 541 ~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~-----~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~ 615 (786)
+|.+. ....+++|.|+.-|+|..+|.. ....+.++-.+...+|.|++.||+|||+. ++||.||.++
T Consensus 355 V~ie~------~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaR 425 (563)
T KOG1024|consen 355 VSIED------YATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAAR 425 (563)
T ss_pred EEeec------cCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhh
Confidence 99872 3457899999999999999983 22335677888899999999999999998 9999999999
Q ss_pred ceeecCCCcccccCCCccccccccccc---ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhH
Q 003926 616 DILLDQNLVAKISSYNLPLLAENAEKV---GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVD 691 (786)
Q Consensus 616 NILld~~~~~kl~DfGl~~~~~~~~~~---~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~ 691 (786)
|++||+...+|++|-.+++..-..... ........||++|.+....|+..+|||||||+||||+| |+.|+.+.+..
T Consensus 426 NCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPf 505 (563)
T KOG1024|consen 426 NCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPF 505 (563)
T ss_pred cceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHH
Confidence 999999999999999998655333221 11122357999999999999999999999999999999 89998877666
Q ss_pred HHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 692 LLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
+....+...... -. +-.|++ ++..++..||+.+|++||+++|++.-|.
T Consensus 506 Em~~ylkdGyRl--------aQ---P~NCPD----eLf~vMacCWallpeeRPsf~Qlv~cLs 553 (563)
T KOG1024|consen 506 EMEHYLKDGYRL--------AQ---PFNCPD----ELFTVMACCWALLPEERPSFSQLVICLS 553 (563)
T ss_pred HHHHHHhcccee--------cC---CCCCcH----HHHHHHHHHHhcCcccCCCHHHHHHHHH
Confidence 554443322111 11 123555 5667888999999999999999997764
|
|
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-32 Score=313.06 Aligned_cols=261 Identities=19% Similarity=0.343 Sum_probs=188.3
Q ss_pred HHHhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC-CCChHHHHHHHHHHhcCCCCCcceeeeeeeecc----
Q 003926 473 EEATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK-CHSTRNFMHHIELISKLRHRHLVSALGHCFECY---- 546 (786)
Q Consensus 473 ~~~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~---- 546 (786)
.+..++|+..+.||+||||.|||++-+ ||+.+|||++.... ........+|+.++++++|||||+++..+.+..
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 456678888999999999999999965 89999999998653 122356789999999999999999987765300
Q ss_pred ---------------------------------------------------cc---------------------------
Q 003926 547 ---------------------------------------------------FD--------------------------- 548 (786)
Q Consensus 547 ---------------------------------------------------~~--------------------------- 548 (786)
.+
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence 00
Q ss_pred ---------------------CC---------CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhh
Q 003926 549 ---------------------DS---------SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQF 598 (786)
Q Consensus 549 ---------------------~~---------~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~y 598 (786)
+. ....+||=||||+.-.+++++++.+... .-...++++.+|+.||.|
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~--~~d~~wrLFreIlEGLaY 712 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS--QRDEAWRLFREILEGLAY 712 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch--hhHHHHHHHHHHHHHHHH
Confidence 00 0034688999999988888887653211 345567899999999999
Q ss_pred hhcCCCCCccccCCCCCceeecCCCcccccCCCcccccc----c---------------ccccccccccccccCcccccc
Q 003926 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE----N---------------AEKVGHVIPYSGSIDPTNSAR 659 (786)
Q Consensus 599 LH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~----~---------------~~~~~~~~~~~~~~aPe~~~~ 659 (786)
+|+. +||||||||.||++|++..+||+|||+++... . ....+...||..|+|||.+..
T Consensus 713 IH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~ 789 (1351)
T KOG1035|consen 713 IHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSD 789 (1351)
T ss_pred HHhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcc
Confidence 9998 99999999999999999999999999986511 0 001234568889999998765
Q ss_pred C---CCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhc
Q 003926 660 G---KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCL 736 (786)
Q Consensus 660 ~---~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl 736 (786)
. +|+.|+|+||+|||++||+. ||+.. ++. ...+... .....+. + .....+....-.+++.+++
T Consensus 790 ~~~~~Yn~KiDmYSLGIVlFEM~y---PF~Ts-MER-a~iL~~L---R~g~iP~---~---~~f~~~~~~~e~slI~~Ll 855 (1351)
T KOG1035|consen 790 TSSNKYNSKIDMYSLGIVLFEMLY---PFGTS-MER-ASILTNL---RKGSIPE---P---ADFFDPEHPEEASLIRWLL 855 (1351)
T ss_pred cccccccchhhhHHHHHHHHHHhc---cCCch-HHH-HHHHHhc---ccCCCCC---C---cccccccchHHHHHHHHHh
Confidence 4 49999999999999999985 34321 111 1111111 0000110 1 1112222233457888999
Q ss_pred cCCCCCCCCHHHHHHH
Q 003926 737 LKNPAERPSVEDVLWN 752 (786)
Q Consensus 737 ~~dP~~RPt~~evl~~ 752 (786)
+.||.+|||+.|++..
T Consensus 856 ~hdP~kRPtA~eLL~s 871 (1351)
T KOG1035|consen 856 SHDPSKRPTATELLNS 871 (1351)
T ss_pred cCCCccCCCHHHHhhc
Confidence 9999999999999853
|
|
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.4e-32 Score=316.50 Aligned_cols=145 Identities=18% Similarity=0.318 Sum_probs=127.4
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCC---hHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHS---TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~---~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|...+.||+|+||.||+|+.. +++.||||+++...... ...+.+|+.+++.++|+||+++++++.. .
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~-------~ 76 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQS-------A 76 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEE-------C
Confidence 56788899999999999999965 68999999997543322 3568899999999999999999987754 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..|+||||+++|+|.+++... ..+++...+.++.|++.||+|||.. +||||||||+|||++.++.+||+|||+
T Consensus 77 ~~~~lVmEy~~g~~L~~li~~~---~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGl 150 (669)
T cd05610 77 NNVYLVMEYLIGGDVKSLLHIY---GYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGL 150 (669)
T ss_pred CEEEEEEeCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCC
Confidence 5789999999999999999753 3578888999999999999999997 999999999999999999999999998
Q ss_pred cc
Q 003926 633 PL 634 (786)
Q Consensus 633 ~~ 634 (786)
++
T Consensus 151 s~ 152 (669)
T cd05610 151 SK 152 (669)
T ss_pred Cc
Confidence 74
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.3e-32 Score=280.65 Aligned_cols=242 Identities=20% Similarity=0.321 Sum_probs=192.2
Q ss_pred cCCCCCceeEEEEec-CCcEEEEEEecccCCC---ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEEEEe
Q 003926 485 MGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH---STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFE 560 (786)
Q Consensus 485 iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~---~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV~E 560 (786)
||+|+||.||++... +++.||+|.+...... ....+.+|++++++++|+||+++++.+.. .+..++|||
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~~~~~v~e 73 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQT-------EEKLYLVLE 73 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeec-------CCeeEEEEe
Confidence 699999999999965 5899999998765432 34578999999999999999999987654 456899999
Q ss_pred cCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccccc-
Q 003926 561 YVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENA- 639 (786)
Q Consensus 561 y~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~- 639 (786)
|+++++|.+++... ..+++.....++.|++.|+.|||+. +++|+||+|+||+++.++.++++|||++......
T Consensus 74 ~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~ 147 (250)
T cd05123 74 YAPGGELFSHLSKE---GRFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG 147 (250)
T ss_pred cCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCC
Confidence 99999999999753 2589999999999999999999996 9999999999999999999999999998654332
Q ss_pred cccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccccccccccc
Q 003926 640 EKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKA 719 (786)
Q Consensus 640 ~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 719 (786)
.......++..|++||......++.++||||||+++|||++|+.||...+.......+ .... ...+.
T Consensus 148 ~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~---~~~~---------~~~~~- 214 (250)
T cd05123 148 SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKI---LKDP---------LRFPE- 214 (250)
T ss_pred CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH---hcCC---------CCCCC-
Confidence 1223344566789999988777899999999999999999999999765432221111 1100 01111
Q ss_pred CcHHHHHHHHHHHHHhccCCCCCCCCH---HHHHHHHHH
Q 003926 720 CLDESLKTMMEVCVRCLLKNPAERPSV---EDVLWNLQF 755 (786)
Q Consensus 720 ~~~~~~~~~~~l~~~Cl~~dP~~RPt~---~evl~~l~~ 755 (786)
.....+.+++.+||..||++||++ .+++.|+||
T Consensus 215 ---~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 215 ---FLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred ---CCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 112356688889999999999999 788877764
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=1e-32 Score=279.38 Aligned_cols=253 Identities=21% Similarity=0.308 Sum_probs=202.5
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~~ 551 (786)
.+|....+||+|+||+|..|..+ +.+.+|||++++.-. .+.+--+.|-++|+-- +-|-+|+++.++..
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQT------- 421 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQT------- 421 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhh-------
Confidence 46888999999999999999865 578999999986532 2223345677777766 56788888876543
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
-+.+|.||||+.+|+|...|+.-. .+.....+.+|..||-||-|||+. +||.||||..||++|.++++||+|||
T Consensus 422 mDRLyFVMEyvnGGDLMyhiQQ~G---kFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFG 495 (683)
T KOG0696|consen 422 MDRLYFVMEYVNGGDLMYHIQQVG---KFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFG 495 (683)
T ss_pred hhheeeEEEEecCchhhhHHHHhc---ccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeecc
Confidence 567999999999999999997632 466778888999999999999998 99999999999999999999999999
Q ss_pred ccccc-ccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 632 LPLLA-ENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 632 l~~~~-~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
+++.. ....+..+.+||+-|+|||++....|+..+|+|||||+||||+.|++||++++.+++...+... .
T Consensus 496 mcKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~eh---n------ 566 (683)
T KOG0696|consen 496 MCKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEH---N------ 566 (683)
T ss_pred cccccccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHc---c------
Confidence 98533 2334556788999999999999999999999999999999999999999988776654332211 0
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCC-----HHHHHHHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPS-----VEDVLWNLQFAAQ 758 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt-----~~evl~~l~~~~~ 758 (786)
-..+....++.++++...+.+.|.+|.- -++|-.|++|...
T Consensus 567 -------vsyPKslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~i 612 (683)
T KOG0696|consen 567 -------VSYPKSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRI 612 (683)
T ss_pred -------CcCcccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhc
Confidence 1123344556778888999999999943 3578888887754
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-31 Score=298.19 Aligned_cols=271 Identities=15% Similarity=0.198 Sum_probs=184.1
Q ss_pred HhcCCCccCccCCCCCceeEEEEe-----------------cCCcEEEEEEecccCCCChHH--------------HHHH
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRL-----------------KNGTFVAIRCLKMKKCHSTRN--------------FMHH 523 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~-----------------~~g~~vAvK~l~~~~~~~~~~--------------f~~E 523 (786)
..++|++.++||+|+||+||+|.. .+++.||||+++.......++ +..|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467899999999999999999964 235689999987543322233 4457
Q ss_pred HHHHhcCCCCCc-----ceeeeeeeeccccC-CCCceEEEEEecCCCCChhHHhhcCCC---------------------
Q 003926 524 IELISKLRHRHL-----VSALGHCFECYFDD-SSVSRIFLIFEYVPNGTLRSWISEGHA--------------------- 576 (786)
Q Consensus 524 ~~~l~~l~H~NI-----v~l~g~~~~~~~~~-~~~~~~~LV~Ey~~~GsL~~~l~~~~~--------------------- 576 (786)
+..+.+++|.++ ++++|+|.....+. ...+..||||||+++|+|.++++....
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777778877654 77888876421111 113468999999999999999874211
Q ss_pred CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccccccccccc--ccccccccCc
Q 003926 577 HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGH--VIPYSGSIDP 654 (786)
Q Consensus 577 ~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~~~~~--~~~~~~~~aP 654 (786)
...++|..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||++........... ...+..|++|
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP 379 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence 12357888899999999999999997 899999999999999999999999999865432221111 1235679999
Q ss_pred cccccCC--------------------C--CcccceeehhHHHHHHHhCCC-CCCCchh-H-HHH---HHHHHHHHhccc
Q 003926 655 TNSARGK--------------------L--EEKIDIYDFGLILLEIIVGRP-LKSRKEV-D-LLK---NQLQAVVTADES 706 (786)
Q Consensus 655 e~~~~~~--------------------~--t~ksDVwSfGvvl~ElltG~~-p~~~~~~-~-~~~---~~~~~~~~~~~~ 706 (786)
|.+.... | ..+.||||+||++|||++|.. |+..... . ... .....+....
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~-- 457 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYK-- 457 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhc--
Confidence 9764322 1 235799999999999999974 5542111 0 000 0000000000
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCC---CCCCCHHHHHHHHHHH
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP---AERPSVEDVLWNLQFA 756 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP---~~RPt~~evl~~l~~~ 756 (786)
....+-. ..+.......+++.+++.++| .+|+|++|+++|+||.
T Consensus 458 --~~~~~~~----~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~ 504 (507)
T PLN03224 458 --GQKYDFS----LLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFL 504 (507)
T ss_pred --ccCCCcc----cccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcC
Confidence 0001111 112223456678888998766 6899999999999974
|
|
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.3e-33 Score=264.14 Aligned_cols=273 Identities=16% Similarity=0.296 Sum_probs=199.3
Q ss_pred CCccCccCCCCCceeEEEEec-CCcEEEEEEeccc--CCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccC-CCCce
Q 003926 479 FDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMK--KCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDD-SSVSR 554 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~-~~~~~ 554 (786)
|.....||+|.||.||+|+.+ +|+.||+|+.-.+ ++.....-++|++++..++|+|++.++..|....-.. .....
T Consensus 19 yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t 98 (376)
T KOG0669|consen 19 YEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRAT 98 (376)
T ss_pred HHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccce
Confidence 344578999999999999965 5888999876443 3334456789999999999999999999996522111 11235
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
+|+||++|+. ||.-+|.+. ...++..+..+++.++..||.|+|++ .|+|||+|+.|+||+.++..||+|||+++
T Consensus 99 ~ylVf~~ceh-DLaGlLsn~--~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFGlar 172 (376)
T KOG0669|consen 99 FYLVFDFCEH-DLAGLLSNR--KVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFGLAR 172 (376)
T ss_pred eeeeHHHhhh-hHHHHhcCc--cccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeecccccc
Confidence 8999999997 999988764 34688889999999999999999998 99999999999999999999999999996
Q ss_pred cccccc-----ccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHH-HHHhcccc
Q 003926 635 LAENAE-----KVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQA-VVTADESA 707 (786)
Q Consensus 635 ~~~~~~-----~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~-~~~~~~~~ 707 (786)
...... .+.....|..|.+||.+.+ ..|+.+.|||.-|||+.||+||.|.++..........+.. ......+.
T Consensus 173 ~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkev 252 (376)
T KOG0669|consen 173 AFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEV 252 (376)
T ss_pred ceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCccc
Confidence 543222 2233344678899998765 4599999999999999999999998876543222222221 11111111
Q ss_pred cccccc---------cccccc---CcHHHHH------HHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 708 RRSMVD---------PAVNKA---CLDESLK------TMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 708 ~~~~~d---------~~~~~~---~~~~~~~------~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
++.+.. +.+... ...+..+ +.++++...+..||.+|+++++++.|-||..
T Consensus 253 WP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~k 320 (376)
T KOG0669|consen 253 WPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWK 320 (376)
T ss_pred CCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhc
Confidence 222111 101111 0112222 5667888999999999999999999998765
|
|
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.5e-32 Score=277.00 Aligned_cols=227 Identities=16% Similarity=0.159 Sum_probs=175.7
Q ss_pred CCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEEEEecCCCCC
Q 003926 488 GSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGT 566 (786)
Q Consensus 488 G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV~Ey~~~Gs 566 (786)
|.||.||+++. .+++.||+|++.... .+.+|...+....||||+++++++.. .+..++||||+++|+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~~~~lv~e~~~~~~ 71 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVS-------EDSVFLVLQHAEGGK 71 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheec-------CCeEEEEEecCCCCC
Confidence 89999999995 478999999987543 34455666666789999999998764 456899999999999
Q ss_pred hhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccccccccccccc
Q 003926 567 LRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVI 646 (786)
Q Consensus 567 L~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~~~~~~~ 646 (786)
|.+++... ..+++.....++.|++.||+|||+. +|+||||||+||+++.++.++++|||.+....... ....
T Consensus 72 L~~~l~~~---~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~--~~~~ 143 (237)
T cd05576 72 LWSHISKF---LNIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC--DGEA 143 (237)
T ss_pred HHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhcccccc--ccCC
Confidence 99998753 3589999999999999999999997 99999999999999999999999999875443221 1223
Q ss_pred ccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccccccCcHHHHH
Q 003926 647 PYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLK 726 (786)
Q Consensus 647 ~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 726 (786)
++..|++||......++.++||||+||++|||++|+.|+....... .. . ....++ .....
T Consensus 144 ~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~---------~~----~---~~~~~~----~~~~~ 203 (237)
T cd05576 144 VENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI---------NT----H---TTLNIP----EWVSE 203 (237)
T ss_pred cCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc---------cc----c---cccCCc----ccCCH
Confidence 3456899999887888999999999999999999998764321100 00 0 000011 11223
Q ss_pred HHHHHHHHhccCCCCCCCCH-----HHHHHHHH
Q 003926 727 TMMEVCVRCLLKNPAERPSV-----EDVLWNLQ 754 (786)
Q Consensus 727 ~~~~l~~~Cl~~dP~~RPt~-----~evl~~l~ 754 (786)
.+.+++.+|++.||++||++ .|++.|+|
T Consensus 204 ~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~ 236 (237)
T cd05576 204 EARSLLQQLLQFNPTERLGAGVAGVEDIKSHPF 236 (237)
T ss_pred HHHHHHHHHccCCHHHhcCCCccchHHHHcCCC
Confidence 56678889999999999996 77777765
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.9e-32 Score=264.87 Aligned_cols=263 Identities=18% Similarity=0.272 Sum_probs=201.7
Q ss_pred CHHHHHHHhcCCCccCccCCCCCceeEEEE-ecCCcEEEEEEecccCCCChHHHHHHHHHHhcCC-CCCcceeeeeeeec
Q 003926 468 SLEELEEATNNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLR-HRHLVSALGHCFEC 545 (786)
Q Consensus 468 ~~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~NIv~l~g~~~~~ 545 (786)
+|+|+-+.|+ +.||+|+||.|-.+. +.+|..+|||++++...+.+....+|++++...+ |+||++++.++.+
T Consensus 74 ~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEd- 147 (463)
T KOG0607|consen 74 KFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFED- 147 (463)
T ss_pred hHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcc-
Confidence 4677776664 789999999999987 7899999999999887777888999999999985 9999999998865
Q ss_pred cccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC--
Q 003926 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL-- 623 (786)
Q Consensus 546 ~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~-- 623 (786)
....|||||-|.+|+|..+|+++ ..++..+.-++..+||.||.|||.. +|.|||+||+|||-....
T Consensus 148 ------d~~FYLVfEKm~GGplLshI~~~---~~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~v 215 (463)
T KOG0607|consen 148 ------DTRFYLVFEKMRGGPLLSHIQKR---KHFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKV 215 (463)
T ss_pred ------cceEEEEEecccCchHHHHHHHh---hhccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCc
Confidence 46789999999999999999874 3588888999999999999999998 999999999999975443
Q ss_pred -cccccCCCcccccccc--------cccccccccccccCccccc-----cCCCCcccceeehhHHHHHHHhCCCCCCCch
Q 003926 624 -VAKISSYNLPLLAENA--------EKVGHVIPYSGSIDPTNSA-----RGKLEEKIDIYDFGLILLEIIVGRPLKSRKE 689 (786)
Q Consensus 624 -~~kl~DfGl~~~~~~~--------~~~~~~~~~~~~~aPe~~~-----~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~ 689 (786)
-+||+||.+..-.... ....+..|...|||||+.. ...|+.+.|.||+|||+|-|++|-+||.+.-
T Consensus 216 sPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~C 295 (463)
T KOG0607|consen 216 SPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHC 295 (463)
T ss_pred CceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCcc
Confidence 3799999986322111 0112345667899999742 2358999999999999999999999985421
Q ss_pred h---------------HHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 690 V---------------DLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 690 ~---------------~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
. ..+.+.++.. ..+..|. .......+..+++...+..|+.+|-++.+++.|+|
T Consensus 296 g~dCGWdrGe~Cr~CQ~~LFesIQEG-------kYeFPdk-----dWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw 363 (463)
T KOG0607|consen 296 GADCGWDRGEVCRVCQNKLFESIQEG-------KYEFPDK-----DWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPW 363 (463)
T ss_pred CCcCCccCCCccHHHHHHHHHHHhcc-------CCcCChh-----hhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCcc
Confidence 0 1111111111 1111111 12233445567778889999999999999999999
Q ss_pred HHHHhh
Q 003926 755 FAAQVQ 760 (786)
Q Consensus 755 ~~~~~~ 760 (786)
+....+
T Consensus 364 ~~~~~~ 369 (463)
T KOG0607|consen 364 VQRCAP 369 (463)
T ss_pred ccccch
Confidence 775444
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.5e-31 Score=323.54 Aligned_cols=277 Identities=32% Similarity=0.476 Sum_probs=261.1
Q ss_pred CEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCC
Q 003926 75 SITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSIL 154 (786)
Q Consensus 75 ~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 154 (786)
+++.|++.+|.+.+.+|. .+.++++|+.|+|++|.+.+.+|..++.+++|+.|+|++|++++.+|..+..+
T Consensus 309 ~L~~L~l~~n~~~~~~~~---------~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~ 379 (968)
T PLN00113 309 NLEILHLFSNNFTGKIPV---------ALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSS 379 (968)
T ss_pred CCcEEECCCCccCCcCCh---------hHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCc
Confidence 678899999887776654 56789999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCCCcCCEEEc
Q 003926 155 TSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDL 233 (786)
Q Consensus 155 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L 233 (786)
++|+.|++++|.+.+.+|..++.+++|+.|+|++|.+++.+|..|.++++|+.|++++|.+++.+|. +..+++|+.|+|
T Consensus 380 ~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 459 (968)
T PLN00113 380 GNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSL 459 (968)
T ss_pred CCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEEC
Confidence 9999999999999999999999999999999999999999999999999999999999999998875 778999999999
Q ss_pred ccCCCCCCCCccc--cchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCccc
Q 003926 234 ENNALGPQFPKVG--KKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKL 311 (786)
Q Consensus 234 ~~N~l~~~~p~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~ 311 (786)
++|.+.+.+|... .+|+.|++++|++++.+|..+.++++|+.|+|++|++.+.+|..+.++++|+.|+|++|.++|.+
T Consensus 460 ~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 539 (968)
T PLN00113 460 ARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQI 539 (968)
T ss_pred cCceeeeecCcccccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccC
Confidence 9999998888753 68999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCCCCC
Q 003926 312 FDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAAGNE 360 (786)
Q Consensus 312 ~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~~~~ 360 (786)
|..+..+++|+.|||++|+++|.+|..+.....+..+++++|.+.|..+
T Consensus 540 p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p 588 (968)
T PLN00113 540 PASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLP 588 (968)
T ss_pred ChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCC
Confidence 9999999999999999999999999999999999999999999987443
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-31 Score=271.60 Aligned_cols=263 Identities=17% Similarity=0.287 Sum_probs=197.1
Q ss_pred CccCccCCCCCceeEEEE-ecCCcEEEEEEecccCC-------CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 480 DTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKC-------HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 480 ~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~-------~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
-....||+|||+.||||. +...+.||||+-...+. ...+...+|..+.+.+.||.||++++|+.- .
T Consensus 466 LlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfsl------D 539 (775)
T KOG1151|consen 466 LLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSL------D 539 (775)
T ss_pred HHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeee------c
Confidence 345689999999999998 56688999997543221 122456889999999999999999998753 1
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC---CCccccc
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ---NLVAKIS 628 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~---~~~~kl~ 628 (786)
.+.+|-|+|||++.+|+-||+.. ..++......|+.||+.||.||.+ +.|+|||-||||.|||+-. .|.+||+
T Consensus 540 tdsFCTVLEYceGNDLDFYLKQh---klmSEKEARSIiMQiVnAL~YLNE-ikpPIIHYDLKPgNILLv~GtacGeIKIT 615 (775)
T KOG1151|consen 540 TDSFCTVLEYCEGNDLDFYLKQH---KLMSEKEARSIIMQIVNALKYLNE-IKPPIIHYDLKPGNILLVNGTACGEIKIT 615 (775)
T ss_pred cccceeeeeecCCCchhHHHHhh---hhhhHHHHHHHHHHHHHHHHHHhc-cCCCeeeeccCCccEEEecCcccceeEee
Confidence 35589999999999999999863 458889999999999999999998 6789999999999999854 4789999
Q ss_pred CCCcccccccccc--------cccccccccccCccccccC----CCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHH
Q 003926 629 SYNLPLLAENAEK--------VGHVIPYSGSIDPTNSARG----KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQ 696 (786)
Q Consensus 629 DfGl~~~~~~~~~--------~~~~~~~~~~~aPe~~~~~----~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~ 696 (786)
|||++++++.... .....|+.+|.+||.+.-+ +++.|+||||.|||.|..+.|+.||+......-...
T Consensus 616 DFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILq 695 (775)
T KOG1151|consen 616 DFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQ 695 (775)
T ss_pred ecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHh
Confidence 9999988864322 1234678889999987654 578999999999999999999999986543211111
Q ss_pred HHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhhhh
Q 003926 697 LQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDA 762 (786)
Q Consensus 697 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~~~ 762 (786)
........+.. +.+ ..... .+..+++.+|++..-++|....++..++.+.......
T Consensus 696 eNTIlkAtEVq----FP~---KPvVs---seAkaFIRRCLaYRKeDR~DV~qLA~dpyllPh~rrs 751 (775)
T KOG1151|consen 696 ENTILKATEVQ----FPP---KPVVS---SEAKAFIRRCLAYRKEDRIDVQQLACDPYLLPHIRRS 751 (775)
T ss_pred hhchhcceecc----CCC---CCccC---HHHHHHHHHHHHhhhhhhhhHHHHccCccccchhhhc
Confidence 11111111100 010 11111 2345677899999999999999999988877654443
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.9e-31 Score=268.95 Aligned_cols=240 Identities=21% Similarity=0.370 Sum_probs=191.6
Q ss_pred CCceeEEEEec-CCcEEEEEEecccCCCC-hHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEEEEecCCCCC
Q 003926 489 SQGQMYRGRLK-NGTFVAIRCLKMKKCHS-TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGT 566 (786)
Q Consensus 489 ~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~-~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV~Ey~~~Gs 566 (786)
+||.||+|... +|+.||+|++....... .+.|.+|++.+++++|+||+++++++.. ....+++|||+++++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-------~~~~~l~~e~~~~~~ 73 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFED-------EDKLYLVMEYCDGGD 73 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheee-------CCEEEEEEeCCCCCC
Confidence 58999999976 58999999998665444 6789999999999999999999998875 356899999999999
Q ss_pred hhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccccccccccccc
Q 003926 567 LRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVI 646 (786)
Q Consensus 567 L~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~~~~~~~ 646 (786)
|.+++.... .+++.....++.++++++.|||.. +++|+||+|+||+++.++.++++|||.+.............
T Consensus 74 L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~ 147 (244)
T smart00220 74 LFDLLKKRG---RLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFV 147 (244)
T ss_pred HHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccccccccc
Confidence 999997532 288999999999999999999997 99999999999999999999999999986654432333445
Q ss_pred ccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCC-chhHHHHHHHHHHHHhccccccccccccccccCcHHHH
Q 003926 647 PYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSR-KEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESL 725 (786)
Q Consensus 647 ~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 725 (786)
+...|++||......++.++||||||+++|||++|+.|+.. .+.......... .. ...... . ....
T Consensus 148 ~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~---~~----~~~~~~---~---~~~~ 214 (244)
T smart00220 148 GTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGK---PK----PPFPPP---E---WKIS 214 (244)
T ss_pred CCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhc---cC----CCCccc---c---ccCC
Confidence 56778999998878889999999999999999999999866 333322222111 00 000000 0 0022
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 726 KTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 726 ~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
..+.+++.+|+..+|++||++.|++++.|
T Consensus 215 ~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~ 243 (244)
T smart00220 215 PEAKDLIRKLLVKDPEKRLTAEEALQHPF 243 (244)
T ss_pred HHHHHHHHHHccCCchhccCHHHHhhCCC
Confidence 45778889999999999999999998765
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-31 Score=303.02 Aligned_cols=263 Identities=17% Similarity=0.244 Sum_probs=199.6
Q ss_pred HHHHHHhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEeccc---CCCChHHHHHHHHHHhcCCCCCcceeeeeeeec
Q 003926 470 EELEEATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMK---KCHSTRNFMHHIELISKLRHRHLVSALGHCFEC 545 (786)
Q Consensus 470 ~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~ 545 (786)
.++.-..++|.+.++||+|+||.|...+++ +++++|.|++.+. +.....-|..|-.+|..-+.+.||.++-.+.+
T Consensus 68 ~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD- 146 (1317)
T KOG0612|consen 68 KELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD- 146 (1317)
T ss_pred HHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC-
Confidence 345555678999999999999999999975 6899999999763 33345568889999999999999998754432
Q ss_pred cccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcc
Q 003926 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVA 625 (786)
Q Consensus 546 ~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~ 625 (786)
..++|+|||||+||||-.++.+.. .++..-...++..|+-||.-+|+. |+|||||||.|||||..|++
T Consensus 147 ------~~~LYlVMdY~pGGDlltLlSk~~---~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHi 214 (1317)
T KOG0612|consen 147 ------ERYLYLVMDYMPGGDLLTLLSKFD---RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHI 214 (1317)
T ss_pred ------ccceEEEEecccCchHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcE
Confidence 567999999999999999998643 466666677888999999999998 99999999999999999999
Q ss_pred cccCCCccccccccc--ccccccccccccCcccccc-----CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHH
Q 003926 626 KISSYNLPLLAENAE--KVGHVIPYSGSIDPTNSAR-----GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQ 698 (786)
Q Consensus 626 kl~DfGl~~~~~~~~--~~~~~~~~~~~~aPe~~~~-----~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~ 698 (786)
|++|||-+..+.... ......||+-|++||++.. +.|+..+|+||+||++|||+.|..||..... ...+.
T Consensus 215 kLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadsl---veTY~ 291 (1317)
T KOG0612|consen 215 KLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSL---VETYG 291 (1317)
T ss_pred eeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHH---HHHHH
Confidence 999999985443222 3445679999999998642 5699999999999999999999999975432 22222
Q ss_pred HHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCC---HHHHHHHHHHHHH
Q 003926 699 AVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPS---VEDVLWNLQFAAQ 758 (786)
Q Consensus 699 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt---~~evl~~l~~~~~ 758 (786)
....+.+. -...| . ........+++.+.+ .+|+.|.. ..|+-.|+||...
T Consensus 292 KIm~hk~~--l~FP~-~------~~VSeeakdLI~~ll-~~~e~RLgrngiedik~HpFF~g~ 344 (1317)
T KOG0612|consen 292 KIMNHKES--LSFPD-E------TDVSEEAKDLIEALL-CDREVRLGRNGIEDIKNHPFFEGI 344 (1317)
T ss_pred HHhchhhh--cCCCc-c------cccCHHHHHHHHHHh-cChhhhcccccHHHHHhCccccCC
Confidence 22222110 00100 0 012233445555533 47888888 9999999998864
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-31 Score=287.93 Aligned_cols=242 Identities=18% Similarity=0.249 Sum_probs=190.4
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCCCCc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
++.|.....+|+|+|+.|-++.. .+++..|||++..... +-.+|+.++.+. +||||+++.+.+.+ ..
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~----~~~~e~~~~~~~~~h~niv~~~~v~~~-------~~ 389 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD----DNQDEIPISLLVRDHPNIVKSHDVYED-------GK 389 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheecccccc----ccccccchhhhhcCCCcceeecceecC-------Cc
Confidence 56777788899999999999984 5789999999986632 223566666655 79999999998865 45
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceee-cCCCcccccCCCc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL-DQNLVAKISSYNL 632 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILl-d~~~~~kl~DfGl 632 (786)
+.|+|||++.+|-+.+.+.... ... ..+..++.+++.|+.|||+. ++|||||||+|||+ +..++++|+|||.
T Consensus 390 ~~~~v~e~l~g~ell~ri~~~~---~~~-~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~ 462 (612)
T KOG0603|consen 390 EIYLVMELLDGGELLRRIRSKP---EFC-SEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGF 462 (612)
T ss_pred eeeeeehhccccHHHHHHHhcc---hhH-HHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEech
Confidence 7899999999998888776532 122 66777999999999999997 99999999999999 5889999999999
Q ss_pred ccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhH-HHHHHHHHHHHhcccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVD-LLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 711 (786)
++..... ..+.+-+..|.|||......||+++|||||||+||||++|+.|+.....+ ++...++ .
T Consensus 463 a~~~~~~--~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~---~--------- 528 (612)
T KOG0603|consen 463 WSELERS--CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQ---M--------- 528 (612)
T ss_pred hhhCchh--hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhc---C---------
Confidence 8766443 22334567899999999889999999999999999999999999765443 2221111 0
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
+... ........+++.+||+.||.+||+|+|+..|.|+
T Consensus 529 --~~~s----~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 529 --PKFS----ECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred --Cccc----cccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 1000 1223345678889999999999999999999997
|
|
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-31 Score=276.34 Aligned_cols=250 Identities=16% Similarity=0.249 Sum_probs=202.2
Q ss_pred cCccCCCCCceeEEEEe-cCCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEEE
Q 003926 482 SAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLI 558 (786)
Q Consensus 482 ~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV 558 (786)
.++||.|.||+||-|.. ++|+.||||.+++.... ...+..+|+.+|.+++||.||.+.-.|.. .+..++|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET-------~ervFVV 641 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFET-------PERVFVV 641 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecC-------CceEEEE
Confidence 47899999999999985 57999999999876543 34678999999999999999998876654 5679999
Q ss_pred EecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCC---CcccccCCCcccc
Q 003926 559 FEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN---LVAKISSYNLPLL 635 (786)
Q Consensus 559 ~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~---~~~kl~DfGl~~~ 635 (786)
||-+. ||.-+.|-.. ++..|+......+..||.-||.|||.. +|+|+||||+|||+... -.+||+|||++++
T Consensus 642 MEKl~-GDMLEMILSs-EkgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARi 716 (888)
T KOG4236|consen 642 MEKLH-GDMLEMILSS-EKGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARI 716 (888)
T ss_pred ehhhc-chHHHHHHHh-hcccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceee
Confidence 99995 5766665432 234688888888899999999999997 99999999999999754 3689999999998
Q ss_pred cccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccccccc
Q 003926 636 AENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPA 715 (786)
Q Consensus 636 ~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 715 (786)
...........||+.|.|||++....|...-|+||.|||+|.-++|..||... +++.++++.+... ..|.
T Consensus 717 IgEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd--EdIndQIQNAaFM--------yPp~ 786 (888)
T KOG4236|consen 717 IGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED--EDINDQIQNAAFM--------YPPN 786 (888)
T ss_pred cchhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc--cchhHHhhccccc--------cCCC
Confidence 87766666778999999999999999999999999999999999999999643 2344444432111 1111
Q ss_pred ccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 716 VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 716 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
...+.....++++...++..-.+|.+..+.+.|+|...
T Consensus 787 ----PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~ 824 (888)
T KOG4236|consen 787 ----PWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQD 824 (888)
T ss_pred ----chhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhc
Confidence 12344456678888999999999999999999998653
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.2e-31 Score=299.98 Aligned_cols=273 Identities=16% Similarity=0.153 Sum_probs=173.1
Q ss_pred HhcCCCccCccCCCCCceeEEEEec-C----CcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccC
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLK-N----GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDD 549 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~-~----g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~ 549 (786)
..++|+..+.||+|+||.||+|+.. + +..||||++.... ..+.+..| .+....+.+++.+...+..... .
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~--~~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~-~ 204 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYG--AVEIWMNE--RVRRACPNSCADFVYGFLEPVS-S 204 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccc--hhHHHHHH--HHHhhchhhHHHHHHhhhcccc-c
Confidence 4678999999999999999999965 4 7899999876432 12222222 2223334444433322211110 1
Q ss_pred CCCceEEEEEecCCCCChhHHhhcCCCC-----------------CCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCC
Q 003926 550 SSVSRIFLIFEYVPNGTLRSWISEGHAH-----------------QSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNL 612 (786)
Q Consensus 550 ~~~~~~~LV~Ey~~~GsL~~~l~~~~~~-----------------~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdl 612 (786)
......++||||+++|+|.+++...... ..........++.|+++||+|||+. +|+||||
T Consensus 205 ~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDL 281 (566)
T PLN03225 205 KKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDV 281 (566)
T ss_pred ccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcC
Confidence 2346789999999999999998753210 0011233457899999999999997 9999999
Q ss_pred CCCceeecC-CCcccccCCCccccccccc--ccccccccccccCccccccC----------------------CCCcccc
Q 003926 613 KITDILLDQ-NLVAKISSYNLPLLAENAE--KVGHVIPYSGSIDPTNSARG----------------------KLEEKID 667 (786)
Q Consensus 613 k~~NILld~-~~~~kl~DfGl~~~~~~~~--~~~~~~~~~~~~aPe~~~~~----------------------~~t~ksD 667 (786)
||+|||++. ++.+||+|||+++...... ......++..|+|||..... .++.++|
T Consensus 282 KP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~D 361 (566)
T PLN03225 282 KPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFD 361 (566)
T ss_pred CHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcc
Confidence 999999996 5789999999996543221 11234566789999954221 2456779
Q ss_pred eeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccccc------cCcHHHHHHHHHHHHHhccCCCC
Q 003926 668 IYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNK------ACLDESLKTMMEVCVRCLLKNPA 741 (786)
Q Consensus 668 VwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~------~~~~~~~~~~~~l~~~Cl~~dP~ 741 (786)
||||||++|||+++..+.+... ......+..... ....+....++.... ...+.......+++.+|++.||+
T Consensus 362 VwSlGviL~el~~~~~~~~~~~-~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~ 439 (566)
T PLN03225 362 IYSAGLIFLQMAFPNLRSDSNL-IQFNRQLKRNDY-DLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGR 439 (566)
T ss_pred cHHHHHHHHHHHhCcCCCchHH-HHHHHHHHhcCC-cHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcc
Confidence 9999999999999876654321 111111111000 000011111111000 00011112345788899999999
Q ss_pred CCCCHHHHHHHHHHHH
Q 003926 742 ERPSVEDVLWNLQFAA 757 (786)
Q Consensus 742 ~RPt~~evl~~l~~~~ 757 (786)
+|||+.|+++|+||..
T Consensus 440 kR~ta~e~L~Hpff~~ 455 (566)
T PLN03225 440 QRISAKAALAHPYFDR 455 (566)
T ss_pred cCCCHHHHhCCcCcCC
Confidence 9999999999999764
|
|
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-30 Score=262.07 Aligned_cols=268 Identities=17% Similarity=0.216 Sum_probs=201.2
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCC------Ccceeeeeeeecccc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHR------HLVSALGHCFECYFD 548 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~------NIv~l~g~~~~~~~~ 548 (786)
++.|.+...+|+|.||.|-++.. +.+..||||+++.-. ...+.-+-|++++.++.+. -+|.+.+++..
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdy---- 162 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDY---- 162 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhc----
Confidence 67788899999999999999984 458999999997543 3456677899999999432 36666665543
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC-------
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ------- 621 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~------- 621 (786)
.++.|+|+|.+. -|+.++|.+.. ..+++..+...|+.|++++++|||+. +++|-||||+|||+-.
T Consensus 163 ---rghiCivfellG-~S~~dFlk~N~-y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~~ 234 (415)
T KOG0671|consen 163 ---RGHICIVFELLG-LSTFDFLKENN-YIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKTY 234 (415)
T ss_pred ---cCceEEEEeccC-hhHHHHhccCC-ccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEEe
Confidence 567999999994 49999998743 35788899999999999999999998 9999999999999742
Q ss_pred -------------CCcccccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCc
Q 003926 622 -------------NLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRK 688 (786)
Q Consensus 622 -------------~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~ 688 (786)
+..+||.|||-|....... .....|..|.|||++.+-.++.++||||+||||.|+.||...|+..
T Consensus 235 ~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h--s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtH 312 (415)
T KOG0671|consen 235 NPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH--STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTH 312 (415)
T ss_pred ccCCccceeccCCCcceEEEecCCcceeccCc--ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccC
Confidence 2346899999987654433 4456788999999999999999999999999999999999887654
Q ss_pred hhHHHHHHHHHHHHhcccc-----------------c---------cccccccc----cccCcHHHHHHHHHHHHHhccC
Q 003926 689 EVDLLKNQLQAVVTADESA-----------------R---------RSMVDPAV----NKACLDESLKTMMEVCVRCLLK 738 (786)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~~-----------------~---------~~~~d~~~----~~~~~~~~~~~~~~l~~~Cl~~ 738 (786)
+..+-...++......+.. + +...++.. ...+.+++..++++++.+++..
T Consensus 313 en~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~f 392 (415)
T KOG0671|consen 313 ENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEF 392 (415)
T ss_pred CcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHcc
Confidence 3211112222222111100 0 00111110 0122355667899999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHH
Q 003926 739 NPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 739 dP~~RPt~~evl~~l~~~~~ 758 (786)
||.+|+|++|++.|++|+..
T Consensus 393 DP~~RiTl~EAL~HpFF~~~ 412 (415)
T KOG0671|consen 393 DPARRITLREALSHPFFARL 412 (415)
T ss_pred CccccccHHHHhcCHHhhcC
Confidence 99999999999999999864
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-30 Score=270.68 Aligned_cols=259 Identities=16% Similarity=0.220 Sum_probs=210.0
Q ss_pred cCCCccCccCCCCCceeEEEEecCC-cEEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKNG-TFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~g-~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.+++....||-||||.|=....+.. ..+|+|++++... ...+....|-.+|...+.|.||+++--+.+ .
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd-------~ 492 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRD-------S 492 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhcc-------c
Confidence 3445567899999999999887643 3589999886643 334567889999999999999999876654 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
.+.|+.||-|-+|.|...|+++ ..++......++..+.+|++|||+. +||.|||||+|.++|.+|.+|+.|||+
T Consensus 493 kyvYmLmEaClGGElWTiLrdR---g~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGF 566 (732)
T KOG0614|consen 493 KYVYMLMEACLGGELWTILRDR---GSFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGF 566 (732)
T ss_pred hhhhhhHHhhcCchhhhhhhhc---CCcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhh
Confidence 5689999999999999999864 3688888888999999999999998 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
|+......+.-+.+||+.|.|||++....-+..+|.||+||++|||+||+|||...+.......+-..+...
T Consensus 567 AKki~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i-------- 638 (732)
T KOG0614|consen 567 AKKIGSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKI-------- 638 (732)
T ss_pred HHHhccCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhh--------
Confidence 998887777778899999999999988888999999999999999999999998876654444433222111
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCC-----HHHHHHHHHHHHHhhhh
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPS-----VEDVLWNLQFAAQVQDA 762 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt-----~~evl~~l~~~~~~~~~ 762 (786)
+++....+...+++.+.+..+|.+|-- +.||-+|-||.....+.
T Consensus 639 ------~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdweg 687 (732)
T KOG0614|consen 639 ------EFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDWEG 687 (732)
T ss_pred ------hcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCChhh
Confidence 112223345556777888899999975 88999999998754333
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.5e-30 Score=240.82 Aligned_cols=268 Identities=16% Similarity=0.247 Sum_probs=202.0
Q ss_pred hcCCCccCccCCCCCceeEEEE-ecCCcEEEEEEecccCCCChHHHHHHHHHHhcCC-CCCcceeeeeeeeccccCCCCc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLR-HRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
.++|++.+.+|+|.|++||.|. ..+.+.++||.++..+ .+.+.+|+.+|..++ |||||++++...+ +...
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~DiV~D-----p~Sk 108 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLDIVKD-----PESK 108 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhhhhcC-----cccc
Confidence 4567888999999999999998 6678899999998654 567899999999997 9999999998754 2334
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCC-CcccccCCCc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN-LVAKISSYNL 632 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~-~~~kl~DfGl 632 (786)
...||+||+.+-+...+.. .++-.....+..++.+||.|+|+. ||+|||+||.|+++|.. ...++.|+|+
T Consensus 109 tpaLiFE~v~n~Dfk~ly~------tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGL 179 (338)
T KOG0668|consen 109 TPSLIFEYVNNTDFKQLYP------TLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGL 179 (338)
T ss_pred CchhHhhhhccccHHHHhh------hhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecch
Confidence 5689999999988776653 366677788899999999999998 99999999999999965 5689999999
Q ss_pred ccccccccccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCC--chhHHHHHHHHHHHHhcc----
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSR--KEVDLLKNQLQAVVTADE---- 705 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~--~~~~~~~~~~~~~~~~~~---- 705 (786)
|.+............+.++-.||.+.. ..|+..-|+|||||++.+|+..+.||-. .+.+++.+++.......-
T Consensus 180 AEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl 259 (338)
T KOG0668|consen 180 AEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYL 259 (338)
T ss_pred HhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHH
Confidence 987766665555555667788998755 4588999999999999999999988633 334555444333221110
Q ss_pred ccccccccccccc----------------cCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 003926 706 SARRSMVDPAVNK----------------ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760 (786)
Q Consensus 706 ~~~~~~~d~~~~~----------------~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~ 760 (786)
....-.+||.... +-..-...+.++++.+.+..|-.+|||++|.+.|++|....+
T Consensus 260 ~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~~~ 330 (338)
T KOG0668|consen 260 NKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPVRE 330 (338)
T ss_pred HHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHHHH
Confidence 0000012222110 000011245677888999999999999999999999987544
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.1e-30 Score=237.30 Aligned_cols=205 Identities=15% Similarity=0.266 Sum_probs=161.7
Q ss_pred HHHhcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCC-ChHHHHHHHHHHhc-CCCCCcceeeeeeeeccccC
Q 003926 473 EEATNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCH-STRNFMHHIELISK-LRHRHLVSALGHCFECYFDD 549 (786)
Q Consensus 473 ~~~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~-l~H~NIv~l~g~~~~~~~~~ 549 (786)
+...++......||+|+||.|-+-++ .+|+..|||++...-.. ..+..++|+.+..+ ...|.+|.|+|....
T Consensus 42 eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~r----- 116 (282)
T KOG0984|consen 42 EVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFR----- 116 (282)
T ss_pred ccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhc-----
Confidence 33444455568899999999988884 57999999999866432 34567888886555 579999999997654
Q ss_pred CCCceEEEEEecCCCCChhHHhhcC-CCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCccccc
Q 003926 550 SSVSRIFLIFEYVPNGTLRSWISEG-HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKIS 628 (786)
Q Consensus 550 ~~~~~~~LV~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~ 628 (786)
....|+.||.|.- ||+.+-.+. +....+++...=+||..|.+||.|||+. ..+||||+||+|||++.+|.+|+|
T Consensus 117 --egdvwIcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~k--L~vIHRDvKPsNiLIn~~GqVKiC 191 (282)
T KOG0984|consen 117 --EGDVWICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSK--LSVIHRDVKPSNILINYDGQVKIC 191 (282)
T ss_pred --cccEEEeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHH--hhhhhccCCcceEEEccCCcEEEc
Confidence 3458999999975 887765431 1234678888889999999999999997 489999999999999999999999
Q ss_pred CCCcccccccccccccccccccccCcccccc----CCCCcccceeehhHHHHHHHhCCCCCCC
Q 003926 629 SYNLPLLAENAEKVGHVIPYSGSIDPTNSAR----GKLEEKIDIYDFGLILLEIIVGRPLKSR 687 (786)
Q Consensus 629 DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~----~~~t~ksDVwSfGvvl~ElltG~~p~~~ 687 (786)
|||++-...+.-......|...|||||.+.. ..|+.|+||||+|+++.||.+++.|++.
T Consensus 192 DFGIsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~ 254 (282)
T KOG0984|consen 192 DFGISGYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYES 254 (282)
T ss_pred ccccceeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccc
Confidence 9999865544333333445667999997643 3689999999999999999999999865
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.9e-29 Score=276.07 Aligned_cols=248 Identities=22% Similarity=0.295 Sum_probs=182.8
Q ss_pred CCCccCccCCCCCce-eEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCCCCceE
Q 003926 478 NFDTSAFMGEGSQGQ-MYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~-Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
-|...+++|.|+-|+ ||+|.++ |+.||||++-... ..-..+||..|+.- +|||||++++.-. .....
T Consensus 510 ~~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~-------d~qF~ 578 (903)
T KOG1027|consen 510 FFSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQ-------DRQFL 578 (903)
T ss_pred eeccHHHcccCCCCcEEEEEeeC-CceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeecc-------CCceE
Confidence 356667899999996 8999997 7899999986443 22346899999887 6999999976432 35679
Q ss_pred EEEEecCCCCChhHHhhcC-CCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC-----CCcccccC
Q 003926 556 FLIFEYVPNGTLRSWISEG-HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ-----NLVAKISS 629 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~-----~~~~kl~D 629 (786)
||..|.|.. +|.+++... .......-...+.+..|+++|+++||+. +||||||||.||||+. ...++|+|
T Consensus 579 YIalELC~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSD 654 (903)
T KOG1027|consen 579 YIALELCAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISD 654 (903)
T ss_pred EEEehHhhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecc
Confidence 999999976 999999763 1111111134466788999999999996 9999999999999976 25799999
Q ss_pred CCcccccccccc----cccccccccccCccccccCCCCcccceeehhHHHHHHHhC-CCCCCCchhHHHHHHHHHHHHhc
Q 003926 630 YNLPLLAENAEK----VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVG-RPLKSRKEVDLLKNQLQAVVTAD 704 (786)
Q Consensus 630 fGl~~~~~~~~~----~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG-~~p~~~~~~~~~~~~~~~~~~~~ 704 (786)
||+++....... .....|+.+|+|||.+....-+..+||+|+|||+|..++| +.||++.-..+ .+++.. .
T Consensus 655 fglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~-~NIl~~----~ 729 (903)
T KOG1027|consen 655 FGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ-ANILTG----N 729 (903)
T ss_pred cccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhh-hhhhcC----c
Confidence 999976644332 2345678899999999888888899999999999999996 89997542211 011110 0
Q ss_pred cccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 705 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
...+.- ..-.+. ...+++.+++..+|..||++.+|+.|+.|
T Consensus 730 ----~~L~~L---~~~~d~---eA~dLI~~ml~~dP~~RPsa~~VL~HPlF 770 (903)
T KOG1027|consen 730 ----YTLVHL---EPLPDC---EAKDLISRMLNPDPQLRPSATDVLNHPLF 770 (903)
T ss_pred ----cceeee---ccCchH---HHHHHHHHhcCCCcccCCCHHHHhCCCcc
Confidence 000000 000111 55688889999999999999999988753
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.2e-29 Score=247.00 Aligned_cols=258 Identities=19% Similarity=0.265 Sum_probs=196.3
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCCh---HHHHHHHHHHhcC-CCCCcceeeeeeeeccccCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHST---RNFMHHIELISKL-RHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~---~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~ 550 (786)
.++|+..++||+|+|++|..++++ +.+.+|+|++++.-.... .=...|-.+..+. +||.+|.+..++..
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqt------ 322 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQT------ 322 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcc------
Confidence 467899999999999999999964 689999999987643322 2234565666554 79999999876543
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
...++.|.||+++|+|.-+++.+ .+++......+...|.-||.|||+. +||.||||..|||+|..+++|++||
T Consensus 323 -esrlffvieyv~ggdlmfhmqrq---rklpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdy 395 (593)
T KOG0695|consen 323 -ESRLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDY 395 (593)
T ss_pred -cceEEEEEEEecCcceeeehhhh---hcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeeccc
Confidence 56799999999999998888753 4688888888999999999999998 9999999999999999999999999
Q ss_pred Cccccc-ccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCch----hHHHHHHHHHHHHhcc
Q 003926 631 NLPLLA-ENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKE----VDLLKNQLQAVVTADE 705 (786)
Q Consensus 631 Gl~~~~-~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~----~~~~~~~~~~~~~~~~ 705 (786)
|+.+.. .......+.+|++.|+|||.+.+..|...+|+|++||+++||+.|+.||+--. .+....++-.++.+..
T Consensus 396 gmcke~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekq 475 (593)
T KOG0695|consen 396 GMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQ 475 (593)
T ss_pred chhhcCCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhc
Confidence 998643 34455667889999999999999999999999999999999999999986321 1111111111111111
Q ss_pred ccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCC------CHHHHHHHHHHHHH
Q 003926 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERP------SVEDVLWNLQFAAQ 758 (786)
Q Consensus 706 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP------t~~evl~~l~~~~~ 758 (786)
+--| .......-.+....+.+||.+|. .++++-.|.+|...
T Consensus 476 -----irip-------rslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~i 522 (593)
T KOG0695|consen 476 -----IRIP-------RSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSI 522 (593)
T ss_pred -----cccc-------ceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhC
Confidence 0001 11112333455678899999994 47788888887743
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-28 Score=260.86 Aligned_cols=199 Identities=17% Similarity=0.278 Sum_probs=163.4
Q ss_pred cCCCccCccCCCCCceeEEEE-ecCCcEEEEEEecccCCC---ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCH---STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~---~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.-|...+.||-|+||+|..++ .++...+|.|.+++.+.- .......|-.||.....+.||+|+-.+.+ .
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQD-------k 701 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQD-------K 701 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEecc-------C
Confidence 347778899999999999997 566889999999876542 23456788999999999999999855443 5
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+.+|+||||++|||+..+|-+. ..+.+.....++.+++-|+++.|.. ++|||||||.|||||.+|++||+||||
T Consensus 702 dnLYFVMdYIPGGDmMSLLIrm---gIFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGL 775 (1034)
T KOG0608|consen 702 DNLYFVMDYIPGGDMMSLLIRM---GIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGL 775 (1034)
T ss_pred CceEEEEeccCCccHHHHHHHh---ccCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeeccc
Confidence 6799999999999999988653 3466666667778899999999998 999999999999999999999999999
Q ss_pred cccc---------ccccc----------------------------------cccccccccccCccccccCCCCccccee
Q 003926 633 PLLA---------ENAEK----------------------------------VGHVIPYSGSIDPTNSARGKLEEKIDIY 669 (786)
Q Consensus 633 ~~~~---------~~~~~----------------------------------~~~~~~~~~~~aPe~~~~~~~t~ksDVw 669 (786)
+.-. ..+.. .....|++.|+|||++....|+.-+|+|
T Consensus 776 CTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdww 855 (1034)
T KOG0608|consen 776 CTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWW 855 (1034)
T ss_pred cccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhh
Confidence 7321 00000 0113478899999999999999999999
Q ss_pred ehhHHHHHHHhCCCCCCCc
Q 003926 670 DFGLILLEIIVGRPLKSRK 688 (786)
Q Consensus 670 SfGvvl~ElltG~~p~~~~ 688 (786)
|.|||||||+.|++||-..
T Consensus 856 s~gvil~em~~g~~pf~~~ 874 (1034)
T KOG0608|consen 856 SVGVILYEMLVGQPPFLAD 874 (1034)
T ss_pred HhhHHHHHHhhCCCCccCC
Confidence 9999999999999998653
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.6e-29 Score=267.49 Aligned_cols=257 Identities=19% Similarity=0.318 Sum_probs=200.3
Q ss_pred HhcCCCccCccCCCCCceeEEEE-ecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
..++|+....+|.|.||.||||+ ..+++..|||.++..-........+|+-+++..+|+|||.++|-+.. .+
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr-------~d 85 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLR-------RD 85 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhh-------hc
Confidence 35678888999999999999999 45799999999998766666777889999999999999999998764 45
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..|+.||||.+|+|++.-+- -.+++..+....+....+|++|||+. +-+|||||-.|||+.+.+.+|++|||.+
T Consensus 86 klwicMEycgggslQdiy~~---TgplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvs 159 (829)
T KOG0576|consen 86 KLWICMEYCGGGSLQDIYHV---TGPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVS 159 (829)
T ss_pred CcEEEEEecCCCcccceeee---cccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCch
Confidence 68999999999999998764 24688888888999999999999997 8889999999999999999999999997
Q ss_pred cccc-cccccccccccccccCccccc---cCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 634 LLAE-NAEKVGHVIPYSGSIDPTNSA---RGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 634 ~~~~-~~~~~~~~~~~~~~~aPe~~~---~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
-... ...+.....|+++|||||+.. .+.|.+++|||+.|+...|+-.-++|.-+.........+. .
T Consensus 160 aqitati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmT----------k 229 (829)
T KOG0576|consen 160 AQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMT----------K 229 (829)
T ss_pred hhhhhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhh----------c
Confidence 4432 223445678999999999753 4569999999999999999988787744333222111111 1
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
+.++|....+ .......+-+++..|+.++|++||++...++|.+.
T Consensus 230 S~~qpp~lkD-k~kws~~fh~fvK~altknpKkRptaeklL~h~fv 274 (829)
T KOG0576|consen 230 SGFQPPTLKD-KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFV 274 (829)
T ss_pred cCCCCCcccC-CccchHHHHHHHHHHhcCCCccCCChhhheeceee
Confidence 1122211110 11222345677778999999999999999887653
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-28 Score=237.60 Aligned_cols=270 Identities=19% Similarity=0.279 Sum_probs=191.5
Q ss_pred CCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 479 FDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
.+..+.||-|+||+||..+. ++|+.||.|++..-.. ...+.+.+|.+++..++|.|++..++.-.-... .-..++
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~--dfFqEi 132 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANP--SFFQEL 132 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCc--hHHHHH
Confidence 34568899999999999985 4799999998864322 235779999999999999999998876432111 112467
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
|+|.|.|.. ||..+|-. .+.++-.....+..||.+||.|||+. +|.||||||.|.|++.+-..||+|||+++.
T Consensus 133 YV~TELmQS-DLHKIIVS---PQ~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARv 205 (449)
T KOG0664|consen 133 YVLTELMQS-DLHKIIVS---PQALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLART 205 (449)
T ss_pred HHHHHHHHh-hhhheecc---CCCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccc
Confidence 899999975 88888764 34688888888899999999999998 999999999999999999999999999986
Q ss_pred ccccc--ccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCchh-HHHHHHHHHHH--------Hh
Q 003926 636 AENAE--KVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVV--------TA 703 (786)
Q Consensus 636 ~~~~~--~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~~~-~~~~~~~~~~~--------~~ 703 (786)
.+..+ .......+-+|.|||.+.+. .|+...||||.||+..|++-++-.|..... +.+..+..... ..
T Consensus 206 ee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~A 285 (449)
T KOG0664|consen 206 WDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYA 285 (449)
T ss_pred cchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHH
Confidence 65432 22333446689999998764 599999999999999999988877765332 22221111111 11
Q ss_pred cccccccc-----cccccc--c--cCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 704 DESARRSM-----VDPAVN--K--ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 704 ~~~~~~~~-----~d~~~~--~--~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
-++....+ ..|... . ..++..-.+.+.+.+..+..||++|.+..+.+.|+...+
T Consensus 286 CEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e 348 (449)
T KOG0664|consen 286 CEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEE 348 (449)
T ss_pred hhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccc
Confidence 11111111 111110 0 011111223445666788999999999999998887543
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.6e-26 Score=229.11 Aligned_cols=210 Identities=27% Similarity=0.513 Sum_probs=176.5
Q ss_pred cCCCCCceeEEEEec-CCcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEEEEecC
Q 003926 485 MGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYV 562 (786)
Q Consensus 485 iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV~Ey~ 562 (786)
||+|++|.||+++.. +++.+++|++...... ..+.+.+|++.+++++|++|+++++++.. ....+++|||+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-------~~~~~~~~e~~ 73 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFED-------ENHLYLVMEYC 73 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeec-------CCeEEEEEecC
Confidence 689999999999975 4899999998765432 34679999999999999999999998864 25689999999
Q ss_pred CCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC-CCcccccCCCccccccccc-
Q 003926 563 PNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ-NLVAKISSYNLPLLAENAE- 640 (786)
Q Consensus 563 ~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~-~~~~kl~DfGl~~~~~~~~- 640 (786)
++++|.+++.... ..+++..+..++.+++++++|||+. +++|+||+|.||+++. +..++++|||.+.......
T Consensus 74 ~~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~ 148 (215)
T cd00180 74 EGGSLKDLLKENE--GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS 148 (215)
T ss_pred CCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc
Confidence 9999999997532 3589999999999999999999997 9999999999999999 8999999999986543321
Q ss_pred ccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccccccccccc
Q 003926 641 KVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKA 719 (786)
Q Consensus 641 ~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 719 (786)
..........|++||..... .++.+.|+|++|++++||
T Consensus 149 ~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l----------------------------------------- 187 (215)
T cd00180 149 LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL----------------------------------------- 187 (215)
T ss_pred hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-----------------------------------------
Confidence 11223355678899988776 788999999999999998
Q ss_pred CcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 003926 720 CLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNL 753 (786)
Q Consensus 720 ~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l 753 (786)
..+.+++.+|++.+|++||++.++++++
T Consensus 188 ------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 ------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred ------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 1345677899999999999999998753
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-25 Score=229.10 Aligned_cols=197 Identities=24% Similarity=0.421 Sum_probs=166.8
Q ss_pred CCccCccCCCCCceeEEEEecC-CcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEE
Q 003926 479 FDTSAFMGEGSQGQMYRGRLKN-GTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~ 556 (786)
|+..+.||+|++|.||+|...+ +..+|+|.+...... ..+.+.+|++.+++++|+|++++++++.. ....+
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~-------~~~~~ 73 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFED-------PEPLY 73 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeec-------CCceE
Confidence 4556889999999999999764 899999999866544 56789999999999999999999998764 35689
Q ss_pred EEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccc
Q 003926 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636 (786)
Q Consensus 557 LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~ 636 (786)
+++||+++++|.+++..... .+++.....++.++++++.|||.. +++|+|++++||+++.++.++++|||.+...
T Consensus 74 ~v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~ 148 (225)
T smart00221 74 LVMEYCEGGDLFDYLRKKGG--KLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFI 148 (225)
T ss_pred EEEeccCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEe
Confidence 99999999999999976321 178999999999999999999997 9999999999999999999999999998655
Q ss_pred cccc--ccccccccccccCcccc-ccCCCCcccceeehhHHHHHHHhCCCCCCC
Q 003926 637 ENAE--KVGHVIPYSGSIDPTNS-ARGKLEEKIDIYDFGLILLEIIVGRPLKSR 687 (786)
Q Consensus 637 ~~~~--~~~~~~~~~~~~aPe~~-~~~~~t~ksDVwSfGvvl~ElltG~~p~~~ 687 (786)
.... ......+...|++||.. ....++.++|||+||++++||++|+.||..
T Consensus 149 ~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 149 HRDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred cCcccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 4322 12233455678999987 556688899999999999999999999965
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.2e-26 Score=234.56 Aligned_cols=136 Identities=21% Similarity=0.366 Sum_probs=114.6
Q ss_pred cCCCccCccCCCCCceeEEEE-ecCCcEEEEEEecccCCCChHHHHHHHHHHhcCC-----C---CCcceeeeeeeeccc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLR-----H---RHLVSALGHCFECYF 547 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-----H---~NIv~l~g~~~~~~~ 547 (786)
..|-..++||.|-|++||.|. ..+.+.||+|+.+... ...+.-+.||++|++++ | .+||+|++++..
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkh--- 153 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKH--- 153 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeecccee---
Confidence 567788999999999999998 5568899999987543 45677889999999984 2 379999998865
Q ss_pred cCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeec
Q 003926 548 DDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD 620 (786)
Q Consensus 548 ~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld 620 (786)
.++++.++|+|+||+. -+|-.+|.... .+.++.....+|+.||+.||.|||+.| +|||-||||+|||+.
T Consensus 154 sGpNG~HVCMVfEvLG-dnLLklI~~s~-YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 154 SGPNGQHVCMVFEVLG-DNLLKLIKYSN-YRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLC 222 (590)
T ss_pred cCCCCcEEEEEehhhh-hHHHHHHHHhC-CCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeee
Confidence 3566789999999995 48888887542 356888999999999999999999987 999999999999984
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.1e-27 Score=231.97 Aligned_cols=267 Identities=19% Similarity=0.220 Sum_probs=187.8
Q ss_pred CCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 479 FDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
|.....+|.|.- .|--|.. -.++.||+|++..... ...+...+|..++..++|+||++++.++.- ........+.
T Consensus 19 y~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP-~~~l~~~~e~ 96 (369)
T KOG0665|consen 19 YVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTP-QKTLEEFQEV 96 (369)
T ss_pred eeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCc-cccHHHHHhH
Confidence 334466777776 4444432 2478999998765422 234567789999999999999999987642 1111123468
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
|+|||||.. +|...++. .++-.+...|..|+..|+.|||+. +|+||||||+||++..+...||.|||+++.
T Consensus 97 y~v~e~m~~-nl~~vi~~-----elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~ar~ 167 (369)
T KOG0665|consen 97 YLVMELMDA-NLCQVILM-----ELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGLART 167 (369)
T ss_pred HHHHHhhhh-HHHHHHHH-----hcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchhhcc
Confidence 999999974 99988873 367778888999999999999998 999999999999999999999999999976
Q ss_pred cccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchh-HHHHHHHHHHHHhccccc------
Q 003926 636 AENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVVTADESAR------ 708 (786)
Q Consensus 636 ~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~------ 708 (786)
............+..|.|||++.+-.|.+++||||.||++.||++|+-.|.+.+. +...+.++......+...
T Consensus 168 e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~ 247 (369)
T KOG0665|consen 168 EDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPT 247 (369)
T ss_pred cCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHH
Confidence 5444344455667889999998877799999999999999999999977764321 111111111111110000
Q ss_pred -----------------cccccccccc--cCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 709 -----------------RSMVDPAVNK--ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 709 -----------------~~~~d~~~~~--~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
+...|.-... +........+.+++.++|..+|++|-+.+++++|+++.
T Consensus 248 ~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 248 VRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred HHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence 0001110000 00111223456788899999999999999999999865
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.6e-26 Score=271.95 Aligned_cols=206 Identities=17% Similarity=0.244 Sum_probs=147.5
Q ss_pred cCCC-CCcceeeeeeeeccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCc
Q 003926 529 KLRH-RHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGV 607 (786)
Q Consensus 529 ~l~H-~NIv~l~g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~i 607 (786)
.++| +||+++++++..+..+....+.++.++||+ .++|+++|... ...+++.+++.++.||++||+|||+. +|
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---gI 101 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP--DRSVDAFECFHVFRQIVEIVNAAHSQ---GI 101 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc--cccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 3456 688889988744332222234577889988 45999999753 24589999999999999999999997 99
Q ss_pred cccCCCCCceeec-------------------CCCcccccCCCccccccccc-----------------ccccccccccc
Q 003926 608 FSNNLKITDILLD-------------------QNLVAKISSYNLPLLAENAE-----------------KVGHVIPYSGS 651 (786)
Q Consensus 608 vHrdlk~~NILld-------------------~~~~~kl~DfGl~~~~~~~~-----------------~~~~~~~~~~~ 651 (786)
+||||||+|||++ .++.+|++|||+++...... ......++..|
T Consensus 102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 181 (793)
T PLN00181 102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY 181 (793)
T ss_pred eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence 9999999999994 45667888888875421100 00112356779
Q ss_pred cCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHH
Q 003926 652 IDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEV 731 (786)
Q Consensus 652 ~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l 731 (786)
+|||.+....|+.++|||||||+||||++|.+|+..... .... +... ..++... .......++
T Consensus 182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~-~~~~-~~~~----------~~~~~~~-----~~~~~~~~~ 244 (793)
T PLN00181 182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR-TMSS-LRHR----------VLPPQIL-----LNWPKEASF 244 (793)
T ss_pred EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH-HHHH-HHHh----------hcChhhh-----hcCHHHHHH
Confidence 999999888999999999999999999999888643211 1111 1000 0111111 111234567
Q ss_pred HHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 732 CVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 732 ~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
+.+||+++|.+||+|.||++|+|+..
T Consensus 245 ~~~~L~~~P~~Rps~~eil~h~~~~~ 270 (793)
T PLN00181 245 CLWLLHPEPSCRPSMSELLQSEFINE 270 (793)
T ss_pred HHHhCCCChhhCcChHHHhhchhhhh
Confidence 78999999999999999999999765
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-26 Score=244.86 Aligned_cols=248 Identities=25% Similarity=0.234 Sum_probs=119.7
Q ss_pred CCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEcc
Q 003926 108 DLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLR 187 (786)
Q Consensus 108 ~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 187 (786)
++++|+|++|.++..-.+.|.+|.+|..|.|+.|+++...+..|.+|++|+.|+|..|++.-.---.|.+|++|+.|.|.
T Consensus 174 ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklq 253 (873)
T KOG4194|consen 174 NIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQ 253 (873)
T ss_pred CceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhh
Confidence 34444444444444444444444444444444444444444444444444444444444431112334444444444444
Q ss_pred CCcCcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCCCcCCEEEcccCCCCCCCCcc---ccchhhhhccCCccCCcC
Q 003926 188 NNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKV---GKKLVTMILSKNKFRSAI 263 (786)
Q Consensus 188 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~p~~---~~~L~~L~ls~N~l~~~~ 263 (786)
.|.++..--..|..|.+++.|+|+.|+++..-.. +.+|++|+.|+||+|.|...-++. ..+|++|+|+.|+|+...
T Consensus 254 rN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~ 333 (873)
T KOG4194|consen 254 RNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLD 333 (873)
T ss_pred hcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCC
Confidence 4444433333444455555555555554432221 445555555555555554333322 245555555555555555
Q ss_pred hhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCc---cCCCCCCCCEEeCcCCcCCccCChhhh
Q 003926 264 PAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFD---DLSCNPELGFVDLSSNLLTGQLPNCLL 340 (786)
Q Consensus 264 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~---~~~~~~~L~~l~ls~N~l~g~~p~~~~ 340 (786)
+..|..+..|++|+|++|+++..--..|..+++|+.|||++|.+++.+.+ .|..++.|+.|+|.+|++...--..+.
T Consensus 334 ~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfs 413 (873)
T KOG4194|consen 334 EGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFS 413 (873)
T ss_pred hhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhc
Confidence 55555555555555555555544444555555555555555555554433 234455555555555555522222333
Q ss_pred cCCCCcEEEcCCccc
Q 003926 341 AGSKNRVVLYARNCL 355 (786)
Q Consensus 341 ~~~~~~~~~~~~N~l 355 (786)
....+..+++.+|.+
T Consensus 414 gl~~LE~LdL~~Nai 428 (873)
T KOG4194|consen 414 GLEALEHLDLGDNAI 428 (873)
T ss_pred cCcccceecCCCCcc
Confidence 444455555555544
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.1e-25 Score=213.69 Aligned_cols=255 Identities=16% Similarity=0.272 Sum_probs=177.7
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCCCCce
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
+.|.+.+.+|+|.||.+-.++++ +.+.+++|.+.... ...++|.+|..---.+ .|.|||.-++...+ +.+.
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFq------t~d~ 96 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQ------TSDA 96 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhh------cCce
Confidence 45788899999999999999976 57889999886553 3467899998654445 59999988776543 2457
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceee-cCC-CcccccCCCc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL-DQN-LVAKISSYNL 632 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILl-d~~-~~~kl~DfGl 632 (786)
+..++||+|.|||.+-+... .+......+++.|++.|+.|||+. .+||||||.+|||+ +.+ ..+|++|||+
T Consensus 97 YvF~qE~aP~gdL~snv~~~----GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~ 169 (378)
T KOG1345|consen 97 YVFVQEFAPRGDLRSNVEAA----GIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGL 169 (378)
T ss_pred EEEeeccCccchhhhhcCcc----cccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeeccc
Confidence 88999999999999887542 467788889999999999999998 99999999999997 333 4799999999
Q ss_pred ccccccccccccccccccccCcccccc---C--CCCcccceeehhHHHHHHHhCCCCCCCchhH--HHHHHHHHHHHhcc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSAR---G--KLEEKIDIYDFGLILLEIIVGRPLKSRKEVD--LLKNQLQAVVTADE 705 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~---~--~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~--~~~~~~~~~~~~~~ 705 (786)
.+-.... ......+..|-+||.... + .....+|||.|||+++.++||++||+..... ...+|.++....
T Consensus 170 t~k~g~t--V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk-- 245 (378)
T KOG1345|consen 170 TRKVGTT--VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRK-- 245 (378)
T ss_pred ccccCce--ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhccc--
Confidence 7533211 111122345667775432 2 2567899999999999999999999853322 122232221111
Q ss_pred ccccccccccccccCcHHHHHHHHHHHHHhccCCCCCC---CCHHHHHHHHHHHH
Q 003926 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAER---PSVEDVLWNLQFAA 757 (786)
Q Consensus 706 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~R---Pt~~evl~~l~~~~ 757 (786)
.++++.. .......++++..+-+..+|++| -+.++....+|...
T Consensus 246 -------~~~~P~~-F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~E~ 292 (378)
T KOG1345|consen 246 -------NPALPKK-FNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWKEK 292 (378)
T ss_pred -------CccCchh-hcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHHHh
Confidence 1111111 01112345556667889999999 45555555566444
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.7e-25 Score=233.34 Aligned_cols=268 Identities=17% Similarity=0.238 Sum_probs=196.0
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCC------CCCcceeeeeeeecccc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLR------HRHLVSALGHCFECYFD 548 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~------H~NIv~l~g~~~~~~~~ 548 (786)
-..|......|+|-|++|.+|.. ..|+.||||+|..... ..+.=++|+++|++|+ --|+++|+-.+..
T Consensus 431 D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~-M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~h---- 505 (752)
T KOG0670|consen 431 DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV-MHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKH---- 505 (752)
T ss_pred cceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH-HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhh----
Confidence 34577777889999999999984 4588999999986532 2344478999999995 3488888876654
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC-cccc
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL-VAKI 627 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~-~~kl 627 (786)
.+++|||+|-+.- +|+++|.+-+....|.......++.|+.-||..|-.. +|+|.||||.|||+++.- ..||
T Consensus 506 ---knHLClVFE~Lsl-NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~iLKL 578 (752)
T KOG0670|consen 506 ---KNHLCLVFEPLSL-NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKNILKL 578 (752)
T ss_pred ---cceeEEEehhhhc-hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCcceeee
Confidence 5789999998864 9999998755555678888889999999999999987 999999999999999764 5799
Q ss_pred cCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCch-hHHHHHHHHHHHHhc--
Q 003926 628 SSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVVTAD-- 704 (786)
Q Consensus 628 ~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~-~~~~~~~~~~~~~~~-- 704 (786)
||||-|......+- +.......|.|||++.+-.|+...|+||.||.||||.||+-.|.+.. -+.+...+.......
T Consensus 579 CDfGSA~~~~enei-tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~K 657 (752)
T KOG0670|consen 579 CDFGSASFASENEI-TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNK 657 (752)
T ss_pred ccCccccccccccc-cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHH
Confidence 99999866644332 22223457899999999999999999999999999999998776532 222221111100000
Q ss_pred ----------------------cccc--------ccccccc------ccc--cCc---HHHHHHHHHHHHHhccCCCCCC
Q 003926 705 ----------------------ESAR--------RSMVDPA------VNK--ACL---DESLKTMMEVCVRCLLKNPAER 743 (786)
Q Consensus 705 ----------------------~~~~--------~~~~d~~------~~~--~~~---~~~~~~~~~l~~~Cl~~dP~~R 743 (786)
...+ ...+.|. +.. ..+ ...+..+.+|...|+..||++|
T Consensus 658 mlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KR 737 (752)
T KOG0670|consen 658 MLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKR 737 (752)
T ss_pred HhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhc
Confidence 0000 0001110 000 011 2345677888889999999999
Q ss_pred CCHHHHHHHHHHH
Q 003926 744 PSVEDVLWNLQFA 756 (786)
Q Consensus 744 Pt~~evl~~l~~~ 756 (786)
-|..|.|.|+++.
T Consensus 738 it~nqAL~HpFi~ 750 (752)
T KOG0670|consen 738 ITVNQALKHPFIT 750 (752)
T ss_pred CCHHHHhcCCccc
Confidence 9999999999864
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.8e-25 Score=236.34 Aligned_cols=255 Identities=21% Similarity=0.194 Sum_probs=149.7
Q ss_pred cCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCC
Q 003926 103 LVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILA 182 (786)
Q Consensus 103 l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 182 (786)
+-++++|+.++|..|.++. ||....-..+|+.|+|.+|.|+..-.+++..++.|++||||.|.++..--..|..-.+++
T Consensus 98 f~nl~nLq~v~l~~N~Lt~-IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~ 176 (873)
T KOG4194|consen 98 FYNLPNLQEVNLNKNELTR-IPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIK 176 (873)
T ss_pred HhcCCcceeeeeccchhhh-cccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCce
Confidence 4455555555555555533 233233333355555555555544444455555555555555555433223444444455
Q ss_pred EEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCC-CCCCCCcCCEEEcccCC------------------------
Q 003926 183 VLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVP-DFSGLTYLQVLDLENNA------------------------ 237 (786)
Q Consensus 183 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~L~~N~------------------------ 237 (786)
+|+|++|.|+..--..|.++.+|..|.|++|+++..++ .|.+|++|+.|+|..|+
T Consensus 177 ~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~ 256 (873)
T KOG4194|consen 177 KLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRND 256 (873)
T ss_pred EEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcC
Confidence 55555555544444445555555555555555543332 24445555555555544
Q ss_pred CCCCCCc---cccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCcc
Q 003926 238 LGPQFPK---VGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDD 314 (786)
Q Consensus 238 l~~~~p~---~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~ 314 (786)
+...-.. .+.++++|+|+.|+++..-..++-+++.|+.||||+|.|..+-++.+...++|+.|+|++|+|+...+..
T Consensus 257 I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~s 336 (873)
T KOG4194|consen 257 ISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGS 336 (873)
T ss_pred cccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhH
Confidence 4322111 2356677777777777666667777777777777777777777777777777777777777777777777
Q ss_pred CCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCCC
Q 003926 315 LSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAAG 358 (786)
Q Consensus 315 ~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~~ 358 (786)
|..+..|+.|+|++|.+...-...+..++++..+++.+|.+++.
T Consensus 337 f~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~ 380 (873)
T KOG4194|consen 337 FRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWC 380 (873)
T ss_pred HHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEE
Confidence 77777777777777777755555555667778888888877653
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.7e-24 Score=222.93 Aligned_cols=269 Identities=16% Similarity=0.266 Sum_probs=192.8
Q ss_pred HHHHhcCCCccCccCCCCCceeEEEEe-c---CCcEEEEEEecccCCCChHHHHHHHHHHhcCC-CCCcceeeeeeeecc
Q 003926 472 LEEATNNFDTSAFMGEGSQGQMYRGRL-K---NGTFVAIRCLKMKKCHSTRNFMHHIELISKLR-HRHLVSALGHCFECY 546 (786)
Q Consensus 472 l~~~~~~f~~~~~iG~G~fg~Vy~~~~-~---~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~NIv~l~g~~~~~~ 546 (786)
+....+.|...++||+|.|++||+|.. . ..+.||+|.+..... .....+|++.|..+. |.||+++.++...
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~--p~ri~~El~~L~~~gG~~ni~~~~~~~rn-- 106 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS--PSRILNELEMLYRLGGSDNIIKLNGCFRN-- 106 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC--chHHHHHHHHHHHhccchhhhcchhhhcc--
Confidence 344456788899999999999999984 3 467999999876543 455889999999994 9999999987653
Q ss_pred ccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCC-Ccc
Q 003926 547 FDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN-LVA 625 (786)
Q Consensus 547 ~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~-~~~ 625 (786)
++...+|+||++.-+-.+++.. ++......+.....+||.|+|.+ +|||||+||+|+|.+.. ..-
T Consensus 107 -----nd~v~ivlp~~~H~~f~~l~~~------l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg 172 (418)
T KOG1167|consen 107 -----NDQVAIVLPYFEHDRFRDLYRS------LSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRG 172 (418)
T ss_pred -----CCeeEEEecccCccCHHHHHhc------CCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCc
Confidence 5778999999999998888864 67788888999999999999998 99999999999999854 456
Q ss_pred cccCCCccccccccc---------------------------------------------ccccccccccccCccccc-c
Q 003926 626 KISSYNLPLLAENAE---------------------------------------------KVGHVIPYSGSIDPTNSA-R 659 (786)
Q Consensus 626 kl~DfGl~~~~~~~~---------------------------------------------~~~~~~~~~~~~aPe~~~-~ 659 (786)
.|.|||++...+... ......||++|.|||++. .
T Consensus 173 ~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~ 252 (418)
T KOG1167|consen 173 VLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRC 252 (418)
T ss_pred eEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhc
Confidence 799999985111000 001234678889999864 3
Q ss_pred CCCCcccceeehhHHHHHHHhCCCCCCCc--hhHHHHHHHHH---------HHHhccccccc---------------ccc
Q 003926 660 GKLEEKIDIYDFGLILLEIIVGRPLKSRK--EVDLLKNQLQA---------VVTADESARRS---------------MVD 713 (786)
Q Consensus 660 ~~~t~ksDVwSfGvvl~ElltG~~p~~~~--~~~~~~~~~~~---------~~~~~~~~~~~---------------~~d 713 (786)
..-++++||||-|||++-+++++.||-.. +.+.+.+++.. +.........+ -++
T Consensus 253 ~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~ 332 (418)
T KOG1167|consen 253 PRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLH 332 (418)
T ss_pred cCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccC
Confidence 55788999999999999999999887432 22222222111 00011000000 000
Q ss_pred -ccccc---------cCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 714 -PAVNK---------ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 714 -~~~~~---------~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
+.... ...+.....++++..+|+..||.+|-|++|.++|++|-..
T Consensus 333 ~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~ 387 (418)
T KOG1167|consen 333 IESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEA 387 (418)
T ss_pred hhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcch
Confidence 00000 0011112356788889999999999999999999997754
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.9e-25 Score=231.80 Aligned_cols=196 Identities=17% Similarity=0.238 Sum_probs=164.0
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC--------ChHHHHHHHHHHhcCC---CCCcceeeeeeee
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--------STRNFMHHIELISKLR---HRHLVSALGHCFE 544 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--------~~~~f~~E~~~l~~l~---H~NIv~l~g~~~~ 544 (786)
.+|...+.+|+|+||.|+.|.++ +...|+||.+.+++.- .....-.|+++|..++ |+||+++++++.+
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 46788899999999999999976 4668999998765421 1123457999999998 9999999999875
Q ss_pred ccccCCCCceEEEEEecC-CCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC
Q 003926 545 CYFDDSSVSRIFLIFEYV-PNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL 623 (786)
Q Consensus 545 ~~~~~~~~~~~~LV~Ey~-~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~ 623 (786)
.+.+||+||-- ++-||.++|.- +..++......|..||+.|+++||+. +|||||||=+||.+|.+|
T Consensus 641 -------dd~yyl~te~hg~gIDLFd~IE~---kp~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g 707 (772)
T KOG1152|consen 641 -------DDYYYLETEVHGEGIDLFDFIEF---KPRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNG 707 (772)
T ss_pred -------CCeeEEEecCCCCCcchhhhhhc---cCccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCC
Confidence 46789999975 56699999974 35689999999999999999999998 999999999999999999
Q ss_pred cccccCCCcccccccccccccccccccccCccccccCCC-CcccceeehhHHHHHHHhCCCCCC
Q 003926 624 VAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKS 686 (786)
Q Consensus 624 ~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~-t~ksDVwSfGvvl~ElltG~~p~~ 686 (786)
-+|+.|||-+..... .......||..|.|||.+.+.+| +..-|||++||+||.++....|+.
T Consensus 708 ~~klidfgsaa~~ks-gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 708 FVKLIDFGSAAYTKS-GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred eEEEeeccchhhhcC-CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 999999998755433 23455678899999999988876 456899999999999998887764
|
|
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-26 Score=245.20 Aligned_cols=276 Identities=28% Similarity=0.330 Sum_probs=210.6
Q ss_pred CEEEEEeCCCCCCC-CCCCCC--------------cCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEecc
Q 003926 75 SITQLHIVGNKRAP-MLPLSF--------------SMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMS 139 (786)
Q Consensus 75 ~v~~l~l~~~~~~~-~l~~~~--------------~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls 139 (786)
-|..+|+++|.++| ..|.+. ..-.+|..++.|.+|++|.+++|++... -+.++.|+.|+.+.+.
T Consensus 8 FVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~~vPeEL~~lqkLEHLs~~HN~L~~v-hGELs~Lp~LRsv~~R 86 (1255)
T KOG0444|consen 8 FVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLEQVPEELSRLQKLEHLSMAHNQLISV-HGELSDLPRLRSVIVR 86 (1255)
T ss_pred eeecccccCCcCCCCcCchhHHHhhheeEEEechhhhhhChHHHHHHhhhhhhhhhhhhhHhh-hhhhccchhhHHHhhh
Confidence 47788888888774 455421 1124677888899999999999988653 4678888999999999
Q ss_pred CCCCC-CCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcC
Q 003926 140 SNFLN-GAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGE 218 (786)
Q Consensus 140 ~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 218 (786)
.|++. .-+|..+..+..|..||||+|++. ..|..+..-.++.+|+||+|+|..+....|-+|+.|-.||||+|++...
T Consensus 87 ~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe~L 165 (1255)
T KOG0444|consen 87 DNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLEML 165 (1255)
T ss_pred ccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhhhc
Confidence 99884 457888889999999999999997 7888888889999999999999854444578999999999999999988
Q ss_pred CCCCCCCCcCCEEEcccCCCCC----CCCccccchhhhhccCCccC-CcChhhhcCccccceeeccCccccCCCchhhCC
Q 003926 219 VPDFSGLTYLQVLDLENNALGP----QFPKVGKKLVTMILSKNKFR-SAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLS 293 (786)
Q Consensus 219 ~p~~~~l~~L~~L~L~~N~l~~----~~p~~~~~L~~L~ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 293 (786)
+|....|.+|+.|+|++|.+.. ++| .+++|..|.+++.+=+ ..+|.++..+.+|..+|||.|++. .+|+.+.+
T Consensus 166 PPQ~RRL~~LqtL~Ls~NPL~hfQLrQLP-smtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~ 243 (1255)
T KOG0444|consen 166 PPQIRRLSMLQTLKLSNNPLNHFQLRQLP-SMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYK 243 (1255)
T ss_pred CHHHHHHhhhhhhhcCCChhhHHHHhcCc-cchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhh
Confidence 8889999999999999997742 222 2356777777765432 356777778888888888888887 67888888
Q ss_pred CCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccC
Q 003926 294 LPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLA 356 (786)
Q Consensus 294 l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~ 356 (786)
+++|+.|+||+|+|+.. ....+...+|++|+||.|+++ .+|+++..+++++.+...+|.++
T Consensus 244 l~~LrrLNLS~N~iteL-~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~ 304 (1255)
T KOG0444|consen 244 LRNLRRLNLSGNKITEL-NMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLT 304 (1255)
T ss_pred hhhhheeccCcCceeee-eccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCccc
Confidence 88888888888887732 222334456777778888877 67777777777777777777654
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.3e-24 Score=206.88 Aligned_cols=166 Identities=17% Similarity=0.197 Sum_probs=124.9
Q ss_pred CChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccccccccccc
Q 003926 565 GTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGH 644 (786)
Q Consensus 565 GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~~~~~ 644 (786)
|+|.++++.. ...++|.++..++.|+++||+|||+. + ||+||+++.++.+|+ ||++.......
T Consensus 1 GsL~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~---- 63 (176)
T smart00750 1 VSLADILEVR--GRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQ---- 63 (176)
T ss_pred CcHHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecccc----
Confidence 7999999753 23699999999999999999999986 3 999999999999999 99987654322
Q ss_pred ccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchh--HHHHHHHHHHHHhccccccccccccccccCcH
Q 003926 645 VIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEV--DLLKNQLQAVVTADESARRSMVDPAVNKACLD 722 (786)
Q Consensus 645 ~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 722 (786)
..++..|+|||.+....|+.|+|||||||++|||+||++|+..... .......... ... ++.. .....
T Consensus 64 ~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~-~~~--------~~~~-~~~~~ 133 (176)
T smart00750 64 SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGM-PAD--------DPRD-RSNLE 133 (176)
T ss_pred CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHh-ccC--------Cccc-cccHH
Confidence 2456889999999999999999999999999999999999865322 1111111110 000 0000 00111
Q ss_pred HHH--HHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 723 ESL--KTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 723 ~~~--~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
... ..+.+++.+||+.+|++||++.|+++|++...
T Consensus 134 ~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 134 SVSAARSFADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred HHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 122 25788999999999999999999999998764
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.6e-23 Score=241.15 Aligned_cols=307 Identities=22% Similarity=0.317 Sum_probs=209.6
Q ss_pred cccCCHHHHHHHHHHHhcCCCCCCCCC----CCCCCCCCCCCC-----------CCCccEEeCCCCEEEEEeCCCCCCCC
Q 003926 25 SEQLQSSQAQTLLRIQGLLNNPAVLSS----WNITTEFCNTEP-----------TSSLTVVCYEESITQLHIVGNKRAPM 89 (786)
Q Consensus 25 ~~~~~~~~~~~ll~~k~~~~~~~~l~~----W~~~~~~C~w~~-----------~~~~~v~c~~~~v~~l~l~~~~~~~~ 89 (786)
++...++|.+.+++..+.|..|+.+++ |+.++++|.-.+ .+...|.|.++.||.+...+......
T Consensus 57 ~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~fc~~~~~~~~~l~~~~~~~~~tv~~~~~~vt~l~~~g~~~~~~ 136 (754)
T PRK15370 57 PETASPEEIKSKFECLRMLAFPAYADNIQYSRGGADQYCILSENSQEILSIVFNTEGYTVEGGGKSVTYTRVTESEQASS 136 (754)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCchhhccccccCCCCcccccCCcchhhheeeecCCceEEecCCCccccccccccccccc
Confidence 334567899999999999999987666 998899998776 56778999999999999888543321
Q ss_pred CCCCCc------------CCcccc-------c---c--CCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCC
Q 003926 90 LPLSFS------------MDSFVT-------T---L--VKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNG 145 (786)
Q Consensus 90 l~~~~~------------~~~~~~-------~---l--~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~ 145 (786)
...+-. ...-+. . + +-..+...|+|++++++. +|..+. ++|+.|+|++|+|+.
T Consensus 137 ~~~~~~~~~~~~~w~~w~~~~~~~~~~~r~~a~~r~~~Cl~~~~~~L~L~~~~Lts-LP~~Ip--~~L~~L~Ls~N~Lts 213 (754)
T PRK15370 137 ASGSKDAVNYELIWSEWVKEAPAKEAANREEAVQRMRDCLKNNKTELRLKILGLTT-IPACIP--EQITTLILDNNELKS 213 (754)
T ss_pred CCCCCChhhHHHHHHHHHhcCCCCccccHHHHHHHHHhhcccCceEEEeCCCCcCc-CCcccc--cCCcEEEecCCCCCc
Confidence 111000 000000 0 0 112456788888888775 454443 478888888888884
Q ss_pred CCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCC
Q 003926 146 AIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGL 225 (786)
Q Consensus 146 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l 225 (786)
+|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|.+. .+|..+. ++|+.|+|++|+++..+..+.
T Consensus 214 -LP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~~LP~~l~-- 282 (754)
T PRK15370 214 -LPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKISCLPENLP-- 282 (754)
T ss_pred -CChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccCccccccC--
Confidence 555443 57888888888887 4565543 46888888888887 5666553 478888888888875332343
Q ss_pred CcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecC
Q 003926 226 TYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADN 305 (786)
Q Consensus 226 ~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 305 (786)
.+|+.|+|++|+|+...+....+|+.|++++|+++. +|..+. ++|+.|++++|.|++ +|..+. ++|+.|++++|
T Consensus 283 ~sL~~L~Ls~N~Lt~LP~~lp~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N 356 (754)
T PRK15370 283 EELRYLSVYDNSIRTLPAHLPSGITHLNVQSNSLTA-LPETLP--PGLKTLEAGENALTS-LPASLP--PELQVLDVSKN 356 (754)
T ss_pred CCCcEEECCCCccccCcccchhhHHHHHhcCCcccc-CCcccc--ccceeccccCCcccc-CChhhc--CcccEEECCCC
Confidence 478888888888876443344678888888888875 454332 578888888888875 566553 67888888888
Q ss_pred CCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 306 KLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 306 ~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
+|+. +|..+ .+.|+.|+|++|+|+ .+|..+.. .+..+++++|.+..
T Consensus 357 ~L~~-LP~~l--p~~L~~LdLs~N~Lt-~LP~~l~~--sL~~LdLs~N~L~~ 402 (754)
T PRK15370 357 QITV-LPETL--PPTITTLDVSRNALT-NLPENLPA--ALQIMQASRNNLVR 402 (754)
T ss_pred CCCc-CChhh--cCCcCEEECCCCcCC-CCCHhHHH--HHHHHhhccCCccc
Confidence 8873 55544 257888888888887 45665432 46667777777764
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.1e-24 Score=206.40 Aligned_cols=243 Identities=19% Similarity=0.351 Sum_probs=179.9
Q ss_pred cCccCCCCCceeEEEEecCCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEEEE
Q 003926 482 SAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIF 559 (786)
Q Consensus 482 ~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV~ 559 (786)
..+|.+...|+.|+|++.. .-+++|+++.... ...++|..|.-.++-+.||||++++|.|.. ...+.++.
T Consensus 195 ~tkl~e~hsgelwrgrwqg-ndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacns-------ppnlv~is 266 (448)
T KOG0195|consen 195 ITKLAESHSGELWRGRWQG-NDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNS-------PPNLVIIS 266 (448)
T ss_pred hhhhccCCCcccccccccC-cchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccC-------CCCceEee
Confidence 4567888999999999984 4566688776554 335789999999999999999999999965 45688999
Q ss_pred ecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCccccc--CCCcccccc
Q 003926 560 EYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKIS--SYNLPLLAE 637 (786)
Q Consensus 560 Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~--DfGl~~~~~ 637 (786)
.|||.|||+..|++.. ...++-.+.+++|.++|+||+|||+- .|-|..--+.+..+++|++.++||+ |--++.
T Consensus 267 q~mp~gslynvlhe~t-~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~kfsf--- 341 (448)
T KOG0195|consen 267 QYMPFGSLYNVLHEQT-SVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADTKFSF--- 341 (448)
T ss_pred eeccchHHHHHHhcCc-cEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccceeee---
Confidence 9999999999999753 23567788999999999999999984 3334444689999999999999885 211111
Q ss_pred cccccccccccccccCccccccCCCC---cccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccc
Q 003926 638 NAEKVGHVIPYSGSIDPTNSARGKLE---EKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDP 714 (786)
Q Consensus 638 ~~~~~~~~~~~~~~~aPe~~~~~~~t---~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 714 (786)
........+.||+||.+.+..-+ ..+|+|||.|++||+.|...||.+-...+....+ .-...+.-+.|
T Consensus 342 ---qe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmki------aleglrv~ipp 412 (448)
T KOG0195|consen 342 ---QEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKI------ALEGLRVHIPP 412 (448)
T ss_pred ---eccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhh------hhccccccCCC
Confidence 01122345679999988765433 4789999999999999999999764432221111 11112222233
Q ss_pred cccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 715 AVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 715 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
. ....+.+++.-|+..||.+||.+..|+-.|+
T Consensus 413 g--------is~hm~klm~icmnedpgkrpkfdmivpile 444 (448)
T KOG0195|consen 413 G--------ISRHMNKLMNICMNEDPGKRPKFDMIVPILE 444 (448)
T ss_pred C--------ccHHHHHHHHHHhcCCCCcCCCcceehhhHH
Confidence 2 2345677888899999999999999887665
|
|
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.9e-25 Score=237.07 Aligned_cols=250 Identities=28% Similarity=0.360 Sum_probs=188.6
Q ss_pred cccCCCCCCCEEEccCCCCc-cCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCC-cccCCC
Q 003926 101 TTLVKLPDLKVLRLVSLGLW-GPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVP-DWLGSL 178 (786)
Q Consensus 101 ~~l~~l~~L~~L~L~~n~l~-g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l 178 (786)
..+..||.|+.+.+..|++. .-+|..+..|..|++||||+|++. ..|..+..-+++-.|+||+|++. .|| ..|-+|
T Consensus 72 GELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinL 149 (1255)
T KOG0444|consen 72 GELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINL 149 (1255)
T ss_pred hhhccchhhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhh
Confidence 46778999999999999995 346888999999999999999998 78999999999999999999998 555 567899
Q ss_pred CCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCc----CCC----------------------CCCCCCcCCEEE
Q 003926 179 PILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYG----EVP----------------------DFSGLTYLQVLD 232 (786)
Q Consensus 179 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~----~~p----------------------~~~~l~~L~~L~ 232 (786)
+.|-+||||+|++. .+|+.+..|..|+.|+|++|.+.- .+| ++..+.+|..+|
T Consensus 150 tDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvD 228 (1255)
T KOG0444|consen 150 TDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVD 228 (1255)
T ss_pred HhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhcc
Confidence 99999999999998 678889999999999999998732 111 233445555566
Q ss_pred cccCCCCCCCCcc---ccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCC-
Q 003926 233 LENNALGPQFPKV---GKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLT- 308 (786)
Q Consensus 233 L~~N~l~~~~p~~---~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~- 308 (786)
||.|++. .+|.. ..+|+.|+||+|+|+. +....+.+.+|+.|+||.|+++ .+|+.+++++.|+.|.+.+|+++
T Consensus 229 lS~N~Lp-~vPecly~l~~LrrLNLS~N~ite-L~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~F 305 (1255)
T KOG0444|consen 229 LSENNLP-IVPECLYKLRNLRRLNLSGNKITE-LNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTF 305 (1255)
T ss_pred ccccCCC-cchHHHhhhhhhheeccCcCceee-eeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccc
Confidence 6666553 23322 2456666666666653 3334455566666777777766 56777777777777777777765
Q ss_pred cccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 309 GKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 309 g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
.-+|..++.+.+|+.+..++|.+. .+|..+..|.+++.+.+..|.+..
T Consensus 306 eGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLiT 353 (1255)
T KOG0444|consen 306 EGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLIT 353 (1255)
T ss_pred cCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhcccccceee
Confidence 246777777777777777777776 677777777778888888887654
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2e-22 Score=215.41 Aligned_cols=162 Identities=16% Similarity=0.157 Sum_probs=122.9
Q ss_pred HhcCCCccCccCCCCCceeEEEEec--CCcEEEEEEecccC-----CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccc
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLK--NGTFVAIRCLKMKK-----CHSTRNFMHHIELISKLRHRHLVSALGHCFECYF 547 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~--~g~~vAvK~l~~~~-----~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~ 547 (786)
..++|...+.||+|+||+||+|+.+ +++.||||++.... ....+.|.+|+++|++++|+|||+.+..+
T Consensus 16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~----- 90 (365)
T PRK09188 16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT----- 90 (365)
T ss_pred ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc-----
Confidence 3467889999999999999999864 57888999875331 11245699999999999999999633211
Q ss_pred cCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCC-CCCceeecCCCccc
Q 003926 548 DDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNL-KITDILLDQNLVAK 626 (786)
Q Consensus 548 ~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdl-k~~NILld~~~~~k 626 (786)
+..|+||||+++++|... .. . . ...++.++++||.|||+. +|+|||| ||+|||++.++.+|
T Consensus 91 -----~~~~LVmE~~~G~~L~~~-~~---~---~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ik 152 (365)
T PRK09188 91 -----GKDGLVRGWTEGVPLHLA-RP---H---G---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAA 152 (365)
T ss_pred -----CCcEEEEEccCCCCHHHh-Cc---c---c---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEE
Confidence 236999999999999732 11 0 1 135678999999999997 9999999 99999999999999
Q ss_pred ccCCCccccccccc---------ccccccccccccCcccccc
Q 003926 627 ISSYNLPLLAENAE---------KVGHVIPYSGSIDPTNSAR 659 (786)
Q Consensus 627 l~DfGl~~~~~~~~---------~~~~~~~~~~~~aPe~~~~ 659 (786)
|+|||+++...... ......++..|++||++..
T Consensus 153 LiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 153 VIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred EEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 99999986543221 1123345566889987654
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.7e-23 Score=211.13 Aligned_cols=249 Identities=31% Similarity=0.374 Sum_probs=191.8
Q ss_pred cccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCccc-CC
Q 003926 99 FVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWL-GS 177 (786)
Q Consensus 99 ~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~ 177 (786)
.|+...+++.|++||...|-+ +.+|+.++.|.+|+.|+|..|.|. .+| +|..|+.|..|+++.|++. .+|... ..
T Consensus 175 l~~~~i~m~~L~~ld~~~N~L-~tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~ 250 (565)
T KOG0472|consen 175 LPENHIAMKRLKHLDCNSNLL-ETLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKH 250 (565)
T ss_pred CCHHHHHHHHHHhcccchhhh-hcCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcc
Confidence 344455578888888877766 556778888888888888888887 556 7888888888888888886 566544 48
Q ss_pred CCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCC-----------------
Q 003926 178 LPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGP----------------- 240 (786)
Q Consensus 178 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~----------------- 240 (786)
+++|.+|||..|++. ..|+.+..+.+|.+||+|+|.+++.+++++++ .|+.|.+.+|.+..
T Consensus 251 L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyL 328 (565)
T KOG0472|consen 251 LNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYL 328 (565)
T ss_pred cccceeeeccccccc-cCchHHHHhhhhhhhcccCCccccCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHH
Confidence 888888888888887 68888888888888888888888888888888 88888888886520
Q ss_pred -------------------------CCCcc-----------------------c--------------------------
Q 003926 241 -------------------------QFPKV-----------------------G-------------------------- 246 (786)
Q Consensus 241 -------------------------~~p~~-----------------------~-------------------------- 246 (786)
.+|.. +
T Consensus 329 rs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~elPk~L~ 408 (565)
T KOG0472|consen 329 RSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLCELPKRLV 408 (565)
T ss_pred HHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHhhhhhhhH
Confidence 01100 0
Q ss_pred --cc-hhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCc--------------
Q 003926 247 --KK-LVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTG-------------- 309 (786)
Q Consensus 247 --~~-L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g-------------- 309 (786)
+. +..+.+++|.+ +-+|..++.+++|..|+|++|-+. .+|..++.+..|+.||++.|+|.-
T Consensus 409 ~lkelvT~l~lsnn~i-sfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr~lP~~~y~lq~lEtl 486 (565)
T KOG0472|consen 409 ELKELVTDLVLSNNKI-SFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFRMLPECLYELQTLETL 486 (565)
T ss_pred HHHHHHHHHHhhcCcc-ccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccccchHHHhhHHHHHHH
Confidence 00 12334444444 567888888999999999999887 689999999999999999998852
Q ss_pred --------ccC-ccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccC
Q 003926 310 --------KLF-DDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLA 356 (786)
Q Consensus 310 --------~~~-~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~ 356 (786)
.++ +.+.++.+|..|||.+|.+. +||..++++.+++.+.+.+|.+.
T Consensus 487 las~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 487 LASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred HhccccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 233 33778889999999999998 78999999999999999999875
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.4e-24 Score=216.24 Aligned_cols=260 Identities=29% Similarity=0.365 Sum_probs=227.1
Q ss_pred EEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCC
Q 003926 76 ITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILT 155 (786)
Q Consensus 76 v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 155 (786)
+..+.+++|.+.. +.+.+.+|..|.+|++++|++.. +|++++.+..++.|+.|+|+++ .+|+.++.+.
T Consensus 47 l~~lils~N~l~~----------l~~dl~nL~~l~vl~~~~n~l~~-lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~ 114 (565)
T KOG0472|consen 47 LQKLILSHNDLEV----------LREDLKNLACLTVLNVHDNKLSQ-LPAAIGELEALKSLNVSHNKLS-ELPEQIGSLI 114 (565)
T ss_pred hhhhhhccCchhh----------ccHhhhcccceeEEEeccchhhh-CCHHHHHHHHHHHhhcccchHh-hccHHHhhhh
Confidence 4556666665432 23467789999999999999976 4778999999999999999998 7899999999
Q ss_pred CCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEccc
Q 003926 156 SLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLEN 235 (786)
Q Consensus 156 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~ 235 (786)
+|..|+.++|.+. .+|+.++.+-.|+.|+..+|+++ ..|+.+.++.+|..|++.+|++...+|+.-+++.|+.||...
T Consensus 115 ~l~~l~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~m~~L~~ld~~~ 192 (565)
T KOG0472|consen 115 SLVKLDCSSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIAMKRLKHLDCNS 192 (565)
T ss_pred hhhhhhcccccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHHHHHHHhcccch
Confidence 9999999999998 78889999999999999999998 688889999999999999999999988877799999999999
Q ss_pred CCCCCCCCcc--ccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhC-CCCCCcEEEeecCCCCcccC
Q 003926 236 NALGPQFPKV--GKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALL-SLPSITYLNIADNKLTGKLF 312 (786)
Q Consensus 236 N~l~~~~p~~--~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~g~~~ 312 (786)
|-++..+|.. +.+|..|+|..|++.. +| +|..+..|.+|.++.|+|. .+|...+ ++++|..|||.+|+++ ..|
T Consensus 193 N~L~tlP~~lg~l~~L~~LyL~~Nki~~-lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~P 268 (565)
T KOG0472|consen 193 NLLETLPPELGGLESLELLYLRRNKIRF-LP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVP 268 (565)
T ss_pred hhhhcCChhhcchhhhHHHHhhhccccc-CC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCc
Confidence 9998777775 4789999999999964 66 8999999999999999998 6676665 9999999999999998 678
Q ss_pred ccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCccc
Q 003926 313 DDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCL 355 (786)
Q Consensus 313 ~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l 355 (786)
+.+.-+.+|+.||+|+|.+++ +|..++++ .++++.+.+|.+
T Consensus 269 de~clLrsL~rLDlSNN~is~-Lp~sLgnl-hL~~L~leGNPl 309 (565)
T KOG0472|consen 269 DEICLLRSLERLDLSNNDISS-LPYSLGNL-HLKFLALEGNPL 309 (565)
T ss_pred hHHHHhhhhhhhcccCCcccc-CCcccccc-eeeehhhcCCch
Confidence 899889999999999999994 77777777 677777777655
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.2e-20 Score=213.93 Aligned_cols=220 Identities=27% Similarity=0.293 Sum_probs=156.8
Q ss_pred CCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEE
Q 003926 106 LPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLS 185 (786)
Q Consensus 106 l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 185 (786)
+++|++|+|++|+|+.. |.. .++|+.|+|++|.++. +|.. .++|+.|+|++|+++ .+|. .+++|+.|+
T Consensus 241 p~~Lk~LdLs~N~LtsL-P~l---p~sL~~L~Ls~N~L~~-Lp~l---p~~L~~L~Ls~N~Lt-~LP~---~p~~L~~Ld 308 (788)
T PRK15387 241 PPELRTLEVSGNQLTSL-PVL---PPGLLELSIFSNPLTH-LPAL---PSGLCKLWIFGNQLT-SLPV---LPPGLQELS 308 (788)
T ss_pred CCCCcEEEecCCccCcc-cCc---ccccceeeccCCchhh-hhhc---hhhcCEEECcCCccc-cccc---cccccceeE
Confidence 35666677766666643 322 3466666666666653 3332 245667777777776 3443 236678888
Q ss_pred ccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChh
Q 003926 186 LRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPA 265 (786)
Q Consensus 186 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~ 265 (786)
|++|+|++ +|... .+|+.|++++|++++ +|.+ ..+|++|+|++|+|+. +|....+|..|++++|+|++ +|.
T Consensus 309 LS~N~L~~-Lp~lp---~~L~~L~Ls~N~L~~-LP~l--p~~Lq~LdLS~N~Ls~-LP~lp~~L~~L~Ls~N~L~~-LP~ 379 (788)
T PRK15387 309 VSDNQLAS-LPALP---SELCKLWAYNNQLTS-LPTL--PSGLQELSVSDNQLAS-LPTLPSELYKLWAYNNRLTS-LPA 379 (788)
T ss_pred CCCCcccc-CCCCc---ccccccccccCcccc-cccc--ccccceEecCCCccCC-CCCCCcccceehhhcccccc-Ccc
Confidence 88887775 44422 356677788887765 4432 2578999999999885 55566788889999999875 665
Q ss_pred hhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCC
Q 003926 266 EVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKN 345 (786)
Q Consensus 266 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~ 345 (786)
. ..+|+.|+|++|+|++ +|.. .++|+.|++++|+|++ +|.. ..+|+.|++++|+|+ .+|..+..+..+
T Consensus 380 l---~~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L 447 (788)
T PRK15387 380 L---PSGLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSE 447 (788)
T ss_pred c---ccccceEEecCCcccC-CCCc---ccCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCC
Confidence 3 3568999999999985 5543 3679999999999986 5643 346888999999998 789999989999
Q ss_pred cEEEcCCcccCCC
Q 003926 346 RVVLYARNCLAAG 358 (786)
Q Consensus 346 ~~~~~~~N~l~~~ 358 (786)
..+++++|.+++.
T Consensus 448 ~~LdLs~N~Ls~~ 460 (788)
T PRK15387 448 TTVNLEGNPLSER 460 (788)
T ss_pred CeEECCCCCCCch
Confidence 9999999999873
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.5e-19 Score=194.27 Aligned_cols=255 Identities=20% Similarity=0.343 Sum_probs=190.6
Q ss_pred CCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCC---hHHHHHHHHHHhcCCCC-CcceeeeeeeeccccCCCCce
Q 003926 479 FDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHS---TRNFMHHIELISKLRHR-HLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~---~~~f~~E~~~l~~l~H~-NIv~l~g~~~~~~~~~~~~~~ 554 (786)
|...+.||.|+||.||++... ..+|+|.+....... ...|.+|+.+++.+.|+ +|+++.+++.. ...
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~-------~~~ 72 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQD-------EGS 72 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEec-------CCE
Confidence 455678999999999999976 789999998665432 57799999999999988 79999988743 233
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC-cccccCCCcc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL-VAKISSYNLP 633 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~-~~kl~DfGl~ 633 (786)
.++++||+.++++.+++........+.......+..+++.++.|+|+. +++|||+||+||+++... .+++.|||.+
T Consensus 73 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~ 149 (384)
T COG0515 73 LYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLA 149 (384)
T ss_pred EEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcc
Confidence 799999999999997776532112578888999999999999999998 899999999999999988 7999999998
Q ss_pred ccccccc-------ccccccccccccCcccccc---CCCCcccceeehhHHHHHHHhCCCCCCCchh----HHHHHHHHH
Q 003926 634 LLAENAE-------KVGHVIPYSGSIDPTNSAR---GKLEEKIDIYDFGLILLEIIVGRPLKSRKEV----DLLKNQLQA 699 (786)
Q Consensus 634 ~~~~~~~-------~~~~~~~~~~~~aPe~~~~---~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~----~~~~~~~~~ 699 (786)
....... ......++..|++||.... ..++...|+||+|++++++++|..|+..... ......+..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 229 (384)
T COG0515 150 KLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILE 229 (384)
T ss_pred eecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHh
Confidence 6443222 2244567788999998876 5788999999999999999999999765432 122111111
Q ss_pred HHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 003926 700 VVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWN 752 (786)
Q Consensus 700 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 752 (786)
... . .................+.+++.+|+..+|..|.++.+...+
T Consensus 230 ---~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 230 ---LPT-P---SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred ---cCC-c---ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 110 0 000000000001122355677789999999999999988876
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.8e-20 Score=200.25 Aligned_cols=211 Identities=23% Similarity=0.356 Sum_probs=153.0
Q ss_pred HhcCCCCCcceeeeeeeeccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCC
Q 003926 527 ISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPG 606 (786)
Q Consensus 527 l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ 606 (786)
|+.+.|.|+.+++|.|.. ....+.|.+||..|+|.|.+... ...++|.....+..++++||+|+|.. |-
T Consensus 1 l~~l~h~n~~~f~g~~~~-------~~~~~~i~~~c~rGsl~D~i~~~--~~~~d~~F~~s~~rdi~~Gl~ylh~s--~i 69 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVD-------GPEMIVIWEYCSRGSLLDILSNE--DIKLDYFFILSFIRDISKGLAYLHNS--PI 69 (484)
T ss_pred CcccchhhhhhheeeEec-------CCceEEEEeeecCccHHhHHhcc--ccCccHHHHHHHHHHHHHHHHHHhcC--cc
Confidence 467899999999999986 35689999999999999999863 45799999999999999999999986 23
Q ss_pred ccccCCCCCceeecCCCcccccCCCcccccccc---cccccccccccccCccccccCC-------CCcccceeehhHHHH
Q 003926 607 VFSNNLKITDILLDQNLVAKISSYNLPLLAENA---EKVGHVIPYSGSIDPTNSARGK-------LEEKIDIYDFGLILL 676 (786)
Q Consensus 607 ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~---~~~~~~~~~~~~~aPe~~~~~~-------~t~ksDVwSfGvvl~ 676 (786)
..|+.++++|+++|..+.+|++|||+....... ..........-|.|||.+.... .+.++|||||||+++
T Consensus 70 ~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ 149 (484)
T KOG1023|consen 70 GYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMY 149 (484)
T ss_pred eeeeeeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHH
Confidence 399999999999999999999999997555321 0011111123467899876531 467899999999999
Q ss_pred HHHhCCCCCCCchhH-HHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 677 EIIVGRPLKSRKEVD-LLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 677 ElltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
|+++.+.||+..... ...+.+..... .....+-|.+... .+....+..++.+||..+|.+||++++|-..+.
T Consensus 150 ei~~r~~~~~~~~~~~~~~eii~~~~~----~~~~~~rP~i~~~--~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~ 222 (484)
T KOG1023|consen 150 EILFRSGPFDLRNLVEDPDEIILRVKK----GGSNPFRPSIELL--NELPPELLLLVARCWEEIPEKRPSIEQIRSKLL 222 (484)
T ss_pred HHHhccCccccccccCChHHHHHHHHh----cCCCCcCcchhhh--hhcchHHHHHHHHhcccChhhCccHHHHHhhhh
Confidence 999999998763221 11222222111 1111222222211 133335778888999999999999999876554
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.80 E-value=1e-19 Score=179.12 Aligned_cols=139 Identities=12% Similarity=0.134 Sum_probs=107.0
Q ss_pred cCccCCCCCceeEEEEecCCcEEEEEEecccCCC--C-------hHHH-----------------HHHHHHHhcCCCCCc
Q 003926 482 SAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCH--S-------TRNF-----------------MHHIELISKLRHRHL 535 (786)
Q Consensus 482 ~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~--~-------~~~f-----------------~~E~~~l~~l~H~NI 535 (786)
...||+|+||.||+|..++|+.||||+++..... . ...| .+|++.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 3679999999999999878999999999754221 1 1122 349999999988876
Q ss_pred ceeeeeeeeccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhh-hcCCCCCccccCCCC
Q 003926 536 VSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFL-HTGIVPGVFSNNLKI 614 (786)
Q Consensus 536 v~l~g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yL-H~~~~~~ivHrdlk~ 614 (786)
.....+.. ...+|||||++++++....... ..++......++.|++.+|.|+ |+. +|+||||||
T Consensus 82 ~~p~~~~~---------~~~~iVmE~i~g~~l~~~~~~~---~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP 146 (190)
T cd05147 82 PCPEPILL---------KSHVLVMEFIGDDGWAAPRLKD---APLSESKARELYLQVIQIMRILYQDC---RLVHADLSE 146 (190)
T ss_pred CCCcEEEe---------cCCEEEEEEeCCCCCcchhhhc---CCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCH
Confidence 43332211 1238999999998776543221 3588889999999999999999 576 999999999
Q ss_pred CceeecCCCcccccCCCccccc
Q 003926 615 TDILLDQNLVAKISSYNLPLLA 636 (786)
Q Consensus 615 ~NILld~~~~~kl~DfGl~~~~ 636 (786)
+||++++ +.+++.|||++...
T Consensus 147 ~NIli~~-~~v~LiDFG~a~~~ 167 (190)
T cd05147 147 YNLLYHD-GKLYIIDVSQSVEH 167 (190)
T ss_pred HHEEEEC-CcEEEEEccccccC
Confidence 9999984 68999999998543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.9e-20 Score=212.00 Aligned_cols=256 Identities=18% Similarity=0.246 Sum_probs=180.1
Q ss_pred ccCccCCCCCceeEEEEe-cCCcEEEEEEeccc--CCCCh----HHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 481 TSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMK--KCHST----RNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 481 ~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~----~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
..+++|.|++|.|+.... ......+.|..... ..... ..+..|..+-+.++|+|++..+..+.+. .
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~-------~ 394 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEI-------D 394 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhc-------c
Confidence 467899999998887763 33444555543311 11111 2255677788889999998887766542 2
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..+-+||||++ ||...+... ..+....+..+..|+.+|++|+|.. +|.|||+|++|+++..++.+||+|||.+
T Consensus 395 ~~~~~mE~~~~-Dlf~~~~~~---~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~ 467 (601)
T KOG0590|consen 395 GILQSMEYCPY-DLFSLVMSN---GKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAA 467 (601)
T ss_pred cchhhhhcccH-HHHHHHhcc---cccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcc
Confidence 23444999999 999998763 2477778888999999999999998 9999999999999999999999999998
Q ss_pred ccccccc-----ccccccccccccCccccccCCCCc-ccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccc
Q 003926 634 LLAENAE-----KVGHVIPYSGSIDPTNSARGKLEE-KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESA 707 (786)
Q Consensus 634 ~~~~~~~-----~~~~~~~~~~~~aPe~~~~~~~t~-ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (786)
....... ......+...|+|||......|+. ..||||.||++..|++|+.||.......... .......
T Consensus 468 ~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~-----~~~~~~~ 542 (601)
T KOG0590|consen 468 SVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF-----KTNNYSD 542 (601)
T ss_pred eeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch-----hhhcccc
Confidence 5443221 223456778899999998888876 5799999999999999999986432211100 0000000
Q ss_pred ccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 708 RRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 708 ~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
....... ..............++.++++.||.+|-|+++|++..|+..
T Consensus 543 ~~~~~~~--~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~ 590 (601)
T KOG0590|consen 543 QRNIFEG--PNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRS 590 (601)
T ss_pred ccccccC--hHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhh
Confidence 0111000 01112233445566778999999999999999999998765
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.3e-19 Score=180.19 Aligned_cols=176 Identities=14% Similarity=0.114 Sum_probs=131.1
Q ss_pred hcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHH---------HHHHHHHHhcCCCCCcceeeeeeeecc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRN---------FMHHIELISKLRHRHLVSALGHCFECY 546 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~---------f~~E~~~l~~l~H~NIv~l~g~~~~~~ 546 (786)
.++|...+++|+|+||.||.+.. ++..+|||.+........+. |.+|++.+.+++|++|.....+.....
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~ 108 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAE 108 (232)
T ss_pred hCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecc
Confidence 56789999999999999999765 46689999997654332222 689999999999999999988755321
Q ss_pred ccC-CCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcc
Q 003926 547 FDD-SSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVA 625 (786)
Q Consensus 547 ~~~-~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~ 625 (786)
... ......+|||||++|.+|.++.. ++. ....+++.++..+|+. +++|||+||+||+++.++ +
T Consensus 109 ~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~~g-i 173 (232)
T PRK10359 109 RKTLRYAHTYIMLIEYIEGVELNDMPE-------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSKNG-L 173 (232)
T ss_pred cccccccCCeEEEEEEECCccHHHhhh-------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeCCC-E
Confidence 100 01235799999999999988732 222 2355889999999998 999999999999999988 9
Q ss_pred cccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHH
Q 003926 626 KISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEI 678 (786)
Q Consensus 626 kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~El 678 (786)
++.|||........... ..+.....|+.++|+|||||++.-.
T Consensus 174 ~liDfg~~~~~~e~~a~-----------d~~vler~y~~~~di~~lg~~~~~~ 215 (232)
T PRK10359 174 RIIDLSGKRCTAQRKAK-----------DRIDLERHYGIKNEIKDLGYYLLIY 215 (232)
T ss_pred EEEECCCcccccchhhH-----------HHHHHHhHhcccccccceeEeehHH
Confidence 99999986543211111 1123334567799999999987754
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=5.3e-19 Score=203.96 Aligned_cols=207 Identities=29% Similarity=0.319 Sum_probs=168.0
Q ss_pred CCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEE
Q 003926 106 LPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLS 185 (786)
Q Consensus 106 l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 185 (786)
.++|+.|+|++|.+.. +|.. .++|+.|+|++|+++. +|. .+++|+.|+|++|+|++ +|... .+|+.|+
T Consensus 261 p~sL~~L~Ls~N~L~~-Lp~l---p~~L~~L~Ls~N~Lt~-LP~---~p~~L~~LdLS~N~L~~-Lp~lp---~~L~~L~ 328 (788)
T PRK15387 261 PPGLLELSIFSNPLTH-LPAL---PSGLCKLWIFGNQLTS-LPV---LPPGLQELSVSDNQLAS-LPALP---SELCKLW 328 (788)
T ss_pred ccccceeeccCCchhh-hhhc---hhhcCEEECcCCcccc-ccc---cccccceeECCCCcccc-CCCCc---ccccccc
Confidence 3688999999999975 3432 3678899999999985 554 35789999999999985 55432 4688899
Q ss_pred ccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChh
Q 003926 186 LRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPA 265 (786)
Q Consensus 186 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~ 265 (786)
+++|++++ +|.. ..+|+.|+|++|+|++. |.+ ..+|+.|++++|.|+. +|....+|+.|++++|+|++ +|.
T Consensus 329 Ls~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~L-P~l--p~~L~~L~Ls~N~L~~-LP~l~~~L~~LdLs~N~Lt~-LP~ 399 (788)
T PRK15387 329 AYNNQLTS-LPTL---PSGLQELSVSDNQLASL-PTL--PSELYKLWAYNNRLTS-LPALPSGLKELIVSGNRLTS-LPV 399 (788)
T ss_pred cccCcccc-cccc---ccccceEecCCCccCCC-CCC--Ccccceehhhcccccc-CcccccccceEEecCCcccC-CCC
Confidence 99999985 6642 25799999999999964 443 3578899999999985 67767789999999999986 554
Q ss_pred hhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhc
Q 003926 266 EVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLA 341 (786)
Q Consensus 266 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~ 341 (786)
. .++|+.|++++|+|++ +|... .+|+.|++++|+|+ .+|..+..+++|+.|+|++|+|+|.+|..+..
T Consensus 400 l---~s~L~~LdLS~N~Lss-IP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L~~ 467 (788)
T PRK15387 400 L---PSELKELMVSGNRLTS-LPMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALRE 467 (788)
T ss_pred c---ccCCCEEEccCCcCCC-CCcch---hhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHHHH
Confidence 3 3579999999999985 67543 46889999999998 68888999999999999999999998887643
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.78 E-value=5.5e-18 Score=182.09 Aligned_cols=256 Identities=15% Similarity=0.135 Sum_probs=179.0
Q ss_pred CCCccCccCCCCCceeEEEEecC--CcEEEEEEecccCCCChHHHHHHHHHHhcCCC----CCcceeeeeeeeccccCCC
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLKN--GTFVAIRCLKMKKCHSTRNFMHHIELISKLRH----RHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~~--g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H----~NIv~l~g~~~~~~~~~~~ 551 (786)
.|...+.||+|+||.||.+.... ...+|+|.-..........+..|+.++..+.+ +++..+++... ..
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~------~~ 92 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGR------ST 92 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEecc------CC
Confidence 68889999999999999999654 35788887765433322367889999988873 47777766542 12
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCC-----Cccc
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN-----LVAK 626 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~-----~~~k 626 (786)
....|+||+.+ +-+|.++..... ...++..+.+.|+.|+..+|.++|+. +++||||||.|+++... ..+.
T Consensus 93 ~~~~~iVM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~ 167 (322)
T KOG1164|consen 93 EDFNFIVMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLY 167 (322)
T ss_pred CceeEEEEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEE
Confidence 45679999988 559999875433 45799999999999999999999997 99999999999999865 4589
Q ss_pred ccCCCcccccc---ccc-------c-cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHH
Q 003926 627 ISSYNLPLLAE---NAE-------K-VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKN 695 (786)
Q Consensus 627 l~DfGl~~~~~---~~~-------~-~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~ 695 (786)
+.|||+++... ... . .....||..|.++....+...+.+-|+||++-++.|+..|..||..........
T Consensus 168 llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~ 247 (322)
T KOG1164|consen 168 LLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKS 247 (322)
T ss_pred EEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHH
Confidence 99999997221 110 1 112347777888887777778899999999999999999999986543221111
Q ss_pred HHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 696 QLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 696 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
.+....... ...+ ...+.... +.++...+-..+..++|....+...+..
T Consensus 248 ~~~~~~~~~------~~~~--~~~~~~~~---~~~~~~~~~~~~~~~~Pdy~~~~~~l~~ 296 (322)
T KOG1164|consen 248 KFEKDPRKL------LTDR--FGDLKPEE---FAKILEYIDSLDYEDKPDYEKLAELLKD 296 (322)
T ss_pred HHHHHhhhh------cccc--ccCCChHH---HHHHHHHhhccCCcCCCCHHHHHHHHHH
Confidence 111111100 0010 11122233 3333334445788899999988877653
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.78 E-value=9.4e-19 Score=172.99 Aligned_cols=139 Identities=12% Similarity=0.154 Sum_probs=109.2
Q ss_pred cCccCCCCCceeEEEEecCCcEEEEEEecccCCC---------------------C-----hHHHHHHHHHHhcCCCCCc
Q 003926 482 SAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCH---------------------S-----TRNFMHHIELISKLRHRHL 535 (786)
Q Consensus 482 ~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~---------------------~-----~~~f~~E~~~l~~l~H~NI 535 (786)
...||+|+||.||+|+..+|+.||||+++..... . ...+.+|.+.+.+++|++|
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4679999999999999778999999998754211 0 1123578999999999987
Q ss_pred ceeeeeeeeccccCCCCceEEEEEecCCCCChhHH-hhcCCCCCCCCHHHHHHHHHHHHHHhhhhhc-CCCCCccccCCC
Q 003926 536 VSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSW-ISEGHAHQSLTWTQRISAAIGVAKGIQFLHT-GIVPGVFSNNLK 613 (786)
Q Consensus 536 v~l~g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~-l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~-~~~~~ivHrdlk 613 (786)
.....+... ..+|||||++++++... +.+ ..++......++.+++.++.|+|+ . +|+|||||
T Consensus 82 ~~p~~~~~~---------~~~lVmE~~~g~~~~~~~l~~----~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlk 145 (190)
T cd05145 82 PVPEPILLK---------KNVLVMEFIGDDGSPAPRLKD----VPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLS 145 (190)
T ss_pred CCceEEEec---------CCEEEEEEecCCCchhhhhhh----ccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCC
Confidence 544433221 24899999998865443 432 246777888999999999999999 7 99999999
Q ss_pred CCceeecCCCcccccCCCcccccc
Q 003926 614 ITDILLDQNLVAKISSYNLPLLAE 637 (786)
Q Consensus 614 ~~NILld~~~~~kl~DfGl~~~~~ 637 (786)
|+||+++ ++.+++.|||++....
T Consensus 146 P~NIll~-~~~~~liDFG~a~~~~ 168 (190)
T cd05145 146 EYNILYH-DGKPYIIDVSQAVELD 168 (190)
T ss_pred hhhEEEE-CCCEEEEEcccceecC
Confidence 9999999 7899999999986543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.77 E-value=6.2e-18 Score=209.82 Aligned_cols=264 Identities=20% Similarity=0.214 Sum_probs=153.3
Q ss_pred CEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCC
Q 003926 75 SITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSIL 154 (786)
Q Consensus 75 ~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 154 (786)
.++.|++.++.+ ..+|..| ...+|+.|+|.+|.+.. ++..+..+++|+.|+|++|...+.+|. ++.+
T Consensus 590 ~Lr~L~~~~~~l-~~lP~~f----------~~~~L~~L~L~~s~l~~-L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l 656 (1153)
T PLN03210 590 KLRLLRWDKYPL-RCMPSNF----------RPENLVKLQMQGSKLEK-LWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMA 656 (1153)
T ss_pred ccEEEEecCCCC-CCCCCcC----------CccCCcEEECcCccccc-cccccccCCCCCEEECCCCCCcCcCCc-cccC
Confidence 466677766543 2333322 23444555555554432 333444455555555554443334442 4445
Q ss_pred CCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCC-------------
Q 003926 155 TSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD------------- 221 (786)
Q Consensus 155 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~------------- 221 (786)
++|+.|+|++|.....+|..++++++|+.|++++|...+.+|..+ ++++|+.|+|++|...+.+|.
T Consensus 657 ~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~~~nL~~L~L~~n 735 (1153)
T PLN03210 657 TNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDISTNISWLDLDET 735 (1153)
T ss_pred CcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccccCCcCeeecCCC
Confidence 555555555544444455555555555555555443333444333 444455555554443333332
Q ss_pred -------CCCCCcCCEEEcccCCCC-------CCCC---ccccchhhhhccCCccCCcChhhhcCccccceeeccCcccc
Q 003926 222 -------FSGLTYLQVLDLENNALG-------PQFP---KVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFV 284 (786)
Q Consensus 222 -------~~~l~~L~~L~L~~N~l~-------~~~p---~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 284 (786)
...+++|+.|++.++... ...+ ....+|+.|++++|...+.+|..++++++|+.|+|++|...
T Consensus 736 ~i~~lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L 815 (1153)
T PLN03210 736 AIEEFPSNLRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINL 815 (1153)
T ss_pred ccccccccccccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCc
Confidence 223444444444432110 0000 01246888888888888888988999999999999887655
Q ss_pred CCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCC-cccCC
Q 003926 285 GPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYAR-NCLAA 357 (786)
Q Consensus 285 ~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~-N~l~~ 357 (786)
+.+|..+ ++++|+.|+|++|.....+|.. ..+|+.|+|++|.++ .+|..+...+++..+.+.+ |.+..
T Consensus 816 ~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~ 884 (1153)
T PLN03210 816 ETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQR 884 (1153)
T ss_pred CeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCc
Confidence 6777765 7888999999987665555543 357889999999988 6888888888899998877 44543
|
syringae 6; Provisional |
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.8e-18 Score=200.88 Aligned_cols=253 Identities=26% Similarity=0.386 Sum_probs=199.6
Q ss_pred EEeCCCCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCC
Q 003926 69 VVCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIP 148 (786)
Q Consensus 69 v~c~~~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p 148 (786)
..|...+.+.|++.+++++. +|. .+. +.|+.|+|++|.++. +|..+. ++|+.|+|++|+|+ .+|
T Consensus 173 ~~Cl~~~~~~L~L~~~~Lts-LP~---------~Ip--~~L~~L~Ls~N~Lts-LP~~l~--~nL~~L~Ls~N~Lt-sLP 236 (754)
T PRK15370 173 RDCLKNNKTELRLKILGLTT-IPA---------CIP--EQITTLILDNNELKS-LPENLQ--GNIKTLYANSNQLT-SIP 236 (754)
T ss_pred HhhcccCceEEEeCCCCcCc-CCc---------ccc--cCCcEEEecCCCCCc-CChhhc--cCCCEEECCCCccc-cCC
Confidence 36776778999998877663 332 221 478999999999985 455443 58999999999998 467
Q ss_pred ccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcC
Q 003926 149 QELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYL 228 (786)
Q Consensus 149 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L 228 (786)
..+. .+|+.|+|++|++. .+|..+. ++|+.|+|++|+++ .+|..+. ++|+.|+|++|+|++.++.+. ++|
T Consensus 237 ~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~LP~~lp--~sL 306 (754)
T PRK15370 237 ATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRTLPAHLP--SGI 306 (754)
T ss_pred hhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCccccCcccch--hhH
Confidence 6554 58999999999998 6787765 58999999999999 5787664 589999999999997544343 579
Q ss_pred CEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCC
Q 003926 229 QVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLT 308 (786)
Q Consensus 229 ~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 308 (786)
+.|++++|.++...+...++|+.|++++|.+++ +|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|+
T Consensus 307 ~~L~Ls~N~Lt~LP~~l~~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt 380 (754)
T PRK15370 307 THLNVQSNSLTALPETLPPGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALT 380 (754)
T ss_pred HHHHhcCCccccCCccccccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCC
Confidence 999999999987544456899999999999986 676654 68999999999998 5777663 68999999999999
Q ss_pred cccCccCCCCCCCCEEeCcCCcCCccCChhh----hcCCCCcEEEcCCcccCC
Q 003926 309 GKLFDDLSCNPELGFVDLSSNLLTGQLPNCL----LAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 309 g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~----~~~~~~~~~~~~~N~l~~ 357 (786)
. +|..+. ..|+.|++++|+|+ .+|..+ ...+.+..+++.+|.++.
T Consensus 381 ~-LP~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls~ 429 (754)
T PRK15370 381 N-LPENLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFSE 429 (754)
T ss_pred C-CCHhHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCccH
Confidence 5 555543 46899999999998 556543 344667889999998763
|
|
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.8e-17 Score=205.66 Aligned_cols=250 Identities=22% Similarity=0.230 Sum_probs=196.9
Q ss_pred cccccCCCC-CCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCC
Q 003926 99 FVTTLVKLP-DLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGS 177 (786)
Q Consensus 99 ~~~~l~~l~-~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 177 (786)
+|..+..++ +|+.|++.++.+ ..+|..| ...+|+.|+|++|++. .+|..+..+++|+.|+|++|...+.+|. ++.
T Consensus 580 lp~~~~~lp~~Lr~L~~~~~~l-~~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~ 655 (1153)
T PLN03210 580 LPEGFDYLPPKLRLLRWDKYPL-RCMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSM 655 (1153)
T ss_pred cCcchhhcCcccEEEEecCCCC-CCCCCcC-CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-ccc
Confidence 344555554 589999988877 4456666 5789999999999987 5788889999999999999876677874 889
Q ss_pred CCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCC
Q 003926 178 LPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKN 257 (786)
Q Consensus 178 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N 257 (786)
+++|+.|+|++|.....+|..++++++|+.|++++|...+.+|...++++|+.|+|++|.....+|....+|+.|++++|
T Consensus 656 l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i~l~sL~~L~Lsgc~~L~~~p~~~~nL~~L~L~~n 735 (1153)
T PLN03210 656 ATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLNLSGCSRLKSFPDISTNISWLDLDET 735 (1153)
T ss_pred CCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcCCCCCCCEEeCCCCCCccccccccCCcCeeecCCC
Confidence 99999999999987788999999999999999999866667776558999999999999887888888888999999999
Q ss_pred ccCCcChhhh------------------------------cCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCC
Q 003926 258 KFRSAIPAEV------------------------------SSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKL 307 (786)
Q Consensus 258 ~l~~~~p~~~------------------------------~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 307 (786)
.+.. +|..+ ...++|+.|+|++|...+.+|.+++++++|+.|+|++|..
T Consensus 736 ~i~~-lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~ 814 (1153)
T PLN03210 736 AIEE-FPSNLRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCIN 814 (1153)
T ss_pred cccc-ccccccccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCC
Confidence 8753 45432 1124677788888877777888888888888888888765
Q ss_pred CcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 308 TGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 308 ~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
.+.+|..+ .+++|+.|++++|.....+|... .++..+++++|.+..
T Consensus 815 L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~~---~nL~~L~Ls~n~i~~ 860 (1153)
T PLN03210 815 LETLPTGI-NLESLESLDLSGCSRLRTFPDIS---TNISDLNLSRTGIEE 860 (1153)
T ss_pred cCeeCCCC-CccccCEEECCCCCccccccccc---cccCEeECCCCCCcc
Confidence 55667665 67788888888876655666532 456778888877653
|
syringae 6; Provisional |
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=6.6e-18 Score=167.71 Aligned_cols=138 Identities=12% Similarity=0.196 Sum_probs=105.7
Q ss_pred CCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcC-----CCCCcceeeeeeeeccccCCCCc
Q 003926 479 FDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKL-----RHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-----~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
.+..+.||+|+||.||. .-.++.. +||++........+.+.+|+++++++ .||||++++|++.+. .+..
T Consensus 4 L~~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~----~g~g 77 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETD----CGTG 77 (210)
T ss_pred cCCcceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeC----CCCe
Confidence 34568899999999996 2233444 69988765444567899999999999 579999999988652 1123
Q ss_pred e-EEEEEec--CCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHh-hhhhcCCCCCccccCCCCCceeecC----CCcc
Q 003926 554 R-IFLIFEY--VPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGI-QFLHTGIVPGVFSNNLKITDILLDQ----NLVA 625 (786)
Q Consensus 554 ~-~~LV~Ey--~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL-~yLH~~~~~~ivHrdlk~~NILld~----~~~~ 625 (786)
. ..+|+|| +++|+|.+++.+. .++.. ..++.++..++ +|||+. +|+||||||+|||++. +..+
T Consensus 78 ~v~~~I~e~~G~~~~tL~~~l~~~----~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~ 148 (210)
T PRK10345 78 YVYDVIADFDGKPSITLTEFAEQC----RYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIP 148 (210)
T ss_pred EEEEEEecCCCCcchhHHHHHHcc----cccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcE
Confidence 3 4489999 6689999999652 24544 35577888788 999998 9999999999999974 3479
Q ss_pred cccCCC
Q 003926 626 KISSYN 631 (786)
Q Consensus 626 kl~DfG 631 (786)
+|+||+
T Consensus 149 ~LiDg~ 154 (210)
T PRK10345 149 VVCDNI 154 (210)
T ss_pred EEEECC
Confidence 999944
|
|
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.74 E-value=8.6e-20 Score=185.80 Aligned_cols=249 Identities=22% Similarity=0.205 Sum_probs=196.6
Q ss_pred CCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEccc-ccCCCCCCcccCCCCCCCEEEcc
Q 003926 109 LKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDE-NMLAGRVPDWLGSLPILAVLSLR 187 (786)
Q Consensus 109 L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls 187 (786)
-..++|..|+|+.+.|++|+.+.+|+.||||+|+|+-+-|.+|.++.+|..|-+.+ |+|+...-..|++|.+|+.|.+.
T Consensus 69 tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllN 148 (498)
T KOG4237|consen 69 TVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLN 148 (498)
T ss_pred ceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcC
Confidence 35688888888888888889999999999999998888888888888887776666 88885555788888888888888
Q ss_pred CCcCcccCCccccCCCCCCEEEccCCcCCcCCC-CCCCCCcCCEEEcccCCCCC--CCC----------cc---------
Q 003926 188 NNMFNGTLPDSFSYLENLRVLALSNNHFYGEVP-DFSGLTYLQVLDLENNALGP--QFP----------KV--------- 245 (786)
Q Consensus 188 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~--~~p----------~~--------- 245 (786)
-|++.-...+.|..|++|..|.+..|.+..... .|..+.+++.+.+..|.+-. .+| ..
T Consensus 149 an~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~p 228 (498)
T KOG4237|consen 149 ANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVSP 228 (498)
T ss_pred hhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecch
Confidence 888887777788888888888888888764433 47788888888888876310 000 00
Q ss_pred -------------------ccchhhhhccCCccCCcChh-hhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecC
Q 003926 246 -------------------GKKLVTMILSKNKFRSAIPA-EVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADN 305 (786)
Q Consensus 246 -------------------~~~L~~L~ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 305 (786)
.+.+..-..+.....+.-|. -|..+++|+.|+|++|+|+++-+.+|..+..++.|.|..|
T Consensus 229 ~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N 308 (498)
T KOG4237|consen 229 YRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRN 308 (498)
T ss_pred HHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcc
Confidence 00111122233334444454 4889999999999999999999999999999999999999
Q ss_pred CCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 306 KLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 306 ~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
+|...-...|..+..|+.|+|.+|+|+..-|..+.....+..+.+..|.+.+
T Consensus 309 ~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~C 360 (498)
T KOG4237|consen 309 KLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNC 360 (498)
T ss_pred hHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccC
Confidence 9987777778889999999999999998888888888888899998887764
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.1e-18 Score=189.25 Aligned_cols=237 Identities=17% Similarity=0.226 Sum_probs=172.5
Q ss_pred ccCCCCCceeEEEE----ecCCcEEEEEEecccCCC--ChHHHHHHHHHHhcCC-CCCcceeeeeeeeccccCCCCceEE
Q 003926 484 FMGEGSQGQMYRGR----LKNGTFVAIRCLKMKKCH--STRNFMHHIELISKLR-HRHLVSALGHCFECYFDDSSVSRIF 556 (786)
Q Consensus 484 ~iG~G~fg~Vy~~~----~~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~-H~NIv~l~g~~~~~~~~~~~~~~~~ 556 (786)
++|+|+||.|+..+ .+.|..+|.|.+++.... .......|..++..++ ||.+|++.-.+.. ....+
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt-------~~kl~ 73 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQT-------DGKLY 73 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeecc-------ccchh
Confidence 37999999998754 234788999988765432 2225667888899987 9999997654432 45689
Q ss_pred EEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccc
Q 003926 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636 (786)
Q Consensus 557 LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~ 636 (786)
++++|..+|+|...+.+. ..++......+...+|-+++++|.. +|+|||+|++||++|.+|++|+.|||+++..
T Consensus 74 l~ld~~rgg~lft~l~~~---~~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~ 147 (612)
T KOG0603|consen 74 LILDFLRGGDLFTRLSKE---VMFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEA 147 (612)
T ss_pred HhhhhcccchhhhccccC---CchHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHh
Confidence 999999999999887653 3456666666777889999999998 9999999999999999999999999998765
Q ss_pred ccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccc
Q 003926 637 ENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAV 716 (786)
Q Consensus 637 ~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 716 (786)
-..... +|+..|||||+.. .....+|.|||||+++||+||..||.. +....+... .
T Consensus 148 v~~~~~---cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~---~~~~~Il~~----~------------ 203 (612)
T KOG0603|consen 148 VKEKIA---CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG---DTMKRILKA----E------------ 203 (612)
T ss_pred Hhhhhc---ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch---HHHHHHhhh----c------------
Confidence 433222 7788999999987 456789999999999999999999876 111111110 0
Q ss_pred cccCcHHHHHHHHHHHHHhccCCCCCCCCH-----HHHHHHHHHHHH
Q 003926 717 NKACLDESLKTMMEVCVRCLLKNPAERPSV-----EDVLWNLQFAAQ 758 (786)
Q Consensus 717 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~-----~evl~~l~~~~~ 758 (786)
...+.+.....-++.......+|..|--. .|+.+|.++...
T Consensus 204 -~~~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i 249 (612)
T KOG0603|consen 204 -LEMPRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSI 249 (612)
T ss_pred -cCCchhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheee
Confidence 00122222333344556677788888543 466666665543
|
|
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.3e-19 Score=199.02 Aligned_cols=197 Identities=27% Similarity=0.325 Sum_probs=146.7
Q ss_pred CCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcc
Q 003926 155 TSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLE 234 (786)
Q Consensus 155 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~ 234 (786)
.+|+++++++|+++ .+|+|++.+.+|+.|+..+|+|+ .+|..+..+++|+.|++.+|.+.-.+|...++++|++|+|.
T Consensus 241 ~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~yip~~le~~~sL~tLdL~ 318 (1081)
T KOG0618|consen 241 LNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELEYIPPFLEGLKSLRTLDLQ 318 (1081)
T ss_pred ccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhhhCCCcccccceeeeeeeh
Confidence 57888889999888 56699999999999999999985 67888888888888888888888777777779999999999
Q ss_pred cCCCCCCCCcc----------------------------ccchhhhhccCCccCCcChhhhcCccccceeeccCccccCC
Q 003926 235 NNALGPQFPKV----------------------------GKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGP 286 (786)
Q Consensus 235 ~N~l~~~~p~~----------------------------~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 286 (786)
.|+|...++.. ...|+.|++.+|.|+...-..+.++++|+.|+|++|+|...
T Consensus 319 ~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~f 398 (1081)
T KOG0618|consen 319 SNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSF 398 (1081)
T ss_pred hccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccC
Confidence 99885433210 12467788888888777666777788888888888888754
Q ss_pred CchhhCCCCCCcEEEeecCCCCcc----------------------cCccCCCCCCCCEEeCcCCcCCccCChhhhcCCC
Q 003926 287 FPQALLSLPSITYLNIADNKLTGK----------------------LFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSK 344 (786)
Q Consensus 287 ~p~~~~~l~~L~~L~l~~N~l~g~----------------------~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~ 344 (786)
....+.++..|+.|+||+|+|+.. .| .+..++.|+.+|+|.|+++...-......++
T Consensus 399 pas~~~kle~LeeL~LSGNkL~~Lp~tva~~~~L~tL~ahsN~l~~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~ 477 (1081)
T KOG0618|consen 399 PASKLRKLEELEELNLSGNKLTTLPDTVANLGRLHTLRAHSNQLLSFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPN 477 (1081)
T ss_pred CHHHHhchHHhHHHhcccchhhhhhHHHHhhhhhHHHhhcCCceeech-hhhhcCcceEEecccchhhhhhhhhhCCCcc
Confidence 445567788888888888887631 23 5667777888888888876432222222366
Q ss_pred CcEEEcCCcc
Q 003926 345 NRVVLYARNC 354 (786)
Q Consensus 345 ~~~~~~~~N~ 354 (786)
++.+++++|.
T Consensus 478 LkyLdlSGN~ 487 (1081)
T KOG0618|consen 478 LKYLDLSGNT 487 (1081)
T ss_pred cceeeccCCc
Confidence 7788888775
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.9e-17 Score=160.86 Aligned_cols=181 Identities=12% Similarity=0.077 Sum_probs=129.7
Q ss_pred CccCccCCCCCceeEEEEecCCcEEEEEEecccCCCC----hHHHHHHHHHHhcCC-CCCcceeeeeeeeccccCCCCce
Q 003926 480 DTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHS----TRNFMHHIELISKLR-HRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 480 ~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~----~~~f~~E~~~l~~l~-H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
.....|++|+||+||.+.. .+..++.+.+.....-. ...|.+|+++|++++ |++|.+++++. .
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~-----------~ 72 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWD-----------G 72 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEc-----------C
Confidence 3457899999999997766 57788877776543211 124889999999995 57898888752 2
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCC-CCCceeecCCCcccccCCCcc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNL-KITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdl-k~~NILld~~~~~kl~DfGl~ 633 (786)
.+++|||+++.+|.+.+.. ....+..++++++.|+|+. +|+|||| ||.|||++.++.++|.|||++
T Consensus 73 ~~lvmeyI~G~~L~~~~~~----------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A 139 (218)
T PRK12274 73 RHLDRSYLAGAAMYQRPPR----------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLA 139 (218)
T ss_pred EEEEEeeecCccHHhhhhh----------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCc
Confidence 5899999999998765421 1134677899999999998 9999999 799999999999999999999
Q ss_pred ccccccccc---------c-----cccccccccCcccccc-CCCC-cccceeehhHHHHHHHhCCCCC
Q 003926 634 LLAENAEKV---------G-----HVIPYSGSIDPTNSAR-GKLE-EKIDIYDFGLILLEIIVGRPLK 685 (786)
Q Consensus 634 ~~~~~~~~~---------~-----~~~~~~~~~aPe~~~~-~~~t-~ksDVwSfGvvl~ElltG~~p~ 685 (786)
......... . -...++.+++|+.... ...+ ...+.++-|.-+|.++||+.+.
T Consensus 140 ~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~ 207 (218)
T PRK12274 140 VRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLH 207 (218)
T ss_pred eecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCc
Confidence 744322110 0 0112334445543211 1122 3457889999999999998774
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.4e-19 Score=163.89 Aligned_cols=130 Identities=36% Similarity=0.525 Sum_probs=61.9
Q ss_pred CCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEE
Q 003926 105 KLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVL 184 (786)
Q Consensus 105 ~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 184 (786)
+++..+.|.|++|.++.. |+.+..|.+|++|++++|++. .+|..++.+++|+.|++..|++. ..|..|+.++.|++|
T Consensus 31 ~~s~ITrLtLSHNKl~~v-ppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levl 107 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLTVV-PPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVL 107 (264)
T ss_pred chhhhhhhhcccCceeec-CCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhh
Confidence 344444455555555433 233455555555555555554 34444555555555555555543 444455555555555
Q ss_pred EccCCcCcc-cCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCC
Q 003926 185 SLRNNMFNG-TLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNA 237 (786)
Q Consensus 185 ~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~ 237 (786)
||.+|+++. .+|..|..++.|+.|+|+.|.|.-.+|+++.+++|+.|.+.+|.
T Consensus 108 dltynnl~e~~lpgnff~m~tlralyl~dndfe~lp~dvg~lt~lqil~lrdnd 161 (264)
T KOG0617|consen 108 DLTYNNLNENSLPGNFFYMTTLRALYLGDNDFEILPPDVGKLTNLQILSLRDND 161 (264)
T ss_pred hccccccccccCCcchhHHHHHHHHHhcCCCcccCChhhhhhcceeEEeeccCc
Confidence 555444432 24444444444444444444444444444444444444444443
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.2e-19 Score=191.20 Aligned_cols=252 Identities=27% Similarity=0.246 Sum_probs=155.8
Q ss_pred ccCCCCCCCEEEccCCCCccC----CCccCCCCCCCCEEeccCCCCCC------CCCccccCCCCCcEEEcccccCCCCC
Q 003926 102 TLVKLPDLKVLRLVSLGLWGP----LSGKISRLSSLEILNMSSNFLNG------AIPQELSILTSLQTLILDENMLAGRV 171 (786)
Q Consensus 102 ~l~~l~~L~~L~L~~n~l~g~----~~~~~~~l~~L~~L~Ls~N~l~~------~~p~~~~~l~~L~~L~L~~N~l~~~~ 171 (786)
.+..++.|+.|+++++.++.. ++..+...++|+.|++++|.+.+ .++..+..+++|+.|+|++|.+.+..
T Consensus 18 ~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~ 97 (319)
T cd00116 18 LLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDG 97 (319)
T ss_pred HHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhH
Confidence 344556677777777777442 45556666777777777777652 23345666777777777777776655
Q ss_pred CcccCCCCC---CCEEEccCCcCcc----cCCccccCC-CCCCEEEccCCcCCcCCC-----CCCCCCcCCEEEcccCCC
Q 003926 172 PDWLGSLPI---LAVLSLRNNMFNG----TLPDSFSYL-ENLRVLALSNNHFYGEVP-----DFSGLTYLQVLDLENNAL 238 (786)
Q Consensus 172 p~~~~~l~~---L~~L~Ls~N~l~~----~~p~~~~~l-~~L~~L~Ls~N~l~~~~p-----~~~~l~~L~~L~L~~N~l 238 (786)
+..+..+.+ |+.|++++|.+++ .+...+..+ ++|+.|+|++|.+++... .+..+++|++|++++|.+
T Consensus 98 ~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l 177 (319)
T cd00116 98 CGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGI 177 (319)
T ss_pred HHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCC
Confidence 555555554 7777777777762 233344555 777777887777774321 255566777777777777
Q ss_pred CCCC----Ccc---ccchhhhhccCCccCCc----ChhhhcCccccceeeccCccccCCCchhhC-----CCCCCcEEEe
Q 003926 239 GPQF----PKV---GKKLVTMILSKNKFRSA----IPAEVSSYYQLQRLDLSSNRFVGPFPQALL-----SLPSITYLNI 302 (786)
Q Consensus 239 ~~~~----p~~---~~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~l 302 (786)
++.. +.. ..+|+.|++++|.+++. ++..+..+++|+.|++++|.+++.....+. ..+.|+.|++
T Consensus 178 ~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l 257 (319)
T cd00116 178 GDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSL 257 (319)
T ss_pred chHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEc
Confidence 6421 111 13677777777776543 233455677788888888887753333222 2367888888
Q ss_pred ecCCCCc----ccCccCCCCCCCCEEeCcCCcCCcc----CChhhhcC-CCCcEEEcCCc
Q 003926 303 ADNKLTG----KLFDDLSCNPELGFVDLSSNLLTGQ----LPNCLLAG-SKNRVVLYARN 353 (786)
Q Consensus 303 ~~N~l~g----~~~~~~~~~~~L~~l~ls~N~l~g~----~p~~~~~~-~~~~~~~~~~N 353 (786)
++|.++. .+...+..++.|+.+++++|.++.. +...+... +.+..+++..|
T Consensus 258 ~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (319)
T cd00116 258 SCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDD 317 (319)
T ss_pred cCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCC
Confidence 8888762 2334455557788888888888743 33233222 44555555544
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.5e-19 Score=162.32 Aligned_cols=162 Identities=30% Similarity=0.502 Sum_probs=122.8
Q ss_pred CCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCC
Q 003926 127 ISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLR 206 (786)
Q Consensus 127 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 206 (786)
+.++++++.|-||+|+++ .+|+.+..+.+|+.|++++|++. .+|.+++++++|+.|+++-|++. .+|..|+.++.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 446777888889999988 56777888888888888888887 67888888888888888888887 6788888888888
Q ss_pred EEEccCCcCCcC-CCC-CCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhhcCccccceeeccCcccc
Q 003926 207 VLALSNNHFYGE-VPD-FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFV 284 (786)
Q Consensus 207 ~L~Ls~N~l~~~-~p~-~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 284 (786)
.|||++|++... +|. |..+ +.|+.|+|+.|.| ..+|..++++++|+.|.+..|.+-
T Consensus 106 vldltynnl~e~~lpgnff~m---------------------~tlralyl~dndf-e~lp~dvg~lt~lqil~lrdndll 163 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFFYM---------------------TTLRALYLGDNDF-EILPPDVGKLTNLQILSLRDNDLL 163 (264)
T ss_pred hhhccccccccccCCcchhHH---------------------HHHHHHHhcCCCc-ccCChhhhhhcceeEEeeccCchh
Confidence 888888877532 222 3333 3455666666666 467888888888888888888877
Q ss_pred CCCchhhCCCCCCcEEEeecCCCCcccCccC
Q 003926 285 GPFPQALLSLPSITYLNIADNKLTGKLFDDL 315 (786)
Q Consensus 285 ~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~ 315 (786)
.+|..++.+..|+.|.+.+|+++- +|+++
T Consensus 164 -~lpkeig~lt~lrelhiqgnrl~v-lppel 192 (264)
T KOG0617|consen 164 -SLPKEIGDLTRLRELHIQGNRLTV-LPPEL 192 (264)
T ss_pred -hCcHHHHHHHHHHHHhcccceeee-cChhh
Confidence 578888888888888888888873 34333
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.70 E-value=7e-18 Score=191.26 Aligned_cols=245 Identities=18% Similarity=0.229 Sum_probs=170.8
Q ss_pred CCCccCccCCCCCceeEEEEecCCcEEEEEEecccCC-CChHHHHHHHHH--HhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKC-HSTRNFMHHIEL--ISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~-~~~~~f~~E~~~--l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
++...+.+|.+.|=+|.||+.+.|. |+||++-+.+. -..+.|.++++- ....+|||++++.-.-.. ...
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t-------~kA 95 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVT-------DKA 95 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHh-------hHH
Confidence 4556788999999999999998886 88999876553 334556554443 455699999998754322 345
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.|||=+|..+ +|+|.|..+ .-+...+..-|+.|+..|+.-+|.. +|+|+|||.+|||+..-..+.|+||.--+
T Consensus 96 AylvRqyvkh-nLyDRlSTR---PFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFK 168 (1431)
T KOG1240|consen 96 AYLVRQYVKH-NLYDRLSTR---PFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFK 168 (1431)
T ss_pred HHHHHHHHhh-hhhhhhccc---hHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccC
Confidence 6888899976 999998753 3467778888999999999999997 99999999999999998889999997642
Q ss_pred c---cccc-cccc----cccccccccCccccccC-----------CCCcccceeehhHHHHHHHh-CCCCCCCchhHHHH
Q 003926 635 L---AENA-EKVG----HVIPYSGSIDPTNSARG-----------KLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLK 694 (786)
Q Consensus 635 ~---~~~~-~~~~----~~~~~~~~~aPe~~~~~-----------~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~ 694 (786)
- .++. .... +...-.-|+|||.+... ..+.+.||||.|||+.||++ |+|+|.-.. +.
T Consensus 169 PtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQ---L~ 245 (1431)
T KOG1240|consen 169 PTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQ---LL 245 (1431)
T ss_pred CccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHH---HH
Confidence 1 1111 1111 11111347999976541 15678999999999999998 799886321 11
Q ss_pred HHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 003926 695 NQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWN 752 (786)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 752 (786)
.+-.......+.-.+.+.|+ .+..++..+++.||++|-++++.++.
T Consensus 246 aYr~~~~~~~e~~Le~Ied~------------~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 246 AYRSGNADDPEQLLEKIEDV------------SLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred hHhccCccCHHHHHHhCcCc------------cHHHHHHHHHccCchhccCHHHHHHh
Confidence 11000000011111222222 23467778999999999999999976
|
|
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.70 E-value=6.8e-19 Score=196.57 Aligned_cols=216 Identities=32% Similarity=0.453 Sum_probs=163.0
Q ss_pred CCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEcc
Q 003926 108 DLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLR 187 (786)
Q Consensus 108 ~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 187 (786)
+|++++++.|++++.. +.++.+.+|+.|+..+|+|+ .+|..+...++|+.|.+.+|.++ -+|.....+++|++|+|.
T Consensus 242 nl~~~dis~n~l~~lp-~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~ 318 (1081)
T KOG0618|consen 242 NLQYLDISHNNLSNLP-EWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQ 318 (1081)
T ss_pred cceeeecchhhhhcch-HHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeeh
Confidence 5677777777776653 66777777777777777774 56666666666777666666665 455566666667777776
Q ss_pred CCcCcccCCccc--------------------------cCCCCCCEEEccCCcCCc-CCCCCCCCCcCCEEEcccCCCCC
Q 003926 188 NNMFNGTLPDSF--------------------------SYLENLRVLALSNNHFYG-EVPDFSGLTYLQVLDLENNALGP 240 (786)
Q Consensus 188 ~N~l~~~~p~~~--------------------------~~l~~L~~L~Ls~N~l~~-~~p~~~~l~~L~~L~L~~N~l~~ 240 (786)
.|+|. .+|+.| ..++.|+.|++.+|+|+. .+|.+-+..+|++|+|++|+|..
T Consensus 319 ~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~ 397 (1081)
T KOG0618|consen 319 SNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNS 397 (1081)
T ss_pred hcccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeeccccccc
Confidence 66665 333221 123456778888999886 46778899999999999999964
Q ss_pred CCCcc----ccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCC
Q 003926 241 QFPKV----GKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLS 316 (786)
Q Consensus 241 ~~p~~----~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~ 316 (786)
+|.. +..|++|+||+|+++ .+|..+.++..|+.|...+|+|. .+| .+..+++|+.+|++.|+|+...-....
T Consensus 398 -fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~ 473 (1081)
T KOG0618|consen 398 -FPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEAL 473 (1081)
T ss_pred -CCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhC
Confidence 4443 357899999999996 58899999999999999999998 677 899999999999999999865444433
Q ss_pred CCCCCCEEeCcCCcC
Q 003926 317 CNPELGFVDLSSNLL 331 (786)
Q Consensus 317 ~~~~L~~l~ls~N~l 331 (786)
..++|++|||++|.-
T Consensus 474 p~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 474 PSPNLKYLDLSGNTR 488 (1081)
T ss_pred CCcccceeeccCCcc
Confidence 448999999999984
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.2e-16 Score=163.02 Aligned_cols=200 Identities=18% Similarity=0.207 Sum_probs=133.6
Q ss_pred CCCCcceeeeeeeecccc--------------------CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHH
Q 003926 531 RHRHLVSALGHCFECYFD--------------------DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAI 590 (786)
Q Consensus 531 ~H~NIv~l~g~~~~~~~~--------------------~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~ 590 (786)
+|||||++.+++.+.... ...+..+|+||.-++. +|++++..+ ..+...+.-|..
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~----~~s~r~~~~~la 348 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTR----HRSYRTGRVILA 348 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcC----CCchHHHHHHHH
Confidence 699999999987642100 0123468999998876 999999864 355566777889
Q ss_pred HHHHHhhhhhcCCCCCccccCCCCCceee--cCCC--cccccCCCccccccc-------ccccccccccccccCcccccc
Q 003926 591 GVAKGIQFLHTGIVPGVFSNNLKITDILL--DQNL--VAKISSYNLPLLAEN-------AEKVGHVIPYSGSIDPTNSAR 659 (786)
Q Consensus 591 ~ia~gL~yLH~~~~~~ivHrdlk~~NILl--d~~~--~~kl~DfGl~~~~~~-------~~~~~~~~~~~~~~aPe~~~~ 659 (786)
|+.+|+.|||.+ +|.|||+|+.|||+ |+|. ...|+|||.+...+. ........|....||||+...
T Consensus 349 QlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta 425 (598)
T KOG4158|consen 349 QLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATA 425 (598)
T ss_pred HHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhc
Confidence 999999999998 99999999999996 4554 357899998643322 111122345566799998643
Q ss_pred C--C---C-CcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHH
Q 003926 660 G--K---L-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCV 733 (786)
Q Consensus 660 ~--~---~-t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~ 733 (786)
. . . -.|+|.|+.|-+.||+++..-||.......+... .. .+... |.++..++ ..+.+++.
T Consensus 426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r---~Y--qe~qL-----Palp~~vp----p~~rqlV~ 491 (598)
T KOG4158|consen 426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTR---TY--QESQL-----PALPSRVP----PVARQLVF 491 (598)
T ss_pred CCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechh---hh--hhhhC-----CCCcccCC----hHHHHHHH
Confidence 2 1 1 2589999999999999999988865322111100 00 11111 22222233 24456677
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 003926 734 RCLLKNPAERPSVEDVLWN 752 (786)
Q Consensus 734 ~Cl~~dP~~RPt~~evl~~ 752 (786)
..++.||++|++..-....
T Consensus 492 ~lL~r~pskRvsp~iAANv 510 (598)
T KOG4158|consen 492 DLLKRDPSKRVSPNIAANV 510 (598)
T ss_pred HHhcCCccccCCccHHHhH
Confidence 7899999999997655443
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.68 E-value=4e-17 Score=167.24 Aligned_cols=237 Identities=16% Similarity=0.188 Sum_probs=146.8
Q ss_pred ccCccCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHHHHHHHhcCCC-----------CCcceeeeeeeec
Q 003926 481 TSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRH-----------RHLVSALGHCFEC 545 (786)
Q Consensus 481 ~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H-----------~NIv~l~g~~~~~ 545 (786)
..+.||.|+++.||.++.. +|+.+|||....... ...+++.+|.-....+.+ .-++++--.-...
T Consensus 16 ~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~ 95 (288)
T PF14531_consen 16 RGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPG 95 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETT
T ss_pred EccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcC
Confidence 4678999999999999964 699999998865442 224567777765555433 1222211111100
Q ss_pred --cc--cCCCCc-----eEEEEEecCCCCChhHHhhc----CCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCC
Q 003926 546 --YF--DDSSVS-----RIFLIFEYVPNGTLRSWISE----GHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNL 612 (786)
Q Consensus 546 --~~--~~~~~~-----~~~LV~Ey~~~GsL~~~l~~----~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdl 612 (786)
.+ ...+.+ ..+++|+-+. +||.+++.. ......+....|+.+..|+++-+++||+. ++||+||
T Consensus 96 ~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVHgdi 171 (288)
T PF14531_consen 96 KPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVHGDI 171 (288)
T ss_dssp S-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEEST-
T ss_pred CCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEeccc
Confidence 00 000011 2467888774 599887542 11122356677888899999999999998 9999999
Q ss_pred CCCceeecCCCcccccCCCcccccccccccccccccccccCcccccc--------CCCCcccceeehhHHHHHHHhCCCC
Q 003926 613 KITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSAR--------GKLEEKIDIYDFGLILLEIIVGRPL 684 (786)
Q Consensus 613 k~~NILld~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~--------~~~t~ksDVwSfGvvl~ElltG~~p 684 (786)
|++|++++.+|.+.++||+........ ......+.++.+||.... -.+|.+.|.|++|+++|.|++|+.|
T Consensus 172 ~~~nfll~~~G~v~Lg~F~~~~r~g~~--~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lP 249 (288)
T PF14531_consen 172 KPENFLLDQDGGVFLGDFSSLVRAGTR--YRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLP 249 (288)
T ss_dssp SGGGEEE-TTS-EEE--GGGEEETTEE--EEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-S
T ss_pred ceeeEEEcCCCCEEEcChHHHeecCce--eeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCC
Confidence 999999999999999999875433221 111223356778886533 2478899999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCC
Q 003926 685 KSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAER 743 (786)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~R 743 (786)
|+....... ++..-..|. +.+..+..++...|+.+|.+|
T Consensus 250 f~~~~~~~~-------------------~~~~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 250 FGLSSPEAD-------------------PEWDFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp TCCCGGGST-------------------SGGGGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred CCCCCcccc-------------------ccccchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 975432110 000223455 666677788889999999988
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.3e-16 Score=162.65 Aligned_cols=141 Identities=11% Similarity=0.101 Sum_probs=108.2
Q ss_pred CCCccCccCCCCCceeEEEE--ecCCcEEEEEEecccCCC-------------------C-----hHHHHHHHHHHhcCC
Q 003926 478 NFDTSAFMGEGSQGQMYRGR--LKNGTFVAIRCLKMKKCH-------------------S-----TRNFMHHIELISKLR 531 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~--~~~g~~vAvK~l~~~~~~-------------------~-----~~~f~~E~~~l~~l~ 531 (786)
.|+..+.||+|+||.||+|+ ..+|+.||||+++..... . ...+.+|++.+.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 46778899999999999998 568999999998754210 0 123568999999997
Q ss_pred CCC--cceeeeeeeeccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCC-cc
Q 003926 532 HRH--LVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPG-VF 608 (786)
Q Consensus 532 H~N--Iv~l~g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~-iv 608 (786)
|.. +.+++++ ...++||||+++++|..+.... ..+...+...++.|++.++.|||.. + |+
T Consensus 109 ~~~i~~p~~~~~-----------~~~~lV~E~~~g~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---g~ii 171 (237)
T smart00090 109 EAGVPVPKPIAW-----------RRNVLVMEFIGGDGLPAPRLKD---VEPEEEEEFELYDDILEEMRKLYKE---GELV 171 (237)
T ss_pred hcCCCCCeeeEe-----------cCceEEEEEecCCccccccccc---CCcchHHHHHHHHHHHHHHHHHHhc---CCEE
Confidence 643 2333321 1248999999999887764321 2345556678999999999999997 8 99
Q ss_pred ccCCCCCceeecCCCcccccCCCccccc
Q 003926 609 SNNLKITDILLDQNLVAKISSYNLPLLA 636 (786)
Q Consensus 609 Hrdlk~~NILld~~~~~kl~DfGl~~~~ 636 (786)
|||+||+||+++ ++.+++.|||.+...
T Consensus 172 H~Dikp~NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 172 HGDLSEYNILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred eCCCChhhEEEE-CCCEEEEEChhhhcc
Confidence 999999999999 788999999987543
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.9e-16 Score=157.88 Aligned_cols=143 Identities=14% Similarity=0.139 Sum_probs=109.8
Q ss_pred HHHHHhcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCC----------------------ChHHHHHHHHHHh
Q 003926 471 ELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCH----------------------STRNFMHHIELIS 528 (786)
Q Consensus 471 ~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~----------------------~~~~f~~E~~~l~ 528 (786)
++......|...+.||+|+||.||+|..++|+.||||++...... ....+.+|..++.
T Consensus 9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 88 (198)
T cd05144 9 TLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALK 88 (198)
T ss_pred HHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHH
Confidence 444444446778999999999999999888999999987643210 0123677899999
Q ss_pred cCCCCC--cceeeeeeeeccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCC
Q 003926 529 KLRHRH--LVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPG 606 (786)
Q Consensus 529 ~l~H~N--Iv~l~g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ 606 (786)
++.|++ +...++. ...++||||+++++|.+.... .....++.+++.++.++|+. +
T Consensus 89 ~l~~~~i~v~~~~~~-----------~~~~lv~e~~~g~~L~~~~~~---------~~~~~~~~~i~~~l~~lh~~---g 145 (198)
T cd05144 89 ALYEEGFPVPKPIDW-----------NRHAVVMEYIDGVELYRVRVL---------EDPEEVLDEILEEIVKAYKH---G 145 (198)
T ss_pred HHHHcCCCCCceeec-----------CCceEEEEEeCCcchhhcccc---------ccHHHHHHHHHHHHHHHHHC---C
Confidence 998874 3333331 235899999999999765431 22456788999999999996 9
Q ss_pred ccccCCCCCceeecCCCcccccCCCccccc
Q 003926 607 VFSNNLKITDILLDQNLVAKISSYNLPLLA 636 (786)
Q Consensus 607 ivHrdlk~~NILld~~~~~kl~DfGl~~~~ 636 (786)
|+||||||+||++++++.++|+|||.+...
T Consensus 146 i~H~Dl~p~Nill~~~~~~~liDfg~~~~~ 175 (198)
T cd05144 146 IIHGDLSEFNILVDDDEKIYIIDWPQMVST 175 (198)
T ss_pred CCcCCCCcccEEEcCCCcEEEEECCccccC
Confidence 999999999999999999999999997433
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.6e-16 Score=158.67 Aligned_cols=134 Identities=13% Similarity=0.295 Sum_probs=110.1
Q ss_pred CccCCCCCceeEEEEecCCcEEEEEEecccCCCC--------hHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 483 AFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHS--------TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~--------~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
+.||+|++|.||+|+. +|..|+||+........ ...+.+|++++..++|++|.....++.. .+.
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~-------~~~ 73 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVD-------PEN 73 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEe-------CCC
Confidence 5789999999999987 57789999866433211 2357899999999999998877666543 234
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++||||+++++|.+++... .+ .+..++.+++.+|.++|+. +++|||++|.||+++ ++.+++.|||.+.
T Consensus 74 ~~lv~e~~~G~~L~~~~~~~------~~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~ 142 (211)
T PRK14879 74 FIIVMEYIEGEPLKDLINSN------GM-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAE 142 (211)
T ss_pred CEEEEEEeCCcCHHHHHHhc------cH-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCccc
Confidence 68999999999999998642 22 7888999999999999997 999999999999999 7889999999864
Q ss_pred c
Q 003926 635 L 635 (786)
Q Consensus 635 ~ 635 (786)
.
T Consensus 143 ~ 143 (211)
T PRK14879 143 F 143 (211)
T ss_pred C
Confidence 3
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.66 E-value=7.5e-16 Score=154.00 Aligned_cols=207 Identities=13% Similarity=0.164 Sum_probs=154.8
Q ss_pred CCCccCccCCCCCceeEEEE-ecCCcEEEEEEecccCCCChHHHHHHHHHHhcCC-CCCcceeeeeeeeccccCCCCceE
Q 003926 478 NFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLR-HRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
.|..++.||+|+||+++.|+ +-+++.||||.=.... ..-+...|....+.|. -+.|-.++-|-. .+-+-
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGq-------eG~~N 99 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQ-------EGKYN 99 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeecc-------ccchh
Confidence 57889999999999999998 6679999999643222 2334556666666653 566666543322 23455
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC-----cccccCC
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL-----VAKISSY 630 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~-----~~kl~Df 630 (786)
.||+|.+ +-||.|+..-+ ...++..+..-+|+|++.-++|+|+. ..|.|||||+|.||..-+ .+.+.||
T Consensus 100 iLVidLL-GPSLEDLFD~C--gR~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDF 173 (449)
T KOG1165|consen 100 ILVIDLL-GPSLEDLFDLC--GRRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDF 173 (449)
T ss_pred hhhhhhh-CcCHHHHHHHh--cCcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEec
Confidence 7999998 45888877543 24689999999999999999999998 999999999999998544 4689999
Q ss_pred Ccccccccccc--------cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHH
Q 003926 631 NLPLLAENAEK--------VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQA 699 (786)
Q Consensus 631 Gl~~~~~~~~~--------~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~ 699 (786)
|+++...+..+ .....||..||.--.-.+..-+.+-|.=|+|-|....+-|..||++...+......+.
T Consensus 174 GmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeK 250 (449)
T KOG1165|consen 174 GMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEK 250 (449)
T ss_pred cchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHH
Confidence 99986654332 2234677788876665566667788999999999999999999987655544444433
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.66 E-value=7.3e-17 Score=171.89 Aligned_cols=248 Identities=17% Similarity=0.278 Sum_probs=159.6
Q ss_pred ccCccCCCCCceeEEEEecC----CcEEEEEEecccC-CCChHHHHHHHHHHhcC-CCCCcceeeee--eeeccccCCC-
Q 003926 481 TSAFMGEGSQGQMYRGRLKN----GTFVAIRCLKMKK-CHSTRNFMHHIELISKL-RHRHLVSALGH--CFECYFDDSS- 551 (786)
Q Consensus 481 ~~~~iG~G~fg~Vy~~~~~~----g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~NIv~l~g~--~~~~~~~~~~- 551 (786)
..+..++.+++.+..+.... .+.++.|..+..+ +.....| +++-.+... +|++.+ +... ..........
T Consensus 248 ~~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~d~~~~~~~~~-r~~~~l~~~~~~~~s~-~~d~~~s~~~~~~~~~v 325 (516)
T KOG1033|consen 248 ISKSSERVSSGIVFEKQGKNNSSLREWLKSKRADVDSLCACKYTF-RQLGVLVDSSHSNRSI-LEDLRPSLFESSKRNKV 325 (516)
T ss_pred ccccccccccCCchhhhhcccchhhhhccchhhhccchhhhhhhh-hhhhheeccccCCccc-ccCCCCchhhhcccccc
Confidence 34556677777777665332 3455555555444 2222233 334444444 444433 2220 0000000001
Q ss_pred --CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccC
Q 003926 552 --VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISS 629 (786)
Q Consensus 552 --~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 629 (786)
...+|+.|++|..++|.+||...+.....+|...+.++.|++.|+.| . +.+|||+||.||....+..+||.|
T Consensus 326 ~~~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgD 399 (516)
T KOG1033|consen 326 GKKVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGD 399 (516)
T ss_pred ccccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhh
Confidence 12478999999999999999866556678899999999999999999 3 889999999999999999999999
Q ss_pred CCccccccccc-------ccccccccccccCccccccCCCCcccceeehhHHHHHHHhC-CCCCCCchhHHHHHHHHHHH
Q 003926 630 YNLPLLAENAE-------KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVG-RPLKSRKEVDLLKNQLQAVV 701 (786)
Q Consensus 630 fGl~~~~~~~~-------~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG-~~p~~~~~~~~~~~~~~~~~ 701 (786)
||+........ ......++..||+||.+.+..|+.|+||||+|++|+|+++- ...+.... ..
T Consensus 400 Fgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~----------t~ 469 (516)
T KOG1033|consen 400 FGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIA----------TL 469 (516)
T ss_pred hhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHH----------hh
Confidence 99975443333 33445678899999999999999999999999999999861 11111100 00
Q ss_pred HhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 702 TADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 702 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
.. .....++|......+.+ ..++.+.+.+.|.+||++.++..+.+
T Consensus 470 ~d---~r~g~ip~~~~~d~p~e-----~~ll~~lls~~p~~RP~~~~~~~~~~ 514 (516)
T KOG1033|consen 470 TD---IRDGIIPPEFLQDYPEE-----YTLLQQLLSPSPEERPSAIEVALHEF 514 (516)
T ss_pred hh---hhcCCCChHHhhcCcHH-----HHHHHHhcCCCcccCchHHHHhhhhh
Confidence 00 01112222222222222 35667899999999997776665543
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=99.66 E-value=6.9e-18 Score=181.73 Aligned_cols=247 Identities=24% Similarity=0.210 Sum_probs=189.5
Q ss_pred EEEccCCCCc-cCCCccCCCCCCCCEEeccCCCCCCC----CCccccCCCCCcEEEcccccCCC------CCCcccCCCC
Q 003926 111 VLRLVSLGLW-GPLSGKISRLSSLEILNMSSNFLNGA----IPQELSILTSLQTLILDENMLAG------RVPDWLGSLP 179 (786)
Q Consensus 111 ~L~L~~n~l~-g~~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~------~~p~~~~~l~ 179 (786)
.|+|..+.++ ......+..+..|+.|++++|.++.. ++..+...++|+.|++++|.+.+ .++..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 4778888887 44456677888899999999998643 56667788899999999998863 2345678899
Q ss_pred CCCEEEccCCcCcccCCccccCCCC---CCEEEccCCcCCcCCC-----CCCCC-CcCCEEEcccCCCCCCCCc----c-
Q 003926 180 ILAVLSLRNNMFNGTLPDSFSYLEN---LRVLALSNNHFYGEVP-----DFSGL-TYLQVLDLENNALGPQFPK----V- 245 (786)
Q Consensus 180 ~L~~L~Ls~N~l~~~~p~~~~~l~~---L~~L~Ls~N~l~~~~p-----~~~~l-~~L~~L~L~~N~l~~~~p~----~- 245 (786)
+|+.|++++|.+.+..+..+..+.+ |+.|++++|++++... .+..+ ++|+.|++++|.+++.... .
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~ 161 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKAL 161 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHH
Confidence 9999999999998767766666665 9999999999974211 24556 8999999999999854322 1
Q ss_pred --ccchhhhhccCCccCCc----ChhhhcCccccceeeccCccccCC----CchhhCCCCCCcEEEeecCCCCcccCccC
Q 003926 246 --GKKLVTMILSKNKFRSA----IPAEVSSYYQLQRLDLSSNRFVGP----FPQALLSLPSITYLNIADNKLTGKLFDDL 315 (786)
Q Consensus 246 --~~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~g~~~~~~ 315 (786)
..+|+.|++++|.+++. ++..+..+++|+.|+|++|.+++. ++..+..+++|+.|++++|.+++.....+
T Consensus 162 ~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l 241 (319)
T cd00116 162 RANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAAL 241 (319)
T ss_pred HhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHH
Confidence 24799999999999853 344556667999999999998743 44566788999999999999986333222
Q ss_pred C-----CCCCCCEEeCcCCcCC----ccCChhhhcCCCCcEEEcCCcccCC
Q 003926 316 S-----CNPELGFVDLSSNLLT----GQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 316 ~-----~~~~L~~l~ls~N~l~----g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
. ..+.|+.|++++|.++ ..+...+.....+..++++.|.++.
T Consensus 242 ~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~ 292 (319)
T cd00116 242 ASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGE 292 (319)
T ss_pred HHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcH
Confidence 1 2478999999999997 2344555556788999999998864
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.5e-16 Score=177.96 Aligned_cols=136 Identities=13% Similarity=0.197 Sum_probs=107.0
Q ss_pred cCCCccCccCCCCCceeEEEEecCCcEEEEEE-ecccCC-C------ChHHHHHHHHHHhcCCCCCcceeeeeeeecccc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRC-LKMKKC-H------STRNFMHHIELISKLRHRHLVSALGHCFECYFD 548 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~-l~~~~~-~------~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~ 548 (786)
..|...+.||+|+||+||+|.+.... +++|+ ...... . ..+.+.+|++++++++|++++....++..
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~---- 407 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVD---- 407 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEe----
Confidence 34456789999999999999876443 33333 222111 1 12468899999999999999887766553
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCccccc
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKIS 628 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~ 628 (786)
....++||||+++++|.+++. .+..++.+++++|.|||+. +++|||+||+||++ .++.++|+
T Consensus 408 ---~~~~~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~li 469 (535)
T PRK09605 408 ---PEEKTIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLI 469 (535)
T ss_pred ---CCCCEEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEE
Confidence 234689999999999998875 3467899999999999997 99999999999999 57789999
Q ss_pred CCCcccc
Q 003926 629 SYNLPLL 635 (786)
Q Consensus 629 DfGl~~~ 635 (786)
|||+++.
T Consensus 470 DFGla~~ 476 (535)
T PRK09605 470 DFGLGKY 476 (535)
T ss_pred eCccccc
Confidence 9999754
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.64 E-value=5.6e-16 Score=154.68 Aligned_cols=130 Identities=16% Similarity=0.271 Sum_probs=103.4
Q ss_pred ccCCCCCceeEEEEecCCcEEEEEEecccCCCC--------hHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 484 FMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHS--------TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 484 ~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~--------~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
.||+|+||.||+|.+ +|..|++|+........ ...+.+|+++++.++|+++.....++.. .+..
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~-------~~~~ 72 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVD-------PDNK 72 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE-------CCCC
Confidence 489999999999995 46789999865432111 2457789999999999876554444432 2346
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
++||||+++++|.+++.... . .++.+++++|.++|+. +++|||++|.||+++ ++.+++.|||++..
T Consensus 73 ~lv~e~~~g~~l~~~~~~~~----~------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 73 TIVMEYIEGKPLKDVIEEGN----D------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred EEEEEEECCccHHHHHhhcH----H------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 89999999999999876421 0 7889999999999997 999999999999999 78899999998653
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.5e-15 Score=145.28 Aligned_cols=200 Identities=13% Similarity=0.139 Sum_probs=144.3
Q ss_pred hcCCCccCccCCCCCceeEEEE-ecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCC-cceeeeeeeeccccCCCCc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRH-LVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~N-Iv~l~g~~~~~~~~~~~~~ 553 (786)
...|...+.||.|+||.+|.|. ..+|+.||||.=.... ...+..-|..+.+.++|-. |-.+.-|..+ ..
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a--~hpqL~yEskvY~iL~~g~GiP~i~~y~~e-------~~ 84 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA--KHPQLLYESKVYRILQGGVGIPHIRHYGTE-------KD 84 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC--CCcchhHHHHHHHHhccCCCCchhhhhccc-------cc
Confidence 3567888999999999999998 6789999999644322 2345677888888887642 2222222222 44
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC---cccccCC
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL---VAKISSY 630 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~---~~kl~Df 630 (786)
.-.+|||.. +-||.++..-+ ...++..+.+-.|-|+..-++|+|.. ++|||||||+|.|..-+. .+.+.||
T Consensus 85 ynvlVMdLL-GPsLEdLfnfC--~R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDF 158 (341)
T KOG1163|consen 85 YNVLVMDLL-GPSLEDLFNFC--SRRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDF 158 (341)
T ss_pred cceeeeecc-CccHHHHHHHH--hhhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEec
Confidence 568999998 56999887643 23588889999999999999999998 899999999999987554 3678999
Q ss_pred Cccccccccccc--------ccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchh
Q 003926 631 NLPLLAENAEKV--------GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEV 690 (786)
Q Consensus 631 Gl~~~~~~~~~~--------~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~ 690 (786)
|+++...+..+. ....||..|.+-....+..-+.+-|+=|.|-+|...--|+.||++...
T Consensus 159 GLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka 226 (341)
T KOG1163|consen 159 GLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKA 226 (341)
T ss_pred cchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccch
Confidence 999655332211 223455555433322222335577999999999999999999987543
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.7e-15 Score=175.64 Aligned_cols=159 Identities=26% Similarity=0.374 Sum_probs=118.8
Q ss_pred cCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCCCCCccEEeCCCCEEEEEeCCCCCCCCCCCCCcCCccccccCCC
Q 003926 27 QLQSSQAQTLLRIQGLLNNPAVLSSWNITTEFCNTEPTSSLTVVCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKL 106 (786)
Q Consensus 27 ~~~~~~~~~ll~~k~~~~~~~~l~~W~~~~~~C~w~~~~~~~v~c~~~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l 106 (786)
.+.++|.+||+.+|+.+.++.. .+|+ .++|......|.||.|.....+ ..
T Consensus 368 ~t~~~~~~aL~~~k~~~~~~~~-~~W~--g~~C~p~~~~w~Gv~C~~~~~~---------------------------~~ 417 (623)
T PLN03150 368 KTLLEEVSALQTLKSSLGLPLR-FGWN--GDPCVPQQHPWSGADCQFDSTK---------------------------GK 417 (623)
T ss_pred ccCchHHHHHHHHHHhcCCccc-CCCC--CCCCCCcccccccceeeccCCC---------------------------Cc
Confidence 4567899999999999876643 4795 3566322233557999521100 01
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEc
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 186 (786)
..++.|+|++|++.|.+|..++.|++|+.|+|++|.++|.+|..++.+++|+.|+|++|+++|.+|+.+++|++|+.|+|
T Consensus 418 ~~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~L 497 (623)
T PLN03150 418 WFIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNL 497 (623)
T ss_pred eEEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEEC
Confidence 13456788888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred cCCcCcccCCccccCC-CCCCEEEccCCcC
Q 003926 187 RNNMFNGTLPDSFSYL-ENLRVLALSNNHF 215 (786)
Q Consensus 187 s~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l 215 (786)
++|.++|.+|..++.+ .++..+++++|..
T Consensus 498 s~N~l~g~iP~~l~~~~~~~~~l~~~~N~~ 527 (623)
T PLN03150 498 NGNSLSGRVPAALGGRLLHRASFNFTDNAG 527 (623)
T ss_pred cCCcccccCChHHhhccccCceEEecCCcc
Confidence 8888888888877653 3556666666654
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.2e-15 Score=177.36 Aligned_cols=196 Identities=19% Similarity=0.274 Sum_probs=149.4
Q ss_pred HHHHHhcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCC---CCCcceeeeeeeeccc
Q 003926 471 ELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLR---HRHLVSALGHCFECYF 547 (786)
Q Consensus 471 ~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~---H~NIv~l~g~~~~~~~ 547 (786)
+++..-..|.+...||+|+||+||+|...+|+.||+|.=+... .-+|.=--+++.||+ -+-|..+...+. +
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~---~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~---~ 765 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPN---PWEFYICLQVMERLKPQMLPSIMHISSAHV---F 765 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCC---ceeeeehHHHHHhhchhhhcchHHHHHHHc---c
Confidence 4444556788889999999999999998889999999755432 233433345666666 122233222221 1
Q ss_pred cCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC------
Q 003926 548 DDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ------ 621 (786)
Q Consensus 548 ~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~------ 621 (786)
.+.-+||+||.+.|+|.+++.. ...++|.-.+.++.++++-+.+||.. +|||+||||+|.+|-.
T Consensus 766 ----~~~S~lv~ey~~~Gtlld~~N~---~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~ 835 (974)
T KOG1166|consen 766 ----QNASVLVSEYSPYGTLLDLINT---NKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADS 835 (974)
T ss_pred ----CCcceeeeeccccccHHHhhcc---CCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCC
Confidence 2346899999999999999974 34689999999999999999999998 9999999999999843
Q ss_pred -CCcccccCCCccc---ccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCC
Q 003926 622 -NLVAKISSYNLPL---LAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR 682 (786)
Q Consensus 622 -~~~~kl~DfGl~~---~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~ 682 (786)
...++|.|||.+. +..+..+......+-.+-++|...+..++..+|-|.+.-+++-|+.|+
T Consensus 836 ~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~ 900 (974)
T KOG1166|consen 836 DSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGK 900 (974)
T ss_pred cccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHH
Confidence 3457999999983 333343444555666677899888888999999999999999999986
|
|
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.59 E-value=6e-17 Score=165.27 Aligned_cols=226 Identities=22% Similarity=0.207 Sum_probs=176.1
Q ss_pred CCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccC-CcCcccCCccccCCCCCCEEEc
Q 003926 132 SLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRN-NMFNGTLPDSFSYLENLRVLAL 210 (786)
Q Consensus 132 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L 210 (786)
.-..++|..|+|+.+.|.+|+.+.+|+.|||++|+|+.+-|+.|.++.+|..|-+.+ |+|+....+.|++|..|+.|.+
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLll 147 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLL 147 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhc
Confidence 457899999999999999999999999999999999999999999999988887666 9999777778999999999999
Q ss_pred cCCcCCcCCCC-CCCCCcCCEEEcccCCCCCCCCc---cccchhhhhccCCccC------------CcChhhhcCccccc
Q 003926 211 SNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPK---VGKKLVTMILSKNKFR------------SAIPAEVSSYYQLQ 274 (786)
Q Consensus 211 s~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~p~---~~~~L~~L~ls~N~l~------------~~~p~~~~~l~~L~ 274 (786)
.-|++.-...+ |..+++|..|.+-+|.+....-. ....++.+.+..|.+- -..|.+++...-..
T Consensus 148 Nan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~ 227 (498)
T KOG4237|consen 148 NANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVS 227 (498)
T ss_pred ChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecc
Confidence 99999865554 88999999999999987532221 2345666777666621 12233333322222
Q ss_pred eeecc-------------------------CccccCCCc-hhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcC
Q 003926 275 RLDLS-------------------------SNRFVGPFP-QALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSS 328 (786)
Q Consensus 275 ~L~Ls-------------------------~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~ 328 (786)
-..+. .....+.-| ..|..+++|+.|+|++|++++.-+.+|.....++.|.|..
T Consensus 228 p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~ 307 (498)
T KOG4237|consen 228 PYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTR 307 (498)
T ss_pred hHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCc
Confidence 22222 222233334 3588999999999999999999999999999999999999
Q ss_pred CcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 329 NLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 329 N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
|++...-...+.....+..+.+.+|+++.
T Consensus 308 N~l~~v~~~~f~~ls~L~tL~L~~N~it~ 336 (498)
T KOG4237|consen 308 NKLEFVSSGMFQGLSGLKTLSLYDNQITT 336 (498)
T ss_pred chHHHHHHHhhhccccceeeeecCCeeEE
Confidence 99985555566677889999999999875
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.55 E-value=3.3e-15 Score=169.93 Aligned_cols=218 Identities=20% Similarity=0.280 Sum_probs=146.5
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
..+|+..+.|..|+||.||..+++ +.+.+|.| +.++.. ++ +||..+-| .
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~l-----------il-----Rnilt~a~-------------n 131 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNL-----------IL-----RNILTFAG-------------N 131 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhc-ccccch-----------hh-----hccccccC-------------C
Confidence 467889999999999999999876 46778874 332211 11 22433322 1
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.+.| ||=...++.-. .++- +.+.+++|+|+. +|+|||+||+|.++..-|++|++|||+++
T Consensus 132 pfvv------gDc~tllk~~g---~lPv--------dmvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk 191 (1205)
T KOG0606|consen 132 PFVV------GDCATLLKNIG---PLPV--------DMVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSK 191 (1205)
T ss_pred ccee------chhhhhcccCC---CCcc--------hhhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhh
Confidence 2344 45555554311 1221 227789999997 99999999999999999999999999985
Q ss_pred ccccc----------------cccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHH
Q 003926 635 LAENA----------------EKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQ 698 (786)
Q Consensus 635 ~~~~~----------------~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~ 698 (786)
+.-.. ......++++.|+|||++..+.|...+|+|+.|+|+||.+.|+.||.+...+++...+.
T Consensus 192 ~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~vi 271 (1205)
T KOG0606|consen 192 KGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVI 271 (1205)
T ss_pred hhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhh
Confidence 43100 01124578999999999999999999999999999999999999987765555443322
Q ss_pred HHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCC---CHHHHHHHHHHH
Q 003926 699 AVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERP---SVEDVLWNLQFA 756 (786)
Q Consensus 699 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP---t~~evl~~l~~~ 756 (786)
. +. ..+.+- |+.. ..+..+++.+.++.+|..|- ..-+|-+|-+|.
T Consensus 272 s---d~-i~wpE~-dea~--------p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~ 319 (1205)
T KOG0606|consen 272 S---DD-IEWPEE-DEAL--------PPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQ 319 (1205)
T ss_pred h---hh-cccccc-CcCC--------CHHHHHHHHHHHHhChHhhcccchhhhhhhcccee
Confidence 1 11 111111 2222 23455677788999999993 344555555443
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.5e-14 Score=141.28 Aligned_cols=135 Identities=13% Similarity=0.199 Sum_probs=95.1
Q ss_pred cCccCCCCCceeEEEEecCCcEEEEEEecccCCCC--hHHH----------------------HHHHHHHhcCCCCC--c
Q 003926 482 SAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHS--TRNF----------------------MHHIELISKLRHRH--L 535 (786)
Q Consensus 482 ~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~--~~~f----------------------~~E~~~l~~l~H~N--I 535 (786)
.+.||+|+||.||+|...+|+.||||++....... ...+ ..|.+.+.++++.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 46799999999999998889999999987543211 1111 24555555554432 2
Q ss_pred ceeeeeeeeccccCCCCceEEEEEecCCCCChhHH-hhcCCCCCCCCHHHHHHHHHHHHHHhhhhhc-CCCCCccccCCC
Q 003926 536 VSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSW-ISEGHAHQSLTWTQRISAAIGVAKGIQFLHT-GIVPGVFSNNLK 613 (786)
Q Consensus 536 v~l~g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~-l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~-~~~~~ivHrdlk 613 (786)
.+.+++ ...++||||+++|++... +.... .. .....++.+++.++.++|. . +|+|||+|
T Consensus 82 ~~~~~~-----------~~~~lv~e~~~g~~~~~~~l~~~~----~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~ 142 (187)
T cd05119 82 PKPIDL-----------NRHVLVMEFIGGDGIPAPRLKDVR----LL-EDPEELYDQILELMRKLYREA---GLVHGDLS 142 (187)
T ss_pred CceEec-----------CCCEEEEEEeCCCCccChhhhhhh----hc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCC
Confidence 332221 235899999999654321 21110 11 4567889999999999998 5 99999999
Q ss_pred CCceeecCCCcccccCCCccccc
Q 003926 614 ITDILLDQNLVAKISSYNLPLLA 636 (786)
Q Consensus 614 ~~NILld~~~~~kl~DfGl~~~~ 636 (786)
|+||+++ ++.+++.|||.+...
T Consensus 143 p~Nili~-~~~~~liDfg~a~~~ 164 (187)
T cd05119 143 EYNILVD-DGKVYIIDVPQAVEI 164 (187)
T ss_pred hhhEEEE-CCcEEEEECcccccc
Confidence 9999999 889999999997533
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.9e-14 Score=134.17 Aligned_cols=134 Identities=13% Similarity=0.134 Sum_probs=110.5
Q ss_pred cCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCC--CCcceeeeeeeeccccCCCCceEEEEE
Q 003926 482 SAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRH--RHLVSALGHCFECYFDDSSVSRIFLIF 559 (786)
Q Consensus 482 ~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H--~NIv~l~g~~~~~~~~~~~~~~~~LV~ 559 (786)
.+.||+|.++.||++...+ ..++||....... ...+.+|+.+++.++| .++.+++++... .+..+++|
T Consensus 3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~-------~~~~~~v~ 72 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGES-------DGWSYLLM 72 (155)
T ss_pred ceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCC-------CCccEEEE
Confidence 4679999999999999865 7899998865433 5679999999999987 488888776532 24589999
Q ss_pred ecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 560 EYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 560 Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
||++++++..+ ++.....++.+++++++++|.....+++|+|++++||++++...+++.|||.+..
T Consensus 73 e~~~g~~~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 73 EWIEGETLDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred EecCCeecccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 99998777543 5567778899999999999986555799999999999999989999999998754
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.6e-13 Score=140.07 Aligned_cols=139 Identities=16% Similarity=0.199 Sum_probs=105.5
Q ss_pred cCccC-CCCCceeEEEEecCCcEEEEEEecccCC-------------CChHHHHHHHHHHhcCCCCCc--ceeeeeeeec
Q 003926 482 SAFMG-EGSQGQMYRGRLKNGTFVAIRCLKMKKC-------------HSTRNFMHHIELISKLRHRHL--VSALGHCFEC 545 (786)
Q Consensus 482 ~~~iG-~G~fg~Vy~~~~~~g~~vAvK~l~~~~~-------------~~~~~f~~E~~~l~~l~H~NI--v~l~g~~~~~ 545 (786)
...|| .||.|+||+.... +..++||+...... .....+.+|++++.+++|++| +..++++...
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 46788 8999999999886 67889998854211 122457899999999999885 6667664431
Q ss_pred cccCCCCceEEEEEecCCC-CChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCc
Q 003926 546 YFDDSSVSRIFLIFEYVPN-GTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV 624 (786)
Q Consensus 546 ~~~~~~~~~~~LV~Ey~~~-GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~ 624 (786)
.......++||||+++ ++|.+++.+. .++.. .+.++++++.+||+. +|+||||||.|||++.++.
T Consensus 115 ---~~~~~~~~lV~e~l~G~~~L~~~l~~~----~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~ 180 (239)
T PRK01723 115 ---HGLFYRADILIERIEGARDLVALLQEA----PLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGK 180 (239)
T ss_pred ---cCcceeeeEEEEecCCCCCHHHHHhcC----CCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCC
Confidence 1111234699999997 6999988642 24432 356889999999998 9999999999999999889
Q ss_pred ccccCCCcccc
Q 003926 625 AKISSYNLPLL 635 (786)
Q Consensus 625 ~kl~DfGl~~~ 635 (786)
++|.|||.+..
T Consensus 181 v~LIDfg~~~~ 191 (239)
T PRK01723 181 FWLIDFDRGEL 191 (239)
T ss_pred EEEEECCCccc
Confidence 99999998643
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=9.1e-14 Score=161.37 Aligned_cols=110 Identities=25% Similarity=0.409 Sum_probs=100.6
Q ss_pred hhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcC
Q 003926 249 LVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSS 328 (786)
Q Consensus 249 L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~ 328 (786)
+..|+|++|.+.|.+|..+.++++|+.|+|++|+|.|.+|..++.+++|+.|+|++|+++|.+|..++.+++|+.|+|++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCccCChhhhcC-CCCcEEEcCCcccCCC
Q 003926 329 NLLTGQLPNCLLAG-SKNRVVLYARNCLAAG 358 (786)
Q Consensus 329 N~l~g~~p~~~~~~-~~~~~~~~~~N~l~~~ 358 (786)
|+++|.+|..+... ..+..+.+.+|...++
T Consensus 500 N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~ 530 (623)
T PLN03150 500 NSLSGRVPAALGGRLLHRASFNFTDNAGLCG 530 (623)
T ss_pred CcccccCChHHhhccccCceEEecCCccccC
Confidence 99999999988653 3456778888865543
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.45 E-value=5.5e-14 Score=140.61 Aligned_cols=206 Identities=18% Similarity=0.302 Sum_probs=137.5
Q ss_pred HhcCCCCCcceeeeeeeeccccCCCCceEEEEEecCCCCChhHHhhcCC-CCCCCCHHHHHHHHHHHHHHhhhhhcCCCC
Q 003926 527 ISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGH-AHQSLTWTQRISAAIGVAKGIQFLHTGIVP 605 (786)
Q Consensus 527 l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ 605 (786)
+-++-|.|||+++.|+.+..+.+ ..+..++.|||..|++..+|++-+ .+..+....-.+.+.||..||.|||+ |.|
T Consensus 121 llqlvHsnlvkfH~yw~d~K~~e--~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs-~~P 197 (458)
T KOG1266|consen 121 LLQLVHSNLVKFHKYWTDKKYEE--KPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS-CDP 197 (458)
T ss_pred HHHHHHHHHHHHHHhhccccccc--ccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-cCC
Confidence 44567999999998876543322 356789999999999999998532 22345555556788999999999998 789
Q ss_pred CccccCCCCCceeecCCCcccccCCCcccc---cc--cccccccccccccccCccccccCCCCcccceeehhHHHHHHHh
Q 003926 606 GVFSNNLKITDILLDQNLVAKISSYNLPLL---AE--NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV 680 (786)
Q Consensus 606 ~ivHrdlk~~NILld~~~~~kl~DfGl~~~---~~--~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt 680 (786)
+|+|+++..+-|.+..++-+|+.----... .. .........+..++.+||+-.....+..+|||+||+-.+||..
T Consensus 198 piihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemai 277 (458)
T KOG1266|consen 198 PIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAI 277 (458)
T ss_pred ccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHH
Confidence 999999999999999999888753211100 00 0000111234567888998777778889999999999999998
Q ss_pred CCCC-CCCchhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 681 GRPL-KSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 681 G~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
|.-- ............+..+....+ +-.+ .+.+..|++..|..||+|++.+.|+-
T Consensus 278 lEiq~tnseS~~~~ee~ia~~i~~le----n~lq---------------r~~i~kcl~~eP~~rp~ar~llfHpl 333 (458)
T KOG1266|consen 278 LEIQSTNSESKVEVEENIANVIIGLE----NGLQ---------------RGSITKCLEGEPNGRPDARLLLFHPL 333 (458)
T ss_pred heeccCCCcceeehhhhhhhheeecc----Cccc---------------cCcCcccccCCCCCCcchhhhhcCce
Confidence 8632 222211111111111111100 0011 13455799999999999999987663
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.39 E-value=6.8e-14 Score=160.01 Aligned_cols=256 Identities=16% Similarity=0.197 Sum_probs=180.2
Q ss_pred cCCCccCccCCCCCceeEEEEec--CCcEEEEEEecccC--CCChHHHHHHHHHHhcCC-CCCcceeeeeeeeccccCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK--NGTFVAIRCLKMKK--CHSTRNFMHHIELISKLR-HRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~--~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~-H~NIv~l~g~~~~~~~~~~~ 551 (786)
..|...+.||+|+|+.|-..... ....+|+|.+.... ....+....|..+-..+. |+|++.+++...+
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~------- 92 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSS------- 92 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCC-------
Confidence 34566677999999999887643 35567777776543 112233445777777776 9999999987654
Q ss_pred CceEEEEEecCCCCChhHHh-hcCCCCCCCCHHHHHHHHHHHHHHhhhhh-cCCCCCccccCCCCCceeecCCC-ccccc
Q 003926 552 VSRIFLIFEYVPNGTLRSWI-SEGHAHQSLTWTQRISAAIGVAKGIQFLH-TGIVPGVFSNNLKITDILLDQNL-VAKIS 628 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l-~~~~~~~~l~~~~~~~ia~~ia~gL~yLH-~~~~~~ivHrdlk~~NILld~~~-~~kl~ 628 (786)
.+..++++||..+|++.+.+ +... ...+....-.+..|...|+.|+| .. ++.|||+||+|.+++..+ ..|++
T Consensus 93 ~~~~~~~~~~s~g~~~f~~i~~~~~--~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~ 167 (601)
T KOG0590|consen 93 PRSYLLSLSYSDGGSLFSKISHPDS--TGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIA 167 (601)
T ss_pred CcccccccCcccccccccccccCCc--cCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCC
Confidence 45689999999999999988 4321 12344455667889999999999 65 999999999999999999 99999
Q ss_pred CCCccccccc-cc---ccccccc-cccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCchhHH--HHHHHHHH
Q 003926 629 SYNLPLLAEN-AE---KVGHVIP-YSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL--LKNQLQAV 700 (786)
Q Consensus 629 DfGl~~~~~~-~~---~~~~~~~-~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~--~~~~~~~~ 700 (786)
|||++..... .. ......+ +..|+|||...+. ......|+||.|+++.-+++|..|++...... ...|...
T Consensus 168 df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~- 246 (601)
T KOG0590|consen 168 DFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSN- 246 (601)
T ss_pred CchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeeccc-
Confidence 9999865443 11 2223456 7889999988763 44678899999999999999999876432211 0111000
Q ss_pred HHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 701 VTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 701 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
..... ...........+++..+++..+|+.|.+.+++-.+.|...
T Consensus 247 --------~~~~~----~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 247 --------KGRFT----QLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred --------ccccc----cCccccCChhhhhcccccccCCchhccccccccccccccc
Confidence 00000 0111122234456667888899999999999988887655
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.3e-14 Score=154.78 Aligned_cols=173 Identities=27% Similarity=0.433 Sum_probs=93.2
Q ss_pred CCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEE
Q 003926 130 LSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLA 209 (786)
Q Consensus 130 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 209 (786)
|+.-...||+.|++. .+|..+..+-.|+.|.|..|.+- .+|..+.++..|++|||+.|+++ .+|..+..|+ |+.|-
T Consensus 74 ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli 149 (722)
T KOG0532|consen 74 LTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLI 149 (722)
T ss_pred ccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEE
Confidence 334444455555544 44444444555555555555443 44445555555555555555554 3444444443 55555
Q ss_pred ccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCcc--ccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCC
Q 003926 210 LSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKV--GKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPF 287 (786)
Q Consensus 210 Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~--~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 287 (786)
+++|+++..+++++.+..|..||.+.|++....+.. +.+|+.|.+..|++. .+|.++..| .|..||+|.|+++ .+
T Consensus 150 ~sNNkl~~lp~~ig~~~tl~~ld~s~nei~slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis-~i 226 (722)
T KOG0532|consen 150 VSNNKLTSLPEEIGLLPTLAHLDVSKNEIQSLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKIS-YL 226 (722)
T ss_pred EecCccccCCcccccchhHHHhhhhhhhhhhchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCcee-ec
Confidence 555555444444444444555555555443333322 134444445555543 355566643 4777888888877 57
Q ss_pred chhhCCCCCCcEEEeecCCCCc
Q 003926 288 PQALLSLPSITYLNIADNKLTG 309 (786)
Q Consensus 288 p~~~~~l~~L~~L~l~~N~l~g 309 (786)
|-.|.+|..|++|.|.+|.|..
T Consensus 227 Pv~fr~m~~Lq~l~LenNPLqS 248 (722)
T KOG0532|consen 227 PVDFRKMRHLQVLQLENNPLQS 248 (722)
T ss_pred chhhhhhhhheeeeeccCCCCC
Confidence 7778888888888888887774
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.38 E-value=1e-12 Score=145.86 Aligned_cols=145 Identities=18% Similarity=0.192 Sum_probs=102.1
Q ss_pred CCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCC----------------------------------------h
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHS----------------------------------------T 517 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~----------------------------------------~ 517 (786)
.|+ .+.||.|++|.||+|++++|+.||||+.+...... .
T Consensus 119 ~fd-~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E 197 (437)
T TIGR01982 119 EFE-EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRE 197 (437)
T ss_pred hCC-CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHH
Confidence 344 36899999999999999999999999986431000 0
Q ss_pred HHHHHHHHHHhcC----CCCCcceeeeeeeeccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHH
Q 003926 518 RNFMHHIELISKL----RHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVA 593 (786)
Q Consensus 518 ~~f~~E~~~l~~l----~H~NIv~l~g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia 593 (786)
-+|.+|++.+.++ +|.+-|.+-..+.+. .+..+|||||+++++|.++...... .. .+..++..++
T Consensus 198 ldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~------~~~~vLvmE~i~G~~L~~~~~~~~~--~~---~~~~ia~~~~ 266 (437)
T TIGR01982 198 LDLRREAANASELGENFKNDPGVYVPEVYWDR------TSERVLTMEWIDGIPLSDIAALDEA--GL---DRKALAENLA 266 (437)
T ss_pred HCHHHHHHHHHHHHHhcCCCCCEEeCCEehhh------cCCceEEEEeECCcccccHHHHHhc--CC---CHHHHHHHHH
Confidence 0255666666655 344444444444321 2346899999999999987653211 12 2345666666
Q ss_pred H-HhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccc
Q 003926 594 K-GIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637 (786)
Q Consensus 594 ~-gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~ 637 (786)
+ .+..+|.. +++|+|++|.||+++.++.+++.|||++....
T Consensus 267 ~~~l~ql~~~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 267 RSFLNQVLRD---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred HHHHHHHHhC---CceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 5 46778876 99999999999999999999999999985543
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.34 E-value=7.7e-14 Score=148.89 Aligned_cols=181 Identities=27% Similarity=0.349 Sum_probs=155.7
Q ss_pred cCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEE
Q 003926 152 SILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVL 231 (786)
Q Consensus 152 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L 231 (786)
-.++--...||+.|++. .+|..+..+-.|+.+.|..|.+. .+|..+.+|..|++|||+.|+++-.++.+..|+ |+.|
T Consensus 72 ~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS~lp~~lC~lp-Lkvl 148 (722)
T KOG0532|consen 72 YDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLSHLPDGLCDLP-LKVL 148 (722)
T ss_pred ccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhhcCChhhhcCc-ceeE
Confidence 34555677899999998 89999999999999999999998 789999999999999999999997776666664 8999
Q ss_pred EcccCCCCCCCCccc--cchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCc
Q 003926 232 DLENNALGPQFPKVG--KKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTG 309 (786)
Q Consensus 232 ~L~~N~l~~~~p~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g 309 (786)
-+++|+++...+.+. ..|..||.+.|.+. .+|..++.+.+|+.|.+..|++. .+|+.+..| .|..||++.|+++
T Consensus 149 i~sNNkl~~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis- 224 (722)
T KOG0532|consen 149 IVSNNKLTSLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKIS- 224 (722)
T ss_pred EEecCccccCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCcee-
Confidence 999999987666653 67889999999996 57889999999999999999998 577778855 5899999999998
Q ss_pred ccCccCCCCCCCCEEeCcCCcCCccCChhhh
Q 003926 310 KLFDDLSCNPELGFVDLSSNLLTGQLPNCLL 340 (786)
Q Consensus 310 ~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~ 340 (786)
.+|-.|..+..|++|-|.+|.|. ..|..+.
T Consensus 225 ~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC 254 (722)
T KOG0532|consen 225 YLPVDFRKMRHLQVLQLENNPLQ-SPPAQIC 254 (722)
T ss_pred ecchhhhhhhhheeeeeccCCCC-CChHHHH
Confidence 68889999999999999999998 4555443
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.27 E-value=7.2e-12 Score=139.08 Aligned_cols=198 Identities=30% Similarity=0.405 Sum_probs=132.1
Q ss_pred EEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCC-CCCEEEccCCcCcccCCccccCCCCCCEEEccCC
Q 003926 135 ILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLP-ILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNN 213 (786)
Q Consensus 135 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 213 (786)
.|+++.|.+...+ ..+..++.+..|++.+|.++ .+|.....+. +|+.|++++|++. .+|..++.+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~~~-~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRSNI-SELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccccCc-hhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 4566666553222 23344466666666666665 4555555553 6666666666665 34455666677777777777
Q ss_pred cCCcCCCCCCCCCcCCEEEcccCCCCCCCCc--cccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhh
Q 003926 214 HFYGEVPDFSGLTYLQVLDLENNALGPQFPK--VGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQAL 291 (786)
Q Consensus 214 ~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~--~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 291 (786)
+++...+..+.+++|+.|++++|++....+. ....|..+.+++|.+ -.++..+.++.++..|.+.+|++.. ++..+
T Consensus 174 ~l~~l~~~~~~~~~L~~L~ls~N~i~~l~~~~~~~~~L~~l~~~~N~~-~~~~~~~~~~~~l~~l~l~~n~~~~-~~~~~ 251 (394)
T COG4886 174 DLSDLPKLLSNLSNLNNLDLSGNKISDLPPEIELLSALEELDLSNNSI-IELLSSLSNLKNLSGLELSNNKLED-LPESI 251 (394)
T ss_pred hhhhhhhhhhhhhhhhheeccCCccccCchhhhhhhhhhhhhhcCCcc-eecchhhhhcccccccccCCceeee-ccchh
Confidence 7665444444666677777777776554443 234477777777753 2456677888888888888888873 47778
Q ss_pred CCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhh
Q 003926 292 LSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCL 339 (786)
Q Consensus 292 ~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~ 339 (786)
..+++|++|++++|.++.... +..+.+++.|++++|.++..+|...
T Consensus 252 ~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~~~ 297 (394)
T COG4886 252 GNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPLIA 297 (394)
T ss_pred ccccccceecccccccccccc--ccccCccCEEeccCccccccchhhh
Confidence 888889999999998886544 7788888999999998887666543
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.22 E-value=7.3e-12 Score=139.00 Aligned_cols=199 Identities=31% Similarity=0.391 Sum_probs=156.3
Q ss_pred EEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCC-CCcEEEcccccCCCCCCcccCCCCCCCEEEccCC
Q 003926 111 VLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILT-SLQTLILDENMLAGRVPDWLGSLPILAVLSLRNN 189 (786)
Q Consensus 111 ~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 189 (786)
.|++..|.+...+. .+..++.++.|++.+|.++ .+|.....+. +|+.|++++|++. .+|..++.+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~~~~-~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRSNIS-ELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccccCch-hhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 57888887755433 4556688999999999998 5666677774 9999999999987 66678889999999999999
Q ss_pred cCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCc--cccchhhhhccCCccCCcChhhh
Q 003926 190 MFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPK--VGKKLVTMILSKNKFRSAIPAEV 267 (786)
Q Consensus 190 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~--~~~~L~~L~ls~N~l~~~~p~~~ 267 (786)
+++ .+|...+.+++|+.|++++|+++...+....+..|++|.+++|.+...+.. ...++..+.+.+|++.. ++..+
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~~l~~~~~~~~~L~~l~~~~N~~~~~~~~~~~~~~l~~l~l~~n~~~~-~~~~~ 251 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKISDLPPEIELLSALEELDLSNNSIIELLSSLSNLKNLSGLELSNNKLED-LPESI 251 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccccCchhhhhhhhhhhhhhcCCcceecchhhhhcccccccccCCceeee-ccchh
Confidence 998 466666688899999999999986555455666799999999954333322 24567777788888854 47788
Q ss_pred cCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCC
Q 003926 268 SSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLS 316 (786)
Q Consensus 268 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~ 316 (786)
+.+++++.|++++|.++.. +. ++.+.+|+.|++++|.++...+....
T Consensus 252 ~~l~~l~~L~~s~n~i~~i-~~-~~~~~~l~~L~~s~n~~~~~~~~~~~ 298 (394)
T COG4886 252 GNLSNLETLDLSNNQISSI-SS-LGSLTNLRELDLSGNSLSNALPLIAL 298 (394)
T ss_pred ccccccceecccccccccc-cc-ccccCccCEEeccCccccccchhhhc
Confidence 8999999999999999854 44 99999999999999999987776543
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.17 E-value=6e-11 Score=133.18 Aligned_cols=144 Identities=14% Similarity=0.161 Sum_probs=93.4
Q ss_pred hcCCCccCccCCCCCceeEEEEecC-CcEEEEEEecccCCC--------------------------C--------h---
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLKN-GTFVAIRCLKMKKCH--------------------------S--------T--- 517 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~--------------------------~--------~--- 517 (786)
-.+|+. +.||.|++|.||+|++++ |+.||||+.+..... . .
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 345776 789999999999999887 999999999743100 0 0
Q ss_pred ---HHHHHHHHHHhcCC----CCCcceeeeeeeeccccCCCCceEEEEEecCCCCChhHH--hhcCCCCCCCCHHHHHHH
Q 003926 518 ---RNFMHHIELISKLR----HRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSW--ISEGHAHQSLTWTQRISA 588 (786)
Q Consensus 518 ---~~f~~E~~~l~~l~----H~NIv~l~g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~--l~~~~~~~~l~~~~~~~i 588 (786)
-+|.+|+..+.+++ +.+.|.+-.++++. ....+|||||++|+++.++ +... ..+.. .+
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~------st~~VLvmE~i~G~~l~d~~~l~~~----g~d~~---~l 264 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDY------CSETVMVMERMYGIPVSDVAALRAA----GTDMK---LL 264 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeeccc------CCCceEEEeeecCccHHhHHHHHhc----CCCHH---HH
Confidence 12455665555553 44545544444321 2346899999999999874 2221 12211 12
Q ss_pred HHHHHHH-hhhhhcCCCCCccccCCCCCceeecCCC----cccccCCCccccc
Q 003926 589 AIGVAKG-IQFLHTGIVPGVFSNNLKITDILLDQNL----VAKISSYNLPLLA 636 (786)
Q Consensus 589 a~~ia~g-L~yLH~~~~~~ivHrdlk~~NILld~~~----~~kl~DfGl~~~~ 636 (786)
+...++. +.-++.+ +++|+|+||.||+++.++ .+++.|||+....
T Consensus 265 a~~~v~~~~~Qif~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l 314 (537)
T PRK04750 265 AERGVEVFFTQVFRD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSL 314 (537)
T ss_pred HHHHHHHHHHHHHhC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEEC
Confidence 2111111 1112334 999999999999999888 8999999997544
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.6e-10 Score=111.93 Aligned_cols=130 Identities=15% Similarity=0.024 Sum_probs=94.7
Q ss_pred cCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcce-eeeeeeeccccCCCCceEEEEEe
Q 003926 482 SAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVS-ALGHCFECYFDDSSVSRIFLIFE 560 (786)
Q Consensus 482 ~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~-l~g~~~~~~~~~~~~~~~~LV~E 560 (786)
.+.++.|.++.||+++.. |..|++|....... ....+.+|+++++.+.+.++++ ++++. ....++|||
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~---------~~~~~lv~e 71 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD---------PETGVLITE 71 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe---------CCCCeEEEE
Confidence 356899999999999876 67899998754431 2345688999999987666554 33321 122479999
Q ss_pred cCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCC--CCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 561 YVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI--VPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 561 y~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~--~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
|+++.++.+. . . ....++.+++++++.||... ...++|+|+++.||+++ +..+++.|||.+.
T Consensus 72 ~i~G~~l~~~--~------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 72 FIEGSELLTE--D------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred ecCCCccccc--c------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 9999887543 0 0 11235678999999999862 22469999999999999 5678999999753
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.6e-10 Score=126.46 Aligned_cols=251 Identities=16% Similarity=0.168 Sum_probs=169.0
Q ss_pred HHHhcCCCccCccCCCCCceeEEEEe--cCCcEEEEEEecccCCCChHH--HHHHHHHHhcC-CCCCcceeeeeeeeccc
Q 003926 473 EEATNNFDTSAFMGEGSQGQMYRGRL--KNGTFVAIRCLKMKKCHSTRN--FMHHIELISKL-RHRHLVSALGHCFECYF 547 (786)
Q Consensus 473 ~~~~~~f~~~~~iG~G~fg~Vy~~~~--~~g~~vAvK~l~~~~~~~~~~--f~~E~~~l~~l-~H~NIv~l~g~~~~~~~ 547 (786)
...+.+|.....||.|.|+.||+... .++..+++|.+.........+ -+.|+.+...+ -|.+++.+...+.+
T Consensus 261 s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~--- 337 (524)
T KOG0601|consen 261 SCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQ--- 337 (524)
T ss_pred eeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccc---
Confidence 34566788899999999999999874 368899999887654433322 14555555555 47777776554432
Q ss_pred cCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCC-Cccc
Q 003926 548 DDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN-LVAK 626 (786)
Q Consensus 548 ~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~-~~~k 626 (786)
.+..|+=-|||+++++...+.- ...++...++++..+++.++.++|+. .++|+|+||+||++..+ +..+
T Consensus 338 ----~r~~~ip~e~~~~~s~~l~~~~---~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~ 407 (524)
T KOG0601|consen 338 ----LRQGYIPLEFCEGGSSSLRSVT---SQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSK 407 (524)
T ss_pred ----cccccCchhhhcCcchhhhhHH---HHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhh
Confidence 3456789999999998876521 23577778889999999999999986 99999999999999886 8889
Q ss_pred ccCCCccccccccccccccccc-ccc-cCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhc
Q 003926 627 ISSYNLPLLAENAEKVGHVIPY-SGS-IDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704 (786)
Q Consensus 627 l~DfGl~~~~~~~~~~~~~~~~-~~~-~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 704 (786)
+.|||......... ...... ..| .++.......+-.+.|+||||..+.|.++|.+....... +.
T Consensus 408 ~~~~~~~t~~~~~~--~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~-----~~------- 473 (524)
T KOG0601|consen 408 LGDFGCWTRLAFSS--GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ-----SL------- 473 (524)
T ss_pred ccccccccccceec--ccccccccccccchhhccccccccccccccccccccccccCcccCccccc-----ce-------
Confidence 99999874321111 111111 222 244444445577899999999999999999765432110 00
Q ss_pred cccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 705 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.++.-.-+.... .. ..+..++......++..||.+.+...+..+..
T Consensus 474 --~i~~~~~p~~~~--~~---~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~ 519 (524)
T KOG0601|consen 474 --TIRSGDTPNLPG--LK---LQLQVLLKVMINPDRKRRPSAVELSLHSEFYR 519 (524)
T ss_pred --eeecccccCCCc--hH---HhhhhhhhhhcCCccccchhhhhhcccchhhh
Confidence 000000111111 11 23344555677899999999999888877654
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.05 E-value=3.3e-10 Score=123.99 Aligned_cols=247 Identities=17% Similarity=0.158 Sum_probs=164.6
Q ss_pred CCccCccCC--CCCceeEEEEe---cCCcEEEEEEecccCC--CChHHHHHHHHHHhcCC-CCCcceeeeeeeeccccCC
Q 003926 479 FDTSAFMGE--GSQGQMYRGRL---KNGTFVAIRCLKMKKC--HSTRNFMHHIELISKLR-HRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 479 f~~~~~iG~--G~fg~Vy~~~~---~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~-H~NIv~l~g~~~~~~~~~~ 550 (786)
|.....+|. |.+|.||.+.. .++..+|+|+-+.... .....=.+|+....+++ |+|.|+....+..
T Consensus 116 ~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~------ 189 (524)
T KOG0601|consen 116 FPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEG------ 189 (524)
T ss_pred cccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCccccc------
Confidence 455678999 99999999986 3688999997443322 22233356777777774 9999996655443
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHH----HhhhhhcCCCCCccccCCCCCceeecCC-Ccc
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAK----GIQFLHTGIVPGVFSNNLKITDILLDQN-LVA 625 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~----gL~yLH~~~~~~ivHrdlk~~NILld~~-~~~ 625 (786)
.+..++=.|+|. .+|..+.+... ..++......+..+... |+.++|.+ .++|-|+|+.||.+..+ ...
T Consensus 190 -~~~lfiqtE~~~-~sl~~~~~~~~--~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~ 262 (524)
T KOG0601|consen 190 -SGILFIQTELCG-ESLQSYCHTPC--NFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSC 262 (524)
T ss_pred -CCcceeeecccc-chhHHhhhccc--ccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheeccccccee
Confidence 456788889886 68888877532 22444555566666666 99999998 99999999999999999 889
Q ss_pred cccCCCccccccccccc------ccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHH
Q 003926 626 KISSYNLPLLAENAEKV------GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQA 699 (786)
Q Consensus 626 kl~DfGl~~~~~~~~~~------~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~ 699 (786)
+++|||+........-. ....+-..|++||.. .+.++.+.||||+|.+.+|-.+|...+......
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~-~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~-------- 333 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELL-NGLATFASDIFSLGEVILEAILGSHLPSVGKNS-------- 333 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhh-ccccchHhhhcchhhhhHhhHhhcccccCCCCC--------
Confidence 99999997554332211 111345678999975 456889999999999999999986544321000
Q ss_pred HHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 700 VVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 700 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
.+...+.+..+. +.......++-..+..+++.+|-.|++.+++..+..
T Consensus 334 ----~W~~~r~~~ip~---e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~ 381 (524)
T KOG0601|consen 334 ----SWSQLRQGYIPL---EFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNV 381 (524)
T ss_pred ----CccccccccCch---hhhcCcchhhhhHHHHhcCcchhhhhHHHHHhcccc
Confidence 000111111110 000001112223566788999999999988775543
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.4e-10 Score=110.84 Aligned_cols=126 Identities=29% Similarity=0.346 Sum_probs=50.0
Q ss_pred cCCCCCCCEEEccCCCCccCCCccCC-CCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCccc-CCCCC
Q 003926 103 LVKLPDLKVLRLVSLGLWGPLSGKIS-RLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWL-GSLPI 180 (786)
Q Consensus 103 l~~l~~L~~L~L~~n~l~g~~~~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~ 180 (786)
+.+..+++.|+|.+|.++.+ +.++ .+++|+.||||+|.|+.. + .+..++.|++|++++|+++. +++.+ ..+++
T Consensus 15 ~~n~~~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~l-~-~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~ 89 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITKL-E-GLPGLPRLKTLDLSNNRISS-ISEGLDKNLPN 89 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S--CHHHHHH-TT
T ss_pred cccccccccccccccccccc--cchhhhhcCCCEEECCCCCCccc-c-CccChhhhhhcccCCCCCCc-cccchHHhCCc
Confidence 44666789999999999764 2455 588999999999999854 3 47789999999999999984 44444 46899
Q ss_pred CCEEEccCCcCcccCC-ccccCCCCCCEEEccCCcCCcCCCC-----CCCCCcCCEEEcc
Q 003926 181 LAVLSLRNNMFNGTLP-DSFSYLENLRVLALSNNHFYGEVPD-----FSGLTYLQVLDLE 234 (786)
Q Consensus 181 L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~-----~~~l~~L~~L~L~ 234 (786)
|+.|+|++|++...-- ..+..+++|+.|+|.+|.++.. +. +..+++|+.||-.
T Consensus 90 L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~-~~YR~~vi~~lP~Lk~LD~~ 148 (175)
T PF14580_consen 90 LQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEK-KNYRLFVIYKLPSLKVLDGQ 148 (175)
T ss_dssp --EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGS-TTHHHHHHHH-TT-SEETTE
T ss_pred CCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccch-hhHHHHHHHHcChhheeCCE
Confidence 9999999999874211 3467788999999999988754 33 5667888888753
|
|
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.2e-10 Score=121.36 Aligned_cols=179 Identities=24% Similarity=0.297 Sum_probs=98.9
Q ss_pred cCCCCCcEEEcccccCCCCCC--cccCCCCCCCEEEccCCcCcccCC--ccccCCCCCCEEEccCCcCCcCCCC--CCCC
Q 003926 152 SILTSLQTLILDENMLAGRVP--DWLGSLPILAVLSLRNNMFNGTLP--DSFSYLENLRVLALSNNHFYGEVPD--FSGL 225 (786)
Q Consensus 152 ~~l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~l 225 (786)
+++.+|+.+.|.+.... ..+ .....|++++.||||.|-|..-.| .....|++|+.|+|+.|.+.-...+ -..+
T Consensus 118 sn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l 196 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLL 196 (505)
T ss_pred hhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhh
Confidence 34444555554444432 111 233445555555555555442211 2234455566666666655433222 2245
Q ss_pred CcCCEEEcccCCCCCC----CCccccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCc--hhhCCCCCCcE
Q 003926 226 TYLQVLDLENNALGPQ----FPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFP--QALLSLPSITY 299 (786)
Q Consensus 226 ~~L~~L~L~~N~l~~~----~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~ 299 (786)
++|+.|.|+.|.|+-. +-..+++|..|+|..|...+.--.....+..|+.|||++|++.. .+ ...+.++.|+.
T Consensus 197 ~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~-~~~~~~~~~l~~L~~ 275 (505)
T KOG3207|consen 197 SHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLID-FDQGYKVGTLPGLNQ 275 (505)
T ss_pred hhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccc-cccccccccccchhh
Confidence 5666777777766521 11124567777777774333333334456677888888877763 33 45677788888
Q ss_pred EEeecCCCCcccCcc------CCCCCCCCEEeCcCCcCC
Q 003926 300 LNIADNKLTGKLFDD------LSCNPELGFVDLSSNLLT 332 (786)
Q Consensus 300 L~l~~N~l~g~~~~~------~~~~~~L~~l~ls~N~l~ 332 (786)
|+++.+.++..-... ...+++|++|++..|++.
T Consensus 276 Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~ 314 (505)
T KOG3207|consen 276 LNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIR 314 (505)
T ss_pred hhccccCcchhcCCCccchhhhcccccceeeecccCccc
Confidence 888888776532222 356778888888888874
|
|
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.95 E-value=1e-10 Score=121.95 Aligned_cols=209 Identities=24% Similarity=0.218 Sum_probs=126.8
Q ss_pred CCCCCCCEEEccCCCCccCCC-ccCCCCCCCCEEeccCCCCCCCCC--ccccCCCCCcEEEcccccCCCCCCc-ccCCCC
Q 003926 104 VKLPDLKVLRLVSLGLWGPLS-GKISRLSSLEILNMSSNFLNGAIP--QELSILTSLQTLILDENMLAGRVPD-WLGSLP 179 (786)
Q Consensus 104 ~~l~~L~~L~L~~n~l~g~~~-~~~~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~ 179 (786)
.++.+|+...|.+....-..- +....|++++.||||.|-|....| .-...|++|+.|+|+.|++.-...+ .-..++
T Consensus 118 sn~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~ 197 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLS 197 (505)
T ss_pred hhHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhh
Confidence 478888888888776543221 356678999999999998874332 3346789999999999988643332 223677
Q ss_pred CCCEEEccCCcCcccCC-ccccCCCCCCEEEccCCc-CCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCC
Q 003926 180 ILAVLSLRNNMFNGTLP-DSFSYLENLRVLALSNNH-FYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKN 257 (786)
Q Consensus 180 ~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N 257 (786)
.|+.|.|+.|.|+..-- .....+++|+.|+|..|. +....-....+..|+.|||++|++-...
T Consensus 198 ~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~--------------- 262 (505)
T KOG3207|consen 198 HLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFD--------------- 262 (505)
T ss_pred hhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccc---------------
Confidence 89999999998873211 224467889999999985 2222223556678888888888773211
Q ss_pred ccCCcChhhhcCccccceeeccCccccCC-Cchh-----hCCCCCCcEEEeecCCCCcc-cCccCCCCCCCCEEeCcCCc
Q 003926 258 KFRSAIPAEVSSYYQLQRLDLSSNRFVGP-FPQA-----LLSLPSITYLNIADNKLTGK-LFDDLSCNPELGFVDLSSNL 330 (786)
Q Consensus 258 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~-----~~~l~~L~~L~l~~N~l~g~-~~~~~~~~~~L~~l~ls~N~ 330 (786)
++ ...+.++.|+.|+++.+.+... +|+. ...+++|++|+++.|++... ....+..+++|+.|....|.
T Consensus 263 ~~-----~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ 337 (505)
T KOG3207|consen 263 QG-----YKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNY 337 (505)
T ss_pred cc-----cccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhccccc
Confidence 00 1123344444444444444321 1221 23455666666666666421 11233344556666666666
Q ss_pred CC
Q 003926 331 LT 332 (786)
Q Consensus 331 l~ 332 (786)
|+
T Consensus 338 ln 339 (505)
T KOG3207|consen 338 LN 339 (505)
T ss_pred cc
Confidence 65
|
|
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.95 E-value=9.7e-11 Score=130.36 Aligned_cols=127 Identities=31% Similarity=0.371 Sum_probs=56.1
Q ss_pred CCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEE
Q 003926 106 LPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLS 185 (786)
Q Consensus 106 l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 185 (786)
+..++.+++..|.+.- +-..+..+++|+.|++..|+|... ...+..+++|++|+|++|.|+...+ +..++.|+.|+
T Consensus 71 l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~L~ 146 (414)
T KOG0531|consen 71 LTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKLEG--LSTLTLLKELN 146 (414)
T ss_pred hHhHHhhccchhhhhh-hhcccccccceeeeeccccchhhc-ccchhhhhcchheeccccccccccc--hhhccchhhhe
Confidence 3444444455544433 222344455555555555555432 2124445555555555555543221 33344455555
Q ss_pred ccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCCCcCCEEEcccCCC
Q 003926 186 LRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNAL 238 (786)
Q Consensus 186 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l 238 (786)
+++|.++.. ..+..+++|+.+++++|.++..-+. ...+.+|+.+++.+|.+
T Consensus 147 l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~~~~~~~l~~l~l~~n~i 198 (414)
T KOG0531|consen 147 LSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDELSELISLEELDLGGNSI 198 (414)
T ss_pred eccCcchhc--cCCccchhhhcccCCcchhhhhhhhhhhhccchHHHhccCCch
Confidence 555554421 1233344455555555544432221 24444444444444444
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=98.94 E-value=4.7e-09 Score=106.40 Aligned_cols=145 Identities=17% Similarity=0.242 Sum_probs=108.4
Q ss_pred CccCCCCCceeEEEEecCCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCC--CcceeeeeeeeccccCCCCceEEEEE
Q 003926 483 AFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHR--HLVSALGHCFECYFDDSSVSRIFLIF 559 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~--NIv~l~g~~~~~~~~~~~~~~~~LV~ 559 (786)
+.||.|.++.||++...+|..+++|....... .....+.+|+++++.+++. ++.++++++.... ..+..++||
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~----~~~~~~~v~ 79 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPS----VLGTPFYVM 79 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCC----ccCCceEEE
Confidence 56899999999999987778999998765432 1345789999999999764 4566666554311 012468999
Q ss_pred ecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCC------------------------------------
Q 003926 560 EYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI------------------------------------ 603 (786)
Q Consensus 560 Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~------------------------------------ 603 (786)
||++++++.+.+.. ..++..++..++.++++.|.+||+..
T Consensus 80 e~i~G~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (223)
T cd05154 80 ERVDGRVLRDRLLR----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPP 155 (223)
T ss_pred EEeCCEecCCCCCC----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccH
Confidence 99999888775531 24677778888888888888888521
Q ss_pred -----------------CCCccccCCCCCceeecC--CCcccccCCCcccc
Q 003926 604 -----------------VPGVFSNNLKITDILLDQ--NLVAKISSYNLPLL 635 (786)
Q Consensus 604 -----------------~~~ivHrdlk~~NILld~--~~~~kl~DfGl~~~ 635 (786)
...++|+|+.+.||+++. +..+.+.||+.+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 156 AMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 245799999999999998 56678999987643
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=98.93 E-value=7.6e-09 Score=101.04 Aligned_cols=135 Identities=9% Similarity=0.101 Sum_probs=94.4
Q ss_pred CccCCCCCceeEEEEecC-------CcEEEEEEecccCC----------------------CChHHHH----HHHHHHhc
Q 003926 483 AFMGEGSQGQMYRGRLKN-------GTFVAIRCLKMKKC----------------------HSTRNFM----HHIELISK 529 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~~-------g~~vAvK~l~~~~~----------------------~~~~~f~----~E~~~l~~ 529 (786)
..||.|.-+.||.|.-.+ +..+|||..+.... ...+.+. +|.+.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 578999999999998543 47999998763210 0011233 79999998
Q ss_pred CCC--CCcceeeeeeeeccccCCCCceEEEEEecCCCCChhH-HhhcCCCCCCCCHHHHHHHHHHHHHHhhhh-hcCCCC
Q 003926 530 LRH--RHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRS-WISEGHAHQSLTWTQRISAAIGVAKGIQFL-HTGIVP 605 (786)
Q Consensus 530 l~H--~NIv~l~g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~-~l~~~~~~~~l~~~~~~~ia~~ia~gL~yL-H~~~~~ 605 (786)
++. -++-+.+++ ..-+|||||+.++.+.. .+.+ ..++..+...+..+++.+|.+| |..
T Consensus 83 l~~~Gv~vP~pi~~-----------~~~~lvME~Ig~~~~~~~~Lkd----~~~~~~~~~~i~~~i~~~l~~l~H~~--- 144 (197)
T cd05146 83 MQKAGIPCPEVVVL-----------KKHVLVMSFIGDDQVPAPKLKD----AKLNDEEMKNAYYQVLSMMKQLYKEC--- 144 (197)
T ss_pred HHHcCCCCCeEEEe-----------cCCEEEEEEcCCCCccchhhhc----cccCHHHHHHHHHHHHHHHHHHHHhC---
Confidence 853 345555543 12489999998754432 2322 1234445566778999999999 776
Q ss_pred CccccCCCCCceeecCCCcccccCCCccccc
Q 003926 606 GVFSNNLKITDILLDQNLVAKISSYNLPLLA 636 (786)
Q Consensus 606 ~ivHrdlk~~NILld~~~~~kl~DfGl~~~~ 636 (786)
++||+|+++.||++++ +.+.+.|||.+...
T Consensus 145 glVHGDLs~~NIL~~~-~~v~iIDF~qav~~ 174 (197)
T cd05146 145 NLVHADLSEYNMLWHD-GKVWFIDVSQSVEP 174 (197)
T ss_pred CeecCCCCHHHEEEEC-CcEEEEECCCceeC
Confidence 9999999999999974 57899999987543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.90 E-value=4.2e-10 Score=125.28 Aligned_cols=197 Identities=30% Similarity=0.307 Sum_probs=143.1
Q ss_pred ccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCC
Q 003926 102 TLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPIL 181 (786)
Q Consensus 102 ~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 181 (786)
.+..+.+|+.|+|.+|++..... .+..+++|++|+|++|.|+...+ +..++.|+.|++++|.++.. ..+..+++|
T Consensus 90 ~l~~~~~l~~l~l~~n~i~~i~~-~l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~L~l~~N~i~~~--~~~~~l~~L 164 (414)
T KOG0531|consen 90 HLSKLKSLEALDLYDNKIEKIEN-LLSSLVNLQVLDLSFNKITKLEG--LSTLTLLKELNLSGNLISDI--SGLESLKSL 164 (414)
T ss_pred ccccccceeeeeccccchhhccc-chhhhhcchheeccccccccccc--hhhccchhhheeccCcchhc--cCCccchhh
Confidence 47789999999999999987643 27889999999999999986644 67788899999999999732 356669999
Q ss_pred CEEEccCCcCcccCC-ccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCcc-cc--chhhhhccCC
Q 003926 182 AVLSLRNNMFNGTLP-DSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKV-GK--KLVTMILSKN 257 (786)
Q Consensus 182 ~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~-~~--~L~~L~ls~N 257 (786)
+.+++++|.+...-+ . ...+.+|+.+++.+|.+.. +..+..+..+..+++..|.++..-+.. .. .|+.+++++|
T Consensus 165 ~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~-i~~~~~~~~l~~~~l~~n~i~~~~~l~~~~~~~L~~l~l~~n 242 (414)
T KOG0531|consen 165 KLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIRE-IEGLDLLKKLVLLSLLDNKISKLEGLNELVMLHLRELYLSGN 242 (414)
T ss_pred hcccCCcchhhhhhhhh-hhhccchHHHhccCCchhc-ccchHHHHHHHHhhcccccceeccCcccchhHHHHHHhcccC
Confidence 999999999986544 2 5788999999999998863 333444555666688888876433322 12 2778888888
Q ss_pred ccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCC
Q 003926 258 KFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLT 308 (786)
Q Consensus 258 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 308 (786)
.+.. ++..+..+..+..|++++|++... ..+.....+..+.+..|.+.
T Consensus 243 ~i~~-~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~ 290 (414)
T KOG0531|consen 243 RISR-SPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLA 290 (414)
T ss_pred cccc-ccccccccccccccchhhcccccc--ccccccchHHHhccCcchhc
Confidence 7753 334556667777777777777643 12334455555666666554
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.90 E-value=2.3e-10 Score=113.36 Aligned_cols=135 Identities=25% Similarity=0.310 Sum_probs=80.4
Q ss_pred ccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhh
Q 003926 174 WLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMI 253 (786)
Q Consensus 174 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ 253 (786)
.+.....|+.||||+|.|+ .+-++..-++.++.|++|+|.+.. +..+..|.+|+.||||+|.++.
T Consensus 279 ~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~-v~nLa~L~~L~~LDLS~N~Ls~------------- 343 (490)
T KOG1259|consen 279 SADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRT-VQNLAELPQLQLLDLSGNLLAE------------- 343 (490)
T ss_pred ecchHhhhhhccccccchh-hhhhhhhhccceeEEeccccceee-ehhhhhcccceEeecccchhHh-------------
Confidence 3334455677777777766 355566666777777777776652 3335566666666666665531
Q ss_pred ccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCccc-CccCCCCCCCCEEeCcCCcCC
Q 003926 254 LSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKL-FDDLSCNPELGFVDLSSNLLT 332 (786)
Q Consensus 254 ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~-~~~~~~~~~L~~l~ls~N~l~ 332 (786)
+..+-..+-+.+.|.|+.|.|.. -+.++++-+|..||+++|++.... -..++++|.|+.+.|.+|.+.
T Consensus 344 ---------~~Gwh~KLGNIKtL~La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~ 412 (490)
T KOG1259|consen 344 ---------CVGWHLKLGNIKTLKLAQNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLA 412 (490)
T ss_pred ---------hhhhHhhhcCEeeeehhhhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcc
Confidence 22233334455566666666542 133555666666666666665321 245677778888888888877
Q ss_pred cc
Q 003926 333 GQ 334 (786)
Q Consensus 333 g~ 334 (786)
+.
T Consensus 413 ~~ 414 (490)
T KOG1259|consen 413 GS 414 (490)
T ss_pred cc
Confidence 53
|
|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.89 E-value=6.9e-09 Score=114.63 Aligned_cols=171 Identities=17% Similarity=0.220 Sum_probs=120.8
Q ss_pred eE-EEE-ecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEEEEecCCCCChhHH
Q 003926 493 MY-RGR-LKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSW 570 (786)
Q Consensus 493 Vy-~~~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~ 570 (786)
+| .|. ..++.+|.|...+...........+-++.|+.+|||||++++....+ .+..|||+|-+. .|..+
T Consensus 27 ~~~~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~-------~~~~ylvTErV~--Pl~~~ 97 (690)
T KOG1243|consen 27 LWPDGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEE-------EGTLYLVTERVR--PLETV 97 (690)
T ss_pred cccccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcc-------cCceEEEeeccc--cHHHH
Confidence 44 344 45788999998876654334456778889999999999999986654 346899999885 67777
Q ss_pred hhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccccccccc-ccccccc
Q 003926 571 ISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKV-GHVIPYS 649 (786)
Q Consensus 571 l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~~~-~~~~~~~ 649 (786)
+.+. .-....-.+.||+.||.|||++| +++|++|.-..|++++.|+-||++|.+....+..... .......
T Consensus 98 lk~l------~~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~ 169 (690)
T KOG1243|consen 98 LKEL------GKEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIE 169 (690)
T ss_pred HHHh------HHHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhh
Confidence 7652 23334446779999999999875 8999999999999999999999999886433221110 0000111
Q ss_pred cccCccccccCCCCcccceeehhHHHHHHHhCC
Q 003926 650 GSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR 682 (786)
Q Consensus 650 ~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~ 682 (786)
.+..|+...... ...|.|-||++++|++.|.
T Consensus 170 s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 170 SFDDPEEIDPSE--WSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred cccChhhcCccc--cchhhhhHHHHHHHHhCcc
Confidence 233444332111 3469999999999999993
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.88 E-value=2e-10 Score=113.85 Aligned_cols=137 Identities=25% Similarity=0.306 Sum_probs=106.3
Q ss_pred ccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcC
Q 003926 149 QELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYL 228 (786)
Q Consensus 149 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L 228 (786)
..+..-+.|+.||||+|.++ .+.++..-+|.++.|++|+|.+... +.+..|++|+.||||+|.++....--..|.++
T Consensus 278 ~~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls~~~Gwh~KLGNI 354 (490)
T KOG1259|consen 278 VSADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLAECVGWHLKLGNI 354 (490)
T ss_pred EecchHhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhHhhhhhHhhhcCE
Confidence 33445567999999999998 7788888999999999999999743 34888999999999999987544323345677
Q ss_pred CEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhhcCccccceeeccCccccCC-CchhhCCCCCCcEEEeecCCC
Q 003926 229 QVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGP-FPQALLSLPSITYLNIADNKL 307 (786)
Q Consensus 229 ~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~l~~N~l 307 (786)
+.|.|++|.+. .-+.+..+.+|..||+++|+|... --..++++|-|+.|.|-+|.+
T Consensus 355 KtL~La~N~iE-----------------------~LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl 411 (490)
T KOG1259|consen 355 KTLKLAQNKIE-----------------------TLSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPL 411 (490)
T ss_pred eeeehhhhhHh-----------------------hhhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCc
Confidence 77888777653 112366778899999999998742 224689999999999999999
Q ss_pred Cccc
Q 003926 308 TGKL 311 (786)
Q Consensus 308 ~g~~ 311 (786)
.+.+
T Consensus 412 ~~~v 415 (490)
T KOG1259|consen 412 AGSV 415 (490)
T ss_pred cccc
Confidence 8654
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.84 E-value=8.4e-10 Score=126.64 Aligned_cols=255 Identities=14% Similarity=0.172 Sum_probs=159.6
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
.++|.+.+-+-.|.++.++-+.-. .|...++|....... ...+...++-.++-..+||-++...-- ...
T Consensus 803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s-------~~~ 875 (1205)
T KOG0606|consen 803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPS-------FPC 875 (1205)
T ss_pred CccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCC-------CCC
Confidence 455666677888999999887632 354555554432211 111222222222222344555543221 123
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
....+||++|..+|+|...++... ..+..-.......+..+++|||.. .++|||+||.|++...++..+++|||
T Consensus 876 rsP~~L~~~~~~~~~~~Skl~~~~---~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~ 949 (1205)
T KOG0606|consen 876 RSPLPLVGHYLNGGDLPSKLHNSG---CLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFG 949 (1205)
T ss_pred CCCcchhhHHhccCCchhhhhcCC---CcccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCccc
Confidence 466899999999999999998643 222222222344567889999986 58999999999999999999999998
Q ss_pred cccccc------cc--------------------------cccccccccccccCccccccCCCCcccceeehhHHHHHHH
Q 003926 632 LPLLAE------NA--------------------------EKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEII 679 (786)
Q Consensus 632 l~~~~~------~~--------------------------~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ell 679 (786)
...... .. .......++..|.+||...+..-...+|+|++|++++|.+
T Consensus 950 t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l 1029 (1205)
T KOG0606|consen 950 TLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVL 1029 (1205)
T ss_pred cccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhh
Confidence 421100 00 0011234667889999998888888999999999999999
Q ss_pred hCCCCCCCchhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHH---HHHHHHHHH
Q 003926 680 VGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVE---DVLWNLQFA 756 (786)
Q Consensus 680 tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~---evl~~l~~~ 756 (786)
+|.+||.....+.+.+.+.. +.+.-| ..+.+....+-+++.+.+..+|.+|-.|. ++-.|.+|.
T Consensus 1030 ~g~pp~na~tpq~~f~ni~~---------~~~~~p----~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~ 1096 (1205)
T KOG0606|consen 1030 TGIPPFNAETPQQIFENILN---------RDIPWP----EGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQ 1096 (1205)
T ss_pred cCCCCCCCcchhhhhhcccc---------CCCCCC----CCccccChhhhhhhhhhhccCchhccCcccccccccCCccC
Confidence 99999976554433211110 000000 11122223344566677889999998776 666666654
|
|
| >KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.84 E-value=3.6e-10 Score=114.90 Aligned_cols=187 Identities=24% Similarity=0.256 Sum_probs=98.4
Q ss_pred CCCCCcEEEcccccCCCCCCc----ccCCCCCCCEEEccCCcCcccCC-------------ccccCCCCCCEEEccCCcC
Q 003926 153 ILTSLQTLILDENMLAGRVPD----WLGSLPILAVLSLRNNMFNGTLP-------------DSFSYLENLRVLALSNNHF 215 (786)
Q Consensus 153 ~l~~L~~L~L~~N~l~~~~p~----~~~~l~~L~~L~Ls~N~l~~~~p-------------~~~~~l~~L~~L~Ls~N~l 215 (786)
.+++|+.|+||.|.|.-..+. .+.++++|++|.|.+|.+.-.-- .-...-+.|+++..++|++
T Consensus 90 ~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrl 169 (382)
T KOG1909|consen 90 GCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRL 169 (382)
T ss_pred cCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeecccc
Confidence 344555555555555432222 23345555555555555431100 1122234566666666665
Q ss_pred CcCCC-----CCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhhcCccccceeeccCccccC----C
Q 003926 216 YGEVP-----DFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVG----P 286 (786)
Q Consensus 216 ~~~~p-----~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~----~ 286 (786)
....- .|...+.|+.+.++.|.+...-- ..+-..|..+++|+.|||..|-|+. .
T Consensus 170 en~ga~~~A~~~~~~~~leevr~~qN~I~~eG~-----------------~al~eal~~~~~LevLdl~DNtft~egs~~ 232 (382)
T KOG1909|consen 170 ENGGATALAEAFQSHPTLEEVRLSQNGIRPEGV-----------------TALAEALEHCPHLEVLDLRDNTFTLEGSVA 232 (382)
T ss_pred ccccHHHHHHHHHhccccceEEEecccccCchh-----------------HHHHHHHHhCCcceeeecccchhhhHHHHH
Confidence 32211 13444556666666555421100 0122345666777777777777653 2
Q ss_pred CchhhCCCCCCcEEEeecCCCCcccCccC-----CCCCCCCEEeCcCCcCCc----cCChhhhcCCCCcEEEcCCcccC
Q 003926 287 FPQALLSLPSITYLNIADNKLTGKLFDDL-----SCNPELGFVDLSSNLLTG----QLPNCLLAGSKNRVVLYARNCLA 356 (786)
Q Consensus 287 ~p~~~~~l~~L~~L~l~~N~l~g~~~~~~-----~~~~~L~~l~ls~N~l~g----~~p~~~~~~~~~~~~~~~~N~l~ 356 (786)
+...+..+++|+.|+++++.+...-...+ ...|.|+.|.+.+|.++- .+-.++...+.+..|++..|.+.
T Consensus 233 LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 233 LAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred HHHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 33456667777777777777764322211 235677788888887762 33445555666777777777763
|
|
| >KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.79 E-value=5.4e-10 Score=113.66 Aligned_cols=236 Identities=25% Similarity=0.304 Sum_probs=137.9
Q ss_pred CCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccC----CCc-------cCCCCCCCCEEeccCCC
Q 003926 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGP----LSG-------KISRLSSLEILNMSSNF 142 (786)
Q Consensus 74 ~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~----~~~-------~~~~l~~L~~L~Ls~N~ 142 (786)
..++.|+|+||.+...-. -.+-..+.+.++|+..++++. ++|. +|+ .+-..++|++||||.|.
T Consensus 30 ~s~~~l~lsgnt~G~EAa-----~~i~~~L~~~~~L~~v~~sd~-ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA 103 (382)
T KOG1909|consen 30 DSLTKLDLSGNTFGTEAA-----RAIAKVLASKKELREVNLSDM-FTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNA 103 (382)
T ss_pred CceEEEeccCCchhHHHH-----HHHHHHHhhcccceeeehHhh-hcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccc
Confidence 468999999986431000 001123445667777777653 3332 222 34455677777777777
Q ss_pred CCCCCCcc----ccCCCCCcEEEcccccCCCCC-------------CcccCCCCCCCEEEccCCcCccc----CCccccC
Q 003926 143 LNGAIPQE----LSILTSLQTLILDENMLAGRV-------------PDWLGSLPILAVLSLRNNMFNGT----LPDSFSY 201 (786)
Q Consensus 143 l~~~~p~~----~~~l~~L~~L~L~~N~l~~~~-------------p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~ 201 (786)
|.-.-++. +..++.|+.|.|.+|.+.-.- -...++-++|+++..++|++... +...|..
T Consensus 104 ~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~ 183 (382)
T KOG1909|consen 104 FGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQS 183 (382)
T ss_pred cCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHHh
Confidence 75444433 345677777777777664111 11234556788888888887521 2234666
Q ss_pred CCCCCEEEccCCcCCcC-C----CCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhhcCcccccee
Q 003926 202 LENLRVLALSNNHFYGE-V----PDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRL 276 (786)
Q Consensus 202 l~~L~~L~Ls~N~l~~~-~----p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L 276 (786)
.+.|+.+.++.|.+.-. + -.|..+++|++|||.+|-++..-. ..+...+..+++|+.|
T Consensus 184 ~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs-----------------~~LakaL~s~~~L~El 246 (382)
T KOG1909|consen 184 HPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGS-----------------VALAKALSSWPHLREL 246 (382)
T ss_pred ccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHH-----------------HHHHHHhcccchheee
Confidence 77888888888877421 1 126778888888888887642110 0122334455666677
Q ss_pred eccCccccCCCchhh-----CCCCCCcEEEeecCCCCcc----cCccCCCCCCCCEEeCcCCcCC
Q 003926 277 DLSSNRFVGPFPQAL-----LSLPSITYLNIADNKLTGK----LFDDLSCNPELGFVDLSSNLLT 332 (786)
Q Consensus 277 ~Ls~N~l~~~~p~~~-----~~l~~L~~L~l~~N~l~g~----~~~~~~~~~~L~~l~ls~N~l~ 332 (786)
+++++.+...=...| ...++|+.|.|.+|.++-. +...+...+.|..|+|++|.+.
T Consensus 247 ~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 247 NLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred cccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 777666653222221 2356777777777777632 2223344677788888888873
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=98.77 E-value=3.4e-09 Score=101.44 Aligned_cols=109 Identities=31% Similarity=0.410 Sum_probs=39.8
Q ss_pred cCCCCCCCCEEeccCCCCCCCCCcccc-CCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccc-cCCC
Q 003926 126 KISRLSSLEILNMSSNFLNGAIPQELS-ILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSF-SYLE 203 (786)
Q Consensus 126 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~ 203 (786)
.+.+..+++.|+|.+|.|+.+ +.++ .+.+|+.|+|++|.++. ++ .+..++.|+.|++++|+++. +.+.+ ..++
T Consensus 14 ~~~n~~~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~-l~-~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp 88 (175)
T PF14580_consen 14 QYNNPVKLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITK-LE-GLPGLPRLKTLDLSNNRISS-ISEGLDKNLP 88 (175)
T ss_dssp ------------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S--CHHHHHH-T
T ss_pred ccccccccccccccccccccc--cchhhhhcCCCEEECCCCCCcc-cc-CccChhhhhhcccCCCCCCc-cccchHHhCC
Confidence 355666789999999999853 3465 58899999999999984 33 57789999999999999985 44444 4689
Q ss_pred CCCEEEccCCcCCcC--CCCCCCCCcCCEEEcccCCCC
Q 003926 204 NLRVLALSNNHFYGE--VPDFSGLTYLQVLDLENNALG 239 (786)
Q Consensus 204 ~L~~L~Ls~N~l~~~--~p~~~~l~~L~~L~L~~N~l~ 239 (786)
+|+.|+|++|++... +-.+..+++|++|+|.+|.+.
T Consensus 89 ~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 89 NLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp T--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred cCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 999999999999742 334677888888888888663
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.75 E-value=5.9e-08 Score=91.38 Aligned_cols=131 Identities=15% Similarity=0.245 Sum_probs=93.1
Q ss_pred CccCCCCCceeEEEEecCCcEEEEEEecccCCCC--------hHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 483 AFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHS--------TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~--------~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
..+++|+-+.+|.+.+. |..+.+|.-..+.... .+.-.+|+.++++++---|-.-.=+..+ .+.
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD-------~~~ 73 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVD-------PDN 73 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEc-------CCC
Confidence 35789999999999875 4446666543332211 1346789999998764333221112222 345
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
..|+|||+++-.|.+.+... +..++..+-+-+.-||.. +|||+||.++||.+..+. +.+.|||++.
T Consensus 74 ~~I~me~I~G~~lkd~l~~~----------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~ 139 (204)
T COG3642 74 GLIVMEYIEGELLKDALEEA----------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGE 139 (204)
T ss_pred CEEEEEEeCChhHHHHHHhc----------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCccc
Confidence 68999999999999888752 245666677778889998 999999999999998765 8899999975
Q ss_pred c
Q 003926 635 L 635 (786)
Q Consensus 635 ~ 635 (786)
.
T Consensus 140 ~ 140 (204)
T COG3642 140 F 140 (204)
T ss_pred c
Confidence 3
|
|
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.74 E-value=5.7e-09 Score=82.05 Aligned_cols=60 Identities=33% Similarity=0.383 Sum_probs=34.4
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEccccc
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENM 166 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 166 (786)
|+|++|+|++|+++...++.|.++++|++|+|++|.++...|..|.++++|++|++++|+
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 345556666665555555555555666666666555555555555555555555555554
|
... |
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.73 E-value=6.8e-09 Score=81.60 Aligned_cols=59 Identities=46% Similarity=0.618 Sum_probs=28.4
Q ss_pred CCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCc
Q 003926 156 SLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNH 214 (786)
Q Consensus 156 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 214 (786)
+|++|+|++|+++...+..|.++++|++|++++|.++...|..|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34444444444443333444445555555555555544444445555555555555544
|
... |
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.68 E-value=8.2e-08 Score=102.89 Aligned_cols=171 Identities=19% Similarity=0.272 Sum_probs=125.0
Q ss_pred CceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEEEEecCCC-CCh
Q 003926 490 QGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPN-GTL 567 (786)
Q Consensus 490 fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV~Ey~~~-GsL 567 (786)
-.+.||+... ||..|+.|++...+......-..-++.++++.|.|||+|..++....+.+ ..+++||+|.|+ ++|
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D---~SlvlvYDYyP~s~TL 365 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGD---LSLVLVYDYYPSSPTL 365 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCc---ceEEEEEecCCCCchH
Confidence 3468999854 79999999995443332223345678899999999999999887544433 458999999985 678
Q ss_pred hHHhhcCC------------CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 568 RSWISEGH------------AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 568 ~~~l~~~~------------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
.++-.... .....+....+.++.|++.||.++|+. +..-+-|.+++||++++.+++|+..|..-.
T Consensus 366 ~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dv 442 (655)
T KOG3741|consen 366 YDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDV 442 (655)
T ss_pred HHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceee
Confidence 77653211 123467788999999999999999997 888899999999999999889887776433
Q ss_pred cccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCC
Q 003926 636 AENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR 682 (786)
Q Consensus 636 ~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~ 682 (786)
..... . +.+.. -.+-|.=.||.+++.|.||.
T Consensus 443 l~~d~-----------~--~~le~---~Qq~D~~~lG~ll~aLAt~~ 473 (655)
T KOG3741|consen 443 LQEDP-----------T--EPLES---QQQNDLRDLGLLLLALATGT 473 (655)
T ss_pred ecCCC-----------C--cchhH---HhhhhHHHHHHHHHHHhhcc
Confidence 22111 0 11111 13568888999999999994
|
|
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.64 E-value=3.4e-08 Score=117.63 Aligned_cols=86 Identities=29% Similarity=0.333 Sum_probs=55.8
Q ss_pred cCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCC
Q 003926 103 LVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILA 182 (786)
Q Consensus 103 l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 182 (786)
|..++.|++|||++|.=.+.+|..+++|-+|++|||++..++ .+|..+.+|.+|.+|++..+.....+|.....|++|+
T Consensus 567 f~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr 645 (889)
T KOG4658|consen 567 FRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLR 645 (889)
T ss_pred HhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhccccc
Confidence 445666666666666666666666666666666666666666 5666666666666666666655545555556666666
Q ss_pred EEEccCC
Q 003926 183 VLSLRNN 189 (786)
Q Consensus 183 ~L~Ls~N 189 (786)
+|.+..-
T Consensus 646 ~L~l~~s 652 (889)
T KOG4658|consen 646 VLRLPRS 652 (889)
T ss_pred EEEeecc
Confidence 6666544
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.61 E-value=2.9e-07 Score=86.20 Aligned_cols=142 Identities=16% Similarity=0.232 Sum_probs=96.6
Q ss_pred ccCccCCCCCceeEEEEecCCcEEEEEEecccCC-C-------ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 481 TSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKC-H-------STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 481 ~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~-~-------~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
....+-+|+-+.|+++.+. |+...||.--.+.. . ..+...+|++++.+++--.|..-.=++.+.
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~------- 82 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDT------- 82 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEec-------
Confidence 4577889999999999987 67767775433222 1 124578899999987643332222222221
Q ss_pred ceEEEEEecCCC-CChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCc---cccc
Q 003926 553 SRIFLIFEYVPN-GTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV---AKIS 628 (786)
Q Consensus 553 ~~~~LV~Ey~~~-GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~---~kl~ 628 (786)
..-.|+|||.++ -++.+++.........+ ......+..|-+.+.-||.+ +|||+||..+||++..++. +.+.
T Consensus 83 ~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d-~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lI 158 (229)
T KOG3087|consen 83 YGGQIYMEFIDGASTVKDFILSTMEDESED-EGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILI 158 (229)
T ss_pred CCCeEEEEeccchhHHHHHHHHHccCcccc-hhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEE
Confidence 123799999976 37888876532222222 22256778888899999998 9999999999999876543 4789
Q ss_pred CCCccc
Q 003926 629 SYNLPL 634 (786)
Q Consensus 629 DfGl~~ 634 (786)
|||++.
T Consensus 159 dfgls~ 164 (229)
T KOG3087|consen 159 DFGLSS 164 (229)
T ss_pred eecchh
Confidence 999964
|
|
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.57 E-value=4.1e-08 Score=116.90 Aligned_cols=250 Identities=20% Similarity=0.180 Sum_probs=156.4
Q ss_pred CCCCCCEEEccCCC--CccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCC
Q 003926 105 KLPDLKVLRLVSLG--LWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILA 182 (786)
Q Consensus 105 ~l~~L~~L~L~~n~--l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 182 (786)
+.++|++|-+.+|. +.-...+.|..++.|++||||+|.=-+.+|..+++|-+|++|+|++..++ .+|..+++|..|.
T Consensus 543 ~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~ 621 (889)
T KOG4658|consen 543 ENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLI 621 (889)
T ss_pred CCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhh
Confidence 45678889888886 44444455788999999999999888899999999999999999999998 8899999999999
Q ss_pred EEEccCCcCcccCCccccCCCCCCEEEccCCcCCcC---CCCCCCCCcCCEEEcccCCCCCCCC-ccccc----hhhhhc
Q 003926 183 VLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGE---VPDFSGLTYLQVLDLENNALGPQFP-KVGKK----LVTMIL 254 (786)
Q Consensus 183 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~l~~L~~L~L~~N~l~~~~p-~~~~~----L~~L~l 254 (786)
+|++..+.....+|.....|++|++|.+........ +-++..|.+|+.|............ ..... .+.+.+
T Consensus 622 ~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~~~~e~l~~~~~L~~~~~~l~~ 701 (889)
T KOG4658|consen 622 YLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSVLLLEDLLGMTRLRSLLQSLSI 701 (889)
T ss_pred eeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecchhHhHhhhhhhHHHHHHhHhhhh
Confidence 999998887667777778899999999876553322 1234556666666654333200000 01112 223333
Q ss_pred cCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCC------CCcEEEeecCCCCcccCccCCCCCCCCEEeCcC
Q 003926 255 SKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLP------SITYLNIADNKLTGKLFDDLSCNPELGFVDLSS 328 (786)
Q Consensus 255 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~------~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~ 328 (786)
..+.. ...+..+..+.+|+.|.+.++.+....-....... ++..+...+... -..+.+....++|+.|.+..
T Consensus 702 ~~~~~-~~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~~~~~~~-~r~l~~~~f~~~L~~l~l~~ 779 (889)
T KOG4658|consen 702 EGCSK-RTLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVSILNCHM-LRDLTWLLFAPHLTSLSLVS 779 (889)
T ss_pred ccccc-ceeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHHhhcccc-ccccchhhccCcccEEEEec
Confidence 33222 33455677888888888888887643322221111 111111111110 11223334567888888887
Q ss_pred CcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 329 NLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 329 N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
......+.+.......+..+.+..+.+.+
T Consensus 780 ~~~~e~~i~~~k~~~~l~~~i~~f~~~~~ 808 (889)
T KOG4658|consen 780 CRLLEDIIPKLKALLELKELILPFNKLEG 808 (889)
T ss_pred ccccccCCCHHHHhhhcccEEeccccccc
Confidence 66554444444444444434444444443
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.51 E-value=4.4e-07 Score=88.39 Aligned_cols=124 Identities=15% Similarity=0.186 Sum_probs=78.9
Q ss_pred eeEEEEecCCcEEEEEEecccCC-------------C---------C----hHHHHHHHHHHhcCCCC--Ccceeeeeee
Q 003926 492 QMYRGRLKNGTFVAIRCLKMKKC-------------H---------S----TRNFMHHIELISKLRHR--HLVSALGHCF 543 (786)
Q Consensus 492 ~Vy~~~~~~g~~vAvK~l~~~~~-------------~---------~----~~~f~~E~~~l~~l~H~--NIv~l~g~~~ 543 (786)
.||.|...+|..||||..+.... . . .....+|.+.|.++..- ++-+.+++-
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 48999998899999998764211 0 0 12356899999999866 444544331
Q ss_pred eccccCCCCceEEEEEecCC--CCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhh-hcCCCCCccccCCCCCceeec
Q 003926 544 ECYFDDSSVSRIFLIFEYVP--NGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFL-HTGIVPGVFSNNLKITDILLD 620 (786)
Q Consensus 544 ~~~~~~~~~~~~~LV~Ey~~--~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yL-H~~~~~~ivHrdlk~~NILld 620 (786)
.-.|||||++ +..+..+.... ++......++.++...+..+ |.. +|||+|+.+.||+++
T Consensus 80 ----------~~~ivME~I~~~G~~~~~l~~~~-----~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~ 141 (188)
T PF01163_consen 80 ----------RNVIVMEYIGEDGVPLPRLKDVD-----LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVD 141 (188)
T ss_dssp ----------TTEEEEE--EETTEEGGCHHHCG-----GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEE
T ss_pred ----------CCEEEEEecCCCccchhhHHhcc-----ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEee
Confidence 2379999999 55554433221 11223455666777766654 676 999999999999999
Q ss_pred CCCcccccCCCcccc
Q 003926 621 QNLVAKISSYNLPLL 635 (786)
Q Consensus 621 ~~~~~kl~DfGl~~~ 635 (786)
++ .+.+.|||.+..
T Consensus 142 ~~-~~~iIDf~qav~ 155 (188)
T PF01163_consen 142 DG-KVYIIDFGQAVD 155 (188)
T ss_dssp TT-CEEE--GTTEEE
T ss_pred cc-eEEEEecCccee
Confidence 88 899999998643
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.5e-06 Score=89.91 Aligned_cols=145 Identities=12% Similarity=0.099 Sum_probs=96.9
Q ss_pred CccCCCCCceeEEEEecCCcEEEEEEecccCC-----------CChHHHHHHHHHHhcCCCCCc--ceeeeeeeeccccC
Q 003926 483 AFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKC-----------HSTRNFMHHIELISKLRHRHL--VSALGHCFECYFDD 549 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~-----------~~~~~f~~E~~~l~~l~H~NI--v~l~g~~~~~~~~~ 549 (786)
+.+-+.....|++..+ +|+.|.||+...... .....+.+|...+.++...+| .+.+++.... .+
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~--~~ 104 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERG--SN 104 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEec--CC
Confidence 3444444445777766 477899997643221 011247889988888743333 3334443221 01
Q ss_pred CCCceEEEEEecCCCC-ChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC-------
Q 003926 550 SSVSRIFLIFEYVPNG-TLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ------- 621 (786)
Q Consensus 550 ~~~~~~~LV~Ey~~~G-sL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~------- 621 (786)
......+||+||+++- +|.+++.... ....+...+..++.++++.+.-||.. +|+|+|++++|||++.
T Consensus 105 ~~~~~s~LVte~l~~~~sL~~~~~~~~-~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~ 180 (268)
T PRK15123 105 PATRTSFIITEDLAPTISLEDYCADWA-TNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREE 180 (268)
T ss_pred CccceeEEEEeeCCCCccHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCC
Confidence 1123468999999975 8999885321 12345566778899999999999998 9999999999999985
Q ss_pred CCcccccCCCccc
Q 003926 622 NLVAKISSYNLPL 634 (786)
Q Consensus 622 ~~~~kl~DfGl~~ 634 (786)
+..+.+.||+.+.
T Consensus 181 ~~~~~LIDl~r~~ 193 (268)
T PRK15123 181 DLKLSVIDLHRAQ 193 (268)
T ss_pred CceEEEEECCccc
Confidence 4678899999753
|
|
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.3e-08 Score=112.16 Aligned_cols=194 Identities=28% Similarity=0.258 Sum_probs=107.5
Q ss_pred CCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccC-CCCCcEEEcccccCC----------CCCCc
Q 003926 105 KLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSI-LTSLQTLILDENMLA----------GRVPD 173 (786)
Q Consensus 105 ~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~L~~N~l~----------~~~p~ 173 (786)
++..|+.+....-.-+| |-.+..+.+|++|.|.++.|... ..+.. -..|+.|.-. |.+. |.+-.
T Consensus 85 kt~~lkl~~~pa~~pt~--pi~ifpF~sLr~LElrg~~L~~~--~GL~~lr~qLe~LIC~-~Sl~Al~~v~ascggd~~n 159 (1096)
T KOG1859|consen 85 KTKVLKLLPSPARDPTE--PISIFPFRSLRVLELRGCDLSTA--KGLQELRHQLEKLICH-NSLDALRHVFASCGGDISN 159 (1096)
T ss_pred hheeeeecccCCCCCCC--CceeccccceeeEEecCcchhhh--hhhHHHHHhhhhhhhh-ccHHHHHHHHHHhcccccc
Confidence 33334444444444444 55688899999999999988631 11111 1123332211 1110 11111
Q ss_pred ccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCC--Cccccchhh
Q 003926 174 WLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQF--PKVGKKLVT 251 (786)
Q Consensus 174 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~--p~~~~~L~~ 251 (786)
++. .-.|...+.++|.+. ..-.++.-++.|+.|+|++|+++..- .+..++.|+.|||++|.|.... -..+-.|..
T Consensus 160 s~~-Wn~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v~-~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~L~~ 236 (1096)
T KOG1859|consen 160 SPV-WNKLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKVD-NLRRLPKLKHLDLSYNCLRHVPQLSMVGCKLQL 236 (1096)
T ss_pred chh-hhhHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhhH-HHHhcccccccccccchhccccccchhhhhhee
Confidence 110 123566666666665 34455666666777777777766432 4556667777777777664221 112334677
Q ss_pred hhccCCccCCcChhhhcCccccceeeccCccccCCC-chhhCCCCCCcEEEeecCCCC
Q 003926 252 MILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPF-PQALLSLPSITYLNIADNKLT 308 (786)
Q Consensus 252 L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~ 308 (786)
|++++|.++.. ..+.++.+|+.|||++|-|.+-- -..++.|..|+.|+|.+|.+.
T Consensus 237 L~lrnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 237 LNLRNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred eeecccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 77777776543 24667777888888888776521 123455667777788777764
|
|
| >KOG2137 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.7e-07 Score=104.22 Aligned_cols=150 Identities=17% Similarity=0.223 Sum_probs=98.0
Q ss_pred HHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccccccccc----------cccccccccCccccccC
Q 003926 591 GVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVG----------HVIPYSGSIDPTNSARG 660 (786)
Q Consensus 591 ~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~~~~----------~~~~~~~~~aPe~~~~~ 660 (786)
+++.|+.|+|+. +++||++|.|++|.++.++..|++.|+.+........+. -......|.|||++...
T Consensus 107 ~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~ 184 (700)
T KOG2137|consen 107 NVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGT 184 (700)
T ss_pred cccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccc
Confidence 455999999987 699999999999999999999999999875443311110 01123457899998887
Q ss_pred CCCcccceeehhHHHHHHH-hCCCCCCCchhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCC
Q 003926 661 KLEEKIDIYDFGLILLEII-VGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN 739 (786)
Q Consensus 661 ~~t~ksDVwSfGvvl~Ell-tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~d 739 (786)
..+.++|+||+||++|-+. .|++-+............. ...+... .....+.+.++.+=+.+.+..+
T Consensus 185 ~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~-----------~~~~~~~-~~~s~~~p~el~~~l~k~l~~~ 252 (700)
T KOG2137|consen 185 TNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSR-----------NLLNAGA-FGYSNNLPSELRESLKKLLNGD 252 (700)
T ss_pred cccccccceeeeeEEEEEecCCcchhhccCCcchhhhhh-----------ccccccc-ccccccCcHHHHHHHHHHhcCC
Confidence 7889999999999999998 5665554332211111100 0000000 0011122233444445678899
Q ss_pred CCCCCCHHHHHHHHH
Q 003926 740 PAERPSVEDVLWNLQ 754 (786)
Q Consensus 740 P~~RPt~~evl~~l~ 754 (786)
+..||++.++...++
T Consensus 253 ~~~rp~~~~l~~~~f 267 (700)
T KOG2137|consen 253 SAVRPTLDLLLSIPF 267 (700)
T ss_pred cccCcchhhhhcccc
Confidence 999999888875444
|
|
| >PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape [] | Back alignment and domain information |
|---|
Probab=98.26 E-value=1.5e-06 Score=62.58 Aligned_cols=38 Identities=39% Similarity=0.691 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHhcCC-CC-CCCCCCCCC--CCCCCCCCCCCccEEeC
Q 003926 30 SSQAQTLLRIQGLLN-NP-AVLSSWNIT--TEFCNTEPTSSLTVVCY 72 (786)
Q Consensus 30 ~~~~~~ll~~k~~~~-~~-~~l~~W~~~--~~~C~w~~~~~~~v~c~ 72 (786)
++|++||++||+.+. +| ..+.+|+.+ .+||+|. ||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C~W~-----GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPCSWS-----GVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CCCST-----TEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCeeec-----cEEeC
Confidence 679999999999998 45 589999987 7999998 59994
|
LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A. |
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.24 E-value=3.5e-08 Score=108.82 Aligned_cols=101 Identities=32% Similarity=0.387 Sum_probs=54.3
Q ss_pred CCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCc-cccCCCCCCEEEcc
Q 003926 133 LEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPD-SFSYLENLRVLALS 211 (786)
Q Consensus 133 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls 211 (786)
|...+.++|.+. .+..++.-++.|+.|+|++|+++.. +.+..|+.|++|||++|.+. .+|. ....+. |..|.|+
T Consensus 166 L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~lr 240 (1096)
T KOG1859|consen 166 LATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNLR 240 (1096)
T ss_pred HhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhhhh-heeeeec
Confidence 445555566554 4445555556666666666666522 15555666666666666665 2332 122232 6666666
Q ss_pred CCcCCcCCCCCCCCCcCCEEEcccCCCC
Q 003926 212 NNHFYGEVPDFSGLTYLQVLDLENNALG 239 (786)
Q Consensus 212 ~N~l~~~~p~~~~l~~L~~L~L~~N~l~ 239 (786)
+|.++ .+.++.+|.+|+.||+++|-|.
T Consensus 241 nN~l~-tL~gie~LksL~~LDlsyNll~ 267 (1096)
T KOG1859|consen 241 NNALT-TLRGIENLKSLYGLDLSYNLLS 267 (1096)
T ss_pred ccHHH-hhhhHHhhhhhhccchhHhhhh
Confidence 66554 2334555566666666666554
|
|
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.22 E-value=4.2e-06 Score=83.80 Aligned_cols=131 Identities=14% Similarity=0.209 Sum_probs=88.9
Q ss_pred CccCccCCCCCceeEEEEecCCcEEEEEEecccCC----------------C------ChHHHHHHHHHHhcCCCC--Cc
Q 003926 480 DTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKC----------------H------STRNFMHHIELISKLRHR--HL 535 (786)
Q Consensus 480 ~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~----------------~------~~~~f~~E~~~l~~l~H~--NI 535 (786)
..++.||.|.-+.||.|..+.|..+|||.=+.... + ......+|.++|.++.-. .|
T Consensus 94 ~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~V 173 (304)
T COG0478 94 AIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKV 173 (304)
T ss_pred hhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCC
Confidence 35689999999999999999999999995432110 0 012356899999998655 55
Q ss_pred ceeeeeeeeccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCC
Q 003926 536 VSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKIT 615 (786)
Q Consensus 536 v~l~g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~ 615 (786)
-+-+++ +.-.+||||+++-.|...=-. .-.....+. .|..-+.-.-+. +|||+|+..-
T Consensus 174 P~P~~~-----------nRHaVvMe~ieG~eL~~~r~~-----~en~~~il~---~il~~~~~~~~~---GiVHGDlSef 231 (304)
T COG0478 174 PKPIAW-----------NRHAVVMEYIEGVELYRLRLD-----VENPDEILD---KILEEVRKAYRR---GIVHGDLSEF 231 (304)
T ss_pred CCcccc-----------ccceeeeehcccceeecccCc-----ccCHHHHHH---HHHHHHHHHHHc---CccccCCchh
Confidence 555543 335899999998666543100 112222332 233322222233 9999999999
Q ss_pred ceeecCCCcccccCCCc
Q 003926 616 DILLDQNLVAKISSYNL 632 (786)
Q Consensus 616 NILld~~~~~kl~DfGl 632 (786)
||++++++.+.+.||--
T Consensus 232 NIlV~~dg~~~vIDwPQ 248 (304)
T COG0478 232 NILVTEDGDIVVIDWPQ 248 (304)
T ss_pred eEEEecCCCEEEEeCcc
Confidence 99999999999999854
|
|
| >PRK09902 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.15 E-value=2.3e-05 Score=76.85 Aligned_cols=141 Identities=9% Similarity=0.064 Sum_probs=101.3
Q ss_pred cCCCCCceeEEEEecCCcEEEEEEecccC------CCChHHHHHHHHHHhcCCCCC--cceeeeeeeeccccCCCCceEE
Q 003926 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKK------CHSTRNFMHHIELISKLRHRH--LVSALGHCFECYFDDSSVSRIF 556 (786)
Q Consensus 485 iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~------~~~~~~f~~E~~~l~~l~H~N--Iv~l~g~~~~~~~~~~~~~~~~ 556 (786)
-|+||.+-||+-.+. |..+-+|+-...- ......|.+|...+.++...+ +.+.. ++.. ......-..+
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~--~k~~~~~rA~ 101 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEA--VKIEGEWRAL 101 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeee--eccCCceEEE
Confidence 477999999998776 4468889765221 124568999999999985433 33333 3221 1112234578
Q ss_pred EEEecCCC-CChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCc--ccccCCCcc
Q 003926 557 LIFEYVPN-GTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV--AKISSYNLP 633 (786)
Q Consensus 557 LV~Ey~~~-GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~--~kl~DfGl~ 633 (786)
||+|-+++ -||.+++.+.. ....+...+..+..++++.++-||+. ++.|+|+-+.||+++.++. +++.||.-+
T Consensus 102 LVTe~L~g~~~L~~~l~~~~-~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk~ 177 (216)
T PRK09902 102 LVTEDMAGFISIADWYAQHA-VSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEKS 177 (216)
T ss_pred EEEEeCCCCccHHHHHhcCC-cCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhcc
Confidence 99997763 58999986532 22456777889999999999999998 9999999999999986655 888888765
|
|
| >KOG2982 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.14 E-value=2.6e-07 Score=92.19 Aligned_cols=85 Identities=26% Similarity=0.304 Sum_probs=39.2
Q ss_pred CCCCCEEeccCCCCCC--CCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCC-ccccCCCCCC
Q 003926 130 LSSLEILNMSSNFLNG--AIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLP-DSFSYLENLR 206 (786)
Q Consensus 130 l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~ 206 (786)
.+.++.|||.+|.|+. .+-.-+.+|+.|++|+|+.|+++..|...-..+.+|++|-|.+..+.-.-- ..+..++.++
T Consensus 70 ~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vt 149 (418)
T KOG2982|consen 70 VTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVT 149 (418)
T ss_pred hhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhh
Confidence 3445555555555542 122223455555555555555543332211234455555555544432222 2234555556
Q ss_pred EEEccCCc
Q 003926 207 VLALSNNH 214 (786)
Q Consensus 207 ~L~Ls~N~ 214 (786)
.|.+|.|+
T Consensus 150 elHmS~N~ 157 (418)
T KOG2982|consen 150 ELHMSDNS 157 (418)
T ss_pred hhhhccch
Confidence 66666553
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.09 E-value=1.7e-06 Score=95.24 Aligned_cols=181 Identities=13% Similarity=0.124 Sum_probs=125.6
Q ss_pred CccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCC-cceeeeeeeeccccCCCCceEEEEEec
Q 003926 483 AFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRH-LVSALGHCFECYFDDSSVSRIFLIFEY 561 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~N-Iv~l~g~~~~~~~~~~~~~~~~LV~Ey 561 (786)
.-+++|+++++||.+-.-.....++.+... .+..-++++|.+++||| .|..++-+ ...+..+++++|
T Consensus 248 h~fvK~altknpKkRptaeklL~h~fvs~~-----l~~rl~~eLLdK~n~P~~~v~~~~d~-------~~E~~~~i~~~i 315 (829)
T KOG0576|consen 248 HNFVKGALTKNPKKRPTAEKLLQHPFVSQT-----LSRRLAIELLDKVNNPNPVVRYLEDY-------DGEDYLWIPMRI 315 (829)
T ss_pred HHHHHHHhcCCCccCCChhhheeceeeccc-----hhhHHHHHHHHHccCCCCcccccccC-------Ccccccchhhhh
Confidence 446899999999998322223335555332 44556889999999999 55544422 345778999999
Q ss_pred CCCC-ChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccccccc
Q 003926 562 VPNG-TLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE 640 (786)
Q Consensus 562 ~~~G-sL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~ 640 (786)
+..| +-..-... ....+...+...+...-+++++|+|+. .-+||| ||+..+ ...|..||+.+.......
T Consensus 316 ~s~~rs~~~~~~~--se~~~~~~~~~~~~r~et~~l~~l~~~---~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~ 385 (829)
T KOG0576|consen 316 CSTGRSSALEMTV--SEIALEQYQFAYPLRKETRPLAELHSS---YKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM 385 (829)
T ss_pred hcCCccccccCCh--hhHhhhhhhhhhhhhhhcccccccccc---cccCcc----cccccc-cccccccccCCcccCccc
Confidence 9887 22221110 011233334445556678899999986 457998 777665 568999999876554443
Q ss_pred ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCC
Q 003926 641 KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLK 685 (786)
Q Consensus 641 ~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~ 685 (786)
......++..+++||......+..+.|+|+.|+--.+|.-|-+|.
T Consensus 386 ~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr 430 (829)
T KOG0576|consen 386 KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPR 430 (829)
T ss_pred ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCC
Confidence 444556778889999988889999999999999888888787664
|
|
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.04 E-value=1.1e-07 Score=84.16 Aligned_cols=85 Identities=26% Similarity=0.252 Sum_probs=45.0
Q ss_pred CCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEE
Q 003926 130 LSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLA 209 (786)
Q Consensus 130 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 209 (786)
...|+..+|++|.|....+..-...+.+++|+|++|.++ .+|..+..++.|+.|+++.|.|. ..|..|..|.+|..|+
T Consensus 52 ~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Ld 129 (177)
T KOG4579|consen 52 GYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLD 129 (177)
T ss_pred CceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhc
Confidence 344444566666665322222223445556666666665 45555666666666666666555 3444555555555555
Q ss_pred ccCCcCC
Q 003926 210 LSNNHFY 216 (786)
Q Consensus 210 Ls~N~l~ 216 (786)
..+|.+.
T Consensus 130 s~~na~~ 136 (177)
T KOG4579|consen 130 SPENARA 136 (177)
T ss_pred CCCCccc
Confidence 5555543
|
|
| >PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.02 E-value=2.3e-05 Score=78.39 Aligned_cols=108 Identities=19% Similarity=0.205 Sum_probs=79.8
Q ss_pred HHHHHHHHHHhcCCCC--CcceeeeeeeeccccCCCCceEEEEEecCCCC-ChhHHhhcCCCCCCCCHHHHHHHHHHHHH
Q 003926 518 RNFMHHIELISKLRHR--HLVSALGHCFECYFDDSSVSRIFLIFEYVPNG-TLRSWISEGHAHQSLTWTQRISAAIGVAK 594 (786)
Q Consensus 518 ~~f~~E~~~l~~l~H~--NIv~l~g~~~~~~~~~~~~~~~~LV~Ey~~~G-sL~~~l~~~~~~~~l~~~~~~~ia~~ia~ 594 (786)
..+.+|...+.+++.. .+.+.+++..... ......++|+|++++- +|.+++.... ..+...+..++.++++
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~---~~~~~s~lite~l~~~~~L~~~~~~~~---~~~~~~~~~ll~~l~~ 129 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRK---GGGYRSYLITEALPGAQDLRDLLQQWE---QLDPSQRRELLRALAR 129 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcC---CCceeEEEEEEeCCCcccHHHHHHhhc---ccchhhHHHHHHHHHH
Confidence 4577888877777433 3344455543311 1123468999999974 8999987522 1455667889999999
Q ss_pred HhhhhhcCCCCCccccCCCCCceeecCCC---cccccCCCccc
Q 003926 595 GIQFLHTGIVPGVFSNNLKITDILLDQNL---VAKISSYNLPL 634 (786)
Q Consensus 595 gL~yLH~~~~~~ivHrdlk~~NILld~~~---~~kl~DfGl~~ 634 (786)
.++-||.. +|+|+|+++.|||++.+. .+.+.||+-++
T Consensus 130 ~i~~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~ 169 (206)
T PF06293_consen 130 LIAKLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMR 169 (206)
T ss_pred HHHHHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhce
Confidence 99999998 999999999999999887 78889998754
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 786 | ||||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 6e-37 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 8e-37 | ||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 1e-30 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 5e-30 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 1e-25 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 4e-25 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 5e-25 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 3e-23 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 6e-14 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 6e-14 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 7e-14 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 8e-14 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 9e-14 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 1e-13 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 1e-13 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 1e-13 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 1e-13 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 2e-13 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 2e-13 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 2e-13 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 2e-13 | ||
| 3riz_A | 772 | Crystal Structure Of The Plant Steroid Receptor Bri | 2e-13 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 2e-13 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 2e-13 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 2e-13 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 3e-13 | ||
| 3rgx_A | 768 | Structural Insight Into Brassinosteroid Perception | 3e-13 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 4e-13 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 4e-13 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 5e-13 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 6e-13 | ||
| 3coh_A | 268 | Crystal Structure Of Aurora-A In Complex With A Pen | 1e-12 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 2e-12 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 4e-12 | ||
| 3qbn_A | 281 | Structure Of Human Aurora A In Complex With A Diami | 2e-11 | ||
| 3nrm_A | 283 | Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito | 5e-11 | ||
| 3h0y_A | 268 | Aurora A In Complex With A Bisanilinopyrimidine Len | 5e-11 | ||
| 2j4z_A | 306 | Structure Of Aurora-2 In Complex With Pha-680626 Le | 6e-11 | ||
| 2c6d_A | 275 | Aurora A Kinase Activated Mutant (T287d) In Complex | 6e-11 | ||
| 2j50_A | 280 | Structure Of Aurora-2 In Complex With Pha-739358 Le | 6e-11 | ||
| 1ol6_A | 282 | Structure Of Unphosphorylated D274n Mutant Of Auror | 6e-11 | ||
| 2xne_A | 272 | Structure Of Aurora-A Bound To An Imidazopyrazine I | 6e-11 | ||
| 2xru_A | 280 | Aurora-A T288e Complexed With Pha-828300 Length = 2 | 7e-11 | ||
| 3fdn_A | 279 | Structure-Based Drug Design Of Novel Aurora Kinase | 7e-11 | ||
| 3lau_A | 287 | Crystal Structure Of Aurora2 Kinase In Complex With | 7e-11 | ||
| 2xng_A | 283 | Structure Of Aurora-A Bound To A Selective Imidazop | 8e-11 | ||
| 3o50_A | 267 | Crystal Structure Of Benzamide 9 Bound To Auroraa L | 8e-11 | ||
| 1mq4_A | 272 | Crystal Structure Of Aurora-A Protein Kinase Length | 8e-11 | ||
| 1muo_A | 297 | Crystal Structure Of Aurora-2, An Oncogenic Serine- | 8e-11 | ||
| 2c6e_A | 283 | Aurora A Kinase Activated Mutant (T287d) In Complex | 8e-11 | ||
| 3e5a_A | 268 | Crystal Structure Of Aurora A In Complex With Vx-68 | 8e-11 | ||
| 2x6d_A | 285 | Aurora-A Bound To An Inhibitor Length = 285 | 9e-11 | ||
| 2w1d_A | 275 | Structure Determination Of Aurora Kinase In Complex | 9e-11 | ||
| 3ha6_A | 268 | Crystal Structure Of Aurora A In Complex With Tpx2 | 1e-10 | ||
| 1ol5_A | 282 | Structure Of Aurora-A 122-403, Phosphorylated On Th | 1e-10 | ||
| 2dwb_A | 285 | Aurora-A Kinase Complexed With Amppnp Length = 285 | 1e-10 | ||
| 2bmc_A | 306 | Aurora-2 T287d T288d Complexed With Pha-680632 Leng | 1e-10 | ||
| 2w1c_A | 275 | Structure Determination Of Aurora Kinase In Complex | 1e-10 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 1e-10 | ||
| 3r21_A | 271 | Design, Synthesis, And Biological Evaluation Of Pyr | 2e-10 | ||
| 2wtv_A | 285 | Aurora-A Inhibitor Structure Length = 285 | 2e-10 | ||
| 2wqe_A | 262 | Structure Of S155r Aurora-A Somatic Mutant Length = | 2e-10 | ||
| 3unz_A | 279 | Aurora A In Complex With Rpm1679 Length = 279 | 2e-10 | ||
| 3d14_A | 272 | Crystal Structure Of Mouse Aurora A (Asn186->gly, L | 4e-10 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 5e-10 | ||
| 2qok_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 5e-10 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 5e-10 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 6e-10 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 7e-10 | ||
| 2qol_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596:y | 8e-10 | ||
| 3daj_A | 272 | Crystal Structure Of Aurora A Complexed With An Inh | 9e-10 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 1e-09 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 1e-09 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 1e-09 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 2e-09 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 4e-09 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 4e-09 | ||
| 2qon_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 5e-09 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 5e-09 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 6e-09 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 6e-09 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 6e-09 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 6e-09 | ||
| 3kmw_A | 271 | Crystal Structure Of The IlkALPHA-Parvin Core Compl | 6e-09 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 6e-09 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 7e-09 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 7e-09 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 7e-09 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 7e-09 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 7e-09 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 8e-09 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 8e-09 | ||
| 2qo7_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Dephos | 1e-08 | ||
| 4aoj_A | 329 | Human Trka In Complex With The Inhibitor Az-23 Leng | 1e-08 | ||
| 3cok_A | 278 | Crystal Structure Of Plk4 Kinase Length = 278 | 1e-08 | ||
| 4asz_A | 299 | Crystal Structure Of Apo Trkb Kinase Domain Length | 2e-08 | ||
| 4f0i_A | 300 | Crystal Structure Of Apo Trka Length = 300 | 2e-08 | ||
| 4gt5_A | 306 | Crystal Structure Of The Inactive Trka Kinase Domai | 2e-08 | ||
| 1mqb_A | 333 | Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro | 3e-08 | ||
| 2qob_A | 344 | Human Epha3 Kinase Domain, Base Structure Length = | 4e-08 | ||
| 2wqb_A | 324 | Structure Of The Tie2 Kinase Domain In Complex With | 6e-08 | ||
| 2hk5_A | 270 | Hck Kinase In Complex With Lck Targetted Inhibitor | 1e-07 | ||
| 3v5q_A | 297 | Discovery Of A Selective Trk Inhibitor With Efficac | 1e-07 | ||
| 2hel_A | 306 | Crystal Structure Of A Mutant Epha4 Kinase Domain ( | 1e-07 | ||
| 3s95_A | 310 | Crystal Structure Of The Human Limk1 Kinase Domain | 1e-07 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 1e-07 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 1e-07 | ||
| 2rei_A | 318 | Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep | 2e-07 | ||
| 1opk_A | 495 | Structural Basis For The Auto-Inhibition Of C-Abl T | 2e-07 | ||
| 2v7a_A | 286 | Crystal Structure Of The T315i Abl Mutant In Comple | 2e-07 | ||
| 4gs6_A | 315 | Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz | 2e-07 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 2e-07 | ||
| 1fvr_A | 327 | Tie2 Kinase Domain Length = 327 | 2e-07 | ||
| 2oo8_X | 317 | Synthesis, Structural Analysis, And Sar Studies Of | 2e-07 | ||
| 2gqg_A | 278 | X-Ray Crystal Structure Of Dasatinib (Bms-354825) B | 2e-07 | ||
| 2jed_A | 352 | The Crystal Structure Of The Kinase Domain Of The P | 2e-07 | ||
| 2fo0_A | 495 | Organization Of The Sh3-Sh2 Unit In Active And Inac | 2e-07 | ||
| 3qri_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain I | 2e-07 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 2e-07 | ||
| 2hzi_A | 277 | Abl Kinase Domain In Complex With Pd180970 Length = | 2e-07 | ||
| 1opl_A | 537 | Structural Basis For The Auto-Inhibition Of C-Abl T | 2e-07 | ||
| 1qcf_A | 454 | Crystal Structure Of Hck In Complex With A Src Fami | 2e-07 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 2e-07 | ||
| 2hz0_A | 270 | Abl Kinase Domain In Complex With Nvp-Aeg082 Length | 2e-07 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 3e-07 | ||
| 3k54_A | 283 | Structures Of Human Bruton's Tyrosine Kinase In Act | 3e-07 | ||
| 3oxz_A | 284 | Crystal Structure Of Abl Kinase Domain Bound With A | 3e-07 | ||
| 2qoh_A | 288 | Crystal Structure Of Abl Kinase Bound With Ppy-a Le | 3e-07 | ||
| 2zv7_A | 279 | Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | 3e-07 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 3e-07 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 3e-07 | ||
| 2hyy_A | 273 | Human Abl Kinase Domain In Complex With Imatinib (S | 3e-07 | ||
| 2r2p_A | 295 | Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep | 3e-07 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 3e-07 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 4e-07 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 4e-07 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 4e-07 | ||
| 1k9a_A | 450 | Crystal Structure Analysis Of Full-Length Carboxyl- | 4e-07 | ||
| 1k2p_A | 263 | Crystal Structure Of Bruton's Tyrosine Kinase Domai | 4e-07 | ||
| 3lxn_A | 318 | Structural And Thermodynamic Characterization Of Th | 4e-07 | ||
| 2eva_A | 307 | Structural Basis For The Interaction Of Tak1 Kinase | 4e-07 | ||
| 3p08_A | 267 | Crystal Structure Of The Human Btk Kinase Domain Le | 4e-07 | ||
| 3gen_A | 283 | The 1.6 A Crystal Structure Of Human Bruton's Tyros | 4e-07 | ||
| 3ocs_A | 271 | Crystal Structure Of Bruton's Tyrosine Kinase In Co | 5e-07 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 5e-07 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 5e-07 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 6e-07 | ||
| 3pix_A | 274 | Crystal Structure Of Btk Kinase Domain Complexed Wi | 6e-07 | ||
| 1ad5_A | 438 | Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | 6e-07 | ||
| 2y6m_A | 291 | Crystal Structure Of Epha4 Kinase Domain Length = 2 | 6e-07 | ||
| 2bfx_B | 284 | Mechanism Of Aurora-B Activation By Incenp And Inhi | 7e-07 | ||
| 2xyu_A | 285 | Crystal Structure Of Epha4 Kinase Domain In Complex | 7e-07 | ||
| 2vrx_A | 285 | Structure Of Aurora B Kinase In Complex With Zm4474 | 7e-07 | ||
| 3nyx_A | 302 | Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T | 8e-07 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 8e-07 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 8e-07 | ||
| 3d7t_A | 269 | Structural Basis For The Recognition Of C-Src By It | 8e-07 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 9e-07 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 9e-07 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 9e-07 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 9e-07 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 9e-07 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 9e-07 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 9e-07 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 9e-07 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 9e-07 | ||
| 2bfy_A | 284 | Complex Of Aurora-B With Incenp And Hesperidin. Len | 1e-06 | ||
| 1xjd_A | 345 | Crystal Structure Of Pkc-Theta Complexed With Staur | 1e-06 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 1e-06 | ||
| 4eqm_A | 294 | Structural Analysis Of Staphylococcus Aureus Serine | 1e-06 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 1e-06 | ||
| 3nz0_A | 302 | Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3 | 1e-06 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 1e-06 | ||
| 3gvu_A | 292 | The Crystal Structure Of Human Abl2 In Complex With | 1e-06 | ||
| 3dk3_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 1e-06 | ||
| 1uwh_A | 276 | The Complex Of Wild Type B-Raf And Bay439006 Length | 1e-06 | ||
| 3dk6_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 1e-06 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 2e-06 | ||
| 3kul_B | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 2e-06 | ||
| 3kmu_A | 271 | Crystal Structure Of The IlkALPHA-Parvin Core Compl | 2e-06 | ||
| 2fb8_A | 281 | Structure Of The B-Raf Kinase Domain Bound To Sb-59 | 2e-06 | ||
| 4h58_A | 275 | Braf In Complex With Compound 3 Length = 275 | 2e-06 | ||
| 4aw5_A | 291 | Complex Of The Ephb4 Kinase Domain With An Oxindole | 2e-06 | ||
| 3q96_A | 282 | B-Raf Kinase Domain In Complex With A Tetrahydronap | 3e-06 | ||
| 3ii5_A | 306 | The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi | 3e-06 | ||
| 3d4q_A | 307 | Pyrazole-Based Inhibitors Of B-Raf Kinase Length = | 3e-06 | ||
| 3kul_A | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 3e-06 | ||
| 4e6d_A | 298 | Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W | 3e-06 | ||
| 4dbn_A | 284 | Crystal Structure Of The Kinase Domain Of Human B-R | 3e-06 | ||
| 3oct_A | 265 | Crystal Structure Of Bruton's Tyrosine Kinase Mutan | 3e-06 | ||
| 2vwu_A | 302 | Ephb4 Kinase Domain Inhibitor Complex Length = 302 | 3e-06 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 4e-06 | ||
| 2a19_B | 284 | Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng | 4e-06 | ||
| 3iw4_A | 360 | Crystal Structure Of Pkc Alpha In Complex With Nvp- | 4e-06 | ||
| 4e1z_A | 291 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 5e-06 | ||
| 4e20_A | 290 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 5e-06 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 6e-06 | ||
| 1zy4_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 6e-06 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 6e-06 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 6e-06 | ||
| 4fnw_A | 327 | Crystal Structure Of The Apo F1174l Anaplastic Lymp | 6e-06 | ||
| 1uwj_A | 276 | The Complex Of Mutant V599e B-raf And Bay439006 Len | 6e-06 | ||
| 2hen_A | 286 | Crystal Structure Of The Ephb2 Receptor Kinase Doma | 6e-06 | ||
| 3qgw_A | 286 | Crystal Structure Of Itk Kinase Bound To An Inhibit | 7e-06 | ||
| 3idp_A | 300 | B-Raf V600e Kinase Domain In Complex With An Aminoi | 7e-06 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 7e-06 | ||
| 2yjr_A | 342 | Structure Of F1174l Mutant Anaplastic Lymphoma Kina | 7e-06 | ||
| 4g9r_A | 307 | B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr | 8e-06 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 9e-06 | ||
| 2y7j_A | 365 | Structure Of Human Phosphorylase Kinase, Gamma 2 Le | 9e-06 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 2e-05 | ||
| 4af3_A | 292 | Human Aurora B Kinase In Complex With Incenp And Vx | 2e-05 | ||
| 1yhv_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Two Po | 4e-05 | ||
| 3h9r_A | 330 | Crystal Structure Of The Kinase Domain Of Type I Ac | 5e-05 | ||
| 1zyc_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 5e-05 | ||
| 4dym_A | 301 | Crystal Structure Of The Acvr1 Kinase Domain In Com | 6e-05 | ||
| 2ivs_A | 314 | Crystal Structure Of Non-Phosphorylated Ret Tyrosin | 6e-05 | ||
| 3txo_A | 353 | Pkc Eta Kinase In Complex With A Naphthyridine Leng | 7e-05 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 7e-05 | ||
| 2c30_A | 321 | Crystal Structure Of The Human P21-Activated Kinase | 7e-05 | ||
| 3mtf_A | 301 | Crystal Structure Of The Acvr1 Kinase In Complex Wi | 7e-05 | ||
| 3q4z_A | 306 | Structure Of Unphosphorylated Pak1 Kinase Domain Le | 7e-05 | ||
| 3uiu_A | 306 | Crystal Structure Of Apo-Pkr Kinase Domain Length = | 1e-04 | ||
| 1zxe_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 1e-04 | ||
| 4aaa_A | 331 | Crystal Structure Of The Human Cdkl2 Kinase Domain | 1e-04 | ||
| 2ivv_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 1e-04 | ||
| 3f61_A | 311 | Crystal Structure Of M. Tuberculosis Pknb Leu33aspV | 2e-04 | ||
| 2cdz_A | 303 | Crystal Structure Of The Human P21-Activated Kinase | 2e-04 | ||
| 2q0n_A | 301 | Structure Of Human P21 Activating Kinase 4 (Pak4) I | 2e-04 | ||
| 2ivt_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 2e-04 | ||
| 3fxz_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Ruthen | 2e-04 | ||
| 2bva_A | 292 | Crystal Structure Of The Human P21-Activated Kinase | 2e-04 | ||
| 3mdy_A | 337 | Crystal Structure Of The Cytoplasmic Domain Of The | 2e-04 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 2e-04 | ||
| 1f3m_C | 297 | Crystal Structure Of Human SerineTHREONINE KINASE P | 2e-04 | ||
| 4fif_A | 346 | Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid | 2e-04 | ||
| 2x4z_A | 296 | Crystal Structure Of The Human P21-Activated Kinase | 2e-04 | ||
| 4fie_A | 423 | Full-Length Human Pak4 Length = 423 | 2e-04 | ||
| 3f69_A | 311 | Crystal Structure Of The Mycobacterium Tuberculosis | 3e-04 | ||
| 3my0_A | 305 | Crystal Structure Of The Acvrl1 (Alk1) Kinase Domai | 3e-04 | ||
| 3f88_A | 349 | Glycogen Synthase Kinase 3beta Inhibitor Complex Le | 3e-04 | ||
| 3ori_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain L33d | 4e-04 | ||
| 2y94_A | 476 | Structure Of An Active Form Of Mammalian Ampk Lengt | 4e-04 | ||
| 2i0e_A | 353 | Structure Of Catalytic Domain Of Human Protein Kina | 4e-04 | ||
| 1o6y_A | 299 | Catalytic Domain Of Pknb Kinase From Mycobacterium | 4e-04 | ||
| 1mru_A | 311 | Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob | 4e-04 | ||
| 2yac_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 4e-04 | ||
| 3omv_A | 307 | Crystal Structure Of C-Raf (Raf-1) Length = 307 | 4e-04 | ||
| 3orm_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain D76a | 5e-04 | ||
| 2v5q_A | 315 | Crystal Structure Of Wild-type Plk-1 Kinase Domain | 5e-04 | ||
| 3kb7_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 5e-04 | ||
| 3c1x_A | 373 | Crystal Structure Of The Tyrosine Kinase Domain Of | 5e-04 | ||
| 3pfq_A | 674 | Crystal Structure And Allosteric Activation Of Prot | 5e-04 | ||
| 3dtc_A | 271 | Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp | 6e-04 | ||
| 3qti_A | 314 | C-Met Kinase In Complex With Nvp-Bvu972 Length = 31 | 6e-04 | ||
| 2ou7_A | 335 | Structure Of The Catalytic Domain Of Human Polo-Lik | 6e-04 | ||
| 2clq_A | 295 | Structure Of Mitogen-Activated Protein Kinase Kinas | 7e-04 | ||
| 3thb_A | 333 | Structure Of Plk1 Kinase Domain In Complex With A B | 7e-04 | ||
| 1r0p_A | 312 | Crystal Structure Of The Tyrosine Kinase Domain Of | 7e-04 | ||
| 3dkc_A | 317 | Sgx Clone 5698a65kfg1h1 Length = 317 | 7e-04 | ||
| 3cth_A | 314 | Crystal Structure Of The Tyrosine Kinase Domain Of | 7e-04 | ||
| 4fg7_A | 293 | Crystal Structure Of Human Calcium/calmodulin-depen | 7e-04 | ||
| 3a4p_A | 319 | Human C-Met Kinase Domain Complexed With 6-Benzylox | 8e-04 | ||
| 3vw6_A | 269 | Crystal Structure Of Human Apoptosis Signal-Regulat | 8e-04 | ||
| 4e4l_A | 302 | Jak1 Kinase (Jh1 Domain) In Complex With Compound 3 | 8e-04 | ||
| 3eyg_A | 290 | Crystal Structures Of Jak1 And Jak2 Inhibitor Compl | 9e-04 |
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain Length = 772 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1 Length = 768 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281 | Back alignment and structure |
|
| >pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283 | Back alignment and structure |
|
| >pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268 | Back alignment and structure |
|
| >pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306 | Back alignment and structure |
|
| >pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275 | Back alignment and structure |
|
| >pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280 | Back alignment and structure |
|
| >pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282 | Back alignment and structure |
|
| >pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280 | Back alignment and structure |
|
| >pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279 | Back alignment and structure |
|
| >pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267 | Back alignment and structure |
|
| >pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272 | Back alignment and structure |
|
| >pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297 | Back alignment and structure |
|
| >pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268 | Back alignment and structure |
|
| >pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285 | Back alignment and structure |
|
| >pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268 | Back alignment and structure |
|
| >pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282 | Back alignment and structure |
|
| >pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285 | Back alignment and structure |
|
| >pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306 | Back alignment and structure |
|
| >pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
| >pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271 | Back alignment and structure |
|
| >pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285 | Back alignment and structure |
|
| >pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262 | Back alignment and structure |
|
| >pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279 | Back alignment and structure |
|
| >pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373 | Back alignment and structure |
|
| >pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329 | Back alignment and structure |
|
| >pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278 | Back alignment and structure |
|
| >pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299 | Back alignment and structure |
|
| >pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300 | Back alignment and structure |
|
| >pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333 | Back alignment and structure |
|
| >pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344 | Back alignment and structure |
|
| >pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324 | Back alignment and structure |
|
| >pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270 | Back alignment and structure |
|
| >pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297 | Back alignment and structure |
|
| >pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306 | Back alignment and structure |
|
| >pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318 | Back alignment and structure |
|
| >pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495 | Back alignment and structure |
|
| >pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286 | Back alignment and structure |
|
| >pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327 | Back alignment and structure |
|
| >pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317 | Back alignment and structure |
|
| >pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278 | Back alignment and structure |
|
| >pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352 | Back alignment and structure |
|
| >pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277 | Back alignment and structure |
|
| >pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537 | Back alignment and structure |
|
| >pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283 | Back alignment and structure |
|
| >pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284 | Back alignment and structure |
|
| >pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288 | Back alignment and structure |
|
| >pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273 | Back alignment and structure |
|
| >pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450 | Back alignment and structure |
|
| >pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263 | Back alignment and structure |
|
| >pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318 | Back alignment and structure |
|
| >pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307 | Back alignment and structure |
|
| >pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267 | Back alignment and structure |
|
| >pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283 | Back alignment and structure |
|
| >pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274 | Back alignment and structure |
|
| >pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | Back alignment and structure |
|
| >pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285 | Back alignment and structure |
|
| >pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285 | Back alignment and structure |
|
| >pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284 | Back alignment and structure |
|
| >pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292 | Back alignment and structure |
|
| >pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Apo) Length = 271 | Back alignment and structure |
|
| >pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281 | Back alignment and structure |
|
| >pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275 | Back alignment and structure |
|
| >pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282 | Back alignment and structure |
|
| >pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306 | Back alignment and structure |
|
| >pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307 | Back alignment and structure |
|
| >pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298 | Back alignment and structure |
|
| >pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284 | Back alignment and structure |
|
| >pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265 | Back alignment and structure |
|
| >pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284 | Back alignment and structure |
|
| >pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360 | Back alignment and structure |
|
| >pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286 | Back alignment and structure |
|
| >pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292 | Back alignment and structure |
|
| >pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297 | Back alignment and structure |
|
| >pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330 | Back alignment and structure |
|
| >pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301 | Back alignment and structure |
|
| >pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
| >pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321 | Back alignment and structure |
|
| >pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303 | Back alignment and structure |
|
| >pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331 | Back alignment and structure |
|
| >pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314 | Back alignment and structure |
|
| >pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311 | Back alignment and structure |
|
| >pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303 | Back alignment and structure |
|
| >pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301 | Back alignment and structure |
|
| >pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297 | Back alignment and structure |
|
| >pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292 | Back alignment and structure |
|
| >pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12 An 193189 Length = 337 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297 | Back alignment and structure |
|
| >pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346 | Back alignment and structure |
|
| >pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296 | Back alignment and structure |
|
| >pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423 | Back alignment and structure |
|
| >pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311 | Back alignment and structure |
|
| >pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound To Ldn- 193189 Length = 305 | Back alignment and structure |
|
| >pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349 | Back alignment and structure |
|
| >pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311 | Back alignment and structure |
|
| >pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476 | Back alignment and structure |
|
| >pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353 | Back alignment and structure |
|
| >pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299 | Back alignment and structure |
|
| >pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311 | Back alignment and structure |
|
| >pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311 | Back alignment and structure |
|
| >pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307 | Back alignment and structure |
|
| >pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311 | Back alignment and structure |
|
| >pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315 | Back alignment and structure |
|
| >pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311 | Back alignment and structure |
|
| >pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373 | Back alignment and structure |
|
| >pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674 | Back alignment and structure |
|
| >pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271 | Back alignment and structure |
|
| >pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314 | Back alignment and structure |
|
| >pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335 | Back alignment and structure |
|
| >pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295 | Back alignment and structure |
|
| >pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312 | Back alignment and structure |
|
| >pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293 | Back alignment and structure |
|
| >pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 233 bits (596), Expect = 2e-70
Identities = 104/334 (31%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 441 SKFLSDARYISQTMKLGALGLPAYRTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKN 500
SK+ I+ + L L +LEEATNNFD +G G G++Y+G L++
Sbjct: 3 SKYSKATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRD 62
Query: 501 GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFE 560
G VA++ + F IE +S RH HLVS +G C E I LI++
Sbjct: 63 GAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDE------RNEMI-LIYK 115
Query: 561 YVPNGTLRSWIS-EGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL 619
Y+ NG L+ + S++W QR+ IG A+G+ +LHT + ++K +ILL
Sbjct: 116 YMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILL 172
Query: 620 DQNLVAKISSYNLPLLAENAEKVGHVIPYS-------GSIDPTNSARGKLEEKIDIYDFG 672
D+N V KI+ + + ++ H+ S G IDP +G+L EK D+Y FG
Sbjct: 173 DENFVPKITDFGISKKGTELDQ-THL---STVVKGTLGYIDPEYFIKGRLTEKSDVYSFG 228
Query: 673 LILLEIIVGRP----LKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTM 728
++L E++ R R+ V+L + AV + + +VDP + ESL+
Sbjct: 229 VVLFEVLCARSAIVQSLPREMVNLAE---WAVESHNNGQLEQIVDPNLADKIRPESLRKF 285
Query: 729 MEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDA 762
+ V+CL + +RPS+ DVLW L++A ++Q++
Sbjct: 286 GDTAVKCLALSSEDRPSMGDVLWKLEYALRLQES 319
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 191 bits (487), Expect = 7e-55
Identities = 87/303 (28%), Positives = 150/303 (49%), Gaps = 34/303 (11%)
Query: 465 RTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCH-STRNFMHH 523
+ FSL EL+ A++NF +G G G++Y+GRL +GT VA++ LK ++ F
Sbjct: 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTE 77
Query: 524 IELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQS-LTW 582
+E+IS HR+L+ G C R+ L++ Y+ NG++ S + E Q L W
Sbjct: 78 VEMISMAVHRNLLRLRGFCMT------PTERL-LVYPYMANGSVASCLRERPESQPPLDW 130
Query: 583 TQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKV 642
+R A+G A+G+ +LH P + ++K +ILLD+ A + + L L + K
Sbjct: 131 PKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD--YKD 188
Query: 643 GHVIPYS-------GSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKN 695
HV + G I P + GK EK D++ +G++LLE+I G ++ DL +
Sbjct: 189 THV---TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITG-----QRAFDLARL 240
Query: 696 QLQAVVTADESAR--------RSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVE 747
V + + ++VD + DE ++ +++V + C +P ERP +
Sbjct: 241 ANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMS 300
Query: 748 DVL 750
+V+
Sbjct: 301 EVV 303
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 184 bits (469), Expect = 2e-52
Identities = 80/316 (25%), Positives = 128/316 (40%), Gaps = 42/316 (13%)
Query: 30 SSQAQTLLRIQGLLNNPAVLSSWNITTEFCNTEPTSSLT-VVCYEESITQLHIVGNKRAP 88
Q LL+I+ L NP LSSW TT+ CN + V+C ++ TQ + V
Sbjct: 5 PQDKQALLQIKKDLGNPTTLSSWLPTTDCCN----RTWLGVLC--DTDTQTYRV------ 52
Query: 89 MLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWG--PLSGKISRLSSLEILNMSS-NFLNG 145
L L L L P+ ++ L L L + N L G
Sbjct: 53 ---------------------NNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVG 91
Query: 146 AIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENL 205
IP ++ LT L L + ++G +PD+L + L L N +GTLP S S L NL
Sbjct: 92 PIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNL 151
Query: 206 RVLALSNNHFYGEVPD-FSGLTYL-QVLDLENNALGPQFPK-VGK-KLVTMILSKNKFRS 261
+ N G +PD + + L + + N L + P L + LS+N
Sbjct: 152 VGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEG 211
Query: 262 AIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPEL 321
S Q++ L+ N + + ++ L++ +N++ G L L+ L
Sbjct: 212 DASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFL 270
Query: 322 GFVDLSSNLLTGQLPN 337
+++S N L G++P
Sbjct: 271 HSLNVSFNNLCGEIPQ 286
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 128 bits (325), Expect = 6e-33
Identities = 58/219 (26%), Positives = 86/219 (39%), Gaps = 30/219 (13%)
Query: 128 SRLSS-LEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGR--VPDWLGSLPILAVL 184
+ LSS L + + G + + + L L L +P L +LP L L
Sbjct: 22 TTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFL 81
Query: 185 SLRN-NMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDF-SGLTYLQVLDLENNAL-GPQ 241
+ N G +P + + L L L +++ + G +PDF S + L LD NAL G
Sbjct: 82 YIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGT- 140
Query: 242 FPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPS-ITYL 300
+P +SS L + NR G P + S T +
Sbjct: 141 ---------------------LPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSM 179
Query: 301 NIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCL 339
I+ N+LTGK+ + N L FVDLS N+L G
Sbjct: 180 TISRNRLTGKIPPTFA-NLNLAFVDLSRNMLEGDASVLF 217
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 96.1 bits (240), Expect = 8e-22
Identities = 39/206 (18%), Positives = 71/206 (34%), Gaps = 33/206 (16%)
Query: 148 PQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRV 207
PQ+ L ++ + + L+ WL + N + G L D+ + +
Sbjct: 5 PQDKQALLQIKKDLGNPTTLS----SWLPTTD------CCNRTWLGVLCDTDTQTYRVNN 54
Query: 208 LALSNNHFYGEV---PDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIP 264
L LS + + L YL L + N IP
Sbjct: 55 LDLSGLNLPKPYPIPSSLANLPYLNFLYIGGI--------------------NNLVGPIP 94
Query: 265 AEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFV 324
++ QL L ++ G P L + ++ L+ + N L+G L +S P L +
Sbjct: 95 PAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGI 154
Query: 325 DLSSNLLTGQLPNCLLAGSKNRVVLY 350
N ++G +P+ + SK +
Sbjct: 155 TFDGNRISGAIPDSYGSFSKLFTSMT 180
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 190 bits (484), Expect = 6e-51
Identities = 83/353 (23%), Positives = 141/353 (39%), Gaps = 48/353 (13%)
Query: 31 SQAQTLLRIQGLLNNPAVLSSWNITTEFCNTEPTSSLTVVCYEESITQLHIVGNKRAPML 90
+ L+ + +L + +L W+ C + V C ++ +T + +
Sbjct: 12 REIHQLISFKDVLPDKNLLPDWSSNKNPCTFD-----GVTCRDDKVTSIDLSSK------ 60
Query: 91 PLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGP-------------------LSGKI---- 127
PL+ + ++L+ L L+ L L + + G LSG +
Sbjct: 61 PLNVGFSAVSSSLLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLT 120
Query: 128 --SRLSSLEILNMSSNFLNGAIPQELSI-LTSLQTLILDENMLAGRVPDWL---GSLPIL 181
S L+ LN+SSN L+ + L SL+ L L N ++G L
Sbjct: 121 SLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGEL 180
Query: 182 AVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQ 241
L++ N +G + S NL L +S+N+F +P + LQ LD+ N L
Sbjct: 181 KHLAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGD 238
Query: 242 FPK-VG--KKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALL-SLPSI 297
F + + +L + +S N+F IP LQ L L+ N+F G P L + ++
Sbjct: 239 FSRAISTCTELKLLNISSNQFVGPIPPLPLK--SLQYLSLAENKFTGEIPDFLSGACDTL 296
Query: 298 TYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLY 350
T L+++ N G + L + LSSN +G+LP L + VL
Sbjct: 297 TGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLD 349
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 184 bits (470), Expect = 4e-49
Identities = 73/243 (30%), Positives = 119/243 (48%), Gaps = 8/243 (3%)
Query: 105 KLPDLKVLRLVSLGLWGPL-SGKISRLSSLEILNMSSNFLNGAIPQELSILT-SLQTLIL 162
L+ L L S G L + ++ L++L++S N +G +P+ L+ L+ SL TL L
Sbjct: 316 SCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDL 375
Query: 163 DENMLAGRVPDWLG--SLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVP 220
N +G + L L L L+NN F G +P + S L L LS N+ G +P
Sbjct: 376 SSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIP 435
Query: 221 -DFSGLTYLQVLDLENNALGPQFPK---VGKKLVTMILSKNKFRSAIPAEVSSYYQLQRL 276
L+ L+ L L N L + P+ K L T+IL N IP+ +S+ L +
Sbjct: 436 SSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWI 495
Query: 277 DLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLP 336
LS+NR G P+ + L ++ L +++N +G + +L L ++DL++NL G +P
Sbjct: 496 SLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 555
Query: 337 NCL 339
+
Sbjct: 556 AAM 558
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 180 bits (460), Expect = 9e-48
Identities = 73/238 (30%), Positives = 100/238 (42%), Gaps = 4/238 (1%)
Query: 102 TLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLI 161
TL +L L L L G + + LS L L + N L G IPQEL + +L+TLI
Sbjct: 413 TLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLI 472
Query: 162 LDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD 221
LD N L G +P L + L +SL NN G +P LENL +L LSNN F G +P
Sbjct: 473 LDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPA 532
Query: 222 -FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSS 280
L LDL N P K ++ N + + + +
Sbjct: 533 ELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGK-IAANFIAGKRYVYIKNDGMKKECHGAG 591
Query: 281 N--RFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLP 336
N F G + L L + NI G N + F+D+S N+L+G +P
Sbjct: 592 NLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIP 649
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 179 bits (456), Expect = 3e-47
Identities = 76/241 (31%), Positives = 105/241 (43%), Gaps = 12/241 (4%)
Query: 107 PDLKVLRLVSLGLWGPLSGKISR--LSSLEILNMSSNFLNGAIPQELSILTSLQTLILDE 164
L L L S GP+ + + ++L+ L + +N G IP LS + L +L L
Sbjct: 368 ASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSF 427
Query: 165 NMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FS 223
N L+G +P LGSL L L L NM G +P Y++ L L L N GE+P S
Sbjct: 428 NYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLS 487
Query: 224 GLTYLQVLDLENNALGPQFPK---VGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSS 280
T L + L NN L + PK + L + LS N F IPAE+ L LDL++
Sbjct: 488 NCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNT 547
Query: 281 NRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNL--LTGQLPNC 338
N F G P A+ IA N + GK + + + + NL G
Sbjct: 548 NLFNGTIPAAMFKQS----GKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQ 603
Query: 339 L 339
L
Sbjct: 604 L 604
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 166 bits (423), Expect = 5e-43
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 10/244 (4%)
Query: 102 TLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLI 161
L+ + L+ L L L G + +S ++L +++S+N L G IP+ + L +L L
Sbjct: 461 ELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILK 520
Query: 162 LDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVP- 220
L N +G +P LG L L L N+FNGT+P + ++ N G+
Sbjct: 521 LSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGK----IAANFIAGKRYV 576
Query: 221 DFSGLTYLQVLDLENNAL---GPQFPKVGK--KLVTMILSKNKFRSAIPAEVSSYYQLQR 275
+ N L G + ++ + ++ + + +
Sbjct: 577 YIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMF 636
Query: 276 LDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQL 335
LD+S N G P+ + S+P + LN+ N ++G + D++ L +DLSSN L G++
Sbjct: 637 LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRI 696
Query: 336 PNCL 339
P +
Sbjct: 697 PQAM 700
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 158 bits (402), Expect = 2e-40
Identities = 60/242 (24%), Positives = 97/242 (40%), Gaps = 10/242 (4%)
Query: 102 TLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLI 161
L +L + L + L G + I RL +L IL +S+N +G IP EL SL L
Sbjct: 485 GLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLD 544
Query: 162 LDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNN--HFYGEV 219
L+ N+ G +P + + N G + + N F G
Sbjct: 545 LNTNLFNGTIPAAMFKQS----GKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIR 600
Query: 220 P-DFSGLTYLQVLDLENNALGPQFPKVGKKLVTMI---LSKNKFRSAIPAEVSSYYQLQR 275
+ L+ ++ + G +M+ +S N IP E+ S L
Sbjct: 601 SEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFI 660
Query: 276 LDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQL 335
L+L N G P + L + L+++ NKL G++ +S L +DLS+N L+G +
Sbjct: 661 LNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPI 720
Query: 336 PN 337
P
Sbjct: 721 PE 722
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 1e-23
Identities = 41/134 (30%), Positives = 62/134 (46%)
Query: 103 LVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLIL 162
L +L + S G S S+ L+MS N L+G IP+E+ + L L L
Sbjct: 604 LNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNL 663
Query: 163 DENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDF 222
N ++G +PD +G L L +L L +N +G +P + S L L + LSNN+ G +P+
Sbjct: 664 GHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM 723
Query: 223 SGLTYLQVLDLENN 236
NN
Sbjct: 724 GQFETFPPAKFLNN 737
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 57.6 bits (140), Expect = 1e-08
Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 3/100 (3%)
Query: 257 NKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKL--FDD 314
N SA+ + + S L+ L LS++ G S+T L+++ N L+G +
Sbjct: 63 NVGFSAVSSSLLSLTGLESLFLSNSHINGSVSG-FKCSASLTSLDLSRNSLSGPVTTLTS 121
Query: 315 LSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNC 354
L L F+++SSN L + VL
Sbjct: 122 LGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSAN 161
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 175 bits (447), Expect = 2e-49
Identities = 92/320 (28%), Positives = 139/320 (43%), Gaps = 58/320 (18%)
Query: 465 RTFSLEELEEATNNFDTSA------FMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHST- 517
+FS EL+ TNNFD MGEG G +Y+G + N T VA++ L +T
Sbjct: 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTE 71
Query: 518 ---RNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEG 574
+ F I++++K +H +LV LG + D L++ Y+PNG+L +S
Sbjct: 72 ELKQQFDQEIKVMAKCQHENLVELLGFSSD---GDD---LC-LVYVYMPNGSLLDRLSCL 124
Query: 575 HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSN---NLKITDILLDQNLVAKISSYN 631
L+W R A G A GI FLH + ++K +ILLD+ AKIS +
Sbjct: 125 DGTPPLSWHMRCKIAQGAANGINFLHEN------HHIHRDIKSANILLDEAFTAKISDFG 178
Query: 632 LPLLAENAEK----------VGHVIP-YSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV 680
L +E + ++ P RG++ K DIY FG++LLEII
Sbjct: 179 LARASEKFAQTVMTSRIVGTTAYMAPEAL---------RGEITPKSDIYSFGVVLLEIIT 229
Query: 681 GRPL--KSRKEVDLL---KNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRC 735
G P + R+ LL + +E +D +N A M V +C
Sbjct: 230 GLPAVDEHREPQLLLDIKEEIED-----EEKTIEDYIDKKMNDADSTSVEA-MYSVASQC 283
Query: 736 LLKNPAERPSVEDVLWNLQF 755
L + +RP ++ V LQ
Sbjct: 284 LHEKKNKRPDIKKVQQLLQE 303
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 149 bits (378), Expect = 4e-40
Identities = 50/318 (15%), Positives = 109/318 (34%), Gaps = 33/318 (10%)
Query: 467 FSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIEL 526
E L + G G +++ +L +VA++ ++ S + + +
Sbjct: 14 LGTENLYFQSMPLQLLEVKARGRFGCVWKAQL-LNEYVAVKIFPIQDKQSWQ-NEYEVYS 71
Query: 527 ISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRI 586
+ ++H +++ +G S ++LI + G+L ++ ++W +
Sbjct: 72 LPGMKHENILQFIGAEKR---GTSVDVDLWLITAFHEKGSLSDFLK----ANVVSWNELC 124
Query: 587 SAAIGVAKGIQFLHTGIVPGVFSNNLKI-------TDILLDQNLVAKISSYNLPLLAENA 639
A +A+G+ +LH I + I ++LL NL A I+ + L L E
Sbjct: 125 HIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAG 184
Query: 640 EKVGHVIPYSGS--------IDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVD 691
+ G G+ ++ + + +ID+Y GL+L E+ + VD
Sbjct: 185 KSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTA-ADGPVD 243
Query: 692 LLKNQLQAVVTADESAR-------RSMVDPAVNKACL-DESLKTMMEVCVRCLLKNPAER 743
+ + S P + + + E C + R
Sbjct: 244 EYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEAR 303
Query: 744 PSVEDVLWNLQFAAQVQD 761
S V + ++ +
Sbjct: 304 LSAGCVGERITQMQRLTN 321
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 140 bits (355), Expect = 9e-35
Identities = 55/252 (21%), Positives = 84/252 (33%), Gaps = 11/252 (4%)
Query: 102 TLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLI 161
KLP LKVL L L + ++L L++ SN + +L TL
Sbjct: 68 LCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLD 127
Query: 162 LDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLEN--LRVLALSNNHFYGEV 219
L N L+ L L L L NN + N L+ L LS+N
Sbjct: 128 LSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFS 187
Query: 220 PD-FSGLTYLQVLDLENNALGPQFPKV------GKKLVTMILSKNKFRSAIPAEVSS--Y 270
P F + L L L N LGP + + + LS ++ + +
Sbjct: 188 PGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKW 247
Query: 271 YQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNL 330
L LDLS N + LP + Y + N + L + +++L +
Sbjct: 248 TNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSF 307
Query: 331 LTGQLPNCLLAG 342
+ L
Sbjct: 308 TKQSISLASLPK 319
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 139 bits (353), Expect = 2e-34
Identities = 57/249 (22%), Positives = 89/249 (35%), Gaps = 17/249 (6%)
Query: 106 LPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIP-QELSILTSLQTLILDE 164
L +L L + S S L LE+L++ N + + QE L ++ + L
Sbjct: 380 HSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSY 439
Query: 165 NMLAGRVPDWLGSLPILAVLSLRNNMFNG--TLPDSFSYLENLRVLALSNNHFYGEVPD- 221
N + +P L L LR + P F L NL +L LSNN+ D
Sbjct: 440 NKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDM 499
Query: 222 FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSN 281
GL L++LDL++N L L K+ + L L+L SN
Sbjct: 500 LEGLEKLEILDLQHNNLA-------------RLWKHANPGGPIYFLKGLSHLHILNLESN 546
Query: 282 RFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLA 341
F + L + +++ N L + L ++L NL+T
Sbjct: 547 GFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGP 606
Query: 342 GSKNRVVLY 350
+N L
Sbjct: 607 AFRNLTELD 615
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 135 bits (341), Expect = 5e-33
Identities = 55/277 (19%), Positives = 103/277 (37%), Gaps = 12/277 (4%)
Query: 101 TTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTL 160
+ L L + + +L L++LN+ N L+ + + T+L L
Sbjct: 43 ANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTEL 102
Query: 161 ILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYG--- 217
L N + + L L L +N + T + LENL+ L LSNN
Sbjct: 103 HLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKS 162
Query: 218 EVPDFSGLTYLQVLDLENNAL---GPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYY--- 271
E D + L+ L+L +N + P +L + L+ + ++ ++
Sbjct: 163 EELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANT 222
Query: 272 QLQRLDLSSNRFVGPFPQAL--LSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSN 329
++ L LS+++ L ++T L+++ N L D + P+L + L N
Sbjct: 223 SIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYN 282
Query: 330 LLTGQLPNCLLAGSKNRVVLYARNCLAAGNENQHPLS 366
+ L + L G N L + + + L
Sbjct: 283 NIQH-LFSHSLHGLFNVRYLNLKRSFTKQSISLASLP 318
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 8e-32
Identities = 49/217 (22%), Positives = 97/217 (44%), Gaps = 9/217 (4%)
Query: 130 LSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNN 189
+++ +LN++ N L + + L +L + N ++ P+ LP+L VL+L++N
Sbjct: 24 PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN 83
Query: 190 MFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNAL-GPQFPKVG- 246
+ +F++ NL L L +N + F L LDL +N L +
Sbjct: 84 ELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQ 143
Query: 247 -KKLVTMILSKNKFRSAIPAEVS--SYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIA 303
+ L ++LS NK ++ E+ + L++L+LSSN+ P ++ + L +
Sbjct: 144 LENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLN 203
Query: 304 DNKLTGKLFDDLS---CNPELGFVDLSSNLLTGQLPN 337
+ +L L + L N + + LS++ L+
Sbjct: 204 NVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNT 240
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 126 bits (318), Expect = 4e-30
Identities = 55/306 (17%), Positives = 105/306 (34%), Gaps = 28/306 (9%)
Query: 60 NTEPTSSLTVVCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGL 119
T L + SI L + ++ + +F +K +L +L L L
Sbjct: 208 GPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFL-------GLKWTNLTMLDLSYNNL 260
Query: 120 WGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRV-------- 171
+ + L LE + N + L L +++ L L + +
Sbjct: 261 NVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKI 320
Query: 172 -PDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD---FSGL-- 225
L L L++ +N G + F+ L NL+ L+LSN+ F L
Sbjct: 321 DDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAH 380
Query: 226 TYLQVLDLENNAL---GPQFPKVGKKLVTMILSKNKFRSAIPAEV-SSYYQLQRLDLSSN 281
+ L +L+L N + L + L N+ + + + + LS N
Sbjct: 381 SPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYN 440
Query: 282 RFVGPFPQALLSLPSITYLNIADNKLTG--KLFDDLSCNPELGFVDLSSNLLTGQLPNCL 339
+++ + +PS+ L + L L +DLS+N + + + +
Sbjct: 441 KYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIAN-INDDM 499
Query: 340 LAGSKN 345
L G +
Sbjct: 500 LEGLEK 505
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 123 bits (312), Expect = 2e-29
Identities = 49/224 (21%), Positives = 86/224 (38%), Gaps = 16/224 (7%)
Query: 102 TLVKLPDLKVLRLVSLGLWGPLSGK-ISRLSSLEILNMSSNFLNGAIPQELSILTSLQTL 160
L L+VL L + L+G+ L ++ + +S N +++ SLQ L
Sbjct: 400 AFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRL 459
Query: 161 ILDENMLAG--RVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHF--- 215
+L L P L L +L L NN D LE L +L L +N+
Sbjct: 460 MLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARL 519
Query: 216 ------YGEVPDFSGLTYLQVLDLENNAL---GPQFPKVGKKLVTMILSKNKFRSAIPAE 266
G + GL++L +L+LE+N + K +L + L N + +
Sbjct: 520 WKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASV 579
Query: 267 VSSYYQLQRLDLSSNRFVGPFPQALL-SLPSITYLNIADNKLTG 309
++ L+ L+L N + + ++T L++ N
Sbjct: 580 FNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDC 623
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 2e-28
Identities = 49/221 (22%), Positives = 79/221 (35%), Gaps = 9/221 (4%)
Query: 132 SLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMF 191
S E+ + S L +P + + T++ L L N L L L + N
Sbjct: 5 SHEVADCSHLKLT-QVPDD--LPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTI 61
Query: 192 NGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKV---GK 247
+ P+ L L+VL L +N F+ T L L L +N++ K
Sbjct: 62 SKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQK 121
Query: 248 KLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQAL--LSLPSITYLNIADN 305
L+T+ LS N S LQ L LS+N+ + L + S+ L ++ N
Sbjct: 122 NLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSN 181
Query: 306 KLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNR 346
++ L + L++ L L L N
Sbjct: 182 QIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANT 222
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 7e-27
Identities = 50/272 (18%), Positives = 93/272 (34%), Gaps = 53/272 (19%)
Query: 91 PLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKIS--RLSSLEILNMSSNFLNGAIP 148
L S+ + + ++ L L + L + + ++L +L++S N LN
Sbjct: 206 QLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGN 265
Query: 149 QELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTL---------PDSF 199
+ L L+ L+ N + L L + L+L+ + ++ SF
Sbjct: 266 DSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSF 325
Query: 200 SYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNK 258
+L+ L L + +N G + F+GL L+ L L N+ + L+
Sbjct: 326 QWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLR-----------TLTNET 374
Query: 259 FRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCN 318
F S ++ L L+L+ N+ A L + L
Sbjct: 375 FVS------LAHSPLHILNLTKNKISKIESDAFSWLGHLEVL------------------ 410
Query: 319 PELGFVDLSSNLLTGQLPNCLLAGSKNRVVLY 350
DL N + +L G +N +Y
Sbjct: 411 ------DLGLNEIGQELTGQEWRGLENIFEIY 436
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 85.8 bits (213), Expect = 2e-17
Identities = 34/154 (22%), Positives = 53/154 (34%), Gaps = 10/154 (6%)
Query: 95 SMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLN--------GA 146
++DS + L +L +L L + + + L LEIL++ N L G
Sbjct: 468 NVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGG 527
Query: 147 IPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLR 206
L L+ L L L+ N + L L ++ L N N F+ +L+
Sbjct: 528 PIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLK 587
Query: 207 VLALSNNHFYGEVPDF--SGLTYLQVLDLENNAL 238
L L N L LD+ N
Sbjct: 588 SLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPF 621
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 75.0 bits (185), Expect = 4e-14
Identities = 33/152 (21%), Positives = 52/152 (34%), Gaps = 15/152 (9%)
Query: 102 TLVKLPDLKVL--------RLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSI 153
L L L++L RL G + LS L ILN+ SN + +
Sbjct: 499 MLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKD 558
Query: 154 LTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSY-LENLRVLALSN 212
L L+ + L N L + L L+L+ N+ F NL L +
Sbjct: 559 LFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRF 618
Query: 213 NHFYGEVPDFSGL------TYLQVLDLENNAL 238
N F + T+ + +L ++ L
Sbjct: 619 NPFDCTCESIAWFVNWINETHTNIPELSSHYL 650
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 135 bits (343), Expect = 1e-33
Identities = 55/289 (19%), Positives = 88/289 (30%), Gaps = 30/289 (10%)
Query: 92 LSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLN------- 144
L + +D + L ++ LVS+ + S + L + +
Sbjct: 267 LDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKD--FSYNFGWQHLELVNCKFGQFPTLKL 324
Query: 145 ------------GAIPQELSILTSLQTLILDENMLA--GRVPDWLGSLPILAVLSLRNNM 190
G L SL+ L L N L+ G L L L N
Sbjct: 325 KSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNG 384
Query: 191 FNGTLPDSFSYLENLRVLALSNNHFYGEVPD--FSGLTYLQVLDLENN---ALGPQFPKV 245
T+ +F LE L L +++ F L L LD+ +
Sbjct: 385 VI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNG 443
Query: 246 GKKLVTMILSKNKFRSAIPAEV-SSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIAD 304
L + ++ N F+ ++ + L LDLS + P A SL S+ LN++
Sbjct: 444 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSH 503
Query: 305 NKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARN 353
N C L +D S N + L + L
Sbjct: 504 NNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQ 552
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 7e-28
Identities = 45/239 (18%), Positives = 80/239 (33%), Gaps = 14/239 (5%)
Query: 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENM 166
K L L L S L++L++S + L+ L TLIL N
Sbjct: 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87
Query: 167 LAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHF-YGEVPD-FSG 224
+ L L L +L+ L+ L +++N ++P+ FS
Sbjct: 88 IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSN 147
Query: 225 LTYLQVLDLENNALG-------PQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLD 277
LT L+ LDL +N + ++ +++ LS N I +L +L
Sbjct: 148 LTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNF-IQPGAFKEIRLHKLT 206
Query: 278 LSSNRFVGPFPQ-ALLSLPSITYLNIADNKLTGK---LFDDLSCNPELGFVDLSSNLLT 332
L +N + + L + + + + D S L + + L
Sbjct: 207 LRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLA 265
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 1e-27
Identities = 58/258 (22%), Positives = 88/258 (34%), Gaps = 18/258 (6%)
Query: 101 TTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTL 160
+ P+L+VL L + G LS L L ++ N + S L+SLQ L
Sbjct: 46 YSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKL 105
Query: 161 ILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGT-LPDSFSYLENLRVLALSNNHFYGEV 219
+ E LA +G L L L++ +N+ LP+ FS L NL L LS+N
Sbjct: 106 VAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIY 165
Query: 220 P-DFSGLTYLQV----LDLENNALGPQFPKVGK--KLVTMILSKNKFRSAIPAEV-SSYY 271
D L + + LDL N + P K +L + L N +
Sbjct: 166 CTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLA 225
Query: 272 QLQRLDLSSNRFVGPFPQALLS---LPSITYLNIADNKLT------GKLFDDLSCNPELG 322
L+ L F L + L I + +L + D +C +
Sbjct: 226 GLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVS 285
Query: 323 FVDLSSNLLTGQLPNCLL 340
L S +
Sbjct: 286 SFSLVSVTIERVKDFSYN 303
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 7e-27
Identities = 56/253 (22%), Positives = 86/253 (33%), Gaps = 14/253 (5%)
Query: 130 LSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNN 189
+ ++ M NF IP L S + L L N L S P L VL L
Sbjct: 7 VPNITYQCMELNFY--KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRC 62
Query: 190 MFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNAL-GPQFPKVG- 246
++ L +L L L+ N FSGL+ LQ L L + +G
Sbjct: 63 EIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGH 122
Query: 247 -KKLVTMILSKNKFRSA-IPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITY----L 300
K L + ++ N +S +P S+ L+ LDLSSN+ + L L + L
Sbjct: 123 LKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSL 182
Query: 301 NIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAAGNE 360
+++ N + L + L +N + + + G V
Sbjct: 183 DLSLNPMNFIQPGAFK-EIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEG 241
Query: 361 NQHPLSFCQNEAL 373
N E L
Sbjct: 242 NLEKFDKSALEGL 254
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 1e-26
Identities = 46/191 (24%), Positives = 66/191 (34%), Gaps = 8/191 (4%)
Query: 102 TLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQE-LSILTSLQTL 160
+ LK L L G+ +S L LE L+ + L L +L L
Sbjct: 368 SDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYL 426
Query: 161 ILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTL-PDSFSYLENLRVLALSNNHFYGEV 219
+ L L VL + N F PD F+ L NL L LS
Sbjct: 427 DISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLS 486
Query: 220 PD-FSGLTYLQVLDLENNALGPQFPKVG---KKLVTMILSKNKFRSAIPAEVSS-YYQLQ 274
P F+ L+ LQVL++ +N L + S N ++ E+ L
Sbjct: 487 PTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLA 546
Query: 275 RLDLSSNRFVG 285
L+L+ N F
Sbjct: 547 FLNLTQNDFAC 557
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 1e-26
Identities = 48/285 (16%), Positives = 83/285 (29%), Gaps = 35/285 (12%)
Query: 75 SITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGL-WGPLSGKISRLSSL 133
+ +V + L S + L L ++ RL L + + L+++
Sbjct: 226 GLEVHRLVLGEFRNEGNLEKFDKSALEGLCNL-TIEEFRLAYLDYYLDDIIDLFNCLTNV 284
Query: 134 EILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNG 193
++ S + S Q L L +L + ++ L G
Sbjct: 285 SSFSLVSVTIERVKD--FSYNFGWQHLELVNCKFGQ-----FPTLKLKSLKRLTFTSNKG 337
Query: 194 TLPDSFSYLENLRVLALSNNH--FYGEVPD-FSGLTYLQVLDLENNALGPQFPKVGKKLV 250
S L +L L LS N F G G T L+ LDL N +
Sbjct: 338 GNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGV------------ 385
Query: 251 TMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQ-ALLSLPSITYLNIADNKLTG 309
+ + QL+ LD + LSL ++ YL+I+
Sbjct: 386 ----------ITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRV 435
Query: 310 KLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNC 354
+ L + ++ N + +N L C
Sbjct: 436 AFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQC 480
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 136 bits (344), Expect = 2e-33
Identities = 40/252 (15%), Positives = 84/252 (33%), Gaps = 22/252 (8%)
Query: 109 LKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENML- 167
+ + K L L + + + +P L L +Q + + N
Sbjct: 227 WENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGI 286
Query: 168 -------AGRVPDWLGSLPILAVLSLRNNMF-NGTLPDSFSYLENLRVLALSNNHFYGEV 219
+ + ++ + N + S ++ L +L N G++
Sbjct: 287 SGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGKL 346
Query: 220 PDFSGLTYLQVLDLENNALG---PQFPKVGKKLVTMILSKNKFRSAIPA--EVSSYYQLQ 274
P F L L+L N + F +++ + + NK IP + S +
Sbjct: 347 PAFGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKL-KYIPNIFDAKSVSVMS 405
Query: 275 RLDLSSNRFVG-------PFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLS 327
+D S N P +++ +N+++N+++ + S L ++L
Sbjct: 406 AIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLM 465
Query: 328 SNLLTGQLPNCL 339
N+LT N L
Sbjct: 466 GNMLTEIPKNSL 477
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 1e-30
Identities = 44/254 (17%), Positives = 85/254 (33%), Gaps = 32/254 (12%)
Query: 127 ISRLSSLEILNMSSNFLNGAIPQELSI--LTSLQTLILDENMLAGRVPDWLGSLPI---- 180
+E L+ + N L IP ++ + + N + L
Sbjct: 373 CGFTEQVENLSFAHNKLKY-IPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFK 431
Query: 181 ---LAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHF--------YGEVPDFSGLTYLQ 229
++ ++L NN + + FS L + L N E +F L
Sbjct: 432 GINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLT 491
Query: 230 VLDLENNALG--PQFPKVGK--KLVTMILSKNKFRSAIPAEVSSYYQLQRL------DLS 279
+DL N L + LV + LS N F P + + L+ D
Sbjct: 492 SIDLRFNKLTKLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQ 550
Query: 280 SNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCL 339
NR + +P+ + PS+T L I N + + + ++ P + +D+ N + +
Sbjct: 551 GNRTLREWPEGITLCPSLTQLQIGSNDIRK-VNEKIT--PNISVLDIKDNPNISIDLSYV 607
Query: 340 LAGSKNRVVLYARN 353
+ + + +
Sbjct: 608 CPYIEAGMYMLFYD 621
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 3e-29
Identities = 43/251 (17%), Positives = 80/251 (31%), Gaps = 36/251 (14%)
Query: 105 KLPDLKVLRL-------VSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSL 157
+ + + V + PL + ++ +N+S+N ++ + S + L
Sbjct: 400 SVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPL 459
Query: 158 QTLILDENMLAG-------RVPDWLGSLPILAVLSLRNNMFNGTLPDSFSY--LENLRVL 208
++ L NML + + +L + LR N L D F L L +
Sbjct: 460 SSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLTK-LSDDFRATTLPYLVGI 518
Query: 209 ALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVS 268
LS N F + L+ + N N+ P ++
Sbjct: 519 DLSYNSFSKFPTQPLNSSTLKGFGIRNQ---------------RDAQGNRTLREWPEGIT 563
Query: 269 SYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSS 328
L +L + SN + + P+I+ L+I DN + E G L
Sbjct: 564 LCPSLTQLQIGSNDIRK-VNEKI--TPNISVLDIKDNPNISIDLSYVCPYIEAGMYMLFY 620
Query: 329 NLLTGQLPNCL 339
+ + C
Sbjct: 621 DKTQ-DIRGCD 630
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 119 bits (301), Expect = 3e-28
Identities = 34/246 (13%), Positives = 77/246 (31%), Gaps = 17/246 (6%)
Query: 109 LKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNG----AIPQELSILTSLQTLILDE 164
+ L L G G + I +L+ LE+L + S+ P+ +S S +
Sbjct: 83 VTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMR 142
Query: 165 NMLAGRVPDWLG--SLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDF 222
D+ L + ++ ++ S + +N+
Sbjct: 143 MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITFVSKAV 202
Query: 223 SGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNR 282
LT L+ + N+ + + + + + L +++ +
Sbjct: 203 MRLTKLRQFYMGNSPFVAENICEAWENEN--SEYAQQYKTEDLKWDNLKDLTDVEVYNCP 260
Query: 283 FVGPFPQALLSLPSITYLNIADNKLT--------GKLFDDLSCNPELGFVDLSSN-LLTG 333
+ P L +LP + +N+A N+ + D ++ + + N L T
Sbjct: 261 NLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTF 320
Query: 334 QLPNCL 339
+ L
Sbjct: 321 PVETSL 326
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 9e-07
Identities = 22/170 (12%), Positives = 47/170 (27%), Gaps = 8/170 (4%)
Query: 193 GTLPDSFSYLENLRVLALSNNHFYGEV-PDFSGLTYLQVLDLENNALGPQFPKVGKKLVT 251
+ D + E L N G + + + LD+ G G+ +
Sbjct: 27 EYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSNGR-VTG 85
Query: 252 MILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGP----FPQALLSLPSITYLNIADNKL 307
+ L +P + +L+ L L S+ P+ + + S
Sbjct: 86 LSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHY 145
Query: 308 TGKLFDDLSCN--PELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCL 355
D +L ++S+ + K+ + N +
Sbjct: 146 QKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNI 195
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 3e-06
Identities = 12/89 (13%), Positives = 27/89 (30%), Gaps = 3/89 (3%)
Query: 101 TTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTL 160
+TL I+ SL L + SN + + ++ I ++ L
Sbjct: 536 STLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDIRK-VNEK--ITPNISVL 592
Query: 161 ILDENMLAGRVPDWLGSLPILAVLSLRNN 189
+ +N ++ + L +
Sbjct: 593 DIKDNPNISIDLSYVCPYIEAGMYMLFYD 621
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 1e-31
Identities = 46/263 (17%), Positives = 86/263 (32%), Gaps = 25/263 (9%)
Query: 101 TTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTL 160
T D + + S L L + + + +P L L LQ+L
Sbjct: 461 TYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSL 520
Query: 161 ILDENMLAG---------RVPDWLGSLPILAVLSLRNNMFNGTLPDS--FSYLENLRVLA 209
+ N R+ D + P + + + N P S + L +L
Sbjct: 521 NIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEE-FPASASLQKMVKLGLLD 579
Query: 210 LSNNHFYGEVPDFSGLTYLQVLDLENNALG---PQFPKVGKKLVTMILSKNKFRSAIP-- 264
+N + F L L L+ N + F ++ + S NK IP
Sbjct: 580 CVHNKV-RHLEAFGTNVKLTDLKLDYNQIEEIPEDFCAFTDQVEGLGFSHNKL-KYIPNI 637
Query: 265 AEVSSYYQLQRLDLSSNRFVGPFPQALLSLP-----SITYLNIADNKLTGKLFDDLSCNP 319
S Y + +D S N+ S+ + + + ++ N++ + +
Sbjct: 638 FNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGS 697
Query: 320 ELGFVDLSSNLLTGQLPNCLLAG 342
+ + LS+NL+T +P L
Sbjct: 698 PISTIILSNNLMT-SIPENSLKP 719
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 118 bits (296), Expect = 2e-27
Identities = 46/285 (16%), Positives = 87/285 (30%), Gaps = 30/285 (10%)
Query: 75 SITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWG------PLSGKIS 128
++ + ++R + L + + + + L + +S I
Sbjct: 386 HYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQ 445
Query: 129 RLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRN 188
RL+ L+I+ +++ + D +L L + L N
Sbjct: 446 RLTKLQIIYFANSPFTYDNIA-----VDWEDANSDYAKQYENEELSWSNLKDLTDVELYN 500
Query: 189 NMFNGTLPDSFSYLENLRVLALSNNHFYGEV----------PDFSGLTYLQVLDLENNAL 238
LPD L L+ L ++ N D +Q+ + N L
Sbjct: 501 CPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNL 560
Query: 239 G--PQFPKVGK--KLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSL 294
P + K KL + NK R + + +L L L N+
Sbjct: 561 EEFPASASLQKMVKLGLLDCVHNKVRH-LE-AFGTNVKLTDLKLDYNQIEEIPEDFCAFT 618
Query: 295 PSITYLNIADNKLTGKLFDDLSCN--PELGFVDLSSNLLTGQLPN 337
+ L + NKL + + + +G VD S N + + N
Sbjct: 619 DQVEGLGFSHNKLKY-IPNIFNAKSVYVMGSVDFSYNKIGSEGRN 662
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 2e-26
Identities = 41/242 (16%), Positives = 83/242 (34%), Gaps = 34/242 (14%)
Query: 127 ISRLSSLEILNMSSNFLNGAIPQEL-SILTSLQTLILDENMLAGRVPDW--LGSLPILAV 183
L L + N + IP++ + ++ L N L +P+ S+ ++
Sbjct: 591 FGTNVKLTDLKLDYNQIEE-IPEDFCAFTDQVEGLGFSHNKLKY-IPNIFNAKSVYVMGS 648
Query: 184 LSLRNNMFNGTLPDSFSYLE-----NLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNA 237
+ N + ++ N + LS N + F+ + + + L NN
Sbjct: 649 VDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNL 708
Query: 238 LGPQFPKVG-----------KKLVTMILSKNKFRSAIPAE--VSSYYQLQRLDLSSNRFV 284
+ P+ L T+ L NK S + + ++ L +D+S N F
Sbjct: 709 MT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLTS-LSDDFRATTLPYLSNMDVSYNCFS 766
Query: 285 GPFPQALLSLPSITYLNI------ADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNC 338
FP L+ + I N++ + ++ P L + + SN + +
Sbjct: 767 S-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDIRK-VDEK 824
Query: 339 LL 340
L
Sbjct: 825 LT 826
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 3e-25
Identities = 44/262 (16%), Positives = 81/262 (30%), Gaps = 21/262 (8%)
Query: 109 LKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIP-------QELSILTSLQTLI 161
+ L L G G + I +L+ L++L+ ++ + +
Sbjct: 325 VTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIR 384
Query: 162 LDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD 221
+ + L +L RN DS L++ ++ L+N +
Sbjct: 385 MHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRI--TFISK 442
Query: 222 -FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSS 280
LT LQ++ N+ V K S+ L ++L +
Sbjct: 443 AIQRLTKLQIIYFANSPFTYDNIAVD--WEDANSDYAKQYENEELSWSNLKDLTDVELYN 500
Query: 281 NRFVGPFPQALLSLPSITYLNIADNKLTG---------KLFDDLSCNPELGFVDLSSNLL 331
+ P L LP + LNIA N+ +L DD P++ + N L
Sbjct: 501 CPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNL 560
Query: 332 TGQLPNCLLAGSKNRVVLYARN 353
+ L +L +
Sbjct: 561 EEFPASASLQKMVKLGLLDCVH 582
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 108 bits (270), Expect = 3e-24
Identities = 46/324 (14%), Positives = 96/324 (29%), Gaps = 43/324 (13%)
Query: 40 QGLLNNPAVLSSWNITTEFCNTEPTSSLTVVCYEES-ITQLHIVGNKRAPMLPLSFSMDS 98
G +NN +WN E V +T L + G +P +
Sbjct: 290 SGTINNTIHSLNWNFNKELDM--WGDQPGVDLDNNGRVTGLSLAGFGAKGRVPDAIG--- 344
Query: 99 FVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQE-LSILTSL 157
+L +LKVL + + ++ + + + L L
Sbjct: 345 ------QLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRL 398
Query: 158 QTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNG------TLPDSFSYLENLRVLALS 211
L ++ + R P+ + + + +SL++ + + L L+++ +
Sbjct: 399 NLSDLLQDAIN-RNPE-MKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFA 456
Query: 212 NNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVG---KKLVTMILSKNKFRSAIPAEVS 268
N+ F + + + + K L + L + +P +
Sbjct: 457 NSPFTYDNI----AVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLY 512
Query: 269 SYYQLQRLDLSSNRFVGP---------FPQALLSLPSITYLNIADNKLTG-KLFDDLSCN 318
+LQ L+++ NR + + P I + N L L
Sbjct: 513 DLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQKM 572
Query: 319 PELGFVDLSSNLLT-----GQLPN 337
+LG +D N + G
Sbjct: 573 VKLGLLDCVHNKVRHLEAFGTNVK 596
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 2e-23
Identities = 37/241 (15%), Positives = 76/241 (31%), Gaps = 33/241 (13%)
Query: 103 LVKLPDLKVL-----RLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSL 157
+ + + ++ S G S + + + +S N + + + + +
Sbjct: 640 AKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPI 699
Query: 158 QTLILDENML-------AGRVPDWLGSLPILAVLSLRNNMFNGTLPDS--FSYLENLRVL 208
T+IL N++ + +L + LR N +L D + L L +
Sbjct: 700 STIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNM 758
Query: 209 ALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVS 268
+S N F + L+ + + N+ P ++
Sbjct: 759 DVSYNCFSSFPTQPLNSSQLKAFGIRHQ---------------RDAEGNRILRQWPTGIT 803
Query: 269 SYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSS 328
+ L +L + SN + L P + L+IADN + E G L
Sbjct: 804 TCPSLIQLQIGSNDIRK-VDEKL--TPQLYILDIADNPNISIDVTSVCPYIEAGMYVLLY 860
Query: 329 N 329
+
Sbjct: 861 D 861
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 47.2 bits (112), Expect = 2e-05
Identities = 11/96 (11%), Positives = 24/96 (25%)
Query: 272 QLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLL 331
++ L L+ G P A+ L + L+ + T + + +
Sbjct: 324 RVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRI 383
Query: 332 TGQLPNCLLAGSKNRVVLYARNCLAAGNENQHPLSF 367
L + + N P+
Sbjct: 384 RMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKK 419
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 1e-30
Identities = 61/262 (23%), Positives = 104/262 (39%), Gaps = 12/262 (4%)
Query: 103 LVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAI-PQELSILTSLQTLI 161
LV L LK L L + S SL L++ N + L L +L+ L
Sbjct: 297 LVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELD 356
Query: 162 LDENMLA--GRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEV 219
L + + L +L L L+L N ++F L +L L+ +
Sbjct: 357 LSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKD 416
Query: 220 PD--FSGLTYLQVLDLENNAL---GPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYY--- 271
F L L+VL+L ++ L Q L + L N F + +S
Sbjct: 417 AQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLG 476
Query: 272 QLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLL 331
+L+ L LS A SL + +++++ N+LT + LS + +++L+SN +
Sbjct: 477 RLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHI 535
Query: 332 TGQLPNCLLAGSKNRVVLYARN 353
+ LP+ L S+ R + +N
Sbjct: 536 SIILPSLLPILSQQRTINLRQN 557
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 2e-29
Identities = 54/292 (18%), Positives = 91/292 (31%), Gaps = 20/292 (6%)
Query: 75 SITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLS--S 132
L+ G + ++ + + L + + L S
Sbjct: 203 VFQSLNFGGTQNLLVIFKGLKNST-------IQSLWLGTFEDMDDEDISPAVFEGLCEMS 255
Query: 133 LEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFN 192
+E +N+ ++ + LQ L L L+ +P L L L L L N F
Sbjct: 256 VESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFE 314
Query: 193 GTLPDSFSYLENLRVLALSNNHFYGEVPD--FSGLTYLQVLDLENNALGPQFPKVG---- 246
S S +L L++ N E+ L L+ LDL ++ +
Sbjct: 315 NLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRN 374
Query: 247 -KKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLS-LPSITYLNIAD 304
L ++ LS N+ S QL+ LDL+ R Q+ L + LN++
Sbjct: 375 LSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSH 434
Query: 305 NKLTGKLFDDLSCNPELGFVDLSSNLLTG--QLPNCLLAGSKNRVVLYARNC 354
+ L P L ++L N L +L C
Sbjct: 435 SLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFC 486
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 119 bits (301), Expect = 2e-28
Identities = 60/243 (24%), Positives = 93/243 (38%), Gaps = 12/243 (4%)
Query: 102 TLVKLPDLKVLRLVSLGLWGPL-SGKISRLSSLEILNMSSNFLN--GAIPQELSILTSLQ 158
+ P L L + L +G + L +L L++S + + +L L+ LQ
Sbjct: 320 SASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQ 379
Query: 159 TLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDS-FSYLENLRVLALSNNHFYG 217
+L L N + P L +L L S F L L+VL LS++
Sbjct: 380 SLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDI 439
Query: 218 EVPD-FSGLTYLQVLDLENNAL------GPQFPKVGKKLVTMILSKNKFRSAIPAEVSSY 270
F GL LQ L+L+ N + +L ++LS S +S
Sbjct: 440 SSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSL 499
Query: 271 YQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNL 330
+ +DLS NR +AL L I YLN+A N ++ L L + ++L N
Sbjct: 500 KMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNP 558
Query: 331 LTG 333
L
Sbjct: 559 LDC 561
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 115 bits (289), Expect = 9e-27
Identities = 45/248 (18%), Positives = 81/248 (32%), Gaps = 10/248 (4%)
Query: 101 TTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTL 160
TT +L +L L L ++ L+ L +++N L LS +L+ L
Sbjct: 51 TTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHL 110
Query: 161 ILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYG-EV 219
+ ++ L + L L L +N + E L+VL NN +
Sbjct: 111 FFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSK 170
Query: 220 PDFSGLTYLQV--LDLENNALG--PQFPKVGKKLVTMILSKNKFRSAIPAEVS--SYYQL 273
D S L L+L N + ++ + I + + L
Sbjct: 171 EDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSL 230
Query: 274 QRLDLSSNRFVGPFPQALLSLP--SITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLL 331
P L S+ +N+ + + C L +DL++ L
Sbjct: 231 WLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHL 290
Query: 332 TGQLPNCL 339
+ +LP+ L
Sbjct: 291 S-ELPSGL 297
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 2e-26
Identities = 44/254 (17%), Positives = 82/254 (32%), Gaps = 14/254 (5%)
Query: 106 LPDLKVLRLVSLGL----WGPLSGKISRLSSLEILNMSSNFLNGAIPQELSI--LTSLQT 159
+ L+ +SL L + + + LN I + L + SL
Sbjct: 173 MSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWL 232
Query: 160 LILDENMLAGRVPDWLGSLPILAV--LSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYG 217
++ P L ++V ++L+ + F ++F L+ L L+ H
Sbjct: 233 GTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLSE 292
Query: 218 EVPDFSGLTYLQVLDLENNALG---PQFPKVGKKLVTMILSKNKFRSAIPAEV-SSYYQL 273
GL+ L+ L L N L + + N R + + L
Sbjct: 293 LPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENL 352
Query: 274 QRLDLSSNR--FVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLL 331
+ LDLS + L +L + LN++ N+ + P+L +DL+ L
Sbjct: 353 RELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRL 412
Query: 332 TGQLPNCLLAGSKN 345
+
Sbjct: 413 KVKDAQSPFQNLHL 426
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 1e-22
Identities = 42/226 (18%), Positives = 61/226 (26%), Gaps = 9/226 (3%)
Query: 130 LSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNN 189
+S E L S N L S L +L L L + D S L L L N
Sbjct: 32 PNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTAN 91
Query: 190 MFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKVG-- 246
+ S + L+ L L+ L L +N + G
Sbjct: 92 PLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFP 151
Query: 247 -KKLVTMILSKNKFRSAIPAEVSSYYQLQR--LDLSSNRFVGPFPQALLSLPSITYLNIA 303
+KL + N ++SS Q L+L+ N G LN
Sbjct: 152 TEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAG-IEPGAFDSAVFQSLNFG 210
Query: 304 DNKLTGKLFDDLSCN--PELGFVDLSSNLLTGQLPNCLLAGSKNRV 347
+ +F L + L P + V
Sbjct: 211 GTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSV 256
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 98.9 bits (247), Expect = 1e-21
Identities = 40/212 (18%), Positives = 65/212 (30%), Gaps = 10/212 (4%)
Query: 134 EILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNG 193
+ N + LN IP ++ S + L N+L L L L L
Sbjct: 15 KTYNCENLGLN-EIPG--TLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYW 71
Query: 194 TLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNAL---GPQFPKVGKKL 249
D+F L L L+ N SG L+ L + K L
Sbjct: 72 IHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTL 131
Query: 250 VTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSIT--YLNIADNKL 307
++ L N S + +L+ LD +N + + SL T LN+ N +
Sbjct: 132 ESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDI 191
Query: 308 TGKLFDDLSCNPELGFVDLSSNLLTGQLPNCL 339
G + + ++ + L
Sbjct: 192 AG-IEPGAFDSAVFQSLNFGGTQNLLVIFKGL 222
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 87.8 bits (218), Expect = 4e-18
Identities = 48/242 (19%), Positives = 85/242 (35%), Gaps = 43/242 (17%)
Query: 102 TLVKLPDLKVL-----RLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTS 156
+ P L++L RL P L L++LN+S + L+ + Q L +
Sbjct: 395 AFKECPQLELLDLAFTRLKVKDAQSPFQN----LHLLKVLNLSHSLLDISSEQLFDGLPA 450
Query: 157 LQTLILDENMLAG---RVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNN 213
LQ L L N + + L +L L +L L + +F+ L+ + + LS+N
Sbjct: 451 LQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHN 510
Query: 214 HFYGEVPD-FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQ 272
+ S L + L+ L+ N +P+ + Q
Sbjct: 511 RLTSSSIEALSHLKGI-YLN---------------------LASNHISIILPSLLPILSQ 548
Query: 273 LQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCN--PELGFVDLSSNL 330
+ ++L N ++ + + KL +D C P L V LS
Sbjct: 549 QRTINLRQNPLDCTCS----NIYFLEWYKENMQKLED--TEDTLCENPPLLRGVRLSDVT 602
Query: 331 LT 332
L+
Sbjct: 603 LS 604
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 121 bits (304), Expect = 4e-30
Identities = 61/356 (17%), Positives = 123/356 (34%), Gaps = 58/356 (16%)
Query: 467 FSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMH--HI 524
+ E +N +G G G +Y+G L + VA+ K+ + +NF++ +I
Sbjct: 3 AAASEPSLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAV---KVFSFANRQNFINEKNI 58
Query: 525 ELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQ 584
+ + H ++ + L+ EY PNG+L ++S + W
Sbjct: 59 YRVPLMEHDNIARFIVGDERV--TADGRMEYLLVMEYYPNGSLXKYLS----LHTSDWVS 112
Query: 585 RISAAIGVAKGIQFLHTGIVPGVFSN------NLKITDILLDQNLVAKIS---------- 628
A V +G+ +LHT + G +L ++L+ + IS
Sbjct: 113 SCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTG 172
Query: 629 SYNLPLLAENAEKVGHV--IPY------SGSIDPTNSARGKLEEKIDIYDFGLILLEIIV 680
+ + E+ + V I Y G+++ + +++D+Y GLI EI +
Sbjct: 173 NRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDX--ESALKQVDMYALGLIYWEIFM 230
Query: 681 G-RPLKSRKEVDLLKNQLQAVVTADESAR--RSMVD-----PAVNKACLDES--LKTMME 730
L + V + Q V + + +V P +A + S ++++ E
Sbjct: 231 RCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKE 290
Query: 731 VCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWHSQSSEGSPISPPRPSRQHLSFH 786
C ++ R + + + P+ H H
Sbjct: 291 TIEDCWDQDAEARLTAQXAEERMA----------ELMMIWERNKSVSPTAHHHHHH 336
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 9e-30
Identities = 50/280 (17%), Positives = 120/280 (42%), Gaps = 41/280 (14%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHS--TRNFMHHIELISKLRHRHLVSALGHC 542
+ E G++++GR + G + ++ LK++ + +R+F + H +++ LG C
Sbjct: 18 LNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC 76
Query: 543 FECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTG 602
LI ++P G+L + + EG + + +Q + A+ +A+G+ FLHT
Sbjct: 77 -----QSPPAPHPTLITHWMPYGSLYNVLHEGT-NFVVDQSQAVKFALDMARGMAFLHT- 129
Query: 603 IVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGH-------VIPYSGSIDPT 655
+ P + + L +++D+++ A+IS ++ ++ ++ +
Sbjct: 130 LEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAPAWVAPEAL--------Q 181
Query: 656 NSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTADESARRSMVDP 714
D++ F ++L E++ P DL + ++ + R P
Sbjct: 182 KKPEDTNRRSADMWSFAVLLWELVTREVPFA-----DL--SNMEIGMKVALEGLR----P 230
Query: 715 AVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754
+ + +M+ C+ ++PA+RP + ++ L+
Sbjct: 231 TIPPGI-SPHVSKLMK---ICMNEDPAKRPKFDMIVPILE 266
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 1e-28
Identities = 58/315 (18%), Positives = 117/315 (37%), Gaps = 59/315 (18%)
Query: 486 GEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFEC 545
G G+ G + + + + VAI+ +++ + F+ + +S++ H ++V G C
Sbjct: 17 GRGAFGVVCKAKWR-AKDVAIK--QIESESERKAFIVELRQLSRVNHPNIVKLYGACLNP 73
Query: 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVP 605
L+ EY G+L + + T +S + ++G+ +LH+
Sbjct: 74 VC---------LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPK 124
Query: 606 GVFSNNLKITDILLDQN-LVAKISSYNLPLLAENA--EKVGH-------VI---PYSGSI 652
+ +LK ++LL V KI + + G V YS
Sbjct: 125 ALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYS--- 181
Query: 653 DPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTADESARRSM 711
EK D++ +G+IL E+I R P ++ + + R
Sbjct: 182 -----------EKCDVFSWGIILWEVITRRKPFD-----EIGGPAFRIMWAVHNGTR--- 222
Query: 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ-----FAAQVQDAWHSQ 766
P + K + ++++M RC K+P++RPS+E+++ + F + +
Sbjct: 223 --PPLIKNL-PKPIESLMT---RCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQYPC 276
Query: 767 SSEGSPISPPRPSRQ 781
P R
Sbjct: 277 QHSLPPGEDGRVEPY 291
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 5e-28
Identities = 64/287 (22%), Positives = 118/287 (41%), Gaps = 56/287 (19%)
Query: 486 GEGSQGQMYRGRLKNGTFVAIRCLKMKKCHST--RNFMHHIELISKLRHRHLVSALGHCF 543
G GS G ++R G+ VA++ L + H+ F+ + ++ +LRH ++V +G
Sbjct: 46 GAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV- 103
Query: 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI 603
+ + ++ EY+ G+L + + A + L +R+S A VAKG+ +LH
Sbjct: 104 ------TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN-R 156
Query: 604 VPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGH------------VI---PY 648
P + NLK ++L+D+ K+ + L L + V+ P
Sbjct: 157 NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPS 216
Query: 649 SGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTADESA 707
+ EK D+Y FG+IL E+ + P +L N Q V
Sbjct: 217 N--------------EKSDVYSFGVILWELATLQQPWG-----NL--NPAQVVAAVGFKC 255
Query: 708 RRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754
+R + + + + ++E C P +RPS ++ L+
Sbjct: 256 KR----LEIPRNL-NPQVAAIIE---GCWTNEPWKRPSFATIMDLLR 294
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 117 bits (294), Expect = 2e-27
Identities = 55/264 (20%), Positives = 85/264 (32%), Gaps = 29/264 (10%)
Query: 75 SITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLW--GPLSGKISRLSS 132
+ Q + L L+ + S V LP L L L L G S +S
Sbjct: 318 QLKQFPTLDLPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNS 377
Query: 133 LEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVP-DWLGSLPILAVLSLRNNMF 191
L L++S N + L LQ L + L SL L L +
Sbjct: 378 LRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNT 436
Query: 192 NGTLPDSFSYLENLRVLALSNNHFYGEVPD--FSGLTYLQVLDLENNALGPQFPKVGKKL 249
F L +L L ++ N F F+ T L LDL L
Sbjct: 437 KIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQL----------- 485
Query: 250 VTMILSKNKFRSAIPAEV-SSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLT 308
I V + ++LQ L++S N + L S++ L+ + N++
Sbjct: 486 -----------EQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE 534
Query: 309 GKLFDDLSCNPELGFVDLSSNLLT 332
L F +L++N +
Sbjct: 535 TSKGILQHFPKSLAFFNLTNNSVA 558
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 6e-27
Identities = 55/272 (20%), Positives = 93/272 (34%), Gaps = 15/272 (5%)
Query: 90 LPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQ 149
+ L+ ++ + K + L ++ L + L L+ L ++ N G+I
Sbjct: 290 MSLAGVSIKYLEDVPKHFKWQSLSIIRCQLKQFPTLD---LPFLKSLTLTMN--KGSISF 344
Query: 150 ELSILTSLQTLILDENMLAGRVPD--WLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRV 207
+ L SL L L N L+ L L L N + +F LE L+
Sbjct: 345 KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMSANFMGLEELQH 403
Query: 208 LALSNNHFYG--EVPDFSGLTYLQVLDLENNALGPQFPKVGK---KLVTMILSKNKFRSA 262
L ++ E F L L LD+ F + L T+ ++ N F+
Sbjct: 404 LDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDN 463
Query: 263 IPAEV-SSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPEL 321
+ V ++ L LDLS + +L + LN++ N L + L
Sbjct: 464 TLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSL 523
Query: 322 GFVDLSSNLLTGQLPNCLLAGSKNRVVLYARN 353
+D S N + L K+ N
Sbjct: 524 STLDCSFNRIET-SKGILQHFPKSLAFFNLTN 554
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 2e-24
Identities = 43/252 (17%), Positives = 74/252 (29%), Gaps = 21/252 (8%)
Query: 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENM 166
K + L L S S S L+ L++S + + L L LIL N
Sbjct: 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNP 91
Query: 167 LAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD--FSG 224
+ P L L L L L+ L +++N + FS
Sbjct: 92 IQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSN 151
Query: 225 LTYLQVLDLENNALG-------PQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLD 277
LT L +DL N + + + +++ +S N I + +L L
Sbjct: 152 LTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDF-IQDQAFQGIKLHELT 210
Query: 278 LSSNRFVG-PFPQALLSLPSITYLNIADNKLTG---------KLFDDLSCNPELGFVDLS 327
L N L +L + + + + + L C+ + L+
Sbjct: 211 LRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGL-CDVTIDEFRLT 269
Query: 328 SNLLTGQLPNCL 339
Sbjct: 270 YTNDFSDDIVKF 281
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 2e-22
Identities = 45/286 (15%), Positives = 86/286 (30%), Gaps = 13/286 (4%)
Query: 75 SITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLE 134
+ +L + GN + + + + + +L + +L ++ P + +++
Sbjct: 205 KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTID 264
Query: 135 ILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGT 194
++ + L ++ + L + + LS+
Sbjct: 265 EFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLED--VPKHFKWQSLSIIRCQLKQF 322
Query: 195 LPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNAL-----GPQFPKVGKKL 249
L L+ L L+ N L L LDL NAL L
Sbjct: 323 ---PTLDLPFLKSLTLTMNKG-SISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSL 378
Query: 250 VTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVG-PFPQALLSLPSITYLNIADNKLT 308
+ LS N + A +LQ LD + A LSL + YL+I+
Sbjct: 379 RHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTK 437
Query: 309 GKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNC 354
L + ++ N + + A + N L C
Sbjct: 438 IDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKC 483
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 97.0 bits (242), Expect = 5e-21
Identities = 46/257 (17%), Positives = 79/257 (30%), Gaps = 24/257 (9%)
Query: 102 TLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGA-IPQELSILTSLQTL 160
+ L L+ L V L S I +L +L+ LN++ NF++ +P S LT+L +
Sbjct: 99 SFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHV 158
Query: 161 ILDENMLAGRVPDWLGSL----PILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFY 216
L N + + L L + L + N + +F + L L L N
Sbjct: 159 DLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNS 217
Query: 217 GEVPD--FSGLTYLQVLDLENN---------ALGPQFPKVGKKLVTMIL--SKNKFRSAI 263
+ L L V L P + + + S
Sbjct: 218 SNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDD 277
Query: 264 PAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGF 323
+ + + L+ + L+I +L DL P L
Sbjct: 278 IVKFHCLANVSAMSLAGVSIKYLED--VPKHFKWQSLSIIRCQLKQFPTLDL---PFLKS 332
Query: 324 VDLSSNLLTGQLPNCLL 340
+ L+ N + L
Sbjct: 333 LTLTMNKGSISFKKVAL 349
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 95.9 bits (239), Expect = 1e-20
Identities = 43/220 (19%), Positives = 73/220 (33%), Gaps = 15/220 (6%)
Query: 136 LNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTL 195
L+ +P ++ +S + + L N L + L L L
Sbjct: 16 YQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIE 72
Query: 196 PDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNAL----GPQFPKVGKKLV 250
++ L +L L L+ N P FSGLT L+ L L ++ L
Sbjct: 73 DKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQL-ITLK 131
Query: 251 TMILSKNKFRSA-IPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSIT----YLNIADN 305
+ ++ N S +PA S+ L +DLS N L L L+++ N
Sbjct: 132 KLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLN 191
Query: 306 KLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKN 345
+ + D +L + L N + + L
Sbjct: 192 PID-FIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAG 230
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 91.2 bits (227), Expect = 3e-19
Identities = 31/167 (18%), Positives = 52/167 (31%), Gaps = 10/167 (5%)
Query: 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSL 133
E + L + + S + L L L + G L+SL
Sbjct: 399 EELQHLDFQHSTLKRVTEFSA--------FLSLEKLLYLDISYTNTKIDFDGIFLGLTSL 450
Query: 134 EILNMSSNFLNGAIPQE-LSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFN 192
L M+ N + T+L L L + L +L L +L++ +N
Sbjct: 451 NTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLL 510
Query: 193 GTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNAL 238
++ L +L L S N L +L NN++
Sbjct: 511 FLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSV 557
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 6e-27
Identities = 61/320 (19%), Positives = 109/320 (34%), Gaps = 56/320 (17%)
Query: 486 GEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
G+G GQ + + G + ++ L + R F+ ++++ L H +++ +G
Sbjct: 19 GKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL-- 76
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
R+ I EY+ GTLR I + W+QR+S A +A G+ +LH
Sbjct: 77 -----YKDKRLNFITEYIKGGTLRGIIKSMDSQ--YPWSQRVSFAKDIASGMAYLH---- 125
Query: 605 PGVFSNN-----LKITDILLDQNLVAKISSYNL--PLLAENAEKVGHVIPYSGSIDPTNS 657
S N L + L+ +N ++ + L ++ E + G +
Sbjct: 126 ----SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYT 181
Query: 658 ARGKLE-------------EKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704
G EK+D++ FG++L EII R D +
Sbjct: 182 VVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII------GRVNADPDYLPRTMDFGLN 235
Query: 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ-----FAAQV 759
P C S + RC +P +RPS + L+ A +
Sbjct: 236 VRGFLDRYCP---PNC-PPSFFPITV---RCCDLDPEKRPSFVKLEHWLETLRMHLAGHL 288
Query: 760 QDAWHSQSSEGSPISPPRPS 779
+ + R
Sbjct: 289 PLGPQLEQLDRGFWETYRRG 308
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 9e-27
Identities = 44/204 (21%), Positives = 78/204 (38%), Gaps = 9/204 (4%)
Query: 130 LSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNN 189
+ +I ++ + L A+ +++ L L N L+ L L +L+L +N
Sbjct: 9 GNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSN 68
Query: 190 MFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKL 249
+ D L LR L L+NN+ + ++ L NN + G+
Sbjct: 69 VLY-ETLD-LESLSTLRTLDLNNNYV----QELLVGPSIETLHAANNNISRVSCSRGQGK 122
Query: 250 VTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVG-PFPQALLSLPSITYLNIADNKLT 308
+ L+ NK + ++Q LDL N F + S ++ +LN+ N +
Sbjct: 123 KNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY 182
Query: 309 GKLFDDLSCNPELGFVDLSSNLLT 332
+L +DLSSN L
Sbjct: 183 D--VKGQVVFAKLKTLDLSSNKLA 204
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 98.9 bits (247), Expect = 1e-22
Identities = 59/269 (21%), Positives = 104/269 (38%), Gaps = 22/269 (8%)
Query: 102 TLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLI 161
++K L L L + ++ + LE+LN+SSN L +L L++L+TL
Sbjct: 29 LRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYE--TLDLESLSTLRTLD 86
Query: 162 LDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD 221
L+ N + L P + L NN + + S + + + L+NN + D
Sbjct: 87 LNNNYVQE-----LLVGPSIETLHAANNNIS-RVS--CSRGQGKKNIYLANNKI-TMLRD 137
Query: 222 --FSGLTYLQVLDLENNAL----GPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQR 275
+ +Q LDL+ N + + L + L N + +V +L+
Sbjct: 138 LDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD-VKGQVVF-AKLKT 195
Query: 276 LDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLT-GQ 334
LDLSSN+ S +T++++ +NKL + L + L DL N G
Sbjct: 196 LDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGT 253
Query: 335 LPNCLLAGSKNRVVLYARNCLAAGNENQH 363
L + + + V G +
Sbjct: 254 LRDFFSKNQRVQTVAKQTVKKLTGQNEEE 282
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 79.6 bits (197), Expect = 3e-16
Identities = 38/239 (15%), Positives = 68/239 (28%), Gaps = 32/239 (13%)
Query: 101 TTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTL 160
L+ P ++ L + + SR + + +++N + + + +Q L
Sbjct: 93 QELLVGPSIETLHAANNNI---SRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYL 149
Query: 161 ILDENMLAG-RVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEV 219
L N + + S L L+L+ N + L+ L LS+N
Sbjct: 150 DLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY-DVKGQ-VVFAKLKTLDLSSNKLAFMG 207
Query: 220 PDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLS 279
P+F + + L NN L I + L+ DL
Sbjct: 208 PEFQSAAGVTWISLRNNKL----------------------VLIEKALRFSQNLEHFDLR 245
Query: 280 SNRFV-GPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPN 337
N F G + + K ++ P L LP
Sbjct: 246 GNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVPTL---GHYGAYCCEDLPA 301
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 73.1 bits (180), Expect = 4e-14
Identities = 27/183 (14%), Positives = 60/183 (32%), Gaps = 25/183 (13%)
Query: 172 PDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYG-EVPDFSGLTYLQV 230
+ + + + ++ L N++ L LS N D + T L++
Sbjct: 3 HEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLEL 62
Query: 231 LDLENNALG--PQFPK------------------VGKKLVTMILSKNKFRSAIPAEVSSY 270
L+L +N L VG + T+ + N +
Sbjct: 63 LNLSSNVLYETLDLESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISR-VSCSRGQ- 120
Query: 271 YQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCN-PELGFVDLSSN 329
+ + L++N+ + YL++ N++ F +L+ + L ++L N
Sbjct: 121 -GKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYN 179
Query: 330 LLT 332
+
Sbjct: 180 FIY 182
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 6e-11
Identities = 31/161 (19%), Positives = 59/161 (36%), Gaps = 17/161 (10%)
Query: 195 LPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNAL----GPQFPKVGKKL 249
+ + ++ ++++ + ++ LDL N L KL
Sbjct: 2 IHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPF-TKL 60
Query: 250 VTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTG 309
+ LS N ++ S L+ LDL++N Q LL PSI L+ A+N ++
Sbjct: 61 ELLNLSSNVLYE--TLDLESLSTLRTLDLNNNYV-----QELLVGPSIETLHAANNNIS- 112
Query: 310 KLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLY 350
++ S + L++N +T L + L
Sbjct: 113 RV--SCSRGQGKKNIYLANNKIT-MLRDLDEGCRSRVQYLD 150
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 1e-26
Identities = 55/278 (19%), Positives = 107/278 (38%), Gaps = 35/278 (12%)
Query: 486 GEGSQGQMYRGRLKNGTFVAIRCLKMKKCHST--RNFMHHIELISKLRHRHLVSALGHCF 543
G GS G +Y+G+ +G VA++ L + + F + + ++ K RH +++ +G+
Sbjct: 33 GSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS- 89
Query: 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI 603
+ ++ ++ ++ +L + + I A A+G+ +LH
Sbjct: 90 -------TAPQLAIVTQWCEGSSLYHHLHASE--TKFEMKKLIDIARQTARGMDYLHA-- 138
Query: 604 VPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPT------NS 657
+ +LK +I L ++ KI + L SGSI
Sbjct: 139 -KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 197
Query: 658 ARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAV 716
+ D+Y FG++L E++ G+ P + N ++ S V
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQLPYSN-------INNRDQIIEMVGRGSLSPDLSKV 250
Query: 717 NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754
C + +K +M CL K ERPS +L ++
Sbjct: 251 RSNC-PKRMKRLMA---ECLKKKRDERPSFPRILAEIE 284
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 107 bits (268), Expect = 9e-26
Identities = 57/303 (18%), Positives = 110/303 (36%), Gaps = 79/303 (26%)
Query: 486 GEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHST-------RNFMHHIELISKLRHRHLVS 537
G+G G +++GRL + + VAI+ L + + F + ++S L H ++V
Sbjct: 28 GKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVK 87
Query: 538 ALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQ 597
G ++ E+VP G L + + W+ ++ + +A GI+
Sbjct: 88 LYGLMHNPPR---------MVMEFVPCGDLYHRLL--DKAHPIKWSVKLRLMLDIALGIE 136
Query: 598 FLHTGIVPGVF----SNNLKITDILLDQNLVAKISSYNL-------------------P- 633
++ P V S N+ + + + + AK++ + L P
Sbjct: 137 YMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPE 196
Query: 634 -LLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVD 691
+ AE Y+ EK D Y F +IL I+ G P +
Sbjct: 197 TIGAEEE-------SYT--------------EKADTYSFAMILYTILTGEGPFD-----E 230
Query: 692 LLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLW 751
+++ + E R P + + C L+ ++E C +P +RP ++
Sbjct: 231 YSYGKIKFINMIREEGLR----PTIPEDC-PPRLRNVIE---LCWSGDPKKRPHFSYIVK 282
Query: 752 NLQ 754
L
Sbjct: 283 ELS 285
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 2e-25
Identities = 59/335 (17%), Positives = 113/335 (33%), Gaps = 30/335 (8%)
Query: 5 SRFSQCTLLVLAYILLQVNHSEQLQSSQAQTLLRIQGLLNNPAVLSSWNITTEFCNTEPT 64
S L L L L + + ++ + S+N +
Sbjct: 193 DILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYIL- 251
Query: 65 SSLTVVCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTL--VKLPDLKVLRLVSLGLWGP 122
++++ + + S V+ L V+ ++ L + L+
Sbjct: 252 ----------ELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYD 301
Query: 123 LSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDW---LGSLP 179
LS S L ++ + + ++ + L SL+ L L EN++ G+ P
Sbjct: 302 LSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWP 361
Query: 180 ILAVLSLRNNMFN--GTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNA 237
L L L N + L+NL L +S N F+ ++ L+L +
Sbjct: 362 SLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFHPMPDSCQWPEKMRFLNLSSTG 421
Query: 238 LGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSI 297
+ + + L + +S N S + LQ L +S N+ +L P +
Sbjct: 422 IRVVKTCIPQTLEVLDVSNNNLDS-FSLFLPR---LQELYISRNKLKTLPDASL--FPVL 475
Query: 298 TYLNIADNKLT---GKLFDDLSCNPELGFVDLSSN 329
+ I+ N+L +FD L L + L +N
Sbjct: 476 LVMKISRNQLKSVPDGIFDRL---TSLQKIWLHTN 507
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 7e-25
Identities = 57/238 (23%), Positives = 96/238 (40%), Gaps = 20/238 (8%)
Query: 75 SITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLE 134
+I +LHI L +S L +K + + + ++ L SLE
Sbjct: 287 TIRRLHIPQFYLFYDLSTVYS---------LLEKVKRITVENSKVFLVPCSFSQHLKSLE 337
Query: 135 ILNMSSNFLNGAIPQE---LSILTSLQTLILDENMLA--GRVPDWLGSLPILAVLSLRNN 189
L++S N + + SLQTL+L +N L + + L +L L L + N
Sbjct: 338 FLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRN 397
Query: 190 MFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKL 249
F+ +PDS + E +R L LS+ V L+VLD+ NN L F +L
Sbjct: 398 TFH-PMPDSCQWPEKMRFLNLSSTGI--RVVKTCIPQTLEVLDVSNNNLD-SFSLFLPRL 453
Query: 250 VTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKL 307
+ +S+NK ++ +P L + +S N+ L S+ + + N
Sbjct: 454 QELYISRNKLKT-LPDASLFP-VLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPW 509
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 95.2 bits (237), Expect = 2e-20
Identities = 43/209 (20%), Positives = 75/209 (35%), Gaps = 6/209 (2%)
Query: 130 LSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNN 189
++++ L++S N + +L +LQ LIL + + D SL L L L +N
Sbjct: 25 TAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDN 84
Query: 190 MFNGTLPDSFSYLENLRVLALSNNHFY--GEVPDFSGLTYLQVLDLENNALGPQFPKVG- 246
+ F L +L+ L L N + G F LT LQ L + N + ++
Sbjct: 85 HLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDF 144
Query: 247 ---KKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIA 303
L + + R+ + S + L L + L S+ YL +
Sbjct: 145 AGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELR 204
Query: 304 DNKLTGKLFDDLSCNPELGFVDLSSNLLT 332
D L F L + + + +
Sbjct: 205 DTNLARFQFSPLPVDEVSSPMKKLAFRGS 233
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 92.1 bits (229), Expect = 1e-19
Identities = 43/211 (20%), Positives = 82/211 (38%), Gaps = 13/211 (6%)
Query: 131 SSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNM 190
+ + + S +IP + ++++L L N + L + L VL L+++
Sbjct: 5 DASGVCDGRSRSFT-SIPS--GLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSR 61
Query: 191 FNGTLPDSFSYLENLRVLALSNNHFYGEVPD--FSGLTYLQVLDLENNAL-----GPQFP 243
N D+F L +L L LS+NH + F L+ L+ L+L N FP
Sbjct: 62 INTIEGDAFYSLGSLEHLDLSDNHLS-SLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFP 120
Query: 244 KVGKKLVTMILSKNKFRSAIPAEV-SSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNI 302
+ L T+ + + S I + L L++ + Q+L S+ I +L +
Sbjct: 121 NL-TNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTL 179
Query: 303 ADNKLTGKLFDDLSCNPELGFVDLSSNLLTG 333
++ L + +++L L
Sbjct: 180 HLSESAFLLEIFADILSSVRYLELRDTNLAR 210
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 88.2 bits (219), Expect = 2e-18
Identities = 38/237 (16%), Positives = 84/237 (35%), Gaps = 11/237 (4%)
Query: 102 TLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLI 161
L L L + +L L S + + + L + + + IL+S++ L
Sbjct: 143 DFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLE 202
Query: 162 LDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD 221
L + LA L + + + + +SF+ L L L +
Sbjct: 203 LRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVE----- 257
Query: 222 FSGLTYLQVLDLENNALG--PQFPKVGK-KLVTMILSKNKFRSAIPAEVSSYYQLQRLDL 278
F T + D + + KV + + + + + S +++R+ +
Sbjct: 258 FDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITV 317
Query: 279 SSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCN---PELGFVDLSSNLLT 332
+++ L S+ +L++++N + + + +C P L + LS N L
Sbjct: 318 ENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLR 374
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 76.3 bits (188), Expect = 1e-14
Identities = 42/252 (16%), Positives = 77/252 (30%), Gaps = 19/252 (7%)
Query: 101 TTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTL 160
L +L+VL L S + L SLE L++S N L+ L+SL+ L
Sbjct: 44 GDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYL 103
Query: 161 ILDENMLAG-RVPDWLGSLPILAVLSL-RNNMFNGTLPDSFSYLENLRVLALSNNHFYG- 217
L N V +L L L + F+ F+ L +L L +
Sbjct: 104 NLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNY 163
Query: 218 EVPDFSGLTYLQVLDLENN---ALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQ 274
+ + + L L + L F + + + L + +
Sbjct: 164 QSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSS 223
Query: 275 RLDLSSNRFV-------GPFPQALLSLPSITYLNIADNKLTG------KLFDDLSCNPEL 321
+ + R + L + ++ + D L G D +S ++
Sbjct: 224 PMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKV 283
Query: 322 GFVDLSSNLLTG 333
V + +
Sbjct: 284 ETVTIRRLHIPQ 295
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 55.5 bits (134), Expect = 4e-08
Identities = 32/139 (23%), Positives = 49/139 (35%), Gaps = 20/139 (14%)
Query: 95 SMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLN---GAIPQEL 151
SM L+ L +L L + P+ + LN+SS + IPQ L
Sbjct: 375 SMQKTGEILLTLKNLTSLDISRNTF-HPMPDSCQWPEKMRFLNLSSTGIRVVKTCIPQTL 433
Query: 152 SIL--------------TSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPD 197
+L LQ L + N L +PD P+L V+ + N
Sbjct: 434 EVLDVSNNNLDSFSLFLPRLQELYISRNKLK-TLPDA-SLFPVLLVMKISRNQLKSVPDG 491
Query: 198 SFSYLENLRVLALSNNHFY 216
F L +L+ + L N +
Sbjct: 492 IFDRLTSLQKIWLHTNPWD 510
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 2e-06
Identities = 29/127 (22%), Positives = 48/127 (37%), Gaps = 8/127 (6%)
Query: 228 LQVLDLENNALGPQFPK-VGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGP 286
V D + + P + + ++ LS NK ++ + LQ L L S+R
Sbjct: 7 SGVCDGRSRSF-TSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTI 65
Query: 287 FPQALLSLPSITYLNIADNKLT---GKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGS 343
A SL S+ +L+++DN L+ F L L +++L N L
Sbjct: 66 EGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPL---SSLKYLNLMGNPYQTLGVTSLFPNL 122
Query: 344 KNRVVLY 350
N L
Sbjct: 123 TNLQTLR 129
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 2e-25
Identities = 44/204 (21%), Positives = 78/204 (38%), Gaps = 9/204 (4%)
Query: 130 LSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNN 189
+ +I ++ + L A+ +++ L L N L+ L L +L+L +N
Sbjct: 9 GNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSN 68
Query: 190 MFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKL 249
+ D L LR L L+NN+ + ++ L NN + G+
Sbjct: 69 VLY-ETLD-LESLSTLRTLDLNNNYV----QELLVGPSIETLHAANNNISRVSCSRGQGK 122
Query: 250 VTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVG-PFPQALLSLPSITYLNIADNKLT 308
+ L+ NK + ++Q LDL N F + S ++ +LN+ N +
Sbjct: 123 KNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY 182
Query: 309 GKLFDDLSCNPELGFVDLSSNLLT 332
+L +DLSSN L
Sbjct: 183 D--VKGQVVFAKLKTLDLSSNKLA 204
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 97.6 bits (243), Expect = 2e-21
Identities = 54/258 (20%), Positives = 99/258 (38%), Gaps = 21/258 (8%)
Query: 102 TLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLI 161
++K L L L + ++ + LE+LN+SSN L +L L++L+TL
Sbjct: 29 LRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYE--TLDLESLSTLRTLD 86
Query: 162 LDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD 221
L+ N + L P + L NN + + + L+NN + D
Sbjct: 87 LNNNYVQE-----LLVGPSIETLHAANNNISRVSCSRGQ---GKKNIYLANNKI-TMLRD 137
Query: 222 --FSGLTYLQVLDLENNAL----GPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQR 275
+ +Q LDL+ N + + L + L N + +V + +L+
Sbjct: 138 LDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD-VKGQV-VFAKLKT 195
Query: 276 LDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQL 335
LDLSSN+ S +T++++ +NKL + L + L DL N
Sbjct: 196 LDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGT 253
Query: 336 PNCLLAGSKNRVVLYARN 353
+ ++ + +
Sbjct: 254 LRDFFSKNQRVQTVAKQT 271
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 85.3 bits (211), Expect = 2e-17
Identities = 32/248 (12%), Positives = 70/248 (28%), Gaps = 20/248 (8%)
Query: 102 TLVKLPDLKVL-----RLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTS 156
++ L + ++ + + +LE LN+ NF+ + ++
Sbjct: 139 DEGCRSRVQYLDLKLNEIDTV----NFAELAASSDTLEHLNLQYNFIY-DVKGQVV-FAK 192
Query: 157 LQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFY 216
L+TL L N LA + S + +SLRNN + + + +NL L N F+
Sbjct: 193 LKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFH 250
Query: 217 GEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRL 276
+V + + + ++ L +L L
Sbjct: 251 CGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVPTLGHYGAYCCEDLPAPFADRLIAL 310
Query: 277 DLSSNRF-------VGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSN 329
+ + ++ + + ++
Sbjct: 311 KRKEHALLSGQGSETERLECERENQARQREIDALKEQYRTVIDQVTLRKQAKITLEQKKK 370
Query: 330 LLTGQLPN 337
L Q+ N
Sbjct: 371 ALDEQVSN 378
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 80.7 bits (199), Expect = 4e-16
Identities = 33/234 (14%), Positives = 64/234 (27%), Gaps = 31/234 (13%)
Query: 101 TTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTL 160
L+ P ++ L + + SR + + +++N + + + +Q L
Sbjct: 93 QELLVGPSIETLHAANNNI---SRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYL 149
Query: 161 ILDENMLAG-RVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEV 219
L N + + S L L+L+ N + L+ L LS+N
Sbjct: 150 DLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY-DVKGQ-VVFAKLKTLDLSSNKLAFMG 207
Query: 220 PDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLS 279
P+F + + L NN L I + L+ DL
Sbjct: 208 PEFQSAAGVTWISLRNNKL----------------------VLIEKALRFSQNLEHFDLR 245
Query: 280 SNRFV-GPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLT 332
N F G + + + + +
Sbjct: 246 GNGFHCGTLRDFFSKNQRVQTVAK--QTVKKLTGQNEEECTVPTLGHYGAYCCE 297
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 73.0 bits (179), Expect = 1e-13
Identities = 32/186 (17%), Positives = 65/186 (34%), Gaps = 12/186 (6%)
Query: 171 VPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQ 229
+ + + + + ++ L N++ L LS N + T L+
Sbjct: 2 IHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLE 61
Query: 230 VLDLENNALG--PQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPF 287
+L+L +N L + L T+ L+ N + E+ ++ L ++N
Sbjct: 62 LLNLSSNVLYETLDLESL-STLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNISR-V 114
Query: 288 PQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRV 347
+ + +A+NK+T D C + ++DL N + L A S
Sbjct: 115 SCS--RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLE 172
Query: 348 VLYARN 353
L +
Sbjct: 173 HLNLQY 178
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 5e-25
Identities = 57/258 (22%), Positives = 96/258 (37%), Gaps = 15/258 (5%)
Query: 102 TLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLI 161
L +L+ L L S L G + LS+L L++S N + + L +L++L
Sbjct: 75 AFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLE 134
Query: 162 LDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD 221
+ +N L L L L+L ++ S+L L VL L + + + D
Sbjct: 135 VGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNIN-AIRD 193
Query: 222 --FSGLTYLQVLDL-ENNALGPQFPKV--GKKLVTMILSKNKFRSAIPAEV-SSYYQLQR 275
F L L+VL++ L P G L ++ ++ + +P L+
Sbjct: 194 YSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTA-VPYLAVRHLVYLRF 252
Query: 276 LDLSSNRFVGPFPQALLSLPSITYLNIADNKLT---GKLFDDLSCNPELGFVDLSSNLLT 332
L+LS N L L + + + +L F L L +++S N LT
Sbjct: 253 LNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGL---NYLRVLNVSGNQLT 309
Query: 333 GQLPNCLLAGSKNRVVLY 350
L + N L
Sbjct: 310 -TLEESVFHSVGNLETLI 326
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 5e-24
Identities = 54/245 (22%), Positives = 91/245 (37%), Gaps = 15/245 (6%)
Query: 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENM 166
+ ++L L + + + LE L ++ N ++ P + L +L+TL L N
Sbjct: 32 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91
Query: 167 LAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD--FSG 224
L L L L + N L F L NL+ L + +N + FSG
Sbjct: 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDL-VYISHRAFSG 150
Query: 225 LTYLQVLDLENNALGPQFPKVG----KKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSS 280
L L+ L LE L P L+ + L + Y+L+ L++S
Sbjct: 151 LNSLEQLTLEKCNLT-SIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISH 209
Query: 281 NRFVGPFPQALLSLPSITYLNIADNKLTG---KLFDDLSCNPELGFVDLSSNLLTGQLPN 337
++ L ++T L+I LT L L F++LS N ++ +
Sbjct: 210 WPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHL---VYLRFLNLSYNPIS-TIEG 265
Query: 338 CLLAG 342
+L
Sbjct: 266 SMLHE 270
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 3e-23
Identities = 48/226 (21%), Positives = 81/226 (35%), Gaps = 9/226 (3%)
Query: 131 SSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNM 190
+ +L++ N + E + L+ L L+EN+++ P +L L L LR+N
Sbjct: 32 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91
Query: 191 FNGTLPDSFSYLENLRVLALSNNHFYGEVPD--FSGLTYLQVLDLENNAL---GPQFPKV 245
F+ L NL L +S N + D F L L+ L++ +N L +
Sbjct: 92 LKLIPLGVFTGLSNLTKLDISENKI-VILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSG 150
Query: 246 GKKLVTMILSKNKFRSAIPAEV-SSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIAD 304
L + L K S IP E S + L L L + L + L I+
Sbjct: 151 LNSLEQLTLEKCNLTS-IPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISH 209
Query: 305 NKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLY 350
+ + L + ++ LT +P + L
Sbjct: 210 WPYLDTMTPNCLYGLNLTSLSITHCNLT-AVPYLAVRHLVYLRFLN 254
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 91.7 bits (228), Expect = 2e-19
Identities = 46/204 (22%), Positives = 76/204 (37%), Gaps = 12/204 (5%)
Query: 146 AIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENL 205
A+P+ + T + L L +N + D S P L L L N+ + P +F+ L NL
Sbjct: 25 AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNL 82
Query: 206 RVLALSNNHFYGEVPD--FSGLTYLQVLDLENNAL----GPQFPKVGKKLVTMILSKNKF 259
R L L +N +P F+GL+ L LD+ N + F + L ++ + N
Sbjct: 83 RTLGLRSNRL-KLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLY-NLKSLEVGDNDL 140
Query: 260 RSAIPAEV-SSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCN 318
I S L++L L +AL L + L + +
Sbjct: 141 VY-ISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRL 199
Query: 319 PELGFVDLSSNLLTGQLPNCLLAG 342
L +++S + L G
Sbjct: 200 YRLKVLEISHWPYLDTMTPNCLYG 223
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 82.1 bits (203), Expect = 1e-16
Identities = 36/209 (17%), Positives = 61/209 (29%), Gaps = 26/209 (12%)
Query: 102 TLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLI 161
L L+ L L L + +S L L +L + +N L L+ L
Sbjct: 147 AFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLE 206
Query: 162 LDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD 221
+ + L LS+ + + +L LR L LS N +
Sbjct: 207 ISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPI-STIEG 265
Query: 222 --FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEV-SSYYQLQRLDL 278
L LQ + L L + + L+ L++
Sbjct: 266 SMLHELLRLQEIQLVGGQL----------------------AVVEPYAFRGLNYLRVLNV 303
Query: 279 SSNRFVGPFPQALLSLPSITYLNIADNKL 307
S N+ S+ ++ L + N L
Sbjct: 304 SGNQLTTLEESVFHSVGNLETLILDSNPL 332
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 107 bits (268), Expect = 1e-24
Identities = 54/231 (23%), Positives = 86/231 (37%), Gaps = 13/231 (5%)
Query: 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENM 166
+ + L L+ + + L LE+L + N + + L SL TL L +N
Sbjct: 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134
Query: 167 LAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD--FSG 224
L L L L LRNN +F+ + +L L L + + F G
Sbjct: 135 LTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEG 194
Query: 225 LTYLQVLDLENNALG--PQFPKVGKKLVTMILSKNKFRSAIPAEV-SSYYQLQRLDLSSN 281
L L+ L+L + P + L + +S N F I L++L + ++
Sbjct: 195 LFNLKYLNLGMCNIKDMPNLTPL-VGLEELEMSGNHFPE-IRPGSFHGLSSLKKLWVMNS 252
Query: 282 RFVGPFPQALLSLPSITYLNIADNKLT---GKLFDDLSCNPELGFVDLSSN 329
+ A L S+ LN+A N L+ LF L L + L N
Sbjct: 253 QVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPL---RYLVELHLHHN 300
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 96.7 bits (241), Expect = 2e-21
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 18/233 (7%)
Query: 131 SSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNM 190
S+ LN+ N + L L+ L L N + L L L L +N
Sbjct: 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134
Query: 191 FNGTLPDSFSYLENLRVLALSNNHFYGEVPD--FSGLTYLQVLDLENN----ALGPQ-FP 243
+F YL LR L L NN +P F+ + L LDL + F
Sbjct: 135 LTVIPSGAFEYLSKLRELWLRNNPI-ESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFE 193
Query: 244 KVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIA 303
+ L + L + +P ++ L+ L++S N F P + L S+ L +
Sbjct: 194 GLF-NLKYLNLGMCNIKD-MPN-LTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVM 250
Query: 304 DNKLT---GKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARN 353
+++++ FD L L ++L+ N L+ LP+ L + V L+ +
Sbjct: 251 NSQVSLIERNAFDGL---ASLVELNLAHNNLS-SLPHDLFTPLRYLVELHLHH 299
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 79.8 bits (197), Expect = 9e-16
Identities = 43/191 (22%), Positives = 70/191 (36%), Gaps = 31/191 (16%)
Query: 146 AIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENL 205
+PQ + ++ + L L EN + D L L VL L N +F+ L +L
Sbjct: 68 EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASL 125
Query: 206 RVLALSNNHFYGEVPD--FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAI 263
L L +N +P F L+ L+ L L NN + +I
Sbjct: 126 NTLELFDNWL-TVIPSGAFEYLSKLRELWLRNNPI----------------------ESI 162
Query: 264 PAEV-SSYYQLQRLDLSS-NRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPEL 321
P+ + L RLDL + A L ++ YLN+ + +L+ L
Sbjct: 163 PSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD--MPNLTPLVGL 220
Query: 322 GFVDLSSNLLT 332
+++S N
Sbjct: 221 EELEMSGNHFP 231
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 71.7 bits (176), Expect = 3e-13
Identities = 47/194 (24%), Positives = 71/194 (36%), Gaps = 25/194 (12%)
Query: 102 TLVKLPDLKVL-----RLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQE-LSILT 155
L L L L + SG LS L L + +N + +IP + +
Sbjct: 118 AFNGLASLNTLELFDNWLTVIP-----SGAFEYLSKLRELWLRNNPIE-SIPSYAFNRVP 171
Query: 156 SLQTLILDE-NMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNH 214
SL L L E L L L L+L + + L L L +S NH
Sbjct: 172 SLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNI--KDMPNLTPLVGLEELEMSGNH 229
Query: 215 FYGEVPD--FSGLTYLQVLDLENNALGPQFPKVG----KKLVTMILSKNKFRSAIPAEV- 267
F E+ F GL+ L+ L + N+ + + LV + L+ N S +P ++
Sbjct: 230 F-PEIRPGSFHGLSSLKKLWVMNSQVS-LIERNAFDGLASLVELNLAHNNLSS-LPHDLF 286
Query: 268 SSYYQLQRLDLSSN 281
+ L L L N
Sbjct: 287 TPLRYLVELHLHHN 300
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 68.2 bits (167), Expect = 3e-12
Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 6/140 (4%)
Query: 102 TLVKLPDLKVLRLVSLGLWGPLSGKI-SRLSSLEILNMSSNFLNGAIPQELSILTSLQTL 160
++P L L L L +S L +L+ LN+ + +P L+ L L+ L
Sbjct: 166 AFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIK-DMP-NLTPLVGLEEL 223
Query: 161 ILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVP 220
+ N P L L L + N+ + ++F L +L L L++N+ +P
Sbjct: 224 EMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNL-SSLP 282
Query: 221 D--FSGLTYLQVLDLENNAL 238
F+ L YL L L +N
Sbjct: 283 HDLFTPLRYLVELHLHHNPW 302
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 49.0 bits (117), Expect = 5e-06
Identities = 24/95 (25%), Positives = 36/95 (37%)
Query: 98 SFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSL 157
+ L L L+ L + G LSSL+ L + ++ ++ L SL
Sbjct: 209 KDMPNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASL 268
Query: 158 QTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFN 192
L L N L+ D L L L L +N +N
Sbjct: 269 VELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 1e-24
Identities = 57/210 (27%), Positives = 83/210 (39%), Gaps = 13/210 (6%)
Query: 128 SRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLR 187
L LEIL +S N + + L +L TL L +N L L L L LR
Sbjct: 85 KHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLR 144
Query: 188 NNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD--FSGLTYLQVLDLENNALG--PQFP 243
NN +F+ + +LR L L + + F GL+ L+ L+L L P
Sbjct: 145 NNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLT 204
Query: 244 KVGKKLVTMILSKNKFRSAIPAEV-SSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNI 302
+ KL + LS N + I LQ+L + ++ A +L S+ +N+
Sbjct: 205 PLI-KLDELDLSGNHLSA-IRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINL 262
Query: 303 ADNKLT---GKLFDDLSCNPELGFVDLSSN 329
A N LT LF L L + L N
Sbjct: 263 AHNNLTLLPHDLFTPL---HHLERIHLHHN 289
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 98.7 bits (246), Expect = 5e-22
Identities = 53/233 (22%), Positives = 89/233 (38%), Gaps = 18/233 (7%)
Query: 131 SSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNM 190
++ +LN+ N + L L+ L L N + L L L L +N
Sbjct: 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123
Query: 191 FNGTLPDSFSYLENLRVLALSNNHFYGEVPD--FSGLTYLQVLDLENN----ALGPQ-FP 243
+F YL L+ L L NN +P F+ + L+ LDL + F
Sbjct: 124 LTTIPNGAFVYLSKLKELWLRNNPI-ESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFE 182
Query: 244 KVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIA 303
+ L + L+ R IP ++ +L LDLS N P + L + L +
Sbjct: 183 GLS-NLRYLNLAMCNLRE-IPN-LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMI 239
Query: 304 DNKLT---GKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARN 353
+++ FD+L L ++L+ N LT LP+ L + ++ +
Sbjct: 240 QSQIQVIERNAFDNL---QSLVEINLAHNNLT-LLPHDLFTPLHHLERIHLHH 288
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 80.2 bits (198), Expect = 5e-16
Identities = 49/191 (25%), Positives = 76/191 (39%), Gaps = 31/191 (16%)
Query: 146 AIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENL 205
+P +S T+ + L L EN + + L L +L L N +F+ L NL
Sbjct: 57 EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANL 114
Query: 206 RVLALSNNHFYGEVPD--FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAI 263
L L +N +P+ F L+ L+ L L NN + +I
Sbjct: 115 NTLELFDNRL-TTIPNGAFVYLSKLKELWLRNNPI----------------------ESI 151
Query: 264 PAEV-SSYYQLQRLDLSS-NRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPEL 321
P+ + L+RLDL R A L ++ YLN+A L +L+ +L
Sbjct: 152 PSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE--IPNLTPLIKL 209
Query: 322 GFVDLSSNLLT 332
+DLS N L+
Sbjct: 210 DELDLSGNHLS 220
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 74.4 bits (183), Expect = 4e-14
Identities = 41/184 (22%), Positives = 70/184 (38%), Gaps = 29/184 (15%)
Query: 102 TLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQE-LSILTSLQTL 160
V L LK L L + + S +R+ SL L++ I + L++L+ L
Sbjct: 131 AFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYL 190
Query: 161 ILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVP 220
L L +P+ L L L L L N + P SF L +L+ L + + +
Sbjct: 191 NLAMCNLR-EIPN-LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQI-QVIE 247
Query: 221 D--FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEV-SSYYQLQRLD 277
F L L ++L +N L + +P ++ + + L+R+
Sbjct: 248 RNAFDNLQSLVEINLAHNNL----------------------TLLPHDLFTPLHHLERIH 285
Query: 278 LSSN 281
L N
Sbjct: 286 LHHN 289
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 68.6 bits (168), Expect = 3e-12
Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 6/140 (4%)
Query: 102 TLVKLPDLKVLRLVSLGLWGPLSGKI-SRLSSLEILNMSSNFLNGAIPQELSILTSLQTL 160
++P L+ L L L +S LS+L LN++ L IP L+ L L L
Sbjct: 155 AFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDEL 212
Query: 161 ILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVP 220
L N L+ P L L L + + ++F L++L + L++N+ +P
Sbjct: 213 DLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNL-TLLP 271
Query: 221 D--FSGLTYLQVLDLENNAL 238
F+ L +L+ + L +N
Sbjct: 272 HDLFTPLHHLERIHLHHNPW 291
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 47.1 bits (112), Expect = 2e-05
Identities = 23/95 (24%), Positives = 31/95 (32%)
Query: 98 SFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSL 157
+ L L L L L L G L L+ L M + + L SL
Sbjct: 198 REIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSL 257
Query: 158 QTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFN 192
+ L N L D L L + L +N +N
Sbjct: 258 VEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 2e-24
Identities = 55/295 (18%), Positives = 107/295 (36%), Gaps = 67/295 (22%)
Query: 486 GEGSQGQMYRGRLKNGTFVAIRCLKMKKCHST----RNFMHHIELISKLRHRHLVSALGH 541
G G G++YR G VA++ + N +L + L+H ++++ G
Sbjct: 16 GIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGV 74
Query: 542 CFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHT 601
C + L+ E+ G L +S + + ++ A+ +A+G+ +LH
Sbjct: 75 C-------LKEPNLCLVMEFARGGPLNRVLSG----KRIPPDILVNWAVQIARGMNYLHD 123
Query: 602 GIVPGVFSNNLKITDILLDQ--------NLVAKISSYNLPLLAENAEKVGH--------- 644
+ + +LK ++IL+ Q N + KI+ + L K+
Sbjct: 124 EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAP 183
Query: 645 -VI---PYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQA 699
VI +S + D++ +G++L E++ G P + + L
Sbjct: 184 EVIRASMFS--------------KGSDVWSYGVLLWELLTGEVPFRG-------IDGLAV 222
Query: 700 VVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754
+ + C E +ME C +P RPS ++L L
Sbjct: 223 AYGVAMNKLA----LPIPSTC-PEPFAKLME---DCWNPDPHSRPSFTNILDQLT 269
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 2e-24
Identities = 72/363 (19%), Positives = 120/363 (33%), Gaps = 31/363 (8%)
Query: 7 FSQCTLLVLAYILLQVNHSEQLQSSQAQTLLRIQGLLNNPAV----LSSWNITTE----F 58
L++ L N L S + + N + +S T + F
Sbjct: 168 LEPLQGKTLSFFSLAAN---SLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNF 224
Query: 59 CNTEPTSSLTVVCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLG 118
N S + I + D + ++ L L
Sbjct: 225 SNAISKSQAFSLILAHHIMGAGFGFHN-------IKDPDQNTFAGLARSSVRHLDLSHGF 277
Query: 119 LWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSL 178
++ S L L++LN++ N +N + L +LQ L L N+L L
Sbjct: 278 VFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGL 337
Query: 179 PILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNAL 238
P +A + L+ N +F +LE L+ L L +N + + + L N L
Sbjct: 338 PKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNAL----TTIHFIPSIPDIFLSGNKL 393
Query: 239 GPQFPKVGKKLVTMILSKNKFRS-AIPAEVSSYYQLQRLDLSSNRFVGPFPQALLS-LPS 296
PK+ + LS+N+ + I + LQ L L+ NRF S PS
Sbjct: 394 V-TLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPS 452
Query: 297 ITYLNIADNKL-----TGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYA 351
+ L + +N L T +D L + L+ N L LP + + L
Sbjct: 453 LEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLN-SLPPGVFSHLTALRGLSL 511
Query: 352 RNC 354
+
Sbjct: 512 NSN 514
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 92.6 bits (230), Expect = 2e-19
Identities = 51/226 (22%), Positives = 79/226 (34%), Gaps = 34/226 (15%)
Query: 128 SRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRV-PDWLGSLPILAVLSL 186
L++ E L +S N++ L LQ L L + + +LP L +L L
Sbjct: 21 QVLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDL 80
Query: 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD---FSGLTYLQVLDLENNALGPQFP 243
++ PD+F L +L L L V F L L LD
Sbjct: 81 GSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLD----------- 129
Query: 244 KVGKKLVTMILSKNKFRSAIPAEV-SSYYQLQRLDLSSNRFVGPFPQAL--LSLPSITYL 300
LSKN+ RS L+ +D SSN+ L L ++++
Sbjct: 130 ----------LSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFF 179
Query: 301 NIADNKLTGKLFDDLS------CNPELGFVDLSSNLLTGQLPNCLL 340
++A N L ++ D N L +D+S N T +
Sbjct: 180 SLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFS 225
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 89.1 bits (221), Expect = 2e-18
Identities = 53/260 (20%), Positives = 89/260 (34%), Gaps = 29/260 (11%)
Query: 101 TTLVKLPDLKVLRLVSLGLWG-PLSGKISRLSSLEILNMSSNFLNGAIPQELSILT--SL 157
L L L L + L +L+SL+ ++ SSN + EL L +L
Sbjct: 117 GYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTL 176
Query: 158 QTLILDENMLAGRVP-DWLGSLPILAVLSLR-----------------NNMFNGTLPDSF 199
L N L RV DW + + L +N + + S
Sbjct: 177 SFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSL 236
Query: 200 SYLENLRVLALSNNHFYG-EVPDFSGL--TYLQVLDLENNAL----GPQFPKVGKKLVTM 252
++ ++ + F+GL + ++ LDL + + F + K L +
Sbjct: 237 ILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETL-KDLKVL 295
Query: 253 ILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLF 312
L+ NK LQ L+LS N + LP + Y+++ N +
Sbjct: 296 NLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQD 355
Query: 313 DDLSCNPELGFVDLSSNLLT 332
+L +DL N LT
Sbjct: 356 QTFKFLEKLQTLDLRDNALT 375
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 78.7 bits (194), Expect = 4e-15
Identities = 61/274 (22%), Positives = 101/274 (36%), Gaps = 35/274 (12%)
Query: 67 LTVVCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGK 126
LT + + SI + + GNK + ++ + + L RL +L +
Sbjct: 374 LTTIHFIPSIPDIFLSGNKLVTLPKINLTANLI--------HLSENRLENL----DILYF 421
Query: 127 ISRLSSLEILNMSSNFLNGAIPQEL-SILTSLQTLILDENMLAGRV-----PDWLGSLPI 180
+ R+ L+IL ++ N + + S SL+ L L ENML D L
Sbjct: 422 LLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSH 481
Query: 181 LAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGP 240
L VL L +N N P FS+L LR L+L++N + L++LD+ N L
Sbjct: 482 LQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRL-TVLSHNDLPANLEILDISRNQLLA 540
Query: 241 QFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYL 300
P V L + ++ NKF +LS+ ++ P
Sbjct: 541 PNPDVFVSLSVLDITHNKFICEC-------------ELSTFINWLNHTNVTIAGPPADIY 587
Query: 301 NIADNKLTGKL---FDDLSCNPELGFVDLSSNLL 331
+ + +G C+ E L +L
Sbjct: 588 CVYPDSFSGVSLFSLSTEGCDEEEVLKSLKFSLF 621
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 71.8 bits (176), Expect = 5e-13
Identities = 31/155 (20%), Positives = 50/155 (32%), Gaps = 13/155 (8%)
Query: 188 NNMFNGTLPDSFSYLENLRVLALSNNHFYGEVP--DFSGLTYLQVLDLENNALGPQFPKV 245
F L L L LS N+ V F L LQ+L+L + K
Sbjct: 10 FYRFCN-LTQVPQVLNTTERLLLSFNYI-RTVTASSFPFLEQLQLLELGSQYTPLTIDKE 67
Query: 246 G----KKLVTMILSKNKFRSAIPAEV-SSYYQLQRLDLSSNRF--VGPFPQALLSLPSIT 298
L + L +K + + + L L L +L ++T
Sbjct: 68 AFRNLPNLRILDLGSSKIYF-LHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALT 126
Query: 299 YLNIADNKLTG-KLFDDLSCNPELGFVDLSSNLLT 332
L+++ N++ L L +D SSN +
Sbjct: 127 RLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIF 161
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 51.0 bits (122), Expect = 1e-06
Identities = 25/119 (21%), Positives = 44/119 (36%), Gaps = 3/119 (2%)
Query: 229 QVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPF- 287
++ L Q P+V ++LS N R+ + QLQ L+L S
Sbjct: 7 RIAFYRFCNL-TQVPQVLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTID 65
Query: 288 PQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLT-GQLPNCLLAGSKN 345
+A +LP++ L++ +K+ D L + L L+ L + K
Sbjct: 66 KEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKA 124
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 6e-24
Identities = 48/236 (20%), Positives = 94/236 (39%), Gaps = 17/236 (7%)
Query: 100 VTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQT 159
V T +L + L + + + G I L++LE LN++ N + P LS L L
Sbjct: 37 VVTQEELESITKLVVAGEKVAS-IQG-IEYLTNLEYLNLNGNQITDISP--LSNLVKLTN 92
Query: 160 LILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEV 219
L + N + L +L L L L + + + L + L L NH ++
Sbjct: 93 LYIGTNKI--TDISALQNLTNLRELYLNEDNISD--ISPLANLTKMYSLNLGANHNLSDL 148
Query: 220 PDFSGLTYLQVLDLENNALGPQFPKVG--KKLVTMILSKNKFRSAIPAEVSSYYQLQRLD 277
S +T L L + + + + L ++ L+ N+ P ++S L
Sbjct: 149 SPLSNMTGLNYLTVTESKVK-DVTPIANLTDLYSLSLNYNQIEDISP--LASLTSLHYFT 205
Query: 278 LSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTG 333
N+ + ++ + L I +NK+T L+ +L ++++ +N ++
Sbjct: 206 AYVNQITD--ITPVANMTRLNSLKIGNNKITD--LSPLANLSQLTWLEIGTNQISD 257
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 97.6 bits (244), Expect = 4e-22
Identities = 46/232 (19%), Positives = 95/232 (40%), Gaps = 15/232 (6%)
Query: 103 LVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLIL 162
L L + L L + LS +S ++ L L ++ + + P ++ LT L +L L
Sbjct: 128 LANLTKMYSLNLGANHNLSDLSP-LSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSL 184
Query: 163 DENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDF 222
+ N + P L SL L + N + + L L + NN ++
Sbjct: 185 NYNQIEDISP--LASLTSLHYFTAYVNQITD--ITPVANMTRLNSLKIGNNKI-TDLSPL 239
Query: 223 SGLTYLQVLDLENNALGPQFPKVG--KKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSS 280
+ L+ L L++ N + V KL + + N+ + +++ QL L L++
Sbjct: 240 ANLSQLTWLEIGTNQIS-DINAVKDLTKLKMLNVGSNQISD--ISVLNNLSQLNSLFLNN 296
Query: 281 NRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLT 332
N+ + + L ++T L ++ N +T L+ ++ D ++ ++
Sbjct: 297 NQLGNEDMEVIGGLTNLTTLFLSQNHITD--IRPLASLSKMDSADFANQVIK 346
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 67.6 bits (166), Expect = 4e-12
Identities = 32/179 (17%), Positives = 62/179 (34%), Gaps = 13/179 (7%)
Query: 157 LQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFY 216
TL + P L L+ + T + LE++ L ++
Sbjct: 2 AATLATLPAPINQIFP--DADLAEGIRAVLQKA--SVTDVVTQEELESITKLVVAGEKV- 56
Query: 217 GEVPDFSGLTYLQVLDLENNALG--PQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQ 274
+ LT L+ L+L N + + KL + + NK + + + L+
Sbjct: 57 ASIQGIEYLTNLEYLNLNGNQITDISPLSNL-VKLTNLYIGTNKITD--ISALQNLTNLR 113
Query: 275 RLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTG 333
L L+ + P L +L + LN+ N L LS L ++ ++ + +
Sbjct: 114 ELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDL-SPLSNMTGLNYLTVTESKVKD 169
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 7e-24
Identities = 44/209 (21%), Positives = 82/209 (39%), Gaps = 9/209 (4%)
Query: 128 SRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLR 187
L +L L + +N ++ P + L L+ L L +N L +P+ L L +
Sbjct: 73 KNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPE--KMPKTLQELRVH 129
Query: 188 NNMFNGTLPDSFSYLENLRVLALSNNHFY-GEVPD--FSGLTYLQVLDLENNALGPQFPK 244
N F+ L + V+ L N + + F G+ L + + + +
Sbjct: 130 ENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQG 189
Query: 245 VGKKLVTMILSKNKFRSAIPAEV-SSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIA 303
+ L + L NK + A L +L LS N +L + P + L++
Sbjct: 190 LPPSLTELHLDGNKITK-VDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLN 248
Query: 304 DNKLTGKLFDDLSCNPELGFVDLSSNLLT 332
+NKL K+ L+ + + V L +N ++
Sbjct: 249 NNKLV-KVPGGLADHKYIQVVYLHNNNIS 276
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 86.6 bits (215), Expect = 1e-18
Identities = 47/212 (22%), Positives = 83/212 (39%), Gaps = 20/212 (9%)
Query: 131 SSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNM 190
+L++ +N + + L +L TLIL N ++ P L L L L N
Sbjct: 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ 111
Query: 191 FNGTLPDSFSYLENLRVLALSNNHFYGEVPD--FSGLTYLQVLDLENNALGPQFPKVG-- 246
LP+ + L+ L + N +V F+GL + V++L N L + G
Sbjct: 112 LK-ELPEKM--PKTLQELRVHENEIT-KVRKSVFNGLNQMIVVELGTNPLKSSGIENGAF 167
Query: 247 ---KKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIA 303
KKL + ++ + IP + L L L N+ +L L ++ L ++
Sbjct: 168 QGMKKLSYIRIADTNITT-IPQGLPP--SLTELHLDGNKITKVDAASLKGLNNLAKLGLS 224
Query: 304 DNKLTG---KLFDDLSCNPELGFVDLSSNLLT 332
N ++ + P L + L++N L
Sbjct: 225 FNSISAVDNGSLANT---PHLRELHLNNNKLV 253
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 85.1 bits (211), Expect = 5e-18
Identities = 47/210 (22%), Positives = 73/210 (34%), Gaps = 24/210 (11%)
Query: 102 TLVKLPDLKVLRLVS--LGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQT 159
L + V+ L + L G +G + L + ++ + IPQ L SL
Sbjct: 140 VFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGL--PPSLTE 196
Query: 160 LILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEV 219
L LD N + L L LA L L N + S + +LR L L+NN +V
Sbjct: 197 LHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KV 255
Query: 220 PD-FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDL 278
P + Y+QV+ L NN + + N F P + + L
Sbjct: 256 PGGLADHKYIQVVYLHNNNI-------------SAIGSNDFCP--PGYNTKKASYSGVSL 300
Query: 279 SSNRFVGPF--PQALLSLPSITYLNIADNK 306
SN P + + + + K
Sbjct: 301 FSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 84.7 bits (210), Expect = 7e-18
Identities = 37/217 (17%), Positives = 69/217 (31%), Gaps = 44/217 (20%)
Query: 128 SRLSSLEILNMSSNFL-NGAIPQE-LSILTSLQTLILDENMLAGRVPDWLGSLPILAVLS 185
+ L+ + ++ + +N L + I + L + + + + +P G P L L
Sbjct: 142 NGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQ--GLPPSLTELH 198
Query: 186 LRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD--FSGLTYLQVLDLENNALGPQFP 243
L N S L NL L LS N V + + +L+ L L NN L
Sbjct: 199 LDGNKITKVDAASLKGLNNLAKLGLSFNSI-SAVDNGSLANTPHLRELHLNNNKL----- 252
Query: 244 KVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRF------VGPFPQALLSLPSI 297
+P ++ + +Q + L +N P S
Sbjct: 253 -----------------VKVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASY 295
Query: 298 TYLNIADNKLTGK-----LFDDLSCNPELGFVDLSSN 329
+ +++ N + F + V L +
Sbjct: 296 SGVSLFSNPVQYWEIQPSTFRCV---YVRAAVQLGNY 329
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 4e-14
Identities = 52/211 (24%), Positives = 87/211 (41%), Gaps = 25/211 (11%)
Query: 156 SLQTLILDENMLAGRVPDWLGSLPI-LAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNH 214
L+ + + L +VP LP A+L L+NN F L+NL L L NN
Sbjct: 32 HLRVVQCSDLGLE-KVPK---DLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNK 87
Query: 215 FYGEVPD--FSGLTYLQVLDLENNALGPQFPK-VGKKLVTMILSKNKFRSAIPAEV-SSY 270
++ F+ L L+ L L N L + P+ + K L + + +N+ + V +
Sbjct: 88 I-SKISPGAFAPLVKLERLYLSKNQL-KELPEKMPKTLQELRVHENEITK-VRKSVFNGL 144
Query: 271 YQLQRLDLSSNRFVGPF--PQALLSLPSITYLNIADNKLTG---KLFDDLSCNPELGFVD 325
Q+ ++L +N A + ++Y+ IAD +T L L+ EL
Sbjct: 145 NQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLT---EL---H 198
Query: 326 LSSNLLTGQLPNCLLAGSKNRVVLY-ARNCL 355
L N +T ++ L G N L + N +
Sbjct: 199 LDGNKIT-KVDAASLKGLNNLAKLGLSFNSI 228
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 8e-24
Identities = 54/311 (17%), Positives = 96/311 (30%), Gaps = 32/311 (10%)
Query: 5 SRFSQCTLLVLAYILLQVNHSEQLQSSQAQTLLRIQGLLNNPAVLSSWNITTEFCNTEPT 64
+F + L L + ++ L + L N + +
Sbjct: 244 EKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYN 303
Query: 65 SSLTVVCYEE-SITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLV--SLGLWG 121
+ Q + K L + + + V LP L+ L L L G
Sbjct: 304 FGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKG 363
Query: 122 PLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDW--LGSLP 179
S +SL+ L++S N + + L L+ L + L ++ ++ SL
Sbjct: 364 CCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLK-QMSEFSVFLSLR 421
Query: 180 ILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD--FSGLTYLQVLDLENNA 237
L L + + F+ L +L VL ++ N F F+ L L LDL
Sbjct: 422 NLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQ 481
Query: 238 LGPQFPKVGKKLVTMILSKNKFRSAIPAEV-SSYYQLQRLDLSSNRFVGPFPQALLSLPS 296
L + +S LQ L+++SN+ L S
Sbjct: 482 L----------------------EQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTS 519
Query: 297 ITYLNIADNKL 307
+ + + N
Sbjct: 520 LQKIWLHTNPW 530
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 97.5 bits (243), Expect = 3e-21
Identities = 54/266 (20%), Positives = 101/266 (37%), Gaps = 25/266 (9%)
Query: 92 LSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQEL 151
L + +D + L ++ LVS+ + S + L + + P
Sbjct: 267 LDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDF--SYNFGWQHLELVNCKFGQ-FPT-- 321
Query: 152 SILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFN--GTLPDSFSYLENLRVLA 209
L SL+ L N LP L L L N + G S +L+ L
Sbjct: 322 LKLKSLKRLTFTSNKGGNAFS--EVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLD 379
Query: 210 LSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVG-----KKLVTMILSKNKFRSAIP 264
LS N +F GL L+ LD +++ L Q + + L+ + +S R
Sbjct: 380 LSFNGVITMSSNFLGLEQLEHLDFQHSNLK-QMSEFSVFLSLRNLIYLDISHTHTRV-AF 437
Query: 265 AEV-SSYYQLQRLDLSSNRFVGPFPQALLS-LPSITYLNIADNKLTG---KLFDDLSCNP 319
+ + L+ L ++ N F F + + L ++T+L+++ +L F+ L
Sbjct: 438 NGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSL---S 494
Query: 320 ELGFVDLSSNLLTGQLPNCLLAGSKN 345
L ++++SN L +P+ + +
Sbjct: 495 SLQVLNMASNQLK-SVPDGIFDRLTS 519
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 95.6 bits (238), Expect = 1e-20
Identities = 42/232 (18%), Positives = 75/232 (32%), Gaps = 13/232 (5%)
Query: 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENM 166
K L L L S L++L++S + L+ L TLIL N
Sbjct: 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87
Query: 167 LAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFY--GEVPDFSG 224
+ L L L +L+ L+ L +++N FS
Sbjct: 88 IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSN 147
Query: 225 LTYLQVLDLENNALG-------PQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLD 277
LT L+ LDL +N + ++ +++ LS N I +L +L
Sbjct: 148 LTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNF-IQPGAFKEIRLHKLT 206
Query: 278 LSSNRF-VGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSS 328
L +N + + L + + + + +L + L +
Sbjct: 207 LRNNFDSLNVMKTCIQGLAGLEVHRLVLGEF--RNEGNLEKFDKSALEGLCN 256
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 89.8 bits (223), Expect = 8e-19
Identities = 51/241 (21%), Positives = 78/241 (32%), Gaps = 19/241 (7%)
Query: 139 SSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDS 198
IP L S + L L N L S P L VL L +
Sbjct: 15 MELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGA 71
Query: 199 FSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALG---PQFPKVGKKLVTMIL 254
+ L +L L L+ N FSGL+ LQ L L K L + +
Sbjct: 72 YQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 131
Query: 255 SKNKFRS-AIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITY----LNIADNKLTG 309
+ N +S +P S+ L+ LDLSSN+ + L L + L+++ N +
Sbjct: 132 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNF 191
Query: 310 ---KLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAAGNENQHPLS 366
F ++ L + L +N + + + G V N
Sbjct: 192 IQPGAFKEIR----LHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFD 247
Query: 367 F 367
Sbjct: 248 K 248
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 89.4 bits (222), Expect = 1e-18
Identities = 56/276 (20%), Positives = 92/276 (33%), Gaps = 22/276 (7%)
Query: 94 FSMDSFVTTLVKLPDLKVLRLVSLG------LWGPLSGKISRLSSLEILNMSSNFLNG-- 145
S++ T + L L+V RLV L + L +L I +L+
Sbjct: 212 DSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYL 271
Query: 146 -AIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLEN 204
I + LT++ + L + RV D+ L L N F L++
Sbjct: 272 DDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSY-NFGWQHLELVNCKFGQ---FPTLKLKS 326
Query: 205 LRVLALSNNHFYGEVPDFSGLTYLQVLDLENNAL-----GPQFPKVGKKLVTMILSKNKF 259
L+ L ++N G L L+ LDL N L Q L + LS N
Sbjct: 327 LKRLTFTSNKG-GNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGV 385
Query: 260 RSAIPAEVSSYYQLQRLDLSSNRFVG-PFPQALLSLPSITYLNIADNKLTGKLFDDLSCN 318
+ + + QL+ LD + LSL ++ YL+I+ +
Sbjct: 386 IT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGL 444
Query: 319 PELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNC 354
L + ++ N + +N L C
Sbjct: 445 SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQC 480
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 77.1 bits (190), Expect = 8e-15
Identities = 46/251 (18%), Positives = 77/251 (30%), Gaps = 27/251 (10%)
Query: 102 TLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLN-GAIPQELSILTSLQTL 160
L L+ L V L + I L +L+ LN++ N + +P+ S LT+L+ L
Sbjct: 95 AFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHL 154
Query: 161 ILDENMLAGRVPDWLGSLPIL----AVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFY 216
L N + L L + L L N N P +F + L L L NN
Sbjct: 155 DLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDS 213
Query: 217 GEVPD--FSGLTYLQVLDLENNALGPQ------FPKVGKKLVTMILSKNK------FRSA 262
V GL L+V L + + L + + + + +
Sbjct: 214 LNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDD 273
Query: 263 IPAEVSSYYQLQRLDLSSNRFVGPFPQA-LLSLPSITYLNIADNKLTGKLFDDLSCNPEL 321
I + + L S + + +N + L
Sbjct: 274 IIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKR---- 329
Query: 322 GFVDLSSNLLT 332
+ +SN
Sbjct: 330 --LTFTSNKGG 338
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 3e-06
Identities = 23/97 (23%), Positives = 37/97 (38%), Gaps = 1/97 (1%)
Query: 102 TLVKLPDLKVLRLVSLGL-WGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTL 160
L L+VL++ L + L +L L++S L P + L+SLQ L
Sbjct: 440 IFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 499
Query: 161 ILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPD 197
+ N L L L + L N ++ + P
Sbjct: 500 NMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 9e-24
Identities = 61/299 (20%), Positives = 121/299 (40%), Gaps = 47/299 (15%)
Query: 486 GEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMH--HIELISKLRHRHLVSALGHCF 543
G+G G+++RG+ + G VA+ K+ R++ I LRH +++ +
Sbjct: 51 GKGRFGEVWRGKWR-GEEVAV---KIFSSREERSWFREAEIYQTVMLRHENILGFIAADN 106
Query: 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI 603
+ + + ++++L+ +Y +G+L +++ ++T I A+ A G+ LH I
Sbjct: 107 KD---NGTWTQLWLVSDYHEHGSLFDYLN----RYTVTVEGMIKLALSTASGLAHLHMEI 159
Query: 604 V-----PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYS--GSI---- 652
V P + +LK +IL+ +N I+ L + ++A + P G+
Sbjct: 160 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 219
Query: 653 -----DPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKE-----------VDLLKNQ 696
D N + ++ DIY GL+ EI + E D +
Sbjct: 220 PEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEE 279
Query: 697 LQAVVTADESARRSMVDPAVNKACL-DESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754
++ VV ++ R P + E+L+ M ++ C N A R + + L
Sbjct: 280 MRKVV-CEQKLR-----PNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 332
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 9e-24
Identities = 60/234 (25%), Positives = 101/234 (43%), Gaps = 15/234 (6%)
Query: 100 VTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQT 159
+ L + L+ LG+ + G + L++L +N S+N L P L LT L
Sbjct: 39 TVSQTDLDQVTTLQADRLGIKS-IDG-VEYLNNLTQINFSNNQLTDITP--LKNLTKLVD 94
Query: 160 LILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEV 219
++++ N +A P L +L L L+L NN D L NL L LS+N ++
Sbjct: 95 ILMNNNQIADITP--LANLTNLTGLTLFNNQITD--IDPLKNLTNLNRLELSSNTI-SDI 149
Query: 220 PDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLS 279
SGLT LQ L N + L + +S NK + ++ L+ L +
Sbjct: 150 SALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKLTNLESLIAT 207
Query: 280 SNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTG 333
+N+ P L L ++ L++ N+L L+ L +DL++N ++
Sbjct: 208 NNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISN 257
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 99.3 bits (248), Expect = 4e-22
Identities = 59/230 (25%), Positives = 97/230 (42%), Gaps = 19/230 (8%)
Query: 127 ISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186
++ L++LE L++SSN ++ L+ LT+L++LI N ++ P LG L L LSL
Sbjct: 173 LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSL 228
Query: 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVG 246
N + + L NL L L+NN + SGLT L L L N + +
Sbjct: 229 NGNQLKD--IGTLASLTNLTDLDLANNQISN-LAPLSGLTKLTELKLGANQIS-NISPLA 284
Query: 247 --KKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIAD 304
L + L++N+ P +S+ L L L N P + SL + L +
Sbjct: 285 GLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYN 340
Query: 305 NKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNC 354
NK++ L+ + ++ N ++ P LA L +
Sbjct: 341 NKVSD--VSSLANLTNINWLSAGHNQISDLTP---LANLTRITQLGLNDQ 385
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 88.9 bits (221), Expect = 1e-18
Identities = 53/236 (22%), Positives = 89/236 (37%), Gaps = 14/236 (5%)
Query: 98 SFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSL 157
S ++ L KL +L+ L + + ++ + L++L+ L+++ N L L+ LT+L
Sbjct: 190 SDISVLAKLTNLESLIATNNQISD-ITP-LGILTNLDELSLNGNQLKD--IGTLASLTNL 245
Query: 158 QTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYG 217
L L N ++ P L L L L L N + + L L L L+ N
Sbjct: 246 TDLDLANNQISNLAP--LSGLTKLTELKLGANQISNI--SPLAGLTALTNLELNENQLED 301
Query: 218 EVPDFSGLTYLQVLDLENNALGPQFPKVG-KKLVTMILSKNKFRSAIPAEVSSYYQLQRL 276
+ S L L L L N + P KL + NK + +++ + L
Sbjct: 302 -ISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSD--VSSLANLTNINWL 358
Query: 277 DLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLT 332
N+ P L +L IT L + D T + + V + L
Sbjct: 359 SAGHNQISDLTP--LANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALI 412
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 78.5 bits (194), Expect = 2e-15
Identities = 42/226 (18%), Positives = 73/226 (32%), Gaps = 35/226 (15%)
Query: 129 RLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRN 188
L S I +N + L +L + + V L + L
Sbjct: 2 PLGSATITQ--DTPINQIFT--DTALAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADR 55
Query: 189 NMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGK- 247
D YL NL + SNN + LT L + + NN + +
Sbjct: 56 L--GIKSIDGVEYLNNLTQINFSNNQLTD-ITPLKNLTKLVDILMNNNQI-ADITPLANL 111
Query: 248 -KLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLS------------- 293
L + L N+ P + + L RL+LSSN + L+
Sbjct: 112 TNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTD 169
Query: 294 ------LPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTG 333
L ++ L+I+ NK++ L+ L + ++N ++
Sbjct: 170 LKPLANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISD 213
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 69.2 bits (170), Expect = 2e-12
Identities = 38/191 (19%), Positives = 66/191 (34%), Gaps = 11/191 (5%)
Query: 103 LVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLIL 162
L L L L L L IS L +L L + N ++ P +S LT LQ L
Sbjct: 283 LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFF 338
Query: 163 DENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDF 222
N ++ L +L + LS +N + P + L + L L++ + ++
Sbjct: 339 YNNKVSD--VSSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNAPVNY 394
Query: 223 SGLTYLQ--VLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSS 280
+ V ++ + P G ++ N ++ Q + +
Sbjct: 395 KANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSY-TNEVSYTFSQPVTIGKGT 453
Query: 281 NRFVGPFPQAL 291
F G Q L
Sbjct: 454 TTFSGTVTQPL 464
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 1e-23
Identities = 51/214 (23%), Positives = 79/214 (36%), Gaps = 17/214 (7%)
Query: 131 SSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGR--VPDWLGSLPILAVLSLRN 188
SS L + SN L LT L L L N L+ + L L L
Sbjct: 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSF 87
Query: 189 NMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD---FSGLTYLQVLDLENNALGPQFPKV 245
N T+ +F LE L L +++ ++ + F L L LD+ + F +
Sbjct: 88 NGVI-TMSSNFLGLEQLEHLDFQHSNL-KQMSEFSVFLSLRNLIYLDISHTHTRVAFNGI 145
Query: 246 --G-KKLVTMILSKNKFRSAIPAEV-SSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLN 301
G L + ++ N F+ ++ + L LDLS + P A SL S+ LN
Sbjct: 146 FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 205
Query: 302 IADNKLTG---KLFDDLSCNPELGFVDLSSNLLT 332
++ N + L L +D S N +
Sbjct: 206 MSHNNFFSLDTFPYKCL---NSLQVLDYSLNHIM 236
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 97.8 bits (244), Expect = 2e-22
Identities = 51/215 (23%), Positives = 87/215 (40%), Gaps = 18/215 (8%)
Query: 128 SRLSSLEILNMSSNFLN--GAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLS 185
+L+ L L++SSN L+ G Q TSL+ L L N + + L L L
Sbjct: 49 DKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLD 107
Query: 186 LRNNMFNGTLPDS-FSYLENLRVLALSNNHFYGEVPD--FSGLTYLQVLDLENNALGPQF 242
+++ S F L NL L +S+ H + F+GL+ L+VL + N+ F
Sbjct: 108 FQHSNLKQMSEFSVFLSLRNLIYLDISHTHT-RVAFNGIFNGLSSLEVLKMAGNSFQENF 166
Query: 243 PKVG----KKLVTMILSKNKFRSAIPAEVSSY-YQLQRLDLSSNRFVGPFPQALLSLPSI 297
+ L + LS+ + + + LQ L++S N F L S+
Sbjct: 167 LPDIFTELRNLTFLDLSQCQLEQ-LSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSL 225
Query: 298 TYLNIADNKLT---GKLFDDLSCNPELGFVDLSSN 329
L+ + N + + + L F++L+ N
Sbjct: 226 QVLDYSLNHIMTSKKQELQHFPSS--LAFLNLTQN 258
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 95.8 bits (239), Expect = 8e-22
Identities = 61/244 (25%), Positives = 89/244 (36%), Gaps = 23/244 (9%)
Query: 75 SITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVS--LGLWGPLSGKISRLSS 132
S T+L + NK + F KL L L L S L G S +S
Sbjct: 29 SATRLELESNKLQSLPHGVFD---------KLTQLTKLSLSSNGLSFKGCCSQSDFGTTS 79
Query: 133 LEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPD--WLGSLPILAVLSLRNNM 190
L+ L++S N + + L L+ L + L ++ + SL L L + +
Sbjct: 80 LKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNL-KQMSEFSVFLSLRNLIYLDISHTH 137
Query: 191 FNGTLPDSFSYLENLRVLALSNNHFYGEVPD--FSGLTYLQVLDLENN---ALGPQFPKV 245
F+ L +L VL ++ N F F+ L L LDL L P
Sbjct: 138 TRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNS 197
Query: 246 GKKLVTMILSKNKFRSAIPAEV-SSYYQLQRLDLSSNRFVGPFPQALLSLP-SITYLNIA 303
L + +S N F S + LQ LD S N + Q L P S+ +LN+
Sbjct: 198 LSSLQVLNMSHNNFFS-LDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLT 256
Query: 304 DNKL 307
N
Sbjct: 257 QNDF 260
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 86.2 bits (214), Expect = 1e-18
Identities = 54/222 (24%), Positives = 76/222 (34%), Gaps = 27/222 (12%)
Query: 132 SLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNM- 190
S + +S L ++P I +S L L+ N L L L LSL +N
Sbjct: 8 SGTEIRCNSKGLT-SVPT--GIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGL 64
Query: 191 -FNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKL 249
F G S +L+ L LS N +F GL L+ LD +++ L
Sbjct: 65 SFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNL----------- 113
Query: 250 VTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTG 309
+ + F S L LD+S F L S+ L +A N
Sbjct: 114 -KQMSEFSVFLSLR--------NLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQE 164
Query: 310 KLFDDLSCN-PELGFVDLSSNLLTGQLPNCLLAGSKNRVVLY 350
D+ L F+DLS L QL + VL
Sbjct: 165 NFLPDIFTELRNLTFLDLSQCQLE-QLSPTAFNSLSSLQVLN 205
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 2e-23
Identities = 51/210 (24%), Positives = 80/210 (38%), Gaps = 17/210 (8%)
Query: 131 SSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNM 190
++ + + + N ++ +L L L N+LA L +L L L +N
Sbjct: 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNA 91
Query: 191 FNGTLP-DSFSYLENLRVLALSNNHFYGEVPD--FSGLTYLQVLDLENNAL----GPQFP 243
++ +F L L L L E+ F GL LQ L L++NAL F
Sbjct: 92 QLRSVDPATFHGLGRLHTLHLDRCGL-QELGPGLFRGLAALQYLYLQDNALQALPDDTFR 150
Query: 244 KVGKKLVTMILSKNKFRSAIPAEV-SSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNI 302
+G L + L N+ S +P + L RL L NR P A L + L +
Sbjct: 151 DLG-NLTHLFLHGNRISS-VPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYL 208
Query: 303 ADNKLT---GKLFDDLSCNPELGFVDLSSN 329
N L+ + L L ++ L+ N
Sbjct: 209 FANNLSALPTEALAPL---RALQYLRLNDN 235
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 88.5 bits (220), Expect = 2e-19
Identities = 47/196 (23%), Positives = 75/196 (38%), Gaps = 15/196 (7%)
Query: 146 AIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENL 205
A+P + + Q + L N ++ + L +L L +N+ +F+ L L
Sbjct: 25 AVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALL 82
Query: 206 RVLALSNNHFYGEVPD--FSGLTYLQVLDLENN---ALGPQFPKVGKKLVTMILSKNKFR 260
L LS+N V F GL L L L+ LGP + L + L N +
Sbjct: 83 EQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ 142
Query: 261 SAIPAEV-SSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLT---GKLFDDLS 316
+ +P + L L L NR +A L S+ L + N++ F DL
Sbjct: 143 A-LPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDL- 200
Query: 317 CNPELGFVDLSSNLLT 332
L + L +N L+
Sbjct: 201 --GRLMTLYLFANNLS 214
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 83.5 bits (207), Expect = 1e-17
Identities = 52/208 (25%), Positives = 75/208 (36%), Gaps = 27/208 (12%)
Query: 102 TLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQE-LSILTSLQTL 160
+ +L +L L S L + + L+ LE L++S N ++ L L TL
Sbjct: 51 SFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110
Query: 161 ILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVP 220
LD L P L L L L++N D+F L NL L L N VP
Sbjct: 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRI-SSVP 169
Query: 221 D--FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEV-SSYYQLQRLD 277
+ F GL L L L N + + + +L L
Sbjct: 170 ERAFRGLHSLDRLLLHQNRV----------------------AHVHPHAFRDLGRLMTLY 207
Query: 278 LSSNRFVGPFPQALLSLPSITYLNIADN 305
L +N +AL L ++ YL + DN
Sbjct: 208 LFANNLSALPTEALAPLRALQYLRLNDN 235
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 9e-13
Identities = 42/172 (24%), Positives = 60/172 (34%), Gaps = 23/172 (13%)
Query: 75 SITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVL-----RLVSLGLWGPLSGKISR 129
+ QL + N + + T L L L L LG G
Sbjct: 81 LLEQLDLSDNAQLRSVD--------PATFHGLGRLHTLHLDRCGLQELG-----PGLFRG 127
Query: 130 LSSLEILNMSSNFLNGAIPQE-LSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRN 188
L++L+ L + N L A+P + L +L L L N ++ L L L L
Sbjct: 128 LAALQYLYLQDNALQ-ALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQ 186
Query: 189 NMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD--FSGLTYLQVLDLENNAL 238
N P +F L L L L N+ +P + L LQ L L +N
Sbjct: 187 NRVAHVHPHAFRDLGRLMTLYLFANNL-SALPTEALAPLRALQYLRLNDNPW 237
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 7e-04
Identities = 24/91 (26%), Positives = 33/91 (36%)
Query: 102 TLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLI 161
T L +L L L + L SL+ L + N + P L L TL
Sbjct: 148 TFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLY 207
Query: 162 LDENMLAGRVPDWLGSLPILAVLSLRNNMFN 192
L N L+ + L L L L L +N +
Sbjct: 208 LFANNLSALPTEALAPLRALQYLRLNDNPWV 238
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 2e-23
Identities = 58/299 (19%), Positives = 108/299 (36%), Gaps = 47/299 (15%)
Query: 486 GEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMH--HIELISKLRHRHLVSALGHCF 543
G+G G+++ G+ + G VA+ K+ ++ I +RH +++ +
Sbjct: 46 GKGRYGEVWMGKWR-GEKVAV---KVFFTTEEASWFRETEIYQTVLMRHENILGFIAADI 101
Query: 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI 603
+ S ++++LI +Y NG+L ++ +L + A G+ LHT I
Sbjct: 102 K---GTGSWTQLYLITDYHENGSLYDYLK----STTLDAKSMLKLAYSSVSGLCHLHTEI 154
Query: 604 VPGVFSNN-----LKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYS--GSI---- 652
LK +IL+ +N I+ L + + + P + G+
Sbjct: 155 FSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMP 214
Query: 653 -----DPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQA---VVTAD 704
+ N + D+Y FGLIL E+ R + + Q +
Sbjct: 215 PEVLDESLNRNHFQSYIMADMYSFGLILWEVA------RRCVSGGIVEEYQLPYHDLVPS 268
Query: 705 ESARRSMVDPAVNK---------ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754
+ + M + K DE L+ M ++ C NPA R + V L
Sbjct: 269 DPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLA 327
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 99.0 bits (247), Expect = 7e-23
Identities = 60/305 (19%), Positives = 111/305 (36%), Gaps = 59/305 (19%)
Query: 486 GEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIEL--ISKLRHRHLVSALGHCF 543
G+G G+++RG G VA+ K+ +++ EL LRH +++ +
Sbjct: 17 GKGRYGEVWRGSW-QGENVAV---KIFSSRDEKSWFRETELYNTVMLRHENILGFIASDM 72
Query: 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI 603
S ++++LI Y G+L ++ +L + + +A G+ LH I
Sbjct: 73 T---SRHSSTQLWLITHYHEMGSLYDYLQ----LTTLDTVSCLRIVLSIASGLAHLHIEI 125
Query: 604 VPGVFSNN-----LKITDILLDQNLVAKI----------SSYNLPLLAENAEKVG----- 643
LK +IL+ +N I S N + N VG
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR-VGTKRYM 184
Query: 644 --HVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKE-----------V 690
V+ +I +++DI+ FGL+L E+ E
Sbjct: 185 APEVL--DETI---QVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPN 239
Query: 691 DLLKNQLQAVVTADESARRSMVDPAV-NKACLDESLKTMMEVCVRCLLKNPAERPSVEDV 749
D ++ VV + R P + N+ D +L ++ ++ C +NP+ R + +
Sbjct: 240 DPSFEDMRKVV-CVDQQR-----PNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRI 293
Query: 750 LWNLQ 754
L
Sbjct: 294 KKTLT 298
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 98.1 bits (245), Expect = 2e-22
Identities = 49/249 (19%), Positives = 84/249 (33%), Gaps = 21/249 (8%)
Query: 106 LPDLKVLRLVSLGLWG----PLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLI 161
L D V+L L + RLS L+ + + + L +P + L+TL
Sbjct: 75 LEDATQPGRVALELRSVPLPQFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLT 133
Query: 162 LDENMLAGRVPDWLGSLPILAVLSLRNN---------MFNGTLPDSFSYLENLRVLALSN 212
L N L +P + SL L LS+R + + L NL+ L L
Sbjct: 134 LARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEW 192
Query: 213 NHFYGEVPD-FSGLTYLQVLDLENNALGPQFPK-VGK--KLVTMILSKNKFRSAIPAEVS 268
+P + L L+ L + N+ L + KL + L P
Sbjct: 193 TGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFG 250
Query: 269 SYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSS 328
L+RL L + P + L + L++ +L ++ P + +
Sbjct: 251 GRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPP 310
Query: 329 NLLTGQLPN 337
+L +
Sbjct: 311 HLQAQLDQH 319
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 85.4 bits (212), Expect = 4e-18
Identities = 33/183 (18%), Positives = 68/183 (37%), Gaps = 15/183 (8%)
Query: 127 ISRLSSLEILNMSSN---------FLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGS 177
I+ L+ L L++ + + E L +LQ+L L+ + +P + +
Sbjct: 146 IASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIAN 204
Query: 178 LPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENN 236
L L L +RN+ + L + +L L L L P F G L+ L L++
Sbjct: 205 LQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDC 263
Query: 237 ALGPQFPK-VG--KKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLS 293
+ P + +L + L S +P+ ++ + + + ++
Sbjct: 264 SNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQLDQHRPVA 323
Query: 294 LPS 296
P+
Sbjct: 324 RPA 326
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 85.0 bits (211), Expect = 5e-18
Identities = 35/166 (21%), Positives = 59/166 (35%), Gaps = 3/166 (1%)
Query: 75 SITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLE 134
+ +L I LP + L +L+ LRL G+ L I+ L +L+
Sbjct: 151 RLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIRS-LPASIANLQNLK 209
Query: 135 ILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGT 194
L + ++ L+ A+ + L L+ L L P G L L L++ T
Sbjct: 210 SLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLT 268
Query: 195 LPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALG 239
LP L L L L +P + L ++ + +
Sbjct: 269 LPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 79.2 bits (196), Expect = 4e-16
Identities = 42/246 (17%), Positives = 75/246 (30%), Gaps = 25/246 (10%)
Query: 109 LKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLA 168
+ L P +S+ + + + + Q L
Sbjct: 14 RENLYFQGSTALRPYHDVLSQWQRHYNADRNRWHS----AWRQANSNNPQIETRTGRALK 69
Query: 169 GRVPDWLGSL--PILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGL 225
D L P L LR+ PD L +L+ + + E+PD
Sbjct: 70 -ATADLLEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGL-MELPDTMQQF 126
Query: 226 TYLQVLDLENNALGPQFPK-VG--KKLVTMILSKNKFRSAIPAEVSSYY---------QL 273
L+ L L N L P + +L + + + +P ++S L
Sbjct: 127 AGLETLTLARNPL-RALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNL 185
Query: 274 QRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTG 333
Q L L P ++ +L ++ L I ++ L+ L + P+L +DL
Sbjct: 186 QSLRLEWTGIRS-LPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALR 243
Query: 334 QLPNCL 339
P
Sbjct: 244 NYPPIF 249
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 97.0 bits (242), Expect = 4e-22
Identities = 52/297 (17%), Positives = 103/297 (34%), Gaps = 68/297 (22%)
Query: 486 GEGSQGQMYRGRLKNGTFVAIRCLKMKKCHST--RNFMHHIELISKLRHRHLVSALGHCF 543
G+G GQ+Y GR +G VAIR + +++ + + F + + RH ++V +G C
Sbjct: 42 GKGRFGQVYHGRW-HGE-VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC- 98
Query: 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHT-G 602
S + +I TL S + A L + A + KG+ +LH G
Sbjct: 99 ------MSPPHLAIITSLCKGRTLYSVVR--DAKIVLDVNKTRQIAQEIVKGMGYLHAKG 150
Query: 603 IV------PGVF--SNNLKITD-----ILLDQNLVAKISSYNLP-----------LLAEN 638
I+ VF + + ITD I + + + +
Sbjct: 151 ILHKDLKSKNVFYDNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLS 210
Query: 639 AEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQL 697
+ +P+S + D++ G I E+ P K+ +
Sbjct: 211 PDTEEDKLPFS--------------KHSDVFALGTIWYELHAREWPFKT-------QPAE 249
Query: 698 QAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754
+ + P +++ + + + ++ C ERP+ ++ L+
Sbjct: 250 AIIWQMGTGMK-----PNLSQIGMGKEISDILL---FCWAFEQEERPTFTKLMDMLE 298
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 97.0 bits (242), Expect = 6e-22
Identities = 51/209 (24%), Positives = 83/209 (39%), Gaps = 10/209 (4%)
Query: 128 SRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLR 187
L L L + +N ++ + S L LQ L + +N L +P L L +
Sbjct: 75 KGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPP--NLPSSLVELRIH 131
Query: 188 NNMFNGTLPDSFSYLENLRVLALSNNHFY-GEVPD--FSGLTYLQVLDLENNALGPQFPK 244
+N FS L N+ + + N F GL L L + L
Sbjct: 132 DNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLK-LNYLRISEAKLTGIPKD 190
Query: 245 VGKKLVTMILSKNKFRSAIPAEV-SSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIA 303
+ + L + L NK ++ I E Y +L RL L N+ +L LP++ L++
Sbjct: 191 LPETLNELHLDHNKIQA-IELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLD 249
Query: 304 DNKLTGKLFDDLSCNPELGFVDLSSNLLT 332
+NKL+ ++ L L V L +N +T
Sbjct: 250 NNKLS-RVPAGLPDLKLLQVVYLHTNNIT 277
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 86.6 bits (215), Expect = 2e-18
Identities = 46/211 (21%), Positives = 80/211 (37%), Gaps = 19/211 (9%)
Query: 131 SSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNM 190
+L++ +N ++ + L L L+L N ++ L L L + N
Sbjct: 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNH 113
Query: 191 FNGTLPDSFSYLENLRVLALSNNHFYGEVPD--FSGLTYLQVLDLENNALGPQFPKVGK- 247
P+ S L LR + +N +VP FSGL + +++ N L + G
Sbjct: 114 LVEIPPNLPSSLVELR---IHDNRIR-KVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAF 169
Query: 248 ---KLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIAD 304
KL + +S+ K IP ++ L L L N+ + LL + L +
Sbjct: 170 DGLKLNYLRISEAKLTG-IPKDLPE--TLNELHLDHNKIQAIELEDLLRYSKLYRLGLGH 226
Query: 305 NKLT---GKLFDDLSCNPELGFVDLSSNLLT 332
N++ L P L + L +N L+
Sbjct: 227 NQIRMIENGSLSFL---PTLRELHLDNNKLS 254
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 80.1 bits (198), Expect = 3e-16
Identities = 48/236 (20%), Positives = 74/236 (31%), Gaps = 32/236 (13%)
Query: 75 SITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGL-WGPLSGKISRLSSL 133
S+ +L I N+ + FS L ++ + + L L
Sbjct: 124 SLVELRIHDNRIRKVPKGVFS---------GLRNMNCIEMGGNPLENSGFEPGAFDGLKL 174
Query: 134 EILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNG 193
L +S L IP++L +L L LD N + + L L L L +N
Sbjct: 175 NYLRISEAKLT-GIPKDL--PETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRM 231
Query: 194 TLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKVGKKLVTM 252
S S+L LR L L NN VP L LQV+ L N +
Sbjct: 232 IENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNI-------------T 277
Query: 253 ILSKNKFRSAIPAEVSSYYQLQRLDLSSNR--FVGPFPQALLSLPSITYLNIADNK 306
+ N F + + L +N + P + + + K
Sbjct: 278 KVGVNDFCPVGFGVKRA--YYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 3e-13
Identities = 51/208 (24%), Positives = 81/208 (38%), Gaps = 20/208 (9%)
Query: 156 SLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHF 215
L+ + + L VP + P +L L+NN + D F L++L L L NN
Sbjct: 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKI 90
Query: 216 YGEVPD--FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEV-SSYYQ 272
++ + FS L LQ L + N L P + LV + + N+ R +P V S
Sbjct: 91 -SKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLVELRIHDNRIRK-VPKGVFSGLRN 148
Query: 273 LQRLDLSSNRF-VGPFPQALLSLPSITYLNIADNKLTG---KLFDDLSCNPELGFVDLSS 328
+ +++ N F + YL I++ KLTG L + L+ EL L
Sbjct: 149 MNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIPKDLPETLN---EL---HLDH 202
Query: 329 NLLTGQLPNCLLAGSKNRVVLY-ARNCL 355
N + + L L N +
Sbjct: 203 NKIQ-AIELEDLLRYSKLYRLGLGHNQI 229
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 96.9 bits (241), Expect = 3e-21
Identities = 59/311 (18%), Positives = 110/311 (35%), Gaps = 26/311 (8%)
Query: 6 RFSQCTLLVLAYILLQVNHSEQLQSSQAQTLLRIQGL-----LNNPAVLSSWNITTEFCN 60
S T+ L ++ + S L ++Q L + ++WN
Sbjct: 183 DVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQ 242
Query: 61 TEPTSSLTVVCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLW 120
+++ SI+ + + G S + L L + ++VS
Sbjct: 243 LVWHTTVWYF----SISNVKLQGQLDFRDFDYSGT---------SLKALSIHQVVSDVFG 289
Query: 121 GPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPI 180
P S S++ I N + + S ++ L N+L V + G L
Sbjct: 290 FPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTE 349
Query: 181 LAVLSLRNNMFNGTLPDS---FSYLENLRVLALSNNHFYGEVPD--FSGLTYLQVLDLEN 235
L L L+ N L + +++L+ L +S N + S L L++ +
Sbjct: 350 LETLILQMNQLK-ELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSS 408
Query: 236 NALGP-QFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSL 294
N L F + ++ + L NK +S IP +V LQ L+++SN+ L
Sbjct: 409 NILTDTIFRCLPPRIKVLDLHSNKIKS-IPKQVVKLEALQELNVASNQLKSVPDGIFDRL 467
Query: 295 PSITYLNIADN 305
S+ + + N
Sbjct: 468 TSLQKIWLHTN 478
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 72.2 bits (177), Expect = 3e-13
Identities = 37/225 (16%), Positives = 78/225 (34%), Gaps = 13/225 (5%)
Query: 135 ILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGT 194
+++ S N L +P++LS L + +N ++ + SL L +L + +N
Sbjct: 4 LVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYL 60
Query: 195 LPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNAL-----GPQFPKVGKKL 249
F + + L L LS+N ++ L+ LDL NA +F + +L
Sbjct: 61 DISVFKFNQELEYLDLSHNKL-VKIS-CHPTVNLKHLDLSFNAFDALPICKEFGNM-SQL 117
Query: 250 VTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTG 309
+ LS + ++ + L + + + L ++ T
Sbjct: 118 KFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYG--EKEDPEGLQDFNTESLHIVFPTN 175
Query: 310 KLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNC 354
K F + +L + + L + + + + N
Sbjct: 176 KEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNP 220
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 62.2 bits (151), Expect = 3e-10
Identities = 53/387 (13%), Positives = 120/387 (31%), Gaps = 52/387 (13%)
Query: 27 QLQSSQAQTL--LRIQGLLNNPAVLSSWNITTEFCNTEPTSSLTVVCYEESITQLHIVGN 84
+L L+ L N + I EF +++ + L +
Sbjct: 80 KLVKISCHPTVNLKHLDLSFNA--FDALPICKEF------GNMS------QLKFLGLSTT 125
Query: 85 --KRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLS---SLEILNMS 139
+++ +LP++ S V ++ + L + S I + IL++S
Sbjct: 126 HLEKSSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVS 185
Query: 140 SNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSF 199
+ + + ++LA + S L + N F L
Sbjct: 186 VKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRIL--QL 243
Query: 200 SYLENLRVLALSNNHFYGEVP------DFSGLTYLQVLDLENNALGPQFPKVG-----KK 248
+ + ++SN G++ + L L + + ++ FP+
Sbjct: 244 VWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSN 301
Query: 249 LVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLT 308
+ + + R S LD S+N + L + L + N+L
Sbjct: 302 MNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLK 361
Query: 309 -----GKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLY-ARNCLAAGNENQ 362
++ + L +D+S N ++ + +K+ + L + N L
Sbjct: 362 ELSKIAEMTTQM---KSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRC 418
Query: 363 HP-------LSFCQNEALAVGILPLQK 382
P L + +++ ++ L+
Sbjct: 419 LPPRIKVLDLHSNKIKSIPKQVVKLEA 445
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 61.0 bits (148), Expect = 8e-10
Identities = 43/242 (17%), Positives = 74/242 (30%), Gaps = 26/242 (10%)
Query: 124 SGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAV 183
+ I LS L IL +S N + L+ L L N L + L
Sbjct: 38 TSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVKISCHPTVN---LKH 94
Query: 184 LSLRNNMFNGTLPDS--FSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQ 241
L L N F+ LP F + L+ L LS H + +L + +
Sbjct: 95 LDLSFNAFD-ALPICKEFGNMSQLKFLGLSTTHLEKS--SVLPIAHLNISKVLLVLGETY 151
Query: 242 FPKVG---------KKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALL 292
K + L + + +F + V + L+ ++ L
Sbjct: 152 GEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLS 211
Query: 293 SLPSI------TYLNIADNKLTGKLFDDLSCNP---ELGFVDLSSNLLTGQLPNCLLAGS 343
L + + L + + + T F + + + +S+ L GQL S
Sbjct: 212 ILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYS 271
Query: 344 KN 345
Sbjct: 272 GT 273
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 52.6 bits (126), Expect = 4e-07
Identities = 28/136 (20%), Positives = 54/136 (39%), Gaps = 26/136 (19%)
Query: 105 KLPDLKVLRLVS--LGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQEL-SILTSLQTLI 161
L +L+ L L L ++ +++ SL+ L++S N ++ + S SL +L
Sbjct: 346 HLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLN 405
Query: 162 LDENMLAGRVPDWLGS---------------------LPILAVLSLRNNMFNGTLPD-SF 199
+ N+L + L L L L++ +N ++PD F
Sbjct: 406 MSSNILTDTIFRCLPPRIKVLDLHSNKIKSIPKQVVKLEALQELNVASNQLK-SVPDGIF 464
Query: 200 SYLENLRVLALSNNHF 215
L +L+ + L N +
Sbjct: 465 DRLTSLQKIWLHTNPW 480
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 96.2 bits (240), Expect = 4e-21
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 27/214 (12%)
Query: 127 ISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186
+ S L+I+++ +N L +P SL+ + N L +P+ L +LP L +
Sbjct: 149 LQNSSFLKIIDVDNNSLK-KLPDLP---PSLEFIAAGNNQLE-ELPE-LQNLPFLTAIYA 202
Query: 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVG 246
NN LPD +L + NN E+P+ L +L + +NN L P +
Sbjct: 203 DNNSLK-KLPDL---PLSLESIVAGNNIL-EELPELQNLPFLTTIYADNNLLK-TLPDLP 256
Query: 247 KKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLP-SITYLNIADN 305
L + + N +P S L LD+S N F L LP ++ YLN + N
Sbjct: 257 PSLEALNVRDNYLTD-LPELPQS---LTFLDVSENIF-----SGLSELPPNLYYLNASSN 307
Query: 306 KLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCL 339
++ L D P L +++S+N L +LP
Sbjct: 308 EIR-SLCDLP---PSLEELNVSNNKLI-ELPALP 336
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 80.4 bits (199), Expect = 4e-16
Identities = 45/223 (20%), Positives = 81/223 (36%), Gaps = 31/223 (13%)
Query: 130 LSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNN 189
+ L+ S+ L +P E + S + P G +AV LR+
Sbjct: 10 NTFLQEPLRHSSNLT-EMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDC 68
Query: 190 MFNG------------TLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENN 236
+ +LP+ +L L S N E+P+ L L V +
Sbjct: 69 LDRQAHELELNNLGLSSLPEL---PPHLESLVASCNSL-TELPELPQSLKSLLVDNNNLK 124
Query: 237 ALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPS 296
AL + L + +S N+ +P E+ + L+ +D+ +N P PS
Sbjct: 125 AL----SDLPPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPD---LPPS 174
Query: 297 ITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCL 339
+ ++ +N+L +L P L + +N L +LP+
Sbjct: 175 LEFIAAGNNQLEE--LPELQNLPFLTAIYADNNSLK-KLPDLP 214
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 9e-14
Identities = 36/181 (19%), Positives = 67/181 (37%), Gaps = 21/181 (11%)
Query: 128 SRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLR 187
+L LN SSN + ++ SL+ L + N L +P L L
Sbjct: 294 ELPPNLYYLNASSNEIR-SLCDLP---PSLEELNVSNNKLI-ELPALPPRL---ERLIAS 345
Query: 188 NNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGK 247
N +P+ +NL+ L + N E PD ++ L + ++ + P++ +
Sbjct: 346 FNHLA-EVPEL---PQNLKQLHVEYNPLR-EFPD--IPESVEDLRMNSHLA--EVPELPQ 396
Query: 248 KLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKL 307
L + + N R P S ++ L ++S R V P+ A + + +
Sbjct: 397 NLKQLHVETNPLRE-FPDIPES---VEDLRMNSERVVDPYEFAHETTDKLEDDVFEHHHH 452
Query: 308 T 308
Sbjct: 453 H 453
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 92.8 bits (231), Expect = 3e-20
Identities = 51/289 (17%), Positives = 88/289 (30%), Gaps = 31/289 (10%)
Query: 101 TTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTL 160
+ L + + + L++ +I+ ++ + L ++ L
Sbjct: 15 SNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELL 74
Query: 161 ILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVP 220
L++ + + L + N P F + L VL L N +P
Sbjct: 75 NLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDL-SSLP 133
Query: 221 D--FSGLTYLQVLDLENN---ALGPQFPKVGKKLVTMILSKNKFRSAIPA---------- 265
F L L + NN + + L + LS N+ +
Sbjct: 134 RGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH-VDLSLIPSLFHAN 192
Query: 266 -------EVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCN 318
++ ++ LD S N + L T L + N LT L
Sbjct: 193 VSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVEL---TILKLQHNNLTD--TAWLLNY 247
Query: 319 PELGFVDLSSNLLTGQLPNCLLAGSKNRVVLY-ARNCLAAGNENQHPLS 366
P L VDLS N L ++ + LY + N L A N P+
Sbjct: 248 PGLVEVDLSYNELE-KIMYHPFVKMQRLERLYISNNRLVALNLYGQPIP 295
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 87.8 bits (218), Expect = 1e-18
Identities = 50/249 (20%), Positives = 83/249 (33%), Gaps = 35/249 (14%)
Query: 102 TLVKLPDLKVL-----RLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTS 156
P L L L + +SL+ L +SSN L + LS++ S
Sbjct: 136 IFHNTPKLTTLSMSNNNLERIE-----DDTFQATTSLQNLQLSSNRLT-HVD--LSLIPS 187
Query: 157 LQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFY 216
L + N+L+ L + L +N N + L +L L +N+
Sbjct: 188 LFHANVSYNLLST-----LAIPIAVEELDASHNSIN-VVRGPV--NVELTILKLQHNNL- 238
Query: 217 GEVPDFSGLTYLQVLDLENNAL----GPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQ 272
+ L +DL N L F K+ ++L + +S N+ + +
Sbjct: 239 TDTAWLLNYPGLVEVDLSYNELEKIMYHPFVKM-QRLERLYISNNRLVA-LNLYGQPIPT 296
Query: 273 LQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLT 332
L+ LDLS N + + + L + N + L + LS N
Sbjct: 297 LKVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIVTLKLSTH---HTLKNLTLSHNDWD 352
Query: 333 GQLPNCLLA 341
N L A
Sbjct: 353 ---CNSLRA 358
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 69.7 bits (171), Expect = 1e-12
Identities = 28/171 (16%), Positives = 57/171 (33%), Gaps = 14/171 (8%)
Query: 171 VPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD--FSGLTYL 228
+ L + + + + L N +++ N+ ++P +
Sbjct: 13 IDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTM-RKLPAALLDSFRQV 71
Query: 229 QVLDLENNALG---PQFPKVGKKLVTMILSKNKFRSAIPAEV-SSYYQLQRLDLSSNRFV 284
++L+L + + + + + N R +P V + L L L N
Sbjct: 72 ELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRY-LPPHVFQNVPLLTVLVLERNDLS 130
Query: 285 GPFPQALLSLPSITYLNIADNKLT---GKLFDDLSCNPELGFVDLSSNLLT 332
+ P +T L++++N L F L + LSSN LT
Sbjct: 131 SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQAT---TSLQNLQLSSNRLT 178
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 93.1 bits (231), Expect = 7e-20
Identities = 44/262 (16%), Positives = 96/262 (36%), Gaps = 24/262 (9%)
Query: 126 KISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLS 185
K ++ L ++ L+ ++P + + L + +N L +P+ SL L
Sbjct: 54 KECLINQFSELQLNRLNLS-SLPDN--LPPQITVLEITQNAL-ISLPELPASLE---YLD 106
Query: 186 LRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKV 245
+N + TLP+ + +L+ L + NN +P+ L+ ++ +NN L P++
Sbjct: 107 ACDNRLS-TLPELPA---SLKHLDVDNNQL-TMLPE--LPALLEYINADNNQLT-MLPEL 158
Query: 246 GKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVG--PFPQALLSLPS-ITYLNI 302
L + + N+ +P S L+ LD+S+N P +
Sbjct: 159 PTSLEVLSVRNNQLTF-LPELPES---LEALDVSTNLLESLPAVPVRNHHSEETEIFFRC 214
Query: 303 ADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAAGNENQ 362
+N++T + +++ + L N L+ L+ + + + ++ Q
Sbjct: 215 RENRIT-HIPENILSLDPTCTIILEDNPLS-SRIRESLSQQTAQPDYHGPRIYFSMSDGQ 272
Query: 363 HPLSFCQNEALAVGILPLQKKQ 384
P K+
Sbjct: 273 QNTLHRPLADAVTAWFPENKQS 294
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 65.0 bits (158), Expect = 5e-11
Identities = 39/169 (23%), Positives = 66/169 (39%), Gaps = 21/169 (12%)
Query: 178 LPILAVLSLRNNMFNGTLP----DSFSYLENLRVLALSNNHF--YGEVPDFSGLTYLQVL 231
LPI SL N F T+ D FS + AL + + + L
Sbjct: 5 LPINNNFSLSQNSFYNTISGTYADYFSAWDKWEKQALPGENRNEAVSLLKECLINQFSEL 64
Query: 232 DLENNALGPQFPK-VGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQA 290
L L P + ++ + +++N S +P + L+ LD NR P+
Sbjct: 65 QLNRLNL-SSLPDNLPPQITVLEITQNALIS-LPELPA---SLEYLDACDNRLST-LPEL 118
Query: 291 LLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCL 339
SL +L++ +N+LT + +L L +++ +N LT LP
Sbjct: 119 PASL---KHLDVDNNQLT--MLPELPAL--LEYINADNNQLT-MLPELP 159
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 87.3 bits (216), Expect = 9e-19
Identities = 43/194 (22%), Positives = 70/194 (36%), Gaps = 15/194 (7%)
Query: 106 LPDLKVLRL--VSLGLWGPLSGKISRLS--SLEILNMSSNFLNGAIPQELSILTSLQTLI 161
PDL +L L VS ++ + L++L+++ +++ + +L TL
Sbjct: 120 GPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLD 179
Query: 162 LDENMLAGRVPDW----LGSLPILAVLSLRNNMFN---GTLPDSFSYLENLRVLALSNNH 214
L +N G P L VL+LRN G + L+ L LS+N
Sbjct: 180 LSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNS 239
Query: 215 FYGEVPD--FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQ 272
+ L L+L L + KL + LS N+ P+ Q
Sbjct: 240 LRDAAGAPSCDWPSQLNSLNLSFTGLKQVPKGLPAKLSVLDLSYNRLDR-NPSP-DELPQ 297
Query: 273 LQRLDLSSNRFVGP 286
+ L L N F+
Sbjct: 298 VGNLSLKGNPFLDS 311
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 86.1 bits (213), Expect = 2e-18
Identities = 64/306 (20%), Positives = 96/306 (31%), Gaps = 40/306 (13%)
Query: 46 PAVLSSWNITTEFCNTEPTSSLTVVCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVK 105
P L + + F + +P S C + +L+ G +L +
Sbjct: 5 PCELDEESCSCNFSDPKPDWSSAFNCLGAADVELYGGGRSLEYLLKRVDTEADLGQFTDI 64
Query: 106 LPDLKVLRLVSLGLWGPLSG-----KISRLSSLEILNMSSNFLNGAIPQELSILT--SLQ 158
+ L + RL P ++ +S L+ L + + + G P L T L
Sbjct: 65 IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLN 124
Query: 159 TLILDENMLAGRVPDWLGSLPI-----LAVLSLRNNMFNGTLPDSFSYLENLRVLALSNN 213
L L A R WL L L VLS+ + L L LS+N
Sbjct: 125 ILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDN 183
Query: 214 HFYGEVP-----DFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVS 268
GE LQVL L N + A +
Sbjct: 184 PELGERGLISALCPLKFPTLQVLALRNAGM------------------ETPSGVCSALAA 225
Query: 269 SYYQLQRLDLSSNRFVG-PFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLS 327
+ QLQ LDLS N + + LN++ L ++ L +L +DLS
Sbjct: 226 ARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLS 282
Query: 328 SNLLTG 333
N L
Sbjct: 283 YNRLDR 288
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 67.6 bits (165), Expect = 3e-12
Identities = 36/206 (17%), Positives = 67/206 (32%), Gaps = 21/206 (10%)
Query: 160 LILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLEN---LRVLALSNNHFY 216
+D G+ D + SL + L++R + + L+ L L N
Sbjct: 50 KRVDTEADLGQFTDIIKSLSLKR-LTVRAARIPSRILFGALRVLGISGLQELTLENLEVT 108
Query: 217 GEVPD---FSGLTYLQVLDLENNALGPQ-------FPKVGKKLVTMILSKNKFRSAIPAE 266
G P + L +L+L N + + + L + +++ + +
Sbjct: 109 GTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQ 168
Query: 267 VSSYYQLQRLDLSSNRFVGPFP----QALLSLPSITYLNIADNKLT---GKLFDDLSCNP 319
V + L LDLS N +G L P++ L + + + G +
Sbjct: 169 VRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARV 228
Query: 320 ELGFVDLSSNLLTGQLPNCLLAGSKN 345
+L +DLS N L
Sbjct: 229 QLQGLDLSHNSLRDAAGAPSCDWPSQ 254
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 45.3 bits (107), Expect = 4e-05
Identities = 29/179 (16%), Positives = 52/179 (29%), Gaps = 27/179 (15%)
Query: 166 MLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGE----VPD 221
+ A V + G + +L + + +L+ L +
Sbjct: 31 LGAADVELYGGGRSLEYLLKRVDTEADLGQFTDIIKSLSLKRLTVRAARIPSRILFGALR 90
Query: 222 FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSN 281
G++ LQ L LEN + P P ++ L L+L +
Sbjct: 91 VLGISGLQELTLENLEVTGTAP-------------------PPLLEATGPDLNILNLRNV 131
Query: 282 RFVGPFPQAL----LSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLP 336
+ P + L+IA + + P L +DLS N G+
Sbjct: 132 SWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERG 190
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 89.6 bits (222), Expect = 9e-19
Identities = 54/309 (17%), Positives = 94/309 (30%), Gaps = 31/309 (10%)
Query: 81 IVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSS 140
+ G +R + P + L + + + L++ +I+ +
Sbjct: 1 VGGQQRYNVKPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKN 60
Query: 141 NFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFS 200
+ + L ++ L L++ + + L + N P F
Sbjct: 61 STMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQ 120
Query: 201 YLENLRVLALSNNHFYGEVPD--FSGLTYLQVLDLENN---ALGPQFPKVGKKLVTMILS 255
+ L VL L N +P F L L + NN + + L + LS
Sbjct: 121 NVPLLTVLVLERNDL-SSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLS 179
Query: 256 KNKFRSAIPA-----------------EVSSYYQLQRLDLSSNRFVGPFPQALLSLPSIT 298
N+ + ++ ++ LD S N + L T
Sbjct: 180 SNRLTH-VDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVEL---T 235
Query: 299 YLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLY-ARNCLAA 357
L + N LT L P L VDLS N L ++ + LY + N L A
Sbjct: 236 ILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELE-KIMYHPFVKMQRLERLYISNNRLVA 292
Query: 358 GNENQHPLS 366
N P+
Sbjct: 293 LNLYGQPIP 301
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 86.5 bits (214), Expect = 1e-17
Identities = 51/253 (20%), Positives = 85/253 (33%), Gaps = 35/253 (13%)
Query: 102 TLVKLPDLKVL-----RLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTS 156
P L L L + +SL+ L +SSN L + LS++ S
Sbjct: 142 IFHNTPKLTTLSMSNNNLERIE-----DDTFQATTSLQNLQLSSNRLT-HVD--LSLIPS 193
Query: 157 LQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFY 216
L + N+L+ L + L +N N + L +L L +N+
Sbjct: 194 LFHANVSYNLLS-----TLAIPIAVEELDASHNSIN-VVRGPV--NVELTILKLQHNNL- 244
Query: 217 GEVPDFSGLTYLQVLDLENNAL----GPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQ 272
+ L +DL N L F K+ ++L + +S N+ + +
Sbjct: 245 TDTAWLLNYPGLVEVDLSYNELEKIMYHPFVKM-QRLERLYISNNRLVA-LNLYGQPIPT 302
Query: 273 LQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLT 332
L+ LDLS N + + + L + N + L + LS N
Sbjct: 303 LKVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIVTLKLSTH---HTLKNLTLSHNDWD 358
Query: 333 GQLPNCLLAGSKN 345
N L A +N
Sbjct: 359 ---CNSLRALFRN 368
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 87.6 bits (217), Expect = 4e-18
Identities = 46/214 (21%), Positives = 80/214 (37%), Gaps = 28/214 (13%)
Query: 126 KISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLS 185
+ + +LN+ + L +P + + TL++ +N L +P L L
Sbjct: 35 RACLNNGNAVLNVGESGLT-TLPDC--LPAHITTLVIPDNNLT-SLPALPPEL---RTLE 87
Query: 186 LRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKV 245
+ N +LP L L + + H + L L + N L P +
Sbjct: 88 VSGNQLT-SLPVLPPGLLELSIFSNPLTHLPAL------PSGLCKLWIFGNQLT-SLPVL 139
Query: 246 GKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADN 305
L + +S N+ S +PA S +L +L +N+ P + L+++DN
Sbjct: 140 PPGLQELSVSDNQLAS-LPALPS---ELCKLWAYNNQLTS-LPM---LPSGLQELSVSDN 191
Query: 306 KLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCL 339
+L L S EL + +N LT LP
Sbjct: 192 QLA-SLPTLPS---ELYKLWAYNNRLT-SLPALP 220
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 83.4 bits (206), Expect = 1e-16
Identities = 53/244 (21%), Positives = 87/244 (35%), Gaps = 24/244 (9%)
Query: 130 LSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNN 189
L+ L++S N L ++P S L L N L +P L LS+ +N
Sbjct: 140 PPGLQELSVSDNQLA-SLPALPS---ELCKLWAYNNQLT-SLPMLPSGL---QELSVSDN 191
Query: 190 MFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKL 249
+LP S L L NN +P + L+ L + N L P + +L
Sbjct: 192 QLA-SLPTLPSELYKLW---AYNNRLT-SLPAL--PSGLKELIVSGNRLT-SLPVLPSEL 243
Query: 250 VTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTG 309
+++S N+ S +P S L L + N+ P++L+ L S T +N+ N L+
Sbjct: 244 KELMVSGNRLTS-LPMLPS---GLLSLSVYRNQLTR-LPESLIHLSSETTVNLEGNPLSE 298
Query: 310 KLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAAGNENQHPLSFCQ 369
+ L E+ S + A + R + A P +
Sbjct: 299 R---TLQALREITSAPGYSGPIIRFDMAGASAPRETRALHLAAADWLVPAREGEPAPADR 355
Query: 370 NEAL 373
Sbjct: 356 WHMF 359
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 60.7 bits (147), Expect = 1e-09
Identities = 30/140 (21%), Positives = 51/140 (36%), Gaps = 19/140 (13%)
Query: 103 LVKLPDLKVLRLVSLGLWGPLSGKISRL----SSLEILNMSSNFLNGAIPQELSILTSLQ 158
L LP L L L + +++ L S L+ L +S N L ++P + L+
Sbjct: 193 LASLPTL-PSELYKLWA---YNNRLTSLPALPSGLKELIVSGNRLT-SLPVLP---SELK 244
Query: 159 TLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGE 218
L++ N L +P L LS+ N LP+S +L + + L N
Sbjct: 245 ELMVSGNRLT-SLPMLPSGLL---SLSVYRNQLT-RLPESLIHLSSETTVNLEGNPL--S 297
Query: 219 VPDFSGLTYLQVLDLENNAL 238
L + + +
Sbjct: 298 ERTLQALREITSAPGYSGPI 317
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 87.2 bits (216), Expect = 6e-18
Identities = 48/305 (15%), Positives = 99/305 (32%), Gaps = 20/305 (6%)
Query: 7 FSQCTLLVLAYILLQVNHSEQLQSSQAQTLLRIQGLLNNPAVLSSWNITTEFCNTEPTSS 66
+ L L+ I L + ++L + ++ L + + + +
Sbjct: 217 VNALGHLQLSNIKLNDENCQRLMTFLSELTRGPT--------LLNVTLQHIETTWKCSVK 268
Query: 67 LTVVCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGK 126
L + + L+I + + F + L L + + +
Sbjct: 269 LFQFFWPRPVEYLNIYNLT----ITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEAL 324
Query: 127 ISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186
S + + I +S + +S L +N+ V +L L L L
Sbjct: 325 YSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLIL 384
Query: 187 RNNMFNGTLPDSFSYLENLRVLALSNNHF----YGEVPD-FSGLTYLQVLDLENNALGPQ 241
+ N +N+ L + + + VL+L +N L
Sbjct: 385 QRNGLK-NFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGS 443
Query: 242 -FPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYL 300
F + K+ + L N+ +IP +V+ LQ L+++SN+ L S+ Y+
Sbjct: 444 VFRCLPPKVKVLDLHNNRI-MSIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYI 502
Query: 301 NIADN 305
+ DN
Sbjct: 503 WLHDN 507
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 78.4 bits (193), Expect = 3e-15
Identities = 42/277 (15%), Positives = 90/277 (32%), Gaps = 20/277 (7%)
Query: 76 ITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEI 135
T LH+V + + + +M ++L ++K+ L LS + L +
Sbjct: 196 TTVLHLVFHPN-SLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNV 254
Query: 136 LNMSSNFLNGAIPQELSIL--TSLQTLILDENMLAGRVPD-----WLGSLPILAVLSLRN 188
+ ++ L + + R+ +L L + ++N
Sbjct: 255 TLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKN 314
Query: 189 NMFNGTLPDSFSYLENLRVLALSNNHFYG-EVPDFSGLTYLQVLDLENNALGPQFPKVGK 247
+F + +S + + LS + + + L+ N +
Sbjct: 315 QVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCS 374
Query: 248 KLV---TMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFV----GPFPQALLSLPSITYL 300
L T+IL +N ++ + L+ + + SI L
Sbjct: 375 TLKRLQTLILQRNGLKN-FFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVL 433
Query: 301 NIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPN 337
N++ N LTG +F L + +DL +N + +P
Sbjct: 434 NLSSNMLTGSVFRCLPPK--VKVLDLHNNRIM-SIPK 467
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 51.8 bits (124), Expect = 6e-07
Identities = 40/224 (17%), Positives = 76/224 (33%), Gaps = 60/224 (26%)
Query: 119 LWGPLSGKISRLS--SLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLG 176
+ G ++ S +++ S+ L +P++ + + L L +N ++
Sbjct: 17 ALALIVGSMTPFSNELESMVDYSNRNLT-HVPKD--LPPRTKALSLSQNSIS-------- 65
Query: 177 SLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD--FSGLTYLQVLDLE 234
L S+L LRVL LS+N + F L+ LD+
Sbjct: 66 ELR----------------MPDISFLSELRVLRLSHNRI-RSLDFHVFLFNQDLEYLDVS 108
Query: 235 NNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRF-VGPFPQALLS 293
+N L I + L+ LDLS N F V P + +
Sbjct: 109 HNRL----------------------QNISCCPMA--SLRHLDLSFNDFDVLPVCKEFGN 144
Query: 294 LPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPN 337
L +T+L ++ K ++ L + +L++ +
Sbjct: 145 LTKLTFLGLSAAKFRQLDLLPVA---HLHLSCILLDLVSYHIKG 185
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 49.5 bits (118), Expect = 3e-06
Identities = 41/282 (14%), Positives = 88/282 (31%), Gaps = 55/282 (19%)
Query: 103 LVKLPDLKVLRLVSLGLWG------PLSGKISRLSSLEILNMSSNFLNGAIPQELSILTS 156
L + + L L L P+ + L+ L L +S+ +L +
Sbjct: 112 LQNISCCPMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ---LDLLPVAH 168
Query: 157 LQTLILDENMLAGRVPD------WLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLAL 210
L + ++++ + + + +L ++ N++F+ + S + L +L++ +
Sbjct: 169 LHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNI 228
Query: 211 SNNHFYGEVPD--------------------------------FSGLTYLQVLDLENNAL 238
N + F ++ L++ N +
Sbjct: 229 KLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTI 288
Query: 239 GPQFPKVG--------KKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQA 290
+ + K L+ + F + A S + ++ LS +
Sbjct: 289 TERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVC 348
Query: 291 LLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLT 332
S S T+LN N T +F S L + L N L
Sbjct: 349 PPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLK 390
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 47.9 bits (114), Expect = 9e-06
Identities = 26/116 (22%), Positives = 52/116 (44%), Gaps = 9/116 (7%)
Query: 105 KLPDLKVLRLVSLGL----WGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTL 160
++ L + + L + S+ +LN+SSN L G++ + L ++ L
Sbjct: 398 MTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVL 455
Query: 161 ILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPD-SFSYLENLRVLALSNNHF 215
L N + +P + L L L++ +N ++PD F L +L+ + L +N +
Sbjct: 456 DLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPW 509
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 41.8 bits (98), Expect = 7e-04
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Query: 254 LSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFD 313
LS+N ++S +L+ L LS NR L + YL+++ N+L
Sbjct: 59 LSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQNISCC 118
Query: 314 DLSCNPELGFVDLSSNLLTGQLPNC 338
++ L +DLS N LP C
Sbjct: 119 PMA---SLRHLDLSFNDFD-VLPVC 139
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 84.8 bits (210), Expect = 9e-18
Identities = 51/243 (20%), Positives = 91/243 (37%), Gaps = 19/243 (7%)
Query: 114 LVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPD 173
++SL + I SS LN +IP L+ ++++L L N +
Sbjct: 14 IISLSKEESSNQASLSCDRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNS 70
Query: 174 WLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD--FSGLTYLQVL 231
L L L L +N N DSFS L +L L LS N+ + F L+ L L
Sbjct: 71 DLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYL-SNLSSSWFKPLSSLTFL 129
Query: 232 DLENNAL-----GPQFPKVGKKLVTMILSKNKFRSAIPAEV-SSYYQLQRLDLSSNRFVG 285
+L N F + KL + + + I + + L+ L++ ++
Sbjct: 130 NLLGNPYKTLGETSLFSHL-TKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQS 188
Query: 286 PFPQALLSLPSITYLNIADNKLT---GKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAG 342
P++L S+ ++++L + + D + ++L L + L G
Sbjct: 189 YEPKSLKSIQNVSHLILHMKQHILLLEIFVDVT---SSVECLELRDTDLDTFHFSELSTG 245
Query: 343 SKN 345
N
Sbjct: 246 ETN 248
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 82.1 bits (203), Expect = 6e-17
Identities = 41/222 (18%), Positives = 75/222 (33%), Gaps = 27/222 (12%)
Query: 128 SRLSSLEILNMSSNFLNGAIPQEL-SILTSLQTLILDENMLAGRVPD--WLGSLPILAVL 184
S L SLE L++S N+L + L+SL L L N + + L L +L
Sbjct: 97 SSLGSLEHLDLSYNYL-SNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQIL 154
Query: 185 SLRNNMFNGTLPD-SFSYLENLRVLALSNNHFYGEVPD--FSGLTYLQVLDLENN---AL 238
+ N + F+ L L L + + + + L L L
Sbjct: 155 RVGNMDTFTKIQRKDFAGLTFLEELEIDASDL-QSYEPKSLKSIQNVSHLILHMKQHILL 213
Query: 239 GPQFPKVGKKLVTMILSKNKFRSAIPAEVSS--------YYQLQRLDLSSNRFVGPFPQA 290
F V + + L + +E+S+ + + + ++ +
Sbjct: 214 LEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLF-QVMKL 272
Query: 291 LLSLPSITYLNIADNKLTG---KLFDDLSCNPELGFVDLSSN 329
L + + L + N+L +FD L L + L +N
Sbjct: 273 LNQISGLLELEFSRNQLKSVPDGIFDRL---TSLQKIWLHTN 311
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 72.8 bits (179), Expect = 8e-14
Identities = 38/200 (19%), Positives = 72/200 (36%), Gaps = 23/200 (11%)
Query: 102 TLVKLPDLKVLRL-----VSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQE-LSILT 155
L L L L +LG S L+ L+IL + + I ++ + LT
Sbjct: 119 WFKPLSSLTFLNLLGNPYKTLGETSLFSH----LTKLQILRVGNMDTFTKIQRKDFAGLT 174
Query: 156 SLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHF 215
L+ L +D + L P L S+ ++ L L L ++ L L +
Sbjct: 175 FLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDL 234
Query: 216 Y---------GEVPDFSGLTYLQVLDLENNAL--GPQFPKVGKKLVTMILSKNKFRSAIP 264
GE + + + + +L + L+ + S+N+ +S +P
Sbjct: 235 DTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKS-VP 293
Query: 265 AEV-SSYYQLQRLDLSSNRF 283
+ LQ++ L +N +
Sbjct: 294 DGIFDRLTSLQKIWLHTNPW 313
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 51.7 bits (124), Expect = 5e-07
Identities = 23/123 (18%), Positives = 42/123 (34%), Gaps = 9/123 (7%)
Query: 102 TLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSI-------- 153
+L + ++ L L L + SS+E L + L+ ELS
Sbjct: 193 SLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIK 252
Query: 154 LTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNN 213
+ + + + + L +V L + L L N F L +L+ + L N
Sbjct: 253 KFTFRNVKITDESLF-QVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTN 311
Query: 214 HFY 216
+
Sbjct: 312 PWD 314
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 82.7 bits (205), Expect = 2e-17
Identities = 40/192 (20%), Positives = 71/192 (36%), Gaps = 12/192 (6%)
Query: 124 SGKISRLSSLEILNMSSNFLNGAIPQEL-SILTSLQTLILDENMLAGRVPDWLGSLPILA 182
S L++L++S + I L+ L TLIL N + L L
Sbjct: 45 SYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQ 103
Query: 183 VLSLRNNMFNGTLPDSFSYLENLRVLALSNNHF-YGEVPD-FSGLTYLQVLDLENNALG- 239
L +L+ L+ L +++N ++P+ FS LT L+ LDL +N +
Sbjct: 104 KLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163
Query: 240 ------PQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLS 293
++ +++ LS N I +L+ L L +N+
Sbjct: 164 IYCTDLRVLHQMPLLNLSLDLSLNPMNF-IQPGAFKEIRLKELALDTNQLKSVPDGIFDR 222
Query: 294 LPSITYLNIADN 305
L S+ + + N
Sbjct: 223 LTSLQKIWLHTN 234
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 4e-13
Identities = 41/195 (21%), Positives = 67/195 (34%), Gaps = 33/195 (16%)
Query: 146 AIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENL 205
IP ++ S + L L N L S P L VL L ++ L +L
Sbjct: 21 KIPD--NLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHL 78
Query: 206 RVLALSNNHFYGEVPD--FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAI 263
L L+ N + FSGL+ LQ L L +++
Sbjct: 79 STLILTGNPI-QSLALGAFSGLSSLQKLVAVETNL----------------------ASL 115
Query: 264 PAEV-SSYYQLQRLDLSSNRF-VGPFPQALLSLPSITYLNIADNKLT---GKLFDDLSCN 318
L+ L+++ N P+ +L ++ +L+++ NK+ L
Sbjct: 116 ENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 175
Query: 319 PELGFV-DLSSNLLT 332
P L DLS N +
Sbjct: 176 PLLNLSLDLSLNPMN 190
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 83.2 bits (206), Expect = 7e-17
Identities = 50/234 (21%), Positives = 80/234 (34%), Gaps = 20/234 (8%)
Query: 100 VTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQT 159
+ + + + +L++L L+ ++ + + + LT L
Sbjct: 11 FNDWFPDDNFASEVAAAFEMQATDTISEEQLATLTSLDCHNSSIT-DMT-GIEKLTGLTK 68
Query: 160 LILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEV 219
LI N + + L L L+ +N L + L L L N
Sbjct: 69 LICTSNNITT-LD--LSQNTNLTYLACDSNKLT-NLD--VTPLTKLTYLNCDTNKL--TK 120
Query: 220 PDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLS 279
D S L L+ N L +L + NK + + V+ QL LD S
Sbjct: 121 LDVSQNPLLTYLNCARNTLTEIDVSHNTQLTELDCHLNKKITKLD--VTPQTQLTTLDCS 178
Query: 280 SNRFVG-PFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLT 332
N+ Q + LN N +T DL+ N +L F+D SSN LT
Sbjct: 179 FNKITELDVSQ----NKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLT 225
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 75.1 bits (185), Expect = 2e-14
Identities = 44/235 (18%), Positives = 72/235 (30%), Gaps = 41/235 (17%)
Query: 127 ISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186
++ L+ L LN +N L + +S L L N L + + L L
Sbjct: 102 VTPLTKLTYLNCDTNKLT-KLD--VSQNPLLTYLNCARNTLT-EID--VSHNTQLTELDC 155
Query: 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVG 246
N + L L S N D S L L+ + N + +
Sbjct: 156 HLN--KKITKLDVTPQTQLTTLDCSFNKITEL--DVSQNKLLNRLNCDTNNI--TKLDLN 209
Query: 247 K--KLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRF----VGPFPQ----------- 289
+ +L + S NK +V+ QL D S N V +
Sbjct: 210 QNIQLTFLDCSSNKLTE---IDVTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDL 266
Query: 290 ---ALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLT----GQLPN 337
L + Y + +L D++ N +L +D + +T Q P
Sbjct: 267 LEIDLTHNTQLIYFQAEGCRKIKEL--DVTHNTQLYLLDCQAAGITELDLSQNPK 319
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 67.8 bits (166), Expect = 5e-12
Identities = 45/294 (15%), Positives = 87/294 (29%), Gaps = 46/294 (15%)
Query: 71 CYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRL 130
C ++T++ + N + L + + L L + +S+
Sbjct: 134 CARNTLTEIDVSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKI---TELDVSQN 190
Query: 131 SSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNM 190
L LN +N + + L+ L L N L + + L L N
Sbjct: 191 KLLNRLNCDTNNIT-KLD--LNQNIQLTFLDCSSNKLT-EID--VTPLTQLTYFDCSVNP 244
Query: 191 FNGTLPDS-------------------FSYLENLRVLALSNNHFYGEVPDFSGLTYLQVL 231
L S ++ L + D + T L +L
Sbjct: 245 LT-ELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQAEGCRKI-KELDVTHNTQLYLL 302
Query: 232 DLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQAL 291
D + + KLV + L+ + + VS +L+ L + F ++
Sbjct: 303 DCQAAGITELDLSQNPKLVYLYLNNTELTE-LD--VSHNTKLKSLSCVNAHIQD-FS-SV 357
Query: 292 LSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKN 345
+P++ A+ + + L++N LT + LL N
Sbjct: 358 GKIPALNNNFEAEGQTI-----------TMPKETLTNNSLTIAVSPDLLDQFGN 400
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 79.7 bits (197), Expect = 2e-16
Identities = 45/305 (14%), Positives = 106/305 (34%), Gaps = 62/305 (20%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVA---IRCLKMKKCHSTRNFMHHIELISKLRH 532
+F+ +G G G ++ + K + A IR + + M ++ ++KL H
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNREL--AREKVMREVKALAKLEH 62
Query: 533 RHLVSALGHCFECYFDDSSVSR---------IFLIFEYVPNGTLRSWISEGHAHQSLTWT 583
+V F + + ++ + +++ + L+ W++ + +
Sbjct: 63 PGIV----RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERS 118
Query: 584 QRISAAIGVAKGIQFLHTGIVPGVFSNN-----LKITDILLDQNLVAKISSYNLPLLAEN 638
+ + +A+ ++FLH S LK ++I + V K+ + L +
Sbjct: 119 VCLHIFLQIAEAVEFLH--------SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQ 170
Query: 639 AEKVGHVIPYSGSIDPTNSARG--------KLE-----EKIDIYDFGLILLEIIVGRPLK 685
E+ V+ + G ++ K+DI+ GLIL E++ P
Sbjct: 171 DEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY--PFS 228
Query: 686 SRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPS 745
++ E ++ + ++ + L +P ERP
Sbjct: 229 TQMERVRTLTDVRNLKFPPLFTQKY---------------PCEYVMVQDMLSPSPMERPE 273
Query: 746 VEDVL 750
+++
Sbjct: 274 AINII 278
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 77.0 bits (190), Expect = 2e-15
Identities = 54/311 (17%), Positives = 114/311 (36%), Gaps = 69/311 (22%)
Query: 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRH 534
++F+ A +G+G+ GQ+ + R + + AI+ ++ + + + L++ L H++
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQY 63
Query: 535 LVSALGHCFECYFDDS----------SVSRIFLIFEYVPNGTLRSWISEGHAH----QSL 580
+V + + + S +F+ EY NGTL I + + +
Sbjct: 64 VV----RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW 119
Query: 581 TWTQRISAAIGVAKGIQFLHTGIVPGVFSNN-----LKITDILLDQNLVAKIS----SYN 631
++I + + ++H S LK +I +D++ KI + N
Sbjct: 120 RLFRQI------LEALSYIH--------SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKN 165
Query: 632 LPLLAENAEKVGHVIPYSGSIDPTN------------SARGKLEEKIDIYDFGLILLEII 679
+ + + +P S + G EKID+Y G+I E+I
Sbjct: 166 VHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
Query: 680 VGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN 739
P + E + +L+ S+ P + K ++ + +
Sbjct: 226 --YPFSTGMERVNILKKLR---------SVSIEFPPDFDDNKMKVEKKIIR---LLIDHD 271
Query: 740 PAERPSVEDVL 750
P +RP +L
Sbjct: 272 PNKRPGARTLL 282
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 76.7 bits (189), Expect = 2e-15
Identities = 45/187 (24%), Positives = 68/187 (36%), Gaps = 18/187 (9%)
Query: 154 LTSLQTLILDENMLAGRVPDWLGSLPI-LAVLSLRNNMFNGTLPDSFSYLENLRVLALSN 212
+ S + D+ L +P LP +L L N+ + L L L
Sbjct: 9 VASHLEVNCDKRNLT-ALPP---DLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDR 64
Query: 213 NHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGK---KLVTMILSKNKFRSAIPAEV-S 268
++ L L LDL +N L P +G+ L + +S N+ S +P
Sbjct: 65 AEL-TKLQVDGTLPVLGTLDLSHNQL-QSLPLLGQTLPALTVLDVSFNRLTS-LPLGALR 121
Query: 269 SYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLT---GKLFDDLSCNPELGFVD 325
+LQ L L N P L P + L++A+N LT L + L L +
Sbjct: 122 GLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGL---ENLDTLL 178
Query: 326 LSSNLLT 332
L N L
Sbjct: 179 LQENSLY 185
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 54.0 bits (130), Expect = 7e-08
Identities = 49/176 (27%), Positives = 60/176 (34%), Gaps = 16/176 (9%)
Query: 75 SITQLHIVGNKRAPMLPLSFSMDSFVTTLV-------------KLPDLKVLRLVSLGLWG 121
T LH+ N + + +T L LP L L L L
Sbjct: 32 DTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTLDLSHNQLQS 91
Query: 122 PLSGKISRLSSLEILNMSSNFLNGAIPQEL-SILTSLQTLILDENMLAGRVPDWLGSLPI 180
L L +L +L++S N L ++P L LQ L L N L P L P
Sbjct: 92 -LPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPK 149
Query: 181 LAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENN 236
L LSL NN + LENL L L N Y F G L L N
Sbjct: 150 LEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGN 205
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 78.3 bits (193), Expect = 3e-15
Identities = 72/281 (25%), Positives = 117/281 (41%), Gaps = 49/281 (17%)
Query: 486 GEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFEC 545
G+G G+++ G T VAI+ LK S F+ +++ KLRH LV E
Sbjct: 193 GQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 250
Query: 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVP 605
I+++ EY+ G+L ++ + L Q + A +A G+ ++
Sbjct: 251 -------EPIYIVTEYMSKGSLLDFLKG-ETGKYLRLPQLVDMAAQIASGMAYVE----- 297
Query: 606 GVFSNN-----LKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNS 657
N L+ +IL+ +NLV K++ + L L E+ E + G P + P +
Sbjct: 298 ---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTA-PEAA 353
Query: 658 ARGKLEEKIDIYDFGLILLEII-VGR---PLKSRKEVDLLKNQLQAVVTADESARRSMVD 713
G+ K D++ FG++L E+ GR P +EV L V E R M
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV------LDQV----ERGYR-MPC 402
Query: 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754
P C + M +C K P ERP+ E + L+
Sbjct: 403 P---PECPESLHDLMC----QCWRKEPEERPTFEYLQAFLE 436
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 78.3 bits (193), Expect = 3e-15
Identities = 59/282 (20%), Positives = 112/282 (39%), Gaps = 49/282 (17%)
Query: 486 GEGSQGQMYRGRLKN-GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
G G G++Y G K VA++ LK + F+ ++ +++H +LV LG C
Sbjct: 229 GGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 287
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
++I E++ G L ++ E Q ++ + A ++ +++L
Sbjct: 288 EP-------PFYIITEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLE---- 335
Query: 605 PGVFSNN-----LKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTN 656
N L + L+ +N + K++ + L L G P + P +
Sbjct: 336 ----KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT-APES 390
Query: 657 SARGKLEEKIDIYDFGLILLEII-VGR---PLKSRKEVDLLKNQLQAVVTADESARRSMV 712
A K K D++ FG++L EI G P +V + + E R M
Sbjct: 391 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV------YELL----EKDYR-ME 439
Query: 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754
P + C ++ + +M C + NP++RPS ++ +
Sbjct: 440 RP---EGCPEK-VYELMRACWQ---WNPSDRPSFAEIHQAFE 474
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 75.9 bits (187), Expect = 5e-15
Identities = 49/296 (16%), Positives = 107/296 (36%), Gaps = 41/296 (13%)
Query: 486 GEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
GEG + L +G F A++ + + ++ H +++ + +C
Sbjct: 38 GEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLR 97
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHA-HQSLTWTQRISAAIGVAKGIQFLHTGI 603
+ + +L+ + GTL + I LT Q + +G+ +G++ +H
Sbjct: 98 ---ERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA-- 152
Query: 604 VPGVFSNNLKITDILLDQNLVAKI-------SSYNLPLLAENAEKVGHVIPYSGSID--- 653
G +LK T+ILL + + + A + +I
Sbjct: 153 -KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRA 211
Query: 654 P---TNSARGKLEEKIDIYDFGLILLEIIVGRP--LKSRKEVDLLKNQLQAVVTADESAR 708
P + + ++E+ D++ G +L ++ G ++ D + +Q ++ +S R
Sbjct: 212 PELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPR 271
Query: 709 RSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL---WNLQFAAQVQD 761
S +L ++ + +P +RP + +L LQ A Q
Sbjct: 272 HS------------SALWQLLN---SMMTVDPHQRPHIPLLLSQLEALQPPAPGQH 312
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 76.8 bits (189), Expect = 9e-15
Identities = 72/281 (25%), Positives = 117/281 (41%), Gaps = 49/281 (17%)
Query: 486 GEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFEC 545
G+G G+++ G T VAI+ LK S F+ +++ KLRH LV E
Sbjct: 276 GQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 333
Query: 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVP 605
I+++ EY+ G+L ++ + L Q + A +A G+ ++
Sbjct: 334 -------EPIYIVTEYMSKGSLLDFLKG-ETGKYLRLPQLVDMAAQIASGMAYVE----- 380
Query: 606 GVFSNN-----LKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNS 657
N L+ +IL+ +NLV K++ + L L E+ E + G P + P +
Sbjct: 381 ---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTA-PEAA 436
Query: 658 ARGKLEEKIDIYDFGLILLEII-VGR---PLKSRKEVDLLKNQLQAVVTADESARRSMVD 713
G+ K D++ FG++L E+ GR P +EV L V E R M
Sbjct: 437 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV------LDQV----ERGYR-MPC 485
Query: 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754
P C + M +C K P ERP+ E + L+
Sbjct: 486 P---PECPESLHDLMC----QCWRKEPEERPTFEYLQAFLE 519
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 75.2 bits (185), Expect = 2e-14
Identities = 41/213 (19%), Positives = 69/213 (32%), Gaps = 29/213 (13%)
Query: 146 AIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLP-DSFSYLEN 204
+P + + + L N +A L L L + + ++F L +
Sbjct: 24 QVP---ELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSS 80
Query: 205 LRVLALSNNHFYGEVPD--FSGLTYLQVLDLENNALGPQFPKVG-----KKLVTMILSKN 257
L +L L N F ++ F+GL L+VL L L L ++L N
Sbjct: 81 LIILKLDYNQF-LQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDN 139
Query: 258 KFRSAIPAEV-SSYYQLQRLDLSSNRFVGPFPQALLSLPSI--TYLNIADNKLTG----- 309
+ PA + + LDL+ N+ + LL+ T L ++ L
Sbjct: 140 NIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYW 199
Query: 310 ------KLFDDLSCNPELGFVDLSSNLLTGQLP 336
+ L DLS N +
Sbjct: 200 LGWEKCGNPFKNTSITTL---DLSGNGFKESMA 229
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 74.8 bits (184), Expect = 3e-14
Identities = 49/261 (18%), Positives = 77/261 (29%), Gaps = 36/261 (13%)
Query: 124 SGKISRLSSLEILNMSSNFLNGAIPQEL-SILTSLQTLILDENMLAGRVPDWLGSLPILA 182
SRL L+ L + I L+SL L LD N L L
Sbjct: 47 ETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLE 106
Query: 183 VLSLRNNMFNGTL--PDSFSYLENLRVLALSNNHFYGEVPD--FSGLTYLQVLDLENNAL 238
VL+L +G + + F L +L +L L +N+ P F + VLDL N +
Sbjct: 107 VLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKV 166
Query: 239 GPQFPK------VGKKLVTMILSKNKFRSAIPAEVSSY--------YQLQRLDLSSNRFV 284
+ GK + LS + + + LDLS N F
Sbjct: 167 -KSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFK 225
Query: 285 GPFPQALLSLPSITYLNIADNKLTGKLFDDLSCN-----PELGF----------VDLSSN 329
+ + T + + + F DLS +
Sbjct: 226 ESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKS 285
Query: 330 LLTGQLPNCLLAGSKNRVVLY 350
+ L + + + L
Sbjct: 286 KIF-ALLKSVFSHFTDLEQLT 305
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 72.5 bits (178), Expect = 2e-13
Identities = 50/292 (17%), Positives = 91/292 (31%), Gaps = 48/292 (16%)
Query: 77 TQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEIL 136
L + L ++F L L +L+L +G + L++LE+L
Sbjct: 57 QFLKVEQQT----PGLVIRNNTFR----GLSSLIILKLDYNQFLQLETGAFNGLANLEVL 108
Query: 137 NMSSNFLNGA-IPQEL-SILTSLQTLILDENMLAGRVPDWL-GSLPILAVLSLRNNMFNG 193
++ L+GA + LTSL+ L+L +N + P ++ VL L N
Sbjct: 109 TLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKS 168
Query: 194 TLPDSFSYLE--NLRVLALSNNHFY---------GEVPDFSGLTYLQVLDLENNALGPQF 242
+ + + +L LS+ + + T + LDL N
Sbjct: 169 ICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESM 228
Query: 243 PKV----------------GKKLVTMILSKNKFRSAIPAEVS---SYYQLQRLDLSSNRF 283
K + F+ ++ DLS ++
Sbjct: 229 AKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKD-PDNFTFKGLEASGVKTCDLSKSKI 287
Query: 284 VGPFPQALLSLPSITYLNIADNKLT---GKLFDDLSCNPELGFVDLSSNLLT 332
+ L +A N++ F L+ L ++LS N L
Sbjct: 288 FALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLT---HLLKLNLSQNFLG 336
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 70.5 bits (173), Expect = 6e-13
Identities = 49/268 (18%), Positives = 87/268 (32%), Gaps = 48/268 (17%)
Query: 75 SITQLHIVGNKRAPMLPLSF-SMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSL 133
L + NK + + TL++L + + + L G + +S+
Sbjct: 155 RFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSI 214
Query: 134 EILNMSSNFLNGAIPQELSIL---TSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNM 190
L++S N ++ + T +Q+LIL + G S N
Sbjct: 215 TTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMG------SSFGHTNFKDPDNFT 268
Query: 191 FNGTLPDSFSYLENLRVLALSNNHFYGEVPD--FSGLTYLQVLDLENNALGPQFPKVGKK 248
F G L S ++ LS + + FS T L+ L L N +
Sbjct: 269 FKG-LEAS-----GVKTCDLSKSKI-FALLKSVFSHFTDLEQLTLAQNEI---------- 311
Query: 249 LVTMILSKNKFRSAIPAEV-SSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKL 307
+ I L +L+LS N + +L + L+++ N +
Sbjct: 312 ------------NKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHI 359
Query: 308 T---GKLFDDLSCNPELGFVDLSSNLLT 332
+ F L P L + L +N L
Sbjct: 360 RALGDQSFLGL---PNLKELALDTNQLK 384
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 68.2 bits (167), Expect = 4e-12
Identities = 53/294 (18%), Positives = 88/294 (29%), Gaps = 47/294 (15%)
Query: 15 LAYILLQVNHSEQLQSSQAQTLLRIQGLLNNPAVLSSWNITTEFCNTEPTSSLTVVCYEE 74
+ L N +++S + LL QG LSS +
Sbjct: 156 FHVLDLTFN---KVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNT 212
Query: 75 SITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLE 134
SIT L + GN SM + ++ L L + S
Sbjct: 213 SITTLDLSGNG------FKESMAKRFFDAIAGTKIQSLILSNSYN------MGSSFGHTN 260
Query: 135 ILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGT 194
+ + G + ++T L ++ + + L L+L N N
Sbjct: 261 FKDPDNFTFKGLEA------SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKI 314
Query: 195 LPDSFSYLENLRVLALSNNHFYGEVPD--FSGLTYLQVLDLENNALGPQFPKVGKKLVTM 252
++F L +L L LS N G + F L L+VLDL N +
Sbjct: 315 DDNAFWGLTHLLKLNLSQNFL-GSIDSRMFENLDKLEVLDLSYNHI-------------- 359
Query: 253 ILSKNKFRSAIPAEV-SSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADN 305
A+ + L+ L L +N+ L S+ + + N
Sbjct: 360 --------RALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTN 405
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 5e-06
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Query: 129 RLSSLEILNMSSNFLNGAIPQEL-SILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLR 187
L+ L LN+S NFL G+I + L L+ L L N + LP L L+L
Sbjct: 321 GLTHLLKLNLSQNFL-GSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALD 379
Query: 188 NNMFNGTLPDS-FSYLENLRVLALSNNHF 215
N ++PD F L +L+ + L N +
Sbjct: 380 TNQLK-SVPDGIFDRLTSLQKIWLHTNPW 407
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 70.4 bits (173), Expect = 5e-14
Identities = 23/137 (16%), Positives = 60/137 (43%), Gaps = 4/137 (2%)
Query: 102 TLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLI 161
T ++ L + L ++ + L+G I +++ L +++ P +S L++L+ L
Sbjct: 39 TEAQMNSLTYITLANINVTD-LTG-IEYAHNIKDLTINNIHATNYNP--ISGLSNLERLR 94
Query: 162 LDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD 221
+ + L L L +L + ++ + ++ + L + + LS N ++
Sbjct: 95 IMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIMP 154
Query: 222 FSGLTYLQVLDLENNAL 238
L L+ L+++ + +
Sbjct: 155 LKTLPELKSLNIQFDGV 171
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 63.4 bits (155), Expect = 1e-11
Identities = 27/138 (19%), Positives = 56/138 (40%), Gaps = 7/138 (5%)
Query: 199 FSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVG---KKLVTMILS 255
Y N++ L ++N H SGL+ L+ L + + L + +S
Sbjct: 62 IEYAHNIKDLTINNIHA-TNYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDIS 120
Query: 256 KNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDL 315
+ +I ++++ ++ +DLS N + L +LP + LNI + + + +
Sbjct: 121 HSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIMPLKTLPELKSLNIQFDGVHD--YRGI 177
Query: 316 SCNPELGFVDLSSNLLTG 333
P+L + S + G
Sbjct: 178 EDFPKLNQLYAFSQTIGG 195
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 3e-09
Identities = 26/163 (15%), Positives = 55/163 (33%), Gaps = 26/163 (15%)
Query: 192 NGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVT 251
+ T + + + +L + L+N V D +G+ Y +
Sbjct: 33 SSTANITEAQMNSLTYITLANI----NVTDLTGIEYA------------------HNIKD 70
Query: 252 MILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKL 311
+ ++ + P +S L+RL + L L S+T L+I+ + +
Sbjct: 71 LTINNIHATNYNP--ISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSI 128
Query: 312 FDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNC 354
++ P++ +DLS N + L L +
Sbjct: 129 LTKINTLPKVNSIDLSYNGAITDIMP--LKTLPELKSLNIQFD 169
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 71.9 bits (177), Expect = 6e-14
Identities = 71/284 (25%), Positives = 119/284 (41%), Gaps = 55/284 (19%)
Query: 486 GEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFEC 545
G G G+++ G T VA++ LK + S F+ L+ +L+H+ LV +
Sbjct: 22 GAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ- 79
Query: 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVP 605
I++I EY+ NG+L ++ + LT + + A +A+G+ F+
Sbjct: 80 -------EPIYIITEYMENGSLVDFLKT-PSGIKLTINKLLDMAAQIAEGMAFIE----- 126
Query: 606 GVFSNN-----LKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSID---P 654
N L+ +IL+ L KI+ + L L E+ E + G P I P
Sbjct: 127 ---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP----IKWTAP 179
Query: 655 TNSARGKLEEKIDIYDFGLILLEII-VGR---PLKSRKEVDLLKNQLQAVVTADESARRS 710
G K D++ FG++L EI+ GR P + EV +Q + E R
Sbjct: 180 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV------IQNL----ERGYR- 228
Query: 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754
MV P C +E + M C + P +RP+ + + L+
Sbjct: 229 MVRP---DNCPEELYQLMR----LCWKERPEDRPTFDYLRSVLE 265
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 72.9 bits (179), Expect = 6e-14
Identities = 39/233 (16%), Positives = 65/233 (27%), Gaps = 18/233 (7%)
Query: 132 SLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMF 191
S + + + IP + + L L L + + N
Sbjct: 10 SNRVFLCQESKVT-EIPS--DLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDV 66
Query: 192 NGTLP-DSFSYLENLRVLALSNNHFYGEVPD--FSGLTYLQVLDLENNALG--PQFPKVG 246
+ D FS L L + + + + F L LQ L + N + P K+
Sbjct: 67 LEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIH 126
Query: 247 -KKLVTMILSKNKFRSAIPAEVSSY--YQLQRLDLSSNRFVGPFPQALLSLPSITYLNIA 303
+ V + + N I ++ L L+ N A
Sbjct: 127 SLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSD 186
Query: 304 DNKLT---GKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARN 353
+N L +F S L D+S + LP+ L K N
Sbjct: 187 NNNLEELPNDVFHGASGPVIL---DISRTRIH-SLPSYGLENLKKLRARSTYN 235
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 72.9 bits (179), Expect = 7e-14
Identities = 48/231 (20%), Positives = 77/231 (33%), Gaps = 12/231 (5%)
Query: 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQE-LSILTSLQTL-ILDE 164
+ LR V L G S LE + +S N + I + S L L + I
Sbjct: 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89
Query: 165 NMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD--F 222
N L P+ +LP L L + N + +L + +N + F
Sbjct: 90 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSF 149
Query: 223 SGLTY-LQVLDLENNALG--PQFPKVGKKLVTMILSKNKFRSAIPAEV-SSYYQLQRLDL 278
GL++ +L L N + G +L + LS N +P +V LD+
Sbjct: 150 VGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDI 209
Query: 279 SSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSN 329
S R L +L + + + K + L L L+
Sbjct: 210 SRTRIHSLPSYGLENLKKLRARSTYNLKKLP-TLEKL---VALMEASLTYP 256
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 73.6 bits (181), Expect = 8e-14
Identities = 66/281 (23%), Positives = 115/281 (40%), Gaps = 49/281 (17%)
Query: 486 GEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFEC 545
G G G+++ T VA++ +K S F+ ++ L+H LV +
Sbjct: 197 GAGQFGEVWMATYNKHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK- 254
Query: 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVP 605
I++I E++ G+L ++ + I + +A+G+ F+
Sbjct: 255 -------EPIYIITEFMAKGSLLDFLKS-DEGSKQPLPKLIDFSAQIAEGMAFIE----- 301
Query: 606 GVFSNN-----LKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNS 657
N L+ +IL+ +LV KI+ + L + E+ E + G P + P
Sbjct: 302 ---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTA-PEAI 357
Query: 658 ARGKLEEKIDIYDFGLILLEII-VGR---PLKSRKEVDLLKNQLQAVVTADESARRSMVD 713
G K D++ FG++L+EI+ GR P S EV ++A+ E R M
Sbjct: 358 NFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV------IRAL----ERGYR-MPR 406
Query: 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754
P + C +E L +M C + P ERP+ E + L
Sbjct: 407 P---ENCPEE-LYNIMMRCWK---NRPEERPTFEYIQSVLD 440
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 71.6 bits (176), Expect = 1e-13
Identities = 35/183 (19%), Positives = 67/183 (36%), Gaps = 12/183 (6%)
Query: 151 LSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLAL 210
L + + ++ + V L + LS + YL NL L L
Sbjct: 15 DPALANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVTTI--EGVQYLNNLIGLEL 70
Query: 211 SNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVG-KKLVTMILSKNKFRSAIPAEVSS 269
+N ++ LT + L+L N L G + + T+ L+ + P ++
Sbjct: 71 KDNQI-TDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTP--LAG 127
Query: 270 YYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSN 329
LQ L L N+ L L ++ YL+I + +++ L+ +L + N
Sbjct: 128 LSNLQVLYLDLNQITN--ISPLAGLTNLQYLSIGNAQVSD--LTPLANLSKLTTLKADDN 183
Query: 330 LLT 332
++
Sbjct: 184 KIS 186
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 69.7 bits (171), Expect = 5e-13
Identities = 46/211 (21%), Positives = 79/211 (37%), Gaps = 16/211 (7%)
Query: 100 VTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQT 159
T L + L G+ + G + L++L L + N + P L LT +
Sbjct: 34 TVTQADLDGITTLSAFGTGV-TTIEG-VQYLNNLIGLELKDNQITDLAP--LKNLTKITE 89
Query: 160 LILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEV 219
L L N L + + L + L L + + L NL+VL L N +
Sbjct: 90 LELSGNPL--KNVSAIAGLQSIKTLDLTSTQITDV--TPLAGLSNLQVLYLDLNQI-TNI 144
Query: 220 PDFSGLTYLQVLDLENNALGPQFPKVG--KKLVTMILSKNKFRSAIPAEVSSYYQLQRLD 277
+GLT LQ L + N + + KL T+ NK P ++S L +
Sbjct: 145 SPLAGLTNLQYLSIGNAQVS-DLTPLANLSKLTTLKADDNKISDISP--LASLPNLIEVH 201
Query: 278 LSSNRFVGPFPQALLSLPSITYLNIADNKLT 308
L +N+ L + ++ + + + +T
Sbjct: 202 LKNNQISDV--SPLANTSNLFIVTLTNQTIT 230
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 62.4 bits (152), Expect = 1e-10
Identities = 47/185 (25%), Positives = 78/185 (42%), Gaps = 14/185 (7%)
Query: 100 VTTLVKLPDLKVLRLVS--LGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSL 157
V+ + L +K L L S + PL+G LS+L++L + N + P L+ LT+L
Sbjct: 100 VSAIAGLQSIKTLDLTSTQITDVTPLAG----LSNLQVLYLDLNQITNISP--LAGLTNL 153
Query: 158 QTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYG 217
Q L + ++ P L +L L L +N + + L NL + L NN
Sbjct: 154 QYLSIGNAQVSDLTP--LANLSKLTTLKADDNKI--SDISPLASLPNLIEVHLKNNQI-S 208
Query: 218 EVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAI-PAEVSSYYQLQRL 276
+V + + L ++ L N + Q LV + K + I PA +S
Sbjct: 209 DVSPLANTSNLFIVTLTNQTITNQPVFYNNNLVVPNVVKGPSGAPIAPATISDNGTYASP 268
Query: 277 DLSSN 281
+L+ N
Sbjct: 269 NLTWN 273
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 71.4 bits (175), Expect = 2e-13
Identities = 57/217 (26%), Positives = 83/217 (38%), Gaps = 44/217 (20%)
Query: 131 SSLEILNMSSNFLNGAIPQE--LSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRN 188
S +L++S N L + E + LT+L +L+L N L + +P L L L +
Sbjct: 39 SYTALLDLSHNNL-SRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97
Query: 189 NMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD--FSGLTYLQVLDLENNALGPQFPKVG 246
N + FS L+ L VL L NNH V F + LQ L L N +
Sbjct: 98 NHLHTLDEFLFSDLQALEVLLLYNNHI-VVVDRNAFEDMAQLQKLYLSQNQI-------- 148
Query: 247 KKLVTMILSKNKFRSAIPAEV----SSYYQLQRLDLSSNRFVGPFPQALLSLPSIT--YL 300
S P E+ + +L LDLSSN+ L LP+ L
Sbjct: 149 --------------SRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGL 194
Query: 301 NIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPN 337
+ +N L C+ +L L S+ QL +
Sbjct: 195 YLHNNPLE--------CDCKL--YQLFSHWQYRQLSS 221
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 49.5 bits (118), Expect = 2e-06
Identities = 30/126 (23%), Positives = 47/126 (37%), Gaps = 19/126 (15%)
Query: 102 TLVKLPDLKVLRL-----VSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQE-LSILT 155
V +P+L+ L L +L S L +LE+L + +N + + + +
Sbjct: 83 AFVPVPNLRYLDLSSNHLHTLD-----EFLFSDLQALEVLLLYNNHIV-VVDRNAFEDMA 136
Query: 156 SLQTLILDENMLAGRVP----DWLGSLPILAVLSLRNNMFNGTLPDSFSYLENL--RVLA 209
LQ L L +N ++ R P LP L +L L +N L L
Sbjct: 137 QLQKLYLSQNQIS-RFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLY 195
Query: 210 LSNNHF 215
L NN
Sbjct: 196 LHNNPL 201
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 70.3 bits (173), Expect = 2e-13
Identities = 36/175 (20%), Positives = 71/175 (40%), Gaps = 25/175 (14%)
Query: 460 GLPAYRTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHST-R 518
+ A F +G+G G + G + G VA+ K K +T +
Sbjct: 4 SVAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAV---KCIKNDATAQ 59
Query: 519 NFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQ 578
F+ ++++LRH +LV LG E ++++ EY+ G+L ++
Sbjct: 60 AFLAEASVMTQLRHSNLVQLLGVIVE------EKGGLYIVTEYMAKGSLVDYLRS-RGRS 112
Query: 579 SLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNN-----LKITDILLDQNLVAKIS 628
L + ++ V + +++L NN L ++L+ ++ VAK+S
Sbjct: 113 VLGGDCLLKFSLDVCEAMEYLE--------GNNFVHRDLAARNVLVSEDNVAKVS 159
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 70.5 bits (173), Expect = 2e-13
Identities = 61/281 (21%), Positives = 105/281 (37%), Gaps = 50/281 (17%)
Query: 486 GEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHST--RNFMHHIELISKLRHRHLVSALGHC 542
G GS +Y+G + VA L+ +K + + F E++ L+H ++V
Sbjct: 35 GRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSW 94
Query: 543 FECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTG 602
I L+ E + +GTL++++ + + S + KG+QFLHT
Sbjct: 95 ESTVKGKK---CIVLVTELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLHTR 148
Query: 603 IVPGVFSNNLKITDILLDQNL-VAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGK 661
P + +LK +I + KI L L + + G
Sbjct: 149 -TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF--------------AKAVIGT 193
Query: 662 LE------------EKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709
E E +D+Y FG+ +LE+ S E Q+ VT+
Sbjct: 194 PEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYS--ECQNAA-QIYRRVTSGVK--- 247
Query: 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
PA +K ++E C+ +N ER S++D+L
Sbjct: 248 ----PASFDKVAIPEVKEIIE---GCIRQNKDERYSIKDLL 281
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 70.5 bits (173), Expect = 3e-13
Identities = 61/327 (18%), Positives = 115/327 (35%), Gaps = 59/327 (18%)
Query: 486 GEGSQGQMYRGRLK-----NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALG 540
G+G+ G + R G VA++ L+ R+F I+++ L +V G
Sbjct: 32 GKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRG 91
Query: 541 HCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLH 600
+ + L+ EY+P+G LR ++ A L ++ + + + KG+++L
Sbjct: 92 VSY-----GPGRQSLRLVMEYLPSGCLRDFLQRHRAR--LDASRLLLYSSQICKGMEYLG 144
Query: 601 TGIVPGVFSNN-----LKITDILLDQNLVAKISSYNLP-LLAENAE----KVGHVIP--- 647
S L +IL++ KI+ + L LL + + + P
Sbjct: 145 --------SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFW 196
Query: 648 YSGSIDPTNSARGKLEEKIDIYDFGLILLEII--------VGRPLKSRKEVDLLKNQLQA 699
Y+ P + + + D++ FG++L E+ + L
Sbjct: 197 YA----PESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSR 252
Query: 700 VVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQV 759
++ E +R + P AC E + M C +P +RPS + L
Sbjct: 253 LLELLEEGQR-LPAPP---ACPAEVHELMKL----CWAPSPQDRPSFSALGPQL------ 298
Query: 760 QDAWHSQSSEGSPISPPRPSRQHLSFH 786
W + P +H S
Sbjct: 299 DMLWSGSRGCETHAFTAHPEGKHHSLS 325
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 70.5 bits (173), Expect = 3e-13
Identities = 47/291 (16%), Positives = 105/291 (36%), Gaps = 62/291 (21%)
Query: 486 GEGSQGQMYRGRLKNGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRH--RHLVSALGH 541
G G ++++ + AI+ + +++ + ++ + I ++KL+ ++
Sbjct: 18 GSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD- 76
Query: 542 CFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLT-------WTQRISAAIGVAK 594
Y I+++ E N L SW+ +S+ W + +
Sbjct: 77 ----YEITD--QYIYMVMECG-NIDLNSWL---KKKKSIDPWERKSYWKN-------MLE 119
Query: 595 GIQFLHT-GIVPGVFSNNLKITDILLDQNLV-------AKISSYNLPLLAENAEKVG--- 643
+ +H GIV +LK + L+ ++ A + + +++ +VG
Sbjct: 120 AVHTIHQHGIVHS----DLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDS-QVGTVN 174
Query: 644 ----HVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQA 699
I S ++ K+ K D++ G IL + G+ + + K L A
Sbjct: 175 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK--LHA 232
Query: 700 VVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
++ + K D V CL ++P +R S+ ++L
Sbjct: 233 IIDPNHEIE---FPDIPEKDLQD--------VLKCCLKRDPKQRISIPELL 272
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 71.7 bits (175), Expect = 4e-13
Identities = 53/235 (22%), Positives = 89/235 (37%), Gaps = 16/235 (6%)
Query: 100 VTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQT 159
T +L + + + + + G I L ++ L ++ N L P L+ L +L
Sbjct: 36 AVTQNELNSIDQIIANNSDI-KSVQG-IQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGW 91
Query: 160 LILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEV 219
L LDEN + L L L LSL +N + + +L L L L NN ++
Sbjct: 92 LFLDENKIKDLSS--LKDLKKLKSLSLEHN--GISDINGLVHLPQLESLYLGNNKIT-DI 146
Query: 220 PDFSGLTYLQVLDLENNALG--PQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLD 277
S LT L L LE+N + + KL + LSKN ++ L L+
Sbjct: 147 TVLSRLTKLDTLSLEDNQISDIVPLAGL-TKLQNLYLSKNHISDLRA--LAGLKNLDVLE 203
Query: 278 LSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLT 332
L S + +L + D L + +S + + ++ +L
Sbjct: 204 LFSQECLNKPINHQSNLVVPNTVKNTDGSLVT--PEIISDDGDYEKPNVKWHLPE 256
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 52.0 bits (124), Expect = 6e-07
Identities = 23/138 (16%), Positives = 47/138 (34%), Gaps = 14/138 (10%)
Query: 199 FSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNAL----GPQFPKVGKKLVTMIL 254
L + + L + + N+ + G Q+ + + L
Sbjct: 17 DDAFAETIKDNLKKKSV-TDAVTQNELNSIDQIIANNSDIKSVQGIQYL---PNVTKLFL 72
Query: 255 SKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDD 314
+ NK P +++ L L L N+ L L + L++ N ++ +
Sbjct: 73 NGNKLTDIKP--LTNLKNLGWLFLDENKIKDLSS--LKDLKKLKSLSLEHNGIS--DING 126
Query: 315 LSCNPELGFVDLSSNLLT 332
L P+L + L +N +T
Sbjct: 127 LVHLPQLESLYLGNNKIT 144
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 6e-13
Identities = 48/291 (16%), Positives = 105/291 (36%), Gaps = 62/291 (21%)
Query: 486 GEGSQGQMYRGRLKNGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRH--RHLVSALGH 541
G G ++++ + AI+ + +++ + ++ + I ++KL+ ++
Sbjct: 37 GSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD- 95
Query: 542 CFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLT-------WTQRISAAIGVAK 594
Y I+++ E N L SW+ + +S+ W + +
Sbjct: 96 ----YEITD--QYIYMVMECG-NIDLNSWLKK---KKSIDPWERKSYWKN-------MLE 138
Query: 595 GIQFLHT-GIVPGVFSNNLKITDILLDQNLVAKIS----SYNLPLLAENAEK---VG--- 643
+ +H GIV +LK + L+ ++ K+ + + + K VG
Sbjct: 139 AVHTIHQHGIVHS----DLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVN 193
Query: 644 ----HVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQA 699
I S ++ K+ K D++ G IL + G+ + + K L A
Sbjct: 194 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK--LHA 251
Query: 700 VVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
++ + K D V CL ++P +R S+ ++L
Sbjct: 252 IIDPNHEIE---FPDIPEKDLQD--------VLKCCLKRDPKQRISIPELL 291
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 70.1 bits (172), Expect = 1e-12
Identities = 61/284 (21%), Positives = 114/284 (40%), Gaps = 59/284 (20%)
Query: 486 GEGSQGQMYRGRLKNGTFVAIRCLKMKKCHST-RNFMHHIELISKLRHRHLVSALGHCFE 544
G+G G + G + G VA+ K K +T + F+ ++++LRH +LV LG E
Sbjct: 202 GKGEFGDVMLGDYR-GNKVAV---KCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
++++ EY+ G+L ++ L + ++ V + +++L
Sbjct: 258 EK------GGLYIVTEYMAKGSLVDYLRS-RGRSVLGGDCLLKFSLDVCEAMEYLE---- 306
Query: 605 PGVFSNN-----LKITDILLDQNLVAKISSYNLPLLA--ENAEKVGHVIPYSGSID---P 654
NN L ++L+ ++ VAK+S + L ++ + +P + P
Sbjct: 307 ----GNNFVHRDLAARNVLVSEDNVAKVSDFG---LTKEASSTQDTGKLP----VKWTAP 355
Query: 655 TNSARGKLEEKIDIYDFGLILLEII-VGR---PLKSRKEVDLLKNQLQAVVTADESARRS 710
K K D++ FG++L EI GR P K+V + V E +
Sbjct: 356 EALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV------VPRV----EKGYK- 404
Query: 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754
M P C + +M+ C + A RP+ + L+
Sbjct: 405 MDAP---DGCPPA-VYDVMKNCWH---LDAATRPTFLQLREQLE 441
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 69.5 bits (170), Expect = 1e-12
Identities = 47/291 (16%), Positives = 106/291 (36%), Gaps = 62/291 (21%)
Query: 486 GEGSQGQMYRGRLKNGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRH--RHLVSALGH 541
G G ++++ + AI+ + +++ + ++ + I ++KL+ ++
Sbjct: 65 GSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD- 123
Query: 542 CFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLT-------WTQRISAAIGVAK 594
Y I+++ E N L SW+ +S+ W + A
Sbjct: 124 ----YEITD--QYIYMVMECG-NIDLNSWL---KKKKSIDPWERKSYWKNMLEA------ 167
Query: 595 GIQFLHT-GIVPGVFSNNLKITDILLDQNLV-------AKISSYNLPLLAENAEKVG--- 643
+ +H GIV +LK + L+ ++ A + + +++ +VG
Sbjct: 168 -VHTIHQHGIVHS----DLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDS-QVGAVN 221
Query: 644 ----HVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQA 699
I S ++ K+ K D++ G IL + G+ + + ++L A
Sbjct: 222 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI--SKLHA 279
Query: 700 VVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
++ + K D V CL ++P +R S+ ++L
Sbjct: 280 IIDPNHEIE---FPDIPEKDLQD--------VLKCCLKRDPKQRISIPELL 319
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 1e-12
Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 28/154 (18%)
Query: 486 GEGSQGQMYRGRLKN-----GTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSAL 539
GEG G++ G VA++ LK + I+++ L H H++
Sbjct: 40 GEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYK 99
Query: 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFL 599
G C + + + + L+ EYVP G+LR ++ S+ Q + A + +G+ +L
Sbjct: 100 GCCED-----AGAASLQLVMEYVPLGSLRDYLPR----HSIGLAQLLLFAQQICEGMAYL 150
Query: 600 HTGIVPGVFSNN-----LKITDILLDQNLVAKIS 628
H + + L ++LLD + + KI
Sbjct: 151 H--------AQHYIHRDLAARNVLLDNDRLVKIG 176
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 2e-12
Identities = 51/194 (26%), Positives = 76/194 (39%), Gaps = 18/194 (9%)
Query: 146 AIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENL 205
AIP +I + L L N L+ L L +L L +N F L+NL
Sbjct: 30 AIPS--NIPADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNL 87
Query: 206 RVLALSNNHFYGEVPD--FSGLTYLQVLDLENNALG--PQ--FPKVGKKLVTMILSKNKF 259
L +++N +P F L L L L+ N L P F + KL + L N+
Sbjct: 88 ETLWVTDNKL-QALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLT-KLTYLSLGYNEL 145
Query: 260 RSAIPAEV-SSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLT---GKLFDDL 315
+S +P V L+ L L +N+ A L + L + +N+L FD L
Sbjct: 146 QS-LPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSL 204
Query: 316 SCNPELGFVDLSSN 329
+L + L N
Sbjct: 205 ---EKLKMLQLQEN 215
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 4e-12
Identities = 49/183 (26%), Positives = 74/183 (40%), Gaps = 12/183 (6%)
Query: 131 SSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNM 190
+ + L++ SN L+ + LT L+ L L++N L L L L + +N
Sbjct: 37 ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNK 96
Query: 191 FNGTLPDS-FSYLENLRVLALSNNHFYGEVPD--FSGLTYLQVLDLENNALG--PQ--FP 243
LP F L NL L L N +P F LT L L L N L P+ F
Sbjct: 97 LQ-ALPIGVFDQLVNLAELRLDRNQL-KSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFD 154
Query: 244 KVGKKLVTMILSKNKFRSAIPAEV-SSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNI 302
K+ L + L N+ + +P +L+ L L +N+ A SL + L +
Sbjct: 155 KLTS-LKELRLYNNQLKR-VPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQL 212
Query: 303 ADN 305
+N
Sbjct: 213 QEN 215
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 3e-09
Identities = 44/163 (26%), Positives = 68/163 (41%), Gaps = 22/163 (13%)
Query: 183 VLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD--FSGLTYLQVLDLENN---A 237
L L++N + +F L LR+L L++N +P F L L+ L + +N A
Sbjct: 41 KLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKL-QTLPAGIFKELKNLETLWVTDNKLQA 99
Query: 238 LGPQFPKVGKKLVTMILSKNKFRSAIPAEV-SSYYQLQRLDLSSNRF----VGPFPQALL 292
L L + L +N+ +S +P V S +L L L N G F
Sbjct: 100 LPIGVFDQLVNLAELRLDRNQLKS-LPPRVFDSLTKLTYLSLGYNELQSLPKGVFD---- 154
Query: 293 SLPSITYLNIADNKLT---GKLFDDLSCNPELGFVDLSSNLLT 332
L S+ L + +N+L FD L+ EL + L +N L
Sbjct: 155 KLTSLKELRLYNNQLKRVPEGAFDKLT---ELKTLKLDNNQLK 194
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 2e-07
Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 16/139 (11%)
Query: 204 NLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKVG-----KKLVTMILSKN 257
+ + L L +N F LT L++L L +N L Q G K L T+ ++ N
Sbjct: 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKL--QTLPAGIFKELKNLETLWVTDN 95
Query: 258 KFRSAIPAEVSSY-YQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLT---GKLFD 313
K ++ +P V L L L N+ P+ SL +TYL++ N+L +FD
Sbjct: 96 KLQA-LPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFD 154
Query: 314 DLSCNPELGFVDLSSNLLT 332
L+ L + L +N L
Sbjct: 155 KLT---SLKELRLYNNQLK 170
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 3e-07
Identities = 40/136 (29%), Positives = 58/136 (42%), Gaps = 7/136 (5%)
Query: 105 KLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQEL-SILTSLQTLILD 163
+L +L+ L + L G +L +L L + N L ++P + LT L L L
Sbjct: 83 ELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLK-SLPPRVFDSLTKLTYLSLG 141
Query: 164 ENMLAGRVPDWL-GSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD- 221
N L +P + L L L L NN +F L L+ L L NN VP+
Sbjct: 142 YNELQ-SLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLK-RVPEG 199
Query: 222 -FSGLTYLQVLDLENN 236
F L L++L L+ N
Sbjct: 200 AFDSLEKLKMLQLQEN 215
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 3e-04
Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 9/93 (9%)
Query: 261 SAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLT---GKLFDDLSC 317
+AIP+ + + ++LDL SN+ +A L + L + DNKL +F +L
Sbjct: 29 TAIPSNIPA--DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELK- 85
Query: 318 NPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLY 350
L + ++ N L LP + N L
Sbjct: 86 --NLETLWVTDNKLQ-ALPIGVFDQLVNLAELR 115
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 2e-12
Identities = 35/154 (22%), Positives = 67/154 (43%), Gaps = 26/154 (16%)
Query: 486 GEGSQGQMYRGRLK-----NGTFVAIRCLKMKKCHSTRN-FMHHIELISKLRHRHLVSAL 539
GEG G++ R G VA++ LK + + IE++ L H ++V
Sbjct: 30 GEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYK 89
Query: 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFL 599
G C E + I LI E++P+G+L+ ++ + ++ + Q++ A+ + KG+ +L
Sbjct: 90 GICTE-----DGGNGIKLIMEFLPSGSLKEYL-PKNKNK-INLKQQLKYAVQICKGMDYL 142
Query: 600 HTGIVPGVFSNN-----LKITDILLDQNLVAKIS 628
S L ++L++ KI
Sbjct: 143 G--------SRQYVHRDLAARNVLVESEHQVKIG 168
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 2e-12
Identities = 33/153 (21%), Positives = 64/153 (41%), Gaps = 25/153 (16%)
Query: 486 GEGSQGQMYRGRLK-----NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALG 540
G+G+ G + R G VA++ L+ R+F IE++ L+H ++V G
Sbjct: 19 GKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKG 78
Query: 541 HCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLH 600
C+ + + LI EY+P G+LR ++ + + + + + KG+++L
Sbjct: 79 VCYS-----AGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYLG 131
Query: 601 TGIVPGVFSNN-----LKITDILLDQNLVAKIS 628
+ L +IL++ KI
Sbjct: 132 --------TKRYIHRDLATRNILVENENRVKIG 156
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 67.2 bits (165), Expect = 2e-12
Identities = 61/308 (19%), Positives = 109/308 (35%), Gaps = 55/308 (17%)
Query: 462 PAYRTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFM 521
P+ E + +G G G + G+ + VAI+ +K + S F+
Sbjct: 9 PSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFI 67
Query: 522 HHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLT 581
+++ L H LV G C + IF+I EY+ NG L +++ E
Sbjct: 68 EEAKVMMNLSHEKLVQLYGVCTKQ-------RPIFIITEYMANGCLLNYLREMRHR--FQ 118
Query: 582 WTQRISAAIGVAKGIQFLHTGIVPGVFSNN-----LKITDILLDQNLVAKISSYNLPLLA 636
Q + V + +++L S L + L++ V K+S + L
Sbjct: 119 TQQLLEMCKDVCEAMEYLE--------SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV 170
Query: 637 ENAE---KVGHVIPYSGSID---PTNSARGKLEEKIDIYDFGLILLEII-VGR---PLKS 686
+ E VG P + P K K DI+ FG+++ EI +G+ +
Sbjct: 171 LDDEYTSSVGSKFP----VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT 226
Query: 687 RKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSV 746
E + + R + P ++ M C + ERP+
Sbjct: 227 NSET------AEHI----AQGLR-LYRP---HLASEKVYTIMY----SCWHEKADERPTF 268
Query: 747 EDVLWNLQ 754
+ +L N+
Sbjct: 269 KILLSNIL 276
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 67.8 bits (166), Expect = 2e-12
Identities = 33/153 (21%), Positives = 64/153 (41%), Gaps = 25/153 (16%)
Query: 486 GEGSQGQMYRGRL-----KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALG 540
G+G+ G + R G VA++ L+ R+F IE++ L+H ++V G
Sbjct: 50 GKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKG 109
Query: 541 HCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLH 600
C+ + + LI EY+P G+LR ++ + + + + + KG+++L
Sbjct: 110 VCY-----SAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYLG 162
Query: 601 TGIVPGVFSNN-----LKITDILLDQNLVAKIS 628
+ L +IL++ KI
Sbjct: 163 --------TKRYIHRDLATRNILVENENRVKIG 187
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 66.1 bits (162), Expect = 4e-12
Identities = 54/284 (19%), Positives = 106/284 (37%), Gaps = 55/284 (19%)
Query: 486 GEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFEC 545
G G G ++ G N VAI+ ++ + S +F+ E++ KL H LV G C E
Sbjct: 17 GSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 75
Query: 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVP 605
+ I L+ E++ +G L ++ + + V +G+ +L
Sbjct: 76 -------APICLVTEFMEHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLE----- 121
Query: 606 GVFSNN-----LKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSID---P 654
L + L+ +N V K+S + + + + G P + P
Sbjct: 122 ---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP----VKWASP 174
Query: 655 TNSARGKLEEKIDIYDFGLILLEII-VGR---PLKSRKEVDLLKNQLQAVVTADESARRS 710
+ + K D++ FG+++ E+ G+ +S EV ++ + + R
Sbjct: 175 EVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV------VEDI----STGFR- 223
Query: 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754
+ P + + M C + P +RP+ +L L
Sbjct: 224 LYKP---RLASTHVYQIMN----HCWRERPEDRPAFSRLLRQLA 260
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 67.3 bits (165), Expect = 5e-12
Identities = 33/178 (18%), Positives = 71/178 (39%), Gaps = 26/178 (14%)
Query: 459 LGLPAYRTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHST 517
G+ +R ++ + +G G+ G+++ GRL+ + T VA++ +
Sbjct: 96 SGVVLHRAVPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDL 155
Query: 518 RN-FMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI-SEGH 575
+ F+ ++ + H ++V +G C + I+++ E V G +++ +EG
Sbjct: 156 KAKFLQEARILKQYSHPNIVRLIGVCTQK-------QPIYIVMELVQGGDFLTFLRTEGA 208
Query: 576 AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNN-----LKITDILLDQNLVAKIS 628
L + A G+++L S L + L+ + V KIS
Sbjct: 209 ---RLRVKTLLQMVGDAAAGMEYLE--------SKCCIHRDLAARNCLVTEKNVLKIS 255
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 66.1 bits (162), Expect = 5e-12
Identities = 63/285 (22%), Positives = 113/285 (39%), Gaps = 57/285 (20%)
Query: 486 GEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFEC 545
G G G + G+ K VA++ +K + S F + + KL H LV G C
Sbjct: 17 GSGQFGVVKLGKWKGQYDVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPKLVKFYGVC--- 72
Query: 546 YFDDSSVSRIFLIFEYVPNGTLRSWI-SEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
S I+++ EY+ NG L +++ S G L +Q + V +G+ FL
Sbjct: 73 ----SKEYPIYIVTEYISNGCLLNYLRSHGK---GLEPSQLLEMCYDVCEGMAFLE---- 121
Query: 605 PGVFSNN-----LKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSID--- 653
S+ L + L+D++L K+S + + + + VG P +
Sbjct: 122 ----SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFP----VKWSA 173
Query: 654 PTNSARGKLEEKIDIYDFGLILLEII-VGR---PLKSRKEVDLLKNQLQAVVTADESARR 709
P K K D++ FG+++ E+ +G+ L + EV + V R
Sbjct: 174 PEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEV------VLKV----SQGHR 223
Query: 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754
+ P D + M C + P +RP+ + +L +++
Sbjct: 224 -LYRP---HLASDTIYQIMY----SCWHELPEKRPTFQQLLSSIE 260
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 6e-12
Identities = 45/211 (21%), Positives = 76/211 (36%), Gaps = 20/211 (9%)
Query: 106 LPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQEL-SILTSLQTLILDE 164
P + L+L+ L S S L ++ + +S + + L+ + + +
Sbjct: 30 PPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRN 89
Query: 165 NMLAGRVP-DWLGSLPILAVLSLRNNMFNGTLPD--SFSYLENLRVLALSNNHFYGEVPD 221
+ D L LP+L L + N PD + +L +++N + +P
Sbjct: 90 TRNLTYIDPDALKELPLLKFLGIFNTGLK-MFPDLTKVYSTDIFFILEITDNPYMTSIPV 148
Query: 222 --FSGLT-YLQVLDLENNALGPQFPKV------GKKLVTMILSKNKFRSAIPAEV--SSY 270
F GL L L NN F V G KL + L+KNK+ + I + Y
Sbjct: 149 NAFQGLCNETLTLKLYNN----GFTSVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVY 204
Query: 271 YQLQRLDLSSNRFVGPFPQALLSLPSITYLN 301
LD+S + L L + N
Sbjct: 205 SGPSLLDVSQTSVTALPSKGLEHLKELIARN 235
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 2e-09
Identities = 40/231 (17%), Positives = 71/231 (30%), Gaps = 60/231 (25%)
Query: 131 SSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNM 190
E ++ + IP S+ S QTL L E L ++P
Sbjct: 11 HQEEDFRVTCKDIQ-RIP---SLPPSTQTLKLIETHLR--------TIP----------- 47
Query: 191 FNGTLPDSFSYLENLRVLALSNNHFYGEVPD--FSGLTYLQVLDLENNALGPQFPKVGKK 248
+FS L N+ + +S + ++ F L+ + +++ N +
Sbjct: 48 -----SHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNT----------RN 92
Query: 249 LVTMILSKNKFRSAIPAEV-SSYYQLQRLDLSSNRFVG-PFPQALLSLPSITYLNIADNK 306
L + I + L+ L + + P + S L I DN
Sbjct: 93 L-----------TYIDPDALKELPLLKFLGIFNTGLKMFPDLTKVYSTDIFFILEITDNP 141
Query: 307 ----LTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARN 353
+ F L E + L +N T + G+K V +N
Sbjct: 142 YMTSIPVNAFQGLC--NETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKN 189
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 6e-12
Identities = 27/158 (17%), Positives = 59/158 (37%), Gaps = 26/158 (16%)
Query: 486 GEGSQGQMYRGRLKNG----TFVAIRCLKMKKCHSTR---NFMHHIELISKLRHRHLVSA 538
GEG G + G LK VA++ +K S R F+ + H +++
Sbjct: 43 GEGEFGSVMEGNLKQEDGTSLKVAVKTMK-LDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAH---QSLTWTQRISAAIGVAKG 595
LG C E + + +I ++ G L +++ + + + + +A G
Sbjct: 102 LGVCIEM--SSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 596 IQFLHTGIVPGVFSNN-----LKITDILLDQNLVAKIS 628
+++L + N L + +L ++ ++
Sbjct: 160 MEYLS--------NRNFLHRDLAARNCMLRDDMTVCVA 189
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 64.5 bits (158), Expect = 2e-11
Identities = 58/292 (19%), Positives = 120/292 (41%), Gaps = 62/292 (21%)
Query: 477 NNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCL---KMKKCHSTRNFMHHIELISKLRH 532
+F+ +G+G G +Y R ++ +A++ L +++K +E+ S LRH
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 533 RHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI------SEGHA----HQSLTW 582
+++ G YF D++ R++LI EY P GT+ + E +
Sbjct: 69 PNILRLYG-----YFHDAT--RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE---- 117
Query: 583 TQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKV 642
+A + + H+ V ++K ++LL KI+ + + A ++ +
Sbjct: 118 ---------LANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 165
Query: 643 GHVIPYSGSID---PTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQ 698
G++D P +EK+D++ G++ E +VG+ P ++ + K +
Sbjct: 166 D----LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 221
Query: 699 AVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
T + + E + ++ R L NP++RP + +VL
Sbjct: 222 VEFTFPDF--------------VTEGARDLIS---RLLKHNPSQRPMLREVL 256
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 2e-11
Identities = 58/323 (17%), Positives = 108/323 (33%), Gaps = 94/323 (29%)
Query: 477 NNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHL 535
+F +G G GQ+++ + +G I+ +K ++ ++KL H ++
Sbjct: 11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNI 66
Query: 536 VSALGHCFECYFDDSSVS-------------RIFLIFEYVPNGTLRSWISEGHAH----- 577
V H C+ +F+ E+ GTL WI +
Sbjct: 67 V----HYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKV 122
Query: 578 QSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNN-----LKITDILLDQNLVAKISSYNL 632
+L ++I KG+ ++H S LK ++I L KI + L
Sbjct: 123 LALELFEQI------TKGVDYIH--------SKKLINRDLKPSNIFLVDTKQVKIGDFGL 168
Query: 633 PLLAENAEK----VG----------HVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEI 678
+N K G Y +++D+Y GLIL E+
Sbjct: 169 VTSLKNDGKRTRSKGTLRYMSPEQISSQDYG--------------KEVDLYALGLILAEL 214
Query: 679 IVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK 738
+ + E L R ++ D+ KT+++ + L K
Sbjct: 215 L--HVCDTAFETSKFFTDL----------RDGIISD-----IFDKKEKTLLQ---KLLSK 254
Query: 739 NPAERPSVEDVLWNLQFAAQVQD 761
P +RP+ ++L L + +
Sbjct: 255 KPEDRPNTSEILRTLTVWKKSPE 277
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 65.0 bits (159), Expect = 2e-11
Identities = 32/187 (17%), Positives = 70/187 (37%), Gaps = 23/187 (12%)
Query: 456 LGALGLPAYRTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNG----TFVAIRCLKM 511
L +LG+ LE++ F +G+G G + +LK VA++ LK
Sbjct: 2 LDSLGISDELKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKA 61
Query: 512 KKCHSTR--NFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRS 569
S+ F+ + + H H+ +G + +I ++ +G L +
Sbjct: 62 DIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR-AKGRLPIPMVILPFMKHGDLHA 120
Query: 570 WI---SEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNN-----LKITDILLDQ 621
++ G +L + + +A G+++L S N L + +L +
Sbjct: 121 FLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS--------SRNFIHRDLAARNCMLAE 172
Query: 622 NLVAKIS 628
++ ++
Sbjct: 173 DMTVCVA 179
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 2e-11
Identities = 40/166 (24%), Positives = 67/166 (40%), Gaps = 38/166 (22%)
Query: 486 GEGSQGQMYRGRLKNG------TFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSAL 539
GEG+ G+++ N VA++ LK + ++F EL++ L+H+H+V
Sbjct: 50 GEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFF 109
Query: 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSW------------ISEGHAHQSLTWTQRIS 587
G C E + ++FEY+ +G L + E A L Q ++
Sbjct: 110 GVCTEG-------RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLA 162
Query: 588 AAIGVAKGIQFLHTGIVPGVFSNN-----LKITDILLDQNLVAKIS 628
A VA G+ +L + L + L+ Q LV KI
Sbjct: 163 VASQVAAGMVYLA--------GLHFVHRDLATRNCLVGQGLVVKIG 200
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 2e-11
Identities = 60/287 (20%), Positives = 110/287 (38%), Gaps = 59/287 (20%)
Query: 486 GEGSQGQMYRGRLKNG-TFVAIRCLKMKKCHST--RNFMHHIELISKLRHRHLVSALGHC 542
G G G++Y G K VA+ K K + F+ ++ +++H +LV LG C
Sbjct: 22 GGGQYGEVYEGVWKKYSLTVAV---KTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 543 FECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTG 602
+ ++I E++ G L ++ E Q ++ + A ++ +++L
Sbjct: 79 -------TREPPFYIITEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLE-- 128
Query: 603 IVPGVFSNN-----LKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSI-- 652
N L + L+ +N + K++ + L L G P I
Sbjct: 129 ------KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP----IKW 178
Query: 653 -DPTNSARGKLEEKIDIYDFGLILLEII-VGR---PLKSRKEVDLLKNQLQAVVTADESA 707
P + A K K D++ FG++L EI G P +V + + E
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV------YELL----EKD 228
Query: 708 RRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754
R M P + C ++ + M C NP++RPS ++ +
Sbjct: 229 YR-MERP---EGCPEKVYELMRA----CWQWNPSDRPSFAEIHQAFE 267
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 64.4 bits (157), Expect = 3e-11
Identities = 52/303 (17%), Positives = 96/303 (31%), Gaps = 57/303 (18%)
Query: 486 GEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTR-NFMHHIELISKLRHRHLVSALGHCF 543
G+G+ ++RGR K G AI+ M E++ KL H+++V F
Sbjct: 18 GQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL----F 73
Query: 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHT-G 602
+ ++ LI E+ P G+L + + E L ++ + V G+ L G
Sbjct: 74 AIEEETTT-RHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG 132
Query: 603 IV-------------PGVFSNNLKITD----ILLDQNLVAKIS----SYNLP-LLAENAE 640
IV + K+TD L+ + Y P +
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVL 192
Query: 641 KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQA 699
+ H Y +D++ G+ G P + + K +
Sbjct: 193 RKDHQKKYG--------------ATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYK 238
Query: 700 VVTADESARRSMVDPAVNKA-----------CLDESLKTMMEVCVRCLL-KNPAERPSVE 747
++T S S V A N L L+ ++ + +L + + +
Sbjct: 239 IITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFD 298
Query: 748 DVL 750
Sbjct: 299 QFF 301
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 3e-11
Identities = 41/169 (24%), Positives = 69/169 (40%), Gaps = 44/169 (26%)
Query: 486 GEGSQGQMYRGRLKNG---TFVAIRCLKMKKCHST----RNFMHHIELISKL-RHRHLVS 537
GEG+ GQ+ + R+K AI K K +++ R+F +E++ KL H ++++
Sbjct: 34 GEGNFGQVLKARIKKDGLRMDAAI---KRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90
Query: 538 ALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSW-------------ISEGHAHQSLTWTQ 584
LG C ++L EY P+G L + +L+ Q
Sbjct: 91 LLGACEHR-------GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 143
Query: 585 RISAAIGVAKGIQFLHTGIVPGVFSNNLKITD-----ILLDQNLVAKIS 628
+ A VA+G+ +L D IL+ +N VAKI+
Sbjct: 144 LLHFAADVARGMDYLS--------QKQFIHRDLAARNILVGENYVAKIA 184
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 4e-11
Identities = 31/162 (19%), Positives = 61/162 (37%), Gaps = 34/162 (20%)
Query: 486 GEGSQGQMYRGRLKNG------TFVAIRCLKMKKCHSTRN-FMHHIELISKLRHRHLVSA 538
G+GS G +Y G K T VAI+ + R F++ ++ + H+V
Sbjct: 34 GQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRL 93
Query: 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSW-------ISEGHAHQSLTWTQRISAAIG 591
LG + +I E + G L+S+ ++ + ++ I A
Sbjct: 94 LGVVSQ---GQP----TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGE 146
Query: 592 VAKGIQFLHTGIVPGVFSNN-----LKITDILLDQNLVAKIS 628
+A G+ +L+ +N L + ++ ++ KI
Sbjct: 147 IADGMAYLN--------ANKFVHRDLAARNCMVAEDFTVKIG 180
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 63.4 bits (155), Expect = 5e-11
Identities = 34/157 (21%), Positives = 61/157 (38%), Gaps = 34/157 (21%)
Query: 486 GEGSQGQMYRGRLKNG----TFVAIRCLKMKKCHST----RNFMHHIELISKLRHRHLVS 537
G G G +Y G L + A+ K + F+ ++ H +++S
Sbjct: 34 GRGHFGCVYHGTLLDNDGKKIHCAV---KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 538 ALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI-SEGHAHQSLTWTQRISAAIGVAKGI 596
LG C S ++ Y+ +G LR++I +E H + T I + VAKG+
Sbjct: 91 LLGICLR------SEGSPLVVLPYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGM 141
Query: 597 QFLHTGIVPGVFSNN-----LKITDILLDQNLVAKIS 628
++L S L + +LD+ K++
Sbjct: 142 KYLA--------SKKFVHRDLAARNCMLDEKFTVKVA 170
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 63.4 bits (155), Expect = 8e-11
Identities = 30/156 (19%), Positives = 60/156 (38%), Gaps = 33/156 (21%)
Query: 486 GEGSQGQMYRGRLKNG-----TFVAIRCLK---MKKCHSTRNFMHHIELISKLRHRHLVS 537
G G+ G +Y+G VAI+ L+ K + + + +++ + + H+
Sbjct: 24 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKEILDEAYVMASVDNPHVCR 81
Query: 538 ALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQ 597
LG C S + LI + +P G L ++ E + + ++ + +AKG+
Sbjct: 82 LLGICLT--------STVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMN 131
Query: 598 FLHTGIVPGVFSNNLKITD-----ILLDQNLVAKIS 628
+L L D +L+ KI+
Sbjct: 132 YLE--------DRRLVHRDLAARNVLVKTPQHVKIT 159
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 8e-11
Identities = 33/155 (21%), Positives = 58/155 (37%), Gaps = 30/155 (19%)
Query: 486 GEGSQGQMYRGRLK----NGTFVAIRCLK---MKKCHSTRNFMHHIELISKLRHRHLVSA 538
G+GS G + RG VA++CLK + + + +F+ + + L HR+L+
Sbjct: 27 GDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRL 86
Query: 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQF 598
G + ++ E P G+L + + H A+ VA+G+ +
Sbjct: 87 YGVVLT--------PPMKMVTELAPLGSLLDRLRKHQGH--FLLGTLSRYAVQVAEGMGY 136
Query: 599 LHTGIVPGVFSNNLKITD-----ILLDQNLVAKIS 628
L S D +LL + KI
Sbjct: 137 LE--------SKRFIHRDLAARNLLLATRDLVKIG 163
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 8e-11
Identities = 31/164 (18%), Positives = 54/164 (32%), Gaps = 29/164 (17%)
Query: 146 AIPQELSILTSLQTLILDENMLAGRVPD-WLGSLPILAVLSLRNNMFNGTLPDSFSYLEN 204
IP+ + L L+ N LP L ++ NN +F
Sbjct: 25 KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASG 82
Query: 205 LRVLALSNNHFYGEVP--DFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSA 262
+ + L++N V F GL L+ L L +N + +
Sbjct: 83 VNEILLTSNRL-ENVQHKMFKGLESLKTLMLRSNRI----------------------TC 119
Query: 263 IPAEV-SSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADN 305
+ + ++ L L N+ P A +L S++ LN+ N
Sbjct: 120 VGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLAN 163
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 3e-06
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 2/112 (1%)
Query: 105 KLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQEL-SILTSLQTLILD 163
KLP L+ + + + G S + + ++SN L + ++ L SL+TL+L
Sbjct: 55 KLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLE-NVQHKMFKGLESLKTLMLR 113
Query: 164 ENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHF 215
N + D L + +LSL +N P +F L +L L L N F
Sbjct: 114 SNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPF 165
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 8e-06
Identities = 25/135 (18%), Positives = 42/135 (31%), Gaps = 31/135 (22%)
Query: 204 NLRVLALSNNHFYGEVPD--FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRS 261
L L+NN F F L L+ ++ NN + +
Sbjct: 33 YTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKI----------------------T 70
Query: 262 AIPAEV-SSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLT---GKLFDDLSC 317
I + + L+SNR + L S+ L + N++T F L
Sbjct: 71 DIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGL-- 128
Query: 318 NPELGFVDLSSNLLT 332
+ + L N +T
Sbjct: 129 -SSVRLLSLYDNQIT 142
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 8e-04
Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 10/81 (12%)
Query: 261 SAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLS-LPSITYLNIADNKLTG---KLFDDLS 316
+ IP + Y L L++N F + LP + +N ++NK+T F+ S
Sbjct: 24 NKIPEHIPQY--TAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGAS 81
Query: 317 CNPELGFVDLSSNLLTGQLPN 337
+ + L+SN L + +
Sbjct: 82 ---GVNEILLTSNRLEN-VQH 98
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 63.2 bits (154), Expect = 1e-10
Identities = 35/154 (22%), Positives = 62/154 (40%), Gaps = 28/154 (18%)
Query: 486 GEGSQGQMYRGRLKNG----TFVAIRCLKMKKCHSTRN-FMHHIELISKLRHRHLVSALG 540
G G G +Y G L + A++ L + F+ ++ H +++S LG
Sbjct: 98 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLG 157
Query: 541 HCFECYFDDSSVSRIFLIFEYVPNGTLRSWI-SEGHAHQSLTWTQRISAAIGVAKGIQFL 599
C S ++ Y+ +G LR++I +E H + T I + VAKG++FL
Sbjct: 158 ICLR------SEGSPLVVLPYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKFL 208
Query: 600 HTGIVPGVFSNN-----LKITDILLDQNLVAKIS 628
S L + +LD+ K++
Sbjct: 209 A--------SKKFVHRDLAARNCMLDEKFTVKVA 234
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 2e-10
Identities = 30/152 (19%), Positives = 56/152 (36%), Gaps = 27/152 (17%)
Query: 486 GEGSQGQMYRGRLKNG---TFVAIRCLKM-KKCHSTRNFMHHIELISKLRHRHLVSALGH 541
G G+ G + +G + VAI+ LK + T M +++ +L + ++V +G
Sbjct: 19 GCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGV 78
Query: 542 CFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHT 601
C + L+ E G L ++ + + V+ G+++L
Sbjct: 79 CQA--------EALMLVMEMAGGGPLHKFLVGKREE--IPVSNVAELLHQVSMGMKYLE- 127
Query: 602 GIVPGVFSNN-----LKITDILLDQNLVAKIS 628
N L ++LL AKIS
Sbjct: 128 -------EKNFVHRDLAARNVLLVNRHYAKIS 152
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 2e-10
Identities = 60/306 (19%), Positives = 89/306 (29%), Gaps = 58/306 (18%)
Query: 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGL----WGPLSGKISR 129
I L I S + L L +V+RL GL +S +
Sbjct: 3 LDIQSLDIQCE--------ELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRV 54
Query: 130 LSSLEILNMSSNFLNGAIPQELSIL-----TSLQTLILDENML----AGRVPDWLGSLPI 180
+L LN+ SN L + +Q L L L G + L +LP
Sbjct: 55 NPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPT 114
Query: 181 LAVLSLRNNMFNGT--------LPDSFSYLENLRVLALSNNHFYGE-----VPDFSGLTY 227
L L L +N+ L D LE L+ L
Sbjct: 115 LQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQ---LEYCSLSAASCEPLASVLRAKPD 171
Query: 228 LQVLDLENNALGPQ--------FPKVGKKLVTMILSKNKFR----SAIPAEVSSYYQLQR 275
+ L + NN + +L + L + V+S L+
Sbjct: 172 FKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRE 231
Query: 276 LDLSSNRF----VGPFPQALL-SLPSITYLNIADNKLTGK----LFDDLSCNPELGFVDL 326
L L SN+ + LL + L I + +T K L L L + L
Sbjct: 232 LALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSL 291
Query: 327 SSNLLT 332
+ N L
Sbjct: 292 AGNELG 297
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 6e-05
Identities = 43/244 (17%), Positives = 77/244 (31%), Gaps = 49/244 (20%)
Query: 132 SLEILNMSSNFLN----GAIPQELSILTSLQTLILDENMLAGR-----VPDWLGSLPILA 182
LE L + S + + ++ SL+ L L N L P L L
Sbjct: 200 QLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLR 259
Query: 183 VLSLRNNMFN----GTLPDSFSYLENLRVLALSNNHFYGE-VPDFSGL-----TYLQVLD 232
L + G L E+L+ L+L+ N E L+ L
Sbjct: 260 TLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLW 319
Query: 233 LENNALGPQF-------PKVGKKLVTMILSKNKFRSA-----IPAEVSSYYQLQRLDLSS 280
+++ + + L+ + +S N+ A L+ L L+
Sbjct: 320 VKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLAD 379
Query: 281 NRF----VGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLP 336
LL+ S+ L++++N L + G + L ++ + P
Sbjct: 380 CDVSDSSCSSLAATLLANHSLRELDLSNNCLG-----------DAGILQLVESV---RQP 425
Query: 337 NCLL 340
CLL
Sbjct: 426 GCLL 429
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 62.1 bits (151), Expect = 2e-10
Identities = 45/309 (14%), Positives = 98/309 (31%), Gaps = 71/309 (22%)
Query: 486 GEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHH-----------------IELIS 528
+G ++ K+ F A++ + R+F +++I+
Sbjct: 40 NQGKFNKIILCE-KDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIIT 98
Query: 529 KLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISA 588
+++ + + C + +++I+EY+ N ++ + +T I
Sbjct: 99 DIKNEYCL----TCEG-IITNYD--EVYIIYEYMENDSILKFDEY-FFVLDKNYTCFIPI 150
Query: 589 AIG------VAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENA--- 639
+ V ++H + ++K ++IL+D+N K+S + +
Sbjct: 151 QVIKCIIKSVLNSFSYIHNEK--NICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIK 208
Query: 640 -----------EKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRP--LKS 686
E + Y+G K+DI+ G+ L +
Sbjct: 209 GSRGTYEFMPPEFFSNESSYNG-------------AKVDIWSLGICLYVMFYNVVPFSLK 255
Query: 687 RKEVDLLKNQLQAVVT-----ADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA 741
V+L N + + + L ++ L KNPA
Sbjct: 256 ISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLK---LFLRKNPA 312
Query: 742 ERPSVEDVL 750
ER + ED L
Sbjct: 313 ERITSEDAL 321
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 61.5 bits (150), Expect = 2e-10
Identities = 37/167 (22%), Positives = 66/167 (39%), Gaps = 39/167 (23%)
Query: 486 GEGSQGQMYRGRLKNG------TFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSAL 539
GEG+ G+++ N VA++ LK + ++F EL++ L+H H+V
Sbjct: 24 GEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFY 83
Query: 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSW-------------ISEGHAHQSLTWTQRI 586
G C + + ++FEY+ +G L + A L +Q +
Sbjct: 84 GVCGDG-------DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQML 136
Query: 587 SAAIGVAKGIQFLHTGIVPGVFSNN-----LKITDILLDQNLVAKIS 628
A +A G+ +L S + L + L+ NL+ KI
Sbjct: 137 HIASQIASGMVYLA--------SQHFVHRDLATRNCLVGANLLVKIG 175
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 61.5 bits (150), Expect = 2e-10
Identities = 29/154 (18%), Positives = 57/154 (37%), Gaps = 28/154 (18%)
Query: 486 GEGSQGQMYRGRLKNG----TFVAIRCLKMKKCHSTRN-FMHHIELISKLRHRHLVSALG 540
G+G G +Y G + AI+ L F+ L+ L H ++++ +G
Sbjct: 30 GKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIG 89
Query: 541 HCFECYFDDSSVSRIFLIFEYVPNGTLRSWI-SEGHAHQSLTWTQRISAAIGVAKGIQFL 599
++ Y+ +G L +I S + T IS + VA+G+++L
Sbjct: 90 IMLP------PEGLPHVLLPYMCHGDLLQFIRSPQR---NPTVKDLISFGLQVARGMEYL 140
Query: 600 HTGIVPGVFSNN-----LKITDILLDQNLVAKIS 628
L + +LD++ K++
Sbjct: 141 A--------EQKFVHRDLAARNCMLDESFTVKVA 166
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 2e-10
Identities = 70/324 (21%), Positives = 130/324 (40%), Gaps = 65/324 (20%)
Query: 486 GEGSQGQMYRGRLKNG----TFVAIRCLK---MKKCHSTRNFMHHIELISKLRHRHLVSA 538
G G G++ GRLK VAI+ LK +K R+F+ ++ + H +++
Sbjct: 54 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK--QRRDFLGEASIMGQFDHPNIIRL 111
Query: 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQF 598
G + + ++ EY+ NG+L S++ + H Q T Q + G+A G+++
Sbjct: 112 EGVV-------TKSKPVMIVTEYMENGSLDSFLRK-HDAQ-FTVIQLVGMLRGIASGMKY 162
Query: 599 LHTGIVPGVFSNN-----LKITDILLDQNLVAKISSYNL-PLLAENAE----KVGHVIPY 648
L L +IL++ NLV K+S + L +L ++ E G IP
Sbjct: 163 LS--------DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIP- 213
Query: 649 SGSID---PTNSARGKLEEKIDIYDFGLILLEII-VGR---PLKSRKEVDLLKNQLQAVV 701
I P A K D++ +G++L E++ G S ++V ++AV
Sbjct: 214 ---IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV------IKAV- 263
Query: 702 TADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQD 761
+ R + P C + M++ C K+ RP E ++ L +
Sbjct: 264 ---DEGYR-LPPP---MDCPAALYQLMLD----CWQKDRNNRPKFEQIVSILDKLIRNPG 312
Query: 762 AWHSQSSEGSPISPPRPSRQHLSF 785
+ +S + S + ++
Sbjct: 313 SLKIITSAAARPSNLLLDQSNVDI 336
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 61.1 bits (149), Expect = 3e-10
Identities = 28/154 (18%), Positives = 56/154 (36%), Gaps = 31/154 (20%)
Query: 486 GEGSQGQMYRGRLKNG---TFVAIRCLK---MKKCHSTRNFMHHIELISKLRHRHLVSAL 539
G G+ G + +G + VA++ LK + ++ +L + ++V +
Sbjct: 26 GSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDP-ALKDELLAEANVMQQLDNPYIVRMI 84
Query: 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFL 599
G C L+ E G L ++ + ++ + I V+ G+++L
Sbjct: 85 GIC--------EAESWMLVMEMAELGPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYL 133
Query: 600 HTGIVPGVFSNN-----LKITDILLDQNLVAKIS 628
+N L ++LL AKIS
Sbjct: 134 E--------ESNFVHRDLAARNVLLVTQHYAKIS 159
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 3e-10
Identities = 36/163 (22%), Positives = 58/163 (35%), Gaps = 28/163 (17%)
Query: 146 AIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENL 205
IP L ++ + L++N + P L + L NN + PD+F L +L
Sbjct: 25 EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSL 82
Query: 206 RVLALSNNHFYGEVPD--FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAI 263
L L N E+P F GL LQ+L L N + + +
Sbjct: 83 NSLVLYGNKI-TELPKSLFEGLFSLQLLLLNANKI----------------------NCL 119
Query: 264 PAEV-SSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADN 305
+ + L L L N+ L +I +++A N
Sbjct: 120 RVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQN 162
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 6e-06
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 129 RLSSLEILNMSSNFLNGAIPQEL-SILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLR 187
L SL L + N + +P+ L L SLQ L+L+ N + D L L +LSL
Sbjct: 78 GLRSLNSLVLYGNKIT-ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLY 136
Query: 188 NNMFNGTLPDSFSYLENLRVLALSNNHF 215
+N +FS L ++ + L+ N F
Sbjct: 137 DNKLQTIAKGTFSPLRAIQTMHLAQNPF 164
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 3e-10
Identities = 27/125 (21%), Positives = 50/125 (40%), Gaps = 18/125 (14%)
Query: 486 GEGSQGQMYRGRLKNG------TFVAIRCLKMKKCHSTRN-FMHHIELISKLRHRHLVSA 538
G G+ G++Y G++ VA++ L F+ +ISK H+++V
Sbjct: 39 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 98
Query: 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI----SEGHAHQSLTWTQRISAAIGVAK 594
+G + F++ E + G L+S++ SL + A +A
Sbjct: 99 IGVSLQS-------LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 151
Query: 595 GIQFL 599
G Q+L
Sbjct: 152 GCQYL 156
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 3e-10
Identities = 27/125 (21%), Positives = 50/125 (40%), Gaps = 18/125 (14%)
Query: 486 GEGSQGQMYRGRLKNG------TFVAIRCLKMKKCHSTRN-FMHHIELISKLRHRHLVSA 538
G G+ G++Y G++ VA++ L F+ +ISK H+++V
Sbjct: 80 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 139
Query: 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI----SEGHAHQSLTWTQRISAAIGVAK 594
+G + F++ E + G L+S++ SL + A +A
Sbjct: 140 IGVSLQS-------LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 192
Query: 595 GIQFL 599
G Q+L
Sbjct: 193 GCQYL 197
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 60.3 bits (147), Expect = 4e-10
Identities = 36/162 (22%), Positives = 69/162 (42%), Gaps = 29/162 (17%)
Query: 477 NNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCL---KMKKCHSTRNFMHHIELISKLRH 532
++FD +G+G G +Y R +N +A++ L +++K IE+ S LRH
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 533 RHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI------SEGHAHQSLTWTQRI 586
+++ YF D RI+L+ E+ P G L + E + T+ + +
Sbjct: 74 PNILRMYN-----YFHDRK--RIYLMLEFAPRGELYKELQKHGRFDEQRSA---TFMEEL 123
Query: 587 SAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKIS 628
+ A + + H V ++K ++L+ KI+
Sbjct: 124 ADA------LHYCHE---RKVIHRDIKPENLLMGYKGELKIA 156
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 62.1 bits (150), Expect = 5e-10
Identities = 45/256 (17%), Positives = 81/256 (31%), Gaps = 14/256 (5%)
Query: 58 FCNTEPTSSLTVVCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRL--V 115
+ P +SL + + + + + + L + + L L
Sbjct: 300 WLCDLPAASLNDQLPQHTFRVIWTGSDSQKECVLLKDRPECWCRDSATDEQLFRCELSVE 359
Query: 116 SLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWL 175
+ L LE N + + L L + + + L P
Sbjct: 360 KSTVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRA 419
Query: 176 GSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLEN 235
L + F ++RVL L++ + L + LDL +
Sbjct: 420 AYLDD------LRSKFLLENSVLKMEYADVRVLHLAHKDL-TVLCHLEQLLLVTHLDLSH 472
Query: 236 NALGPQFPKVG--KKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVG-PFPQALL 292
N L P + + L + S N + + V++ +LQ L L +NR Q L+
Sbjct: 473 NRLRALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLV 530
Query: 293 SLPSITYLNIADNKLT 308
S P + LN+ N L
Sbjct: 531 SCPRLVLLNLQGNSLC 546
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 56.3 bits (135), Expect = 3e-08
Identities = 36/194 (18%), Positives = 58/194 (29%), Gaps = 7/194 (3%)
Query: 140 SNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSF 199
++ + L L + L S L L N T+
Sbjct: 334 LKDRPECWCRDSATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLM 392
Query: 200 SYLENLRVLALSNNHFYG-EVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNK 258
L+ L + +F + D YL L + + + L+
Sbjct: 393 RALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRSKFLLENSVLKMEYADVRVLHLAHKD 452
Query: 259 FRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCN 318
+ + LDLS NR P AL +L + L +DN L D ++
Sbjct: 453 LTV--LCHLEQLLLVTHLDLSHNRLRA-LPPALAALRCLEVLQASDNALEN--VDGVANL 507
Query: 319 PELGFVDLSSNLLT 332
P L + L +N L
Sbjct: 508 PRLQELLLCNNRLQ 521
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 5e-10
Identities = 25/122 (20%), Positives = 52/122 (42%), Gaps = 17/122 (13%)
Query: 486 GEGSQGQMYRGRLKN--------GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVS 537
G+G+ ++++G + T V ++ L + + +F ++SKL H+HLV
Sbjct: 17 GQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVL 76
Query: 538 ALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQ 597
G C L+ E+V G+L +++ + + ++ A +A +
Sbjct: 77 NYGVCVCG-------DENILVQEFVKFGSLDTYLKKN--KNCINILWKLEVAKQLAAAMH 127
Query: 598 FL 599
FL
Sbjct: 128 FL 129
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 61.2 bits (148), Expect = 5e-10
Identities = 33/296 (11%), Positives = 74/296 (25%), Gaps = 46/296 (15%)
Query: 486 GEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHST---RNFMHHIELISKLRHRHLVSALGH 541
G + ++ R ++ A++ M +S ++L A
Sbjct: 71 RVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDR 130
Query: 542 C-------------------FECYFDDSSVSRIFLIFEYVPNGTLRSWISE----GHAHQ 578
DD +V+ L+ + L S
Sbjct: 131 RRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPA-ASVDLELLFSTLDFVYVFRG 189
Query: 579 SLTWTQRISAAIGVAKGIQFLHT-GIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637
+ + L + G+V G + ++ + + + +
Sbjct: 190 DEGILALHILTAQLIRLAANLQSKGLVHG----HFTPDNLFIMPDGRLMLGDVSALWKVG 245
Query: 638 NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRP---LKSRKEVDLLK 694
V + N++ ++ + GL + + L + K
Sbjct: 246 TRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWK 305
Query: 695 NQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
V D A S L + +KT++ R L + R + +
Sbjct: 306 RPSLRVPGTDSLAFGSCTP-------LPDFVKTLIG---RFLNFDRRRRLLPLEAM 351
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 5e-10
Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 31/155 (20%)
Query: 486 GEGSQGQMYRGRLK----NGTFVAIRCLK---MKKCHSTRNFMHHIELISKLRHRHLVSA 538
G G G++ GRL+ VAI+ LK ++ R+F+ ++ + H +++
Sbjct: 58 GSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTER--QRRDFLSEASIMGQFDHPNIIRL 115
Query: 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQF 598
G ++ EY+ NG+L +++ H Q T Q + GV G+++
Sbjct: 116 EGVVTRG-------RLAMIVTEYMENGSLDTFLRT-HDGQ-FTIMQLVGMLRGVGAGMRY 166
Query: 599 LHTGIVPGVFSNN-----LKITDILLDQNLVAKIS 628
L L ++L+D NLV K+S
Sbjct: 167 LS--------DLGYVHRDLAARNVLVDSNLVCKVS 193
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 6e-10
Identities = 41/192 (21%), Positives = 68/192 (35%), Gaps = 13/192 (6%)
Query: 127 ISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186
++ L +L L + N + L L L++L L+ N + + L LP L L L
Sbjct: 86 LANLKNLGWLFLDENKVKDLSS--LKDLKKLKSLSLEHNGI--SDINGLVHLPQLESLYL 141
Query: 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALG--PQFPK 244
NN T S L L L+L +N ++ +GLT LQ L L N +
Sbjct: 142 GNN--KITDITVLSRLTKLDTLSLEDNQIS-DIVPLAGLTKLQNLYLSKNHISDLRALAG 198
Query: 245 VGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFP---QALLSLPSITYLN 301
+ K L + L + + S+ + + V P P++ +
Sbjct: 199 L-KNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLVTPEIISDDGDYEKPNVKWHL 257
Query: 302 IADNKLTGKLFD 313
+F
Sbjct: 258 PEFTNEVSFIFY 269
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 6e-06
Identities = 23/155 (14%), Positives = 49/155 (31%), Gaps = 10/155 (6%)
Query: 179 PILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNAL 238
P+ + D L + + L + + N+ +
Sbjct: 2 PLGSETITVPTPIKQIFSDD--AFAETIKDNLKKKSV-TDAVTQNELNSIDQIIANNSDI 58
Query: 239 GPQFP-KVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSI 297
+ + + L+ NK P +++ L L L N+ L L +
Sbjct: 59 KSVQGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDLSS--LKDLKKL 114
Query: 298 TYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLT 332
L++ N ++ + L P+L + L +N +T
Sbjct: 115 KSLSLEHNGIS--DINGLVHLPQLESLYLGNNKIT 147
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 8e-10
Identities = 54/324 (16%), Positives = 109/324 (33%), Gaps = 78/324 (24%)
Query: 486 GEGSQGQMYRGRLK-----NGTFVAIRCLKMKKCHSTRN-FMHHIELISKLRHRHLVSAL 539
G G G +++G V I+ ++ K + H+ I L H H+V L
Sbjct: 22 GSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLL 81
Query: 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFL 599
G C S + L+ +Y+P G+L + + L ++ + +AKG+ +L
Sbjct: 82 GLCPG--------SSLQLVTQYLPLGSLLDHVRQHRGA--LGPQLLLNWGVQIAKGMYYL 131
Query: 600 HTGIVPGVFSNNLKITD-----ILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDP 654
+ + + +LL +++ + + L +K
Sbjct: 132 E--------EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK------Q------ 171
Query: 655 TNSARGKL------EEKI---------DIYDFGLILLEII-VGR---PLKSRKEVDLLKN 695
+ K E I D++ +G+ + E++ G EV
Sbjct: 172 LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEV----- 226
Query: 696 QLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755
+ E R + P + C + + +M V+C + + RP+ +++
Sbjct: 227 -PDLL----EKGER-LAQP---QICTID-VYMVM---VKCWMIDENIRPTFKELANEFTR 273
Query: 756 AAQVQDAWHSQSSEGSPISPPRPS 779
A+ + E P P P
Sbjct: 274 MARDPPRYLVIKRESGPGIAPGPE 297
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 59.5 bits (145), Expect = 9e-10
Identities = 38/168 (22%), Positives = 64/168 (38%), Gaps = 40/168 (23%)
Query: 486 GEGSQGQMYRGRLKNG------TFVAIRCLKMKKCHSTRN-FMHHIELISKLRHRHLVSA 538
GE G++Y+G L VAI+ LK K R F H L ++L+H ++V
Sbjct: 18 GEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCL 77
Query: 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSW-------------ISEGHAHQSLTWTQR 585
LG + D + +IF Y +G L + + +L
Sbjct: 78 LGVVTK---DQP----LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF 130
Query: 586 ISAAIGVAKGIQFLHTGIVPGVFSNN-----LKITDILLDQNLVAKIS 628
+ +A G+++L S++ L ++L+ L KIS
Sbjct: 131 VHLVAQIAAGMEYLS--------SHHVVHKDLATRNVLVYDKLNVKIS 170
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 61.0 bits (148), Expect = 9e-10
Identities = 42/244 (17%), Positives = 81/244 (33%), Gaps = 38/244 (15%)
Query: 400 IIGGISLVVIA---FLLVRRTKSKQTMKKTPTRLIQENAS--TGYTSKFLSDARYISQTM 454
+I G +V ++R K + + +L +T Y
Sbjct: 313 LIDGYCRLVNGATQSFIIRPQKEGERALPSIPKLANNEKQGVRSHTVSVSETDDYAEIID 372
Query: 455 KLGALGLPAYRTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNG----TFVAIRCLK 510
+ +P+ R + E + +GEG G +++G + VAI+ K
Sbjct: 373 EEDTYTMPSTR-----DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCK 427
Query: 511 MKKCHSTR-NFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRS 569
S R F+ + + H H+V +G E + +++I E G LRS
Sbjct: 428 NCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE--------NPVWIIMELCTLGELRS 479
Query: 570 WISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNN-----LKITDILLDQNLV 624
++ L I A ++ + +L S + ++L+ N
Sbjct: 480 FLQV-RKFS-LDLASLILYAYQLSTALAYLE--------SKRFVHRDIAARNVLVSSNDC 529
Query: 625 AKIS 628
K+
Sbjct: 530 VKLG 533
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 9e-10
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 8/87 (9%)
Query: 484 FMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHC 542
+G+G+ G +Y GR L N +AI+ + + ++ I L L+H+++V LG
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLG-- 86
Query: 543 FECYFDDSSVSRIFLIFEYVPNGTLRS 569
+ ++ + IF+ E VP G+L +
Sbjct: 87 --SFSENGFIK-IFM--EQVPGGSLSA 108
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 9e-10
Identities = 30/162 (18%), Positives = 59/162 (36%), Gaps = 31/162 (19%)
Query: 478 NFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCL---KMKKCHSTRNFMHHIELISKLRHR 533
+ F+G+G + + A + + + K H I + L H+
Sbjct: 42 RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ 101
Query: 534 HLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLT-------WTQRI 586
H+V F +F+D+ +F++ E +L ++LT Q +
Sbjct: 102 HVVG-----FHGFFEDND--FVFVVLELCRRRSLLELHK---RRKALTEPEARYYLRQIV 151
Query: 587 SAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKIS 628
Q+LH V +LK+ ++ L+++L KI
Sbjct: 152 LG-------CQYLHR---NRVIHRDLKLGNLFLNEDLEVKIG 183
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 59.8 bits (145), Expect = 1e-09
Identities = 52/320 (16%), Positives = 109/320 (34%), Gaps = 54/320 (16%)
Query: 486 GEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLR-HRHLVSALGHCF 543
EG +Y + + +G A++ L + R + + + KL H ++V
Sbjct: 37 AEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAAS 96
Query: 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI 603
+ + FL+ + G L ++ + + L+ + + +Q +H
Sbjct: 97 IGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR-Q 155
Query: 604 VPGVFSNNLKITDILLDQNLVAKI-------SSYNLPLLAENAEKVGHV---IPYSGS-- 651
P + +LK+ ++LL K+ + + P + +A++ V I + +
Sbjct: 156 KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPM 215
Query: 652 ------IDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTAD 704
ID + + EK DI+ G IL + + P E + +
Sbjct: 216 YRTPEIIDL--YSNFPIGEKQDIWALGCILYLLCFRQHPF----EDGAKLRIVNGKYSIP 269
Query: 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWH 764
+ +++ L NP ER S+ +V+ LQ A +
Sbjct: 270 PHDTQY------------TVFHSLIR---AMLQVNPEERLSIAEVVHQLQEIAAAR---- 310
Query: 765 SQSSEGSPISPPRPSRQHLS 784
++P P + L
Sbjct: 311 -------NVNPKSPITELLE 323
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 1e-09
Identities = 29/154 (18%), Positives = 57/154 (37%), Gaps = 29/154 (18%)
Query: 486 GEGSQGQMYRGRLKNG-----TFVAIRCLKMKKCHSTR-NFMHHIELISKLRHRHLVSAL 539
G G+ G +Y+G VAI+ L+ + +++ + + H+ L
Sbjct: 24 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 83
Query: 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFL 599
G C S + LI + +P G L ++ E + + ++ + +AKG+ +L
Sbjct: 84 GICLT--------STVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNYL 133
Query: 600 HTGIVPGVFSNNLKITD-----ILLDQNLVAKIS 628
L D +L+ KI+
Sbjct: 134 E--------DRRLVHRDLAARNVLVKTPQHVKIT 159
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396 | Back alignment and structure |
|---|
Score = 60.2 bits (146), Expect = 1e-09
Identities = 53/303 (17%), Positives = 96/303 (31%), Gaps = 57/303 (18%)
Query: 486 GEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCF 543
G+G+ ++RGR K G AI+ M E++ KL H+++V F
Sbjct: 18 GQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL----F 73
Query: 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHT-G 602
+ ++ LI E+ P G+L + + E L ++ + V G+ L G
Sbjct: 74 AIEEETTT-RHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG 132
Query: 603 IV-------------PGVFSNNLKITD-----ILLDQNLVAKIS---SYNLP-LLAENAE 640
IV + K+TD L D + Y P +
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVL 192
Query: 641 KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQA 699
+ H Y +D++ G+ G P + + K +
Sbjct: 193 RKDHQKKYG--------------ATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYK 238
Query: 700 VVTADESARRSMVDPAVNKA-----------CLDESLKTMMEVCVRCLL-KNPAERPSVE 747
++T S S V A N L L+ ++ + +L + + +
Sbjct: 239 IITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFD 298
Query: 748 DVL 750
Sbjct: 299 QFF 301
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 59.1 bits (144), Expect = 1e-09
Identities = 31/155 (20%), Positives = 55/155 (35%), Gaps = 32/155 (20%)
Query: 486 GEGSQGQMYRGRLKNG----TFVAIRCLK---MKKCHSTRNFMHHIELISKLRHRHLVSA 538
GEG G++Y G N VA++ K + FM ++ L H H+V
Sbjct: 21 GEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLD--NKEKFMSEAVIMKNLDHPHIVKL 78
Query: 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQF 598
+G ++I E P G L ++ SL + ++ + K + +
Sbjct: 79 IGII--------EEEPTWIIMELYPYGELGHYLERN--KNSLKVLTLVLYSLQICKAMAY 128
Query: 599 LHTGIVPGVFSNN-----LKITDILLDQNLVAKIS 628
L S N + + +IL+ K+
Sbjct: 129 LE--------SINCVHRDIAVRNILVASPECVKLG 155
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 60.3 bits (146), Expect = 1e-09
Identities = 30/152 (19%), Positives = 56/152 (36%), Gaps = 27/152 (17%)
Query: 486 GEGSQGQMYRGRLKNG---TFVAIRCLKM-KKCHSTRNFMHHIELISKLRHRHLVSALGH 541
G G+ G + +G + VAI+ LK + T M +++ +L + ++V +G
Sbjct: 345 GCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGV 404
Query: 542 CFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHT 601
C + L+ E G L ++ + + V+ G+++L
Sbjct: 405 C--------QAEALMLVMEMAGGGPLHKFLVGKREE--IPVSNVAELLHQVSMGMKYLE- 453
Query: 602 GIVPGVFSNN-----LKITDILLDQNLVAKIS 628
N L ++LL AKIS
Sbjct: 454 -------EKNFVHRNLAARNVLLVNRHYAKIS 478
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 58.7 bits (143), Expect = 2e-09
Identities = 37/167 (22%), Positives = 74/167 (44%), Gaps = 38/167 (22%)
Query: 477 NNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCL---KMKKCHSTRNFMHHIELISKLRH 532
+F +G+GS +YR + G VAI+ + M K + + +++ +L+H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 533 RHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI-------SEGHA----HQSLT 581
++ YF+DS+ ++L+ E NG + ++ SE A HQ
Sbjct: 71 PSILE-----LYNYFEDSN--YVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQ--- 120
Query: 582 WTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKIS 628
+ G+ +LH+ G+ +L ++++LL +N+ KI+
Sbjct: 121 ----------IITGMLYLHS---HGILHRDLTLSNLLLTRNMNIKIA 154
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 58.7 bits (143), Expect = 2e-09
Identities = 30/162 (18%), Positives = 59/162 (36%), Gaps = 31/162 (19%)
Query: 478 NFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCL---KMKKCHSTRNFMHHIELISKLRHR 533
+ F+G+G + + A + + + K H I + L H+
Sbjct: 16 RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ 75
Query: 534 HLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLT-------WTQRI 586
H+V F +F+D+ +F++ E +L ++LT Q +
Sbjct: 76 HVVG-----FHGFFEDND--FVFVVLELCRRRSLLELHK---RRKALTEPEARYYLRQIV 125
Query: 587 SAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKIS 628
Q+LH V +LK+ ++ L+++L KI
Sbjct: 126 LG-------CQYLHR---NRVIHRDLKLGNLFLNEDLEVKIG 157
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 58.0 bits (141), Expect = 3e-09
Identities = 32/153 (20%), Positives = 57/153 (37%), Gaps = 28/153 (18%)
Query: 486 GEGSQGQMYRGRLKNG----TFVAIRCLKMKKCHSTR-NFMHHIELISKLRHRHLVSALG 540
GEG G +++G + VAI+ K S R F+ + + H H+V +G
Sbjct: 24 GEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG 83
Query: 541 HCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLH 600
E + +++I E G LRS++ SL I A ++ + +L
Sbjct: 84 VITE--------NPVWIIMELCTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLE 133
Query: 601 TGIVPGVFSNN-----LKITDILLDQNLVAKIS 628
S + ++L+ N K+
Sbjct: 134 --------SKRFVHRDIAARNVLVSSNDCVKLG 158
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 3e-09
Identities = 35/178 (19%), Positives = 65/178 (36%), Gaps = 52/178 (29%)
Query: 486 GEGSQGQMYRGRLKNG------TFVAIRCLKMKKCHSTRN-FMHHIELISKLRHRHLVSA 538
GEG+ G++++ R T VA++ LK + + F L+++ + ++V
Sbjct: 56 GEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKL 115
Query: 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSW---------------------ISEGHAH 577
LG C + L+FEY+ G L +
Sbjct: 116 LGVCAV---GKP----MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGP 168
Query: 578 QSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKIT--D-----ILLDQNLVAKIS 628
L+ +++ A VA G+ +L + K D L+ +N+V KI+
Sbjct: 169 PPLSCAEQLCIARQVAAGMAYL----------SERKFVHRDLATRNCLVGENMVVKIA 216
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 58.0 bits (141), Expect = 4e-09
Identities = 39/174 (22%), Positives = 62/174 (35%), Gaps = 50/174 (28%)
Query: 486 GEGSQGQMYRGRLKN------GTFVAIRCLKMKKCHST----RNFMHHIELISKL-RHRH 534
G G+ GQ+ VA+ KM K +T R M ++++ + H +
Sbjct: 36 GRGAFGQVIEADAFGIDKTATCRTVAV---KMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 535 LVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSW-------------ISEGHAHQSLT 581
+V+ LG C + + +I E+ G L ++ E LT
Sbjct: 93 VVNLLGACTK------PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 582 WTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKIT--D-----ILLDQNLVAKIS 628
I + VAKG++FL + K D ILL + V KI
Sbjct: 147 LEHLICYSFQVAKGMEFL----------ASRKCIHRDLAARNILLSEKNVVKIC 190
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 4e-09
Identities = 71/317 (22%), Positives = 126/317 (39%), Gaps = 62/317 (19%)
Query: 486 GEGSQGQMYRGRLKNGTF-----VAIRCLKMKKCHSTR-NFMHHIELISKLRHRHLVSAL 539
G G G++Y+G LK + VAI+ LK R +F+ ++ + H +++
Sbjct: 53 GAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLE 112
Query: 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFL 599
G S + +I EY+ NG L ++ E + Q + G+A G+++L
Sbjct: 113 GVI-------SKYKPMMIITEYMENGALDKFLREK--DGEFSVLQLVGMLRGIAAGMKYL 163
Query: 600 HTGIVPGVFSNN-----LKITDILLDQNLVAKISSYNL-PLLAENAE----KVGHVIPYS 649
+ N L +IL++ NLV K+S + L +L ++ E G IP
Sbjct: 164 A--------NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIP-- 213
Query: 650 GSID---PTNSARGKLEEKIDIYDFGLILLEII-VGR---PLKSRKEVDLLKNQLQAVVT 702
I P + K D++ FG+++ E++ G S EV ++A+
Sbjct: 214 --IRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEV------MKAI-- 263
Query: 703 ADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDA 762
R + P C + MM+ C + A RP D++ L + D+
Sbjct: 264 --NDGFR-LPTP---MDCPSAIYQLMMQ----CWQQERARRPKFADIVSILDKLIRAPDS 313
Query: 763 WHSQSSEGSPISPPRPS 779
+ + +S PS
Sbjct: 314 LKTLADFDPRVSIRLPS 330
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 58.0 bits (141), Expect = 4e-09
Identities = 35/167 (20%), Positives = 63/167 (37%), Gaps = 39/167 (23%)
Query: 486 GEGSQGQMYRGRLK------NGTFVAIRCLKMKKCHSTRN-FMHHIELISKL-RHRHLVS 537
G G+ G++ VA++ LK + M ++++S L +H ++V+
Sbjct: 55 GAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVN 114
Query: 538 ALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSW-----------ISEGHAHQSLTWTQRI 586
LG C + + +I EY G L ++ + A+ + + +
Sbjct: 115 LLGAC-------THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLL 167
Query: 587 SAAIGVAKGIQFLHTGIVPGVFSNNLKITD-----ILLDQNLVAKIS 628
+ VA+G+ FL S N D +LL VAKI
Sbjct: 168 HFSSQVAQGMAFLA--------SKNCIHRDVAARNVLLTNGHVAKIG 206
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 5e-09
Identities = 44/166 (26%), Positives = 60/166 (36%), Gaps = 10/166 (6%)
Query: 146 AIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENL 205
++P I + L L LA L L L+L N F L L
Sbjct: 28 SVPSG--IPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTEL 85
Query: 206 RVLALSNNHFYGEVPD--FSGLTYLQVLDLENNALGPQFPKVGKKLV---TMILSKNKFR 260
L L+NN +P F LT L L L N L V +L + L+ N+ +
Sbjct: 86 GTLGLANNQL-ASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ 144
Query: 261 SAIPAEV-SSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADN 305
S IPA LQ L LS+N+ A L + + + N
Sbjct: 145 S-IPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGN 189
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 57.8 bits (139), Expect = 5e-09
Identities = 23/95 (24%), Positives = 33/95 (34%), Gaps = 3/95 (3%)
Query: 146 AIPQELSILTSLQTLILDENMLAGRVPDW-LGSLPILAVLSLRNNMFNGTLPDSFSYLEN 204
L +L L ++ + L L L L++ + PD+F +
Sbjct: 22 DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPR 81
Query: 205 LRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNAL 238
L L LS N GL+ LQ L L N L
Sbjct: 82 LSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPL 115
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 47.8 bits (113), Expect = 8e-06
Identities = 22/117 (18%), Positives = 34/117 (29%), Gaps = 29/117 (24%)
Query: 220 PDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEV-SSYYQLQRLDL 278
G L L +EN + + +L+ L +
Sbjct: 25 HHLPGAENLTELYIENQ--------------------QHLQH-LELRDLRGLGELRNLTI 63
Query: 279 SSNRFVGPFPQALLSLPSITYLNIADNKLT---GKLFDDLSCNPELGFVDLSSNLLT 332
+ P A P ++ LN++ N L K LS L + LS N L
Sbjct: 64 VKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS----LQELVLSGNPLH 116
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 42.4 bits (99), Expect = 4e-04
Identities = 17/90 (18%), Positives = 29/90 (32%), Gaps = 1/90 (1%)
Query: 262 AIPAEVSSYYQLQRLDLSSNRFVGPFP-QALLSLPSITYLNIADNKLTGKLFDDLSCNPE 320
+ L L + + + + + L L + L I + L D P
Sbjct: 22 DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPR 81
Query: 321 LGFVDLSSNLLTGQLPNCLLAGSKNRVVLY 350
L ++LS N L + S +VL
Sbjct: 82 LSRLNLSFNALESLSWKTVQGLSLQELVLS 111
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 7e-09
Identities = 46/293 (15%), Positives = 96/293 (32%), Gaps = 72/293 (24%)
Query: 486 GEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTR---NFMHHIELISKLRHRHLVSALGH 541
G G ++YR L +G VA++ +++ + + + I+L+ +L H +++
Sbjct: 41 GRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIK---- 96
Query: 542 CFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRI-SAAIGVAKGIQFLH 600
+ + +D+ + ++ E G L I + L + + + + ++ +H
Sbjct: 97 YYASFIEDNE---LNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH 153
Query: 601 TGIVPGVFSNN-----LKITDILLDQNLVAKISSYNLP-LLAENAEK----VG------- 643
S +K ++ + V K+ L + VG
Sbjct: 154 --------SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSP 205
Query: 644 ---HVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRP---LKSRKEVDLLKNQL 697
H Y+ K DI+ G +L E+ + L K
Sbjct: 206 ERIHENGYN--------------FKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE 251
Query: 698 QAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
Q P + E L+ ++ C+ +P +RP V V
Sbjct: 252 QCDY------------PPLPSDHYSEELR---QLVNMCINPDPEKRPDVTYVY 289
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 8e-09
Identities = 29/111 (26%), Positives = 39/111 (35%), Gaps = 6/111 (5%)
Query: 128 SRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLR 187
S + L + N SN G + L+ L L + + L L L L L
Sbjct: 17 SDVKELVLDNSRSN--EGKLEGLTDEFEELEFLSTINVGLT-SIAN-LPKLNKLKKLELS 72
Query: 188 NNMFNGTLPDSFSYLENLRVLALSNNHF--YGEVPDFSGLTYLQVLDLENN 236
+N +G L NL L LS N + L L+ LDL N
Sbjct: 73 DNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNC 123
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 2e-06
Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 5/91 (5%)
Query: 125 GKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVL 184
G LE L+ + L +I L L L+ L L +N ++G + P L L
Sbjct: 36 GLTDEFEELEFLSTINVGLT-SIAN-LPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93
Query: 185 SLRNNMFN--GTLPDSFSYLENLRVLALSNN 213
+L N T+ + LENL+ L L N
Sbjct: 94 NLSGNKIKDLSTI-EPLKKLENLKSLDLFNC 123
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 1e-04
Identities = 20/88 (22%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Query: 103 LVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLIL 162
+ +L+ L +++GL ++ + +L+ L+ L +S N ++G + +L L L
Sbjct: 38 TDEFEELEFLSTINVGL-TSIAN-LPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNL 95
Query: 163 DENMLAG-RVPDWLGSLPILAVLSLRNN 189
N + + L L L L L N
Sbjct: 96 SGNKIKDLSTIEPLKKLENLKSLDLFNC 123
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 1e-08
Identities = 37/181 (20%), Positives = 69/181 (38%), Gaps = 58/181 (32%)
Query: 486 GEGSQGQMYRGRLKNG------TFVAIRCLKMKKCHST----RNFMHHIELISKLRHRHL 535
GEG G++ + + T VA+ KM K +++ R+ + ++ ++ H H+
Sbjct: 32 GEGEFGKVVKATAFHLKGRAGYTTVAV---KMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 536 VSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSW---------------------ISEG 574
+ G C + + LI EY G+LR + +
Sbjct: 89 IKLYGACSQD-------GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 575 HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKIT--D-----ILLDQNLVAKI 627
++LT IS A +++G+Q+L +K+ D IL+ + KI
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYL----------AEMKLVHRDLAARNILVAEGRKMKI 191
Query: 628 S 628
S
Sbjct: 192 S 192
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 1e-08
Identities = 49/288 (17%), Positives = 97/288 (33%), Gaps = 59/288 (20%)
Query: 486 GEGSQGQMYRGR-LKNGTFVA---IRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGH 541
G GS G+ + R +G + + M + + + + L+ +L+H ++V
Sbjct: 15 GTGSYGRCQKIRRKSDGKILVWKELDYGSMTE-AEKQMLVSEVNLLRELKHPNIVR---- 69
Query: 542 CFECYFDDSSVSRIFLIFEYVPNGTLRSWISE-GHAHQSLTWTQRISAAIGVAKGIQFLH 600
++ D ++ + ++++ EY G L S I++ Q L + + ++ H
Sbjct: 70 YYDRIIDRTN-TTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH 128
Query: 601 TGIVPG--VFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVI------------ 646
G V +LK ++ LD K+ + L + +
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQM 188
Query: 647 ---PYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVT 702
Y+ EK DI+ G +L E+ P + + +L +
Sbjct: 189 NRMSYN--------------EKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFR 234
Query: 703 ADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
+ L E+ R L RPSVE++L
Sbjct: 235 RIPY-------------RYSDELN---EIITRMLNLKDYHRPSVEEIL 266
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 1e-08
Identities = 35/176 (19%), Positives = 70/176 (39%), Gaps = 53/176 (30%)
Query: 486 GEGSQGQMYRGRL--------KNGTFVAIRCLKMKKCHST----RNFMHHIELISKL-RH 532
GEG+ GQ+ K VA+ KM K +T + + +E++ + +H
Sbjct: 44 GEGAFGQVVMAEAVGIDKDKPKEAVTVAV---KMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 533 RHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSW-------------ISEGHAHQS 579
+++++ LG C + +++I EY G LR + +
Sbjct: 101 KNIINLLGACTQD-------GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 580 LTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKIT--D-----ILLDQNLVAKIS 628
+T+ +S +A+G+++L + K D +L+ +N V KI+
Sbjct: 154 MTFKDLVSCTYQLARGMEYL----------ASQKCIHRDLAARNVLVTENNVMKIA 199
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 56.4 bits (136), Expect = 1e-08
Identities = 38/264 (14%), Positives = 85/264 (32%), Gaps = 62/264 (23%)
Query: 511 MKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSW 570
+ I + ++ V +++ + L+ W
Sbjct: 99 LSSPSPMDAPSVKIRRMDPFSTKNTV-----GQLQPSSPKV--YLYIQMQLCRKENLKDW 151
Query: 571 ISEGHAHQSLTWTQRISAAIGVAKGIQFLHT-GIV-----PG-VF---SNNLKITD---- 616
++ + + + I +A+ ++FLH+ G++ P +F + +K+ D
Sbjct: 152 MNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLV 211
Query: 617 ILLDQNLVAKISSYNLPLLAENAEKVG----------HVIPYSGSIDPTNSARGKLEEKI 666
+DQ+ + +P A + +VG H YS K+
Sbjct: 212 TAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYS--------------HKV 257
Query: 667 DIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLK 726
DI+ GLIL E++ ++ E + ++ + ++
Sbjct: 258 DIFSLGLILFELLY--SFSTQMERVRIITDVRNLKFPLLFTQKY---------------P 300
Query: 727 TMMEVCVRCLLKNPAERPSVEDVL 750
+ L +P ERP D++
Sbjct: 301 QEHMMVQDMLSPSPTERPEATDII 324
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 2e-08
Identities = 34/173 (19%), Positives = 68/173 (39%), Gaps = 47/173 (27%)
Query: 486 GEGSQGQMYRGRL--------KNGTFVAIRCLKMKKCHSTRN-FMHHIELISKL-RHRHL 535
GEG GQ+ K VA++ LK + + +E++ + +H+++
Sbjct: 90 GEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNI 149
Query: 536 VSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRS-------------WISEGHAHQSLTW 582
++ LG C + D +++I EY G LR + + +T+
Sbjct: 150 INLLGACTQ---DGP----LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 202
Query: 583 TQRISAAIGVAKGIQFLHTGIVPGVFSNNLKIT--D-----ILLDQNLVAKIS 628
+S +A+G+++L + K D +L+ +N V KI+
Sbjct: 203 KDLVSCTYQLARGMEYL----------ASQKCIHRDLAARNVLVTENNVMKIA 245
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 57.2 bits (137), Expect = 2e-08
Identities = 105/695 (15%), Positives = 188/695 (27%), Gaps = 246/695 (35%)
Query: 100 VTTLVKLPD--LKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELS-ILTS 156
+ ++ D LRL W E++ F+ + +++
Sbjct: 51 IDHIIMSKDAVSGTLRL----FW------TLLSKQEEMVQK---FVEEVLRINYKFLMSP 97
Query: 157 LQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLR---VLALSNN 213
++T E R P S+ + R+ ++N F+ R L L
Sbjct: 98 IKT----EQ----RQP----SMMTRMYIEQRDRLYND--NQVFAKYNVSRLQPYLKLRQA 143
Query: 214 HFYGEVPDFSGLTYLQVLDLENNA-----LGPQFPKVGKK-LVTMILSKNKFRSAIPAEV 267
L L N LG GK + + K + + ++
Sbjct: 144 --------------LLELRPAKNVLIDGVLG-----SGKTWVALDVCLSYKVQCKMDFKI 184
Query: 268 SSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLS 327
++ L+L + + L L I N + D S N +L +
Sbjct: 185 --FW----LNLKNCNSPETVLEMLQKL----LYQIDPNWTSR---SDHSSNIKLRIHSIQ 231
Query: 328 ---SNLLTG-QLPNCLL----AGSKN---------RVVLYARNC-----LAAGNE----- 360
LL NCLL + +++L R L+A
Sbjct: 232 AELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISL 291
Query: 361 NQHPLSFCQNEALA-----VGI----LPLQKKQKQVSKAVLALSIIGGIIGGISLVVIAF 411
+ H ++ +E + + LP + + LSII
Sbjct: 292 DHHSMTLTPDEVKSLLLKYLDCRPQDLPREV--LTTNP--RRLSIIA-----------ES 336
Query: 412 L---LVRRTKSKQTMKKTPTRLIQ---ENASTGYTSK-------FLSDARYISQTMKLGA 458
+ L K T +I+ K F A + + L
Sbjct: 337 IRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSL-- 394
Query: 459 LGLPAYRTFSL-EELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHST 517
+ ++ + D + + L L K+ +
Sbjct: 395 ----------IWFDVIK----SDVMVVVNK----------LHK------YSLVEKQPKES 424
Query: 518 RNFMHHIELISKLR-------HRHLVSALGHCFECY-----FDDSSVSRIFL---IFEYV 562
+ I L K++ HR +V + Y FD + +L + ++
Sbjct: 425 TISIPSIYLELKVKLENEYALHRSIV-------DHYNIPKTFDSDDLIPPYLDQYFYSHI 477
Query: 563 PNGTLRSWISEGHAH-QSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ 621
GH H +++ +R++ +F + LD
Sbjct: 478 -----------GH-HLKNIEHPERMT-------------------LFRM------VFLDF 500
Query: 622 N-LVAKI--SSYNLPLLAENAEKVGHVIPYSGSI---DPTNSARGKLEEKIDIYDFGLIL 675
L KI S + + Y I DP I DF L
Sbjct: 501 RFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVN-----AILDF---L 552
Query: 676 LEIIVGRPLKSRKEVDLLKNQLQAVVTA--DESAR 708
+I L K DLL+ L A A +E+ +
Sbjct: 553 PKI--EENLICSKYTDLLRIALMAEDEAIFEEAHK 585
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 55.9 bits (135), Expect = 2e-08
Identities = 43/290 (14%), Positives = 100/290 (34%), Gaps = 72/290 (24%)
Query: 486 GEGSQGQMYRGR-LKNGTFVA---IRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGH 541
GEGS G+ + ++G I +M + +++ ++H ++V
Sbjct: 33 GEGSFGKAILVKSTEDGRQYVIKEINISRMSS-KEREESRREVAVLANMKHPNIV----Q 87
Query: 542 CFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHT 601
E + ++ S ++++ +Y G L I+ Q + + + ++ +H
Sbjct: 88 YRESFEENGS---LYIVMDYCEGGDLFKRINA-QKGVLFQEDQILDWFVQICLALKHVH- 142
Query: 602 GIVPGVFSNN-----LKITDILLDQNLVAKISSYNLP-LLAENAEK----VG-------- 643
+K +I L ++ ++ + + +L E +G
Sbjct: 143 -------DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPE 195
Query: 644 --HVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAV 700
PY+ K DI+ G +L E+ + ++ +L+ +
Sbjct: 196 ICENKPYN--------------NKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGS 241
Query: 701 VTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
P V+ L++++ + +NP +RPSV +L
Sbjct: 242 F------------PPVSL-HYSYDLRSLVS---QLFKRNPRDRPSVNSIL 275
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 56.6 bits (136), Expect = 3e-08
Identities = 56/293 (19%), Positives = 103/293 (35%), Gaps = 33/293 (11%)
Query: 486 GEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTR-NFMHHIELISKLRHRHLVSALGHCF 543
G G G + R G VAI+ + + R + I+++ KL H ++V +
Sbjct: 23 GTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV-SAREVP 81
Query: 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHT-G 602
+ + L EY G LR ++++ L + ++ +++LH
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR 141
Query: 603 IVPGVFSNNLKITDILLD---QNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSA- 658
I+ +LK +I+L Q L+ KI + E + G+ A
Sbjct: 142 IIH----RDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFV---GT--LQYLAP 192
Query: 659 ---RGKL-EEKIDIYDFGLILLEIIVG-RPLKSRKEVDLLKNQLQAVVTAD--------E 705
K +D + FG + E I G RP + +++
Sbjct: 193 ELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTG 252
Query: 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLK-NPAERPSVEDVLWNLQFAA 757
+ + S V P N L L +E ++C+L + +R + F A
Sbjct: 253 AVKFSSVLPTPNH--LSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQA 303
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 55.5 bits (134), Expect = 3e-08
Identities = 49/266 (18%), Positives = 85/266 (31%), Gaps = 56/266 (21%)
Query: 122 PLSGKISRLSSLEILNMSSNFLNG----AIPQELSILTSLQTLILDENMLAGRVPDW--- 174
+ + S++ + +S N + + + ++ L+ + GRV D
Sbjct: 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFT-GRVKDEIPE 81
Query: 175 --------LGSLPILAVLSLRNNMFNGT----LPDSFSYLENLRVLALSNNHF------- 215
L P L + L +N F T L D S L L L NN
Sbjct: 82 ALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAK 141
Query: 216 -------YGEVPDFSGLTYLQVLDLENNALGP-------QFPKVGKKLVTMILSKNKFRS 261
L+ + N L + + + L T+ + +N R
Sbjct: 142 IARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRP 201
Query: 262 -----AIPAEVSSYYQLQRLDLSSNRF----VGPFPQALLSLPSITYLNIADNKLTGK-- 310
+ ++ +L+ LDL N F AL S P++ L + D L+ +
Sbjct: 202 EGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGA 261
Query: 311 --LFDDLSC--NPELGFVDLSSNLLT 332
+ D S N L + L N +
Sbjct: 262 AAVVDAFSKLENIGLQTLRLQYNEIE 287
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 5e-08
Identities = 56/307 (18%), Positives = 105/307 (34%), Gaps = 70/307 (22%)
Query: 476 TNNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHST--RNFMHHIELISKL-R 531
T F +G G G +++ +G AI+ K S +N + + + L +
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 532 HRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIG 591
H H+V F + +D + I EY G+L ISE + S + +
Sbjct: 70 HSHVVR----YFSAWAEDDHML-IQN--EYCNGGSLADAISENYRIMSYFKEAELKDLLL 122
Query: 592 -VAKGIQFLHTGIVPGVFSNN-----LKITDILLDQNLVAKISSYNLPLLAENAEKV--- 642
V +G++++H S + +K ++I + + + +S + KV
Sbjct: 123 QVGRGLRYIH--------SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFK 174
Query: 643 ----GHVIPYSGSIDPTNSARGK--------LEE------KIDIYDFGLILLEIIVGRPL 684
GHV I G L+E K DI+ L ++ PL
Sbjct: 175 IGDLGHV----TRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPL 230
Query: 685 KSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESL-KTMMEVCVRCLLKNPAER 743
+Q + R+ + + + L + E+ + +P R
Sbjct: 231 PR------NGDQWHEI-------RQGRLPR------IPQVLSQEFTELLKVMIHPDPERR 271
Query: 744 PSVEDVL 750
PS ++
Sbjct: 272 PSAMALV 278
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 54.6 bits (132), Expect = 5e-08
Identities = 38/181 (20%), Positives = 63/181 (34%), Gaps = 58/181 (32%)
Query: 486 GEGSQGQMYRGRLKNG------TFVAIRCLKM-KKCHSTR---NFMHHIELISKL-RHRH 534
G G+ G++ VA+ KM K+ + M ++++++L H +
Sbjct: 54 GSGAFGKVMNATAYGISKTGVSIQVAV---KMLKEKADSSEREALMSELKMMTQLGSHEN 110
Query: 535 LVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSW--------------------ISEG 574
+V+ LG C I+LIFEY G L ++ + E
Sbjct: 111 IVNLLGACTL---SGP----IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEE 163
Query: 575 HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKIT--D-----ILLDQNLVAKI 627
LT+ + A VAKG++FL D +L+ V KI
Sbjct: 164 EDLNVLTFEDLLCFAYQVAKGMEFL----------EFKSCVHRDLAARNVLVTHGKVVKI 213
Query: 628 S 628
Sbjct: 214 C 214
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 55.2 bits (133), Expect = 5e-08
Identities = 51/311 (16%), Positives = 105/311 (33%), Gaps = 60/311 (19%)
Query: 478 NFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKL-RHRHLV 536
+F +G G++G + + + VA++ + + ++L+ + H +++
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADR---EVQLLRESDEHPNVI 81
Query: 537 SALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGI 596
F D ++ E TL+ ++ + + G+
Sbjct: 82 ----RYFCTEKDRQFQ---YIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQT--TSGL 131
Query: 597 QFLHT-GIV-----PGVFSNNLKITDILLDQNLVAKISSYNL-PLLAENAEKVGHVIPYS 649
LH+ IV P N+ I+ + A IS + L LA
Sbjct: 132 AHLHSLNIVHRDLKPH----NILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVP 187
Query: 650 GS---IDP---TNSARGKLEEKIDIYDFGLILLEIIV-GRPL---KSRKEVDLLKNQLQA 699
G+ I P + + +DI+ G + +I G +++ ++L
Sbjct: 188 GTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLG---- 243
Query: 700 VVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL-----WN-- 752
+D + D + ++E + + +P +RPS + VL W+
Sbjct: 244 ---------ACSLDCLHPEKHEDVIARELIE---KMIAMDPQKRPSAKHVLKHPFFWSLE 291
Query: 753 --LQFAAQVQD 761
LQF V D
Sbjct: 292 KQLQFFQDVSD 302
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 52.1 bits (125), Expect = 6e-08
Identities = 33/111 (29%), Positives = 43/111 (38%), Gaps = 6/111 (5%)
Query: 128 SRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLR 187
+ + L + N SN +G I + +L+ L L L V + L LP L L L
Sbjct: 24 AAVRELVLDNCKSN--DGKIEGLTAEFVNLEFLSLINVGLI-SVSN-LPKLPKLKKLELS 79
Query: 188 NNMFNGTLPDSFSYLENLRVLALSNNHF--YGEVPDFSGLTYLQVLDLENN 236
N G L L NL L LS N + L L+ LDL N
Sbjct: 80 ENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNC 130
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 6e-06
Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 6/111 (5%)
Query: 106 LPDLKVLRLVSLGL-WGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDE 164
++ L L + G + G + +LE L++ + L L L L+ L L E
Sbjct: 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSE 80
Query: 165 NMLAGRVPDWLGSLPILAVLSLRNNMFN--GTLPDSFSYLENLRVLALSNN 213
N + G + LP L L+L N TL + LE L+ L L N
Sbjct: 81 NRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTL-EPLKKLECLKSLDLFNC 130
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 6e-08
Identities = 35/173 (20%), Positives = 58/173 (33%), Gaps = 47/173 (27%)
Query: 486 GEGSQGQMYRGRLKN------GTFVAIRCLKMKKCHSTRN-FMHHIELISKL-RHRHLVS 537
G G+ G++ VA++ LK + R M ++++S L H ++V+
Sbjct: 32 GAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVN 91
Query: 538 ALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSW---------------ISEGHAHQSLTW 582
LG C + +I EY G L ++ +L
Sbjct: 92 LLGAC-------TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 144
Query: 583 TQRISAAIGVAKGIQFLHTGIVPGVFSNNLKIT--D-----ILLDQNLVAKIS 628
+S + VAKG+ FL + D ILL + KI
Sbjct: 145 EDLLSFSYQVAKGMAFL----------ASKNCIHRDLAARNILLTHGRITKIC 187
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 8e-08
Identities = 34/171 (19%), Positives = 68/171 (39%), Gaps = 43/171 (25%)
Query: 486 GEGSQGQMYRGRLKN--------GTFVAIRCLKMKKCHSTRN-FMHHIELISKL-RHRHL 535
GEG+ GQ+ T VA++ LK + + +E++ + +H+++
Sbjct: 78 GEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNI 137
Query: 536 VSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSW-------------ISEGHAHQSLTW 582
++ LG C + +++I EY G LR + + + L+
Sbjct: 138 INLLGACTQD-------GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 190
Query: 583 TQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITD-----ILLDQNLVAKIS 628
+S A VA+G+++L S D +L+ ++ V KI+
Sbjct: 191 KDLVSCAYQVARGMEYLA--------SKKCIHRDLAARNVLVTEDNVMKIA 233
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 1e-07
Identities = 34/184 (18%), Positives = 60/184 (32%), Gaps = 37/184 (20%)
Query: 127 ISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186
LS ++ N ++ + + T+L+ L L N + L L L LS+
Sbjct: 37 QKELSGVQNFNGDNSNIQSLAG--MQFFTNLKELHLSHNQI--SDLSPLKDLTKLEELSV 92
Query: 187 RNNMFNGTLPDSFSYLE--NLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPK 244
N + + + L L L NN + L L++L + NN L
Sbjct: 93 NRNRLK-----NLNGIPSACLSRLFLDNNELR-DTDSLIHLKNLEILSIRNNKL------ 140
Query: 245 VGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIAD 304
+I + +L+ LDL N L L + ++++
Sbjct: 141 ----------------KSIVM-LGFLSKLEVLDLHGNEITNTGG--LTRLKKVNWIDLTG 181
Query: 305 NKLT 308
K
Sbjct: 182 QKCV 185
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 1e-06
Identities = 26/137 (18%), Positives = 50/137 (36%), Gaps = 15/137 (10%)
Query: 200 SYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNAL----GPQFPKVGKKLVTMILS 255
L N L ++ L+ +Q + +N+ + G QF L + LS
Sbjct: 16 PGLANAVKQNLGKQSV-TDLVSQKELSGVQNFNGDNSNIQSLAGMQFF---TNLKELHLS 71
Query: 256 KNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDL 315
N+ P + +L+ L ++ NR + ++ L + +N+L D L
Sbjct: 72 HNQISDLSP--LKDLTKLEELSVNRNRLKNLNG---IPSACLSRLFLDNNELRD--TDSL 124
Query: 316 SCNPELGFVDLSSNLLT 332
L + + +N L
Sbjct: 125 IHLKNLEILSIRNNKLK 141
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 2e-07
Identities = 22/109 (20%), Positives = 36/109 (33%), Gaps = 5/109 (4%)
Query: 130 LSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNN 189
L++ + I + L + +N + R D L L L + NN
Sbjct: 18 AVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEI--RKLDGFPLLRRLKTLLVNNN 74
Query: 190 MFNGTLPDSFSYLENLRVLALSNNHF--YGEVPDFSGLTYLQVLDLENN 236
L +L L L+NN G++ + L L L + N
Sbjct: 75 RICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRN 123
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 7e-07
Identities = 29/131 (22%), Positives = 51/131 (38%), Gaps = 14/131 (10%)
Query: 89 MLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKI----SRLSSLEILNMSSNFLN 144
M+ L+ + + + + R L L G I + L + ++ S N +
Sbjct: 1 MVKLTAEL---IEQAAQYTNAVRDR--ELDLRGYKIPVIENLGATLDQFDAIDFSDNEIR 55
Query: 145 GAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFN--GTLPDSFSYL 202
+L L+TL+++ N + +LP L L L NN G L D + L
Sbjct: 56 KL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDL-DPLASL 112
Query: 203 ENLRVLALSNN 213
++L L + N
Sbjct: 113 KSLTYLCILRN 123
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 2e-04
Identities = 23/138 (16%), Positives = 45/138 (32%), Gaps = 32/138 (23%)
Query: 197 DSFSYLENLRVLALSNNHFYGEVPDFSGL----TYLQVLDLENNALGPQFPKVGKKLVTM 252
++ R L L ++P L +D +N + +KL
Sbjct: 13 AQYTNAVRDRELDLRGY----KIPVIENLGATLDQFDAIDFSDNEI--------RKLDG- 59
Query: 253 ILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTG-KL 311
+ +L+ L +++NR +LP +T L + +N L
Sbjct: 60 -FPLLR-------------RLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGD 105
Query: 312 FDDLSCNPELGFVDLSSN 329
D L+ L ++ + N
Sbjct: 106 LDPLASLKSLTYLCILRN 123
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 3e-07
Identities = 45/194 (23%), Positives = 73/194 (37%), Gaps = 32/194 (16%)
Query: 153 ILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSN 212
L + + L + + N+ ++ YL N+R LAL
Sbjct: 17 AFAETIKANLKKKSVT-DAVTQNE-LNSIDQIIANNSDIK-SVQ-GIQYLPNVRYLALGG 72
Query: 213 NHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLV---TMILSKNKFRSAIPAEV-S 268
N ++ LT L L L N L V KL ++L +N+ +S +P V
Sbjct: 73 NKL-HDISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQS-LPDGVFD 130
Query: 269 SYYQLQRLDLSSNRFVGPFPQALLSLPS--------ITYLNIADNKLT---GKLFDDLSC 317
L L+L+ N+ L SLP +T L+++ N+L +FD L+
Sbjct: 131 KLTNLTYLNLAHNQ--------LQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLT- 181
Query: 318 NPELGFVDLSSNLL 331
+L + L N L
Sbjct: 182 --QLKDLRLYQNQL 193
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 2e-05
Identities = 47/190 (24%), Positives = 74/190 (38%), Gaps = 30/190 (15%)
Query: 132 SLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMF 191
N+ + A+ Q L S+ +I + + + + LP + L+L N
Sbjct: 20 ETIKANLKKKSVTDAVTQN--ELNSIDQIIANNSDIKSVQG--IQYLPNVRYLALGGNKL 75
Query: 192 NGTLPDSFSYLENLRVLALSNNHFYGEVPD--FSGLTYLQVLDLENNALGPQFPKVGKKL 249
+ + + L NL L L+ N +P+ F LT L+ L L N L V KL
Sbjct: 76 H-DIS-ALKELTNLTYLILTGNQL-QSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKL 132
Query: 250 VTMI---LSKNKFRSAIPAEV-SSYYQLQRLDLSSNRFVGPFPQALLSLP--------SI 297
+ L+ N+ +S +P V L LDLS N+ L SLP +
Sbjct: 133 TNLTYLNLAHNQLQS-LPKGVFDKLTNLTELDLSYNQ--------LQSLPEGVFDKLTQL 183
Query: 298 TYLNIADNKL 307
L + N+L
Sbjct: 184 KDLRLYQNQL 193
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 50.5 bits (121), Expect = 3e-07
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 11/118 (9%)
Query: 123 LSGKISRLSSLEILNMSSNFLNGAIPQ--ELSILTSLQTLILDENMLAGRVPDWLGSLPI 180
+ +S L + + L +S+N I + LS + +L+ L L N++ ++ +
Sbjct: 40 MDATLSTLKACKHLALSTN----NIEKISSLSGMENLRILSLGRNLIK-KIENLDAVADT 94
Query: 181 LAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHF--YGEVPDFSGLTYLQVLDLENN 236
L L + N +L L NLRVL +SNN +GE+ + L L+ L L N
Sbjct: 95 LEELWISYNQIA-SL-SGIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGN 150
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 4e-06
Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 8/120 (6%)
Query: 195 LPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALG--PQFPKVGKKLVTM 252
+ + S L+ + LALS N+ ++ SG+ L++L L N + V L +
Sbjct: 40 MDATLSTLKACKHLALSTNNI-EKISSLSGMENLRILSLGRNLIKKIENLDAVADTLEEL 98
Query: 253 ILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFP--QALLSLPSITYLNIADNKLTGK 310
+S N+ S + + L+ L +S+N+ + + L +L + L +A N L
Sbjct: 99 WISYNQIASL--SGIEKLVNLRVLYMSNNK-ITNWGEIDKLAALDKLEDLLLAGNPLYND 155
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 1e-05
Identities = 34/172 (19%), Positives = 63/172 (36%), Gaps = 28/172 (16%)
Query: 124 SGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENM---LAGRVPDWLGSLPI 180
S + +E+ M + LS L + + L L N ++ L +
Sbjct: 19 SVVATEAEKVELHGMIPPIEK--MDATLSTLKACKHLALSTNNIEKISS-----LSGMEN 71
Query: 181 LAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGP 240
L +LSL N+ + + + + L L +S N + L L+VL + NN +
Sbjct: 72 LRILSLGRNLIK-KIENLDAVADTLEELWISYNQI-ASLSGIEKLVNLRVLYMSNNKIT- 128
Query: 241 QFPKVG-----KKLVTMILSKNKF-RSAIPAEVSSYY---------QLQRLD 277
+ ++ KL ++L+ N +S Y L++LD
Sbjct: 129 NWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD 180
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 4e-07
Identities = 58/287 (20%), Positives = 103/287 (35%), Gaps = 53/287 (18%)
Query: 486 GEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHS---TRNFMHHIELISKLRHRHLVSALGH 541
G G +Y VAI+ + + + F + S+L H+++VS
Sbjct: 20 GGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSM--- 76
Query: 542 CFECYFDDSSVSRI-FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLH 600
D +L+ EY+ TL +I L+ I+ + GI+ H
Sbjct: 77 -----IDVDEEDDCYYLVMEYIEGPTLSEYIESHGP---LSVDTAINFTNQILDGIKHAH 128
Query: 601 T-GIV-----PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE--KVGHVIPYSGS- 651
IV P N IL+D N KI + + + HV+ G+
Sbjct: 129 DMRIVHRDIKPQ---N------ILIDSNKTLKIFDFGIAKALSETSLTQTNHVL---GTV 176
Query: 652 --IDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTADESAR 708
P + +E DIY G++L E++VG P V + +Q V +
Sbjct: 177 QYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDV 236
Query: 709 RSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERP-SVEDVLWNLQ 754
R + +++ V +R K+ A R +++++ +L
Sbjct: 237 RKDIPQSLS------------NVILRATEKDKANRYKTIQEMKDDLS 271
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 1e-06
Identities = 50/288 (17%), Positives = 108/288 (37%), Gaps = 72/288 (25%)
Query: 486 GEGSQGQMYRGR-LKNGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCF 543
G+GS G++++G + VAI+ + +++ + I ++S+ ++ G
Sbjct: 31 GKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG--- 87
Query: 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAI--GVAKGIQFLHT 601
Y D+ ++++I EY+ G+ + G + A I + KG+ +LH+
Sbjct: 88 -SYLKDT---KLWIIMEYLGGGSALDLLEPG------PLDETQIATILREILKGLDYLHS 137
Query: 602 GIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSAR-- 659
++K ++LL ++ K++ + G +G + T R
Sbjct: 138 E---KKIHRDIKAANVLLSEHGEVKLADF------------G----VAGQLTDTQIKRNT 178
Query: 660 ---------------GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704
+ K DI+ G+ +E+ G P ++
Sbjct: 179 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEP-----------------PHSE 221
Query: 705 ESARRSMVDPAVNKA-CLDESL-KTMMEVCVRCLLKNPAERPSVEDVL 750
+ + N L+ + K + E CL K P+ RP+ +++L
Sbjct: 222 LHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELL 269
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 50.4 bits (120), Expect = 1e-06
Identities = 35/250 (14%), Positives = 75/250 (30%), Gaps = 48/250 (19%)
Query: 470 EELEEATNNFDTSAFMGEGSQGQMYRGR------LKNGTFVAIRCLKMKKCHSTRNFMHH 523
E + + +GEG+ Q+Y KN ++ K
Sbjct: 58 TEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQL 117
Query: 524 IELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQS--LT 581
+E + + + + + L+ E GTL + I+ +
Sbjct: 118 MERLKPSMQHMFM----KFYSAHLFQN---GSVLVGELYSYGTLLNAINLYKNTPEKVMP 170
Query: 582 WTQRISAAIGVAKGIQFLHT-GIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE 640
IS A+ + I+ +H I+ G ++K + +L + + ++
Sbjct: 171 QGLVISFAMRMLYMIEQVHDCEIIHG----DIKPDNFILG-------NGFLEQDDEDDLS 219
Query: 641 KVGHVIPYSGSIDPTNSARGKL---------------------EEKIDIYDFGLILLEII 679
+I SID +G + +ID + + ++
Sbjct: 220 AGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCML 279
Query: 680 VGRPLKSRKE 689
G +K + E
Sbjct: 280 FGTYMKVKNE 289
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 2e-06
Identities = 38/128 (29%), Positives = 52/128 (40%), Gaps = 7/128 (5%)
Query: 183 VLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD--FSGLTYLQVLDLENNALGP 240
+L L +N P F L NL+ L L +N G +P F LT L VLDL N L
Sbjct: 44 ILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQLTV 102
Query: 241 QFPKVGKKLV---TMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSI 297
V +LV + + NK +P + L L L N+ A L S+
Sbjct: 103 LPSAVFDRLVHLKELFMCCNKLTE-LPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSL 161
Query: 298 TYLNIADN 305
T+ + N
Sbjct: 162 THAYLFGN 169
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 49.6 bits (117), Expect = 2e-06
Identities = 31/232 (13%), Positives = 69/232 (29%), Gaps = 34/232 (14%)
Query: 137 NMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNM------ 190
+ + I + + L + + W+ + + VL +
Sbjct: 121 GEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIK 180
Query: 191 FNGTLPDSFSYLENLRVLALSNNHFYGEVP------DFSGLTYLQVLDLENNALGPQFPK 244
L NL+ L + + V D L L + +
Sbjct: 181 GTNNLSIGKKPRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFD---- 236
Query: 245 VGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLS---LPSITYLN 301
+ + SK++F + L+ L + + L LP + ++
Sbjct: 237 GDMNVFRPLFSKDRFPN-----------LKWLGIVDAEEQNVVVEMFLESDILPQLETMD 285
Query: 302 IADNKLTGK----LFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVL 349
I+ LT + L D + L F+++ N L+ ++ L ++ +
Sbjct: 286 ISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSLPMKIDV 337
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 2e-06
Identities = 51/259 (19%), Positives = 87/259 (33%), Gaps = 45/259 (17%)
Query: 127 ISRLSSLEILNMSSNFLNGAIPQEL-----SILTSLQTLILDENML----AGRVPDWLGS 177
S + L++S N L EL + S+ +L L N L + + L +
Sbjct: 18 TSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAA 77
Query: 178 LPI-LAVLSLRNNMFNGT----LPDSFSYL-ENLRVLALSNNHFYGE-VPDFSGL----- 225
+P + L+L N + L + + + + VL L N F + +F
Sbjct: 78 IPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLP 137
Query: 226 TYLQVLDLENNALGPQ--------FPKVGKKLVTMILSKNKFRS----AIPAEV--SSYY 271
+ L+L N LG + + + ++ L N S + A+ S
Sbjct: 138 ASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAEL-AKFLASIPA 196
Query: 272 QLQRLDLSSNRF----VGPFPQALLSLP-SITYLNIADNKLTGK----LFDDLSCNPELG 322
+ LDLS+N S+P + LN+ N L G L L
Sbjct: 197 SVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQ 256
Query: 323 FVDLSSNLLTGQLPNCLLA 341
V L +++ A
Sbjct: 257 TVYLDYDIVKNMSKEQCKA 275
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 2e-06
Identities = 27/139 (19%), Positives = 54/139 (38%), Gaps = 23/139 (16%)
Query: 471 ELEEATNNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTRNFMHHIELISK 529
E E + +G GS G+++R + + G A+ KK + + +
Sbjct: 52 EYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAV-----KKVRLEVFRVEELVACAG 106
Query: 530 LRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHA---HQSLTWTQRI 586
L +V G + V+ IF+ E + G+L I + ++L + +
Sbjct: 107 LSSPRIVPLYG----AVREGPWVN-IFM--ELLEGGSLGQLIKQMGCLPEDRALYYLGQA 159
Query: 587 SAAIGVAKGIQFLHT-GIV 604
+G+++LHT I+
Sbjct: 160 ------LEGLEYLHTRRIL 172
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 49.1 bits (117), Expect = 5e-06
Identities = 48/315 (15%), Positives = 99/315 (31%), Gaps = 79/315 (25%)
Query: 486 GEGSQGQMYRG---RLKNGTFVAIRCLKMKKCHSTRN-FMHHIELISKLRHRHLVSALGH 541
G G +Y + NG V ++ L + M + ++++ H +V
Sbjct: 89 AHGGLGWIYLALDRNV-NGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQI--F 145
Query: 542 CFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHT 601
F + D +++ EYV +L+ Q L + I+ + + + +LH+
Sbjct: 146 NFVEHTDRHGDPVGYIVMEYVGGQSLKRSK-----GQKLPVAEAIAYLLEILPALSYLHS 200
Query: 602 -GIV-----PG---VFSNNLKITDILLDQNLVAKISSYNLPL-----LA-ENAEKVGHVI 646
G+V P + LK+ D+ V++I+S+ A E
Sbjct: 201 IGLVYNDLKPENIMLTEEQLKLIDL----GAVSRINSFGYLYGTPGFQAPEIVR--TGPT 254
Query: 647 PYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADES 706
+ DIY G L + + P ++ + V E
Sbjct: 255 VAT-----------------DIYTVGRTLAALTLDLPTRNG----------RYVDGLPED 287
Query: 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERP-SVEDVLWNLQFAAQVQDAWHS 765
+ + R + +P +R + E+ +AQ+
Sbjct: 288 DPVLKTYDSYG------------RLLRRAIDPDPRQRFTTAEE------MSAQLTGVLRE 329
Query: 766 QSSEGSPISPPRPSR 780
++ + + P S
Sbjct: 330 VVAQDTGVPRPGLST 344
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 6e-06
Identities = 46/256 (17%), Positives = 85/256 (33%), Gaps = 54/256 (21%)
Query: 548 DDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHT-GIV-- 604
+ + +++ EYV TLR + +T + I + + F H GI+
Sbjct: 84 ETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSHQNGIIHR 140
Query: 605 ---PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNS---- 657
P N I++ K+ + +A G+ + + ++ T
Sbjct: 141 DVKPA---N------IMISATNAVKVMDFG---IARAIADSGNSVTQTAAVIGTAQYLSP 188
Query: 658 --ARGK-LEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTADESARRSMVD 713
ARG ++ + D+Y G +L E++ G P V + ++ SAR +
Sbjct: 189 EQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP-PSARHEGLS 247
Query: 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPS--------VEDVLWNLQFAAQVQDAWHS 765
++ V ++ L KNP R + V A
Sbjct: 248 ADLD------------AVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKVLTDAE 295
Query: 766 Q----SSEGSPISPPR 777
+ SS +S PR
Sbjct: 296 RTSLLSSAAGNLSGPR 311
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 7e-06
Identities = 56/297 (18%), Positives = 110/297 (37%), Gaps = 66/297 (22%)
Query: 486 GEGSQGQMYRGR-LKNGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCF 543
G G+ + VAI+ + ++KC S + I+ +S+ H ++VS
Sbjct: 24 GSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT--- 80
Query: 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHA---HQSLTWTQRISAAI--GVAKGIQF 598
+ ++L+ + + G++ I A H+S + A I V +G+++
Sbjct: 81 -SFVVKDE---LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEY 136
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKI----------SSYNLPLLAENAEKVG----- 643
LH G ++K +ILL ++ +I + ++ VG
Sbjct: 137 LHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWM 193
Query: 644 --HVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKE-----VDLLKN- 695
V+ D K DI+ FG+ +E+ G + + L+N
Sbjct: 194 APEVMEQVRGYD----------FKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQND 243
Query: 696 --QLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
L+ V E ++ +S + M+ CL K+P +RP+ ++L
Sbjct: 244 PPSLETGVQDKEMLKK-----------YGKSFRKMIS---LCLQKDPEKRPTAAELL 286
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 7e-06
Identities = 56/352 (15%), Positives = 112/352 (31%), Gaps = 80/352 (22%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKL-RHRHL 535
N + +G GS G + G VA++ + + C I+L+++ H ++
Sbjct: 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALM---EIKLLTESDDHPNV 71
Query: 536 VSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAK- 594
+ + C +++ E N L+ + + Q+ I + +
Sbjct: 72 I-----RYYCSETTDRF--LYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQ 123
Query: 595 ---GIQFLHT-GIV----------------------PGVFSNNLKITDILLDQNLVAKIS 628
G+ LH+ I+ G + + I+D L + L + S
Sbjct: 124 IASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQS 183
Query: 629 SYNLPLLAENAEKVG---HVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRP- 683
S+ L G P + +L IDI+ G + I+ G+
Sbjct: 184 SFRTNL----NNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239
Query: 684 --LKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLL-KNP 740
K +E ++++ + + D ++ D + ++ +P
Sbjct: 240 FGDKYSRESNIIRGIF------SLDEMKCLHDRSLIAEATD---------LISQMIDHDP 284
Query: 741 AERPSVEDVL-----WN----LQFAAQVQDAWHSQSSEGSPISPPRPSRQHL 783
+RP+ VL W L+F +V D E PP
Sbjct: 285 LKRPTAMKVLRHPLFWPKSKKLEFLLKVSD-----RLEIENRDPPSALLMKF 331
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 8e-06
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Query: 146 AIPQELSILTSLQTLILDENMLAGRVPDWL-GSLPILAVLSLRNNMFNGTLPDSFSYLEN 204
IP++ I L+L++N L D L G LP L L L+ N G P++F +
Sbjct: 22 EIPRD--IPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASH 79
Query: 205 LRVLALSNNHFYGEVPD--FSGLTYLQVLDLENNAL 238
++ L L N E+ + F GL L+ L+L +N +
Sbjct: 80 IQELQLGENKI-KEISNKMFLGLHQLKTLNLYDNQI 114
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 48.1 bits (114), Expect = 8e-06
Identities = 39/331 (11%), Positives = 83/331 (25%), Gaps = 65/331 (19%)
Query: 486 GEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHST---RNFMHHIELISKLRH-RHLVSALG 540
G+ + G + + + + + + LR ++ A
Sbjct: 87 GQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKV 146
Query: 541 HC-------------------FECYFDDSSVSRIFLIFEYVPNGTL----RSWISEGHAH 577
H D V F ++ L +S H
Sbjct: 147 HLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPR-MQSNLQTFGEVLLSHSSTH 205
Query: 578 QSLTWTQRISAAIGVAKGIQFLHT-GIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636
+SL R+ + V + + LH G+V L+ DI+LDQ ++ + L+
Sbjct: 206 KSLVHHARLQLTLQVIRLLASLHHYGLVHT----YLRPVDIVLDQRGGVFLTGFEH-LVR 260
Query: 637 ENAEKVGHVIPYSGS--------IDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSR 687
+ A V + + + D + GL + I P
Sbjct: 261 DGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDD 320
Query: 688 KEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVE 747
+ + ++ + R + L +R
Sbjct: 321 AALGGSEWIFRSCKNIPQPVR---------------------ALLEGFLRYPKEDRLLPL 359
Query: 748 DVLWNLQFAAQVQDAWHSQSSEGSPISPPRP 778
+ ++ + + + P R
Sbjct: 360 QAMETPEYEQLRTELSAALPLYQTDGEPTRE 390
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 8e-06
Identities = 33/155 (21%), Positives = 64/155 (41%), Gaps = 29/155 (18%)
Query: 486 GEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTRNFMHH----IELISKLRHRHLVSALG 540
GEGS G++ + A++ LK KK N + I+L+ +LRH++++
Sbjct: 14 GEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVI---- 69
Query: 541 HCFECYFDDSSVSRIFLIFEYVPNGTL-------RSWISEGHAHQSLTWTQRISAAIGVA 593
+ +++ +++++ EY G AH Q I
Sbjct: 70 QLVDVLYNEEK-QKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYF--CQLID------ 120
Query: 594 KGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKIS 628
G+++LH+ G+ ++K ++LL KIS
Sbjct: 121 -GLEYLHS---QGIVHKDIKPGNLLLTTGGTLKIS 151
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389 | Back alignment and structure |
|---|
Score = 48.0 bits (114), Expect = 8e-06
Identities = 41/326 (12%), Positives = 89/326 (27%), Gaps = 90/326 (27%)
Query: 486 GEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTR--NFMHHIELISKLRHRHLVSALGHC 542
G + R G +V +R + ++ C + + + H ++V
Sbjct: 36 GFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRA-- 93
Query: 543 FECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAI--GVAKGIQFLH 600
+ D+ ++++ ++ G+ + I + A I GV K + ++H
Sbjct: 94 --TFIADNE---LWVVTSFMAYGSAKDLICTHFMD---GMNELAIAYILQGVLKALDYIH 145
Query: 601 TGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARG 660
G ++K + IL+ + +S + S+ +
Sbjct: 146 HM---GYVHRSVKASHILISVDGKVYLSGLR----------------SNLSMISHGQRQR 186
Query: 661 KLE--------------------------EKIDIYDFGLILLEIIVGRP----------- 683
+ K DIY G+ E+ G
Sbjct: 187 VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQML 246
Query: 684 ----------LKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESL-------- 725
L + + + + S + + + +S
Sbjct: 247 LEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTF 306
Query: 726 -KTMMEVCVRCLLKNPAERPSVEDVL 750
+CL +NP RPS +L
Sbjct: 307 SPHFHHFVEQCLQRNPDARPSASTLL 332
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 2e-05
Identities = 53/281 (18%), Positives = 114/281 (40%), Gaps = 52/281 (18%)
Query: 486 GEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTR--NFMHHIELISKLRHRHLVSALGHC 542
G G+ G++ R K AI+ ++ ++ + + ++ L H +++
Sbjct: 46 GSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIM----KL 101
Query: 543 FECYFDDSSVSRIFLIFEYVPNGTLRSWI-SEGHAHQSLTWTQRISAAI--GVAKGIQFL 599
++ + D + +L+ E G L I + + +A I V G+ +L
Sbjct: 102 YDFFEDKRNY---YLVMECYKGGELFDEIIHRMK------FNEVDAAVIIKQVLSGVTYL 152
Query: 600 HT-GIVPGVFSNNLKITDILL---DQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPT 655
H IV +LK ++LL +++ + KI + L + EN +K+ + G+
Sbjct: 153 HKHNIV----HRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERL---GT--AY 203
Query: 656 NSA----RGKLEEKIDIYDFGLILLEIIVG-RPLKSRKEVDLLKNQLQAVVTADESARRS 710
A R K +EK D++ G+IL ++ G P + + ++L+ + T D ++
Sbjct: 204 YIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKN 263
Query: 711 MVDPAVNKACLDESLKTMMEVCVRCLL-KNPAERPSVEDVL 750
+ + A + ++ +L + R S + L
Sbjct: 264 VSEGAKD--------------LIKQMLQFDSQRRISAQQAL 290
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573 | Back alignment and structure |
|---|
Score = 47.1 bits (112), Expect = 2e-05
Identities = 30/148 (20%), Positives = 57/148 (38%), Gaps = 30/148 (20%)
Query: 486 GEGSQGQMYRGRLKN-GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
G G+ G ++R + G A + + I+ +S LRH LV+ +
Sbjct: 166 GTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVN----LHD 221
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAK----GIQFLH 600
+ DD+ + +I+E++ G L +++ H ++ A+ + G+ +H
Sbjct: 222 AFEDDNEM---VMIYEFMSGGELFEKVADEHNK----MSED--EAVEYMRQVCKGLCHMH 272
Query: 601 T-GIV-----PGVF------SNNLKITD 616
V P SN LK+ D
Sbjct: 273 ENNYVHLDLKPENIMFTTKRSNELKLID 300
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 2e-05
Identities = 30/149 (20%), Positives = 57/149 (38%), Gaps = 32/149 (21%)
Query: 486 GEGSQGQMYRGRLKN-GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
G G GQ+++ G +A + +K + + I ++++L H +L+ ++
Sbjct: 98 GGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQ----LYD 153
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWI-SEGHAHQSLTWTQRISAAIGVAK----GIQFL 599
+ + + L+ EYV G L I E + T+ I K GI+ +
Sbjct: 154 AFESKNDI---VLVMEYVDGGELFDRIIDESYNL-----TEL--DTILFMKQICEGIRHM 203
Query: 600 HT-GIV-----PGVF------SNNLKITD 616
H I+ P + +KI D
Sbjct: 204 HQMYILHLDLKPENILCVNRDAKQIKIID 232
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 3e-05
Identities = 60/282 (21%), Positives = 116/282 (41%), Gaps = 53/282 (18%)
Query: 486 GEGSQGQMYRGRLK-NGTFVAIRCL---KMKKCHSTRNFMHHIELISKLRHRHLVSALGH 541
G+GS G++ + K G A++ + ++K+ + + ++L+ +L H +++
Sbjct: 35 GKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM----K 90
Query: 542 CFECYFDDSSVSRIFLIFEYVPNGTLRSWI-SEGHAHQSLTWTQRISAAIG--VAKGIQF 598
+E + D +L+ E G L I S +++ +A I V GI +
Sbjct: 91 LYEFFEDKGYF---YLVGEVYTGGELFDEIISRKR------FSEVDAARIIRQVLSGITY 141
Query: 599 LHT-GIVPGVFSNNLKITDILL---DQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDP 654
+H IV +LK ++LL ++ +I + L E ++K+ I G+
Sbjct: 142 MHKNKIV----HRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI---GT--A 192
Query: 655 TNSA----RGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTADESARR 709
A G +EK D++ G+IL ++ G P E D+LK + T + +
Sbjct: 193 YYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWK 252
Query: 710 SMVDPAVNKACLDESLKTMMEVCVRCLL-KNPAERPSVEDVL 750
+ + A + +R +L P+ R S D L
Sbjct: 253 KVSESAKD--------------LIRKMLTYVPSMRISARDAL 280
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 3e-05
Identities = 52/280 (18%), Positives = 110/280 (39%), Gaps = 48/280 (17%)
Query: 486 GEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
G+G+ G++Y+ + + G A + ++ K +++ IE+++ H ++V
Sbjct: 28 GDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK----LLG 83
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAI--GVAKGIQFLHTG 602
Y+ D +++++ E+ P G + + + + LT Q I + + + + FLH+
Sbjct: 84 AYYHD---GKLWIMIEFCPGGAVDAIML--ELDRGLTEPQ-I-QVVCRQMLEALNFLHSK 136
Query: 603 IVPGVFSNNLKITDILLDQNLVAKI-----SSYNLPLLAENAEKVGHVIPYSGS---IDP 654
+ +LK ++L+ ++ S+ NL L + +G PY + +
Sbjct: 137 ---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIG--TPYWMAPEVVMC 191
Query: 655 TNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDP 714
+ K DI+ G+ L+E+ P + + R ++
Sbjct: 192 ETMKDTPYDYKADIWSLGITLIEMAQIEP-----------------PHHELNPMRVLLKI 234
Query: 715 AVNKA-CLDESLK---TMMEVCVRCLLKNPAERPSVEDVL 750
A + L K + L KNP RPS +L
Sbjct: 235 AKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLL 274
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 4e-05
Identities = 59/309 (19%), Positives = 120/309 (38%), Gaps = 70/309 (22%)
Query: 486 GEGSQGQMYRGR-LKNGTFVAIRCL--KMKKCHSTRNFMHHIELISKLRHRHLVSALGHC 542
G+G+ ++ R + G VAI+ + S + + ++ L H ++V
Sbjct: 24 GKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIV----KL 79
Query: 543 FECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLT-------WTQRISAAIGVAKG 595
FE + ++LI EY G + ++ H + + Q +SA
Sbjct: 80 FEVI---ETEKTLYLIMEYASGGEVFDYLVA---HGRMKEKEARSKFRQIVSA------- 126
Query: 596 IQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYS-GSIDP 654
+Q+ H + +LK ++LLD ++ KI+ + N VG + G+ P
Sbjct: 127 VQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGF----SNEFTVGGKLDAFCGA--P 177
Query: 655 TNSA----RGKLEE--KIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTADESA 707
+A +GK + ++D++ G+IL ++ G P + +L + L+
Sbjct: 178 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR----- 232
Query: 708 RRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWHSQS 767
+ ++ C E+L L+ NP +R ++E ++ +D W +
Sbjct: 233 ----IPFYMSTDC--ENLLKRF------LVLNPIKRGTLEQIM---------KDRWINAG 271
Query: 768 SEGSPISPP 776
E + P
Sbjct: 272 HEEDELKPF 280
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 6e-05
Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 11/107 (10%)
Query: 206 RVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVG-----KKLVTMILSKNKFR 260
L L N F + S +L ++DL NN + +L+T+ILS N+ R
Sbjct: 34 TELYLDGNQFTLVPKELSNYKHLTLIDLSNNRI--STLSNQSFSNMTQLLTLILSYNRLR 91
Query: 261 SAIPAEV-SSYYQLQRLDLSSNRFVGPFPQ-ALLSLPSITYLNIADN 305
IP L+ L L N + P+ A L ++++L I N
Sbjct: 92 C-IPPRTFDGLKSLRLLSLHGND-ISVVPEGAFNDLSALSHLAIGAN 136
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 7e-05
Identities = 55/292 (18%), Positives = 113/292 (38%), Gaps = 79/292 (27%)
Query: 486 GEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
G+G+ G +Y + G VAIR + +++ ++ I ++ + ++ ++V+ L
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLD---- 84
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAI--GVAKGIQFLHTG 602
Y ++++ EY+ G+L ++E + Q I AA+ + ++FLH+
Sbjct: 85 SYLVG---DELWVVMEYLAGGSLTDVVTET----CMDEGQ-I-AAVCRECLQALEFLHSN 135
Query: 603 IVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKL 662
V ++K +ILL + K++ + G + I P S R +
Sbjct: 136 ---QVIHRDIKSDNILLGMDGSVKLTDF------------G----FCAQITPEQSKRSTM 176
Query: 663 -----------------EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADE 705
K+DI+ G++ +E+I G P +E
Sbjct: 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP-----------------PYLNE 219
Query: 706 SARRSMVDPAVN-------KACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
+ R++ A N L + + RCL + +R S +++L
Sbjct: 220 NPLRALYLIATNGTPELQNPEKLSAIFRDFLN---RCLEMDVEKRGSAKELL 268
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 9e-05
Identities = 46/293 (15%), Positives = 82/293 (27%), Gaps = 83/293 (28%)
Query: 486 GEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHST--RNFMHHIELISKL-RHRHLVSALGH 541
G GS G++++ R K +G A++ + + K+ +H V
Sbjct: 66 GHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVR---- 121
Query: 542 CFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAH----QSLTWTQRISAAIGVAKGIQ 597
+ + + ++L E +L+ A Q + + +
Sbjct: 122 LEQAWEEGG---ILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDT------LLALA 171
Query: 598 FLHTGIVPGVFSNN-----LKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSI 652
LH S +K +I L K+ + L +
Sbjct: 172 HLH--------SQGLVHLDVKPANIFLGPRGRCKLGDFGL----------------LVEL 207
Query: 653 DPTNSA---------------RGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQL 697
+ +G D++ GL +LE+ L E QL
Sbjct: 208 GTAGAGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGE---GWQQL 264
Query: 698 QAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
R P A L L+ V V L +P R + E +L
Sbjct: 265 -----------RQGYLPPEFTAGLSSELR---SVLVMMLEPDPKLRATAEALL 303
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 44.5 bits (105), Expect = 9e-05
Identities = 20/114 (17%), Positives = 42/114 (36%), Gaps = 14/114 (12%)
Query: 486 GEGSQGQMYRGRL----KNGTFVAIRCLKMKKCHS---TRNFMHHIELISKL-RHRHLVS 537
G G+ GQ+ K T + +K+ + R M ++++ + H ++V+
Sbjct: 31 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 90
Query: 538 ALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIG 591
LG C + + +I E+ G L +++ T+ G
Sbjct: 91 LLGACTK------PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQG 138
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 1e-04
Identities = 27/149 (18%), Positives = 56/149 (37%), Gaps = 32/149 (21%)
Query: 486 GEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
G G+ G ++R K G + + + I ++++L H L++ +
Sbjct: 60 GSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLIN----LHD 115
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWI-SEGHAHQSLTWTQRISAAIGVAK----GIQFL 599
+ D + LI E++ G L I +E + ++ I + G++ +
Sbjct: 116 AFEDKYEM---VLILEFLSGGELFDRIAAEDYKM-----SEA--EVINYMRQACEGLKHM 165
Query: 600 HT-GIV-----PGVF------SNNLKITD 616
H IV P ++++KI D
Sbjct: 166 HEHSIVHLDIKPENIMCETKKASSVKIID 194
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 1e-04
Identities = 31/168 (18%), Positives = 59/168 (35%), Gaps = 34/168 (20%)
Query: 458 ALGLPAYRTFSLEELEEATNNFDTSAF---------MGEGSQGQMYRGRLKN-GTFVAIR 507
AL L + F +L + A +G G+ G++ + VAIR
Sbjct: 107 ALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIR 166
Query: 508 CLKMKKCHSTR--------NFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIF 559
+ +K N IE++ KL H ++ + +FD +++
Sbjct: 167 IISKRKFAIGSAREADPALNVETEIEILKKLNHPCII-----KIKNFFDAEDY---YIVL 218
Query: 560 EYVPNGTLRSWISEGHAHQSLTWTQRISAAI--GVAKGIQFLHT-GIV 604
E + G L + ++ L + + +Q+LH GI+
Sbjct: 219 ELMEGGELFDKVVG---NKRL--KEATCKLYFYQMLLAVQYLHENGII 261
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336 | Back alignment and structure |
|---|
Score = 43.7 bits (102), Expect = 1e-04
Identities = 25/194 (12%), Positives = 53/194 (27%), Gaps = 47/194 (24%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKK--------------------- 513
T +GEG G++++ T VAI+ + ++
Sbjct: 18 PTEKLQRCEKIGEGVFGEVFQTIAD-HTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIII 76
Query: 514 ----CHSTRNFMHHIELISKLRHRHLV-----SALGHCFECY----------FDDSSVSR 554
+ + E L H V L ++ Y D +
Sbjct: 77 SKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQ 136
Query: 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKI 614
+F++ E+ G E + + S + + +L
Sbjct: 137 LFIVLEFEFGGIDL----EQMRTKLSSLATAKSILHQLTASLAVAEA--SLRFEHRDLHW 190
Query: 615 TDILLDQNLVAKIS 628
++LL + + K+
Sbjct: 191 GNVLLKKTSLKKLH 204
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 2e-04
Identities = 34/300 (11%), Positives = 83/300 (27%), Gaps = 61/300 (20%)
Query: 486 GEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHS---TRNFMHHIELISKLRHRHLVSALGH 541
G Q ++ VA+ + + + + +S++ +
Sbjct: 40 GGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARV--- 96
Query: 542 CFECYFD-DSSVSRIFLIFEYVPNGTLRSWISEG-HAHQSLTWTQRISAAIGVAKGIQFL 599
D + + ++ E++ G+L+ ++ Q ++AA A
Sbjct: 97 -----LDVVHTRAGGLVVAEWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRAGVA 151
Query: 600 HTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSAR 659
+ P ++++ G V+ + P + +
Sbjct: 152 LSIDHPS----RVRVSI-------------------------DGDVVLAYPATMPDANPQ 182
Query: 660 GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKA 719
DI G L ++V R V + A+ ++PA
Sbjct: 183 D------DIRGIGASLYALLVNRWPLPEAGVR------SGLAPAERDTAGQPIEPADIDR 230
Query: 720 CLDESLKTMMEVCVRCLLKNPAERPS--VEDVLWNLQFAAQVQDAWHSQSSEGSPISPPR 777
+ + V R + + R + + +++ A + E + PR
Sbjct: 231 DIPFQIS---AVAARSVQGDGGIRSASTLLNLMQQATAVADRTEV-LGPIDEAPVSAAPR 286
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 2e-04
Identities = 32/146 (21%), Positives = 62/146 (42%), Gaps = 19/146 (13%)
Query: 486 GEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
GEGS G + R +G VA++ + ++K + + ++ +H ++V
Sbjct: 54 GEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYK---- 109
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAI--GVAKGIQFLHTG 602
Y ++++ E++ G L +S+ L Q I A + V + + +LH
Sbjct: 110 SYLVG---EELWVLMEFLQGGALTDIVSQV----RLNEEQ-I-ATVCEAVLQALAYLHA- 159
Query: 603 IVPGVFSNNLKITDILLDQNLVAKIS 628
GV ++K ILL + K+S
Sbjct: 160 --QGVIHRDIKSDSILLTLDGRVKLS 183
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 3e-04
Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 31/154 (20%)
Query: 486 GEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTRNFMH---HIELISKLRHRHLVSALGH 541
G G+ G++ G G VA++ L +K S I+ + RH H++
Sbjct: 20 GVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHII----K 75
Query: 542 CFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLT-------WTQRISAAIGVAK 594
++ S+ + F++ EYV G L +I + H + + Q +SA
Sbjct: 76 LYQVI---STPTDFFMVMEYVSGGELFDYICK---HGRVEEMEARRLFQQILSA------ 123
Query: 595 GIQFLHTGIVPGVFSNNLKITDILLDQNLVAKIS 628
+ + H V +LK ++LLD ++ AKI+
Sbjct: 124 -VDYCHRH---MVVHRDLKPENVLLDAHMNAKIA 153
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 4e-04
Identities = 25/125 (20%), Positives = 60/125 (48%), Gaps = 18/125 (14%)
Query: 485 MGEGSQGQMYRGRLKN-GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCF 543
+G G+ +++ + + G A++C+K + + I ++ K++H ++V+
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVT-----L 71
Query: 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISE-GHAHQSLTWTQRISAAI--GVAKGIQFLH 600
E ++ + + +L+ + V G L I E G +T++ ++ + V +++LH
Sbjct: 72 EDIYEST--THYYLVMQLVSGGELFDRILERGV------YTEKDASLVIQQVLSAVKYLH 123
Query: 601 T-GIV 604
GIV
Sbjct: 124 ENGIV 128
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 5e-04
Identities = 44/135 (32%), Positives = 54/135 (40%), Gaps = 11/135 (8%)
Query: 108 DLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENML 167
L L + L +G L+SL L + N L + LTSL L L N L
Sbjct: 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQL 88
Query: 168 AG---RVPDWLGSLPILAVLSLRNNMFNGTLPD-SFSYLENLRVLALSNNHFYGEVPD-- 221
V D L L L+L N +LPD F L L+ L L N VPD
Sbjct: 89 QSLPNGVFD---KLTQLKELALNTNQLQ-SLPDGVFDKLTQLKDLRLYQNQLKS-VPDGV 143
Query: 222 FSGLTYLQVLDLENN 236
F LT LQ + L +N
Sbjct: 144 FDRLTSLQYIWLHDN 158
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 5e-04
Identities = 57/357 (15%), Positives = 109/357 (30%), Gaps = 96/357 (26%)
Query: 469 LEELEEATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRN--FMHHIE 525
L++L E +G G+ G + + K +G +A++ ++ + M
Sbjct: 24 LKDLGE----------IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDV 73
Query: 526 LISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQR 585
++ ++V + F + + E + + + + ++ +
Sbjct: 74 VMRSSDCPYIV----QFYGALFREGDCW---ICMELM-STSFDKFYKYVYSVLDDVIPEE 125
Query: 586 ISAAI--GVAKGIQFLHTGIVPGVFSNNLKI-------TDILLDQNLVAKIS----SYNL 632
I I K + L NLKI ++ILLD++ K+ S L
Sbjct: 126 ILGKITLATVKALNHLK---------ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQL 176
Query: 633 PLLAENAEKVGHVIPYSGSIDPTNSA---------RGKLEEKIDIYDF-------GLILL 676
SI T A R YD G+ L
Sbjct: 177 ----------------VDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLY 220
Query: 677 EIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCL 736
E+ GR + + + +QL VV D + S + CL
Sbjct: 221 ELATGRF--PYPKWNSVFDQLTQVVKGD-----PPQLSNSEEREFSPSFINFVN---LCL 270
Query: 737 LKNPAERPSVEDVL----------WNLQFAAQVQDAW-HSQSSEGSPISPPRPSRQH 782
K+ ++RP +++L ++ A V ++ SP+ H
Sbjct: 271 TKDESKRPKYKELLKHPFILMYEERAVEVACYVCKILDQMPATPSSPMYVDHHHHHH 327
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 6e-04
Identities = 55/292 (18%), Positives = 110/292 (37%), Gaps = 63/292 (21%)
Query: 486 GEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHH-------------IELISKLR 531
G G+ G++ + K + AI+ +K + R + I L+ L
Sbjct: 45 GSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLD 104
Query: 532 HRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI-SEGHAHQSLTWTQRISAAI 590
H +++ F+ + D +L+ E+ G L I + + + +A I
Sbjct: 105 HPNII----KLFDVFEDKKYF---YLVTEFYEGGELFEQIINRHK------FDECDAANI 151
Query: 591 G--VAKGIQFLHT-GIVPGVFSNNLKITDILL---DQNLVAKISSYNLPLLAENAEKVGH 644
+ GI +LH IV ++K +ILL + L KI + L K+
Sbjct: 152 MKQILSGICYLHKHNIVHR----DIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRD 207
Query: 645 VIPYSGSIDPTNSA----RGKLEEKIDIYDFGLILLEIIVG-RPLKSRKEVDLLKNQLQA 699
+ G+ A + K EK D++ G+I+ ++ G P + + D++K +
Sbjct: 208 RL---GT--AYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKG 262
Query: 700 VVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLL-KNPAERPSVEDVL 750
D + +++ D A ++ +L + +R + E+ L
Sbjct: 263 KYYFDFNDWKNISDEAKE--------------LIKLMLTYDYNKRCTAEEAL 300
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 7e-04
Identities = 68/314 (21%), Positives = 122/314 (38%), Gaps = 61/314 (19%)
Query: 486 GEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHS--TRNFMHHIELISKLRHRHLVSALGHC 542
G+GS G++ + + + A++ + + T + +EL+ KL H +++
Sbjct: 31 GKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIM----KL 86
Query: 543 FECYFDDSSVSRIFLIFEYVPNGTLRSWI-SEGHAHQSLTWTQRISAAIG--VAKGIQFL 599
FE D SS +++ E G L I +++ +A I V GI ++
Sbjct: 87 FEILEDSSSF---YIVGELYTGGELFDEIIKRKR------FSEHDAARIIKQVFSGITYM 137
Query: 600 HT-GIVPGVFSNNLKITDILL---DQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPT 655
H IV +LK +ILL +++ KI + L + K+ I G+
Sbjct: 138 HKHNIV----HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI---GT--AY 188
Query: 656 NSA----RGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTADESARRS 710
A RG +EK D++ G+IL ++ G P + E D+LK D R+
Sbjct: 189 YIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRT 248
Query: 711 MVDPAVNKACLDESLKTMMEVCVRCLL-KNPAERPSVEDVLWNLQFAAQVQDAWHSQSSE 769
+ D A + +R +L +P+ R + L + W + S
Sbjct: 249 ISDDAKD--------------LIRKMLTFHPSLRITATQCL---------EHPWIQKYSS 285
Query: 770 GSPISPPRPSRQHL 783
+P PS +
Sbjct: 286 ETPTISDLPSLESA 299
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 8e-04
Identities = 23/107 (21%), Positives = 49/107 (45%), Gaps = 16/107 (14%)
Query: 524 IELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEG--HAHQSLT 581
I ++ KL H ++V E DD + ++++FE V G + + Q+
Sbjct: 87 IAILKKLDHPNVV----KLVEVL-DDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARF 141
Query: 582 WTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKIS 628
+ Q + KGI++LH + ++K +++L+ ++ KI+
Sbjct: 142 YFQDL------IKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIA 179
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 786 | |||
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 100.0 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 100.0 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 100.0 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 100.0 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 100.0 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 100.0 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 100.0 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 100.0 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 100.0 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 100.0 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 100.0 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 100.0 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 100.0 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 100.0 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 100.0 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 100.0 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 100.0 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 100.0 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 100.0 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 100.0 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 100.0 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 100.0 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 100.0 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 100.0 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 99.97 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 99.97 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 99.97 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 99.97 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 99.97 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 99.97 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 99.97 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 99.97 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 99.96 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 99.96 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 99.96 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 99.96 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 99.96 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 99.96 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 99.96 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 99.96 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 99.96 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 99.96 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 99.96 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 99.96 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 99.96 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 99.96 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.96 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 99.96 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.96 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 99.96 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 99.96 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.96 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.96 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.96 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 99.96 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.96 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 99.95 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 99.95 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.95 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.95 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.95 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.95 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 99.95 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 99.94 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.94 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.94 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 99.94 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.94 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 99.94 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 99.94 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 99.94 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 99.94 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.93 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.93 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 99.93 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.93 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 99.93 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.93 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 99.93 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.93 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.92 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.92 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.92 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.92 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.92 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.92 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.91 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.91 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.91 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.9 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.9 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.9 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.9 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.89 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.89 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.89 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.88 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.88 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.88 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.88 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.87 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.87 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.87 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 99.87 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.87 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.86 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.86 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.86 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.86 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.85 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 99.85 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.85 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.84 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.84 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.82 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.82 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.82 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.8 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.8 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.79 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.79 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.79 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.78 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.78 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.78 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.78 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.78 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.77 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.77 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.76 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.76 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.75 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.75 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.74 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.74 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.72 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 99.72 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.72 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.69 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.68 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.66 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 99.65 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.64 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.63 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.62 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.61 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.6 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.6 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.58 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.56 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.56 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.54 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 99.53 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.52 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 99.52 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 99.51 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.49 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.47 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.44 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.43 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 99.41 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 99.38 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 99.3 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.3 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.26 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 99.21 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 99.18 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.12 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 98.98 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 98.87 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 98.79 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 98.78 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 98.75 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 98.73 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.65 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 98.64 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 98.52 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.46 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.36 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 98.34 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.29 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.23 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.18 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 98.1 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 97.93 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 97.87 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 97.77 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 97.68 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 97.68 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 97.46 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 97.45 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 97.28 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 97.25 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 97.24 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 96.96 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 96.59 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 96.49 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 96.46 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 96.3 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 96.26 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 96.25 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 96.15 | |
| 1nw1_A | 429 | Choline kinase (49.2 KD); phospholipid synthesis, | 95.89 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 95.67 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 95.5 | |
| 2qg7_A | 458 | Ethanolamine kinase PV091845; malaria, SGC, struct | 95.05 | |
| 2l2t_A | 44 | Receptor tyrosine-protein kinase ERBB-4; transmemb | 94.85 | |
| 2ks1_B | 44 | Epidermal growth factor receptor; ERBB1, ERBB2, tr | 94.6 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 94.47 | |
| 3c5i_A | 369 | Choline kinase; choline, kinase, malaria, transfer | 94.42 | |
| 3i1a_A | 339 | Spectinomycin phosphotransferase; protein kinase, | 93.93 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 90.76 | |
| 2jwa_A | 44 | Receptor tyrosine-protein kinase ERBB-2; transmemb | 90.63 | |
| 3f2s_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 88.98 | |
| 3mes_A | 424 | Choline kinase; malaria, structural genomics, stru | 88.41 | |
| 3cxl_A | 463 | N-chimerin; SH2, RHO-GAP, structural genomics cons | 87.83 | |
| 2k1k_A | 38 | Ephrin type-A receptor 1; EPHA1, receptor tyrosine | 83.7 | |
| 1iij_A | 35 | ERBB-2 receptor protein-tyrosine kinase; alpha-hel | 80.66 |
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-54 Score=457.44 Aligned_cols=257 Identities=23% Similarity=0.378 Sum_probs=203.7
Q ss_pred cCCCccCccCCCCCceeEEEEec------CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
++|...+.||+|+||+||+|+++ +++.||||+++.......++|.+|+++|++++|||||+++|+|.+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~------ 114 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTE------ 114 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS------
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE------
Confidence 45667789999999999999864 478999999986654556789999999999999999999999975
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCC------------CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCcee
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHA------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDIL 618 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NIL 618 (786)
.+..|||||||++|+|.++|+.... ...++|.+++.|+.|||+||+|||+. +||||||||+|||
T Consensus 115 -~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NIL 190 (329)
T 4aoj_A 115 -GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCL 190 (329)
T ss_dssp -SSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred -CCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEE
Confidence 4568999999999999999975321 24699999999999999999999997 9999999999999
Q ss_pred ecCCCcccccCCCccccccccc---ccccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHH
Q 003926 619 LDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLK 694 (786)
Q Consensus 619 ld~~~~~kl~DfGl~~~~~~~~---~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~ 694 (786)
+|+++.+||+|||+++...... ......++..|||||.+....|+.++|||||||++|||+| |++||.......+.
T Consensus 191 l~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~ 270 (329)
T 4aoj_A 191 VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI 270 (329)
T ss_dssp EETTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHH
T ss_pred ECCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 9999999999999997653322 1233467889999999999999999999999999999999 89999876544433
Q ss_pred HHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 695 NQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
..+.. .. .+..+..++ .++.+++.+||+.||++||||+||+++|+...+
T Consensus 271 ~~i~~---g~--------~~~~p~~~~----~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~ 319 (329)
T 4aoj_A 271 DCITQ---GR--------ELERPRACP----PEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319 (329)
T ss_dssp HHHHH---TC--------CCCCCTTCC----HHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHHHc---CC--------CCCCccccc----HHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence 32221 11 111122333 356788899999999999999999999975543
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-54 Score=452.16 Aligned_cols=254 Identities=21% Similarity=0.387 Sum_probs=206.0
Q ss_pred cCCCccCccCCCCCceeEEEEec------CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
++|...+.||+|+||+||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~------ 86 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVE------ 86 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS------
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEee------
Confidence 45677899999999999999864 478999999986654556789999999999999999999999975
Q ss_pred CCceEEEEEecCCCCChhHHhhcCC----------CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeec
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGH----------AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD 620 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~----------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld 620 (786)
.+..|||||||++|||.++|+... ....++|.+++.|+.|||+||+|||+. +||||||||+|||+|
T Consensus 87 -~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~ 162 (299)
T 4asz_A 87 -GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVG 162 (299)
T ss_dssp -SSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEC
T ss_pred -CCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEEC
Confidence 456899999999999999997532 234699999999999999999999997 999999999999999
Q ss_pred CCCcccccCCCcccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHH
Q 003926 621 QNLVAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQ 696 (786)
Q Consensus 621 ~~~~~kl~DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~ 696 (786)
+++.+||+|||+++....... .....++..|||||.+..+.|+.|+|||||||++|||+| |++||.......+...
T Consensus 163 ~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~ 242 (299)
T 4asz_A 163 ENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIEC 242 (299)
T ss_dssp GGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH
T ss_pred CCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 999999999999976543322 123457788999999999999999999999999999999 8999987655444333
Q ss_pred HHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 697 LQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 697 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
+.. .. . +..+..++ .++.+++.+||+.||++||||+||++.|+-
T Consensus 243 i~~---~~---~-----~~~p~~~~----~~~~~li~~cl~~dP~~RPs~~~i~~~L~~ 286 (299)
T 4asz_A 243 ITQ---GR---V-----LQRPRTCP----QEVYELMLGCWQREPHMRKNIKGIHTLLQN 286 (299)
T ss_dssp HHH---TC---C-----CCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHc---CC---C-----CCCCccch----HHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 221 10 0 11122233 356788899999999999999999887763
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-53 Score=451.62 Aligned_cols=252 Identities=22% Similarity=0.336 Sum_probs=204.5
Q ss_pred CCCccCccCCCCCceeEEEEec------CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
+++..+.||+|+||+||+|++. +++.||||+++.... ...++|.+|+.+|++++|||||+++|+|.+
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~------ 100 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTK------ 100 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECS------
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEE------
Confidence 3455788999999999999863 468999999975543 345789999999999999999999999975
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCC-------------CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCce
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHA-------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDI 617 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NI 617 (786)
.+..+||||||++|||.++|+.... ...++|.+++.|+.|||+||+|||+. +||||||||+||
T Consensus 101 -~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NI 176 (308)
T 4gt4_A 101 -DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNV 176 (308)
T ss_dssp -SSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGE
T ss_pred -CCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccce
Confidence 3568999999999999999975321 23589999999999999999999997 999999999999
Q ss_pred eecCCCcccccCCCccccccccc---ccccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHH
Q 003926 618 LLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLL 693 (786)
Q Consensus 618 Lld~~~~~kl~DfGl~~~~~~~~---~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~ 693 (786)
|+|+++++||+|||+++...... ......++..|||||.+..+.|+.|+|||||||++|||+| |++||.......+
T Consensus 177 Ll~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~ 256 (308)
T 4gt4_A 177 LVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDV 256 (308)
T ss_dssp EECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHH
T ss_pred EECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 99999999999999997654322 2234567889999999999999999999999999999999 8999987655444
Q ss_pred HHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 694 KNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
...+. .. .. +..+..++ ..+.+++.+||+.||++||||+||+++|+
T Consensus 257 ~~~i~----~~--~~-----~~~p~~~~----~~~~~li~~C~~~dP~~RPs~~ei~~~L~ 302 (308)
T 4gt4_A 257 VEMIR----NR--QV-----LPCPDDCP----AWVYALMIECWNEFPSRRPRFKDIHSRLR 302 (308)
T ss_dssp HHHHH----TT--CC-----CCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHH----cC--CC-----CCCcccch----HHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 33221 11 11 11122333 35678889999999999999999999985
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-53 Score=443.86 Aligned_cols=256 Identities=20% Similarity=0.340 Sum_probs=200.2
Q ss_pred hcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
.+++...+.||+|+||+||+|++++ .||||+++..... ..++|.+|+++|++++|||||+++|+|.+ +
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~--------~ 104 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK--------D 104 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS--------S
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC--------C
Confidence 4567778999999999999999763 5999999754432 34679999999999999999999998853 3
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..+||||||++|+|.++|+... ..++|.+++.|+.|||+||+|||+. +||||||||+|||+|+++.+||+|||+|
T Consensus 105 ~~~iVmEy~~gGsL~~~l~~~~--~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla 179 (307)
T 3omv_A 105 NLAIVTQWCEGSSLYKHLHVQE--TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLA 179 (307)
T ss_dssp SCEEEEECCSSCBHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSC
T ss_pred eEEEEEEcCCCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCc
Confidence 4799999999999999997642 4699999999999999999999997 9999999999999999999999999999
Q ss_pred cccccc---cccccccccccccCcccccc---CCCCcccceeehhHHHHHHHhCCCCCCCchh-HHHHHHHHHHHHhccc
Q 003926 634 LLAENA---EKVGHVIPYSGSIDPTNSAR---GKLEEKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVVTADES 706 (786)
Q Consensus 634 ~~~~~~---~~~~~~~~~~~~~aPe~~~~---~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~-~~~~~~~~~~~~~~~~ 706 (786)
+..... .......||..|||||.+.. +.|+.|+|||||||++|||+||++||..... ..+...+. ..
T Consensus 180 ~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~----~~-- 253 (307)
T 3omv_A 180 TVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVG----RG-- 253 (307)
T ss_dssp BC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHH----TT--
T ss_pred eecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHh----cC--
Confidence 765432 22334578999999999853 4599999999999999999999999976432 22222111 11
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
...+. -+.....++ ..+.+++.+||+.||++||||.||+++++..+
T Consensus 254 ~~~p~-~~~~~~~~~----~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~ 299 (307)
T 3omv_A 254 YASPD-LSKLYKNCP----KAMKRLVADCVKKVKEERPLFPQILSSIELLQ 299 (307)
T ss_dssp CCCCC-STTSCTTSC----HHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHH
T ss_pred CCCCC-cccccccch----HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 00000 011222233 45678889999999999999999999997553
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-52 Score=442.52 Aligned_cols=254 Identities=17% Similarity=0.338 Sum_probs=212.3
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
..|+..+.||+|+||+||+|+.+ +|+.||||+++.......+.+.+|+++|++++|||||++++++.+ .+..
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~-------~~~~ 146 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-------GDEL 146 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEE-------TTEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-------CCEE
Confidence 45888899999999999999965 799999999987766667789999999999999999999999876 4679
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
|||||||++|+|.+++.+. .+++.+...++.|++.||+|||+. +||||||||+|||++.++.+||+|||+++.
T Consensus 147 ~ivmEy~~gg~L~~~l~~~----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~ 219 (346)
T 4fih_A 147 WVVMEFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQ 219 (346)
T ss_dssp EEEECCCTTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEeCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCcee
Confidence 9999999999999999752 589999999999999999999998 999999999999999999999999999976
Q ss_pred cccc-cccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccc
Q 003926 636 AENA-EKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDP 714 (786)
Q Consensus 636 ~~~~-~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 714 (786)
.... ......+||..|||||.+....|+.++||||+||++|||++|++||...........+.. .. .+
T Consensus 220 ~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~---~~--------~~ 288 (346)
T 4fih_A 220 VSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD---NL--------PP 288 (346)
T ss_dssp CCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH---SS--------CC
T ss_pred cCCCCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHc---CC--------CC
Confidence 5433 334566899999999999888999999999999999999999999977654433322211 11 01
Q ss_pred cccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 715 AVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 715 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
... .......++.+++.+||++||++|||+.|+++|+||.+
T Consensus 289 ~~~--~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~ 329 (346)
T 4fih_A 289 RLK--NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK 329 (346)
T ss_dssp CCS--CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGG
T ss_pred CCC--ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcC
Confidence 000 01112235678888999999999999999999998764
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-52 Score=443.19 Aligned_cols=257 Identities=15% Similarity=0.269 Sum_probs=206.6
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
++|+..+.||+|+||+||+|+. .+|+.||||+++..... ..+.|.+|+++|++++|||||++++++.+ .+
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~-------~~ 96 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEE-------NG 96 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-------TT
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEE-------CC
Confidence 5788999999999999999996 46999999999765432 24679999999999999999999999875 46
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..|||||||++|+|.++|...+ ...+++.+...++.|++.||+|||+. +||||||||+|||++.++.+||+|||++
T Consensus 97 ~~yiVmEy~~gg~L~~~i~~~~-~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla 172 (350)
T 4b9d_A 97 SLYIVMDYCEGGDLFKRINAQK-GVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIA 172 (350)
T ss_dssp EEEEEEECCTTCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEE
T ss_pred EEEEEEeCCCCCcHHHHHHHcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccc
Confidence 7999999999999999997532 34578999999999999999999998 9999999999999999999999999999
Q ss_pred ccccccc-ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 634 LLAENAE-KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 634 ~~~~~~~-~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
+...... .....+||..|||||.+.+..|+.++||||+||++|||+||++||.......+...+ .... .
T Consensus 173 ~~~~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i---~~~~---~---- 242 (350)
T 4b9d_A 173 RVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKI---ISGS---F---- 242 (350)
T ss_dssp SCCCHHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH---HHTC---C----
T ss_pred eeecCCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH---HcCC---C----
Confidence 7664432 234457899999999999889999999999999999999999999876544333222 1111 0
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQV 759 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~ 759 (786)
+.....+ ..++.+++.+||++||++|||+.|+++|+|+.+..
T Consensus 243 -~~~~~~~----s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~~ 284 (350)
T 4b9d_A 243 -PPVSLHY----SYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRI 284 (350)
T ss_dssp -CCCCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHTTG
T ss_pred -CCCCccC----CHHHHHHHHHHccCChhHCcCHHHHhcCHHhhcCC
Confidence 1111112 23566888899999999999999999999997643
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-51 Score=427.92 Aligned_cols=255 Identities=23% Similarity=0.336 Sum_probs=200.5
Q ss_pred CccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEE
Q 003926 480 DTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (786)
Q Consensus 480 ~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~ 556 (786)
+..+.||+|+||+||+|+.. ++..||||++...... ..+.|.+|+++|++++|||||++++++.... ...+.+|
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~---~~~~~~~ 105 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV---KGKKCIV 105 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEE---TTEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeecc---CCCcEEE
Confidence 34567999999999999965 6899999999765432 2467999999999999999999999886421 1234689
Q ss_pred EEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC-CCcccccCCCcccc
Q 003926 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ-NLVAKISSYNLPLL 635 (786)
Q Consensus 557 LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~-~~~~kl~DfGl~~~ 635 (786)
||||||++|+|.+++.+. ..+++.....++.|++.||+|||+. .++||||||||+|||++. ++.+||+|||+|+.
T Consensus 106 lvmEy~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~ 181 (290)
T 3fpq_A 106 LVTELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp EEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EEEeCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEe
Confidence 999999999999999763 3689999999999999999999986 234999999999999984 79999999999976
Q ss_pred cccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCch-hHHHHHHHHHHHHhccccccccccc
Q 003926 636 AENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVVTADESARRSMVDP 714 (786)
Q Consensus 636 ~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~ 714 (786)
.... .....+||+.|||||.+. ++|+.++|||||||++|||+||++||.... ...+...+ ... .. .+
T Consensus 182 ~~~~-~~~~~~GTp~YmAPE~~~-~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i----~~~--~~----~~ 249 (290)
T 3fpq_A 182 KRAS-FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRV----TSG--VK----PA 249 (290)
T ss_dssp CCTT-SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHH----TTT--CC----CG
T ss_pred CCCC-ccCCcccCccccCHHHcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHH----HcC--CC----CC
Confidence 5432 334567899999999875 579999999999999999999999996532 22222211 111 00 11
Q ss_pred cccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 715 AVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 715 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.....+. .++.+++.+||++||++|||+.|+++|+||.+
T Consensus 250 ~~~~~~~----~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~ 288 (290)
T 3fpq_A 250 SFDKVAI----PEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288 (290)
T ss_dssp GGGGCCC----HHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred CCCccCC----HHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence 1111122 24667888999999999999999999998754
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-50 Score=443.29 Aligned_cols=255 Identities=17% Similarity=0.336 Sum_probs=212.5
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
.+.|+..+.||+|+||+||+|+.+ +|+.||||++........+.+.+|+++|++++|||||++++++.. .+.
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~-------~~~ 222 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-------GDE 222 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEE-------TTE
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEE-------CCE
Confidence 356888999999999999999965 699999999987766667789999999999999999999999875 467
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
+|||||||++|+|.+++... .+++.+...++.|++.||+|||+. +||||||||+|||++.++.+||+|||+++
T Consensus 223 ~~iVmEy~~gG~L~~~i~~~----~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~ 295 (423)
T 4fie_A 223 LWVVMEFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCA 295 (423)
T ss_dssp EEEEEECCTTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCE
T ss_pred EEEEEeCCCCCcHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccce
Confidence 99999999999999999753 589999999999999999999998 99999999999999999999999999997
Q ss_pred ccccc-cccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccccc
Q 003926 635 LAENA-EKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVD 713 (786)
Q Consensus 635 ~~~~~-~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 713 (786)
..... ......+||..|||||.+....|+.++|||||||++|||++|++||...........+.. ...
T Consensus 296 ~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~---~~~-------- 364 (423)
T 4fie_A 296 QVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD---NLP-------- 364 (423)
T ss_dssp ECCSSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH---SCC--------
T ss_pred ECCCCCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHc---CCC--------
Confidence 65432 334566799999999999888999999999999999999999999977654433322211 110
Q ss_pred ccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 714 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
+... ........+.+++.+||++||++|||+.|+++|+||.+
T Consensus 365 ~~~~--~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~ 406 (423)
T 4fie_A 365 PRLK--NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK 406 (423)
T ss_dssp CCCS--CTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGG
T ss_pred CCCc--ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcC
Confidence 0000 00111235668888999999999999999999998764
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-50 Score=418.30 Aligned_cols=252 Identities=18% Similarity=0.284 Sum_probs=195.1
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|+..+.||+|+||+||+|+. .+|+.||||+++.... ...+.|.+|+++|++++|||||++++++.+ .
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~-------~ 85 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKS-------K 85 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEEC-------S
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE-------C
Confidence 5799999999999999999995 4799999999975432 335679999999999999999999998765 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..|+||||| +|+|.+++.+. ..+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+
T Consensus 86 ~~~~ivmEy~-~g~L~~~l~~~---~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGl 158 (275)
T 3hyh_A 86 DEIIMVIEYA-GNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGL 158 (275)
T ss_dssp SEEEEEEECC-CEEHHHHHHHS---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSC
T ss_pred CEEEEEEeCC-CCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCC
Confidence 6799999999 68999999763 3699999999999999999999998 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCccccccCCC-CcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~-t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
|+............||..|+|||.+.+..| +.++||||+||++|||+||++||.......+...+.. ..
T Consensus 159 a~~~~~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~---~~------- 228 (275)
T 3hyh_A 159 SNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISN---GV------- 228 (275)
T ss_dssp C---------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---TC-------
T ss_pred CeecCCCCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc---CC-------
Confidence 977655555556789999999999887765 5799999999999999999999987655443332221 11
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
+..+... ..++.+++.+||++||++|||+.|+++|+||...
T Consensus 229 --~~~p~~~----s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~~ 269 (275)
T 3hyh_A 229 --YTLPKFL----SPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVD 269 (275)
T ss_dssp --CCCCTTS----CHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHTT
T ss_pred --CCCCCCC----CHHHHHHHHHHccCChhHCcCHHHHHcCcccccC
Confidence 0111111 2345678889999999999999999999998643
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-51 Score=438.27 Aligned_cols=265 Identities=20% Similarity=0.327 Sum_probs=211.4
Q ss_pred CHHHHHHHhcCCCccCccCCCCCceeEEEEecC------CcEEEEEEecccCCC-ChHHHHHHHHHHhcCCC-CCcceee
Q 003926 468 SLEELEEATNNFDTSAFMGEGSQGQMYRGRLKN------GTFVAIRCLKMKKCH-STRNFMHHIELISKLRH-RHLVSAL 539 (786)
Q Consensus 468 ~~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~~------g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H-~NIv~l~ 539 (786)
..++++...++|+..+.||+|+||+||+|++.. ++.||||+++..... ..++|.+|+++|++++| ||||+++
T Consensus 55 ~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~ 134 (353)
T 4ase_A 55 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 134 (353)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEE
Confidence 445667777889999999999999999998642 468999999765432 34679999999999965 8999999
Q ss_pred eeeeeccccCCCCceEEEEEecCCCCChhHHhhcCC-------------CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCC
Q 003926 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGH-------------AHQSLTWTQRISAAIGVAKGIQFLHTGIVPG 606 (786)
Q Consensus 540 g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~-------------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ 606 (786)
|+|.+. .+..+||||||++|+|.++|+... ....++|.+++.++.|||+||+|||+. +
T Consensus 135 g~~~~~------~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~ 205 (353)
T 4ase_A 135 GACTKP------GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---K 205 (353)
T ss_dssp EEECCT------TSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred EEEEec------CCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---C
Confidence 998641 345899999999999999997532 124589999999999999999999997 9
Q ss_pred ccccCCCCCceeecCCCcccccCCCccccccccc---ccccccccccccCccccccCCCCcccceeehhHHHHHHHh-CC
Q 003926 607 VFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GR 682 (786)
Q Consensus 607 ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~---~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~ 682 (786)
||||||||+|||+++++.+||+|||+|+...... ......++..|||||.+..+.|+.|+|||||||++|||+| |+
T Consensus 206 iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~ 285 (353)
T 4ase_A 206 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA 285 (353)
T ss_dssp CCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSC
T ss_pred eecCccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCC
Confidence 9999999999999999999999999997653322 2234467788999999999999999999999999999998 99
Q ss_pred CCCCCchh-HHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 683 PLKSRKEV-DLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 683 ~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
+||..... +.+...+.. .. .+..+..++ .++.+++.+||+.||++||||.||++||...
T Consensus 286 ~Pf~~~~~~~~~~~~i~~----g~-------~~~~p~~~~----~~~~~li~~c~~~dP~~RPt~~eil~~L~~l 345 (353)
T 4ase_A 286 SPYPGVKIDEEFCRRLKE----GT-------RMRAPDYTT----PEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 345 (353)
T ss_dssp CSSTTCCCSHHHHHHHHH----TC-------CCCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHc----CC-------CCCCCccCC----HHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 99976442 222222211 10 111122233 3567888899999999999999999998643
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-50 Score=427.15 Aligned_cols=263 Identities=21% Similarity=0.334 Sum_probs=197.2
Q ss_pred CCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHH--HHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFM--HHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~--~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
+|...+.||+|+||+||+|++ +|+.||||+++... .+++. +|+..+.+++|||||+++|+|.+.. .....+
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~---~~~~~~ 76 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDN---GTWTQL 76 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC---SSSEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecC---CCceEE
Confidence 455678999999999999998 48999999997543 33444 4555667899999999999997621 123468
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCC-----CCCccccCCCCCceeecCCCcccccCC
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI-----VPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~-----~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
|||||||++|+|.++|+.. .++|..+++++.|+|+||+|||+.+ .++||||||||+|||+|.++++||+||
T Consensus 77 ~lV~Ey~~~gsL~~~l~~~----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DF 152 (303)
T 3hmm_A 77 WLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp EEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCC
T ss_pred EEEecCCCCCcHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeC
Confidence 9999999999999999863 5899999999999999999999862 468999999999999999999999999
Q ss_pred Ccccccccccc-----cccccccccccCccccccC------CCCcccceeehhHHHHHHHhCCCCCCCchhH--------
Q 003926 631 NLPLLAENAEK-----VGHVIPYSGSIDPTNSARG------KLEEKIDIYDFGLILLEIIVGRPLKSRKEVD-------- 691 (786)
Q Consensus 631 Gl~~~~~~~~~-----~~~~~~~~~~~aPe~~~~~------~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~-------- 691 (786)
|+++....... .....||..|||||.+.+. .|+.|+|||||||++|||+||++|+......
T Consensus 153 Gla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~ 232 (303)
T 3hmm_A 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 232 (303)
T ss_dssp TTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTS
T ss_pred CCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcc
Confidence 99976543322 1234688999999988653 3678999999999999999998776432110
Q ss_pred ---HHHHHHHHHHHhccccccccccccccccC-cHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 692 ---LLKNQLQAVVTADESARRSMVDPAVNKAC-LDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 692 ---~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.....+..... ....+|.++... ..+....+.+++.+||+.||++||||.||+++|....
T Consensus 233 ~~~~~~~~~~~~~~------~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~ 296 (303)
T 3hmm_A 233 PSDPSVEEMRKVVC------EQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296 (303)
T ss_dssp CSSCCHHHHHHHHT------TSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHH
T ss_pred cccchHHHHHHHHh------cccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence 00011111111 111223332221 2345667889999999999999999999999987443
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-50 Score=428.65 Aligned_cols=251 Identities=16% Similarity=0.212 Sum_probs=201.3
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
+.|...+.||+|+||+||+|+.+ +|+.||||+++.... +.+|+++|++++|||||++++++.+ .+..
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~-------~~~~ 125 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVRE-------GPWV 125 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEE-------TTEE
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEE-------CCEE
Confidence 45777889999999999999964 699999999976432 2479999999999999999999875 4578
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC-cccccCCCccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL-VAKISSYNLPL 634 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~-~~kl~DfGl~~ 634 (786)
|||||||++|+|.++|++. ..+++.....++.|++.||+|||+. +||||||||+|||++.++ .+||+|||+++
T Consensus 126 ~ivmEy~~gg~L~~~l~~~---~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~ 199 (336)
T 4g3f_A 126 NIFMELLEGGSLGQLIKQM---GCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHAL 199 (336)
T ss_dssp EEEECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCE
T ss_pred EEEEeccCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCe
Confidence 9999999999999999763 3699999999999999999999998 999999999999999987 69999999997
Q ss_pred cccccc------ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccc
Q 003926 635 LAENAE------KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESAR 708 (786)
Q Consensus 635 ~~~~~~------~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (786)
...... .....+||..|||||.+.+..|+.++|||||||++|||+||++||.......+...+. .... ..
T Consensus 200 ~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~---~~~~-~~ 275 (336)
T 4g3f_A 200 CLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIA---SEPP-PI 275 (336)
T ss_dssp EC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHH---HSCC-GG
T ss_pred EccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHH---cCCC-Cc
Confidence 654321 1123468999999999998899999999999999999999999997654332222211 1110 00
Q ss_pred cccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 709 RSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 709 ~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
+.++..+ ...+.+++.+||++||++|||+.|+++++....+
T Consensus 276 -----~~~~~~~----s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~ 316 (336)
T 4g3f_A 276 -----REIPPSC----APLTAQAIQEGLRKEPVHRASAMELRRKVGKALQ 316 (336)
T ss_dssp -----GGSCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -----hhcCccC----CHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence 1111122 2356678889999999999999999999976543
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-50 Score=423.31 Aligned_cols=249 Identities=16% Similarity=0.262 Sum_probs=205.9
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|+..+.||+|+||+||+|+. .+|+.||||++.... ....+.+.+|+++|++++|||||++++++.+ .
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~-------~ 104 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQD-------D 104 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-------S
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-------C
Confidence 5689999999999999999995 479999999997542 3446789999999999999999999998765 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..|||||||++|+|.++|.+. ..+++.....++.|++.||+|||+. +||||||||+|||++.++.+||+|||+
T Consensus 105 ~~~yivmEy~~gG~L~~~i~~~---~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGl 178 (311)
T 4aw0_A 105 EKLYFGLSYAKNGELLKYIRKI---GSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGT 178 (311)
T ss_dssp SEEEEEECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCC
Confidence 6799999999999999999763 3589999999999999999999998 999999999999999999999999999
Q ss_pred ccccccc---cccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 633 PLLAENA---EKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 633 ~~~~~~~---~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
|+..... ......+||+.|||||.+.+..|+.++||||+||++|||+||++||...+...+...+. ...
T Consensus 179 a~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~---~~~----- 250 (311)
T 4aw0_A 179 AKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKII---KLE----- 250 (311)
T ss_dssp CEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---HTC-----
T ss_pred ceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---cCC-----
Confidence 9765422 22345679999999999998899999999999999999999999998765544433222 111
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
...+... ..++.+++.+||++||++|||+.|++.+.|
T Consensus 251 ----~~~p~~~----s~~~~dli~~lL~~dp~~R~t~~e~~~~~~ 287 (311)
T 4aw0_A 251 ----YDFPEKF----FPKARDLVEKLLVLDATKRLGCEEMEGYGP 287 (311)
T ss_dssp ----CCCCTTC----CHHHHHHHHHHSCSSGGGSTTSGGGTCHHH
T ss_pred ----CCCCccc----CHHHHHHHHHHccCCHhHCcChHHHcCCHH
Confidence 0111111 234668888999999999999998654444
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-50 Score=422.90 Aligned_cols=253 Identities=18% Similarity=0.252 Sum_probs=201.9
Q ss_pred cCCCccCccCCCCCceeEEEEec----CCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK----NGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
++|+..+.||+|+||+||+|+.. +++.||||+++.... .....+.+|+++|++++|||||++++++.+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~------ 97 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQT------ 97 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEE------
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE------
Confidence 46889999999999999999852 478999999975432 234568899999999999999999999875
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
.+..|+|||||++|+|.++|.+. ..+++.+...++.|++.||+|||+. +||||||||+|||++.++.+||+||
T Consensus 98 -~~~~~ivmEy~~gg~L~~~l~~~---~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DF 170 (304)
T 3ubd_A 98 -EGKLYLILDFLRGGDLFTRLSKE---VMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDF 170 (304)
T ss_dssp -TTEEEEEECCCTTCEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESS
T ss_pred -CCEEEEEEEcCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEeccc
Confidence 46799999999999999999763 3689999999999999999999998 9999999999999999999999999
Q ss_pred Cccccccc-ccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 631 NLPLLAEN-AEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 631 Gl~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
|+|+.... .......+||..|||||.+....|+.++||||+||++|||+||++||...+...+...+. ...
T Consensus 171 Gla~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~---~~~----- 242 (304)
T 3ubd_A 171 GLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMIL---KAK----- 242 (304)
T ss_dssp EEEEC-----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---HCC-----
T ss_pred ccceeccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHH---cCC-----
Confidence 99975433 233445678999999999998899999999999999999999999998765544333221 111
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCC-----HHHHHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPS-----VEDVLWNLQFAAQ 758 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt-----~~evl~~l~~~~~ 758 (786)
+..+... ..++.+++.+||++||++||| ++|+++|+||...
T Consensus 243 ----~~~p~~~----s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~i 288 (304)
T 3ubd_A 243 ----LGMPQFL----SPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTI 288 (304)
T ss_dssp ----CCCCTTS----CHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTC
T ss_pred ----CCCCCcC----CHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCC
Confidence 0111112 234668888999999999998 5899999998753
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-48 Score=409.06 Aligned_cols=260 Identities=18% Similarity=0.353 Sum_probs=193.5
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeeecccc-----C
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFD-----D 549 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~-----~ 549 (786)
++|+..+.||+|+||+||+|+.+ +|+.||||+++..... ..+.|.+|+++|++++|||||++++++.+.... .
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 46888999999999999999964 7999999999765432 246799999999999999999999998653210 0
Q ss_pred CCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccC
Q 003926 550 SSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISS 629 (786)
Q Consensus 550 ~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 629 (786)
......|+|||||++|+|.+++.........++...+.++.|++.||+|||+. +||||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEcc
Confidence 11235799999999999999998654334567788889999999999999998 999999999999999999999999
Q ss_pred CCcccccccccc-------------cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHH
Q 003926 630 YNLPLLAENAEK-------------VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQ 696 (786)
Q Consensus 630 fGl~~~~~~~~~-------------~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~ 696 (786)
||+++....... ....+||..|||||.+.+..|+.++|||||||++|||++ ||.... +.. ..
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~-~~~-~~ 236 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM-ERV-RT 236 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH-HHH-HH
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc-HHH-HH
Confidence 999976543211 123468999999999998899999999999999999997 664321 111 11
Q ss_pred HHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 697 LQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 697 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
+...... . . |. ...+......+++.+||++||++|||+.|+++|.||.
T Consensus 237 ~~~~~~~---~----~-p~----~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~ 284 (299)
T 4g31_A 237 LTDVRNL---K----F-PP----LFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFE 284 (299)
T ss_dssp HHHHHTT---C----C-CH----HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGC
T ss_pred HHHHhcC---C----C-CC----CCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhC
Confidence 1111100 0 0 11 1122233456788999999999999999999988864
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-46 Score=410.09 Aligned_cols=274 Identities=15% Similarity=0.223 Sum_probs=207.6
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
++|+..+.||+|+||+||+|+. .+|+.||||+++..... ..+.+.+|+++|++++|||||++++++...... ...+
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~-~~~~ 132 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPY-GEFK 132 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCT-TTCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeeccccc-ccCC
Confidence 4688899999999999999996 47999999999755432 245789999999999999999999987642111 1235
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..|||||||+ |+|.+++... ..+++.....++.|++.||.|||+. +||||||||+|||++.++.+||+|||++
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~~---~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla 205 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHSS---QPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMA 205 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTSS---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEEeCCC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeeccee
Confidence 6899999996 7899999753 4699999999999999999999998 9999999999999999999999999999
Q ss_pred cccccc-----cccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHH-hccc
Q 003926 634 LLAENA-----EKVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVT-ADES 706 (786)
Q Consensus 634 ~~~~~~-----~~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~-~~~~ 706 (786)
+..... ......+||..|+|||.+.+. .|+.++||||+||++|||++|++||.+.+.......+..... ....
T Consensus 206 ~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~ 285 (398)
T 4b99_A 206 RGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPA 285 (398)
T ss_dssp BCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGG
T ss_pred eecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChH
Confidence 754321 123356789999999987664 579999999999999999999999987654333322222211 1111
Q ss_pred ccccc-----------ccccccc---cCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 707 ARRSM-----------VDPAVNK---ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 707 ~~~~~-----------~d~~~~~---~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
..... ..+.... ........++.+++.+||+.||++|||+.|+++|+||.+.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~ 351 (398)
T 4b99_A 286 VIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKY 351 (398)
T ss_dssp GTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTT
T ss_pred HhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcC
Confidence 00000 0000000 0000112456788999999999999999999999998753
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-45 Score=398.03 Aligned_cols=266 Identities=15% Similarity=0.246 Sum_probs=199.8
Q ss_pred HHhcCCCccCccCCCCCceeEEEEec----CCcEEEEEEecccCCCChHHHHHHHHHHhcC-CCCCcceeeeeeeecccc
Q 003926 474 EATNNFDTSAFMGEGSQGQMYRGRLK----NGTFVAIRCLKMKKCHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFD 548 (786)
Q Consensus 474 ~~~~~f~~~~~iG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~ 548 (786)
...+.|+..+.||+|+||+||+|+.+ +++.||||++.... ....+.+|+++|+++ +|||||++++++.+
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~---- 91 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRK---- 91 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEE----
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEE----
Confidence 34578999999999999999999853 47899999986543 456789999999998 69999999998765
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCC-Ccccc
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN-LVAKI 627 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~-~~~kl 627 (786)
.+..|+|||||++|+|.+++. .+++.+...++.|++.||+|||+. +||||||||+|||++.+ +.+||
T Consensus 92 ---~~~~~lvmE~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl 159 (361)
T 4f9c_A 92 ---NDHVVIAMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYAL 159 (361)
T ss_dssp ---TTEEEEEEECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEE
T ss_pred ---CCEEEEEEeCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEE
Confidence 467999999999999999984 388999999999999999999998 99999999999999977 79999
Q ss_pred cCCCccccccccc-----------------------------ccccccccccccCccccccC-CCCcccceeehhHHHHH
Q 003926 628 SSYNLPLLAENAE-----------------------------KVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLE 677 (786)
Q Consensus 628 ~DfGl~~~~~~~~-----------------------------~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~E 677 (786)
+|||+|+...... .....+||+.|+|||.+.+. .|+.++||||+||++||
T Consensus 160 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~e 239 (361)
T 4f9c_A 160 VDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLS 239 (361)
T ss_dssp CCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHH
T ss_pred CcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHH
Confidence 9999996442211 11234688999999988765 58999999999999999
Q ss_pred HHhCCCCCCCch--hHHHHHHHHHHHHhc---------cccc--ccc--------------cc---cccc---------c
Q 003926 678 IIVGRPLKSRKE--VDLLKNQLQAVVTAD---------ESAR--RSM--------------VD---PAVN---------K 718 (786)
Q Consensus 678 lltG~~p~~~~~--~~~~~~~~~~~~~~~---------~~~~--~~~--------------~d---~~~~---------~ 718 (786)
|+||++||.... .+.+........... .... ... .+ |... .
T Consensus 240 ll~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 319 (361)
T 4f9c_A 240 LLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNL 319 (361)
T ss_dssp HHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC--------------------
T ss_pred HHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccc
Confidence 999999985432 222222221110000 0000 000 00 0000 0
Q ss_pred cCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 719 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 719 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
........++.+++.+||+.||++|||++|+++|+||..
T Consensus 320 ~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~ 358 (361)
T 4f9c_A 320 EGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKD 358 (361)
T ss_dssp --CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTT
T ss_pred cccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCC
Confidence 001112345678999999999999999999999999753
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-45 Score=419.66 Aligned_cols=257 Identities=16% Similarity=0.233 Sum_probs=212.9
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
.++|+..+.||+|+||+||+|+.+ +|+.||||++........+.+.+|+++|++++|||||++++++.+ .+.
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~-------~~~ 228 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFED-------DNE 228 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEC-------SSE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEE-------CCE
Confidence 367999999999999999999965 799999999976554456779999999999999999999998865 467
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCC--CcccccCCCc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN--LVAKISSYNL 632 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~--~~~kl~DfGl 632 (786)
+|||||||++|+|.++|.+. ...+++.+...++.|++.||.|||+. +|+||||||+|||++.+ +.+||+|||+
T Consensus 229 ~~iv~E~~~gg~L~~~i~~~--~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~ 303 (573)
T 3uto_A 229 MVMIYEFMSGGELFEKVADE--HNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGL 303 (573)
T ss_dssp EEEEEECCCCCBHHHHHTCT--TSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSS
T ss_pred EEEEEeecCCCcHHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccc
Confidence 99999999999999999753 23689999999999999999999998 99999999999999854 7899999999
Q ss_pred ccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
++...........+||..|+|||.+.+..|+.++||||+||++|||++|++||...........+.. ... . +
T Consensus 304 a~~~~~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~---~~~----~-~ 375 (573)
T 3uto_A 304 TAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKS---CDW----N-M 375 (573)
T ss_dssp CEECCTTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHT---TCC----C-C
T ss_pred eeEccCCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHh---CCC----C-C
Confidence 9877665555667889999999999998999999999999999999999999987655443322211 100 0 1
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
++.... .....+.+++.+||+.||++|||+.|+++|+||.
T Consensus 376 ~~~~~~----~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~ 415 (573)
T 3uto_A 376 DDSAFS----GISEDGKDFIRKLLLADPNTRMTIHQALEHPWLT 415 (573)
T ss_dssp CSGGGT----TSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTS
T ss_pred Cccccc----CCCHHHHHHHHHHccCChhHCcCHHHHhcCcCcC
Confidence 111111 1223566888899999999999999999999865
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=412.65 Aligned_cols=256 Identities=17% Similarity=0.233 Sum_probs=204.6
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHH---HHHHHHhcCCCCCcceeeeeeeecccc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFM---HHIELISKLRHRHLVSALGHCFECYFD 548 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~---~E~~~l~~l~H~NIv~l~g~~~~~~~~ 548 (786)
.++|+..++||+|+||+||+|+.+ +|+.||||++++.. ......+. .++++++.++|||||++++++.+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~---- 263 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT---- 263 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEEC----
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEE----
Confidence 467999999999999999999965 69999999997542 12233333 34677888999999999998765
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCccccc
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKIS 628 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~ 628 (786)
.+.+|+|||||++|+|.++|.+. ..+++.....++.||+.||+|||+. +||||||||+|||+|.++++||+
T Consensus 264 ---~~~lylVmEy~~GGdL~~~l~~~---~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~ 334 (689)
T 3v5w_A 264 ---PDKLSFILDLMNGGDLHYHLSQH---GVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRIS 334 (689)
T ss_dssp ---SSEEEEEECCCCSCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEEC
T ss_pred ---CCEEEEEEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEec
Confidence 46799999999999999999763 3589999999999999999999998 99999999999999999999999
Q ss_pred CCCcccccccccccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccc
Q 003926 629 SYNLPLLAENAEKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESA 707 (786)
Q Consensus 629 DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (786)
|||+|+...... ....+||+.|||||.+.. ..|+.++||||+||++|||++|++||...................
T Consensus 335 DFGlA~~~~~~~-~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~--- 410 (689)
T 3v5w_A 335 DLGLACDFSKKK-PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA--- 410 (689)
T ss_dssp CCTTCEECSSCC-CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCC---
T ss_pred ccceeeecCCCC-CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCC---
Confidence 999997664432 345679999999999865 469999999999999999999999997643322222222221111
Q ss_pred ccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCC-----HHHHHHHHHHHHH
Q 003926 708 RRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPS-----VEDVLWNLQFAAQ 758 (786)
Q Consensus 708 ~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt-----~~evl~~l~~~~~ 758 (786)
...+.. ...++.+++.+||++||++|++ +.||++|+||...
T Consensus 411 ------~~~p~~----~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~i 456 (689)
T 3v5w_A 411 ------VELPDS----FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL 456 (689)
T ss_dssp ------CCCCTT----SCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTC
T ss_pred ------CCCCcc----CCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCC
Confidence 111111 1235668888999999999998 7999999998864
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-44 Score=384.40 Aligned_cols=285 Identities=33% Similarity=0.598 Sum_probs=230.5
Q ss_pred ccCHHHHHHHhcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeec
Q 003926 466 TFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFEC 545 (786)
Q Consensus 466 ~~~~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~ 545 (786)
.+++.++...+++|+..+.||+|+||.||+|+.++|+.||||++........+.|.+|++++++++||||++++++|..
T Consensus 28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~- 106 (321)
T 2qkw_B 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDE- 106 (321)
T ss_dssp --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCC-
T ss_pred eecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC-
Confidence 3455566678899999999999999999999988899999999887655556789999999999999999999999864
Q ss_pred cccCCCCceEEEEEecCCCCChhHHhhcCCC-CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCc
Q 003926 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGHA-HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV 624 (786)
Q Consensus 546 ~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~-~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~ 624 (786)
.+..++||||+++|+|.+++..... ...++|..++.++.|+++||+|||+. +|+||||||+||+++.++.
T Consensus 107 ------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~ 177 (321)
T 2qkw_B 107 ------RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFV 177 (321)
T ss_dssp ------TTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCC
T ss_pred ------CCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCC
Confidence 3568999999999999999975432 23689999999999999999999997 9999999999999999999
Q ss_pred ccccCCCccccccccc---ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhH---HHHHHHH
Q 003926 625 AKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVD---LLKNQLQ 698 (786)
Q Consensus 625 ~kl~DfGl~~~~~~~~---~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~---~~~~~~~ 698 (786)
+||+|||+++...... ......++..|+|||....+.++.++|||||||++|||+||+.||...... ....+..
T Consensus 178 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~ 257 (321)
T 2qkw_B 178 PKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAV 257 (321)
T ss_dssp EEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTH
T ss_pred EEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhh
Confidence 9999999986543211 122334678899999988888999999999999999999999998643221 1222211
Q ss_pred HHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhhhh
Q 003926 699 AVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDA 762 (786)
Q Consensus 699 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~~~ 762 (786)
.. .........+++........+....+.+++.+||+.||++|||+.||+++++.....++.
T Consensus 258 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~~~ 319 (321)
T 2qkw_B 258 ES--HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQES 319 (321)
T ss_dssp HH--HTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSCC
T ss_pred hc--cccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcccC
Confidence 11 112234455566665566677888899999999999999999999999999977665544
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-43 Score=380.10 Aligned_cols=283 Identities=29% Similarity=0.559 Sum_probs=230.9
Q ss_pred ccccCHHHHHHHhcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeee
Q 003926 464 YRTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHC 542 (786)
Q Consensus 464 ~~~~~~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~ 542 (786)
.+.+++.++...+++|+..+.||+|+||.||+|+.++|+.||||++...... ....|.+|++++++++||||++++++|
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence 4578899999999999999999999999999999888999999999865432 334799999999999999999999998
Q ss_pred eeccccCCCCceEEEEEecCCCCChhHHhhcCC-CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC
Q 003926 543 FECYFDDSSVSRIFLIFEYVPNGTLRSWISEGH-AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ 621 (786)
Q Consensus 543 ~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~ 621 (786)
.. .+..++||||+++|+|.+++.... ....++|..+..++.|++.||+|||+.+.++|+||||||+||+++.
T Consensus 97 ~~-------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~ 169 (326)
T 3uim_A 97 MT-------PTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDE 169 (326)
T ss_dssp CC-------SSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECT
T ss_pred ec-------CCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECC
Confidence 65 355799999999999999998643 2345999999999999999999999987779999999999999999
Q ss_pred CCcccccCCCccccccccc--ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCch-----hHHHH
Q 003926 622 NLVAKISSYNLPLLAENAE--KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKE-----VDLLK 694 (786)
Q Consensus 622 ~~~~kl~DfGl~~~~~~~~--~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~-----~~~~~ 694 (786)
++.+||+|||++....... ......++..|+|||.+....++.++|||||||++|||+||++||+... .....
T Consensus 170 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~ 249 (326)
T 3uim_A 170 EFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 249 (326)
T ss_dssp TCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHH
T ss_pred CCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHH
Confidence 9999999999997653222 2233447888999999988889999999999999999999999996321 11122
Q ss_pred HHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 695 NQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
.++... ..........+.........+....+.+++.+||+.||++|||+.||+++|+.
T Consensus 250 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 250 DWVKGL--LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp HHHTTT--TSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred HHHHHH--hhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 222111 11223344555555566677888899999999999999999999999999974
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-43 Score=374.11 Aligned_cols=290 Identities=29% Similarity=0.434 Sum_probs=229.0
Q ss_pred cCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCC--CCCCCCccEEeCC----CCEEEEEeCCCCCCC--CCCCCCcCCc
Q 003926 27 QLQSSQAQTLLRIQGLLNNPAVLSSWNITTEFCN--TEPTSSLTVVCYE----ESITQLHIVGNKRAP--MLPLSFSMDS 98 (786)
Q Consensus 27 ~~~~~~~~~ll~~k~~~~~~~~l~~W~~~~~~C~--w~~~~~~~v~c~~----~~v~~l~l~~~~~~~--~l~~~~~~~~ 98 (786)
.|.++|++||++||+++.+|..+++|+.+++||. |. ||.|.. ++|+.|+++++.+.+ .+|
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~~~~~C~~~w~-----gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~------- 69 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWL-----GVLCDTDTQTYRVNNLDLSGLNLPKPYPIP------- 69 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTTTTCST-----TEEECCSSSCCCEEEEEEECCCCSSCEECC-------
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCCCCCCCcCCCc-----ceEeCCCCCCceEEEEECCCCCccCCcccC-------
Confidence 5999999999999999988878899988889998 87 599964 789999999998876 554
Q ss_pred cccccCCCCCCCEEEccC-CCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCC
Q 003926 99 FVTTLVKLPDLKVLRLVS-LGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGS 177 (786)
Q Consensus 99 ~~~~l~~l~~L~~L~L~~-n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 177 (786)
..+.++++|++|+|++ |.+.+.+|..|+++++|++|+|++|.+++.+|..|.++++|++|+|++|.+++.+|..|..
T Consensus 70 --~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 147 (313)
T 1ogq_A 70 --SSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISS 147 (313)
T ss_dssp --GGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGG
T ss_pred --hhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhc
Confidence 4677899999999995 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCEEEccCCcCcccCCccccCCC-CCCEEEccCCcCCcCCCC-CCCCCcCCEEEcccCCCCCCCCccccchhhhhcc
Q 003926 178 LPILAVLSLRNNMFNGTLPDSFSYLE-NLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILS 255 (786)
Q Consensus 178 l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls 255 (786)
+++|++|+|++|.+++.+|..|..++ +|+.|+|++|++++.+|. +..++ |++|+|++|.++
T Consensus 148 l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~---------------- 210 (313)
T 1ogq_A 148 LPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLE---------------- 210 (313)
T ss_dssp CTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEE----------------
T ss_pred CCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCccc----------------
Confidence 99999999999999999999999998 899999999999987775 66665 888887777665
Q ss_pred CCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccC
Q 003926 256 KNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQL 335 (786)
Q Consensus 256 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~ 335 (786)
+.+|..|..+++|+.|+|++|++++.+|. +..+++|++|+|++|++++.+|..+..+++|+.|+|++|+++|.+
T Consensus 211 -----~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~i 284 (313)
T 1ogq_A 211 -----GDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEI 284 (313)
T ss_dssp -----ECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEEC
T ss_pred -----CcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccC
Confidence 44455555556666666666666554444 555566666666666666666666666666666666666666666
Q ss_pred ChhhhcCCCCcEEEcCCcc
Q 003926 336 PNCLLAGSKNRVVLYARNC 354 (786)
Q Consensus 336 p~~~~~~~~~~~~~~~~N~ 354 (786)
|.. .....+..+.+.+|.
T Consensus 285 p~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 285 PQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp CCS-TTGGGSCGGGTCSSS
T ss_pred CCC-ccccccChHHhcCCC
Confidence 554 344445555555554
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-42 Score=369.10 Aligned_cols=266 Identities=19% Similarity=0.338 Sum_probs=215.5
Q ss_pred cccCHHHHHHHhcC----------CCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCC
Q 003926 465 RTFSLEELEEATNN----------FDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHR 533 (786)
Q Consensus 465 ~~~~~~~l~~~~~~----------f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~ 533 (786)
..++++++..+++. |+..+.||+|+||.||+|+.. +|+.||||++........+.|.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 35778888888765 566778999999999999976 7999999999876666678899999999999999
Q ss_pred CcceeeeeeeeccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCC
Q 003926 534 HLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLK 613 (786)
Q Consensus 534 NIv~l~g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk 613 (786)
|||++++++.. .+..++||||+++|+|.+++.. ..+++..+..++.|+++||+|||+. +|+|||||
T Consensus 103 niv~~~~~~~~-------~~~~~lv~e~~~~~~L~~~l~~----~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlk 168 (321)
T 2c30_A 103 NVVEMYKSYLV-------GEELWVLMEFLQGGALTDIVSQ----VRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIK 168 (321)
T ss_dssp TBCCEEEEEEE-------TTEEEEEECCCCSCBHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCS
T ss_pred CcceEEEEEEE-------CCEEEEEEecCCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCC
Confidence 99999999875 4568999999999999999874 2589999999999999999999997 99999999
Q ss_pred CCceeecCCCcccccCCCcccccccc-cccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHH
Q 003926 614 ITDILLDQNLVAKISSYNLPLLAENA-EKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL 692 (786)
Q Consensus 614 ~~NILld~~~~~kl~DfGl~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~ 692 (786)
|+||+++.++.+||+|||++...... .......++..|+|||......++.++|||||||++|||++|++||.......
T Consensus 169 p~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~ 248 (321)
T 2c30_A 169 SDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQ 248 (321)
T ss_dssp GGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH
T ss_pred HHHEEECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 99999999999999999998655332 22234567888999999988889999999999999999999999997654433
Q ss_pred HHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 693 LKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
....+. ... .+.... .......+.+++.+||+.||++|||+.|+++|+|+.+
T Consensus 249 ~~~~~~---~~~--------~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~ 300 (321)
T 2c30_A 249 AMKRLR---DSP--------PPKLKN--SHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQ 300 (321)
T ss_dssp HHHHHH---HSS--------CCCCTT--GGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGG
T ss_pred HHHHHh---cCC--------CCCcCc--cccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcc
Confidence 222211 111 010000 0111234667888999999999999999999998764
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-42 Score=365.62 Aligned_cols=255 Identities=18% Similarity=0.321 Sum_probs=208.9
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
.++|...+.||+|+||+||+|+. .+|+.||||++........+.+.+|+.++++++|||||++++++.. .+.
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------~~~ 91 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV-------GDE 91 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEE-------TTE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEE-------CCE
Confidence 45688899999999999999995 5799999999987766667889999999999999999999998875 456
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++||||+++|+|.+++.+. .+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 92 ~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~ 164 (297)
T 3fxz_A 92 LWVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCA 164 (297)
T ss_dssp EEEEEECCTTCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEEECCCCCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCce
Confidence 89999999999999999763 589999999999999999999998 99999999999999999999999999986
Q ss_pred cccccc-ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccccc
Q 003926 635 LAENAE-KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVD 713 (786)
Q Consensus 635 ~~~~~~-~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 713 (786)
...... ......++..|+|||.+....++.++|||||||++|||+||+.||...........+. ... ......
T Consensus 165 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~---~~~---~~~~~~ 238 (297)
T 3fxz_A 165 QITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA---TNG---TPELQN 238 (297)
T ss_dssp ECCSTTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH---HHC---SCCCSC
T ss_pred ecCCcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---hCC---CCCCCC
Confidence 554322 2334567888999999988899999999999999999999999997654332221111 111 001111
Q ss_pred ccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 714 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
+ ......+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 239 ~-------~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~ 275 (297)
T 3fxz_A 239 P-------EKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKI 275 (297)
T ss_dssp G-------GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGG
T ss_pred c-------cccCHHHHHHHHHHccCChhHCcCHHHHhhChhhcc
Confidence 1 112235668888999999999999999999988754
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-42 Score=370.10 Aligned_cols=253 Identities=17% Similarity=0.284 Sum_probs=209.0
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.++|...+.||+|+||.||+|+. .+|+.||||++...... ..+.+.+|++++++++||||+++++++.. .
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-------~ 86 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIET-------E 86 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-------S
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-------C
Confidence 45788899999999999999996 57999999999765432 24568899999999999999999999864 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..|+||||+++|+|.+++... ..+++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 87 ~~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~ 160 (328)
T 3fe3_A 87 KTLYLIMEYASGGEVFDYLVAH---GRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGF 160 (328)
T ss_dssp SEEEEEECCCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTC
T ss_pred CEEEEEEECCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccC
Confidence 5789999999999999999753 3589999999999999999999997 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCccccccCCCC-cccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKLE-EKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t-~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
+.............++..|+|||.+....++ .++||||+||++|||++|++||.......+...+.. ..
T Consensus 161 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~---~~------- 230 (328)
T 3fe3_A 161 SNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR---GK------- 230 (328)
T ss_dssp CGGGSSSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---CC-------
T ss_pred ceecCCCCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHh---CC-------
Confidence 9766554445556788899999998877765 799999999999999999999987665444332211 10
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
...+... ...+.+++.+||+.||.+|||+.|+++|+|+..
T Consensus 231 --~~~p~~~----s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~ 270 (328)
T 3fe3_A 231 --YRIPFYM----STDCENLLKRFLVLNPIKRGTLEQIMKDRWINA 270 (328)
T ss_dssp --CCCCTTS----CHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTT
T ss_pred --CCCCCCC----CHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcC
Confidence 0011111 234667888999999999999999999998754
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-41 Score=359.67 Aligned_cols=277 Identities=31% Similarity=0.518 Sum_probs=219.3
Q ss_pred cccCHHHHHHHhcCCCcc------CccCCCCCceeEEEEecCCcEEEEEEecccCC----CChHHHHHHHHHHhcCCCCC
Q 003926 465 RTFSLEELEEATNNFDTS------AFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKC----HSTRNFMHHIELISKLRHRH 534 (786)
Q Consensus 465 ~~~~~~~l~~~~~~f~~~------~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~----~~~~~f~~E~~~l~~l~H~N 534 (786)
..|+++++..++++|+.. +.||+|+||.||+|+. +++.||||++..... ...+.|.+|++++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 568999999999999888 8999999999999987 578999999875421 22467999999999999999
Q ss_pred cceeeeeeeeccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCC
Q 003926 535 LVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKI 614 (786)
Q Consensus 535 Iv~l~g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~ 614 (786)
|+++++++.. .+..++||||+++|+|.+++........++|..+..++.|+++||.|||+. +|+||||||
T Consensus 92 i~~~~~~~~~-------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp 161 (307)
T 2nru_A 92 LVELLGFSSD-------GDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKS 161 (307)
T ss_dssp BCCEEEEECS-------SSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCG
T ss_pred eEEEEEEEec-------CCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCH
Confidence 9999998864 356899999999999999997543345699999999999999999999997 999999999
Q ss_pred CceeecCCCcccccCCCcccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhH
Q 003926 615 TDILLDQNLVAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVD 691 (786)
Q Consensus 615 ~NILld~~~~~kl~DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~ 691 (786)
+||+++.++.+||+|||++........ .....++..|+|||... +.++.++||||||+++|||++|++||......
T Consensus 162 ~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~ 240 (307)
T 2nru_A 162 ANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREP 240 (307)
T ss_dssp GGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHT-TEECTHHHHHHHHHHHHHHHHCCCSBCTTBSS
T ss_pred HHEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhc-CCCCccchhHHHHHHHHHHHHCCCCcccCcch
Confidence 999999999999999999865433211 22345678899999775 46899999999999999999999998754322
Q ss_pred H-HHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 692 L-LKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 692 ~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
. ...+... .........+.+++.. ..........+.+++.+||+.||++|||+.||+++|..
T Consensus 241 ~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~ 303 (307)
T 2nru_A 241 QLLLDIKEE-IEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 303 (307)
T ss_dssp SBTTHHHHH-HHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred HHHHHHHHH-hhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 1 1111111 1111111222233322 22345667788899999999999999999999999974
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-41 Score=369.72 Aligned_cols=256 Identities=16% Similarity=0.243 Sum_probs=208.9
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC------ChHHHHHHHHHHhcCCCCCcceeeeeeeecccc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH------STRNFMHHIELISKLRHRHLVSALGHCFECYFD 548 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~------~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~ 548 (786)
.+.|+..+.||+|+||.||+|+.+ +|+.||||+++..... ..+.+.+|++++++++|||||++++++..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~---- 86 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYEN---- 86 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEEC----
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEe----
Confidence 456888999999999999999965 6999999999765432 24679999999999999999999998864
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC----c
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL----V 624 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~----~ 624 (786)
.+..++||||+++|+|.+++... ..+++.....++.|++.||.|||+. +|+||||||+|||++.++ .
T Consensus 87 ---~~~~~lv~e~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~ 157 (361)
T 2yab_A 87 ---RTDVVLILELVSGGELFDFLAQK---ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPH 157 (361)
T ss_dssp ---SSEEEEEEECCCSCBHHHHHTTC---SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCC
T ss_pred ---CCEEEEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccC
Confidence 45789999999999999999753 3689999999999999999999997 999999999999998877 7
Q ss_pred ccccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhc
Q 003926 625 AKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704 (786)
Q Consensus 625 ~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 704 (786)
+||+|||++.............++..|+|||.+....|+.++|||||||++|||++|++||...........+.. ..
T Consensus 158 vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~---~~ 234 (361)
T 2yab_A 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITA---VS 234 (361)
T ss_dssp EEECCCSSCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHT---TC
T ss_pred EEEEecCCceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh---cC
Confidence 999999999766554444556788899999999888899999999999999999999999976554433222211 10
Q ss_pred cccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 705 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
..+++.... .....+.+++.+||+.||++|||+.|+++|+|+.
T Consensus 235 -----~~~~~~~~~----~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~ 277 (361)
T 2yab_A 235 -----YDFDEEFFS----QTSELAKDFIRKLLVKETRKRLTIQEALRHPWIT 277 (361)
T ss_dssp -----CCCCHHHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTS
T ss_pred -----CCCCchhcc----CCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcC
Confidence 001111111 1123566888899999999999999999999875
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-41 Score=364.38 Aligned_cols=253 Identities=17% Similarity=0.283 Sum_probs=208.1
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEeccc---CCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMK---KCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
.++|+..+.||+|+||+||+|+.+ +|+.||||+++.. .....+.+.+|++++++++||||+++++++..
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~------- 76 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT------- 76 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEEC-------
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEe-------
Confidence 357888999999999999999965 6999999999754 23446779999999999999999999998865
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
.+..|+||||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 77 ~~~~~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG 150 (337)
T 1o6l_A 77 HDRLCFVMEYANGGELFFHLSRE---RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFG 150 (337)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeecc
Confidence 45789999999999999999753 3589999999999999999999997 99999999999999999999999999
Q ss_pred cccccc-cccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 632 LPLLAE-NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 632 l~~~~~-~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
+++... .........++..|+|||.+....++.++|||||||++|||++|++||...+...+...+. ...
T Consensus 151 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~---~~~------ 221 (337)
T 1o6l_A 151 LCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL---MEE------ 221 (337)
T ss_dssp TCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---HCC------
T ss_pred chhhcccCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHH---cCC------
Confidence 986532 2233345567889999999988889999999999999999999999997665443322221 111
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERP-----SVEDVLWNLQFAA 757 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~~l~~~~ 757 (786)
...+... ...+.+++.+||+.||++|| ++.||++|+||..
T Consensus 222 ---~~~p~~~----s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~ 266 (337)
T 1o6l_A 222 ---IRFPRTL----SPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 266 (337)
T ss_dssp ---CCCCTTS----CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred ---CCCCCCC----CHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCC
Confidence 0111111 23466788899999999999 9999999999864
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-41 Score=364.52 Aligned_cols=258 Identities=15% Similarity=0.204 Sum_probs=209.5
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
.++|...+.||+|+||.||+|+.. +|+.||+|.++... .....+.+|++++++++|||||++++++.. .+.
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-------~~~ 75 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFES-------MEE 75 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEE-------TTE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEec-------CCE
Confidence 357888999999999999999965 68999999987542 334668999999999999999999999865 457
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC--CCcccccCCCc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ--NLVAKISSYNL 632 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~--~~~~kl~DfGl 632 (786)
.++|||||++|+|.+++... ...+++.....++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~ 150 (321)
T 1tki_A 76 LVMIFEFISGLDIFERINTS--AFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQ 150 (321)
T ss_dssp EEEEECCCCCCBHHHHHTSS--SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTT
T ss_pred EEEEEEeCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCC
Confidence 89999999999999999753 23689999999999999999999998 9999999999999997 78999999999
Q ss_pred ccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
+.............++..|+|||......++.++|||||||++|||++|++||...........+. .... ..
T Consensus 151 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~---~~~~-----~~ 222 (321)
T 1tki_A 151 ARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIM---NAEY-----TF 222 (321)
T ss_dssp CEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH---HTCC-----CC
T ss_pred CeECCCCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHH---cCCC-----CC
Confidence 976655444445567889999999988888999999999999999999999997655433322221 1110 00
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
++.... .....+.+++.+||+.||++|||+.|+++|+|+.+.
T Consensus 223 ~~~~~~----~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~ 264 (321)
T 1tki_A 223 DEEAFK----EISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK 264 (321)
T ss_dssp CHHHHT----TSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred Chhhhc----cCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhccC
Confidence 111111 112356788899999999999999999999998754
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-41 Score=362.54 Aligned_cols=258 Identities=21% Similarity=0.362 Sum_probs=198.9
Q ss_pred HHHHhcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccC
Q 003926 472 LEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDD 549 (786)
Q Consensus 472 l~~~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~ 549 (786)
+....++|+..+.||+|+||+||+|+. +|+.||||++...... ..++|.+|++++++++|||||++++++..
T Consensus 32 ~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----- 105 (309)
T 3p86_A 32 MDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQ----- 105 (309)
T ss_dssp CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-----
T ss_pred ccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-----
Confidence 334456788899999999999999987 5889999999765432 23579999999999999999999998864
Q ss_pred CCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCC--ccccCCCCCceeecCCCcccc
Q 003926 550 SSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPG--VFSNNLKITDILLDQNLVAKI 627 (786)
Q Consensus 550 ~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~--ivHrdlk~~NILld~~~~~kl 627 (786)
.+..++||||+++|+|.+++........+++..++.++.|+++||+|||+. + |+||||||+||+++.++.+||
T Consensus 106 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL 180 (309)
T 3p86_A 106 --PPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKV 180 (309)
T ss_dssp --TTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEE
T ss_pred --CCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEE
Confidence 345899999999999999998643223489999999999999999999997 6 999999999999999999999
Q ss_pred cCCCccccccccc-ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccc
Q 003926 628 SSYNLPLLAENAE-KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADES 706 (786)
Q Consensus 628 ~DfGl~~~~~~~~-~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (786)
+|||+++...... ......++..|+|||.+....++.++|||||||++|||+||+.||...........+.. ..
T Consensus 181 ~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~---~~-- 255 (309)
T 3p86_A 181 CDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGF---KC-- 255 (309)
T ss_dssp CCCC-----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHH---SC--
T ss_pred CCCCCCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh---cC--
Confidence 9999986543321 22344677889999999888899999999999999999999999987554433222111 00
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
. .......++ ..+.+++.+||+.||++|||+.||++.+.
T Consensus 256 -~----~~~~~~~~~----~~l~~li~~~l~~dP~~Rps~~~ll~~L~ 294 (309)
T 3p86_A 256 -K----RLEIPRNLN----PQVAAIIEGCWTNEPWKRPSFATIMDLLR 294 (309)
T ss_dssp -C----CCCCCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -C----CCCCCccCC----HHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 0 011111222 35678888999999999999999999886
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-41 Score=362.61 Aligned_cols=255 Identities=18% Similarity=0.260 Sum_probs=206.9
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC------ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH------STRNFMHHIELISKLRHRHLVSALGHCFECYFDD 549 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~------~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~ 549 (786)
+.|+..+.||+|+||.||+|+.. +|+.||||+++..... ..+.+.+|++++++++|||||++++++..
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----- 85 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN----- 85 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEe-----
Confidence 45788899999999999999965 6899999999754322 35779999999999999999999998865
Q ss_pred CCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC----cc
Q 003926 550 SSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL----VA 625 (786)
Q Consensus 550 ~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~----~~ 625 (786)
.+..++||||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++ .+
T Consensus 86 --~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~ 157 (326)
T 2y0a_A 86 --KTDVILILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRI 157 (326)
T ss_dssp --SSEEEEEEECCCSCBHHHHHTTS---SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCE
T ss_pred --CCEEEEEEEcCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCE
Confidence 45689999999999999999753 4689999999999999999999997 999999999999999887 79
Q ss_pred cccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcc
Q 003926 626 KISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADE 705 (786)
Q Consensus 626 kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 705 (786)
||+|||+++............++..|+|||.+....++.++|||||||++|||++|++||...........+.. ...
T Consensus 158 kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~---~~~ 234 (326)
T 2y0a_A 158 KIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSA---VNY 234 (326)
T ss_dssp EECCCTTCEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHH---TCC
T ss_pred EEEECCCCeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHh---cCC
Confidence 99999999766544444455678899999999888899999999999999999999999976544332222211 100
Q ss_pred ccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 706 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
. ..+..... ....+.+++.+||+.||++|||+.|+++|+|+.
T Consensus 235 ----~-~~~~~~~~----~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~ 276 (326)
T 2y0a_A 235 ----E-FEDEYFSN----TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276 (326)
T ss_dssp ----C-CCHHHHTT----SCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTS
T ss_pred ----C-cCcccccc----CCHHHHHHHHHHccCChhhCCCHHHHhcCCCcc
Confidence 0 00111111 123566888899999999999999999999875
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-41 Score=365.67 Aligned_cols=256 Identities=21% Similarity=0.293 Sum_probs=207.6
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.++|+..+.||+|+||.||+|+.+ +|+.||||++...... ..+.+.+|++++++++|||||++++++.+ .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-------~ 100 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE-------E 100 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-------S
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-------C
Confidence 457889999999999999999965 6899999999765432 23578999999999999999999998875 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC---cccccC
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL---VAKISS 629 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~---~~kl~D 629 (786)
+..|+||||+++|+|.+++... ..+++.....++.|++.||.|||+. +|+||||||+|||++.+. .+||+|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~D 174 (362)
T 2bdw_A 101 SFHYLVFDLVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLAD 174 (362)
T ss_dssp SEEEEEECCCCSCBHHHHHTTC---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECC
T ss_pred CEEEEEEecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEee
Confidence 5689999999999999999753 3689999999999999999999998 999999999999998654 599999
Q ss_pred CCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 630 YNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 630 fGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
||++.............++..|+|||.+....|+.++|||||||++|||++|++||...+...+...+... . .
T Consensus 175 fG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~---~----~ 247 (362)
T 2bdw_A 175 FGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG---A----Y 247 (362)
T ss_dssp CTTCBCCTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT---C----C
T ss_pred cCcceEecCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC---C----C
Confidence 99997665444444556888999999998888999999999999999999999999766544333222211 0 0
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
....+. .......+.+++.+||+.||++|||+.|+++|+|+.
T Consensus 248 ~~~~~~-----~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~ 289 (362)
T 2bdw_A 248 DYPSPE-----WDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWIC 289 (362)
T ss_dssp CCCTTG-----GGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHH
T ss_pred CCCccc-----ccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcccC
Confidence 000010 011223567888899999999999999999999875
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-41 Score=367.03 Aligned_cols=258 Identities=16% Similarity=0.247 Sum_probs=208.9
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|+..+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++|||||++++++.. .
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~-------~ 87 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQD-------E 87 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-------S
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe-------C
Confidence 56788899999999999999965 68999999987543 2345789999999999999999999998865 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..|+||||+++|+|.+++... ..+++.....++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 88 ~~~~lv~e~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~ 161 (384)
T 4fr4_A 88 EDMFMVVDLLLGGDLRYHLQQN---VHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNI 161 (384)
T ss_dssp SEEEEEECCCTTEEHHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccce
Confidence 5789999999999999999863 3589999999999999999999998 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCcccccc---CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSAR---GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~---~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
++............++..|+|||.+.. ..|+.++|||||||++|||++|++||...................
T Consensus 162 a~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~----- 236 (384)
T 4fr4_A 162 AAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTV----- 236 (384)
T ss_dssp CEECCTTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCC-----
T ss_pred eeeccCCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcc-----
Confidence 977655555556678899999998863 358999999999999999999999997543322222222211111
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCC-HHHHHHHHHHHHHhh
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPS-VEDVLWNLQFAAQVQ 760 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt-~~evl~~l~~~~~~~ 760 (786)
...+..+ ...+.+++.+||+.||++||+ +.+|..|+||.....
T Consensus 237 ----~~~p~~~----s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~~~w 280 (384)
T 4fr4_A 237 ----VTYPSAW----SQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDINW 280 (384)
T ss_dssp ----CCCCTTS----CHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTTCCH
T ss_pred ----cCCCCcC----CHHHHHHHHHHhcCCHhHhcccHHHHHcChhhhcCCH
Confidence 0011111 235678888999999999998 899999999876433
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-41 Score=366.57 Aligned_cols=257 Identities=19% Similarity=0.378 Sum_probs=204.6
Q ss_pred hcCCCccCccCCCCCceeEEEEec--------CCcEEEEEEecccCC-CChHHHHHHHHHHhcC-CCCCcceeeeeeeec
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK--------NGTFVAIRCLKMKKC-HSTRNFMHHIELISKL-RHRHLVSALGHCFEC 545 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~ 545 (786)
.++|...+.||+|+||.||+|+.. ++..||||+++.... ...+.|.+|+++++++ +|||||+++++|..
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~- 158 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ- 158 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS-
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc-
Confidence 456788899999999999999852 356899999976532 2346799999999999 89999999999864
Q ss_pred cccCCCCceEEEEEecCCCCChhHHhhcCCC-------------CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCC
Q 003926 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGHA-------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNL 612 (786)
Q Consensus 546 ~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdl 612 (786)
.+..|+||||+++|+|.+++..... ...+++..++.++.|+++||+|||+. +|+||||
T Consensus 159 ------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDl 229 (370)
T 2psq_A 159 ------DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDL 229 (370)
T ss_dssp ------SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred ------CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ceecccc
Confidence 3568999999999999999976431 23589999999999999999999997 9999999
Q ss_pred CCCceeecCCCcccccCCCcccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCc
Q 003926 613 KITDILLDQNLVAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRK 688 (786)
Q Consensus 613 k~~NILld~~~~~kl~DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~ 688 (786)
||+|||++.++.+||+|||+++....... .....++..|+|||.+....++.++|||||||++|||+| |+.||...
T Consensus 230 kp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~ 309 (370)
T 2psq_A 230 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 309 (370)
T ss_dssp CGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred chhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 99999999999999999999875433221 122334567999999988889999999999999999999 99999876
Q ss_pred hhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 689 EVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
....+...+.. . . .+.....++ ..+.+++.+||+.||++|||+.|++++|....
T Consensus 310 ~~~~~~~~~~~----~---~----~~~~~~~~~----~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il 363 (370)
T 2psq_A 310 PVEELFKLLKE----G---H----RMDKPANCT----NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 363 (370)
T ss_dssp CGGGHHHHHHT----T---C----CCCCCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHhc----C---C----CCCCCCCCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 55444332211 0 0 011111222 35677888999999999999999999997543
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-40 Score=356.57 Aligned_cols=273 Identities=18% Similarity=0.243 Sum_probs=211.7
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
+.|...+.||+|+||+||+|+.. +|+.||||+++.... ...+.+.+|++++++++||||+++++++... ....
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 83 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEET-----TTRH 83 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECT-----TTCC
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecC-----CCce
Confidence 45778899999999999999965 589999999986542 3467789999999999999999999987642 2346
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceee----cCCCcccccCC
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL----DQNLVAKISSY 630 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILl----d~~~~~kl~Df 630 (786)
.++||||+++|+|.+++........+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+||
T Consensus 84 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Df 160 (319)
T 4euu_A 84 KVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDF 160 (319)
T ss_dssp EEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCC
T ss_pred EEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccC
Confidence 899999999999999998654334599999999999999999999998 99999999999999 88889999999
Q ss_pred CcccccccccccccccccccccCccccc--------cCCCCcccceeehhHHHHHHHhCCCCCCCch-hHHHHHHHHHHH
Q 003926 631 NLPLLAENAEKVGHVIPYSGSIDPTNSA--------RGKLEEKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVV 701 (786)
Q Consensus 631 Gl~~~~~~~~~~~~~~~~~~~~aPe~~~--------~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~-~~~~~~~~~~~~ 701 (786)
|+++............++..|+|||.+. ...++.++|||||||++|||+||+.||.... .......+....
T Consensus 161 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~ 240 (319)
T 4euu_A 161 GAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII 240 (319)
T ss_dssp TTCEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHH
T ss_pred CCceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHh
Confidence 9997665544444556788999999875 4678999999999999999999999986322 111122222222
Q ss_pred Hhcccc-cc---cc----c--cccc--cccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 702 TADESA-RR---SM----V--DPAV--NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 702 ~~~~~~-~~---~~----~--d~~~--~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
...... .. .. . ++.. ...........+.+++.+||+.||++|||++|+++|+.-..
T Consensus 241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp HHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred cCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 211100 00 00 0 0011 11234566677888999999999999999999999997443
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-41 Score=359.72 Aligned_cols=254 Identities=22% Similarity=0.385 Sum_probs=201.8
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
++|...+.||+|+||+||+|+.. +++.||+|++........+.|.+|++++++++|||||++++++.+ .+..
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------~~~~ 82 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYK-------DKRL 82 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-------TTEE
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEec-------CCee
Confidence 45777899999999999999965 699999999876544456789999999999999999999999875 4568
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
++||||+++|+|.+++.... ..++|.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 157 (310)
T 3s95_A 83 NFITEYIKGGTLRGIIKSMD--SQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARL 157 (310)
T ss_dssp EEEEECCTTCBHHHHHHHCC--TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEE
T ss_pred EEEEEecCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeeccccee
Confidence 99999999999999998632 4699999999999999999999997 999999999999999999999999999865
Q ss_pred ccccccc---------------ccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHH--HHHHH
Q 003926 636 AENAEKV---------------GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLL--KNQLQ 698 (786)
Q Consensus 636 ~~~~~~~---------------~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~--~~~~~ 698 (786)
....... ....++..|+|||.+....++.++|||||||++|||++|..|+........ .....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~ 237 (310)
T 3s95_A 158 MVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVR 237 (310)
T ss_dssp CC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHH
T ss_pred cccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhh
Confidence 4322111 134577889999999888999999999999999999999988754211100 00000
Q ss_pred HHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 699 AVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 699 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.. .+......+ ...+.+++.+||+.||++|||+.|+++.+....
T Consensus 238 ~~-----------~~~~~~~~~----~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~ 281 (310)
T 3s95_A 238 GF-----------LDRYCPPNC----PPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281 (310)
T ss_dssp HH-----------HHHTCCTTC----CTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cc-----------ccccCCCCC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 00 000011111 124667888999999999999999999887544
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-41 Score=360.60 Aligned_cols=269 Identities=17% Similarity=0.278 Sum_probs=202.9
Q ss_pred hcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
.++|+..+.||+|+||+||+|+.++|+.||||++...... ..+.+.+|++++++++|||||++++++.. .+
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------~~ 92 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHS-------ER 92 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECC-------SS
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEcc-------CC
Confidence 4568889999999999999999988999999999755332 24678999999999999999999998864 45
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++||||++ |+|.+++.... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 93 ~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a 166 (311)
T 3niz_A 93 CLTLVFEFME-KDLKKVLDENK--TGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLA 166 (311)
T ss_dssp CEEEEEECCS-EEHHHHHHTCT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEEcCCC-CCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCc
Confidence 6899999998 58888887532 3589999999999999999999997 9999999999999999999999999998
Q ss_pred cccccc-cccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHH-hccccccc
Q 003926 634 LLAENA-EKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVT-ADESARRS 710 (786)
Q Consensus 634 ~~~~~~-~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~ 710 (786)
+..... .......++..|+|||.+.. ..++.++|||||||++|||++|++||...........+..... .....+..
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 246 (311)
T 3niz_A 167 RAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQ 246 (311)
T ss_dssp EETTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGG
T ss_pred eecCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhh
Confidence 755322 22334456788999998765 5689999999999999999999999976543332222222111 11111100
Q ss_pred cc-------------cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 711 MV-------------DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 711 ~~-------------d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.. +.............++.+++.+||+.||++|||+.|+++|+||..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~ 306 (311)
T 3niz_A 247 VQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306 (311)
T ss_dssp GTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTT
T ss_pred hhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCccccc
Confidence 00 000000000112245678899999999999999999999998764
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-41 Score=367.16 Aligned_cols=255 Identities=22% Similarity=0.388 Sum_probs=194.6
Q ss_pred cCCCccCccCCCCCceeEEEEec----CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK----NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
++|+..+.||+|+||.||+|+.. ++..||||+++.... ...++|.+|++++++++|||||+++|+|..
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------- 117 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK------- 117 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-------
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee-------
Confidence 57888999999999999999864 577899999976532 234679999999999999999999999864
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
.+..++||||+++|+|.++++.. ...+++.+++.++.|+++||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 118 ~~~~~lv~e~~~~~sL~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg 192 (373)
T 2qol_A 118 SKPVMIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFG 192 (373)
T ss_dssp SSSCEEEEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-
T ss_pred CCceEEEEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCc
Confidence 35689999999999999999863 23689999999999999999999997 99999999999999999999999999
Q ss_pred ccccccccccc----ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccc
Q 003926 632 LPLLAENAEKV----GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADES 706 (786)
Q Consensus 632 l~~~~~~~~~~----~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (786)
+++........ ....++..|+|||.+....++.++|||||||++|||++ |+.||.......+...+.. .
T Consensus 193 ~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~----~-- 266 (373)
T 2qol_A 193 LGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE----G-- 266 (373)
T ss_dssp ---------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHT----T--
T ss_pred cccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc----C--
Confidence 98765432211 11223457999999988899999999999999999998 9999976554333222211 0
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
.. ......+ ...+.+++.+||+.||++||++.||++.+.....
T Consensus 267 -~~----~~~~~~~----~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~ 309 (373)
T 2qol_A 267 -YR----LPPPMDC----PAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309 (373)
T ss_dssp -EE----CCCCTTC----BHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CC----CCCCccc----cHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHh
Confidence 00 0001112 2356788899999999999999999999975543
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-41 Score=367.48 Aligned_cols=254 Identities=18% Similarity=0.220 Sum_probs=200.9
Q ss_pred ccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEEEE
Q 003926 481 TSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIF 559 (786)
Q Consensus 481 ~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV~ 559 (786)
..+.||+|+||.||+|+. .+|+.||||+++.......+.|.+|++++++++|||||++++++.. .+..++||
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-------~~~~~lv~ 165 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFES-------KNDIVLVM 165 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC-------SSEEEEEE
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEE-------CCEEEEEE
Confidence 356899999999999996 4699999999986554456789999999999999999999999875 45689999
Q ss_pred ecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceee--cCCCcccccCCCcccccc
Q 003926 560 EYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL--DQNLVAKISSYNLPLLAE 637 (786)
Q Consensus 560 Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILl--d~~~~~kl~DfGl~~~~~ 637 (786)
||+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+|||+ +.++.+||+|||+++...
T Consensus 166 E~~~~~~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~ 240 (373)
T 2x4f_A 166 EYVDGGELFDRIIDE--SYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYK 240 (373)
T ss_dssp ECCTTCEEHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECC
T ss_pred eCCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecC
Confidence 999999999998753 23589999999999999999999997 99999999999999 677899999999997665
Q ss_pred cccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccccccccc
Q 003926 638 NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVN 717 (786)
Q Consensus 638 ~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 717 (786)
.........++..|+|||.+....++.++|||||||++|||++|++||...........+ ..... .. .+...
T Consensus 241 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i---~~~~~----~~-~~~~~ 312 (373)
T 2x4f_A 241 PREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNI---LACRW----DL-EDEEF 312 (373)
T ss_dssp TTCBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH---HHTCC----CS-CSGGG
T ss_pred CccccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---HhccC----CC-Chhhh
Confidence 444444556788999999998888999999999999999999999999765443322211 11110 00 11111
Q ss_pred ccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 718 KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 718 ~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
. .....+.+++.+||+.||++|||+.|+++|+||...
T Consensus 313 ~----~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~ 349 (373)
T 2x4f_A 313 Q----DISEEAKEFISKLLIKEKSWRISASEALKHPWLSDH 349 (373)
T ss_dssp T----TSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred c----cCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence 1 112356788889999999999999999999998864
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-40 Score=363.07 Aligned_cols=260 Identities=18% Similarity=0.248 Sum_probs=197.7
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
.++|+..+.||+|+||+||+|+.. +++.||||++.... ...+.+.+|+.++++++|||||++++++.. .+.
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-------~~~ 90 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILT-------PTH 90 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEEC-------SSE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEee-------CCE
Confidence 456888999999999999999965 79999999997543 334678999999999999999999999875 456
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCc--ccccCCCc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV--AKISSYNL 632 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~--~kl~DfGl 632 (786)
.++||||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+
T Consensus 91 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~ 164 (361)
T 3uc3_A 91 LAIIMEYASGGELYERICNA---GRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGY 164 (361)
T ss_dssp EEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCC
T ss_pred EEEEEEeCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCc
Confidence 89999999999999999753 3589999999999999999999997 9999999999999988776 99999999
Q ss_pred ccccccccccccccccccccCccccccCCCCcc-cceeehhHHHHHHHhCCCCCCCchh-HHHHHHHHHHHHhccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKLEEK-IDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~k-sDVwSfGvvl~ElltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~ 710 (786)
++............++..|+|||.+....++.+ +|||||||++|||++|++||..... ......+........ .
T Consensus 165 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~----~ 240 (361)
T 3uc3_A 165 SKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKY----S 240 (361)
T ss_dssp C---------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCC----C
T ss_pred cccccccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCC----C
Confidence 865433333344567889999999888777665 8999999999999999999975432 222222222221110 0
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~ 760 (786)
..+. ... ...+.+++.+||+.||++|||+.|+++|+||.+...
T Consensus 241 ~~~~---~~~----s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~~ 283 (361)
T 3uc3_A 241 IPDD---IRI----SPECCHLISRIFVADPATRISIPEIKTHSWFLKNLP 283 (361)
T ss_dssp CCTT---SCC----CHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHTTCC
T ss_pred CCCc---CCC----CHHHHHHHHHHccCChhHCcCHHHHHhCcchhcCCc
Confidence 0000 011 235668888999999999999999999999976543
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-41 Score=366.14 Aligned_cols=254 Identities=20% Similarity=0.292 Sum_probs=203.8
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~ 550 (786)
.++|+..+.||+|+||+||+|+.+ +|+.||||+++... ....+.+.+|.++++.+ +|||||++++++..
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~------ 95 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQT------ 95 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEEC------
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEe------
Confidence 467899999999999999999965 68999999997542 23456788999999988 79999999998865
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
.+..|+|||||++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 96 -~~~~~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DF 168 (353)
T 3txo_A 96 -PDRLFFVMEFVNGGDLMFHIQKS---RRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADF 168 (353)
T ss_dssp -SSEEEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCC
T ss_pred -CCEEEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccc
Confidence 45789999999999999999763 3589999999999999999999998 9999999999999999999999999
Q ss_pred Ccccccc-cccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 631 NLPLLAE-NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 631 Gl~~~~~-~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
|+++... .........++..|+|||.+....|+.++|||||||++|||++|++||.......+...+. ...
T Consensus 169 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~---~~~----- 240 (353)
T 3txo_A 169 GMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAIL---NDE----- 240 (353)
T ss_dssp TTCBCSCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---HCC-----
T ss_pred cceeecccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHH---cCC-----
Confidence 9987532 2223344568889999999988889999999999999999999999998765544332221 111
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCH------HHHHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSV------EDVLWNLQFAAQ 758 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~------~evl~~l~~~~~ 758 (786)
. ..+.. ....+.+++.+||++||++||++ .|+++|+||...
T Consensus 241 -~---~~p~~----~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~ 287 (353)
T 3txo_A 241 -V---VYPTW----LHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEI 287 (353)
T ss_dssp -C---CCCTT----SCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTC
T ss_pred -C---CCCCC----CCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCC
Confidence 0 01111 12346678889999999999998 899999998753
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-41 Score=354.73 Aligned_cols=255 Identities=17% Similarity=0.302 Sum_probs=198.6
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC--------------------------ChHHHHHHHHHHh
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--------------------------STRNFMHHIELIS 528 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--------------------------~~~~f~~E~~~l~ 528 (786)
.++|...+.||+|+||.||+|+.. +|+.||||++...... ..+.|.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 356888999999999999999864 6899999998754311 1356899999999
Q ss_pred cCCCCCcceeeeeeeeccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCcc
Q 003926 529 KLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVF 608 (786)
Q Consensus 529 ~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~iv 608 (786)
+++||||+++++++.. ...+..++||||+++|+|.+++.. ..+++.....++.|+++||+|||+. +|+
T Consensus 92 ~l~h~~iv~~~~~~~~-----~~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~iv 159 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDD-----PNEDHLYMVFELVNQGPVMEVPTL----KPLSEDQARFYFQDLIKGIEYLHYQ---KII 159 (298)
T ss_dssp TCCCTTBCCEEEEEEC-----SSSSEEEEEEECCTTCBSCCSSCS----SCCCHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred hCCCCCCCeEEEEEEc-----CCCCEEEEEEecCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHHC---Cee
Confidence 9999999999998864 224578999999999999887543 3689999999999999999999998 999
Q ss_pred ccCCCCCceeecCCCcccccCCCccccccccc-ccccccccccccCccccccCC---CCcccceeehhHHHHHHHhCCCC
Q 003926 609 SNNLKITDILLDQNLVAKISSYNLPLLAENAE-KVGHVIPYSGSIDPTNSARGK---LEEKIDIYDFGLILLEIIVGRPL 684 (786)
Q Consensus 609 Hrdlk~~NILld~~~~~kl~DfGl~~~~~~~~-~~~~~~~~~~~~aPe~~~~~~---~t~ksDVwSfGvvl~ElltG~~p 684 (786)
||||||+||+++.++.+||+|||++....... ......++..|+|||...... ++.++|||||||++|||++|+.|
T Consensus 160 H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p 239 (298)
T 2zv2_A 160 HRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239 (298)
T ss_dssp CCCCCGGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCS
T ss_pred ccCCCHHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCC
Confidence 99999999999999999999999986554322 223456788999999887654 47889999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 685 KSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
|...........+. ... ... +. .... ...+.+++.+||+.||++|||+.|+++|+|+.
T Consensus 240 f~~~~~~~~~~~~~---~~~----~~~--~~-~~~~----~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~ 297 (298)
T 2zv2_A 240 FMDERIMCLHSKIK---SQA----LEF--PD-QPDI----AEDLKDLITRMLDKNPESRIVVPEIKLHPWVT 297 (298)
T ss_dssp SCCSSHHHHHHHHH---HCC----CCC--CS-SSCC----CHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred CCCccHHHHHHHHh---ccc----CCC--CC-cccc----CHHHHHHHHHHhhcChhhCCCHHHHhcCcccc
Confidence 97655433222211 110 000 00 0111 23466788899999999999999999999975
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-41 Score=400.28 Aligned_cols=325 Identities=27% Similarity=0.329 Sum_probs=222.9
Q ss_pred ccCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCCCCCccEEeCCCCEEEEEeCCCCCCCC---CCCCCc-------
Q 003926 26 EQLQSSQAQTLLRIQGLLNNPAVLSSWNITTEFCNTEPTSSLTVVCYEESITQLHIVGNKRAPM---LPLSFS------- 95 (786)
Q Consensus 26 ~~~~~~~~~~ll~~k~~~~~~~~l~~W~~~~~~C~w~~~~~~~v~c~~~~v~~l~l~~~~~~~~---l~~~~~------- 95 (786)
.++.++|++||++||+++.||..+++|+.+++||.|. ||+|+.++|++|+|+++.+.|. +|..+.
T Consensus 7 ~~~~~~~~~all~~k~~~~~~~~l~~W~~~~~~C~w~-----gv~C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~ 81 (768)
T 3rgz_A 7 SQSLYREIHQLISFKDVLPDKNLLPDWSSNKNPCTFD-----GVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLES 81 (768)
T ss_dssp -CCHHHHHHHHHHHHTTCSCTTSSTTCCTTSCGGGST-----TEEEETTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCE
T ss_pred ccCCHHHHHHHHHHHhhCCCcccccCCCCCCCCcCCc-----ceEECCCcEEEEECCCCCcCCccCccChhHhccCcccc
Confidence 3456789999999999998887889999888999998 5999988999999999988875 443111
Q ss_pred ----C---CccccccCCCCCCCEEEccCCCCccCCCc--cCCCCCCCCEEeccCCCCCCCCCccc-cCCCCCcEEEcccc
Q 003926 96 ----M---DSFVTTLVKLPDLKVLRLVSLGLWGPLSG--KISRLSSLEILNMSSNFLNGAIPQEL-SILTSLQTLILDEN 165 (786)
Q Consensus 96 ----~---~~~~~~l~~l~~L~~L~L~~n~l~g~~~~--~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N 165 (786)
. ..++..++++++|++|+|++|.+.|.+|. .++++++|++|+|++|.+++.+|..+ .++++|++|+|++|
T Consensus 82 l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n 161 (768)
T 3rgz_A 82 LFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSAN 161 (768)
T ss_dssp EECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSS
T ss_pred cCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCC
Confidence 1 12346788899999999999999988888 88999999999999999988888766 78888888888888
Q ss_pred cCCCCCCcc---cCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCC
Q 003926 166 MLAGRVPDW---LGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQF 242 (786)
Q Consensus 166 ~l~~~~p~~---~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~ 242 (786)
++++..|.. +.++++|++|++++|.+++.+|. .++++|++|+|++|.+++.+|.++.+++|++|+|++|.+++.+
T Consensus 162 ~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~ 239 (768)
T 3rgz_A 162 SISGANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDF 239 (768)
T ss_dssp CCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCBCTTCCSCCEEECCSSCCCSCH
T ss_pred ccCCcCChhhhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcccccCCCCCEEECcCCcCCCcc
Confidence 888777765 66666666666666666654442 5556666666666666655555555556666666665555544
Q ss_pred Ccc-------------------------ccchhhhhccCCccCCcChhhhcCc-cccceeeccCccccCCCchhhCCCCC
Q 003926 243 PKV-------------------------GKKLVTMILSKNKFRSAIPAEVSSY-YQLQRLDLSSNRFVGPFPQALLSLPS 296 (786)
Q Consensus 243 p~~-------------------------~~~L~~L~ls~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~ 296 (786)
|.. .++|++|++++|.+++.+|..+... ++|+.|+|++|++++.+|..|+++++
T Consensus 240 ~~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~ 319 (768)
T 3rgz_A 240 SRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSL 319 (768)
T ss_dssp HHHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTT
T ss_pred cHHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCC
Confidence 432 2345555555555555555555443 55666666666665555666666666
Q ss_pred CcEEEeecCCCCcccCcc-CCCCCCCCEEeCcCCcCCccCChhhhcCC-CCcEEEcCCcccCC
Q 003926 297 ITYLNIADNKLTGKLFDD-LSCNPELGFVDLSSNLLTGQLPNCLLAGS-KNRVVLYARNCLAA 357 (786)
Q Consensus 297 L~~L~l~~N~l~g~~~~~-~~~~~~L~~l~ls~N~l~g~~p~~~~~~~-~~~~~~~~~N~l~~ 357 (786)
|+.|++++|+++|.+|.. +..+++|+.|++++|.++|.+|..+.... .++.+++++|.+++
T Consensus 320 L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~ 382 (768)
T 3rgz_A 320 LESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSG 382 (768)
T ss_dssp CCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEE
T ss_pred ccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCC
Confidence 666666666665555544 55556666666666666656665555544 55666666665554
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-41 Score=368.07 Aligned_cols=258 Identities=16% Similarity=0.201 Sum_probs=208.8
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
.++|+..+.||+|+||.||+|+.. +|+.||+|++..........+.+|++++++++|||||++++++.. ...
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-------~~~ 122 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFED-------KYE 122 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEEC-------SSE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEe-------CCE
Confidence 457889999999999999999965 689999999976543345679999999999999999999998865 457
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC--CCcccccCCCc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ--NLVAKISSYNL 632 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~--~~~~kl~DfGl 632 (786)
.++||||+++|+|.+++... ...+++.....++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+
T Consensus 123 ~~lv~E~~~gg~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~ 197 (387)
T 1kob_A 123 MVLILEFLSGGELFDRIAAE--DYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGL 197 (387)
T ss_dssp EEEEEECCCCCBHHHHTTCT--TCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTT
T ss_pred EEEEEEcCCCCcHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEeccc
Confidence 89999999999999999753 23689999999999999999999997 9999999999999974 47799999999
Q ss_pred ccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
++............++..|+|||.+....++.++|||||||++|||++|++||...........+. .... ..
T Consensus 198 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~---~~~~-----~~ 269 (387)
T 1kob_A 198 ATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVK---RCDW-----EF 269 (387)
T ss_dssp CEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHH---HCCC-----CC
T ss_pred ceecCCCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHH---hCCC-----CC
Confidence 976654444444567889999999988889999999999999999999999997655433222211 1110 01
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
++.... .....+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 270 ~~~~~~----~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 310 (387)
T 1kob_A 270 DEDAFS----SVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKG 310 (387)
T ss_dssp CSSTTT----TSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSS
T ss_pred Cccccc----cCCHHHHHHHHHHcCCChhHCcCHHHHhhCccccC
Confidence 111111 12235678888999999999999999999998753
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-41 Score=373.72 Aligned_cols=267 Identities=13% Similarity=0.176 Sum_probs=211.3
Q ss_pred HHHHHHHhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCcceeeeeeee
Q 003926 469 LEELEEATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFE 544 (786)
Q Consensus 469 ~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~ 544 (786)
+.++...+++|+..++||+|+||+||+|+.+ +++.||||+++... ....+.+.+|+.++++++|||||+++++|.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 4556666789999999999999999999976 58899999997532 2233458999999999999999999998875
Q ss_pred ccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCc
Q 003926 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV 624 (786)
Q Consensus 545 ~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~ 624 (786)
.+..|+|||||++|+|.+++.+. ...+++.....++.|++.||+|||+. +||||||||+|||+|.++.
T Consensus 146 -------~~~~~lV~Ey~~gg~L~~~l~~~--~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~ 213 (437)
T 4aw2_A 146 -------DNNLYLVMDYYVGGDLLTLLSKF--EDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGH 213 (437)
T ss_dssp -------SSEEEEEECCCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSC
T ss_pred -------CCEEEEEEecCCCCcHHHHHHHc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCC
Confidence 46789999999999999999863 23689999999999999999999997 9999999999999999999
Q ss_pred ccccCCCcccccccccc--cccccccccccCccccc-----cCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHH
Q 003926 625 AKISSYNLPLLAENAEK--VGHVIPYSGSIDPTNSA-----RGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQL 697 (786)
Q Consensus 625 ~kl~DfGl~~~~~~~~~--~~~~~~~~~~~aPe~~~-----~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~ 697 (786)
+||+|||+++....... .....++..|+|||.+. .+.|+.++|||||||++|||++|++||...+.......+
T Consensus 214 vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i 293 (437)
T 4aw2_A 214 IRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 293 (437)
T ss_dssp EEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH
T ss_pred EEEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhh
Confidence 99999999865533222 23356889999999986 456899999999999999999999999876544332222
Q ss_pred HHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCC--CCCHHHHHHHHHHHHH
Q 003926 698 QAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAE--RPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 698 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~--RPt~~evl~~l~~~~~ 758 (786)
....... .-|...... ...+.+++.+|++.+|++ ||++.|+++|+||...
T Consensus 294 ~~~~~~~-------~~p~~~~~~----s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i 345 (437)
T 4aw2_A 294 MNHKERF-------QFPTQVTDV----SENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGI 345 (437)
T ss_dssp HTHHHHC-------CCCSSCCCS----CHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTC
T ss_pred hhccccc-------cCCcccccC----CHHHHHHHHHHhcccccccCCCCHHHHhCCCccCCC
Confidence 1110000 001110111 234567888999888888 9999999999998753
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-41 Score=364.05 Aligned_cols=259 Identities=16% Similarity=0.254 Sum_probs=205.1
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC-----CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK-----CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-----~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
+.|+..+.||+|+||+||+|+.+ +|+.||||+++... ....+.+.+|++++++++|||||++++++..
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~------ 97 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSS------ 97 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEE------
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEe------
Confidence 45888999999999999999864 69999999986432 1246789999999999999999999998875
Q ss_pred CCceEEEEEecCCCCChhHHhhcC-CCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCc---cc
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEG-HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV---AK 626 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~---~k 626 (786)
.+..|+|||||++|+|.+++... .....+++.....++.|++.||+|||+. +|+||||||+|||++.++. +|
T Consensus 98 -~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vk 173 (351)
T 3c0i_A 98 -DGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVK 173 (351)
T ss_dssp -TTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEE
T ss_pred -CCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEE
Confidence 45789999999999999887642 1223589999999999999999999997 9999999999999987654 99
Q ss_pred ccCCCccccccccc-ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcc
Q 003926 627 ISSYNLPLLAENAE-KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADE 705 (786)
Q Consensus 627 l~DfGl~~~~~~~~-~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 705 (786)
|+|||++....... ......++..|+|||.+....++.++|||||||++|||++|++||............ ....
T Consensus 174 l~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~i~----~~~~ 249 (351)
T 3c0i_A 174 LGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGII----KGKY 249 (351)
T ss_dssp ECCCTTCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHHHH----HTCC
T ss_pred EecCcceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHHHH----cCCC
Confidence 99999986654322 223456788999999998888999999999999999999999999765432221111 1100
Q ss_pred ccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 706 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
..++..... ....+.+++.+||+.||++|||+.|+++|+|+...
T Consensus 250 -----~~~~~~~~~----~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~ 293 (351)
T 3c0i_A 250 -----KMNPRQWSH----ISESAKDLVRRMLMLDPAERITVYEALNHPWLKER 293 (351)
T ss_dssp -----CCCHHHHTT----SCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTH
T ss_pred -----CCCcccccc----CCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcCC
Confidence 011111111 12356788889999999999999999999998753
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-40 Score=344.59 Aligned_cols=253 Identities=20% Similarity=0.365 Sum_probs=204.8
Q ss_pred cCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~ 556 (786)
++|+..+.||+|+||.||+|+..++..||||++.... ...++|.+|++++++++||||+++++++.+ .+..+
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------~~~~~ 81 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLE-------QAPIC 81 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECS-------SSSEE
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEec-------CCceE
Confidence 4677889999999999999998888999999997654 345789999999999999999999998864 35689
Q ss_pred EEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccc
Q 003926 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636 (786)
Q Consensus 557 LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~ 636 (786)
+||||+++|+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 82 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 156 (269)
T 4hcu_A 82 LVFEFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFV 156 (269)
T ss_dssp EEEECCTTCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGB
T ss_pred EEEEeCCCCcHHHHHHhcC--cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccc
Confidence 9999999999999997632 3689999999999999999999997 9999999999999999999999999998755
Q ss_pred cccc--ccccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccccccccc
Q 003926 637 ENAE--KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMVD 713 (786)
Q Consensus 637 ~~~~--~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 713 (786)
.... ......++..|+|||......++.++||||+|+++|||++ |++||...........+.. .. ....
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~---~~-----~~~~ 228 (269)
T 4hcu_A 157 LDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST---GF-----RLYK 228 (269)
T ss_dssp CCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT---TC-----CCCC
T ss_pred cccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhc---Cc-----cCCC
Confidence 3322 1122334557999999988899999999999999999999 9999987654433222211 10 0111
Q ss_pred ccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 714 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
+ ... ...+.+++.+||+.||++|||+.|+++++....
T Consensus 229 ~---~~~----~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~ 265 (269)
T 4hcu_A 229 P---RLA----STHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA 265 (269)
T ss_dssp C---TTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred C---CcC----CHHHHHHHHHHccCCcccCcCHHHHHHHHHHHH
Confidence 1 111 234667888999999999999999999997543
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-40 Score=358.99 Aligned_cols=259 Identities=18% Similarity=0.343 Sum_probs=200.4
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCc----EEEEEEecccC-CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGT----FVAIRCLKMKK-CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~----~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
++|+..+.||+|+||+||+|+.. +|+ .||+|.++... ....++|.+|++++++++|||||+++++|..
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------ 88 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT------ 88 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEES------
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec------
Confidence 45778899999999999999954 444 36888876443 2346789999999999999999999999874
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
+..++|+||+++|+|.+++.... ..+++..++.++.|+++||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 89 --~~~~~v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Df 161 (327)
T 3poz_A 89 --STVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDF 161 (327)
T ss_dssp --SSEEEEEECCTTCBHHHHHHHST--TSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCT
T ss_pred --CCeEEEEEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccC
Confidence 23789999999999999998642 3689999999999999999999997 9999999999999999999999999
Q ss_pred Cccccccccccc---ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccc
Q 003926 631 NLPLLAENAEKV---GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADES 706 (786)
Q Consensus 631 Gl~~~~~~~~~~---~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (786)
|+++........ ....++..|+|||.+....++.++|||||||++|||+| |+.||.......+...+.. ..
T Consensus 162 g~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~----~~- 236 (327)
T 3poz_A 162 GLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK----GE- 236 (327)
T ss_dssp THHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT----TC-
T ss_pred cceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHc----CC-
Confidence 999765432221 12234567999999998999999999999999999999 9999987655444333221 10
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhhhhh
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAW 763 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~~~~ 763 (786)
.. .....+ ...+.+++.+||+.||++||++.||++++.........+
T Consensus 237 ---~~---~~~~~~----~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~~~~~ 283 (327)
T 3poz_A 237 ---RL---PQPPIC----TIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRY 283 (327)
T ss_dssp ---CC---CCCTTB----CHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTSHHHH
T ss_pred ---CC---CCCccC----CHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhhhhhh
Confidence 00 001112 235678888999999999999999999998665544333
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-40 Score=359.48 Aligned_cols=261 Identities=19% Similarity=0.348 Sum_probs=201.8
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeeecccc-----
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFD----- 548 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~----- 548 (786)
.++|+..+.||+|+||.||+|+.+ +|+.||||+++..... ..+.|.+|++++++++|||||++++++.+....
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 456888999999999999999976 7999999999755433 357799999999999999999999998652110
Q ss_pred ---------------------------------------------CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHH
Q 003926 549 ---------------------------------------------DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWT 583 (786)
Q Consensus 549 ---------------------------------------------~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~ 583 (786)
.......++|||||++|+|.+++.........++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 01122479999999999999999876544567888
Q ss_pred HHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccccccc-------------cccccccccc
Q 003926 584 QRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE-------------KVGHVIPYSG 650 (786)
Q Consensus 584 ~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~-------------~~~~~~~~~~ 650 (786)
.++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... ......++..
T Consensus 165 ~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 8999999999999999997 99999999999999999999999999986654321 1123457788
Q ss_pred ccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHH
Q 003926 651 SIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMME 730 (786)
Q Consensus 651 ~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 730 (786)
|+|||.+....++.++|||||||++|||++|..|+.... ......... ..+. ........+.+
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~-----~~~~~~~~~--------~~~~----~~~~~~~~~~~ 304 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV-----RIITDVRNL--------KFPL----LFTQKYPQEHM 304 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH-----HHHHHHHTT--------CCCH----HHHHHCHHHHH
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH-----HHHHHhhcc--------CCCc----ccccCChhHHH
Confidence 999999988899999999999999999999977642111 111111000 0011 11223345678
Q ss_pred HHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 731 VCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 731 l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
++.+||+.||++|||+.|+++|+||.
T Consensus 305 li~~~l~~~p~~Rps~~~~l~~~~f~ 330 (332)
T 3qd2_B 305 MVQDMLSPSPTERPEATDIIENAIFE 330 (332)
T ss_dssp HHHHHHCSSGGGSCCHHHHHHSTTCC
T ss_pred HHHHHccCCCCcCCCHHHHhhchhhh
Confidence 88999999999999999999988753
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-40 Score=355.12 Aligned_cols=251 Identities=20% Similarity=0.310 Sum_probs=206.6
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
.++|+..+.||+|+||.||+|+.+ +|+.||+|+++... ....+.+.+|+.+++.++|||||++++++.+
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~------- 77 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQD------- 77 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEEC-------
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEe-------
Confidence 356888999999999999999965 69999999997542 2345778899999999999999999998864
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
.+..|+||||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 78 ~~~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg 151 (318)
T 1fot_A 78 AQQIFMIMDYIEGGELFSLLRKS---QRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFG 151 (318)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHT---SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCS
T ss_pred CCEEEEEEeCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecC
Confidence 45789999999999999999863 3589999999999999999999997 99999999999999999999999999
Q ss_pred cccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 632 LPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 632 l~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
+++..... .....++..|+|||.+....++.++|||||||++|||++|++||...........+ ....
T Consensus 152 ~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i---~~~~------- 219 (318)
T 1fot_A 152 FAKYVPDV--TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKI---LNAE------- 219 (318)
T ss_dssp SCEECSSC--BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH---HHCC-------
T ss_pred cceecCCc--cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHH---HhCC-------
Confidence 98765432 23456788999999998888999999999999999999999999765443322211 1111
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERP-----SVEDVLWNLQFAA 757 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~~l~~~~ 757 (786)
...+... ...+.+++.+||+.||++|| ++.||++|+||..
T Consensus 220 --~~~p~~~----~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~ 264 (318)
T 1fot_A 220 --LRFPPFF----NEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKE 264 (318)
T ss_dssp --CCCCTTS----CHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSS
T ss_pred --CCCCCCC----CHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccC
Confidence 0011111 23466788899999999999 9999999999874
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-40 Score=358.21 Aligned_cols=254 Identities=20% Similarity=0.364 Sum_probs=201.0
Q ss_pred cCCCccCccCCCCCceeEEEEec----CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK----NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
++|...+.||+|+||.||+|+.. .+..||||+++.... ...+.|.+|++++++++|||||++++++..
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------- 121 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTR------- 121 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECG-------
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe-------
Confidence 46778899999999999999974 355799999976532 234679999999999999999999999865
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
.+..++||||+++|+|.+++.... ..+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||
T Consensus 122 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg 196 (325)
T 3kul_A 122 GRLAMIVTEYMENGSLDTFLRTHD--GQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFG 196 (325)
T ss_dssp GGCCEEEEECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCS
T ss_pred CCccEEEeeCCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCC
Confidence 356899999999999999997532 3699999999999999999999997 99999999999999999999999999
Q ss_pred cccccccccc----cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccc
Q 003926 632 LPLLAENAEK----VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADES 706 (786)
Q Consensus 632 l~~~~~~~~~----~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (786)
+++....... .....++..|+|||.+....++.++|||||||++|||++ |+.||...........+.. ..
T Consensus 197 ~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~---~~-- 271 (325)
T 3kul_A 197 LSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEE---GY-- 271 (325)
T ss_dssp SCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHT---TC--
T ss_pred cccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHc---CC--
Confidence 9876533221 112233457999999988889999999999999999999 9999976554433222211 00
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.......++ ..+.+++.+||+.||++|||+.||++.|....
T Consensus 272 ------~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~ 312 (325)
T 3kul_A 272 ------RLPAPMGCP----HALHQLMLDCWHKDRAQRPRFSQIVSVLDALI 312 (325)
T ss_dssp ------CCCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ------CCCCCCCcC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 011111222 35678888999999999999999999997554
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-41 Score=360.98 Aligned_cols=258 Identities=19% Similarity=0.303 Sum_probs=202.2
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
.++|+..+.||+|+||+||+|+.. +++.||||++..... ...+.+.+|+.++++++|||||++++++.+ .+
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-------~~ 78 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE-------GN 78 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEEC-------SS
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEec-------CC
Confidence 357888999999999999999965 799999999875543 234668999999999999999999999875 45
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a 152 (323)
T 3tki_A 79 IQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLA 152 (323)
T ss_dssp EEEEEEECCTTEEGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEEcCCCCcHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeecc
Confidence 689999999999999999753 3589999999999999999999997 9999999999999999999999999998
Q ss_pred ccccccc---ccccccccccccCccccccCCC-CcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 634 LLAENAE---KVGHVIPYSGSIDPTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 634 ~~~~~~~---~~~~~~~~~~~~aPe~~~~~~~-t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
+...... ......++..|+|||.+....+ +.++|||||||++|||++|+.||.......... ...... .
T Consensus 153 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~--~~~~~~-----~ 225 (323)
T 3tki_A 153 TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY--SDWKEK-----K 225 (323)
T ss_dssp EECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHH--HHHHTT-----C
T ss_pred ceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHH--HHHhcc-----c
Confidence 6543221 2234567888999999877665 779999999999999999999997543321110 000000 0
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQV 759 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~ 759 (786)
...++ .......+.+++.+||+.||++|||+.|+++|+|+.+..
T Consensus 226 ~~~~~------~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~ 269 (323)
T 3tki_A 226 TYLNP------WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL 269 (323)
T ss_dssp TTSTT------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred ccCCc------cccCCHHHHHHHHHHccCChhhCcCHHHHhhChhhcccc
Confidence 00011 011123456788899999999999999999999987543
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-40 Score=365.44 Aligned_cols=258 Identities=19% Similarity=0.275 Sum_probs=204.5
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC---ChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH---STRNFMHHIELISKL-RHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~---~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~ 550 (786)
.++|+..+.||+|+||+||+|+.+ +++.||||+++..... ..+.+.+|..++.++ +|||||++++++..
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~------ 124 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT------ 124 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEEC------
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEE------
Confidence 457888999999999999999965 6889999999865332 235688999999887 89999999998865
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
.+..|+||||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 125 -~~~~~lV~E~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DF 197 (396)
T 4dc2_A 125 -ESRLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDY 197 (396)
T ss_dssp -SSEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCC
T ss_pred -CCEEEEEEEcCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeec
Confidence 46789999999999999999753 3589999999999999999999998 9999999999999999999999999
Q ss_pred Cccccc-ccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHH-----HHHHHHHHHHhc
Q 003926 631 NLPLLA-ENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL-----LKNQLQAVVTAD 704 (786)
Q Consensus 631 Gl~~~~-~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~-----~~~~~~~~~~~~ 704 (786)
|+++.. ..........++..|+|||.+....|+.++|||||||++|||++|++||....... ....+.......
T Consensus 198 Gla~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~ 277 (396)
T 4dc2_A 198 GMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK 277 (396)
T ss_dssp TTCBCCCCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHC
T ss_pred ceeeecccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcc
Confidence 999753 23333445678899999999998899999999999999999999999996321100 001111111111
Q ss_pred cccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCH------HHHHHHHHHHHH
Q 003926 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSV------EDVLWNLQFAAQ 758 (786)
Q Consensus 705 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~------~evl~~l~~~~~ 758 (786)
. ...+.. ....+.+++.+||+.||++||++ .||++|+||...
T Consensus 278 ~--------~~~p~~----~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i 325 (396)
T 4dc2_A 278 Q--------IRIPRS----LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 325 (396)
T ss_dssp C--------CCCCTT----SCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTC
T ss_pred c--------cCCCCc----CCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCC
Confidence 0 111111 12356688889999999999984 899999998753
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-40 Score=350.44 Aligned_cols=267 Identities=19% Similarity=0.293 Sum_probs=201.8
Q ss_pred cCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
++|...+.||+|+||+||+|+..+|+.||||++..... ...+.+.+|++++++++||||+++++++.. .+.
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------~~~ 74 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHT-------KKR 74 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEEC-------SSC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEcc-------CCe
Confidence 46788899999999999999988899999999975432 234778999999999999999999999865 356
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++||||+++ +|.+++.... ..+++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 75 ~~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 148 (288)
T 1ob3_A 75 LVLVFEHLDQ-DLKKLLDVCE--GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLAR 148 (288)
T ss_dssp EEEEEECCSE-EHHHHHHTST--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHH
T ss_pred EEEEEEecCC-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECcccc
Confidence 8999999985 9999987532 3589999999999999999999997 99999999999999999999999999986
Q ss_pred ccccc-cccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHh-ccccccc-
Q 003926 635 LAENA-EKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTA-DESARRS- 710 (786)
Q Consensus 635 ~~~~~-~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~- 710 (786)
..... .......++..|+|||.+.. ..++.++|||||||++|||++|++||...........+...... ....+..
T Consensus 149 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (288)
T 1ob3_A 149 AFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNV 228 (288)
T ss_dssp HHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTG
T ss_pred ccCccccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhh
Confidence 54322 22233456788999998865 45899999999999999999999999765433222222111111 1000000
Q ss_pred ----ccccccc-------ccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 711 ----MVDPAVN-------KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 711 ----~~d~~~~-------~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
..++... ..........+.+++.+||+.||++|||+.|+++|+||.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~ 285 (288)
T 1ob3_A 229 TELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285 (288)
T ss_dssp GGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGG
T ss_pred hcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchh
Confidence 0111100 001111234567888999999999999999999998875
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-40 Score=354.82 Aligned_cols=272 Identities=19% Similarity=0.319 Sum_probs=194.2
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
.++|+..+.||+|+||.||+|+.+ +|+.||||+++.... ...+.+.+|++++++++|||||++++++.. .+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------~~ 76 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHT-------EN 76 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECC-------TT
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEE-------CC
Confidence 457888999999999999999964 689999999975543 335779999999999999999999998864 45
Q ss_pred eEEEEEecCCCCChhHHhhcC---CCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 554 RIFLIFEYVPNGTLRSWISEG---HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~---~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
..++||||++ |+|.+++... .....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+||
T Consensus 77 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Df 152 (317)
T 2pmi_A 77 KLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDF 152 (317)
T ss_dssp EEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCC
T ss_pred eEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcC
Confidence 7899999998 6999988642 1223589999999999999999999997 9999999999999999999999999
Q ss_pred Ccccccccc-cccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHh-cccc
Q 003926 631 NLPLLAENA-EKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTA-DESA 707 (786)
Q Consensus 631 Gl~~~~~~~-~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~-~~~~ 707 (786)
|+++..... .......++..|+|||.+.. ..++.++|||||||++|||+||++||...........+...... ....
T Consensus 153 g~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 232 (317)
T 2pmi_A 153 GLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESL 232 (317)
T ss_dssp SSCEETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTT
T ss_pred ccceecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhH
Confidence 998655322 22234456788999998865 46899999999999999999999999775544333322222111 1000
Q ss_pred cccc-----cccccc------------ccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 708 RRSM-----VDPAVN------------KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 708 ~~~~-----~d~~~~------------~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
+... ..+... ..........+.+++.+||+.||++|||+.|+++|+||.+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~ 300 (317)
T 2pmi_A 233 WPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEY 300 (317)
T ss_dssp CGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGG
T ss_pred hhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcc
Confidence 0000 000000 00000122357788899999999999999999999998754
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-40 Score=352.61 Aligned_cols=277 Identities=18% Similarity=0.284 Sum_probs=206.9
Q ss_pred HhcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCC-----CChHHHHHHHHHHhcCC---CCCcceeeeeeeec
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC-----HSTRNFMHHIELISKLR---HRHLVSALGHCFEC 545 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~-----~~~~~f~~E~~~l~~l~---H~NIv~l~g~~~~~ 545 (786)
..++|+..+.||+|+||+||+|+. .+|+.||||++..... .....+.+|++++++++ ||||++++++|...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 356899999999999999999995 5799999999875432 12357788888887775 99999999998752
Q ss_pred cccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcc
Q 003926 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVA 625 (786)
Q Consensus 546 ~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~ 625 (786)
.. ......++||||++ |+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 87 ~~--~~~~~~~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~ 159 (308)
T 3g33_A 87 RT--DREIKVTLVFEHVD-QDLRTYLDKAP-PPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTV 159 (308)
T ss_dssp CS--SSEEEEEEEEECCC-CBHHHHHHTCC-TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCE
T ss_pred CC--CCceeEEEEehhhh-cCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCE
Confidence 11 11225799999998 69999998643 23599999999999999999999998 99999999999999999999
Q ss_pred cccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHH-hc
Q 003926 626 KISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVT-AD 704 (786)
Q Consensus 626 kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~-~~ 704 (786)
||+|||+++............++..|+|||.+....++.++|||||||++|||++|++||...........+..... ..
T Consensus 160 kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~ 239 (308)
T 3g33_A 160 KLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP 239 (308)
T ss_dssp EECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred EEeeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 99999999766544444556678899999999888999999999999999999999999977554333222222211 11
Q ss_pred ccccccc-------cccccc---ccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 705 ESARRSM-------VDPAVN---KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 705 ~~~~~~~-------~d~~~~---~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
...+... +.+... .....+....+.+++.+||+.||++|||+.|+++|+|+.+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~ 303 (308)
T 3g33_A 240 EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKD 303 (308)
T ss_dssp TTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC---
T ss_pred hhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccCC
Confidence 1111100 000000 00001123456788899999999999999999999987753
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-41 Score=369.06 Aligned_cols=262 Identities=15% Similarity=0.235 Sum_probs=209.4
Q ss_pred HHHHHHhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCcceeeeeeeec
Q 003926 470 EELEEATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFEC 545 (786)
Q Consensus 470 ~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~ 545 (786)
.++....++|+..+.||+|+||+||+|+.+ +++.||+|+++... ....+.+.+|+.+++.++|||||++++++.+
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~- 140 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD- 140 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC-
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE-
Confidence 445556788999999999999999999975 58999999997532 2334568899999999999999999998865
Q ss_pred cccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcc
Q 003926 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVA 625 (786)
Q Consensus 546 ~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~ 625 (786)
.+..|+|||||++|+|.+++... .+++.....++.|++.||+|||+. +|+||||||+|||+|.++.+
T Consensus 141 ------~~~~~lV~E~~~gg~L~~~l~~~----~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~i 207 (410)
T 3v8s_A 141 ------DRYLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHL 207 (410)
T ss_dssp ------SSEEEEEECCCTTEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCE
T ss_pred ------CCEEEEEEeCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCE
Confidence 46789999999999999999753 488999999999999999999997 99999999999999999999
Q ss_pred cccCCCccccccccc--ccccccccccccCccccccCC----CCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHH
Q 003926 626 KISSYNLPLLAENAE--KVGHVIPYSGSIDPTNSARGK----LEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQA 699 (786)
Q Consensus 626 kl~DfGl~~~~~~~~--~~~~~~~~~~~~aPe~~~~~~----~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~ 699 (786)
||+|||+++...... ......++..|+|||.+.... |+.++|||||||++|||+||++||...+.......+..
T Consensus 208 kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~ 287 (410)
T 3v8s_A 208 KLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMN 287 (410)
T ss_dssp EECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT
T ss_pred EEeccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHh
Confidence 999999997654332 223456889999999987654 78999999999999999999999987654433322211
Q ss_pred HHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCC--CCCHHHHHHHHHHHH
Q 003926 700 VVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAE--RPSVEDVLWNLQFAA 757 (786)
Q Consensus 700 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~--RPt~~evl~~l~~~~ 757 (786)
..... .. |. ... ....+.+++.+||+.+|++ ||++.||++|+||..
T Consensus 288 ~~~~~-----~~--p~-~~~----~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~ 335 (410)
T 3v8s_A 288 HKNSL-----TF--PD-DND----ISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKN 335 (410)
T ss_dssp HHHHC-----CC--CT-TCC----CCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCC
T ss_pred ccccc-----cC--CC-ccc----ccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccC
Confidence 11000 00 00 001 1234667888999999988 999999999999875
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-40 Score=375.51 Aligned_cols=254 Identities=22% Similarity=0.374 Sum_probs=205.7
Q ss_pred HHHhcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 473 EEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 473 ~~~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
+...++|+..+.||+|+||.||+|+.+++..||||+++... ...++|.+|+++|++++|||||++++++..
T Consensus 184 ~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~-------- 254 (454)
T 1qcf_A 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-------- 254 (454)
T ss_dssp BCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEECS--------
T ss_pred eechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEeC--------
Confidence 34456788889999999999999999888999999998643 457889999999999999999999998752
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..++|||||++|+|.++++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 255 ~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~ 330 (454)
T 1qcf_A 255 EPIYIITEFMAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGL 330 (454)
T ss_dssp SSCEEEECCCTTCBHHHHHHSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTG
T ss_pred CccEEEEeecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCC
Confidence 35799999999999999997531 23588999999999999999999997 999999999999999999999999999
Q ss_pred ccccccccc--cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 633 PLLAENAEK--VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 633 ~~~~~~~~~--~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
++....... .....++..|+|||.+..+.++.++|||||||++|||+| |+.||.......+...+.. ..
T Consensus 331 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~---~~----- 402 (454)
T 1qcf_A 331 ARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER---GY----- 402 (454)
T ss_dssp GGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHH---TC-----
T ss_pred ceEcCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc---CC-----
Confidence 976543221 112234567999999988899999999999999999999 9999976554443332221 10
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
.+. .+..++ ..+.+++.+||+.||++|||+.+|++.|+
T Consensus 403 ~~~---~~~~~~----~~l~~li~~cl~~dp~~RPt~~~i~~~L~ 440 (454)
T 1qcf_A 403 RMP---RPENCP----EELYNIMMRCWKNRPEERPTFEYIQSVLD 440 (454)
T ss_dssp CCC---CCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCC---CCCCCC----HHHHHHHHHHccCChhHCcCHHHHHHHHH
Confidence 000 111222 35678888999999999999999999886
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-40 Score=370.40 Aligned_cols=258 Identities=19% Similarity=0.261 Sum_probs=206.5
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.++|+..+.||+|+||+||+|+. .+|+.||+|++...... ..+.+.+|++++++++|||||++++++.+ .
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-------~ 82 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISE-------E 82 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEEC-------S
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEE-------C
Confidence 45688899999999999999985 47999999999765432 24568999999999999999999998865 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeec---CCCcccccC
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD---QNLVAKISS 629 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld---~~~~~kl~D 629 (786)
+..|+|||||++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++ .++.+||+|
T Consensus 83 ~~~~lv~E~~~gg~L~~~i~~~---~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~D 156 (444)
T 3soa_A 83 GHHYLIFDLVTGGELFEDIVAR---EYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLAD 156 (444)
T ss_dssp SEEEEEECCCBCCBHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECC
T ss_pred CEEEEEEEeCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEcc
Confidence 6789999999999999999763 3589999999999999999999998 999999999999998 467899999
Q ss_pred CCccccccccc-ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccc
Q 003926 630 YNLPLLAENAE-KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESAR 708 (786)
Q Consensus 630 fGl~~~~~~~~-~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (786)
||++....... ......++..|+|||.+....|+.++||||+||++|||++|++||...........+.. ..
T Consensus 157 FG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~---~~---- 229 (444)
T 3soa_A 157 FGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKA---GA---- 229 (444)
T ss_dssp CSSCBCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH---TC----
T ss_pred CceeEEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHh---CC----
Confidence 99996554322 22345678899999999888899999999999999999999999977654443332221 10
Q ss_pred cccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 709 RSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 709 ~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
.....+. .......+.+++.+||+.||++|||+.|+++|+|+...
T Consensus 230 ~~~~~~~-----~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~~ 274 (444)
T 3soa_A 230 YDFPSPE-----WDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHR 274 (444)
T ss_dssp CCCCTTT-----TTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTHHH
T ss_pred CCCCccc-----cccCCHHHHHHHHHHcCCChhHCCCHHHHhcCccccCC
Confidence 0111111 01112356688889999999999999999999998654
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-40 Score=347.03 Aligned_cols=258 Identities=15% Similarity=0.188 Sum_probs=209.7
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
++|...+.||+|+||.||+|+.. ++..||+|++........+.|.+|++++++++||||+++++++.. .+..
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------~~~~ 81 (277)
T 3f3z_A 9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFED-------NTDI 81 (277)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-------SSEE
T ss_pred hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEec-------CCeE
Confidence 45788899999999999999965 578999999987666667889999999999999999999999865 4568
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceee---cCCCcccccCCCc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL---DQNLVAKISSYNL 632 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILl---d~~~~~kl~DfGl 632 (786)
++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+
T Consensus 82 ~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~ 155 (277)
T 3f3z_A 82 YLVMELCTGGELFERVVHK---RVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGL 155 (277)
T ss_dssp EEEEECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTT
T ss_pred EEEEeccCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEeccc
Confidence 9999999999999998753 3589999999999999999999997 99999999999999 8889999999999
Q ss_pred ccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
+.............++..|+|||... +.++.++||||||+++|||++|+.||...........+.. .. ...
T Consensus 156 ~~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~---~~----~~~- 226 (277)
T 3f3z_A 156 AARFKPGKMMRTKVGTPYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIRE---GT----FTF- 226 (277)
T ss_dssp CEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---CC----CCC-
T ss_pred ceeccCccchhccCCCCCccChHHhc-ccCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHh---CC----CCC-
Confidence 87655444444556788899999875 4589999999999999999999999976554333222211 00 000
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~ 760 (786)
...... .....+.+++.+||+.||++|||+.|+++|.||.+...
T Consensus 227 ~~~~~~----~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 270 (277)
T 3f3z_A 227 PEKDWL----NVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLS 270 (277)
T ss_dssp CHHHHT----TSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHHHC
T ss_pred Cchhhh----cCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcccc
Confidence 000000 11235678888999999999999999999999987544
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-41 Score=359.57 Aligned_cols=255 Identities=18% Similarity=0.266 Sum_probs=205.9
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
.++|...+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|+++++.++|||||++++++..
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~------- 80 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITT------- 80 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEEC-------
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-------
Confidence 35688899999999999999996 579999999987532 2334679999999999999999999999875
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
.+..++||||+ +|+|.+++... ..+++.....++.|++.||.|||+. +|+||||||+|||+++++.+||+|||
T Consensus 81 ~~~~~lv~E~~-~g~l~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG 153 (336)
T 3h4j_B 81 PTDIVMVIEYA-GGELFDYIVEK---KRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFG 153 (336)
T ss_dssp SSEEEEEECCC-CEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSS
T ss_pred CCEEEEEEECC-CCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEec
Confidence 45689999999 68999988753 3589999999999999999999997 99999999999999999999999999
Q ss_pred cccccccccccccccccccccCccccccCCC-CcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 632 LPLLAENAEKVGHVIPYSGSIDPTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 632 l~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~-t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
++.............++..|+|||.+.+..+ +.++|||||||++|||++|+.||.......+.. ....
T Consensus 154 ~s~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~-----------~i~~ 222 (336)
T 3h4j_B 154 LSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK-----------KVNS 222 (336)
T ss_dssp CTBTTTTSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBC-----------CCCS
T ss_pred cceeccCCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHH-----------HHHc
Confidence 9976655544455678889999999877665 789999999999999999999997543211100 0000
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~ 760 (786)
. ....+ ......+.+++.+||+.||.+|||+.|+++|+||....+
T Consensus 223 ~-~~~~p----~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~~ 267 (336)
T 3h4j_B 223 C-VYVMP----DFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVNLP 267 (336)
T ss_dssp S-CCCCC----TTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHTTCC
T ss_pred C-CCCCc----ccCCHHHHHHHHHHcCCChhHCcCHHHHHhChhhccCCc
Confidence 0 00111 112235668888999999999999999999999976433
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-40 Score=370.86 Aligned_cols=253 Identities=20% Similarity=0.320 Sum_probs=208.4
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|...+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+++++.++||||+++++++.. .
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~-------~ 88 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIST-------P 88 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEEC-------S
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-------C
Confidence 56788899999999999999965 79999999997542 2345679999999999999999999999865 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..++||||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 89 ~~~~lv~E~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~ 162 (476)
T 2y94_A 89 SDIFMVMEYVSGGELFDYICKN---GRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGL 162 (476)
T ss_dssp SEEEEEEECCSSEEHHHHTTSS---SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSS
T ss_pred CEEEEEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccc
Confidence 5789999999999999999753 3689999999999999999999997 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCccccccCCC-CcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~-t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
+.............++..|+|||.+....+ +.++|||||||++|||++|+.||.......+...+.. .. .
T Consensus 163 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~----~~-----~ 233 (476)
T 2y94_A 163 SNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICD----GI-----F 233 (476)
T ss_dssp CEECCTTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHT----TC-----C
T ss_pred hhhccccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhc----CC-----c
Confidence 976655444455678889999999877665 6899999999999999999999987654333222111 00 0
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
..| ... ...+.+++.+||+.||++|||+.||++|+|+.+.
T Consensus 234 ~~p---~~~----s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~ 273 (476)
T 2y94_A 234 YTP---QYL----NPSVISLLKHMLQVDPMKRATIKDIREHEWFKQD 273 (476)
T ss_dssp CCC---TTC----CHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTT
T ss_pred CCC---ccC----CHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhhc
Confidence 001 111 1346678889999999999999999999998764
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-40 Score=362.20 Aligned_cols=262 Identities=22% Similarity=0.363 Sum_probs=205.9
Q ss_pred hcCCCccCccCCCCCceeEEEEec------CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeecccc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFD 548 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~ 548 (786)
.++|...+.||+|+||+||+|++. ++..||||+++.... .....|.+|+.++++++|||||++++++..
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~---- 145 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ---- 145 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS----
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEec----
Confidence 356778899999999999999853 467899999975432 234579999999999999999999999864
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCC----CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC-
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGH----AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL- 623 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~----~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~- 623 (786)
....++||||+++|+|.+++.... ....+++..++.++.|+++||+|||+. +|+||||||+|||++.++
T Consensus 146 ---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~ 219 (367)
T 3l9p_A 146 ---SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGP 219 (367)
T ss_dssp ---SSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSST
T ss_pred ---CCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCC
Confidence 345799999999999999997532 124589999999999999999999998 999999999999999554
Q ss_pred --cccccCCCcccccccc---cccccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHH
Q 003926 624 --VAKISSYNLPLLAENA---EKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQL 697 (786)
Q Consensus 624 --~~kl~DfGl~~~~~~~---~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~ 697 (786)
.+||+|||+++..... .......++..|+|||.+....++.++|||||||++|||+| |++||.......+...+
T Consensus 220 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i 299 (367)
T 3l9p_A 220 GRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 299 (367)
T ss_dssp TCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH
T ss_pred CceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 5999999998644222 12223445678999999988899999999999999999998 99999876554433322
Q ss_pred HHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhhhh
Q 003926 698 QAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDA 762 (786)
Q Consensus 698 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~~~ 762 (786)
.. .. .+.....++ ..+.+++.+||+.||++|||+.||+++++...+....
T Consensus 300 ~~---~~--------~~~~~~~~~----~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~~ 349 (367)
T 3l9p_A 300 TS---GG--------RMDPPKNCP----GPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 349 (367)
T ss_dssp HT---TC--------CCCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHHH
T ss_pred Hc---CC--------CCCCCccCC----HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChhh
Confidence 11 10 011111222 3467888899999999999999999999987664433
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-41 Score=368.38 Aligned_cols=255 Identities=18% Similarity=0.354 Sum_probs=203.2
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
.++|...+.||+|+||.||+|+.. +++.||||+++..... ..++|.+|+++|++++|||||+++|+|.. .+
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-------~~ 185 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ-------KQ 185 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECS-------SS
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEec-------CC
Confidence 456778899999999999999976 7899999998754321 23568999999999999999999999864 35
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 186 ~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s 260 (377)
T 3cbl_A 186 PIYIVMELVQGGDFLTFLRTE--GARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMS 260 (377)
T ss_dssp SCEEEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGC
T ss_pred CcEEEEEcCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCc
Confidence 689999999999999999753 23589999999999999999999997 9999999999999999999999999998
Q ss_pred ccccccccc---ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 634 LLAENAEKV---GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 634 ~~~~~~~~~---~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
+........ ....++..|+|||.+..+.++.++|||||||++|||+| |+.|+...........+.. . .
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~----~--~-- 332 (377)
T 3cbl_A 261 REEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEK----G--G-- 332 (377)
T ss_dssp EECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHT----T--C--
T ss_pred eecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc----C--C--
Confidence 654322111 11123456999999988889999999999999999999 9999977654443322211 0 0
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
. ...+..++ ..+.+++.+||+.||++|||+.||++.|....
T Consensus 333 ~---~~~~~~~~----~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~ 373 (377)
T 3cbl_A 333 R---LPCPELCP----DAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373 (377)
T ss_dssp C---CCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred C---CCCCCCCC----HHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 0 01111222 35667888999999999999999999997543
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-40 Score=351.54 Aligned_cols=263 Identities=21% Similarity=0.369 Sum_probs=198.3
Q ss_pred hcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhc--CCCCCcceeeeeeeeccccCCCCc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISK--LRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~--l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
.++|+..+.||+|+||+||+|+. +|+.||||++... ....+.+|.+++.. ++||||+++++++..... ...
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~---~~~ 79 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRH---SST 79 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEET---TEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccC---CCc
Confidence 45788899999999999999988 5899999998653 34567777777766 899999999999865322 235
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCC-----CCCccccCCCCCceeecCCCccccc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI-----VPGVFSNNLKITDILLDQNLVAKIS 628 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~-----~~~ivHrdlk~~NILld~~~~~kl~ 628 (786)
..++||||+++|+|.++++. ..+++..++.++.|++.||+|||... ..+|+||||||+|||++.++.+||+
T Consensus 80 ~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 155 (301)
T 3q4u_A 80 QLWLITHYHEMGSLYDYLQL----TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIA 155 (301)
T ss_dssp EEEEEECCCTTCBHHHHHTT----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEEC
T ss_pred eeEEehhhccCCCHHHHHhh----cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEe
Confidence 68999999999999999964 35899999999999999999999211 2399999999999999999999999
Q ss_pred CCCcccccccccc-----cccccccccccCccccccC------CCCcccceeehhHHHHHHHhC----------CCCCCC
Q 003926 629 SYNLPLLAENAEK-----VGHVIPYSGSIDPTNSARG------KLEEKIDIYDFGLILLEIIVG----------RPLKSR 687 (786)
Q Consensus 629 DfGl~~~~~~~~~-----~~~~~~~~~~~aPe~~~~~------~~t~ksDVwSfGvvl~ElltG----------~~p~~~ 687 (786)
|||+++....... .....++..|+|||.+... .++.++|||||||++|||+|| ++||..
T Consensus 156 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~ 235 (301)
T 3q4u_A 156 DLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYD 235 (301)
T ss_dssp CCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred eCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccc
Confidence 9999865533221 1223578889999998765 455799999999999999999 778754
Q ss_pred chh-HHHHHHHHHHHHhccccccccccccccc-cCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 688 KEV-DLLKNQLQAVVTADESARRSMVDPAVNK-ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 688 ~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
... ......+....... ...+.... .........+.+++.+||+.||++|||+.||++.|..
T Consensus 236 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~ 299 (301)
T 3q4u_A 236 VVPNDPSFEDMRKVVCVD------QQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK 299 (301)
T ss_dssp TSCSSCCHHHHHHHHTTS------CCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred cCCCCcchhhhhHHHhcc------CCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhc
Confidence 211 10111111111111 01111111 1223456678899999999999999999999999863
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-40 Score=355.80 Aligned_cols=267 Identities=17% Similarity=0.290 Sum_probs=202.9
Q ss_pred hcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
.++|+..+.||+|+||+||+|+.. ++.||||++.... .....+.+|+.++++++|||||++++++.... ......
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~---~~~~~~ 97 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGT---SVDVDL 97 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC---SSSEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCC---CCCceE
Confidence 456888999999999999999876 7899999997543 22345677999999999999999999987532 113457
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCC-------CCCccccCCCCCceeecCCCccccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI-------VPGVFSNNLKITDILLDQNLVAKIS 628 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~-------~~~ivHrdlk~~NILld~~~~~kl~ 628 (786)
++||||+++|+|.+++... .++|..+..++.|+++||+|||+.+ .++|+||||||+|||++.++.+||+
T Consensus 98 ~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~ 173 (322)
T 3soc_A 98 WLITAFHEKGSLSDFLKAN----VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIA 173 (322)
T ss_dssp EEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEEC
T ss_pred EEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEc
Confidence 9999999999999999763 4899999999999999999999852 3489999999999999999999999
Q ss_pred CCCcccccccccc---cccccccccccCccccccC-----CCCcccceeehhHHHHHHHhCCCCCCCchhH---------
Q 003926 629 SYNLPLLAENAEK---VGHVIPYSGSIDPTNSARG-----KLEEKIDIYDFGLILLEIIVGRPLKSRKEVD--------- 691 (786)
Q Consensus 629 DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~-----~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~--------- 691 (786)
|||+++....... .....++..|+|||.+... .++.++|||||||++|||+||++||......
T Consensus 174 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 253 (322)
T 3soc_A 174 DFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEI 253 (322)
T ss_dssp CCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHH
T ss_pred cCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhh
Confidence 9999965543221 2234578889999988652 4567899999999999999999998643210
Q ss_pred ----HHHHHHHHHHHhcccccccccccccccc-CcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 692 ----LLKNQLQAVVTADESARRSMVDPAVNKA-CLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 692 ----~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
......... . .....+..... ........+.+++.+||+.||++|||+.||++.|+..+.
T Consensus 254 ~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 318 (322)
T 3soc_A 254 GQHPSLEDMQEVV-V------HKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318 (322)
T ss_dssp CSSCCHHHHHHHH-T------TSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ccCCchhhhhhhh-h------cccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 001111100 0 00111111111 112345568889999999999999999999999985543
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-41 Score=361.48 Aligned_cols=255 Identities=22% Similarity=0.350 Sum_probs=207.8
Q ss_pred HHhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcC-CCCCcceeeeeeeecccc
Q 003926 474 EATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFD 548 (786)
Q Consensus 474 ~~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~ 548 (786)
...++|...+.||+|+||.||+|+.+ +|+.||||+++... ....+.+.+|.++++++ +|||||++++++..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~---- 89 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQT---- 89 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEEC----
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEe----
Confidence 34578889999999999999999975 68999999997542 23456788999999886 99999999998864
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCccccc
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKIS 628 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~ 628 (786)
.+..|+||||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+
T Consensus 90 ---~~~~~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~ 160 (345)
T 1xjd_A 90 ---KENLFFVMEYLNGGDLMYHIQSC---HKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIA 160 (345)
T ss_dssp ---SSEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEEC
T ss_pred ---CCEEEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEe
Confidence 45789999999999999999753 3589999999999999999999998 99999999999999999999999
Q ss_pred CCCccccccc-ccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccc
Q 003926 629 SYNLPLLAEN-AEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESA 707 (786)
Q Consensus 629 DfGl~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (786)
|||+++.... ........++..|+|||.+....++.++|||||||++|||++|++||...+...+...+. ...
T Consensus 161 DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~---~~~--- 234 (345)
T 1xjd_A 161 DFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIR---MDN--- 234 (345)
T ss_dssp CCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---HCC---
T ss_pred EChhhhhcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH---hCC---
Confidence 9999865422 223344567889999999988889999999999999999999999998765443332221 111
Q ss_pred ccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHH-HHHHHHHHHH
Q 003926 708 RRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVE-DVLWNLQFAA 757 (786)
Q Consensus 708 ~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~-evl~~l~~~~ 757 (786)
+..+... ...+.+++.+||+.||++||++. ||++|+||..
T Consensus 235 ------~~~p~~~----s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~~ 275 (345)
T 1xjd_A 235 ------PFYPRWL----EKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFRE 275 (345)
T ss_dssp ------CCCCTTS----CHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTT
T ss_pred ------CCCCccc----CHHHHHHHHHHhcCCHhHcCCChHHHHcCccccC
Confidence 1111111 23566788899999999999998 9999999865
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-41 Score=359.62 Aligned_cols=249 Identities=18% Similarity=0.175 Sum_probs=193.5
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC--ChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|+..+.||+|+||+||+|+.. +|+.||||++...... ....+.+|+..+.++ +|||||+++++|.+ .
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~-------~ 129 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEE-------G 129 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-------T
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEe-------C
Confidence 56888999999999999999976 7999999998754332 234566677666665 99999999999875 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..++||||+ +|+|.+++.... ..++|..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 130 ~~~~lv~e~~-~~~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~ 203 (311)
T 3p1a_A 130 GILYLQTELC-GPSLQQHCEAWG--ASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGL 203 (311)
T ss_dssp TEEEEEEECC-CCBHHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTT
T ss_pred CEEEEEEecc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEcccee
Confidence 6789999999 679999887532 4699999999999999999999997 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
+.............++..|+|||.+.+ .++.++|||||||++|||++|..|+...... . .... ...
T Consensus 204 a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~--~----~~~~-------~~~ 269 (311)
T 3p1a_A 204 LVELGTAGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGW--Q----QLRQ-------GYL 269 (311)
T ss_dssp CEECC------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHH--H----HHTT-------TCC
T ss_pred eeecccCCCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHH--H----HHhc-------cCC
Confidence 876544433444567889999998764 7999999999999999999997665433211 0 0000 011
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
.+..... ....+.+++.+||+.||++|||+.|+++|+|+.
T Consensus 270 ~~~~~~~----~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~ 309 (311)
T 3p1a_A 270 PPEFTAG----LSSELRSVLVMMLEPDPKLRATAEALLALPVLR 309 (311)
T ss_dssp CHHHHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGS
T ss_pred CcccccC----CCHHHHHHHHHHcCCChhhCcCHHHHHhCcccc
Confidence 1111111 224567888899999999999999999998864
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-40 Score=356.89 Aligned_cols=250 Identities=16% Similarity=0.242 Sum_probs=206.8
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|+..+.||+|+||.||+|+.. +|+.||||+++... ....+.+.+|++++++++|||||++++++.. .
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------~ 113 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD-------N 113 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-------S
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc-------C
Confidence 56888899999999999999965 69999999997542 2445789999999999999999999998864 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..|+||||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 114 ~~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~ 187 (350)
T 1rdq_E 114 SNLYMVMEYVAGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGF 187 (350)
T ss_dssp SEEEEEEECCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEcCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEccccc
Confidence 5789999999999999999753 3589999999999999999999997 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
++..... .....++..|+|||.+....++.++|||||||++|||++|++||...........+. ...
T Consensus 188 a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~---~~~-------- 254 (350)
T 1rdq_E 188 AKRVKGR--TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV---SGK-------- 254 (350)
T ss_dssp CEECSSC--BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---HCC--------
T ss_pred ceeccCC--cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHH---cCC--------
Confidence 8755432 234567889999999988889999999999999999999999997655443322221 110
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCC-----HHHHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPS-----VEDVLWNLQFAA 757 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt-----~~evl~~l~~~~ 757 (786)
...+... ...+.+++.+||+.||++||+ +.||++|+||..
T Consensus 255 -~~~p~~~----~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~ 299 (350)
T 1rdq_E 255 -VRFPSHF----SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFAT 299 (350)
T ss_dssp -CCCCTTC----CHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTT
T ss_pred -CCCCCCC----CHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCC
Confidence 0111111 235668888999999999998 999999999875
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-40 Score=373.65 Aligned_cols=254 Identities=17% Similarity=0.272 Sum_probs=198.7
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
.++|+..+.||+|+||.||+|+.. +|+.||||+++... ......+.+|++++++++|||||++++++..
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~------- 219 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT------- 219 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEE-------
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEee-------
Confidence 467888999999999999999954 69999999997542 2334668899999999999999999999875
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhc-CCCCCccccCCCCCceeecCCCcccccCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHT-GIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~-~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
.+..++|||||++|+|.+++... ..+++.....++.|++.||+|||+ . +|+||||||+|||++.++.+||+||
T Consensus 220 ~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DF 293 (446)
T 4ejn_A 220 HDRLCFVMEYANGGELFFHLSRE---RVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDF 293 (446)
T ss_dssp TTEEEEEECCCSSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCC
T ss_pred CCEEEEEEeeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccC
Confidence 45689999999999999999753 368999999999999999999997 6 8999999999999999999999999
Q ss_pred Ccccccc-cccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 631 NLPLLAE-NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 631 Gl~~~~~-~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
|+++... .........++..|+|||.+....|+.++|||||||++|||++|+.||...........+. ...
T Consensus 294 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~---~~~----- 365 (446)
T 4ejn_A 294 GLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL---MEE----- 365 (446)
T ss_dssp CCCCTTCC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---HCC-----
T ss_pred CCceeccCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHH---hCC-----
Confidence 9986532 2223345568889999999988899999999999999999999999997765443332221 111
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERP-----SVEDVLWNLQFAAQ 758 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~~l~~~~~ 758 (786)
...+... ...+.+++.+||+.||++|| ++.|+++|+||...
T Consensus 366 ----~~~p~~~----~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~ 411 (446)
T 4ejn_A 366 ----IRFPRTL----GPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGI 411 (446)
T ss_dssp ----CCCCTTS----CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred ----CCCCccC----CHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCC
Confidence 0011111 23566888899999999999 99999999998754
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-40 Score=357.43 Aligned_cols=253 Identities=20% Similarity=0.297 Sum_probs=207.2
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~ 550 (786)
.++|+..+.||+|+||.||+|+.+ +|+.||||+++... ....+.+.+|..+++.+ +||||+++++++..
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~------ 92 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT------ 92 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEEC------
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEc------
Confidence 467889999999999999999976 48899999997542 24457789999999998 89999999998764
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
.+..|+||||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 93 -~~~~~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DF 165 (353)
T 2i0e_A 93 -MDRLYFVMEYVNGGDLMYHIQQV---GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADF 165 (353)
T ss_dssp -SSEEEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCC
T ss_pred -CCEEEEEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeC
Confidence 45789999999999999999753 3589999999999999999999997 9999999999999999999999999
Q ss_pred Ccccccc-cccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 631 NLPLLAE-NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 631 Gl~~~~~-~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
|+++... .........++..|+|||.+....++.++|||||||++|||++|++||.......+...+. ...
T Consensus 166 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~---~~~----- 237 (353)
T 2i0e_A 166 GMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM---EHN----- 237 (353)
T ss_dssp TTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---HCC-----
T ss_pred CcccccccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHH---hCC-----
Confidence 9987532 2223345568889999999988889999999999999999999999998765443332221 111
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCC-----HHHHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPS-----VEDVLWNLQFAA 757 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt-----~~evl~~l~~~~ 757 (786)
...+.. ....+.+++.+||+.||++||+ +.||++|+||..
T Consensus 238 ----~~~p~~----~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~ 282 (353)
T 2i0e_A 238 ----VAYPKS----MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY 282 (353)
T ss_dssp ----CCCCTT----SCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTT
T ss_pred ----CCCCCC----CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccC
Confidence 011111 1235668888999999999995 699999999864
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-40 Score=369.36 Aligned_cols=252 Identities=21% Similarity=0.379 Sum_probs=202.8
Q ss_pred hcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
.++|+..+.||+|+||.||+|... |+.||||+++... ..+.|.+|+++|++++|||||+++|+|.+. ....
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~~~ 262 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEE------KGGL 262 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECT------TSCE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcC------CCce
Confidence 456778899999999999999986 7899999997643 467899999999999999999999998651 2358
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
++|||||++|+|.+++.... ...+++..++.++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 263 ~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~ 338 (450)
T 1k9a_A 263 YIVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKE 338 (450)
T ss_dssp EEEEECCTTCBHHHHHHHHC-TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEecCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccc
Confidence 99999999999999998632 23479999999999999999999998 999999999999999999999999999875
Q ss_pred cccccccccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccccccccccc
Q 003926 636 AENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMVDP 714 (786)
Q Consensus 636 ~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 714 (786)
..... ....++..|+|||.+....++.++|||||||++|||+| |+.||.......+...+.. . . .+
T Consensus 339 ~~~~~--~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~----~---~----~~ 405 (450)
T 1k9a_A 339 ASSTQ--DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK----G---Y----KM 405 (450)
T ss_dssp CC--------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHT----T---C----CC
T ss_pred ccccc--cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc----C---C----CC
Confidence 43222 12244567999999988899999999999999999999 9999976544433322211 0 0 01
Q ss_pred cccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 715 AVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 715 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
..+..++ ..+.+++.+||+.||++|||+.|+++.|+...
T Consensus 406 ~~p~~~~----~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~ 444 (450)
T 1k9a_A 406 DAPDGCP----PAVYDVMKNCWHLDAATRPTFLQLREQLEHIR 444 (450)
T ss_dssp CCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCcCC----HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 1112222 35678888999999999999999999887443
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-40 Score=355.71 Aligned_cols=256 Identities=20% Similarity=0.359 Sum_probs=199.6
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcE----EEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTF----VAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~----vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
++|...+.||+|+||+||+|+.. +++. ||+|.+..... ...+.+.+|+.++++++|||||+++++|..
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------ 86 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG------ 86 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB------
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC------
Confidence 45778899999999999999964 4543 88888764432 334678899999999999999999998753
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
+..++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 87 --~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Df 159 (325)
T 3kex_A 87 --SSLQLVTQYLPLGSLLDHVRQH--RGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADF 159 (325)
T ss_dssp --SSEEEEEECCTTCBSHHHHHSS--GGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSC
T ss_pred --CccEEEEEeCCCCCHHHHHHHc--cccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCC
Confidence 4589999999999999999763 23688999999999999999999998 9999999999999999999999999
Q ss_pred Ccccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccc
Q 003926 631 NLPLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADES 706 (786)
Q Consensus 631 Gl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (786)
|+++....... .....++..|+|||.+..+.++.++|||||||++|||+| |+.||...........+.. ..
T Consensus 160 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~---~~-- 234 (325)
T 3kex_A 160 GVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEK---GE-- 234 (325)
T ss_dssp SGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHT---TC--
T ss_pred CcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHc---CC--
Confidence 99976543221 223345568999999988899999999999999999999 9999976554433322211 00
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~ 760 (786)
....+. .++ ..+.+++.+||+.||++|||+.|+++++.......
T Consensus 235 ---~~~~~~---~~~----~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~ 278 (325)
T 3kex_A 235 ---RLAQPQ---ICT----IDVYMVMVKCWMIDENIRPTFKELANEFTRMARDP 278 (325)
T ss_dssp ---BCCCCT---TBC----TTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSH
T ss_pred ---CCCCCC---cCc----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 000111 111 23557888999999999999999999997654433
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-40 Score=359.70 Aligned_cols=257 Identities=18% Similarity=0.277 Sum_probs=190.4
Q ss_pred HhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
..+.|+..+.||+|+||.||+|+.. +++.||||+++... ..+.+.+|++++++++|||||++++++.. .+
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~-------~~ 121 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFET-------PT 121 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEEC-------SS
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEec-------CC
Confidence 3567888999999999999999976 58899999997543 34678899999999999999999999865 45
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC---CCcccccCC
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ---NLVAKISSY 630 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~---~~~~kl~Df 630 (786)
..++||||+++|+|.+++... ..+++.....++.|+++||.|||+. +|+||||||+|||++. ++.+||+||
T Consensus 122 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Df 195 (349)
T 2w4o_A 122 EISLVLELVTGGELFDRIVEK---GYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADF 195 (349)
T ss_dssp EEEEEECCCCSCBHHHHHTTC---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCC
T ss_pred eEEEEEEeCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccC
Confidence 689999999999999999753 3589999999999999999999997 9999999999999975 889999999
Q ss_pred CcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 631 NLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 631 Gl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
|+++............++..|+|||.+....++.++|||||||++|||++|+.||........ ......... ..
T Consensus 196 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--~~~~i~~~~----~~ 269 (349)
T 2w4o_A 196 GLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQF--MFRRILNCE----YY 269 (349)
T ss_dssp C----------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHH--HHHHHHTTC----CC
T ss_pred ccccccCcccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHH--HHHHHHhCC----Cc
Confidence 998766544333445678899999999888899999999999999999999999865433221 111111110 00
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
...+ ........+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 270 ~~~~-----~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~ 311 (349)
T 2w4o_A 270 FISP-----WWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTG 311 (349)
T ss_dssp CCTT-----TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTS
T ss_pred cCCc-----hhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcccCC
Confidence 0111 11122235678888999999999999999999988653
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-41 Score=355.40 Aligned_cols=259 Identities=19% Similarity=0.354 Sum_probs=199.1
Q ss_pred cCCCccCccCCCCCceeEEEEe-----cCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-----KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
++|+..+.||+|+||+||+|++ .+++.||||++........+.|.+|++++++++||||++++++|....
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----- 84 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG----- 84 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHH-----
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC-----
Confidence 4577889999999999999985 268999999998655444578999999999999999999999886421
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
....++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 85 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg 159 (295)
T 3ugc_A 85 RRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFG 159 (295)
T ss_dssp HTSCEEEEECCTTCBHHHHHHHCG--GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCC
T ss_pred CCceEEEEEeCCCCCHHHHHHhcc--cccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCc
Confidence 235799999999999999997642 3589999999999999999999997 99999999999999999999999999
Q ss_pred cccccccccc----cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHH------------
Q 003926 632 LPLLAENAEK----VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKN------------ 695 (786)
Q Consensus 632 l~~~~~~~~~----~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~------------ 695 (786)
++........ .....++..|+|||.+....++.++||||||+++|||+||..|+..........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (295)
T 3ugc_A 160 LTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 239 (295)
T ss_dssp SCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHH
T ss_pred ccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHH
Confidence 9876533221 112234456999999988899999999999999999999999886533221110
Q ss_pred HHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 696 QLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 696 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
.+...... .........+ ...+.+++.+||+.||++|||+.|+++++...
T Consensus 240 ~~~~~~~~-------~~~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l 289 (295)
T 3ugc_A 240 HLIELLKN-------NGRLPRPDGC----PDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 289 (295)
T ss_dssp HHHHHHHT-------TCCCCCCTTC----CHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHhc-------cCcCCCCcCc----CHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 00000000 0001111122 24577888999999999999999999999744
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-40 Score=355.50 Aligned_cols=253 Identities=15% Similarity=0.252 Sum_probs=196.6
Q ss_pred hcCCCccCccCCCCCceeEEEEe----cCCcEEEEEEecccCC----CChHHHHHHHHHHhcCCCCCcceeeeeeeeccc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL----KNGTFVAIRCLKMKKC----HSTRNFMHHIELISKLRHRHLVSALGHCFECYF 547 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~----~~g~~vAvK~l~~~~~----~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~ 547 (786)
.++|+..+.||+|+||.||+|+. .+|+.||||+++.... .....+.+|++++++++|||||++++++..
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--- 92 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQT--- 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEEC---
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEc---
Confidence 35688899999999999999986 4789999999976532 234568899999999999999999998865
Q ss_pred cCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccc
Q 003926 548 DDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKI 627 (786)
Q Consensus 548 ~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl 627 (786)
.+..|+||||+++|+|.+++... ..+++.....++.|++.||.|||+. +|+||||||+|||++.++.+||
T Consensus 93 ----~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl 162 (327)
T 3a62_A 93 ----GGKLYLILEYLSGGELFMQLERE---GIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKL 162 (327)
T ss_dssp ----SSCEEEEEECCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEE
T ss_pred ----CCEEEEEEeCCCCCcHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEE
Confidence 45689999999999999999753 3588999999999999999999997 9999999999999999999999
Q ss_pred cCCCccccccc-ccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccc
Q 003926 628 SSYNLPLLAEN-AEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADES 706 (786)
Q Consensus 628 ~DfGl~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (786)
+|||+++.... ........++..|+|||.+....++.++|||||||++|||++|++||...........+. ...
T Consensus 163 ~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~---~~~-- 237 (327)
T 3a62_A 163 TDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKIL---KCK-- 237 (327)
T ss_dssp CCCSCC----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH---HTC--
T ss_pred EeCCcccccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHH---hCC--
Confidence 99999864322 222234467889999999988889999999999999999999999998655433322211 111
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHHHHHHH
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERP-----SVEDVLWNLQFAA 757 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~~l~~~~ 757 (786)
...+... ...+.+++.+||+.||++|| ++.|+++|+||..
T Consensus 238 -------~~~p~~~----~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~ 282 (327)
T 3a62_A 238 -------LNLPPYL----TQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRH 282 (327)
T ss_dssp -------CCCCTTS----CHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSS
T ss_pred -------CCCCCCC----CHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccC
Confidence 0011111 23566788899999999999 8899999999864
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=347.93 Aligned_cols=254 Identities=20% Similarity=0.370 Sum_probs=194.8
Q ss_pred cCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~ 556 (786)
++|+..+.||+|+||+||+|+.. ++.||||++... ...+.|.+|++++++++|||||+++|++.+ ..+
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~---------~~~ 75 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN---------PVC 75 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT---------TTE
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC---------CcE
Confidence 45777899999999999999975 788999998643 345789999999999999999999998752 368
Q ss_pred EEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCc-ccccCCCcccc
Q 003926 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV-AKISSYNLPLL 635 (786)
Q Consensus 557 LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~-~kl~DfGl~~~ 635 (786)
+||||+++|+|.+++........+++...+.++.|+++||+|||+....+|+||||||+||+++.++. +||+|||++..
T Consensus 76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~ 155 (307)
T 2eva_A 76 LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD 155 (307)
T ss_dssp EEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---
T ss_pred EEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccc
Confidence 99999999999999986543345789999999999999999999943348999999999999998876 79999999865
Q ss_pred cccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccccccc
Q 003926 636 AENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPA 715 (786)
Q Consensus 636 ~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 715 (786)
.... .....++..|+|||......++.++|||||||++|||+||+.||......... .... .... . .+.
T Consensus 156 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~-~~~~-~~~~--~-----~~~ 224 (307)
T 2eva_A 156 IQTH--MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR-IMWA-VHNG--T-----RPP 224 (307)
T ss_dssp -----------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHH-HHHH-HHTT--C-----CCC
T ss_pred cccc--cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHH-HHHH-HhcC--C-----CCC
Confidence 4322 12335678899999998888999999999999999999999999753322111 1111 1110 0 111
Q ss_pred ccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 716 VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 716 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
....++ ..+.+++.+||+.||++|||+.|+++++....
T Consensus 225 ~~~~~~----~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 262 (307)
T 2eva_A 225 LIKNLP----KPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM 262 (307)
T ss_dssp CBTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHG
T ss_pred cccccC----HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 111222 35667888999999999999999999997543
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-40 Score=377.00 Aligned_cols=260 Identities=19% Similarity=0.286 Sum_probs=209.8
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
.++|+..+.||+|+||.||+|+.+ +|+.||||++.... ......+.+|+++|++++|||||++++++..
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~------- 255 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYET------- 255 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-------
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEee-------
Confidence 466888999999999999999975 79999999997542 2345678999999999999999999998764
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
.+..|+|||||++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 256 ~~~l~lVmEy~~gg~L~~~l~~~~-~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFG 331 (576)
T 2acx_A 256 KDALCLVLTLMNGGDLKFHIYHMG-QAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLG 331 (576)
T ss_dssp SSEEEEEECCCCSCBHHHHHHSSS-SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEEcCCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecc
Confidence 457899999999999999997642 23589999999999999999999998 99999999999999999999999999
Q ss_pred cccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 632 LPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 632 l~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
+++............++..|+|||.+....|+.++|||||||++|||++|++||...........+........
T Consensus 332 la~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~------ 405 (576)
T 2acx_A 332 LAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP------ 405 (576)
T ss_dssp TCEECCTTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCC------
T ss_pred cceecccCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhccc------
Confidence 99766544444455788999999999888899999999999999999999999976432111111111111111
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERP-----SVEDVLWNLQFAAQ 758 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~~l~~~~~ 758 (786)
..... .....+.+++.+||+.||++|| ++.||++|+||...
T Consensus 406 --~~~p~----~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i 451 (576)
T 2acx_A 406 --EEYSE----RFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKL 451 (576)
T ss_dssp --CCCCT----TSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTC
T ss_pred --ccCCc----cCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccC
Confidence 01111 1123567888899999999999 78999999998753
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-40 Score=362.62 Aligned_cols=267 Identities=21% Similarity=0.341 Sum_probs=208.5
Q ss_pred cCHHHHHHHhcCCCccCccCCCCCceeEEEEe------cCCcEEEEEEecccCCC-ChHHHHHHHHHHhcC-CCCCccee
Q 003926 467 FSLEELEEATNNFDTSAFMGEGSQGQMYRGRL------KNGTFVAIRCLKMKKCH-STRNFMHHIELISKL-RHRHLVSA 538 (786)
Q Consensus 467 ~~~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l-~H~NIv~l 538 (786)
+...+++...++|+..+.||+|+||.||+|++ .+++.||||+++..... ..+.|.+|+++++++ +|||||++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 44556666788899999999999999999974 24689999999764332 246799999999999 89999999
Q ss_pred eeeeeeccccCCCCceEEEEEecCCCCChhHHhhcCCC------------------------------------------
Q 003926 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHA------------------------------------------ 576 (786)
Q Consensus 539 ~g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~------------------------------------------ 576 (786)
+++|.+. ....++||||+++|+|.+++.....
T Consensus 92 ~~~~~~~------~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (359)
T 3vhe_A 92 LGACTKP------GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASS 165 (359)
T ss_dssp EEEECST------TSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------
T ss_pred eeeeecC------CCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccc
Confidence 9998641 3457999999999999999976432
Q ss_pred ---------------------CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 577 ---------------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 577 ---------------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
...+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 242 (359)
T 3vhe_A 166 GFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARD 242 (359)
T ss_dssp ------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSC
T ss_pred ccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceee
Confidence 11289999999999999999999998 999999999999999999999999999965
Q ss_pred ccccc---ccccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhH-HHHHHHHHHHHhccccccc
Q 003926 636 AENAE---KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVD-LLKNQLQAVVTADESARRS 710 (786)
Q Consensus 636 ~~~~~---~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~ 710 (786)
..... ......++..|+|||.+....++.++|||||||++|||+| |++||...... .....+. ...
T Consensus 243 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~---~~~------ 313 (359)
T 3vhe_A 243 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK---EGT------ 313 (359)
T ss_dssp TTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHH---HTC------
T ss_pred ecccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHH---cCC------
Confidence 43221 1223445678999999988899999999999999999999 99999764422 2211111 110
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.+.....++ ..+.+++.+||+.||++|||+.||++++....
T Consensus 314 --~~~~~~~~~----~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 354 (359)
T 3vhe_A 314 --RMRAPDYTT----PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 354 (359)
T ss_dssp --CCCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --CCCCCCCCC----HHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence 001111122 35678888999999999999999999997543
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-40 Score=345.88 Aligned_cols=253 Identities=21% Similarity=0.325 Sum_probs=202.0
Q ss_pred hcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
.++|+..+.||+|+||.||+|...++..||||+++... ...++|.+|++++++++||||+++++++.. .+..
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------~~~~ 94 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK-------QRPI 94 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECS-------SSSE
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEec-------CCCe
Confidence 45678889999999999999999888899999998654 345789999999999999999999998864 4568
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
++||||+++|+|.+++... ...+++.++..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 95 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 169 (283)
T 3gen_A 95 FIITEYMANGCLLNYLREM--RHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRY 169 (283)
T ss_dssp EEEECCCTTCBHHHHHHCG--GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGG
T ss_pred EEEEeccCCCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccc
Confidence 9999999999999999753 23589999999999999999999997 999999999999999999999999999865
Q ss_pred cccccc--cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 636 AENAEK--VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 636 ~~~~~~--~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
...... .....++..|+|||......++.++||||||+++|||+| |+.||...........+.. .. . ..
T Consensus 170 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~---~~----~-~~ 241 (283)
T 3gen_A 170 VLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ---GL----R-LY 241 (283)
T ss_dssp BCCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHT---TC----C-CC
T ss_pred ccccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhc---cc----C-CC
Confidence 533221 122234557999999988889999999999999999999 9999976554333222211 10 0 00
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
.+ ... ...+.+++.+||+.||++|||+.|+++++...
T Consensus 242 ~~---~~~----~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~ 278 (283)
T 3gen_A 242 RP---HLA----SEKVYTIMYSCWHEKADERPTFKILLSNILDV 278 (283)
T ss_dssp CC---TTC----CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred CC---CcC----CHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence 11 111 13566788899999999999999999999744
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=351.55 Aligned_cols=256 Identities=13% Similarity=0.125 Sum_probs=202.0
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCCCCce
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
++|+..+.||+|+||.||+|+. .+|+.||||++.... ..+.+.+|+++++++ +||||+++++++.. .+.
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-------~~~ 79 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPC-------GKY 79 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEE-------TTE
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEec-------CCc
Confidence 5688889999999999999995 579999999987543 234688999999999 99999999998875 456
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCc-----ccccC
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV-----AKISS 629 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~-----~kl~D 629 (786)
.++||||+ +|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++. +||+|
T Consensus 80 ~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~D 153 (330)
T 2izr_A 80 NAMVLELL-GPSLEDLFDLC--DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIID 153 (330)
T ss_dssp EEEEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECC
T ss_pred cEEEEEeC-CCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEE
Confidence 89999999 99999999863 24699999999999999999999997 9999999999999999887 99999
Q ss_pred CCcccccccccc--------cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHH
Q 003926 630 YNLPLLAENAEK--------VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVV 701 (786)
Q Consensus 630 fGl~~~~~~~~~--------~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~ 701 (786)
||+++....... .....++..|+|||......++.++|||||||++|||++|+.||...........+....
T Consensus 154 Fg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~ 233 (330)
T 2izr_A 154 FALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIG 233 (330)
T ss_dssp CTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHH
T ss_pred cccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHH
Confidence 999975433221 134567889999999988889999999999999999999999997643333222222221
Q ss_pred HhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 702 TADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 702 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
...... ..+.....+ + .+.+++..||+.||.+||++.+|++.+...
T Consensus 234 ~~~~~~----~~~~~~~~~----p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~ 279 (330)
T 2izr_A 234 DTKRAT----PIEVLCENF----P-EMATYLRYVRRLDFFEKPDYDYLRKLFTDL 279 (330)
T ss_dssp HHHHHS----CHHHHTTTC----H-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred hhhccC----CHHHHhccC----h-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence 111000 000001111 1 577888899999999999999999988744
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-40 Score=346.79 Aligned_cols=268 Identities=19% Similarity=0.274 Sum_probs=201.2
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
++|+..+.||+|+||+||+|+.. +|+.||||++...... ..+.+.+|++++++++|||||++++++.. .+
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------~~ 74 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS-------DK 74 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-------TT
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEe-------CC
Confidence 46788899999999999999965 6899999999755432 24678999999999999999999999875 45
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++||||+++ ++.+++... ...+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 75 ~~~lv~e~~~~-~l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~ 148 (292)
T 3o0g_A 75 KLTLVFEFCDQ-DLKKYFDSC--NGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLA 148 (292)
T ss_dssp EEEEEEECCSE-EHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred EEEEEEecCCC-CHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccc
Confidence 78999999986 666665542 23689999999999999999999998 9999999999999999999999999999
Q ss_pred cccccc-cccccccccccccCccccccCC-CCcccceeehhHHHHHHHhCCCC-CCCchhHHHHHHHHHHHH-hcccccc
Q 003926 634 LLAENA-EKVGHVIPYSGSIDPTNSARGK-LEEKIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQAVVT-ADESARR 709 (786)
Q Consensus 634 ~~~~~~-~~~~~~~~~~~~~aPe~~~~~~-~t~ksDVwSfGvvl~ElltG~~p-~~~~~~~~~~~~~~~~~~-~~~~~~~ 709 (786)
+..... .......++..|+|||.+.... ++.++|||||||++|||++|..| +...........+..... .....+.
T Consensus 149 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~ 228 (292)
T 3o0g_A 149 RAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWP 228 (292)
T ss_dssp EECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCT
T ss_pred eecCCccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhh
Confidence 655322 2223445678899999887655 89999999999999999998766 444433332222222111 1111111
Q ss_pred ccc---c----c-----cccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 710 SMV---D----P-----AVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 710 ~~~---d----~-----~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
... + + .............+.+++.+||+.||++|||++|+++|+||..
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~ 288 (292)
T 3o0g_A 229 SMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288 (292)
T ss_dssp TGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred hhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCccccc
Confidence 000 0 0 0000011122345678888999999999999999999998753
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-40 Score=344.64 Aligned_cols=255 Identities=20% Similarity=0.342 Sum_probs=205.0
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
.++|+..+.||+|+||.||+|+.. ++..||||++.... ......+.+|++++++++||||+++++++..
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------- 80 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHD------- 80 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-------
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEec-------
Confidence 467888999999999999999865 57899999986532 2335679999999999999999999999865
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
.+..++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~---~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg 154 (279)
T 3fdn_A 81 ATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 154 (279)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCC
T ss_pred CCEEEEEEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEecc
Confidence 45689999999999999999753 3589999999999999999999997 99999999999999999999999999
Q ss_pred cccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 632 LPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 632 l~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
++....... .....++..|+|||......++.++||||||+++|||++|+.||...........+.. ..
T Consensus 155 ~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---~~------- 223 (279)
T 3fdn_A 155 WSVHAPSSR-RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR---VE------- 223 (279)
T ss_dssp EESCC---------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH---TC-------
T ss_pred ccccCCccc-ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHh---CC-------
Confidence 985443322 2334567889999999888899999999999999999999999987654433222211 00
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~ 760 (786)
...+... ...+.+++.+||+.||++|||+.||++|+|+.....
T Consensus 224 --~~~~~~~----~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~~~ 266 (279)
T 3fdn_A 224 --FTFPDFV----TEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 266 (279)
T ss_dssp --CCCCTTS----CHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHHCS
T ss_pred --CCCCCcC----CHHHHHHHHHHhccChhhCCCHHHHhhCccccCCcc
Confidence 0111111 234567888999999999999999999999887543
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-40 Score=366.08 Aligned_cols=273 Identities=16% Similarity=0.245 Sum_probs=203.5
Q ss_pred hcCCCccCccCCC--CCceeEEEEec-CCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 476 TNNFDTSAFMGEG--SQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 476 ~~~f~~~~~iG~G--~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
.++|+..+.||+| +||.||+|+.. +|+.||||+++..... ..+.+.+|++++++++|||||++++++..
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------ 97 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIA------ 97 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE------
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEE------
Confidence 3568889999999 99999999975 6999999999765432 23568889999999999999999999875
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
.+..++|||||++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 98 -~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~df 172 (389)
T 3gni_B 98 -DNELWVVTSFMAYGSAKDLICTHF-MDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGL 172 (389)
T ss_dssp -TTEEEEEEECCTTCBHHHHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCG
T ss_pred -CCEEEEEEEccCCCCHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEccc
Confidence 457899999999999999997642 24589999999999999999999998 9999999999999999999999999
Q ss_pred Cccccccccc--------ccccccccccccCcccccc--CCCCcccceeehhHHHHHHHhCCCCCCCchhHH-HHHHHHH
Q 003926 631 NLPLLAENAE--------KVGHVIPYSGSIDPTNSAR--GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL-LKNQLQA 699 (786)
Q Consensus 631 Gl~~~~~~~~--------~~~~~~~~~~~~aPe~~~~--~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~-~~~~~~~ 699 (786)
|.+....... ......++..|+|||.+.. ..++.++|||||||++|||++|++||....... ....+..
T Consensus 173 g~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~ 252 (389)
T 3gni_B 173 RSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNG 252 (389)
T ss_dssp GGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC---
T ss_pred ccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcC
Confidence 9975432111 1112356677999999876 579999999999999999999999997543221 1111110
Q ss_pred HHHhc--------cc------------cccccc---ccc------ccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHH
Q 003926 700 VVTAD--------ES------------ARRSMV---DPA------VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750 (786)
Q Consensus 700 ~~~~~--------~~------------~~~~~~---d~~------~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl 750 (786)
..... +. ...+.. .+. ............+.+++.+||+.||++|||+.|++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell 332 (389)
T 3gni_B 253 TVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLL 332 (389)
T ss_dssp -----------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHT
T ss_pred CCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHh
Confidence 00000 00 000000 000 00001122234678899999999999999999999
Q ss_pred HHHHHHHHh
Q 003926 751 WNLQFAAQV 759 (786)
Q Consensus 751 ~~l~~~~~~ 759 (786)
+|+||.+..
T Consensus 333 ~hp~f~~~~ 341 (389)
T 3gni_B 333 NHSFFKQIK 341 (389)
T ss_dssp TSGGGGGC-
T ss_pred cCHHHHHHh
Confidence 999987543
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-40 Score=364.84 Aligned_cols=278 Identities=18% Similarity=0.286 Sum_probs=199.5
Q ss_pred HhcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCC--CChHHHHHHHHHHhcCC-CCCcceeeeeeeeccccCC
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC--HSTRNFMHHIELISKLR-HRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~-H~NIv~l~g~~~~~~~~~~ 550 (786)
..++|+..+.||+|+||.||+|+. .+|+.||||++..... ...+.+.+|+.++++++ |||||++++++...
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~----- 81 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRAD----- 81 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECT-----
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecC-----
Confidence 356788999999999999999985 4699999999865432 23456889999999997 99999999988641
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
.....|+|||||+ |+|.+++... .+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 82 ~~~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DF 153 (388)
T 3oz6_A 82 NDRDVYLVFDYME-TDLHAVIRAN----ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADF 153 (388)
T ss_dssp TSSCEEEEEECCS-EEHHHHHHHT----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCC
T ss_pred CCCEEEEEecccC-cCHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCC
Confidence 2346899999998 6999999752 589999999999999999999998 9999999999999999999999999
Q ss_pred Ccccccccc----------------------cccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCC
Q 003926 631 NLPLLAENA----------------------EKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSR 687 (786)
Q Consensus 631 Gl~~~~~~~----------------------~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~ 687 (786)
|+++..... .......++..|+|||.+.. ..|+.++|||||||++|||++|++||..
T Consensus 154 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 233 (388)
T 3oz6_A 154 GLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPG 233 (388)
T ss_dssp TTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCC
Confidence 998654221 11223467888999998865 5799999999999999999999999976
Q ss_pred chhHHHHHHHHHHHHhc-cccccccccc-----------------cccccCcH-------------HHHHHHHHHHHHhc
Q 003926 688 KEVDLLKNQLQAVVTAD-ESARRSMVDP-----------------AVNKACLD-------------ESLKTMMEVCVRCL 736 (786)
Q Consensus 688 ~~~~~~~~~~~~~~~~~-~~~~~~~~d~-----------------~~~~~~~~-------------~~~~~~~~l~~~Cl 736 (786)
.+.......+....... ......+..+ ........ .....+.+++.+||
T Consensus 234 ~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L 313 (388)
T 3oz6_A 234 SSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLL 313 (388)
T ss_dssp SSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhh
Confidence 54433222222211110 0000000000 00000000 11235778999999
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhhhhcc
Q 003926 737 LKNPAERPSVEDVLWNLQFAAQVQDAWHS 765 (786)
Q Consensus 737 ~~dP~~RPt~~evl~~l~~~~~~~~~~~~ 765 (786)
+.||++|||+.|+++|+|+.......|++
T Consensus 314 ~~dP~~R~t~~e~l~Hp~~~~~~~~~~~~ 342 (388)
T 3oz6_A 314 QFNPNKRISANDALKHPFVSIFHNPNEEP 342 (388)
T ss_dssp CSSGGGSCCHHHHTTSTTTTTTCCGGGCC
T ss_pred ccCcccCCCHHHHhCCHHHHHhcCCccCC
Confidence 99999999999999999987654455544
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-40 Score=373.91 Aligned_cols=253 Identities=21% Similarity=0.380 Sum_probs=205.3
Q ss_pred HhcCCCccCccCCCCCceeEEEEecC-CcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLKN-GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
..++|...+.||+|+||.||+|+.+. +..||||+++... ...++|.+|+++|++++|||||+++|+|.. .+
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-------~~ 289 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTR-------EP 289 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-------SS
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEec-------CC
Confidence 34567888999999999999999764 8899999997643 346889999999999999999999999865 35
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++|||||++|+|.+++.... ...+++..++.++.|+++||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 290 ~~~lv~E~~~~g~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a 365 (495)
T 1opk_A 290 PFYIITEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLS 365 (495)
T ss_dssp SCEEEEECCTTCBHHHHHHHSC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCE
T ss_pred cEEEEEEccCCCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccc
Confidence 6899999999999999997632 34689999999999999999999997 9999999999999999999999999999
Q ss_pred cccccccc--cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 634 LLAENAEK--VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 634 ~~~~~~~~--~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
+....... .....++..|+|||.+....++.++|||||||++|||+| |+.||.......+...+.. . .
T Consensus 366 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~----~---~-- 436 (495)
T 1opk_A 366 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK----D---Y-- 436 (495)
T ss_dssp ECCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHT----T---C--
T ss_pred eeccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc----C---C--
Confidence 76543221 112233457999999988889999999999999999999 9999977655444332211 0 0
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
.......++ ..+.+++.+||+.||++|||+.||++.++
T Consensus 437 --~~~~~~~~~----~~l~~li~~cl~~dP~~RPs~~el~~~L~ 474 (495)
T 1opk_A 437 --RMERPEGCP----EKVYELMRACWQWNPSDRPSFAEIHQAFE 474 (495)
T ss_dssp --CCCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --CCCCCCCCC----HHHHHHHHHHcCcChhHCcCHHHHHHHHH
Confidence 011111222 35678888999999999999999999886
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-40 Score=347.87 Aligned_cols=256 Identities=16% Similarity=0.238 Sum_probs=199.0
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
+.|...+.||+|+||.||+|+.. ++..||||++..... ...+.+.+|++++++++||||+++++++.. .+.
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------~~~ 94 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFED-------YHN 94 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-------SSE
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheec-------CCe
Confidence 45778899999999999999964 689999999976543 346789999999999999999999999864 456
Q ss_pred EEEEEecCCCCChhHHhhcC-CCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceee---cCCCcccccCC
Q 003926 555 IFLIFEYVPNGTLRSWISEG-HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL---DQNLVAKISSY 630 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILl---d~~~~~kl~Df 630 (786)
.++||||+++|+|.+++... .....+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+||
T Consensus 95 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Df 171 (285)
T 3is5_A 95 MYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDF 171 (285)
T ss_dssp EEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCC
T ss_pred EEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEee
Confidence 89999999999999988542 1124689999999999999999999997 99999999999999 45678999999
Q ss_pred CcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 631 NLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 631 Gl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
|++.............++..|+|||.+. +.++.++||||||+++|||++|+.||.............. ... ..
T Consensus 172 g~a~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~---~~~-~~-- 244 (285)
T 3is5_A 172 GLAELFKSDEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATY---KEP-NY-- 244 (285)
T ss_dssp CCCCC----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---CCC-CC--
T ss_pred ecceecCCcccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhcc---CCc-cc--
Confidence 9997655444444556788899999875 5789999999999999999999999987654443322111 100 00
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
... .... ...+.+++.+||+.||++|||+.||++|+||.
T Consensus 245 --~~~-~~~~----~~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~ 283 (285)
T 3is5_A 245 --AVE-CRPL----TPQAVDLLKQMLTKDPERRPSAAQVLHHEWFK 283 (285)
T ss_dssp --CC---CCC----CHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGG
T ss_pred --ccc-cCcC----CHHHHHHHHHHccCChhhCcCHHHHhcCHHhh
Confidence 000 0011 23566788899999999999999999998865
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-40 Score=356.33 Aligned_cols=258 Identities=23% Similarity=0.358 Sum_probs=204.9
Q ss_pred HHHHhcCCCccCccCCCCCceeEEEEec------CCcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeee
Q 003926 472 LEEATNNFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFE 544 (786)
Q Consensus 472 l~~~~~~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~ 544 (786)
+....++|+..+.||+|+||.||+|+.. +++.||||+++..... ..+.|.+|++++++++||||++++++|..
T Consensus 42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 121 (343)
T 1luf_A 42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV 121 (343)
T ss_dssp TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence 3445678999999999999999999964 3589999999765332 24679999999999999999999999864
Q ss_pred ccccCCCCceEEEEEecCCCCChhHHhhcCCC---------------------CCCCCHHHHHHHHHHHHHHhhhhhcCC
Q 003926 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHA---------------------HQSLTWTQRISAAIGVAKGIQFLHTGI 603 (786)
Q Consensus 545 ~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~---------------------~~~l~~~~~~~ia~~ia~gL~yLH~~~ 603 (786)
.+..++||||+++|+|.+++..... ...+++.+++.++.|+++||.|||+.
T Consensus 122 -------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~- 193 (343)
T 1luf_A 122 -------GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER- 193 (343)
T ss_dssp -------SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred -------CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC-
Confidence 3568999999999999999975321 14689999999999999999999997
Q ss_pred CCCccccCCCCCceeecCCCcccccCCCccccccccc---ccccccccccccCccccccCCCCcccceeehhHHHHHHHh
Q 003926 604 VPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV 680 (786)
Q Consensus 604 ~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~---~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt 680 (786)
+|+||||||+||+++.++.+||+|||+++...... ......++..|+|||.+....++.++|||||||++|||+|
T Consensus 194 --~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t 271 (343)
T 1luf_A 194 --KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271 (343)
T ss_dssp --TCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred --CeecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHh
Confidence 99999999999999999999999999986543221 1223345677999999888889999999999999999999
Q ss_pred -CCCCCCCchhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 681 -GRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 681 -G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
|+.||...........+. .. .. +.....++ ..+.+++.+||+.||++||++.||++++.
T Consensus 272 ~g~~p~~~~~~~~~~~~~~----~~--~~-----~~~~~~~~----~~l~~li~~~l~~~p~~Rps~~~~~~~L~ 331 (343)
T 1luf_A 272 YGLQPYYGMAHEEVIYYVR----DG--NI-----LACPENCP----LELYNLMRLCWSKLPADRPSFCSIHRILQ 331 (343)
T ss_dssp TTCCTTTTSCHHHHHHHHH----TT--CC-----CCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cCCCcCCCCChHHHHHHHh----CC--Cc-----CCCCCCCC----HHHHHHHHHHcccCcccCCCHHHHHHHHH
Confidence 999987655443322211 11 00 01111222 35678888999999999999999999986
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=343.62 Aligned_cols=258 Identities=20% Similarity=0.286 Sum_probs=208.3
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.++|+..+.||+|+||.||+|... +|+.||||++...... ..+.+.+|++++++++||||+++++++.. .
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~ 77 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE-------E 77 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-------S
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEc-------C
Confidence 467888999999999999999965 6899999999765432 23678899999999999999999999865 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCc---ccccC
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV---AKISS 629 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~---~kl~D 629 (786)
+..++||||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+||+++.++. +||+|
T Consensus 78 ~~~~~v~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~D 151 (284)
T 3kk8_A 78 SFHYLVFDLVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLAD 151 (284)
T ss_dssp SEEEEEECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECC
T ss_pred CEEEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEee
Confidence 5689999999999999988753 3589999999999999999999997 9999999999999987655 99999
Q ss_pred CCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 630 YNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 630 fGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
||++.............++..|+|||......++.++||||||+++|||++|+.||...........+.. .. .
T Consensus 152 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~---~~----~ 224 (284)
T 3kk8_A 152 FGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKA---GA----Y 224 (284)
T ss_dssp CTTCEECCSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---TC----C
T ss_pred ceeeEEcccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHh---cc----c
Confidence 9998766544444445678889999999888899999999999999999999999976654433322211 10 0
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
....+. .. .....+.+++.+||+.||++|||+.|+++|+|+...
T Consensus 225 ~~~~~~-~~----~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~ 268 (284)
T 3kk8_A 225 DYPSPE-WD----TVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNR 268 (284)
T ss_dssp CCCTTT-TT----TSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSC
T ss_pred cCCchh-hc----ccCHHHHHHHHHHcccChhhCCCHHHHhcCccccCC
Confidence 000111 01 112356688889999999999999999999998764
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-40 Score=369.35 Aligned_cols=271 Identities=17% Similarity=0.194 Sum_probs=201.7
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.++|+..+.||+|+||+||+|+.. +|+.||||++..... ...+.+.+|++++++++|||||++++++...... ...
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~-~~~ 139 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL-EEF 139 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCST-TTC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCcc-ccC
Confidence 457888999999999999999854 689999999975422 2346789999999999999999999988642110 123
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
...|+|||||++ +|.+.+.. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 140 ~~~~lv~E~~~~-~l~~~~~~-----~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~ 210 (464)
T 3ttj_A 140 QDVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 210 (464)
T ss_dssp CEEEEEEECCSE-EHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred CeEEEEEeCCCC-CHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEe
Confidence 568999999986 57666643 489999999999999999999998 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHH-HHHHHHHHHHhccccccc-
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL-LKNQLQAVVTADESARRS- 710 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~- 710 (786)
++............++..|+|||.+.+..|+.++||||+||++|||++|++||.+.+... +...+.............
T Consensus 211 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~ 290 (464)
T 3ttj_A 211 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 290 (464)
T ss_dssp C-----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTS
T ss_pred eeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHc
Confidence 976654444445677889999999988899999999999999999999999998755332 222222111100000000
Q ss_pred ---------------------ccccccc---ccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 711 ---------------------MVDPAVN---KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 711 ---------------------~~d~~~~---~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
.+..... ..........+.+++.+||+.||++|||+.|+++|+||.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~ 360 (464)
T 3ttj_A 291 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360 (464)
T ss_dssp CHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTG
T ss_pred chhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhh
Confidence 0000000 000112245678999999999999999999999999976
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-40 Score=351.81 Aligned_cols=255 Identities=16% Similarity=0.240 Sum_probs=206.8
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC------ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH------STRNFMHHIELISKLRHRHLVSALGHCFECYFDD 549 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~------~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~ 549 (786)
+.|+..+.||+|+||.||+|+.. +|+.||||+++..... ..++|.+|++++++++||||+++++++..
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----- 86 (321)
T 2a2a_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYEN----- 86 (321)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----
T ss_pred ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEec-----
Confidence 45788899999999999999965 6899999999765322 35679999999999999999999998865
Q ss_pred CCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC----cc
Q 003926 550 SSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL----VA 625 (786)
Q Consensus 550 ~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~----~~ 625 (786)
.+..++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+
T Consensus 87 --~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~ 158 (321)
T 2a2a_A 87 --RTDVVLILELVSGGELFDFLAQK---ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHI 158 (321)
T ss_dssp --SSEEEEEECCCCSCBHHHHHHTC---SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCE
T ss_pred --CCEEEEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCE
Confidence 45689999999999999999753 3689999999999999999999997 999999999999999887 79
Q ss_pred cccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcc
Q 003926 626 KISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADE 705 (786)
Q Consensus 626 kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 705 (786)
||+|||++.............++..|+|||......++.++|||||||++|||++|+.||...........+. ...
T Consensus 159 kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~---~~~- 234 (321)
T 2a2a_A 159 KLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT---SVS- 234 (321)
T ss_dssp EECCCTTCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHH---TTC-
T ss_pred EEccCccceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH---hcc-
Confidence 9999999876654444444567889999999988889999999999999999999999997654433222111 100
Q ss_pred ccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 706 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
...++...... ...+.+++.+||+.||++|||+.|+++|+|+.
T Consensus 235 ----~~~~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~ 277 (321)
T 2a2a_A 235 ----YDFDEEFFSHT----SELAKDFIRKLLVKETRKRLTIQEALRHPWIT 277 (321)
T ss_dssp ----CCCCHHHHTTC----CHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTS
T ss_pred ----cccChhhhccc----CHHHHHHHHHHcCCChhhCcCHHHHhcCcccc
Confidence 00111111111 23567888899999999999999999999864
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-40 Score=353.59 Aligned_cols=256 Identities=19% Similarity=0.275 Sum_probs=202.9
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCC---hHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHS---TRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~---~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~~ 551 (786)
++|+..+.||+|+||.||+|+.+ +|+.||||+++...... .+.+.+|+.+++++ +|||||++++++..
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~------- 81 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT------- 81 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-------
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEe-------
Confidence 46788899999999999999975 68999999998654332 34588999999987 89999999998864
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
.+..|+||||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 82 ~~~~~lv~e~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG 155 (345)
T 3a8x_A 82 ESRLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYG 155 (345)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGG
T ss_pred CCEEEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEecc
Confidence 45789999999999999999753 3589999999999999999999997 99999999999999999999999999
Q ss_pred cccccc-cccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhH-----HHHHHHHHHHHhcc
Q 003926 632 LPLLAE-NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVD-----LLKNQLQAVVTADE 705 (786)
Q Consensus 632 l~~~~~-~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~-----~~~~~~~~~~~~~~ 705 (786)
+++... .........++..|+|||.+....++.++|||||||++|||++|++||...... .....+........
T Consensus 156 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~ 235 (345)
T 3a8x_A 156 MCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ 235 (345)
T ss_dssp GCBCSCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCC
T ss_pred ccccccCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCC
Confidence 987532 222334556888999999998888999999999999999999999999642110 00011111111110
Q ss_pred ccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCH------HHHHHHHHHHH
Q 003926 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSV------EDVLWNLQFAA 757 (786)
Q Consensus 706 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~------~evl~~l~~~~ 757 (786)
...+.. ....+.+++.+||+.||++||++ .|+++|+||..
T Consensus 236 --------~~~p~~----~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~ 281 (345)
T 3a8x_A 236 --------IRIPRS----LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 281 (345)
T ss_dssp --------CCCCTT----SCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTT
T ss_pred --------CCCCCC----CCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCC
Confidence 011111 12356678889999999999995 89999999864
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=343.51 Aligned_cols=259 Identities=17% Similarity=0.259 Sum_probs=205.2
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC------ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH------STRNFMHHIELISKLRHRHLVSALGHCFECYFDD 549 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~------~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~ 549 (786)
++|...+.||+|+||.||+|+.. +|+.||||.++..... ..+.|.+|++++++++||||+++++++..
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----- 79 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFEN----- 79 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecC-----
Confidence 45778899999999999999976 6999999998754321 35789999999999999999999999865
Q ss_pred CCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC----cc
Q 003926 550 SSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL----VA 625 (786)
Q Consensus 550 ~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~----~~ 625 (786)
.+..++||||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++ .+
T Consensus 80 --~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~ 151 (283)
T 3bhy_A 80 --KTDVVLILELVSGGELFDFLAEK---ESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRI 151 (283)
T ss_dssp --SSEEEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCE
T ss_pred --CCeEEEEEeecCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCce
Confidence 45689999999999999999753 3589999999999999999999997 999999999999999877 79
Q ss_pred cccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcc
Q 003926 626 KISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADE 705 (786)
Q Consensus 626 kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 705 (786)
||+|||++.............++..|+|||......++.++||||||+++|||++|+.||...........+. ...
T Consensus 152 kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~---~~~- 227 (283)
T 3bhy_A 152 KLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNIS---AVN- 227 (283)
T ss_dssp EECCCTTCEECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH---TTC-
T ss_pred EEEecccceeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhH---hcc-
Confidence 9999999876544333344557788999999988889999999999999999999999997654433222111 100
Q ss_pred ccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 003926 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760 (786)
Q Consensus 706 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~ 760 (786)
...++..... ....+.+++.+||+.||++|||+.|+++|+|+....+
T Consensus 228 ----~~~~~~~~~~----~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~ 274 (283)
T 3bhy_A 228 ----YDFDEEYFSN----TSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRR 274 (283)
T ss_dssp ----CCCCHHHHTT----CCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHH
T ss_pred ----cCCcchhccc----CCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHH
Confidence 0011111111 1235678888999999999999999999999887544
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-40 Score=363.20 Aligned_cols=257 Identities=15% Similarity=0.251 Sum_probs=194.1
Q ss_pred cCCCcc-CccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHh-cCCCCCcceeeeeeeeccccCCCCc
Q 003926 477 NNFDTS-AFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELIS-KLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 477 ~~f~~~-~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~-~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
++|... +.||+|+||+||+|+.. +|+.||||+++. ...+.+|++++. ..+|||||++++++.... ....
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~---~~~~ 132 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLY---AGRK 132 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEE---TTEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecc---cCCc
Confidence 455554 68999999999999965 689999999863 346788998874 458999999999876421 1235
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC---CCcccccCC
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ---NLVAKISSY 630 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~---~~~~kl~Df 630 (786)
..|+|||||++|+|.+++.... ...+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+||
T Consensus 133 ~~~lv~E~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DF 208 (400)
T 1nxk_A 133 CLLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDF 208 (400)
T ss_dssp EEEEEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCC
T ss_pred EEEEEEEeCCCCcHHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEec
Confidence 6899999999999999998632 24699999999999999999999997 9999999999999998 788999999
Q ss_pred CcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHH----HHHHHHHHHHhccc
Q 003926 631 NLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL----LKNQLQAVVTADES 706 (786)
Q Consensus 631 Gl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~----~~~~~~~~~~~~~~ 706 (786)
|+++............++..|+|||.+....|+.++|||||||++|||++|++||....... ....+. ...
T Consensus 209 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~----~~~- 283 (400)
T 1nxk_A 209 GFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR----MGQ- 283 (400)
T ss_dssp TTCEECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHH----HTC-
T ss_pred ccccccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHH----cCc-
Confidence 99976554434445567889999999988899999999999999999999999996543211 111111 000
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.....+. .......+.+++.+||+.||++|||+.|+++|+|+.+
T Consensus 284 --~~~~~~~-----~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~ 327 (400)
T 1nxk_A 284 --YEFPNPE-----WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 327 (400)
T ss_dssp --CCCCTTT-----TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHT
T ss_pred --ccCCCcc-----cccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccC
Confidence 0000110 0112235678888999999999999999999999875
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-40 Score=368.01 Aligned_cols=267 Identities=15% Similarity=0.178 Sum_probs=209.9
Q ss_pred CHHHHHHHhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeee
Q 003926 468 SLEELEEATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCF 543 (786)
Q Consensus 468 ~~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~ 543 (786)
+++++....++|+..+.||+|+||+||+|+.+ +|+.||||+++.... ...+.+.+|..++.+++|||||++++++.
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 34555666789999999999999999999975 699999999975321 22345889999999999999999999886
Q ss_pred eccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC
Q 003926 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL 623 (786)
Q Consensus 544 ~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~ 623 (786)
+ .+..|+|||||++|+|.+++.+.. ..+++.....++.|++.||+|||+. +|+||||||+|||+|.++
T Consensus 132 ~-------~~~~~lVmE~~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g 199 (412)
T 2vd5_A 132 D-------ENYLYLVMEYYVGGDLLTLLSKFG--ERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCG 199 (412)
T ss_dssp C-------SSEEEEEECCCCSCBHHHHHHHHS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTS
T ss_pred e-------CCEEEEEEcCCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCC
Confidence 5 467899999999999999997532 3689999999999999999999997 999999999999999999
Q ss_pred cccccCCCcccccccccc--cccccccccccCccccc-------cCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHH
Q 003926 624 VAKISSYNLPLLAENAEK--VGHVIPYSGSIDPTNSA-------RGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLK 694 (786)
Q Consensus 624 ~~kl~DfGl~~~~~~~~~--~~~~~~~~~~~aPe~~~-------~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~ 694 (786)
++||+|||+++....... .....++..|+|||.+. ...|+.++|||||||++|||++|++||.........
T Consensus 200 ~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~ 279 (412)
T 2vd5_A 200 HIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETY 279 (412)
T ss_dssp CEEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH
T ss_pred CEEEeechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHH
Confidence 999999999976543322 22356888999999886 356899999999999999999999999776544332
Q ss_pred HHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCC---CCHHHHHHHHHHHHH
Q 003926 695 NQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAER---PSVEDVLWNLQFAAQ 758 (786)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~R---Pt~~evl~~l~~~~~ 758 (786)
..+....... .-|...... ...+.+++.+||+ +|++| |+++||++|+||...
T Consensus 280 ~~i~~~~~~~-------~~p~~~~~~----s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i 334 (412)
T 2vd5_A 280 GKIVHYKEHL-------SLPLVDEGV----PEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGL 334 (412)
T ss_dssp HHHHTHHHHC-------CCC----CC----CHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTC
T ss_pred HHHHhcccCc-------CCCccccCC----CHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCC
Confidence 2221110000 001111111 2356678889999 99998 699999999998753
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-41 Score=360.18 Aligned_cols=270 Identities=17% Similarity=0.285 Sum_probs=202.8
Q ss_pred cCCCccCccCCCCCceeEEEEe-----cCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-----KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
++|+..+.||+|+||.||+|++ .+++.||||++........+.|.+|++++++++||||+++++++.. ..
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~ 97 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYG-----PG 97 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----SS
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEec-----CC
Confidence 4677889999999999999984 3688999999986654455679999999999999999999998763 22
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
....++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 98 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg 172 (327)
T 3lxl_A 98 RQSLRLVMEYLPSGCLRDFLQRHR--ARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFG 172 (327)
T ss_dssp SCEEEEEEECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGG
T ss_pred CceEEEEEeecCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccc
Confidence 456899999999999999997532 3589999999999999999999997 99999999999999999999999999
Q ss_pred cccccccccc----cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccc
Q 003926 632 LPLLAENAEK----VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESA 707 (786)
Q Consensus 632 l~~~~~~~~~----~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (786)
++........ .....++..|+|||.+....++.++||||||+++|||++|+.|+......................
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 252 (327)
T 3lxl_A 173 LAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSR 252 (327)
T ss_dssp GCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHH
T ss_pred cceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHH
Confidence 9875533221 122335566999999988889999999999999999999999986543321111000000000000
Q ss_pred ccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 708 RRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 708 ~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
.............+......+.+++.+||+.||++|||+.|++++++..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 301 (327)
T 3lxl_A 253 LLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDML 301 (327)
T ss_dssp HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC
T ss_pred HHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 0000000000001112234567888899999999999999999999633
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=358.63 Aligned_cols=258 Identities=20% Similarity=0.372 Sum_probs=205.6
Q ss_pred hcCCCccCccCCCCCceeEEEEec--------CCcEEEEEEecccCCC-ChHHHHHHHHHHhcC-CCCCcceeeeeeeec
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK--------NGTFVAIRCLKMKKCH-STRNFMHHIELISKL-RHRHLVSALGHCFEC 545 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~ 545 (786)
.++|...+.||+|+||.||+|+.. ++..||||+++..... ..+.+.+|+++++++ +|||||+++++|..
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~- 146 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ- 146 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc-
Confidence 456788899999999999999852 2468999999765332 246799999999999 99999999999864
Q ss_pred cccCCCCceEEEEEecCCCCChhHHhhcCCC-------------CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCC
Q 003926 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGHA-------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNL 612 (786)
Q Consensus 546 ~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdl 612 (786)
.+..++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+. +|+||||
T Consensus 147 ------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dl 217 (382)
T 3tt0_A 147 ------DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDL 217 (382)
T ss_dssp ------SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred ------CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCC
Confidence 3568999999999999999976431 23589999999999999999999997 9999999
Q ss_pred CCCceeecCCCcccccCCCccccccccc---ccccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCc
Q 003926 613 KITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRK 688 (786)
Q Consensus 613 k~~NILld~~~~~kl~DfGl~~~~~~~~---~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~ 688 (786)
||+|||++.++.+||+|||+++...... ......++..|+|||.+....++.++|||||||++|||+| |+.||...
T Consensus 218 kp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~ 297 (382)
T 3tt0_A 218 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 297 (382)
T ss_dssp CGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred CcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999999999999999999987554322 1222344567999999988899999999999999999999 99999876
Q ss_pred hhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 689 EVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
....+...+.. .. .+.....++ ..+.+++.+||+.||++|||+.||+++++....
T Consensus 298 ~~~~~~~~~~~---~~--------~~~~~~~~~----~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 352 (382)
T 3tt0_A 298 PVEELFKLLKE---GH--------RMDKPSNCT----NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 352 (382)
T ss_dssp CHHHHHHHHHT---TC--------CCCCCSSCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHc---CC--------CCCCCccCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 55443332211 10 011111222 356788889999999999999999999975543
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-40 Score=355.57 Aligned_cols=265 Identities=15% Similarity=0.138 Sum_probs=202.2
Q ss_pred HHHHhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC-----CCChHHHHHHHHHHhcCCCCCcceeeeeeeec
Q 003926 472 LEEATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK-----CHSTRNFMHHIELISKLRHRHLVSALGHCFEC 545 (786)
Q Consensus 472 l~~~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-----~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~ 545 (786)
+....++|...+.||+|+||.||+|+.. ++..||||++.... ....+.|.+|++++++++|||||++++++.+
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~- 99 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED- 99 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc-
Confidence 3455677999999999999999999964 68899999987542 2335679999999999999999999999865
Q ss_pred cccCCCCceEEEEEecCCCCChhHHhhcCC-------------------------------------CCCCCCHHHHHHH
Q 003926 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGH-------------------------------------AHQSLTWTQRISA 588 (786)
Q Consensus 546 ~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~-------------------------------------~~~~l~~~~~~~i 588 (786)
.+..++|||||++|+|.+++.... ....+++.....+
T Consensus 100 ------~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 173 (345)
T 3hko_A 100 ------EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNI 173 (345)
T ss_dssp ------SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHH
T ss_pred ------CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHH
Confidence 457899999999999999985210 0112356677889
Q ss_pred HHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC--cccccCCCccccccccc-----ccccccccccccCcccccc--
Q 003926 589 AIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL--VAKISSYNLPLLAENAE-----KVGHVIPYSGSIDPTNSAR-- 659 (786)
Q Consensus 589 a~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~--~~kl~DfGl~~~~~~~~-----~~~~~~~~~~~~aPe~~~~-- 659 (786)
+.|++.||+|||+. +|+||||||+||+++.++ .+||+|||++....... ......++..|+|||.+..
T Consensus 174 ~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 250 (345)
T 3hko_A 174 MRQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTN 250 (345)
T ss_dssp HHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSS
T ss_pred HHHHHHHHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCC
Confidence 99999999999998 999999999999998776 89999999986543211 1234457788999998864
Q ss_pred CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCC
Q 003926 660 GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN 739 (786)
Q Consensus 660 ~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~d 739 (786)
..++.++|||||||++|||++|+.||...........+. ... .....+.. ......+.+++.+||+.|
T Consensus 251 ~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~---~~~----~~~~~~~~-----~~~~~~~~~li~~~l~~~ 318 (345)
T 3hko_A 251 ESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVL---NKK----LCFENPNY-----NVLSPLARDLLSNLLNRN 318 (345)
T ss_dssp SCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---HCC----CCTTSGGG-----GGSCHHHHHHHHHHSCSC
T ss_pred CCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHH---hcc----cccCCccc-----ccCCHHHHHHHHHHcCCC
Confidence 678999999999999999999999997654433222111 110 00111110 111235668888999999
Q ss_pred CCCCCCHHHHHHHHHHHHH
Q 003926 740 PAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 740 P~~RPt~~evl~~l~~~~~ 758 (786)
|++|||+.|+++|+|+.+.
T Consensus 319 p~~Rps~~~~l~hp~~~~~ 337 (345)
T 3hko_A 319 VDERFDAMRALQHPWISQF 337 (345)
T ss_dssp TTTSCCHHHHHHSHHHHTT
T ss_pred hhHCCCHHHHhcChhhccC
Confidence 9999999999999998754
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-40 Score=341.25 Aligned_cols=251 Identities=20% Similarity=0.338 Sum_probs=202.5
Q ss_pred hcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
.++|+..+.||+|+||.||+|+.+++..||||+++... ...+++.+|++++++++||||+++++++.. ....
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------~~~~ 78 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSK-------EYPI 78 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECS-------SSSE
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEcc-------CCce
Confidence 35677889999999999999999888899999997654 345789999999999999999999998864 4568
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 79 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~ 153 (268)
T 3sxs_A 79 YIVTEYISNGCLLNYLRSH--GKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRY 153 (268)
T ss_dssp EEEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEE
T ss_pred EEEEEccCCCcHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCcccee
Confidence 9999999999999999753 23589999999999999999999997 999999999999999999999999999865
Q ss_pred ccccccc--ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 636 AENAEKV--GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 636 ~~~~~~~--~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
....... ....++..|+|||......++.++||||||+++|||+| |+.||...........+. ... ...
T Consensus 154 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~---~~~-----~~~ 225 (268)
T 3sxs_A 154 VLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVS---QGH-----RLY 225 (268)
T ss_dssp CCTTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH---TTC-----CCC
T ss_pred cchhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHH---cCC-----CCC
Confidence 5332211 22233456999999988889999999999999999999 999997654433222111 110 111
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
.+. ..+ ..+.+++.+||+.||++|||+.|++++++
T Consensus 226 ~~~---~~~----~~l~~li~~~l~~~p~~Rps~~~ll~~L~ 260 (268)
T 3sxs_A 226 RPH---LAS----DTIYQIMYSCWHELPEKRPTFQQLLSSIE 260 (268)
T ss_dssp CCT---TSC----HHHHHHHHHTTCSSGGGSCCHHHHHHHHG
T ss_pred CCC---cCh----HHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111 111 34667888999999999999999999986
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-40 Score=370.93 Aligned_cols=252 Identities=24% Similarity=0.409 Sum_probs=199.7
Q ss_pred HhcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
..++|...+.||+|+||.||+|+.+++..||||+++... ...++|.+|+++|++++|||||+++|++.+ +.
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--------~~ 252 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE--------EP 252 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS--------SS
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC--------Cc
Confidence 456678889999999999999999888889999998654 346789999999999999999999998753 34
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++|||||++|+|.+++.... ...+++..++.++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 253 ~~iv~e~~~~gsL~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~ 328 (452)
T 1fmk_A 253 IYIVTEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLAR 328 (452)
T ss_dssp CEEEECCCTTCBHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC
T ss_pred eEEEehhhcCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccce
Confidence 799999999999999997421 23589999999999999999999997 99999999999999999999999999997
Q ss_pred ccccccc--cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 635 LAENAEK--VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 635 ~~~~~~~--~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
....... .....++..|+|||.+..+.++.++|||||||++|||+| |+.||.......+...+.. . .+
T Consensus 329 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~----~---~~-- 399 (452)
T 1fmk_A 329 LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER----G---YR-- 399 (452)
T ss_dssp --------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT----T---CC--
T ss_pred ecCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc----C---CC--
Confidence 6543221 122234567999999988899999999999999999999 9999976554333222211 0 00
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
...+..+ ...+.+++.+||+.||++|||+.+|++.+.
T Consensus 400 --~~~~~~~----~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~ 436 (452)
T 1fmk_A 400 --MPCPPEC----PESLHDLMCQCWRKEPEERPTFEYLQAFLE 436 (452)
T ss_dssp --CCCCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --CCCCCCC----CHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 0111122 235678888999999999999999998885
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-40 Score=349.37 Aligned_cols=268 Identities=18% Similarity=0.276 Sum_probs=201.7
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCC--hHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHS--TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~--~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
++|+..+.||+|+||+||+|+.. +|+.||||++....... .+.+.+|++++++++||||+++++++.. .+
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------~~ 75 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRR-------KR 75 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-------TT
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeec-------CC
Confidence 56888899999999999999975 59999999987554322 4568899999999999999999999875 45
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++||||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 76 ~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 149 (311)
T 4agu_A 76 RLHLVFEYCDHTVLHELDRYQ---RGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFA 149 (311)
T ss_dssp EEEEEEECCSEEHHHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred eEEEEEEeCCCchHHHHHhhh---cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCc
Confidence 689999999999999988753 3589999999999999999999997 9999999999999999999999999998
Q ss_pred cccccc-cccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcc------
Q 003926 634 LLAENA-EKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADE------ 705 (786)
Q Consensus 634 ~~~~~~-~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~------ 705 (786)
...... .......++..|+|||.+.. ..++.++|||||||++|||++|++||...........+........
T Consensus 150 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (311)
T 4agu_A 150 RLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQV 229 (311)
T ss_dssp EECC------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHH
T ss_pred hhccCcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccc
Confidence 655422 22234456778999998865 5689999999999999999999999976554333222222111100
Q ss_pred ----cc--cccccccccccc---CcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 706 ----SA--RRSMVDPAVNKA---CLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 706 ----~~--~~~~~d~~~~~~---~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.. .....++..... ........+.+++.+||+.||++|||++|+++|+||..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~ 290 (311)
T 4agu_A 230 FSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFEN 290 (311)
T ss_dssp HHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTT
T ss_pred cccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHh
Confidence 00 001111110000 00112345778899999999999999999999998765
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-39 Score=355.93 Aligned_cols=282 Identities=18% Similarity=0.251 Sum_probs=208.0
Q ss_pred HHHHHHHhcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCC-----------hHHHHHHHHHHhcCCCCCcce
Q 003926 469 LEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHS-----------TRNFMHHIELISKLRHRHLVS 537 (786)
Q Consensus 469 ~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~-----------~~~f~~E~~~l~~l~H~NIv~ 537 (786)
.+++....++|...+.||+|+||.||+|+..+|..||||++....... .+.|.+|++++++++||||++
T Consensus 14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 93 (362)
T 3pg1_A 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG 93 (362)
T ss_dssp HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence 567888899999999999999999999998889999999997543221 267999999999999999999
Q ss_pred eeeeeeeccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCce
Q 003926 538 ALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDI 617 (786)
Q Consensus 538 l~g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NI 617 (786)
+++++.... .......++||||++ |+|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+||
T Consensus 94 ~~~~~~~~~--~~~~~~~~lv~e~~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NI 165 (362)
T 3pg1_A 94 LRDIFVHFE--EPAMHKLYLVTELMR-TDLAQVIHDQ--RIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNI 165 (362)
T ss_dssp CSEEEEECC--TTTCCEEEEEEECCS-EEHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGE
T ss_pred eeeeEEecc--CCCcceEEEEEccCC-CCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHE
Confidence 999986521 223457899999998 6999988753 34689999999999999999999998 999999999999
Q ss_pred eecCCCcccccCCCcccccccccccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHH
Q 003926 618 LLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQ 696 (786)
Q Consensus 618 Lld~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~ 696 (786)
+++.++.+||+|||++.............++..|+|||.+.. ..++.++|||||||++|||++|++||...........
T Consensus 166 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~ 245 (362)
T 3pg1_A 166 LLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNK 245 (362)
T ss_dssp EECTTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred EEcCCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 999999999999999975544433444567778999998766 6789999999999999999999999976544332222
Q ss_pred HHHHHHhcc-cc------------cccccc---ccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 697 LQAVVTADE-SA------------RRSMVD---PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 697 ~~~~~~~~~-~~------------~~~~~d---~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
+........ .. ...... ..............+.+++.+||+.||++|||+.|+++|+||...
T Consensus 246 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~ 323 (362)
T 3pg1_A 246 IVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESL 323 (362)
T ss_dssp HHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTT
T ss_pred HHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhc
Confidence 211111000 00 000000 000000011123457788999999999999999999999998753
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-39 Score=355.31 Aligned_cols=284 Identities=17% Similarity=0.193 Sum_probs=199.6
Q ss_pred HHHHHHhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeecccc
Q 003926 470 EELEEATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFD 548 (786)
Q Consensus 470 ~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~ 548 (786)
.+.....++|+..+.||+|+||.||+|+.. +|+.||||++.... .....+.+|++.++.++|||||++++++......
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 345667789999999999999999999964 68999999986543 3345678889999999999999999998763322
Q ss_pred CCCCceEEEEEecCCCCChhHHhhc-CCCCCCCCHHHHHHHHHHHHHHhhhhh--cCCCCCccccCCCCCceeecC-CCc
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISE-GHAHQSLTWTQRISAAIGVAKGIQFLH--TGIVPGVFSNNLKITDILLDQ-NLV 624 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~-~~~~~~l~~~~~~~ia~~ia~gL~yLH--~~~~~~ivHrdlk~~NILld~-~~~ 624 (786)
+......++||||+++ +|.+.+.. ......+++.....++.|++.||.||| +. +|+||||||+|||++. ++.
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~ 170 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGT 170 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTE
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCc
Confidence 2233457899999986 55444332 112346889999999999999999999 65 9999999999999997 899
Q ss_pred ccccCCCcccccccccccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHh
Q 003926 625 AKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTA 703 (786)
Q Consensus 625 ~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~ 703 (786)
+||+|||+++............++..|+|||.+... .++.++|||||||++|||+||++||...........+......
T Consensus 171 ~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~ 250 (360)
T 3e3p_A 171 LKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGC 250 (360)
T ss_dssp EEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCC
T ss_pred EEEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCC
Confidence 999999999766544444455678889999987554 4899999999999999999999999875543332222211111
Q ss_pred cccccccccccc----------------ccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 704 DESARRSMVDPA----------------VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 704 ~~~~~~~~~d~~----------------~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
.........++. ............+.+++.+||+.||++|||+.|+++|+||.+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~ 321 (360)
T 3e3p_A 251 PSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDEL 321 (360)
T ss_dssp CCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGG
T ss_pred CCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCcccccc
Confidence 000000000000 0000011134567889999999999999999999999998754
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-40 Score=353.75 Aligned_cols=274 Identities=15% Similarity=0.284 Sum_probs=192.7
Q ss_pred HHHhcCCCccCccCCCCCceeEEEEecC-C---cEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeecc
Q 003926 473 EEATNNFDTSAFMGEGSQGQMYRGRLKN-G---TFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECY 546 (786)
Q Consensus 473 ~~~~~~f~~~~~iG~G~fg~Vy~~~~~~-g---~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~ 546 (786)
....++|+..+.||+|+||.||+|+... + ..||||+++.... ...+.|.+|++++++++||||+++++++....
T Consensus 19 ~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 98 (323)
T 3qup_A 19 LIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR 98 (323)
T ss_dssp BCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-
T ss_pred ccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccc
Confidence 3445678999999999999999999653 3 2899999976532 23577999999999999999999999987522
Q ss_pred ccCCCCceEEEEEecCCCCChhHHhhcCC---CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC
Q 003926 547 FDDSSVSRIFLIFEYVPNGTLRSWISEGH---AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL 623 (786)
Q Consensus 547 ~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~---~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~ 623 (786)
.. ......++||||+++|+|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 99 ~~-~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~ 174 (323)
T 3qup_A 99 AK-GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDM 174 (323)
T ss_dssp -------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTS
T ss_pred cc-cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCC
Confidence 11 01123489999999999999986421 123589999999999999999999998 999999999999999999
Q ss_pred cccccCCCccccccccccc---ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHH
Q 003926 624 VAKISSYNLPLLAENAEKV---GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQA 699 (786)
Q Consensus 624 ~~kl~DfGl~~~~~~~~~~---~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~ 699 (786)
.+||+|||+++........ ....++..|+|||.+....++.++|||||||++|||++ |++||...........+..
T Consensus 175 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~ 254 (323)
T 3qup_A 175 TVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIG 254 (323)
T ss_dssp CEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT
T ss_pred CEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhc
Confidence 9999999998655332211 12234557999999988889999999999999999999 8999976554433222211
Q ss_pred HHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhhhhhccCC
Q 003926 700 VVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWHSQS 767 (786)
Q Consensus 700 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~~~~~~~~ 767 (786)
.. . +.....+ ...+.+++.+||+.||++|||+.|+++.++.. ..+.|....
T Consensus 255 ---~~----~----~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~--l~~~~~~~~ 305 (323)
T 3qup_A 255 ---GN----R----LKQPPEC----MEEVYDLMYQCWSADPKQRPSFTCLRMELENI--LGHLSVLST 305 (323)
T ss_dssp ---TC----C----CCCCTTC----CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH--HHC------
T ss_pred ---CC----C----CCCCCcc----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHH--HHHhhhcCC
Confidence 00 0 0111112 23567888999999999999999999888743 344454443
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-39 Score=343.88 Aligned_cols=254 Identities=21% Similarity=0.328 Sum_probs=197.2
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCC---hHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHS---TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~---~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|+..+.||+|+||.||+|+.. +++.||||++....... .+.|.+|+.++++++||||+++++++.. .
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-------~ 83 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEE-------D 83 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEEC-------S
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeee-------C
Confidence 46788899999999999999954 68999999986544322 3578999999999999999999998864 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 84 ~~~~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~ 157 (294)
T 4eqm_A 84 DCYYLVMEYIEGPTLSEYIESH---GPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGI 157 (294)
T ss_dssp SEEEEEEECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSS
T ss_pred CeEEEEEeCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCC
Confidence 5789999999999999999753 3589999999999999999999997 999999999999999999999999999
Q ss_pred cccccccc--ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 633 PLLAENAE--KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 633 ~~~~~~~~--~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
++...... ......++..|+|||......++.++|||||||++|||+||++||.......... ...... ...
T Consensus 158 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~---~~~~~~---~~~ 231 (294)
T 4eqm_A 158 AKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAI---KHIQDS---VPN 231 (294)
T ss_dssp STTC-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHH---HHHSSC---CCC
T ss_pred ccccccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHH---HHhhcc---CCC
Confidence 86553322 1223457889999999988889999999999999999999999998654332211 111110 000
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCC-CHHHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERP-SVEDVLWNLQ 754 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-t~~evl~~l~ 754 (786)
..+.... .....+.+++.+||++||++|| +++++.+.+.
T Consensus 232 -~~~~~~~----~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~ 271 (294)
T 4eqm_A 232 -VTTDVRK----DIPQSLSNVILRATEKDKANRYKTIQEMKDDLS 271 (294)
T ss_dssp -HHHHSCT----TSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHH
T ss_pred -cchhccc----CCCHHHHHHHHHHhcCCHhHccccHHHHHHHHH
Confidence 0011111 1224567788899999999999 7777776664
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-40 Score=360.56 Aligned_cols=274 Identities=19% Similarity=0.239 Sum_probs=208.8
Q ss_pred cCHHHHHHHhcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCC-----CCCcceeee
Q 003926 467 FSLEELEEATNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLR-----HRHLVSALG 540 (786)
Q Consensus 467 ~~~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-----H~NIv~l~g 540 (786)
+++++.....++|...+.||+|+||+||+|+. .+++.||||+++... ...+.+..|++++++++ |||||++++
T Consensus 25 ~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~ 103 (360)
T 3llt_A 25 FSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNIVKYHG 103 (360)
T ss_dssp CCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEE
T ss_pred eeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCeecccc
Confidence 44444445567899999999999999999996 468999999987432 23456888999999986 999999999
Q ss_pred eeeeccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeec
Q 003926 541 HCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD 620 (786)
Q Consensus 541 ~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld 620 (786)
++.. .+..++||||+ +|+|.+++.... ...+++.....++.|++.||+|||+. +|+||||||+|||++
T Consensus 104 ~~~~-------~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~ 171 (360)
T 3llt_A 104 KFMY-------YDHMCLIFEPL-GPSLYEIITRNN-YNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLD 171 (360)
T ss_dssp EEEE-------TTEEEEEECCC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEES
T ss_pred eeeE-------CCeeEEEEcCC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEc
Confidence 9875 45689999999 899999998643 23589999999999999999999997 999999999999998
Q ss_pred C-------------------------CCcccccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHH
Q 003926 621 Q-------------------------NLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLIL 675 (786)
Q Consensus 621 ~-------------------------~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl 675 (786)
. ++.+||+|||+++..... .....++..|+|||.+....++.++|||||||++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il 249 (360)
T 3llt_A 172 DPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY--HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVL 249 (360)
T ss_dssp CTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC--CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHH
T ss_pred cccccccccchhcccccccccccccCCCCEEEEeccCceecCCC--CcCccCcccccCcHHHcCCCCCCccchHHHHHHH
Confidence 6 788999999998754332 2344577889999999888999999999999999
Q ss_pred HHHHhCCCCCCCchhHHHHHHHHHHHHhcccc---------ccccccc-----cccccC-cH---------------HHH
Q 003926 676 LEIIVGRPLKSRKEVDLLKNQLQAVVTADESA---------RRSMVDP-----AVNKAC-LD---------------ESL 725 (786)
Q Consensus 676 ~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~d~-----~~~~~~-~~---------------~~~ 725 (786)
|||+||++||...........+.......... ....++. ..+... .. ...
T Consensus 250 ~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 329 (360)
T 3llt_A 250 AELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKH 329 (360)
T ss_dssp HHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCC
T ss_pred HHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchH
Confidence 99999999997655443333322221110000 0000000 000000 00 001
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 726 KTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 726 ~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
..+.+++.+||+.||++|||+.|+++|+||
T Consensus 330 ~~l~~li~~~L~~dP~~Rpta~elL~hp~f 359 (360)
T 3llt_A 330 ELFCDFLYSILQIDPTLRPSPAELLKHKFL 359 (360)
T ss_dssp HHHHHHHHHHCCSSGGGSCCHHHHTTSGGG
T ss_pred HHHHHHHHHHhcCChhhCCCHHHHhcCccc
Confidence 456789999999999999999999999875
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=348.69 Aligned_cols=262 Identities=17% Similarity=0.288 Sum_probs=200.6
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCC---hHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHS---TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~---~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
.++|+..+.||+|+||.||+|+. .+++.||||+++...... ...|.+|++++++++|||||++++++.... ..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~---~~ 87 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAET---PA 87 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEE---TT
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccC---CC
Confidence 35688889999999999999995 579999999998654333 356899999999999999999999886521 11
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
....|+||||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 88 ~~~~~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg 161 (311)
T 3ork_A 88 GPLPYIVMEYVDGVTLRDIVHTE---GPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFG 161 (311)
T ss_dssp EEEEEEEEECCCEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCS
T ss_pred CcccEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeecc
Confidence 23459999999999999999753 3589999999999999999999997 99999999999999999999999999
Q ss_pred ccccccccc----ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccc
Q 003926 632 LPLLAENAE----KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESA 707 (786)
Q Consensus 632 l~~~~~~~~----~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (786)
+++...... ......++..|+|||.+....++.++|||||||++|||+||+.||............ .....
T Consensus 162 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~---~~~~~-- 236 (311)
T 3ork_A 162 IARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQH---VREDP-- 236 (311)
T ss_dssp CC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH---HHCCC--
T ss_pred CcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH---hcCCC--
Confidence 986543221 122345688999999998889999999999999999999999999765543322111 11100
Q ss_pred ccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 708 RRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 708 ~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
........ .....+.+++.+||+.||++||++.+++.+.++...
T Consensus 237 ---~~~~~~~~----~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 280 (311)
T 3ork_A 237 ---IPPSARHE----GLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 280 (311)
T ss_dssp ---CCHHHHST----TCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred ---CCcccccC----CCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence 00000011 112356688889999999999999999998887653
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-40 Score=355.29 Aligned_cols=253 Identities=16% Similarity=0.296 Sum_probs=195.1
Q ss_pred cCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCC--CCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRH--RHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H--~NIv~l~g~~~~~~~~~~~~ 552 (786)
+.|+..+.||+|+||.||+|..++++.||||++...... ..+.|.+|++++++++| +||+++++++.. .
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~-------~ 81 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT-------D 81 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-------S
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEee-------C
Confidence 457888999999999999999888999999998755432 23678999999999987 999999999875 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..++||| +.+|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++ ++.+||+|||+
T Consensus 82 ~~~~lv~e-~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~ 153 (343)
T 3dbq_A 82 QYIYMVME-CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGI 153 (343)
T ss_dssp SEEEEEEC-CCSEEHHHHHHHS---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSS
T ss_pred CEEEEEEe-CCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeeccc
Confidence 57899999 5678999999863 3689999999999999999999997 999999999999997 56799999999
Q ss_pred ccccccccc---cccccccccccCcccccc-----------CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHH
Q 003926 633 PLLAENAEK---VGHVIPYSGSIDPTNSAR-----------GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQ 698 (786)
Q Consensus 633 ~~~~~~~~~---~~~~~~~~~~~aPe~~~~-----------~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~ 698 (786)
++....... .....++..|+|||.+.. ..++.++|||||||++|||++|++||....... . .+.
T Consensus 154 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~-~~~ 231 (343)
T 3dbq_A 154 ANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI-S-KLH 231 (343)
T ss_dssp SCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH-H-HHH
T ss_pred ccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHH-H-HHH
Confidence 975533221 223467889999998754 678999999999999999999999997532211 1 111
Q ss_pred HHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 699 AVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 699 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
...... . ....+... ...+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 232 ~~~~~~---~----~~~~~~~~----~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~ 279 (343)
T 3dbq_A 232 AIIDPN---H----EIEFPDIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 279 (343)
T ss_dssp HHHCTT---S----CCCCCCCS----CHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHS
T ss_pred HHhcCC---c----ccCCcccC----CHHHHHHHHHHcCCChhHCCCHHHHHhCccccc
Confidence 111100 0 00111111 134668888999999999999999999999874
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-40 Score=355.88 Aligned_cols=247 Identities=13% Similarity=0.212 Sum_probs=203.6
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCC--------ChHHHHHHHHHHhcCCCCCcceeeeeeeecc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCH--------STRNFMHHIELISKLRHRHLVSALGHCFECY 546 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~--------~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~ 546 (786)
.++|+..+.||+|+||.||+|+. .+|+.||||+++..... ..+.+.+|++++++++|||||++++++..
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~-- 100 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN-- 100 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC--
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee--
Confidence 46788899999999999999985 46899999999765321 23467889999999999999999999865
Q ss_pred ccCCCCceEEEEEecCCCC-ChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcc
Q 003926 547 FDDSSVSRIFLIFEYVPNG-TLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVA 625 (786)
Q Consensus 547 ~~~~~~~~~~LV~Ey~~~G-sL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~ 625 (786)
.+..++||||+.+| +|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+
T Consensus 101 -----~~~~~lv~e~~~~g~~l~~~~~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~ 169 (335)
T 3dls_A 101 -----QGFFQLVMEKHGSGLDLFAFIDRH---PRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTI 169 (335)
T ss_dssp -----SSEEEEEEECCTTSCBHHHHHHTC---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCE
T ss_pred -----CCEEEEEEEeCCCCccHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcE
Confidence 45789999999877 999999763 3589999999999999999999998 99999999999999999999
Q ss_pred cccCCCcccccccccccccccccccccCccccccCCC-CcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhc
Q 003926 626 KISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704 (786)
Q Consensus 626 kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~-t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 704 (786)
||+|||++.............++..|+|||.+....+ +.++|||||||++|||++|+.||......
T Consensus 170 kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------------- 236 (335)
T 3dls_A 170 KLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET------------- 236 (335)
T ss_dssp EECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-------------
T ss_pred EEeecccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-------------
Confidence 9999999976655444445567889999999887776 78999999999999999999999653210
Q ss_pred cccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 705 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
......+ +... ...+.+++.+||+.||++|||+.|+++|+|+.+
T Consensus 237 ---~~~~~~~--~~~~----~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~ 280 (335)
T 3dls_A 237 ---VEAAIHP--PYLV----SKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQ 280 (335)
T ss_dssp ---TTTCCCC--SSCC----CHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTC
T ss_pred ---HhhccCC--Cccc----CHHHHHHHHHHccCChhhCcCHHHHhcCccccC
Confidence 0000000 0111 234668888999999999999999999999865
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-39 Score=367.66 Aligned_cols=259 Identities=18% Similarity=0.266 Sum_probs=205.0
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC--CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK--CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.+.|+..+.||+|+||+||+|+.+ ++..||||++.... ......+.+|++++++++|||||+++++|.. .
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-------~ 108 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFED-------K 108 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEEC-------S
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-------C
Confidence 345888999999999999999965 68999999997653 2345789999999999999999999999865 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCC---CcccccC
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN---LVAKISS 629 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~---~~~kl~D 629 (786)
...|+|||||++|+|.+++... ..+++.....++.|++.||.|||+. +|+||||||+|||++.. +.+||+|
T Consensus 109 ~~~~lv~e~~~~g~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~D 182 (494)
T 3lij_A 109 RNYYLVMECYKGGELFDEIIHR---MKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVD 182 (494)
T ss_dssp SEEEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECC
T ss_pred CEEEEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEE
Confidence 5689999999999999988753 3589999999999999999999997 99999999999999764 4599999
Q ss_pred CCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 630 YNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 630 fGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
||++.............++..|+|||.+. +.|+.++||||+||++|||++|++||.......+...+... . .
T Consensus 183 fG~a~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~---~----~ 254 (494)
T 3lij_A 183 FGLSAVFENQKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKG---K----Y 254 (494)
T ss_dssp CTTCEECBTTBCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT---C----C
T ss_pred CCCCeECCCCccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC---C----C
Confidence 99997665544445567888999999875 57999999999999999999999999876554433322211 0 0
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~ 760 (786)
....+. .. .....+.+++.+||+.||.+|||+.|+++|+|+.+...
T Consensus 255 ~~~~~~-~~----~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~~~ 300 (494)
T 3lij_A 255 TFDSPE-WK----NVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCS 300 (494)
T ss_dssp CCCSGG-GT----TSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHHHH
T ss_pred CCCchh-cc----cCCHHHHHHHHHHCCCChhhCccHHHHhcCcccccCcc
Confidence 000111 11 11235668888999999999999999999999987543
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-40 Score=354.13 Aligned_cols=269 Identities=16% Similarity=0.270 Sum_probs=199.9
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCC-hHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHS-TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~-~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
++|...+.||+|+||+||+|+.. +++.||||+++...... ...+.+|++++++++|||||++++++.. .+.
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------~~~ 74 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHT-------EKS 74 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEEC-------SSC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEee-------CCE
Confidence 46788899999999999999965 78999999997544222 2346689999999999999999999865 456
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++||||++ |+|.+++.... ..+++.....++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 75 ~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~ 148 (324)
T 3mtl_A 75 LTLVFEYLD-KDLKQYLDDCG--NIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLAR 148 (324)
T ss_dssp EEEEEECCS-EEHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEE
T ss_pred EEEEecccc-cCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccc
Confidence 899999998 59999987642 3589999999999999999999997 99999999999999999999999999986
Q ss_pred ccccc-cccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHh-cccccccc
Q 003926 635 LAENA-EKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTA-DESARRSM 711 (786)
Q Consensus 635 ~~~~~-~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 711 (786)
..... .......++..|+|||.+.. ..++.++|||||||++|||++|++||...........+...... ....+...
T Consensus 149 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 228 (324)
T 3mtl_A 149 AKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGI 228 (324)
T ss_dssp CC------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTG
T ss_pred cccCCccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhh
Confidence 54322 22233456788999998765 56899999999999999999999999876554433333222211 11111111
Q ss_pred ccc---------cccc----cCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 712 VDP---------AVNK----ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 712 ~d~---------~~~~----~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
.+. .... .........+.+++.+||+.||++|||+.|+++|+||...
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~ 288 (324)
T 3mtl_A 229 LSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSL 288 (324)
T ss_dssp GGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGG
T ss_pred hcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhc
Confidence 100 0000 0001122456788899999999999999999999998754
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-39 Score=339.36 Aligned_cols=254 Identities=18% Similarity=0.299 Sum_probs=199.1
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|...+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.. .
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~ 83 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIST-------P 83 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-------S
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEec-------C
Confidence 56788899999999999999975 79999999987542 2345689999999999999999999998865 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..++||||+++|+|.+++... ..+++.....++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 84 ~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~ 157 (276)
T 2h6d_A 84 TDFFMVMEYVSGGELFDYICKH---GRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGL 157 (276)
T ss_dssp SEEEEEEECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCG
T ss_pred CeEEEEEeccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeeccc
Confidence 5689999999999999999753 3589999999999999999999997 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCccccccCCC-CcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~-t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
+.............++..|+|||......+ +.++||||||+++|||++|+.||...........+.. .. .
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~----~~---~-- 228 (276)
T 2h6d_A 158 SNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRG----GV---F-- 228 (276)
T ss_dssp GGCCCC-------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH----CC---C--
T ss_pred ccccCCCcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhc----Cc---c--
Confidence 876544333334456778999999877655 6899999999999999999999976554433222211 10 0
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQV 759 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~ 759 (786)
..+... ...+.+++.+||+.||++|||+.|+++|+|+.+..
T Consensus 229 ---~~~~~~----~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~~ 269 (276)
T 2h6d_A 229 ---YIPEYL----NRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDL 269 (276)
T ss_dssp ---CCCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTTC
T ss_pred ---cCchhc----CHHHHHHHHHHccCChhhCCCHHHHHhChhhccCc
Confidence 011111 23466788899999999999999999999987543
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-39 Score=353.33 Aligned_cols=251 Identities=18% Similarity=0.320 Sum_probs=199.8
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCC---ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCH---STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~---~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
+.|+..+.||+|+||.||+|+. .+|+.||||++...... ..+.|.+|++++++++|||||++++++.. .
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-------~ 126 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-------E 126 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-------T
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-------C
Confidence 4477889999999999999995 57999999999754332 23578999999999999999999999875 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..++||||++ |+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 127 ~~~~lv~e~~~-g~l~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~ 200 (348)
T 1u5q_A 127 HTAWLVMEYCL-GSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGS 200 (348)
T ss_dssp TEEEEEEECCS-EEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTT
T ss_pred CeEEEEEecCC-CCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccC
Confidence 57899999998 6888888642 24689999999999999999999998 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCccccc---cCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSA---RGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~---~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
+...... ....++..|+|||.+. .+.++.++|||||||++|||++|++||.......... ...... ..
T Consensus 201 a~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~---~~~~~~---~~ 271 (348)
T 1u5q_A 201 ASIMAPA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY---HIAQNE---SP 271 (348)
T ss_dssp CBSSSSB---CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH---HHHHSC---CC
T ss_pred ceecCCC---CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH---HHHhcC---CC
Confidence 8655432 2345778899999874 5678999999999999999999999987644322111 111111 01
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
... ...++ ..+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 272 ~~~----~~~~~----~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~ 311 (348)
T 1u5q_A 272 ALQ----SGHWS----EYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR 311 (348)
T ss_dssp CCC----CTTSC----HHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHS
T ss_pred CCC----CCCCC----HHHHHHHHHHcccChhhCcCHHHHhhChhhhc
Confidence 110 11122 34567888999999999999999999999754
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-39 Score=355.64 Aligned_cols=253 Identities=16% Similarity=0.268 Sum_probs=197.0
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHHHHHH-HhcCCCCCcceeeeeeeeccccCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIEL-ISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~-l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
.++|+..+.||+|+||+||+|+.+ +++.||||+++.... ...+.+.+|..+ ++.++|||||++++++..
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~------ 110 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT------ 110 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEEC------
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEe------
Confidence 357888999999999999999975 589999999976542 223557778776 577899999999998865
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
.+..|+||||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 111 -~~~~~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DF 183 (373)
T 2r5t_A 111 -ADKLYFVLDYINGGELFYHLQRE---RCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDF 183 (373)
T ss_dssp -SSEEEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC
T ss_pred -CCEEEEEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeC
Confidence 45789999999999999999753 3588899999999999999999997 9999999999999999999999999
Q ss_pred Ccccccc-cccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 631 NLPLLAE-NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 631 Gl~~~~~-~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
|+++... .........++..|+|||.+....|+.++|||||||++|||++|++||...+.......+. ...
T Consensus 184 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~---~~~----- 255 (373)
T 2r5t_A 184 GLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL---NKP----- 255 (373)
T ss_dssp CBCGGGBCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHH---HSC-----
T ss_pred ccccccccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH---hcc-----
Confidence 9987532 2233345678889999999988889999999999999999999999997765443322221 111
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCH----HHHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSV----EDVLWNLQFAA 757 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~----~evl~~l~~~~ 757 (786)
........ ..+.+++.+||+.||++||++ .|+.+|.||..
T Consensus 256 ----~~~~~~~~----~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~ 299 (373)
T 2r5t_A 256 ----LQLKPNIT----NSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSL 299 (373)
T ss_dssp ----CCCCSSSC----HHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTT
T ss_pred ----cCCCCCCC----HHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccC
Confidence 00111111 346678889999999999997 68888988764
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-39 Score=339.34 Aligned_cols=251 Identities=19% Similarity=0.359 Sum_probs=191.2
Q ss_pred cCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCC----CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKC----HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~----~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|+..+.||+|+||.||+|+.. |..||||+++.... ...+.+.+|++++++++||||+++++++.. .
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~ 78 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLK-------E 78 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECC-------C
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec-------C
Confidence 56778899999999999999975 88999999875432 234679999999999999999999999865 3
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC--------CCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ--------NLV 624 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~--------~~~ 624 (786)
+..++||||+++|+|.+++.. ..+++.....++.|+++||.|||+....+|+||||||+||+++. ++.
T Consensus 79 ~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~ 154 (271)
T 3dtc_A 79 PNLCLVMEFARGGPLNRVLSG----KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKI 154 (271)
T ss_dssp --CEEEEECCTTEEHHHHHTS----SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCC
T ss_pred CceEEEEEcCCCCCHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcc
Confidence 468999999999999999964 36899999999999999999999973233999999999999986 678
Q ss_pred ccccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhc
Q 003926 625 AKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704 (786)
Q Consensus 625 ~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 704 (786)
+||+|||++........ ....++..|+|||......++.++||||||+++|||++|+.||............. ..
T Consensus 155 ~kl~Dfg~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~---~~- 229 (271)
T 3dtc_A 155 LKITDFGLAREWHRTTK-MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVA---MN- 229 (271)
T ss_dssp EEECCCCC--------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHH---TS-
T ss_pred eEEccCCcccccccccc-cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhh---cC-
Confidence 99999999865543222 23456788999999988889999999999999999999999997654332221111 00
Q ss_pred cccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 705 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
. ........++ ..+.+++.+||+.||++|||+.|+++++.
T Consensus 230 --~----~~~~~~~~~~----~~~~~li~~~l~~~p~~Rps~~e~l~~L~ 269 (271)
T 3dtc_A 230 --K----LALPIPSTCP----EPFAKLMEDCWNPDPHSRPSFTNILDQLT 269 (271)
T ss_dssp --C----CCCCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --C----CCCCCCcccC----HHHHHHHHHHhcCCcccCcCHHHHHHHHh
Confidence 0 0111111222 35678888999999999999999999985
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-39 Score=367.49 Aligned_cols=257 Identities=18% Similarity=0.268 Sum_probs=209.0
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
+.|+..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++.. .
T Consensus 26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-------~ 98 (484)
T 3nyv_A 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFED-------K 98 (484)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-------S
T ss_pred CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEe-------C
Confidence 45788899999999999999965 79999999996543 2346789999999999999999999999865 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceee---cCCCcccccC
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL---DQNLVAKISS 629 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILl---d~~~~~kl~D 629 (786)
+..++||||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|
T Consensus 99 ~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~D 172 (484)
T 3nyv_A 99 GYFYLVGEVYTGGELFDEIISR---KRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIID 172 (484)
T ss_dssp SEEEEEECCCCSCBHHHHHHTC---SCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECC
T ss_pred CEEEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEe
Confidence 5789999999999999999753 3589999999999999999999998 99999999999999 5678899999
Q ss_pred CCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 630 YNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 630 fGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
||++.............++..|+|||.+.. .|+.++||||+||++|||++|++||...........+.. .. .
T Consensus 173 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~---~~---~- 244 (484)
T 3nyv_A 173 FGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK---GK---Y- 244 (484)
T ss_dssp TTHHHHBCCCCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---CC---C-
T ss_pred eeeeEEcccccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc---CC---C-
Confidence 999976655444445568889999998754 799999999999999999999999987655443332221 10 0
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQV 759 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~ 759 (786)
....+. .......+.+++.+||+.||++|||+.|+++|+|+....
T Consensus 245 ~~~~~~-----~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~~ 289 (484)
T 3nyv_A 245 TFELPQ-----WKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYT 289 (484)
T ss_dssp CCCSGG-----GGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHHT
T ss_pred CCCCcc-----cccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhcccc
Confidence 000011 111223567888899999999999999999999987643
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-39 Score=367.87 Aligned_cols=259 Identities=18% Similarity=0.258 Sum_probs=207.1
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|...+.||+|+||.||+|+.+ +|+.||||++.... ....+.+.+|++++++++|||||++++++.. .
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~-------~ 257 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFET-------K 257 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-------S
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEee-------C
Confidence 67888899999999999999975 69999999997542 2345779999999999999999999998764 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCC-CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHA-HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~-~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
+..|+||||+++|+|.+++..... ...+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 258 ~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFG 334 (543)
T 3c4z_A 258 TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLG 334 (543)
T ss_dssp SEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCT
T ss_pred CEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecc
Confidence 568999999999999999975422 34689999999999999999999997 99999999999999999999999999
Q ss_pred cccccccccc-cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhH-HHHHHHHHHHHhcccccc
Q 003926 632 LPLLAENAEK-VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVD-LLKNQLQAVVTADESARR 709 (786)
Q Consensus 632 l~~~~~~~~~-~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~~ 709 (786)
+++....... .....++..|+|||.+....|+.++|||||||++|||+||++||...... .............
T Consensus 335 la~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~----- 409 (543)
T 3c4z_A 335 LAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQA----- 409 (543)
T ss_dssp TCEECCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCC-----
T ss_pred eeeeccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcc-----
Confidence 9976543322 23347889999999998888999999999999999999999999754211 1111111111111
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCH-----HHHHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSV-----EDVLWNLQFAAQ 758 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~-----~evl~~l~~~~~ 758 (786)
...+. .....+.+++.+||+.||++||++ .||++|+||...
T Consensus 410 ----~~~p~----~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i 455 (543)
T 3c4z_A 410 ----VTYPD----KFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI 455 (543)
T ss_dssp ----CCCCT----TSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTC
T ss_pred ----cCCCc----ccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCC
Confidence 00111 112356678889999999999964 899999998753
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-39 Score=358.18 Aligned_cols=278 Identities=16% Similarity=0.212 Sum_probs=203.2
Q ss_pred HHHhcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeecccc---
Q 003926 473 EEATNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFD--- 548 (786)
Q Consensus 473 ~~~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~--- 548 (786)
+...++|...+.||+|+||+||+|+. .+|+.||||++..... .+.+|++++++++|||||++++++......
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 34567899999999999999999985 5799999999865432 234799999999999999999998642210
Q ss_pred ----------------------------CCCCceEEEEEecCCCCChhHHhhcC-CCCCCCCHHHHHHHHHHHHHHhhhh
Q 003926 549 ----------------------------DSSVSRIFLIFEYVPNGTLRSWISEG-HAHQSLTWTQRISAAIGVAKGIQFL 599 (786)
Q Consensus 549 ----------------------------~~~~~~~~LV~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~ia~~ia~gL~yL 599 (786)
.......++||||++ |+|.+.+... .....+++.....++.|+++||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 022345889999998 5888777531 1234689999999999999999999
Q ss_pred hcCCCCCccccCCCCCceeec-CCCcccccCCCcccccccccccccccccccccCccccccC-CCCcccceeehhHHHHH
Q 003926 600 HTGIVPGVFSNNLKITDILLD-QNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLE 677 (786)
Q Consensus 600 H~~~~~~ivHrdlk~~NILld-~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~E 677 (786)
|+. +|+||||||+||+++ .++.+||+|||+++............++..|+|||.+.+. .++.++||||+||++||
T Consensus 158 H~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e 234 (383)
T 3eb0_A 158 HSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGE 234 (383)
T ss_dssp HTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHH
T ss_pred HHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHH
Confidence 997 999999999999998 6889999999999766544444455677889999987654 48999999999999999
Q ss_pred HHhCCCCCCCchh-HHHHHHHHHHHHhcccc-------ccccccccccc-----cCcHHHHHHHHHHHHHhccCCCCCCC
Q 003926 678 IIVGRPLKSRKEV-DLLKNQLQAVVTADESA-------RRSMVDPAVNK-----ACLDESLKTMMEVCVRCLLKNPAERP 744 (786)
Q Consensus 678 lltG~~p~~~~~~-~~~~~~~~~~~~~~~~~-------~~~~~d~~~~~-----~~~~~~~~~~~~l~~~Cl~~dP~~RP 744 (786)
|++|++||..... +.+...+.......... .....-+.... ..+......+.+++.+||+.||++||
T Consensus 235 ll~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ 314 (383)
T 3eb0_A 235 LILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRI 314 (383)
T ss_dssp HHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSC
T ss_pred HHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCC
Confidence 9999999986543 33333322211110000 00000011000 01111234577889999999999999
Q ss_pred CHHHHHHHHHHHHH
Q 003926 745 SVEDVLWNLQFAAQ 758 (786)
Q Consensus 745 t~~evl~~l~~~~~ 758 (786)
|+.|+++|+||...
T Consensus 315 t~~e~l~hp~f~~~ 328 (383)
T 3eb0_A 315 NPYEAMAHPFFDHL 328 (383)
T ss_dssp CHHHHHTSGGGHHH
T ss_pred CHHHHhcCHHHHHH
Confidence 99999999998764
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-38 Score=336.81 Aligned_cols=250 Identities=21% Similarity=0.415 Sum_probs=196.7
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCC-------hHHHHHHHHHHhcCCCCCcceeeeeeeecccc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHS-------TRNFMHHIELISKLRHRHLVSALGHCFECYFD 548 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~-------~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~ 548 (786)
++|+..+.||+|+||.||+|+. .+++.||||++....... .+.|.+|++++++++||||+++++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---- 94 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN---- 94 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETT----
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecC----
Confidence 5678889999999999999996 478999999987544322 1679999999999999999999998753
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCC--ccccCCCCCceeecCCCc--
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPG--VFSNNLKITDILLDQNLV-- 624 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~--ivHrdlk~~NILld~~~~-- 624 (786)
..++||||+++|+|.+++.+. ...+++..+..++.|++.||+|||+. + |+||||||+||+++.++.
T Consensus 95 -----~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~ 164 (287)
T 4f0f_A 95 -----PPRMVMEFVPCGDLYHRLLDK--AHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENA 164 (287)
T ss_dssp -----TTEEEEECCTTCBHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTC
T ss_pred -----CCeEEEEecCCCCHHHHHhcc--cCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCC
Confidence 237999999999999998753 24699999999999999999999997 6 999999999999988776
Q ss_pred ---ccccCCCcccccccccccccccccccccCcccc--ccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHH
Q 003926 625 ---AKISSYNLPLLAENAEKVGHVIPYSGSIDPTNS--ARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQA 699 (786)
Q Consensus 625 ---~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~--~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~ 699 (786)
+||+|||+++.... ......++..|+|||.+ ....++.++|||||||++|||++|+.||........... ..
T Consensus 165 ~~~~kl~Dfg~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~-~~ 241 (287)
T 4f0f_A 165 PVCAKVADFGLSQQSVH--SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFI-NM 241 (287)
T ss_dssp SCCEEECCCTTCBCCSS--CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHH-HH
T ss_pred ceeEEeCCCCccccccc--cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHH-HH
Confidence 99999999864432 22334577889999987 345578999999999999999999999976443222111 11
Q ss_pred HHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 700 VVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 700 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
..... ..+.....++ ..+.+++.+||+.||++|||+.||++.+.
T Consensus 242 ~~~~~-------~~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 285 (287)
T 4f0f_A 242 IREEG-------LRPTIPEDCP----PRLRNVIELCWSGDPKKRPHFSYIVKELS 285 (287)
T ss_dssp HHHSC-------CCCCCCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HhccC-------CCCCCCcccC----HHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 11110 1111222222 35678888999999999999999999885
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-39 Score=360.96 Aligned_cols=257 Identities=19% Similarity=0.287 Sum_probs=195.1
Q ss_pred HhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC--------CChHHHHHHHHHHhcCCCCCcceeeeeeeec
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC--------HSTRNFMHHIELISKLRHRHLVSALGHCFEC 545 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--------~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~ 545 (786)
..++|...+.||+|+||.||+|+.. +++.||||++..... .....|.+|++++++++|||||++++++..
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~- 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA- 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence 4578999999999999999999864 689999999875431 112358899999999999999999998742
Q ss_pred cccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCC---
Q 003926 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN--- 622 (786)
Q Consensus 546 ~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~--- 622 (786)
+..++|||||++|+|.+++... ..+++.....++.|+++||+|||+. +|+||||||+|||++.+
T Consensus 212 -------~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~ 278 (419)
T 3i6u_A 212 -------EDYYIVLELMEGGELFDKVVGN---KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEED 278 (419)
T ss_dssp -------SEEEEEEECCTTCBGGGGTSSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSS
T ss_pred -------CceEEEEEcCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCc
Confidence 4579999999999999998753 3689999999999999999999997 99999999999999754
Q ss_pred CcccccCCCcccccccccccccccccccccCccccc---cCCCCcccceeehhHHHHHHHhCCCCCCCchh-HHHHHHHH
Q 003926 623 LVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSA---RGKLEEKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQ 698 (786)
Q Consensus 623 ~~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~---~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~-~~~~~~~~ 698 (786)
..+||+|||+++............++..|+|||.+. ...|+.++|||||||++|||+||++||..... ..+...+.
T Consensus 279 ~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~ 358 (419)
T 3i6u_A 279 CLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT 358 (419)
T ss_dssp CCEEECCSSTTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHH
T ss_pred ceEEEeecccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHh
Confidence 459999999997765444444566788999999875 35688999999999999999999999975322 12222111
Q ss_pred HHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 699 AVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 699 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
. .. .. ..+.... .....+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 359 ~----~~---~~-~~~~~~~----~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~ 405 (419)
T 3i6u_A 359 S----GK---YN-FIPEVWA----EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 405 (419)
T ss_dssp T----TC---CC-CCHHHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred c----CC---CC-CCchhhc----ccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCC
Confidence 1 00 00 0111111 12235678889999999999999999999999754
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-39 Score=352.19 Aligned_cols=261 Identities=19% Similarity=0.344 Sum_probs=207.1
Q ss_pred HHHHHhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCC--------hHHHHHHHHHHhcC-CCCCcceeee
Q 003926 471 ELEEATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHS--------TRNFMHHIELISKL-RHRHLVSALG 540 (786)
Q Consensus 471 ~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~--------~~~f~~E~~~l~~l-~H~NIv~l~g 540 (786)
......++|+..+.||+|+||.||+|+.. +|+.||||++....... .+.+.+|+++++++ +||||+++++
T Consensus 88 ~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 167 (365)
T 2y7j_A 88 AAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLID 167 (365)
T ss_dssp HHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred hhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEE
Confidence 33445567999999999999999999975 79999999987543211 34688999999999 7999999999
Q ss_pred eeeeccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeec
Q 003926 541 HCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD 620 (786)
Q Consensus 541 ~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld 620 (786)
++.. .+..++||||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++
T Consensus 168 ~~~~-------~~~~~lv~e~~~g~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~ 234 (365)
T 2y7j_A 168 SYES-------SSFMFLVFDLMRKGELFDYLTEK---VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLD 234 (365)
T ss_dssp EEEB-------SSEEEEEECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC
T ss_pred EEee-------CCEEEEEEEeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEC
Confidence 8865 45789999999999999999753 3589999999999999999999997 999999999999999
Q ss_pred CCCcccccCCCcccccccccccccccccccccCcccccc------CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHH
Q 003926 621 QNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSAR------GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLK 694 (786)
Q Consensus 621 ~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~------~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~ 694 (786)
.++.+||+|||++.............++..|+|||.+.. ..++.++|||||||++|||++|++||.........
T Consensus 235 ~~~~ikl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~ 314 (365)
T 2y7j_A 235 DNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILML 314 (365)
T ss_dssp TTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred CCCCEEEEecCcccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHH
Confidence 999999999999876654444455667889999998753 35889999999999999999999999765433322
Q ss_pred HHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 695 NQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
..+.. .. .....+.. .. ....+.+++.+||+.||++|||+.|+++|+||.
T Consensus 315 ~~i~~---~~----~~~~~~~~-~~----~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~ 364 (365)
T 2y7j_A 315 RMIME---GQ----YQFSSPEW-DD----RSSTVKDLISRLLQVDPEARLTAEQALQHPFFE 364 (365)
T ss_dssp HHHHH---TC----CCCCHHHH-SS----SCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGC
T ss_pred HHHHh---CC----CCCCCccc-cc----CCHHHHHHHHHHcCCChhHCcCHHHHhcCcccC
Confidence 22111 00 00000100 11 123567888899999999999999999999863
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-40 Score=352.07 Aligned_cols=269 Identities=19% Similarity=0.286 Sum_probs=196.5
Q ss_pred HhcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
..++|...+.||+|+||+||+|+. .+|+.||||+++..... ..+.+.+|++++++++|||||++++++..
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------- 104 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHH------- 104 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEE-------
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEec-------
Confidence 456788999999999999999985 47999999999755432 24568899999999999999999999875
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceee-----cCCCccc
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL-----DQNLVAK 626 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILl-----d~~~~~k 626 (786)
.+..++||||++ |+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||+ ++++.+|
T Consensus 105 ~~~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~k 177 (329)
T 3gbz_A 105 NHRLHLIFEYAE-NDLKKYMDKN---PDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLK 177 (329)
T ss_dssp TTEEEEEEECCS-EEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEE
T ss_pred CCEEEEEEecCC-CCHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEE
Confidence 457899999998 5999999763 3589999999999999999999997 99999999999999 5556699
Q ss_pred ccCCCcccccccc-cccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCchhHH-HHHHHHHHHHh
Q 003926 627 ISSYNLPLLAENA-EKVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL-LKNQLQAVVTA 703 (786)
Q Consensus 627 l~DfGl~~~~~~~-~~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~-~~~~~~~~~~~ 703 (786)
|+|||+++..... .......++..|+|||.+... .++.++|||||||++|||++|++||....... +..........
T Consensus 178 l~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~ 257 (329)
T 3gbz_A 178 IGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLP 257 (329)
T ss_dssp ECCTTHHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCC
T ss_pred ECcCCCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCC
Confidence 9999998655322 222334567889999998764 48999999999999999999999997654433 22222211111
Q ss_pred ccccccccc--------cccccccCcH-----HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 704 DESARRSMV--------DPAVNKACLD-----ESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 704 ~~~~~~~~~--------d~~~~~~~~~-----~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
....+.... .+........ .....+.+++.+||+.||++|||+.|+++|+||..
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~ 324 (329)
T 3gbz_A 258 DDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSH 324 (329)
T ss_dssp CTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSS
T ss_pred chhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCC
Confidence 100000000 0000000001 12245678889999999999999999999998753
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-39 Score=364.86 Aligned_cols=257 Identities=18% Similarity=0.264 Sum_probs=205.4
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC--CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK--CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.+.|+..+.||+|+||+||+|+.. +|+.||||++.... ......+.+|++++++++|||||++++++.. .
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-------~ 93 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED-------S 93 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-------S
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEc-------C
Confidence 345888999999999999999965 79999999986542 3446789999999999999999999999865 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeec---CCCcccccC
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD---QNLVAKISS 629 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld---~~~~~kl~D 629 (786)
...++|||||++|+|.+++... ..+++.....++.|++.||.|||+. +|+||||||+|||++ .++.+||+|
T Consensus 94 ~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~D 167 (486)
T 3mwu_A 94 SSFYIVGELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIID 167 (486)
T ss_dssp SEEEEEECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECS
T ss_pred CEEEEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEE
Confidence 5789999999999999988753 3589999999999999999999998 999999999999995 456799999
Q ss_pred CCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 630 YNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 630 fGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
||+++............++..|+|||.+.. .|+.++||||+||++|||++|++||...........+.. ...
T Consensus 168 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~---~~~---- 239 (486)
T 3mwu_A 168 FGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVET---GKY---- 239 (486)
T ss_dssp CSCTTTBCCC----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---TCC----
T ss_pred CCcCeECCCCCccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh---CCC----
Confidence 999976654444445568889999998764 699999999999999999999999977654433322221 100
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
....+. .......+.+++.+||+.||++|||+.|+++|+|+...
T Consensus 240 ~~~~~~-----~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~ 283 (486)
T 3mwu_A 240 AFDLPQ-----WRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283 (486)
T ss_dssp CSCSGG-----GGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHT
T ss_pred CCCCcc-----cCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccC
Confidence 000011 11122356688889999999999999999999998753
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-40 Score=353.78 Aligned_cols=256 Identities=16% Similarity=0.225 Sum_probs=199.8
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCCCCc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
.++|+..+.||+|+||.||+|+.+ +|+.||||+++.... .+.+|++++.++ +|||||++++++.+ .+
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~-------~~ 89 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDD-------GK 89 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEEC-------SS
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEc-------CC
Confidence 456888999999999999999965 689999999976543 245788888887 79999999998864 46
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCC----CcccccC
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN----LVAKISS 629 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~----~~~kl~D 629 (786)
..|+|||||++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||+..+ +.+||+|
T Consensus 90 ~~~lv~E~~~gg~L~~~i~~~---~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~D 163 (342)
T 2qr7_A 90 YVYVVTELMKGGELLDKILRQ---KFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICD 163 (342)
T ss_dssp EEEEEECCCCSCBHHHHHHTC---TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECC
T ss_pred EEEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEE
Confidence 789999999999999999763 3589999999999999999999998 99999999999998433 3599999
Q ss_pred CCcccccccc-cccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccc
Q 003926 630 YNLPLLAENA-EKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESAR 708 (786)
Q Consensus 630 fGl~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (786)
||+++..... .......++..|+|||.+....|+.++|||||||++|||++|++||.....+..............
T Consensus 164 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~--- 240 (342)
T 2qr7_A 164 FGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKF--- 240 (342)
T ss_dssp CTTCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCC---
T ss_pred CCCcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCc---
Confidence 9998755332 223345678899999998877789999999999999999999999975332222222222211110
Q ss_pred cccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 709 RSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 709 ~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
. .... ........+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 241 -~-~~~~----~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~ 283 (342)
T 2qr7_A 241 -S-LSGG----YWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVH 283 (342)
T ss_dssp -C-CCST----TTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHT
T ss_pred -c-cCcc----ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecC
Confidence 0 0000 11112235668888999999999999999999999853
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-39 Score=342.87 Aligned_cols=255 Identities=18% Similarity=0.323 Sum_probs=203.1
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
++|...+.||+|+||.||+|+.. +|+.||||+++.......+.+.+|++++++++||||+++++++.. .+..
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~~~ 81 (304)
T 2jam_A 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYES-------TTHY 81 (304)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEEC-------SSEE
T ss_pred ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhccc-------CCEE
Confidence 45778899999999999999965 799999999986554445679999999999999999999998865 4568
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceee---cCCCcccccCCCc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL---DQNLVAKISSYNL 632 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILl---d~~~~~kl~DfGl 632 (786)
++||||+++|+|.+++... ..+++.....++.|++.||.|||+. +|+||||||+||++ +.++.+||+|||+
T Consensus 82 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~ 155 (304)
T 2jam_A 82 YLVMQLVSGGELFDRILER---GVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGL 155 (304)
T ss_dssp EEEECCCCSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCST
T ss_pred EEEEEcCCCccHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCc
Confidence 9999999999999998753 3589999999999999999999997 99999999999999 7889999999999
Q ss_pred ccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
+...... ......++..|+|||......++.++|||||||++|||++|++||...........+.. .. ...
T Consensus 156 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~---~~----~~~- 226 (304)
T 2jam_A 156 SKMEQNG-IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKE---GY----YEF- 226 (304)
T ss_dssp TCCCCCB-TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH---CC----CCC-
T ss_pred ceecCCC-ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc---CC----CCC-
Confidence 8654332 22234567889999999888899999999999999999999999976544333222211 10 000
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
..... ......+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 227 ~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~ 267 (304)
T 2jam_A 227 ESPFW----DDISESAKDFICHLLEKDPNERYTCEKALSHPWIDG 267 (304)
T ss_dssp CTTTT----TTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHS
T ss_pred Ccccc----ccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccccC
Confidence 11111 112235678888999999999999999999999864
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-39 Score=347.33 Aligned_cols=259 Identities=16% Similarity=0.247 Sum_probs=195.9
Q ss_pred cCCCc-cCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCCCCc
Q 003926 477 NNFDT-SAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 477 ~~f~~-~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
+.|.. .+.||+|+||.||+|+. .+++.||||++........+.+.+|++++.++ +||||+++++++.. .+
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~-------~~ 84 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEE-------ED 84 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-------TT
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEee-------CC
Confidence 34666 37899999999999995 47999999999876555678899999999985 79999999999875 45
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCc---ccccCC
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV---AKISSY 630 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~---~kl~Df 630 (786)
..++||||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+||+++.++. +||+||
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Df 158 (316)
T 2ac3_A 85 RFYLVFEKMRGGSILSHIHKR---RHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDF 158 (316)
T ss_dssp EEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCT
T ss_pred EEEEEEEcCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEc
Confidence 789999999999999999763 3589999999999999999999998 9999999999999998776 899999
Q ss_pred Cccccccccc--------ccccccccccccCcccccc-----CCCCcccceeehhHHHHHHHhCCCCCCCchhHH-----
Q 003926 631 NLPLLAENAE--------KVGHVIPYSGSIDPTNSAR-----GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL----- 692 (786)
Q Consensus 631 Gl~~~~~~~~--------~~~~~~~~~~~~aPe~~~~-----~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~----- 692 (786)
|++....... ......++..|+|||.+.. ..++.++|||||||++|||++|++||.......
T Consensus 159 g~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~ 238 (316)
T 2ac3_A 159 DLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDR 238 (316)
T ss_dssp TCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC--
T ss_pred cCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccc
Confidence 9986442111 1122347788999998764 458899999999999999999999986532110
Q ss_pred -------HHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 693 -------LKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 693 -------~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
........ .... ....++ ... .....+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 239 ~~~~~~~~~~~~~~i-~~~~---~~~~~~-~~~----~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~ 301 (316)
T 2ac3_A 239 GEACPACQNMLFESI-QEGK---YEFPDK-DWA----HISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQG 301 (316)
T ss_dssp --CCHHHHHHHHHHH-HHCC---CCCCHH-HHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC-
T ss_pred cccchhHHHHHHHHH-hccC---cccCch-hcc----cCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcC
Confidence 00011111 1100 000000 000 11235678889999999999999999999998654
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-39 Score=358.50 Aligned_cols=253 Identities=16% Similarity=0.294 Sum_probs=195.9
Q ss_pred cCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCC--ChHHHHHHHHHHhcCC--CCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCH--STRNFMHHIELISKLR--HRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~--H~NIv~l~g~~~~~~~~~~~~ 552 (786)
..|+..+.||+|+||.||+|...+++.||||++...... ..+.|.+|++++++++ |||||++++++.. .
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~-------~ 128 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT-------D 128 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-------S
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEec-------C
Confidence 358888999999999999999888999999999765432 3467999999999996 5999999998875 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..|+||| +.+|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++ ++.+||+|||+
T Consensus 129 ~~~~lv~E-~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~ 200 (390)
T 2zmd_A 129 QYIYMVME-CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGI 200 (390)
T ss_dssp SEEEEEEE-CCSEEHHHHHHHC---SSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSS
T ss_pred CEEEEEEe-cCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCc
Confidence 56899999 5688999999864 3689999999999999999999997 999999999999996 57899999999
Q ss_pred ccccccccc---cccccccccccCcccccc-----------CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHH
Q 003926 633 PLLAENAEK---VGHVIPYSGSIDPTNSAR-----------GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQ 698 (786)
Q Consensus 633 ~~~~~~~~~---~~~~~~~~~~~aPe~~~~-----------~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~ 698 (786)
++....... .....++..|+|||.+.. ..++.++|||||||++|||++|++||....... ..+.
T Consensus 201 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~--~~~~ 278 (390)
T 2zmd_A 201 ANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI--SKLH 278 (390)
T ss_dssp SCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH--HHHH
T ss_pred cccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHH--HHHH
Confidence 976543221 233467889999998754 368999999999999999999999997532111 1111
Q ss_pred HHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 699 AVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 699 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
...... . ....+... ...+.+++.+||+.||++|||+.||++|+|+..
T Consensus 279 ~~~~~~---~----~~~~~~~~----~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~ 326 (390)
T 2zmd_A 279 AIIDPN---H----EIEFPDIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 326 (390)
T ss_dssp HHHCTT---S----CCCCCCCS----CHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHS
T ss_pred HHhCcc---c----cCCCCccc----hHHHHHHHHHHcccChhhCCCHHHHhhCcCccc
Confidence 111110 0 00011111 235668888999999999999999999999864
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-39 Score=365.39 Aligned_cols=273 Identities=18% Similarity=0.289 Sum_probs=190.0
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
++|+..+.||+|+||+||+|+.. +|+.||||++...... ..+.+.+|+++|++++|||||++++++..... ....
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--~~~~ 130 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDV--EKFD 130 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCT--TTCC
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCc--ccCc
Confidence 57889999999999999999854 6899999999754322 24679999999999999999999999864221 2235
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..|+||||+. |+|.+++... ..+++.....++.|++.||.|||+. +||||||||+|||++.++.+||+|||++
T Consensus 131 ~~~lv~e~~~-~~L~~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla 203 (458)
T 3rp9_A 131 ELYVVLEIAD-SDFKKLFRTP---VYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLA 203 (458)
T ss_dssp CEEEEECCCS-EEHHHHHHSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEeccc-cchhhhcccC---CCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccc
Confidence 6899999985 7999999753 3699999999999999999999997 9999999999999999999999999999
Q ss_pred ccccccc----------------------------ccccccccccccCcccc-ccCCCCcccceeehhHHHHHHHh----
Q 003926 634 LLAENAE----------------------------KVGHVIPYSGSIDPTNS-ARGKLEEKIDIYDFGLILLEIIV---- 680 (786)
Q Consensus 634 ~~~~~~~----------------------------~~~~~~~~~~~~aPe~~-~~~~~t~ksDVwSfGvvl~Ellt---- 680 (786)
+...... ......++..|+|||.+ ....|+.++|||||||++|||+|
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~ 283 (458)
T 3rp9_A 204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKE 283 (458)
T ss_dssp BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTT
T ss_pred hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccc
Confidence 7653211 12234567889999975 45669999999999999999999
Q ss_pred -------CCCCCCCchh---------------------HHHHHHHHHHHHhccccccc-----------cccc---cccc
Q 003926 681 -------GRPLKSRKEV---------------------DLLKNQLQAVVTADESARRS-----------MVDP---AVNK 718 (786)
Q Consensus 681 -------G~~p~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~-----------~~d~---~~~~ 718 (786)
|+++|.+... +.+..+.............. .... ....
T Consensus 284 ~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (458)
T 3rp9_A 284 NVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLA 363 (458)
T ss_dssp TCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGG
T ss_pred cccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHH
Confidence 6666644321 11111111100000000000 0000 0000
Q ss_pred cCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 719 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 719 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
.........+.+++.+||+.||++|||+.|+++|+||...
T Consensus 364 ~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~ 403 (458)
T 3rp9_A 364 ERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEV 403 (458)
T ss_dssp GGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred HHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhc
Confidence 0111123457789999999999999999999999998764
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-39 Score=341.47 Aligned_cols=256 Identities=18% Similarity=0.288 Sum_probs=198.7
Q ss_pred CCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEE
Q 003926 478 NFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~ 556 (786)
+|.....||+|+||.||+|+. .+++.||||++........+.+.+|+.++++++||||+++++++.. .+..+
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-------~~~~~ 95 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSE-------NGFIK 95 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEE-------TTEEE
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEe-------CCcEE
Confidence 345566899999999999995 4689999999987655556789999999999999999999999875 45689
Q ss_pred EEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC-CCcccccCCCcccc
Q 003926 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ-NLVAKISSYNLPLL 635 (786)
Q Consensus 557 LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~-~~~~kl~DfGl~~~ 635 (786)
+||||+++|+|.+++........+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.+||+|||++..
T Consensus 96 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~ 172 (295)
T 2clq_A 96 IFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKR 172 (295)
T ss_dssp EEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEE
T ss_pred EEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccc
Confidence 9999999999999998654444678899999999999999999997 9999999999999997 89999999999865
Q ss_pred ccccc-ccccccccccccCccccccC--CCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 636 AENAE-KVGHVIPYSGSIDPTNSARG--KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 636 ~~~~~-~~~~~~~~~~~~aPe~~~~~--~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
..... ......++..|+|||..... .++.++||||||+++|||++|+.||........... ...... .
T Consensus 173 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-~~~~~~--------~ 243 (295)
T 2clq_A 173 LAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMF-KVGMFK--------V 243 (295)
T ss_dssp SCC-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHH-HHHHHC--------C
T ss_pred cCCCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHH-hhcccc--------c
Confidence 43321 12234567789999987654 388999999999999999999999865322211111 110000 1
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
.+.+....+ ..+.+++.+||+.||++|||+.|+++|.|+.
T Consensus 244 ~~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~ 283 (295)
T 2clq_A 244 HPEIPESMS----AEAKAFILKCFEPDPDKRACANDLLVDEFLK 283 (295)
T ss_dssp CCCCCTTSC----HHHHHHHHHTTCSSTTTSCCHHHHHTSGGGC
T ss_pred cccccccCC----HHHHHHHHHHccCChhhCCCHHHHhcChhhh
Confidence 111222222 3566788899999999999999999888764
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-40 Score=351.64 Aligned_cols=264 Identities=16% Similarity=0.221 Sum_probs=204.9
Q ss_pred HHHHHhcCCCcc-CccCCCCCceeEEEEec-CCcEEEEEEecccCC--CChHHHHHHHHHHhcCC-CCCcceeeeeeeec
Q 003926 471 ELEEATNNFDTS-AFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC--HSTRNFMHHIELISKLR-HRHLVSALGHCFEC 545 (786)
Q Consensus 471 ~l~~~~~~f~~~-~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~-H~NIv~l~g~~~~~ 545 (786)
..+...+.|... +.||+|+||.||+|+.. +|+.||||+++.... ....++.+|+.++++++ ||||+++++++..
T Consensus 22 ~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~- 100 (327)
T 3lm5_A 22 SMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYEN- 100 (327)
T ss_dssp CHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-
T ss_pred HHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEe-
Confidence 334445556665 88999999999999965 699999999976543 23578999999999994 6999999999864
Q ss_pred cccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC---C
Q 003926 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ---N 622 (786)
Q Consensus 546 ~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~---~ 622 (786)
.+..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++. +
T Consensus 101 ------~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~ 170 (327)
T 3lm5_A 101 ------TSEIILILEYAAGGEIFSLCLPEL-AEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPL 170 (327)
T ss_dssp ------SSEEEEEEECCTTEEGGGGGSSCC--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTB
T ss_pred ------CCeEEEEEEecCCCcHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCC
Confidence 456899999999999999986532 34689999999999999999999997 9999999999999998 7
Q ss_pred CcccccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHH
Q 003926 623 LVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVT 702 (786)
Q Consensus 623 ~~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~ 702 (786)
+.+||+|||+++............++..|+|||.+....++.++|||||||++|||++|+.||...........+..
T Consensus 171 ~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~--- 247 (327)
T 3lm5_A 171 GDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQ--- 247 (327)
T ss_dssp CCEEECCGGGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---
T ss_pred CcEEEeeCccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHh---
Confidence 89999999999766544444445678899999999888999999999999999999999999976554333222111
Q ss_pred hccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 703 ADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 703 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
... . ..+.. .......+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 248 ~~~----~-~~~~~----~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~ 293 (327)
T 3lm5_A 248 VNV----D-YSEET----FSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQ 293 (327)
T ss_dssp TCC----C-CCTTT----TTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCC
T ss_pred ccc----c-cCchh----hcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhcc
Confidence 100 0 00111 1112235668888999999999999999999999754
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-39 Score=366.61 Aligned_cols=257 Identities=18% Similarity=0.226 Sum_probs=205.7
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC-------------CChHHHHHHHHHHhcCCCCCcceeeee
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-------------HSTRNFMHHIELISKLRHRHLVSALGH 541 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-------------~~~~~f~~E~~~l~~l~H~NIv~l~g~ 541 (786)
.++|...+.||+|+||+||+|+.+ +++.||||++..... ...+.+.+|++++++++|||||+++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 467888999999999999999965 689999999975432 234679999999999999999999999
Q ss_pred eeeccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC
Q 003926 542 CFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ 621 (786)
Q Consensus 542 ~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~ 621 (786)
+.. ....++|||||++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.
T Consensus 115 ~~~-------~~~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~ 181 (504)
T 3q5i_A 115 FED-------KKYFYLVTEFYEGGELFEQIINR---HKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLEN 181 (504)
T ss_dssp EEC-------SSEEEEEEECCTTCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESS
T ss_pred EEc-------CCEEEEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEec
Confidence 865 45789999999999999998753 3589999999999999999999997 9999999999999997
Q ss_pred CC---cccccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHH
Q 003926 622 NL---VAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQ 698 (786)
Q Consensus 622 ~~---~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~ 698 (786)
++ .+||+|||++.............++..|+|||.+. +.|+.++||||+||++|||++|++||.......+...+.
T Consensus 182 ~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~ 260 (504)
T 3q5i_A 182 KNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVE 260 (504)
T ss_dssp TTCCSSEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred CCCCccEEEEECCCCEEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 75 69999999997665544445567888999999875 579999999999999999999999998765544333222
Q ss_pred HHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 699 AVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 699 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
.. . . ..+..... .....+.+++.+||+.||.+|||+.|+++|+|+.+.
T Consensus 261 ~~---~---~--~~~~~~~~----~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~ 308 (504)
T 3q5i_A 261 KG---K---Y--YFDFNDWK----NISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKY 308 (504)
T ss_dssp HC---C---C--CCCHHHHT----TSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHT
T ss_pred cC---C---C--CCCccccC----CCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhc
Confidence 11 0 0 00100001 112356788889999999999999999999998764
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-39 Score=334.22 Aligned_cols=252 Identities=20% Similarity=0.360 Sum_probs=203.5
Q ss_pred cCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~ 556 (786)
++|+..+.||+|+||.||+|+..++..||||++.... ...+++.+|++++++++||||+++++++.. .+..+
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~~~~ 79 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLE-------QAPIC 79 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT-BCHHHHHHHHHHHHTCCCTTBCCEEEEECS-------SSSCE
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcc-------CCCeE
Confidence 4677789999999999999998888999999997654 345789999999999999999999998864 34689
Q ss_pred EEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccc
Q 003926 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636 (786)
Q Consensus 557 LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~ 636 (786)
+||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++...
T Consensus 80 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~ 154 (267)
T 3t9t_A 80 LVTEFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFV 154 (267)
T ss_dssp EEECCCTTCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGB
T ss_pred EEEeCCCCCcHHHHHhhCc--ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccc
Confidence 9999999999999997642 3589999999999999999999997 9999999999999999999999999998655
Q ss_pred cccc--ccccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccccccccc
Q 003926 637 ENAE--KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMVD 713 (786)
Q Consensus 637 ~~~~--~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 713 (786)
.... ......++..|+|||......++.++||||||+++|||++ |++||...........+. ... . ...
T Consensus 155 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~---~~~----~-~~~ 226 (267)
T 3t9t_A 155 LDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS---TGF----R-LYK 226 (267)
T ss_dssp CCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH---TTC----C-CCC
T ss_pred ccccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHh---cCC----c-CCC
Confidence 3221 1122334567999999988889999999999999999999 899997655433322211 110 0 001
Q ss_pred ccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 714 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
+ ... ...+.+++.+||+.||++|||+.|+++++...
T Consensus 227 ~---~~~----~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l 262 (267)
T 3t9t_A 227 P---RLA----STHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 262 (267)
T ss_dssp C---TTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred C---ccC----cHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 1 111 23566788899999999999999999999744
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-39 Score=348.17 Aligned_cols=257 Identities=22% Similarity=0.360 Sum_probs=203.5
Q ss_pred HhcCCCccCccCCCCCceeEEEEe------cCCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccc
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRL------KNGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYF 547 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~ 547 (786)
..++|...+.||+|+||.||+|+. .++..||||+++.... ...+.+.+|++++++++|||||++++++..
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--- 97 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ--- 97 (314)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS---
T ss_pred chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEec---
Confidence 356788889999999999999985 2458999999975432 234678999999999999999999998864
Q ss_pred cCCCCceEEEEEecCCCCChhHHhhcCCC---------------------CCCCCHHHHHHHHHHHHHHhhhhhcCCCCC
Q 003926 548 DDSSVSRIFLIFEYVPNGTLRSWISEGHA---------------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPG 606 (786)
Q Consensus 548 ~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~---------------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ 606 (786)
.+..++||||+++|+|.+++..... ...+++..++.++.|+++||+|||+. +
T Consensus 98 ----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ 170 (314)
T 2ivs_A 98 ----DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---K 170 (314)
T ss_dssp ----SSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred ----CCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---C
Confidence 3568999999999999999976422 12489999999999999999999997 9
Q ss_pred ccccCCCCCceeecCCCcccccCCCcccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CC
Q 003926 607 VFSNNLKITDILLDQNLVAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GR 682 (786)
Q Consensus 607 ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~ 682 (786)
|+||||||+||+++.++.+||+|||++........ .....++..|+|||......++.++|||||||++|||+| |+
T Consensus 171 ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~ 250 (314)
T 2ivs_A 171 LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGG 250 (314)
T ss_dssp EECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSC
T ss_pred CcccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999865533221 122234567999999888889999999999999999999 99
Q ss_pred CCCCCchhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 683 PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 683 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
.||.......+...+.. .. .+.....+ ...+.+++.+||+.||++||++.||++++...
T Consensus 251 ~p~~~~~~~~~~~~~~~---~~--------~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~ 309 (314)
T 2ivs_A 251 NPYPGIPPERLFNLLKT---GH--------RMERPDNC----SEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309 (314)
T ss_dssp CSSTTCCGGGHHHHHHT---TC--------CCCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHhhc---CC--------cCCCCccC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 99976655443332211 00 01111112 23567888899999999999999999998744
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-39 Score=349.66 Aligned_cols=269 Identities=21% Similarity=0.344 Sum_probs=202.0
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCC--hHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHS--TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~--~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.++|+..+.||+|+||.||+|+.. +|+.||||++....... .+.+.+|++++++++||||+++++++.. .
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------~ 96 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKK-------K 96 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-------T
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeec-------C
Confidence 356788899999999999999965 58999999986554322 3568899999999999999999999875 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..++||||+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 97 ~~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 170 (331)
T 4aaa_A 97 KRWYLVFEFVDHTILDDLELFP---NGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGF 170 (331)
T ss_dssp TEEEEEEECCSEEHHHHHHHST---TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEecCCcchHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCC
Confidence 5689999999999999887643 3589999999999999999999998 999999999999999999999999999
Q ss_pred ccccccc-cccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCchhHH-HHHHHHHHHHh------
Q 003926 633 PLLAENA-EKVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL-LKNQLQAVVTA------ 703 (786)
Q Consensus 633 ~~~~~~~-~~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~-~~~~~~~~~~~------ 703 (786)
+...... .......++..|+|||.+... .++.++|||||||++|||++|++||....... ...........
T Consensus 171 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (331)
T 4aaa_A 171 ARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQE 250 (331)
T ss_dssp C------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHH
T ss_pred ceeecCCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhh
Confidence 8654322 222344577889999988765 68999999999999999999999997654332 22221111000
Q ss_pred ---ccccccccccccccccC-----cHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 704 ---DESARRSMVDPAVNKAC-----LDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 704 ---~~~~~~~~~d~~~~~~~-----~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
..........+...... .......+.+++.+||+.||++|||+.|+++|+||..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~ 312 (331)
T 4aaa_A 251 LFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQM 312 (331)
T ss_dssp HHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHG
T ss_pred HhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhcc
Confidence 00000001111111100 1122346778899999999999999999999999875
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-39 Score=350.63 Aligned_cols=257 Identities=22% Similarity=0.350 Sum_probs=201.0
Q ss_pred HhcCCCccCccCCCCCceeEEEEe------cCCcEEEEEEecccCC-CChHHHHHHHHHHhcC-CCCCcceeeeeeeecc
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRL------KNGTFVAIRCLKMKKC-HSTRNFMHHIELISKL-RHRHLVSALGHCFECY 546 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~ 546 (786)
..++|...+.||+|+||.||+|+. .++..||||++..... ...+.+.+|+++++++ +||||+++++++..
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-- 120 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL-- 120 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECS--
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee--
Confidence 456788899999999999999985 2467899999975432 3457899999999999 89999999998864
Q ss_pred ccCCCCceEEEEEecCCCCChhHHhhcCCCC--------------------CCCCHHHHHHHHHHHHHHhhhhhcCCCCC
Q 003926 547 FDDSSVSRIFLIFEYVPNGTLRSWISEGHAH--------------------QSLTWTQRISAAIGVAKGIQFLHTGIVPG 606 (786)
Q Consensus 547 ~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~--------------------~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ 606 (786)
.+..++||||+++|+|.+++...... ..+++..++.++.|++.||+|||+. +
T Consensus 121 -----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ 192 (344)
T 1rjb_A 121 -----SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---S 192 (344)
T ss_dssp -----SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred -----CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---C
Confidence 35689999999999999999764321 2489999999999999999999997 9
Q ss_pred ccccCCCCCceeecCCCcccccCCCcccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CC
Q 003926 607 VFSNNLKITDILLDQNLVAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GR 682 (786)
Q Consensus 607 ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~ 682 (786)
|+||||||+||+++.++.+||+|||++........ .....++..|+|||.+....++.++|||||||++|||+| |+
T Consensus 193 ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~ 272 (344)
T 1rjb_A 193 CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGV 272 (344)
T ss_dssp EEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSC
T ss_pred cccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999865533221 122344567999999988889999999999999999998 99
Q ss_pred CCCCCchhHH-HHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 683 PLKSRKEVDL-LKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 683 ~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
.||....... ....+. .. ..+.....+ ...+.+++.+||+.||.+|||+.||+++++..
T Consensus 273 ~p~~~~~~~~~~~~~~~----~~-------~~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~ 332 (344)
T 1rjb_A 273 NPYPGIPVDANFYKLIQ----NG-------FKMDQPFYA----TEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQ 332 (344)
T ss_dssp CSSTTCCCSHHHHHHHH----TT-------CCCCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCcccCCcHHHHHHHHh----cC-------CCCCCCCCC----CHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence 9997644322 211111 10 001111112 23567788899999999999999999999744
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-39 Score=351.63 Aligned_cols=268 Identities=16% Similarity=0.285 Sum_probs=206.0
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
++|+..+.||+|+||.||+|+.. +|..||+|++..... ...+.+.+|++++++++||||+++++++.. .+.
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------~~~ 105 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-------DGE 105 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEE-------TTE
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEE-------CCE
Confidence 46788899999999999999965 689999999976532 224679999999999999999999999875 456
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++||||+++|+|.+++... ..+++.....++.+++.||.|||+. .+|+||||||+||+++.++.+||+|||++.
T Consensus 106 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 180 (360)
T 3eqc_A 106 ISICMEHMDGGSLDQVLKKA---GRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSG 180 (360)
T ss_dssp EEEEECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHH--HCCCCSCCSGGGEEECTTCCEEECCCCCCH
T ss_pred EEEEEECCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHh--CCEEcCCccHHHEEECCCCCEEEEECCCCc
Confidence 89999999999999999763 3589999999999999999999973 179999999999999999999999999986
Q ss_pred ccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccc-------
Q 003926 635 LAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESA------- 707 (786)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~------- 707 (786)
..... ......++..|+|||.+....++.++|||||||++|||+||+.||......................
T Consensus 181 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (360)
T 3eqc_A 181 QLIDS-MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRT 259 (360)
T ss_dssp HHHHH-C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC----------------
T ss_pred ccccc-cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCccc
Confidence 44322 1223457788999999988889999999999999999999999997655433322211000000000
Q ss_pred ------------------------ccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 003926 708 ------------------------RRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760 (786)
Q Consensus 708 ------------------------~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~ 760 (786)
......+.... ......+.+++.+||+.||++|||+.|+++|+|+.....
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 333 (360)
T 3eqc_A 260 PGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPS---GVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDA 333 (360)
T ss_dssp --------------CCCHHHHHHHHHHSCCCCCCT---TTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHHHH
T ss_pred CCCcccccccCCCCcccchhhhhHHhccCCCCCCc---ccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcchH
Confidence 00000000000 111235778888999999999999999999999987544
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-39 Score=357.39 Aligned_cols=272 Identities=18% Similarity=0.245 Sum_probs=209.2
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
+.|...+.||+|+||+||+|+.. +|+.||||+++.... ...+.+.+|++++++++|||||++++++... ....
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~-----~~~~ 83 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEET-----TTRH 83 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECT-----TTCC
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccC-----CCCe
Confidence 45778899999999999999965 599999999986543 3467789999999999999999999988642 2346
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceee----cCCCcccccCC
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL----DQNLVAKISSY 630 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILl----d~~~~~kl~Df 630 (786)
.++|||||++|+|.+++........+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+||
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DF 160 (396)
T 4eut_A 84 KVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDF 160 (396)
T ss_dssp EEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCG
T ss_pred eEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecC
Confidence 899999999999999998643334599999999999999999999998 99999999999999 88889999999
Q ss_pred CcccccccccccccccccccccCcccccc--------CCCCcccceeehhHHHHHHHhCCCCCCCchh-HHHHHHHHHHH
Q 003926 631 NLPLLAENAEKVGHVIPYSGSIDPTNSAR--------GKLEEKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVV 701 (786)
Q Consensus 631 Gl~~~~~~~~~~~~~~~~~~~~aPe~~~~--------~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~-~~~~~~~~~~~ 701 (786)
|+++............++..|+|||.+.. ..++.++|||||||++|||+||+.||..... ......+....
T Consensus 161 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~ 240 (396)
T 4eut_A 161 GAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII 240 (396)
T ss_dssp GGCEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHH
T ss_pred CCceEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHh
Confidence 99976655444445567889999998754 4578899999999999999999999853221 11112222222
Q ss_pred Hhccccc----cccc------cccc--cccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 702 TADESAR----RSMV------DPAV--NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 702 ~~~~~~~----~~~~------d~~~--~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
....... .... +... ...........+.+++.+||+.||++||++.|+++++...
T Consensus 241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~i 307 (396)
T 4eut_A 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (396)
T ss_dssp HSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred cCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHH
Confidence 2111000 0000 0011 1123355667788899999999999999999999887643
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-39 Score=338.94 Aligned_cols=254 Identities=18% Similarity=0.318 Sum_probs=192.6
Q ss_pred hcCCCccCccCCCCCceeEEEEec----CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK----NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
.++|+..+.||+|+||.||+|+.. .+..||||+++.... ...+.|.+|+.++++++||||+++++++.+
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------ 87 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE------ 87 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS------
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEcc------
Confidence 456778899999999999999864 256799999875432 224679999999999999999999998742
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
+..++||||+++|+|.+++.... ..+++..++.++.|+++||.|||+. +|+||||||+||+++.++.+||+||
T Consensus 88 --~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Df 160 (281)
T 1mp8_A 88 --NPVWIIMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDF 160 (281)
T ss_dssp --SSCEEEEECCTTEEHHHHHHHTT--TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC-
T ss_pred --CccEEEEecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECcc
Confidence 35799999999999999997542 3689999999999999999999997 9999999999999999999999999
Q ss_pred Cccccccccccc--ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccc
Q 003926 631 NLPLLAENAEKV--GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESA 707 (786)
Q Consensus 631 Gl~~~~~~~~~~--~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (786)
|+++........ ....++..|+|||......++.++||||||+++|||++ |++||...........+. ...
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~---~~~--- 234 (281)
T 1mp8_A 161 GLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE---NGE--- 234 (281)
T ss_dssp ------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH---TTC---
T ss_pred ccccccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHH---cCC---
Confidence 998665432211 22234557999999988889999999999999999997 999997654433322221 100
Q ss_pred ccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 708 RRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 708 ~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
. +.....+ ...+.+++.+||+.||++|||+.|+++++....
T Consensus 235 ~-----~~~~~~~----~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 275 (281)
T 1mp8_A 235 R-----LPMPPNC----PPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 275 (281)
T ss_dssp C-----CCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred C-----CCCCCCC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 0 0111122 235667888999999999999999999997543
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=343.95 Aligned_cols=259 Identities=20% Similarity=0.368 Sum_probs=197.8
Q ss_pred cCCCccCccCCCCCceeEEEEecC-----CcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKN-----GTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~-----g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
++|...+.||+|+||.||+|+... +..||||+++.... .....|.+|++++++++||||+++++++..
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------ 117 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISK------ 117 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS------
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEec------
Confidence 345667899999999999998642 34699999975432 234579999999999999999999998864
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
.+..++||||+++|+|.+++... ...+++..++.++.|+++||.|||+. +|+||||||+||+++.++.+||+||
T Consensus 118 -~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Df 191 (333)
T 1mqb_A 118 -YKPMMIITEYMENGALDKFLREK--DGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDF 191 (333)
T ss_dssp -SSSEEEEEECCTTEEHHHHHHHT--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC
T ss_pred -CCCcEEEEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCC
Confidence 45689999999999999999763 24689999999999999999999997 9999999999999999999999999
Q ss_pred Ccccccccccc----cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcc
Q 003926 631 NLPLLAENAEK----VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADE 705 (786)
Q Consensus 631 Gl~~~~~~~~~----~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 705 (786)
|+++....... .....++..|+|||......++.++|||||||++|||++ |+.||.......+...+. ...
T Consensus 192 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~---~~~- 267 (333)
T 1mqb_A 192 GLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIN---DGF- 267 (333)
T ss_dssp CC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH---TTC-
T ss_pred CcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHH---CCC-
Confidence 99865533211 111223457999999988889999999999999999999 999997654433322211 100
Q ss_pred ccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhhhh
Q 003926 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDA 762 (786)
Q Consensus 706 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~~~ 762 (786)
. +.....++ ..+.+++.+||+.||++||++.||++++.........
T Consensus 268 ---~----~~~~~~~~----~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~ 313 (333)
T 1mqb_A 268 ---R----LPTPMDCP----SAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDS 313 (333)
T ss_dssp ---C----CCCCTTCB----HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGG
T ss_pred ---c----CCCcccCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchh
Confidence 0 00111122 3567888899999999999999999999765543333
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-39 Score=335.67 Aligned_cols=253 Identities=18% Similarity=0.356 Sum_probs=198.3
Q ss_pred cCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
++|+..+.||+|+||.||+|+.+ |+.||||+++..... ..+.|.+|++++++++||||+++++++... ..+.
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 83 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSP-----PAPH 83 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTT-----TSSS
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccC-----CCCC
Confidence 46778899999999999999986 889999999865432 246799999999999999999999988641 2356
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++||||+++|+|.+++.... ...+++..+..++.|+++||+|||+. .++|+||||||+||+++.++.+|++|||++.
T Consensus 84 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~ 161 (271)
T 3kmu_A 84 PTLITHWMPYGSLYNVLHEGT-NFVVDQSQAVKFALDMARGMAFLHTL-EPLIPRHALNSRSVMIDEDMTARISMADVKF 161 (271)
T ss_dssp CEEEEECCTTCBHHHHHHSCS-SCCCCHHHHHHHHHHHHHHHHHHTTS-SSCCTTCCCSGGGEEECTTSCEEEEGGGSCC
T ss_pred eEeeecccCCCcHHHHHhhcc-cCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCccceEEEcCCcceeEEecccee
Confidence 899999999999999998642 23689999999999999999999986 1239999999999999999999999888764
Q ss_pred ccccccccccccccccccCccccccCCCC---cccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 635 LAENAEKVGHVIPYSGSIDPTNSARGKLE---EKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~aPe~~~~~~~t---~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
.... ....++..|+|||.+....++ .++|||||||++|||++|+.||...........+ ....
T Consensus 162 ~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~---~~~~------- 227 (271)
T 3kmu_A 162 SFQS----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKV---ALEG------- 227 (271)
T ss_dssp TTSC----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHH---HHSC-------
T ss_pred eecc----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHH---HhcC-------
Confidence 3322 223457789999998765444 3899999999999999999999765443322111 1111
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
..+.....++ ..+.+++.+||+.||++|||+.|+++.+..
T Consensus 228 ~~~~~~~~~~----~~~~~li~~~l~~~p~~Rps~~~il~~L~~ 267 (271)
T 3kmu_A 228 LRPTIPPGIS----PHVSKLMKICMNEDPAKRPKFDMIVPILEK 267 (271)
T ss_dssp CCCCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCCCCCCCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 1111112222 356788889999999999999999998864
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-39 Score=348.96 Aligned_cols=265 Identities=14% Similarity=0.200 Sum_probs=202.7
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCC-CCCcceeeeeeeeccccCCCCce
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLR-HRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
++|+..+.||+|+||.||+|+. .+++.||||+++.. ..+.+.+|++++++++ ||||+++++++.. .....
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~-----~~~~~ 107 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKD-----PVSRT 107 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEEC-----TTTCC
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeecc-----CCCCc
Confidence 5688899999999999999985 57899999998743 3678999999999997 9999999998864 22456
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC-cccccCCCcc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL-VAKISSYNLP 633 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~-~~kl~DfGl~ 633 (786)
.++||||+++|+|.+++.. +++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||++
T Consensus 108 ~~lv~e~~~~~~l~~~~~~------~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a 178 (330)
T 3nsz_A 108 PALVFEHVNNTDFKQLYQT------LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLA 178 (330)
T ss_dssp EEEEEECCCCCCHHHHGGG------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred eEEEEeccCchhHHHHHHh------CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCc
Confidence 8999999999999999853 78899999999999999999997 999999999999999776 8999999999
Q ss_pred cccccccccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCc--hhHHHHHHHHHHHHhcc----c
Q 003926 634 LLAENAEKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRK--EVDLLKNQLQAVVTADE----S 706 (786)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~--~~~~~~~~~~~~~~~~~----~ 706 (786)
+............++..|+|||.... ..++.++|||||||++|||++|+.||... ..+.+............ .
T Consensus 179 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 258 (330)
T 3nsz_A 179 EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 258 (330)
T ss_dssp EECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHH
T ss_pred eEcCCCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHH
Confidence 76654444445567788999998866 66899999999999999999999998432 22222221111100000 0
Q ss_pred cccccccc----------------cccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 707 ARRSMVDP----------------AVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 707 ~~~~~~d~----------------~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
......++ .............+.+++.+||+.||++|||++|+++|+||...
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~ 326 (330)
T 3nsz_A 259 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 326 (330)
T ss_dssp HTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTC
T ss_pred HhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhh
Confidence 00000000 00000111123467788899999999999999999999998754
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-39 Score=373.31 Aligned_cols=244 Identities=18% Similarity=0.280 Sum_probs=194.7
Q ss_pred ccCCCCCceeEEEEec---CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEEEE
Q 003926 484 FMGEGSQGQMYRGRLK---NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIF 559 (786)
Q Consensus 484 ~iG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV~ 559 (786)
.||+|+||.||+|.++ ++..||||+++.... ...++|.+|+++|++++|||||+++|+|.. +..++||
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~--------~~~~lv~ 414 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA--------EALMLVM 414 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES--------SSEEEEE
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc--------CCeEEEE
Confidence 7999999999999864 467899999986543 346789999999999999999999999853 3489999
Q ss_pred ecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccccc
Q 003926 560 EYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENA 639 (786)
Q Consensus 560 Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~ 639 (786)
|||++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 415 E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~ 489 (613)
T 2ozo_A 415 EMAGGGPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGAD 489 (613)
T ss_dssp ECCTTCBHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--
T ss_pred EeCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCC
Confidence 999999999999753 34699999999999999999999997 9999999999999999999999999999765322
Q ss_pred ccc----ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccccccccccc
Q 003926 640 EKV----GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMVDP 714 (786)
Q Consensus 640 ~~~----~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 714 (786)
... ....++..|+|||.+..+.++.++|||||||++|||+| |+.||.......+...+.. . . + .
T Consensus 490 ~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~----~--~-~----~ 558 (613)
T 2ozo_A 490 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ----G--K-R----M 558 (613)
T ss_dssp ------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHT----T--C-C----C
T ss_pred CceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHc----C--C-C----C
Confidence 211 11223457999999988899999999999999999998 9999976554433322211 0 0 0 1
Q ss_pred cccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 715 AVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 715 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
..+..++ ..+.+++.+||+.||++||++.+|++.|..
T Consensus 559 ~~p~~~~----~~l~~li~~cl~~dP~~RPs~~~l~~~L~~ 595 (613)
T 2ozo_A 559 ECPPECP----PELYALMSDCWIYKWEDRPDFLTVEQRMRA 595 (613)
T ss_dssp CCCTTCC----HHHHHHHHHTTCSSTTTSCCHHHHHHHHHH
T ss_pred CCCCcCC----HHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 1111222 456788899999999999999999988863
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-39 Score=349.80 Aligned_cols=250 Identities=15% Similarity=0.207 Sum_probs=180.1
Q ss_pred cCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCC-CCCcceeeeeeeeccccCCCCceEEEEE
Q 003926 482 SAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLR-HRHLVSALGHCFECYFDDSSVSRIFLIF 559 (786)
Q Consensus 482 ~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~NIv~l~g~~~~~~~~~~~~~~~~LV~ 559 (786)
.+.||+|+||.||+|+.+ +|+.||||++... ....+.+|++++++++ |||||++++++.. ....|+||
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~-------~~~~~lv~ 85 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHD-------QLHTFLVM 85 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-------SSEEEEEE
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEc-------CCEEEEEE
Confidence 478999999999999975 6899999998643 3567889999999997 9999999999865 45689999
Q ss_pred ecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC---cccccCCCccccc
Q 003926 560 EYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL---VAKISSYNLPLLA 636 (786)
Q Consensus 560 Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~---~~kl~DfGl~~~~ 636 (786)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||+++..
T Consensus 86 e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 159 (325)
T 3kn6_A 86 ELLNGGELFERIKKK---KHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLK 159 (325)
T ss_dssp CCCCSCBHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEEC
T ss_pred EccCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceec
Confidence 999999999999863 3689999999999999999999997 999999999999997665 8999999998654
Q ss_pred ccc-cccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhH----HHHHHHHHHHHhcccccccc
Q 003926 637 ENA-EKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVD----LLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 637 ~~~-~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 711 (786)
... .......++..|+|||.+....++.++|||||||++|||++|++||...... .............
T Consensus 160 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~------- 232 (325)
T 3kn6_A 160 PPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGD------- 232 (325)
T ss_dssp CC----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTC-------
T ss_pred CCCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCC-------
Confidence 332 2223445678899999998888999999999999999999999999754321 1111111111100
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
..............+.+++.+||+.||++|||+.|+++|+|+.
T Consensus 233 --~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~ 275 (325)
T 3kn6_A 233 --FSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQ 275 (325)
T ss_dssp --CCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGC
T ss_pred --CCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhc
Confidence 0000011112234577888999999999999999999888764
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-39 Score=374.40 Aligned_cols=252 Identities=24% Similarity=0.409 Sum_probs=203.4
Q ss_pred HhcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
..++|...+.||+|+||.||+|+++++..||||+++... ...++|.+|+++|++++|||||+++++|.+ +.
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~--------~~ 335 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE--------EP 335 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS--------SS
T ss_pred chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee--------cc
Confidence 455677889999999999999999888889999998654 346789999999999999999999998753 34
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++|||||++|+|.+++.... ...+++.+++.++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 336 ~~lv~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~ 411 (535)
T 2h8h_A 336 IYIVTEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLAR 411 (535)
T ss_dssp CEEEECCCTTEEHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTT
T ss_pred ceEeeehhcCCcHHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccce
Confidence 799999999999999997421 23589999999999999999999997 99999999999999999999999999997
Q ss_pred ccccccc--cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 635 LAENAEK--VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 635 ~~~~~~~--~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
....... .....++..|+|||.+..+.++.++|||||||++|||+| |+.||.......+...+.. . .+
T Consensus 412 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~----~---~~-- 482 (535)
T 2h8h_A 412 LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER----G---YR-- 482 (535)
T ss_dssp TCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHT----T---CC--
T ss_pred ecCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc----C---CC--
Confidence 6543211 112234567999999988899999999999999999999 9999976554333322211 0 00
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
......++ ..+.+++.+||+.||++|||+.+|++.|.
T Consensus 483 --~~~~~~~~----~~l~~li~~cl~~dP~~RPt~~~l~~~L~ 519 (535)
T 2h8h_A 483 --MPCPPECP----ESLHDLMCQCWRKEPEERPTFEYLQAFLE 519 (535)
T ss_dssp --CCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --CCCCCCCC----HHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 01111222 35678888999999999999999998885
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-39 Score=352.26 Aligned_cols=266 Identities=10% Similarity=0.085 Sum_probs=199.8
Q ss_pred hcCCCccCccCCCCCceeEEEEecC------CcEEEEEEecccCCC-----------ChHHHHHHHHHHhcCCCCCccee
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLKN------GTFVAIRCLKMKKCH-----------STRNFMHHIELISKLRHRHLVSA 538 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~~------g~~vAvK~l~~~~~~-----------~~~~f~~E~~~l~~l~H~NIv~l 538 (786)
.++|...+.||+|+||.||+|+.+. ++.||||++...... ....+.+|+..++.++|||||++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4578889999999999999998754 478999998654311 11235567778888999999999
Q ss_pred eeeeeeccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCcee
Q 003926 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDIL 618 (786)
Q Consensus 539 ~g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NIL 618 (786)
++++.... ......++||||+ +|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||
T Consensus 114 ~~~~~~~~---~~~~~~~lv~e~~-g~~L~~~~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nil 184 (364)
T 3op5_A 114 WGSGLHDK---NGKSYRFMIMDRF-GSDLQKIYEAN--AKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLL 184 (364)
T ss_dssp EEEEEEEE---TTEEEEEEEEECE-EEEHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred Eeeeeecc---CCcceEEEEEeCC-CCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEE
Confidence 99987521 1235689999999 99999999763 24699999999999999999999998 9999999999999
Q ss_pred ec--CCCcccccCCCccccccccccc--------ccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCc
Q 003926 619 LD--QNLVAKISSYNLPLLAENAEKV--------GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRK 688 (786)
Q Consensus 619 ld--~~~~~kl~DfGl~~~~~~~~~~--------~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~ 688 (786)
++ .++.+||+|||+++........ ....++..|+|||.+....++.++|||||||++|||+||+.||...
T Consensus 185 l~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~ 264 (364)
T 3op5_A 185 LNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDN 264 (364)
T ss_dssp EESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence 99 8899999999999655332211 2234788999999998888999999999999999999999999753
Q ss_pred hh-HHHHHHHHHHHHhcccccccccccccc-ccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 689 EV-DLLKNQLQAVVTADESARRSMVDPAVN-KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 689 ~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.. ............. ....+.++.+. ..+ +..+.+++..||+.||++||++.+|++.+....
T Consensus 265 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~----~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~ 328 (364)
T 3op5_A 265 LKDPKYVRDSKIRYRE---NIASLMDKCFPAANA----PGEIAKYMETVKLLDYTEKPLYENLRDILLQGL 328 (364)
T ss_dssp TTCHHHHHHHHHHHHH---CHHHHHHHHSCTTCC----CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHhhh---hHHHHHHHhcccccC----HHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Confidence 22 1111111111111 11122222211 112 235667888999999999999999999886443
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-39 Score=350.61 Aligned_cols=272 Identities=16% Similarity=0.183 Sum_probs=197.2
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.++|+..+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|++++++++|||||++++++..... ....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~-~~~~ 102 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKS-LEEF 102 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCS-TTTC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccc-cccc
Confidence 356888999999999999999854 6899999999754322 24578999999999999999999998864211 0112
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
...++||||++ |+|.+++.. .+++.....++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 103 ~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 173 (371)
T 2xrw_A 103 QDVYIVMELMD-ANLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 173 (371)
T ss_dssp CEEEEEEECCS-EEHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred cceEEEEEcCC-CCHHHHHhh-----ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeec
Confidence 46899999998 478888863 488999999999999999999997 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhc-ccc----
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD-ESA---- 707 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~-~~~---- 707 (786)
++............++..|+|||.+....++.++|||||||++|||++|+.||...+.......+....... ...
T Consensus 174 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 253 (371)
T 2xrw_A 174 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL 253 (371)
T ss_dssp ----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTS
T ss_pred ccccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHh
Confidence 976544333344567788999999988889999999999999999999999997654322211111000000 000
Q ss_pred ----------ccc--------cccccc-c--ccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 708 ----------RRS--------MVDPAV-N--KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 708 ----------~~~--------~~d~~~-~--~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
... ...... + ..........+.+++.+||+.||++|||++|+++|+|+..
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 324 (371)
T 2xrw_A 254 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV 324 (371)
T ss_dssp CHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHT
T ss_pred hhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhh
Confidence 000 000000 0 0011223457889999999999999999999999999874
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-39 Score=360.24 Aligned_cols=272 Identities=19% Similarity=0.261 Sum_probs=200.9
Q ss_pred CCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEE
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~ 556 (786)
.|+..+.||+|+||+||+|+.. +|+.||||++..... .+.+|+++|++++|||||++++++..... .......+
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~-~~~~~~~~ 129 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGE-KKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEET-TTTEEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCC-CCcceeEE
Confidence 5777899999999999999975 699999999865432 23479999999999999999999865321 11233467
Q ss_pred EEEecCCCCChhHHhhcC-CCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCC-CcccccCCCccc
Q 003926 557 LIFEYVPNGTLRSWISEG-HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN-LVAKISSYNLPL 634 (786)
Q Consensus 557 LV~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~-~~~kl~DfGl~~ 634 (786)
+||||+++ +|.+.+... .....+++.....++.|+++||+|||+. +|+||||||+|||++.+ +.+||+|||+++
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 99999986 666655421 1234689999999999999999999997 99999999999999965 678999999997
Q ss_pred ccccccccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCchh-HHHHHHHHHHHHhccc------
Q 003926 635 LAENAEKVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVVTADES------ 706 (786)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~~~-~~~~~~~~~~~~~~~~------ 706 (786)
............++..|+|||.+... .|+.++|||||||++|||++|++||..... +.+...+.........
T Consensus 206 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~ 285 (420)
T 1j1b_A 206 QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 285 (420)
T ss_dssp ECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHC
T ss_pred hcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhC
Confidence 65444333445678889999988654 699999999999999999999999976543 3333333221111000
Q ss_pred -cccccccccccccC-----cHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 707 -ARRSMVDPAVNKAC-----LDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 707 -~~~~~~d~~~~~~~-----~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
...+..-+.+.... .......+.+++.+||+.||++|||+.|+++|+||...
T Consensus 286 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~ 343 (420)
T 1j1b_A 286 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 343 (420)
T ss_dssp SCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred hhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhccc
Confidence 00111111111110 11123467789999999999999999999999998653
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-39 Score=337.70 Aligned_cols=252 Identities=19% Similarity=0.287 Sum_probs=205.5
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|+..+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.. .
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~ 86 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHD-------R 86 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-------S
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEc-------C
Confidence 56888899999999999999965 68899999986532 2345779999999999999999999999865 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..++||||+++|+|.+++... ..+++.....++.|+++||.|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 87 ~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~ 160 (284)
T 2vgo_A 87 KRIYLMLEFAPRGELYKELQKH---GRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGW 160 (284)
T ss_dssp SEEEEEECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTT
T ss_pred CEEEEEEEeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccc
Confidence 5689999999999999999753 3589999999999999999999997 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
+....... .....++..|+|||......++.++||||||+++|||++|+.||...........+. ..
T Consensus 161 ~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~---~~--------- 227 (284)
T 2vgo_A 161 SVHAPSLR-RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV---NV--------- 227 (284)
T ss_dssp CEECSSSC-BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH---TT---------
T ss_pred cccCcccc-cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHh---cc---------
Confidence 86543322 233456788999999988889999999999999999999999997654433221111 10
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
+...+... ...+.+++.+||+.||.+|||+.|+++|+|+...
T Consensus 228 ~~~~~~~~----~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~ 269 (284)
T 2vgo_A 228 DLKFPPFL----SDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKAN 269 (284)
T ss_dssp CCCCCTTS----CHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHH
T ss_pred ccCCCCcC----CHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhh
Confidence 01111111 2346678889999999999999999999998764
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-39 Score=351.55 Aligned_cols=257 Identities=17% Similarity=0.295 Sum_probs=201.4
Q ss_pred hcCCCccCccCCCCCceeEEEEe----cCCcEEEEEEecccC----CCChHHHHHHHHHHhcC-CCCCcceeeeeeeecc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL----KNGTFVAIRCLKMKK----CHSTRNFMHHIELISKL-RHRHLVSALGHCFECY 546 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~----~~g~~vAvK~l~~~~----~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~ 546 (786)
.++|+..+.||+|+||.||+|+. .+|+.||||+++... ....+.+.+|+++++++ +||||+++++++..
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-- 130 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT-- 130 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE--
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEee--
Confidence 35788899999999999999986 368999999997542 23356688899999999 69999999998865
Q ss_pred ccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCccc
Q 003926 547 FDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAK 626 (786)
Q Consensus 547 ~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~k 626 (786)
.+..++||||+++|+|.+++... ..+++.....++.|+++||.|||+. +|+||||||+|||++.++.+|
T Consensus 131 -----~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~k 199 (355)
T 1vzo_A 131 -----ETKLHLILDYINGGELFTHLSQR---ERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVV 199 (355)
T ss_dssp -----TTEEEEEECCCCSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEE
T ss_pred -----CceEEEEeecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEE
Confidence 45689999999999999999753 3589999999999999999999997 999999999999999999999
Q ss_pred ccCCCcccccccc--cccccccccccccCcccccc--CCCCcccceeehhHHHHHHHhCCCCCCCchh-HHHHHHHHHHH
Q 003926 627 ISSYNLPLLAENA--EKVGHVIPYSGSIDPTNSAR--GKLEEKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVV 701 (786)
Q Consensus 627 l~DfGl~~~~~~~--~~~~~~~~~~~~~aPe~~~~--~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~-~~~~~~~~~~~ 701 (786)
|+|||+++..... .......++..|+|||.+.. ..++.++|||||||++|||+||+.||..... ...........
T Consensus 200 l~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~ 279 (355)
T 1vzo_A 200 LTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRIL 279 (355)
T ss_dssp ESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHH
T ss_pred EeeCCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHh
Confidence 9999998654322 12233467889999999875 3478999999999999999999999864321 11111221111
Q ss_pred HhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHHHHHHHH
Q 003926 702 TADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERP-----SVEDVLWNLQFAAQ 758 (786)
Q Consensus 702 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~~l~~~~~ 758 (786)
... +..... ....+.+++.+||+.||++|| ++.|+++|+||...
T Consensus 280 ~~~---------~~~~~~----~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~ 328 (355)
T 1vzo_A 280 KSE---------PPYPQE----MSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI 328 (355)
T ss_dssp HCC---------CCCCTT----SCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred ccC---------CCCCcc----cCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcC
Confidence 111 111111 123466788899999999999 99999999998753
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-39 Score=358.48 Aligned_cols=274 Identities=17% Similarity=0.220 Sum_probs=200.8
Q ss_pred cCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~ 556 (786)
.+|...+.||+|+||+||+|+...+..||||++...... ..+|++++++++|||||++++++..... .......+
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~-~~~~~~~~ 114 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGD-KKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESS-SSSCEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCC-CCCceEEE
Confidence 357788999999999999999877677999988644321 2379999999999999999999875321 12234578
Q ss_pred EEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeec-CCCcccccCCCcccc
Q 003926 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD-QNLVAKISSYNLPLL 635 (786)
Q Consensus 557 LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld-~~~~~kl~DfGl~~~ 635 (786)
+||||++++.+............+++.....++.|+++||+|||+. +|+||||||+|||++ .++.+||+|||+++.
T Consensus 115 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~ 191 (394)
T 4e7w_A 115 LVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKI 191 (394)
T ss_dssp EEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence 9999999754444332211234689999999999999999999997 999999999999999 799999999999976
Q ss_pred cccccccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCchhH-HHHHHHHHHHHhcccc------
Q 003926 636 AENAEKVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRKEVD-LLKNQLQAVVTADESA------ 707 (786)
Q Consensus 636 ~~~~~~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~-~~~~~~~~~~~~~~~~------ 707 (786)
...........++..|+|||.+.+. .|+.++|||||||++|||++|++||...... .+...+..........
T Consensus 192 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~ 271 (394)
T 4e7w_A 192 LIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNP 271 (394)
T ss_dssp CCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCG
T ss_pred ccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhCh
Confidence 6444444445677889999987654 5899999999999999999999999875433 3333322211110000
Q ss_pred -ccccccccccc-----cCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 708 -RRSMVDPAVNK-----ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 708 -~~~~~d~~~~~-----~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
.....-+.... .........+.+++.+||+.||++|||+.|+++|+||...
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~ 328 (394)
T 4e7w_A 272 NYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDEL 328 (394)
T ss_dssp GGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTT
T ss_pred hhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhh
Confidence 00000000000 0111123467789999999999999999999999998653
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-39 Score=348.81 Aligned_cols=254 Identities=17% Similarity=0.283 Sum_probs=206.0
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC---ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH---STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~---~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
.++|...+.||+|+||.||+|+.. +++.||+|++...... ..+.+.+|++++++++||||+++++++.+
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------- 112 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED------- 112 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC-------
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-------
Confidence 356778899999999999999965 5889999998765322 34678999999999999999999999875
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
.+..++||||+++|+|.+++... ..+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||
T Consensus 113 ~~~~~lv~e~~~~~~L~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg 186 (335)
T 2owb_A 113 NDFVFVVLELCRRRSLLELHKRR---KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFG 186 (335)
T ss_dssp SSEEEEEECCCTTCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCT
T ss_pred CCeEEEEEecCCCCCHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeecc
Confidence 45689999999999999998753 3589999999999999999999997 99999999999999999999999999
Q ss_pred ccccccc-ccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 632 LPLLAEN-AEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 632 l~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
++..... ........++..|+|||.+....++.++|||||||++|||++|+.||...........+. ...
T Consensus 187 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~---~~~------ 257 (335)
T 2owb_A 187 LATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK---KNE------ 257 (335)
T ss_dssp TCEECCSTTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH---HTC------
T ss_pred CceecccCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHh---cCC------
Confidence 9865532 222334457788999999988889999999999999999999999997654433221111 110
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
........ ..+.+++.+||+.||++|||+.|+++|.|+...
T Consensus 258 ---~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~ 298 (335)
T 2owb_A 258 ---YSIPKHIN----PVAASLIQKMLQTDPTARPTINELLNDEFFTSG 298 (335)
T ss_dssp ---CCCCTTSC----HHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTS
T ss_pred ---CCCCccCC----HHHHHHHHHHccCChhHCcCHHHHhcCccccCC
Confidence 01111111 245678889999999999999999999998753
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-39 Score=352.78 Aligned_cols=253 Identities=21% Similarity=0.370 Sum_probs=190.5
Q ss_pred CCCccCccCCCCCceeEEEEec--C--CcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK--N--GTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~--~--g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.|...+.||+|+||+||+|+.. + +..||||.++.... ...++|.+|+.++++++|||||+++++|.+. .
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~------~ 163 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS------E 163 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCC------S
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcC------C
Confidence 3556789999999999999863 2 24689999875432 2356799999999999999999999987641 3
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..++||||+++|+|.+++... ...+++..++.++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 164 ~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~ 238 (373)
T 3c1x_A 164 GSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGL 238 (373)
T ss_dssp SCCEEEEECCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC--
T ss_pred CCeEEEEECCCCCCHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeeccc
Confidence 4579999999999999999753 23588999999999999999999997 999999999999999999999999999
Q ss_pred ccccccccc-----cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccc
Q 003926 633 PLLAENAEK-----VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADES 706 (786)
Q Consensus 633 ~~~~~~~~~-----~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (786)
++....... .....++..|+|||......++.++|||||||++|||+| |.+||...........+. ..
T Consensus 239 a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~----~~-- 312 (373)
T 3c1x_A 239 ARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL----QG-- 312 (373)
T ss_dssp -------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHH----TT--
T ss_pred cccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHH----cC--
Confidence 865432211 122334567999999988899999999999999999999 678876544333222111 11
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
.....| ..++ ..+.+++.+||+.||++|||+.|+++++...
T Consensus 313 --~~~~~p---~~~~----~~l~~li~~cl~~dp~~RPs~~ell~~L~~i 353 (373)
T 3c1x_A 313 --RRLLQP---EYCP----DPLYEVMLKCWHPKAEMRPSFSELVSRISAI 353 (373)
T ss_dssp --CCCCCC---TTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --CCCCCC---CCCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 011111 1222 3567888899999999999999999999744
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-39 Score=339.85 Aligned_cols=253 Identities=19% Similarity=0.345 Sum_probs=206.7
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
+.|+..+.||+|+||.||+|+. .+++.||||++..... ...+.+.+|+.++++++||||+++++++.. ...
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~~ 94 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK-------DTK 94 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEE-------TTE
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec-------CCe
Confidence 4578889999999999999985 4689999999976543 345789999999999999999999999875 356
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++||||+++|+|.+++.. ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 95 ~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~ 167 (303)
T 3a7i_A 95 LWIIMEYLGGGSALDLLEP----GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAG 167 (303)
T ss_dssp EEEEEECCTTEEHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEEEeCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccce
Confidence 8999999999999999964 3589999999999999999999997 99999999999999999999999999986
Q ss_pred cccccc-ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccccc
Q 003926 635 LAENAE-KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVD 713 (786)
Q Consensus 635 ~~~~~~-~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 713 (786)
...... ......++..|+|||......++.++||||||+++|||++|++|+...........+. ... .
T Consensus 168 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~---~~~--------~ 236 (303)
T 3a7i_A 168 QLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIP---KNN--------P 236 (303)
T ss_dssp ECBTTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH---HSC--------C
T ss_pred ecCccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhh---cCC--------C
Confidence 543322 2233456778999999988889999999999999999999999997654433222111 110 0
Q ss_pred ccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 714 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
+.....++ ..+.+++.+||+.||++|||+.|+++|+|+...
T Consensus 237 ~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~ 277 (303)
T 3a7i_A 237 PTLEGNYS----KPLKEFVEACLNKEPSFRPTAKELLKHKFILRN 277 (303)
T ss_dssp CCCCSSCC----HHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHHH
T ss_pred CCCccccC----HHHHHHHHHHcCCChhhCcCHHHHhhChhhhcC
Confidence 11111222 346678889999999999999999999998764
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-39 Score=344.01 Aligned_cols=256 Identities=20% Similarity=0.336 Sum_probs=202.2
Q ss_pred hcCCCccCccCCCCCceeEEEEe------cCCcEEEEEEecccCC-CChHHHHHHHHHHhcC-CCCCcceeeeeeeeccc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL------KNGTFVAIRCLKMKKC-HSTRNFMHHIELISKL-RHRHLVSALGHCFECYF 547 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~ 547 (786)
.++|...+.||+|+||.||+|+. .+++.||||+++.... ...+.|.+|+++++++ +||||+++++++..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~--- 98 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI--- 98 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS---
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEec---
Confidence 45678889999999999999985 2478999999975543 2346799999999999 99999999999864
Q ss_pred cCCCCceEEEEEecCCCCChhHHhhcCCC---------------CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCC
Q 003926 548 DDSSVSRIFLIFEYVPNGTLRSWISEGHA---------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNL 612 (786)
Q Consensus 548 ~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~---------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdl 612 (786)
.+..++||||+++|+|.+++..... ...+++..++.++.|+++||+|||+. +|+||||
T Consensus 99 ----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl 171 (313)
T 1t46_A 99 ----GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDL 171 (313)
T ss_dssp ----SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred ----CCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCC
Confidence 3567999999999999999976432 12489999999999999999999997 9999999
Q ss_pred CCCceeecCCCcccccCCCcccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCc
Q 003926 613 KITDILLDQNLVAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRK 688 (786)
Q Consensus 613 k~~NILld~~~~~kl~DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~ 688 (786)
||+||+++.++.+||+|||++........ .....++..|+|||......++.++||||||+++|||+| |+.||...
T Consensus 172 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 251 (313)
T 1t46_A 172 AARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM 251 (313)
T ss_dssp SGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred ccceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcc
Confidence 99999999999999999999865543322 122334567999999888899999999999999999999 99998764
Q ss_pred hhHH-HHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 689 EVDL-LKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 689 ~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
.... ....+.. . .... ..... ...+.+++.+||+.||.+|||+.|+++++...
T Consensus 252 ~~~~~~~~~~~~----~---~~~~----~~~~~----~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 305 (313)
T 1t46_A 252 PVDSKFYKMIKE----G---FRML----SPEHA----PAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ 305 (313)
T ss_dssp CSSHHHHHHHHH----T---CCCC----CCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cchhHHHHHhcc----C---CCCC----CcccC----CHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence 4322 2111111 1 0110 11111 23567888899999999999999999998743
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=337.37 Aligned_cols=257 Identities=10% Similarity=0.081 Sum_probs=200.4
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCCCCce
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
++|+..+.||+|+||.||+|+. .+|+.||||++.... ..+.+.+|+++++++ +|+|++++++++.. ...
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~-------~~~ 80 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQE-------GLH 80 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEE-------TTE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCC-------Cce
Confidence 4688889999999999999995 579999999986443 345688999999999 89999999998765 456
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCc-----ccccC
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV-----AKISS 629 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~-----~kl~D 629 (786)
.++||||+ +|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|
T Consensus 81 ~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~D 154 (298)
T 1csn_A 81 NVLVIDLL-GPSLEDLLDLCG--RKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVD 154 (298)
T ss_dssp EEEEEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECC
T ss_pred eEEEEEec-CCCHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEE
Confidence 89999999 999999998642 3589999999999999999999997 9999999999999988776 99999
Q ss_pred CCcccccccccc--------cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHH
Q 003926 630 YNLPLLAENAEK--------VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVV 701 (786)
Q Consensus 630 fGl~~~~~~~~~--------~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~ 701 (786)
||++........ .....++..|+|||......++.++|||||||++|||++|+.||................
T Consensus 155 fg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 234 (298)
T 1csn_A 155 FGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIG 234 (298)
T ss_dssp CTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHH
T ss_pred CccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHH
Confidence 999865543221 233457788999999988889999999999999999999999997632211111111111
Q ss_pred HhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 702 TADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 702 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
..... ...+.....+ ...+.+++.+||+.||++||++++|++.+...
T Consensus 235 ~~~~~----~~~~~~~~~~----~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~ 281 (298)
T 1csn_A 235 EKKQS----TPLRELCAGF----PEEFYKYMHYARNLAFDATPDYDYLQGLFSKV 281 (298)
T ss_dssp HHHHH----SCHHHHTTTS----CHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred hhccC----ccHHHHHhhC----cHHHHHHHHHHhcCCcccCCCHHHHHHHHHHH
Confidence 10000 0001111112 23567888899999999999999999998744
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-39 Score=348.71 Aligned_cols=270 Identities=21% Similarity=0.306 Sum_probs=199.6
Q ss_pred HhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC-----ChHHHHHHHHHHhcCCCCCcceeeeeeeecccc
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH-----STRNFMHHIELISKLRHRHLVSALGHCFECYFD 548 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-----~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~ 548 (786)
..++|...+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|++++++++|||||++++++..
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---- 83 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGH---- 83 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECC----
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEee----
Confidence 3567889999999999999999965 6899999999754321 13578899999999999999999998864
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCccccc
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKIS 628 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~ 628 (786)
.+..++||||+++ +|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+
T Consensus 84 ---~~~~~lv~e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~ 154 (346)
T 1ua2_A 84 ---KSNISLVFDFMET-DLEVIIKDN--SLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLA 154 (346)
T ss_dssp ---TTCCEEEEECCSE-EHHHHHTTC--CSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred ---CCceEEEEEcCCC-CHHHHHHhc--CcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEE
Confidence 3568999999986 899988753 24588889999999999999999998 99999999999999999999999
Q ss_pred CCCcccccccc-cccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCchhHH-HHHHHHHHHHhcc
Q 003926 629 SYNLPLLAENA-EKVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL-LKNQLQAVVTADE 705 (786)
Q Consensus 629 DfGl~~~~~~~-~~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~-~~~~~~~~~~~~~ 705 (786)
|||+++..... .......++..|+|||.+... .++.++|||||||++|||++|++||....... +............
T Consensus 155 Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~ 234 (346)
T 1ua2_A 155 DFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTE 234 (346)
T ss_dssp CCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCT
T ss_pred ecccceeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCCh
Confidence 99998755322 223345677889999988654 58999999999999999999999987654433 2222222111111
Q ss_pred cccccc---ccc----cccc----cCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 706 SARRSM---VDP----AVNK----ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 706 ~~~~~~---~d~----~~~~----~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
..+... .+. .... .........+.+++.+||+.||++|||+.|+++|+||..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~ 297 (346)
T 1ua2_A 235 EQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSN 297 (346)
T ss_dssp TTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTS
T ss_pred hhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhc
Confidence 111111 000 0000 000112346778899999999999999999999999764
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-38 Score=337.82 Aligned_cols=257 Identities=18% Similarity=0.266 Sum_probs=201.3
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC----CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK----CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~----~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
.++|...+.||+|+||.||+|... +++.||||+++... ....+.|.+|++++++++||||+++++++.. .
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~ 78 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYN-----E 78 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEC-----C
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEc-----C
Confidence 467899999999999999999964 68999999997543 2335679999999999999999999998753 1
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
.....++||||+++| |.+++.... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+||
T Consensus 79 ~~~~~~lv~e~~~~~-l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~df 153 (305)
T 2wtk_C 79 EKQKMYMVMEYCVCG-MQEMLDSVP-EKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISAL 153 (305)
T ss_dssp ---CEEEEEECCSEE-HHHHHHHST-TCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCC
T ss_pred CCCeEEEEehhccCC-HHHHHHhCc-ccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecc
Confidence 235689999999986 777776532 34689999999999999999999997 9999999999999999999999999
Q ss_pred Ccccccccc---cccccccccccccCccccccCC--CCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcc
Q 003926 631 NLPLLAENA---EKVGHVIPYSGSIDPTNSARGK--LEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADE 705 (786)
Q Consensus 631 Gl~~~~~~~---~~~~~~~~~~~~~aPe~~~~~~--~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 705 (786)
|++...... .......++..|+|||...... ++.++||||||+++|||++|+.||...........+.. ..
T Consensus 154 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~---~~- 229 (305)
T 2wtk_C 154 GVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGK---GS- 229 (305)
T ss_dssp TTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH---CC-
T ss_pred ccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhc---CC-
Confidence 998654321 1222345678899999876543 47899999999999999999999987554333222211 10
Q ss_pred ccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 706 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
......++ ..+.+++.+||+.||++|||+.|+++|+|+.+.
T Consensus 230 --------~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~ 270 (305)
T 2wtk_C 230 --------YAIPGDCG----PPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKK 270 (305)
T ss_dssp --------CCCCSSSC----HHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSC
T ss_pred --------CCCCCccC----HHHHHHHHHHccCChhhCCCHHHHhcCcccccC
Confidence 01111222 346678889999999999999999999998753
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=347.04 Aligned_cols=275 Identities=16% Similarity=0.264 Sum_probs=205.1
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccc-cCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYF-DDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~-~~~~~ 552 (786)
++|+..+.||+|+||.||+|+. .+|+.||||++..... .....+.+|++++++++||||+++++++..... .....
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 5688899999999999999996 5799999999875543 234678999999999999999999999875221 01113
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..++||||+++ +|.+.+.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 170 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNVL--VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGL 170 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred ceEEEEEeccCC-CHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchh
Confidence 568999999985 8888876532 3589999999999999999999998 999999999999999999999999999
Q ss_pred ccccccc-----cccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccc
Q 003926 633 PLLAENA-----EKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADES 706 (786)
Q Consensus 633 ~~~~~~~-----~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (786)
++..... .......++..|+|||.+.. ..++.++|||||||++|||+||++||...........+.........
T Consensus 171 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~ 250 (351)
T 3mi9_A 171 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITP 250 (351)
T ss_dssp CEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred cccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCh
Confidence 8654321 12233456788999998765 45899999999999999999999999876554433333322221111
Q ss_pred c-ccccccccc---------cccCcHHH------HHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 707 A-RRSMVDPAV---------NKACLDES------LKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 707 ~-~~~~~d~~~---------~~~~~~~~------~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
. .....+... ......+. ...+.+++.+||+.||++|||+.|+++|+||..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~ 317 (351)
T 3mi9_A 251 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS 317 (351)
T ss_dssp TTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGS
T ss_pred hhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCC
Confidence 1 111000000 00001111 234778999999999999999999999998753
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-39 Score=339.95 Aligned_cols=253 Identities=23% Similarity=0.380 Sum_probs=202.6
Q ss_pred HhcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
..++|+..+.||+|+||.||+|+.+++..||||+++... ...+.|.+|++++++++||||+++++++.. +.
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--------~~ 81 (279)
T 1qpc_A 11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ--------EP 81 (279)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS--------SS
T ss_pred CHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC--------CC
Confidence 345678889999999999999998888899999997543 346789999999999999999999998753 34
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+||++++++.+||+|||++.
T Consensus 82 ~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 157 (279)
T 1qpc_A 82 IYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLAR 157 (279)
T ss_dssp CEEEEECCTTCBHHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred cEEEEecCCCCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccc
Confidence 799999999999999997421 12589999999999999999999997 99999999999999999999999999986
Q ss_pred cccccccc--ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 635 LAENAEKV--GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 635 ~~~~~~~~--~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
........ ....++..|+|||....+.++.++||||||+++|||++ |+.||...........+. .. ..
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~---~~----~~-- 228 (279)
T 1qpc_A 158 LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE---RG----YR-- 228 (279)
T ss_dssp ECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH---TT----CC--
T ss_pred cccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHh---cc----cC--
Confidence 55432211 22234567999999988889999999999999999999 899987654433322211 10 00
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
+.....+ ...+.+++.+||+.||++|||+.|+++.+..
T Consensus 229 --~~~~~~~----~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~ 266 (279)
T 1qpc_A 229 --MVRPDNC----PEELYQLMRLCWKERPEDRPTFDYLRSVLED 266 (279)
T ss_dssp --CCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred --CCCcccc----cHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence 1111112 2356788889999999999999999998863
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-39 Score=347.03 Aligned_cols=255 Identities=20% Similarity=0.332 Sum_probs=198.7
Q ss_pred CCccCccCCCCCceeEEEEec-----CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 479 FDTSAFMGEGSQGQMYRGRLK-----NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~-----~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
|+..+.||+|+||+||+|.++ +|+.||||+++.... ...+.|.+|++++++++||||+++++++... ..
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~ 107 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDA-----GA 107 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET-----TT
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecC-----CC
Confidence 467899999999999998753 688999999986532 2246799999999999999999999998752 23
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
...++||||+++|+|.+++... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 108 ~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~ 180 (318)
T 3lxp_A 108 ASLQLVMEYVPLGSLRDYLPRH----SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGL 180 (318)
T ss_dssp TEEEEEECCCTTCBHHHHGGGS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGG
T ss_pred ceEEEEEecccCCcHHHHHhhC----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccc
Confidence 5689999999999999999753 489999999999999999999998 999999999999999999999999999
Q ss_pred ccccccccc----cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHH-----------HH
Q 003926 633 PLLAENAEK----VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKN-----------QL 697 (786)
Q Consensus 633 ~~~~~~~~~----~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~-----------~~ 697 (786)
+........ .....++..|+|||.+....++.++||||||+++|||+||+.|+.......... .+
T Consensus 181 a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 260 (318)
T 3lxp_A 181 AKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRL 260 (318)
T ss_dssp CEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHH
T ss_pred cccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHH
Confidence 876543221 122345566999999988889999999999999999999999986533211100 00
Q ss_pred HHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 698 QAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 698 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
...... ....... ......+.+++.+||+.||++|||+.|+++.+...
T Consensus 261 ~~~~~~-------~~~~~~~----~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l 308 (318)
T 3lxp_A 261 TELLER-------GERLPRP----DKCPAEVYHLMKNCWETEASFRPTFENLIPILKTV 308 (318)
T ss_dssp HHHHHT-------TCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHhc-------ccCCCCC----ccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 000000 0011111 12224577888899999999999999999988744
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-39 Score=346.66 Aligned_cols=258 Identities=19% Similarity=0.384 Sum_probs=203.3
Q ss_pred hcCCCccCccCCCCCceeEEEEec--------CCcEEEEEEecccCC-CChHHHHHHHHHHhcC-CCCCcceeeeeeeec
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK--------NGTFVAIRCLKMKKC-HSTRNFMHHIELISKL-RHRHLVSALGHCFEC 545 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~ 545 (786)
.++|...+.||+|+||.||+|+.. ++..||||+++.... ...+.+.+|+++++++ +||||++++++|..
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~- 112 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ- 112 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc-
Confidence 467888899999999999999863 477899999975532 2346789999999999 89999999998864
Q ss_pred cccCCCCceEEEEEecCCCCChhHHhhcCCC-------------CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCC
Q 003926 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGHA-------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNL 612 (786)
Q Consensus 546 ~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdl 612 (786)
.+..++||||+++|+|.+++..... ...+++..++.++.|+++||.|||+. +|+||||
T Consensus 113 ------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dl 183 (334)
T 2pvf_A 113 ------DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDL 183 (334)
T ss_dssp ------SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred ------CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCC
Confidence 3568999999999999999986431 13489999999999999999999997 9999999
Q ss_pred CCCceeecCCCcccccCCCcccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCc
Q 003926 613 KITDILLDQNLVAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRK 688 (786)
Q Consensus 613 k~~NILld~~~~~kl~DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~ 688 (786)
||+||+++.++.+||+|||++........ .....++..|+|||......++.++|||||||++|||+| |+.||...
T Consensus 184 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 263 (334)
T 2pvf_A 184 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 263 (334)
T ss_dssp SGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred ccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcC
Confidence 99999999999999999999865543221 122234567999999888889999999999999999999 99999776
Q ss_pred hhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 689 EVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
....+...+.. .. . +.....++ ..+.+++.+||+.||++|||+.|+++++.....
T Consensus 264 ~~~~~~~~~~~---~~----~----~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~ 318 (334)
T 2pvf_A 264 PVEELFKLLKE---GH----R----MDKPANCT----NELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318 (334)
T ss_dssp CHHHHHHHHHH---TC----C----CCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhc---CC----C----CCCCccCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 55443332221 10 0 11111222 356778889999999999999999999975543
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-39 Score=341.13 Aligned_cols=252 Identities=18% Similarity=0.286 Sum_probs=204.3
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC---ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH---STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~---~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|...+.||+|+||.||+|+.. +++.||+|++...... ..+.+.+|++++++++||||+++++++.. .
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-------~ 87 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED-------N 87 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC-------S
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeecc-------C
Confidence 45778899999999999999965 5889999998765332 24678999999999999999999999865 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..++||||+++|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 88 ~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~ 161 (294)
T 2rku_A 88 DFVFVVLELCRRRSLLELHKRR---KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGL 161 (294)
T ss_dssp SEEEEEEECCTTCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred CEEEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccC
Confidence 5689999999999999998753 3589999999999999999999997 999999999999999999999999999
Q ss_pred ccccccc-cccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 633 PLLAENA-EKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 633 ~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
+...... .......++..|+|||......++.++||||||+++|||++|+.||...........+ .. ..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~---~~-~~------ 231 (294)
T 2rku_A 162 ATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI---KK-NE------ 231 (294)
T ss_dssp CEECCSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH---HT-TC------
T ss_pred ceecccCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---hh-cc------
Confidence 8654322 2223345678899999998888999999999999999999999999765443322111 11 10
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
........ ..+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 232 --~~~~~~~~----~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~ 271 (294)
T 2rku_A 232 --YSIPKHIN----PVAASLIQKMLQTDPTARPTINELLNDEFFTS 271 (294)
T ss_dssp --CCCCTTSC----HHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHT
T ss_pred --CCCccccC----HHHHHHHHHHcccChhhCcCHHHHhhChheec
Confidence 01111111 34667888999999999999999999999864
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-39 Score=340.05 Aligned_cols=246 Identities=20% Similarity=0.315 Sum_probs=195.5
Q ss_pred cCCCccCccCCCCCceeEEEEec-CC-------cEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeecccc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NG-------TFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFD 548 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g-------~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~ 548 (786)
++|...+.||+|+||.||+|+.. ++ ..||+|++........+.|.+|++++++++||||+++++++..
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---- 83 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVC---- 83 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECC----
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEe----
Confidence 46778899999999999999854 34 5799999987665667889999999999999999999999865
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCc----
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV---- 624 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~---- 624 (786)
.+..++||||+++|+|.+++.... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.
T Consensus 84 ---~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~ 155 (289)
T 4fvq_A 84 ---GDENILVQEFVKFGSLDTYLKKNK--NCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTG 155 (289)
T ss_dssp ---TTCCEEEEECCTTCBHHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGT
T ss_pred ---CCCCEEEEECCCCCCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCccccc
Confidence 345799999999999999998632 3489999999999999999999998 9999999999999998887
Q ss_pred ----ccccCCCcccccccccccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhC-CCCCCCchhHHHHHHHH
Q 003926 625 ----AKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVG-RPLKSRKEVDLLKNQLQ 698 (786)
Q Consensus 625 ----~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG-~~p~~~~~~~~~~~~~~ 698 (786)
+||+|||++...... ....++..|+|||.+.. ..++.++|||||||++|||++| .+|+.............
T Consensus 156 ~~~~~kl~Dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~ 232 (289)
T 4fvq_A 156 NPPFIKLSDPGISITVLPK---DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYE 232 (289)
T ss_dssp BCCEEEECCCCSCTTTSCH---HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH
T ss_pred ccceeeeccCcccccccCc---cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhh
Confidence 999999998544322 22345677999998876 6699999999999999999995 45555443322221111
Q ss_pred HHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 699 AVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 699 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
.. .. ..+. . ...+.+++.+||+.||++|||+.|+++++.
T Consensus 233 ----~~-~~----~~~~----~----~~~l~~li~~~l~~dp~~Rps~~~ll~~l~ 271 (289)
T 4fvq_A 233 ----DR-HQ----LPAP----K----AAELANLINNCMDYEPDHRPSFRAIIRDLN 271 (289)
T ss_dssp ----TT-CC----CCCC----S----SCTTHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred ----cc-CC----CCCC----C----CHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 10 00 0111 1 123567888999999999999999999996
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-39 Score=341.52 Aligned_cols=257 Identities=18% Similarity=0.334 Sum_probs=199.9
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
.+.|+..+.||+|+||.||+|+.. +|+.||+|++........+.|.+|++++++++||||+++++++.. .+.
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~~ 90 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYH-------DGK 90 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-------C-C
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeee-------CCe
Confidence 456888899999999999999975 589999999987666667889999999999999999999999875 356
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++||||+++|+|.+++... ...+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++.
T Consensus 91 ~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 165 (302)
T 2j7t_A 91 LWIMIEFCPGGAVDAIMLEL--DRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSA 165 (302)
T ss_dssp EEEEEECCTTEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHH
T ss_pred EEEEEEeCCCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCc
Confidence 89999999999999998753 23589999999999999999999997 99999999999999999999999999974
Q ss_pred cccc-ccccccccccccccCcccc-----ccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccc
Q 003926 635 LAEN-AEKVGHVIPYSGSIDPTNS-----ARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESAR 708 (786)
Q Consensus 635 ~~~~-~~~~~~~~~~~~~~aPe~~-----~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (786)
.... ........++..|+|||.. ....++.++||||||+++|||++|++|+...........+ .... .
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~~~---~ 239 (302)
T 2j7t_A 166 KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKI---AKSD---P 239 (302)
T ss_dssp HHHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH---HHSC---C
T ss_pred cccccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHH---hccC---C
Confidence 3321 1122234567889999987 3567899999999999999999999999765433221111 1111 0
Q ss_pred cccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 709 RSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 709 ~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.....+ ..+ ...+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 240 ~~~~~~---~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~ 281 (302)
T 2j7t_A 240 PTLLTP---SKW----SVEFRDFLKIALDKNPETRPSAAQLLEHPFVSS 281 (302)
T ss_dssp CCCSSG---GGS----CHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTT
T ss_pred cccCCc---ccc----CHHHHHHHHHHcccChhhCCCHHHHhcChHHhh
Confidence 111111 111 235668888999999999999999999888653
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-39 Score=348.73 Aligned_cols=260 Identities=19% Similarity=0.325 Sum_probs=204.7
Q ss_pred HHHHHHhcCCCccCccCCCCCceeEEEEec------CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeee
Q 003926 470 EELEEATNNFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHC 542 (786)
Q Consensus 470 ~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~ 542 (786)
++++...++|...+.||+|+||.||+|+.. +++.||||++..... .....|.+|++++++++||||+++++++
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 97 (322)
T 1p4o_A 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 97 (322)
T ss_dssp CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence 344455678889999999999999999854 378899999975432 2245699999999999999999999988
Q ss_pred eeccccCCCCceEEEEEecCCCCChhHHhhcCC-------CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCC
Q 003926 543 FECYFDDSSVSRIFLIFEYVPNGTLRSWISEGH-------AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKIT 615 (786)
Q Consensus 543 ~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~-------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~ 615 (786)
.. .+..++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+. +|+||||||+
T Consensus 98 ~~-------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~ 167 (322)
T 1p4o_A 98 SQ-------GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAAR 167 (322)
T ss_dssp CS-------SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGG
T ss_pred cc-------CCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccc
Confidence 64 346899999999999999987421 123578999999999999999999998 9999999999
Q ss_pred ceeecCCCcccccCCCcccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhH
Q 003926 616 DILLDQNLVAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVD 691 (786)
Q Consensus 616 NILld~~~~~kl~DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~ 691 (786)
||+++.++.+||+|||+++....... .....++..|+|||......++.++||||||+++|||+| |++|+......
T Consensus 168 NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~ 247 (322)
T 1p4o_A 168 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 247 (322)
T ss_dssp GEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH
T ss_pred eEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH
Confidence 99999999999999999865433221 122234567999999988889999999999999999999 88998765544
Q ss_pred HHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 692 LLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
.....+. ... .. .....+ ...+.+++.+||+.||++|||+.|+++++.
T Consensus 248 ~~~~~~~---~~~---~~-----~~~~~~----~~~l~~li~~~l~~dp~~Rps~~e~l~~L~ 295 (322)
T 1p4o_A 248 QVLRFVM---EGG---LL-----DKPDNC----PDMLFELMRMCWQYNPKMRPSFLEIISSIK 295 (322)
T ss_dssp HHHHHHH---TTC---CC-----CCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHG
T ss_pred HHHHHHH---cCC---cC-----CCCCCC----CHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 3322211 110 00 011112 235667888999999999999999999986
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-40 Score=343.31 Aligned_cols=259 Identities=19% Similarity=0.309 Sum_probs=203.1
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.++|+..+.||+|+||.||+|+.. +|+.||+|++...... ..+.|.+|++++++++||||+++++++... ..
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~ 79 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDR-----TN 79 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEG-----GG
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecC-----CC
Confidence 356888899999999999999965 6899999999765432 246799999999999999999999987642 23
Q ss_pred ceEEEEEecCCCCChhHHhhcCC-CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCC-----ccccCCCCCceeecCCCccc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGH-AHQSLTWTQRISAAIGVAKGIQFLHTGIVPG-----VFSNNLKITDILLDQNLVAK 626 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~-----ivHrdlk~~NILld~~~~~k 626 (786)
...++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+|
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~k 156 (279)
T 2w5a_A 80 TTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVK 156 (279)
T ss_dssp TEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEE
T ss_pred ceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEE
Confidence 56899999999999999997531 224589999999999999999999997 5 99999999999999999999
Q ss_pred ccCCCcccccccccc-cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcc
Q 003926 627 ISSYNLPLLAENAEK-VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADE 705 (786)
Q Consensus 627 l~DfGl~~~~~~~~~-~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 705 (786)
|+|||++........ .....++..|+|||......++.++||||||+++|||++|++||.......+...+.. ..
T Consensus 157 l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~---~~- 232 (279)
T 2w5a_A 157 LGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE---GK- 232 (279)
T ss_dssp ECCCCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---TC-
T ss_pred EecCchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhh---cc-
Confidence 999999865543221 2234567789999999888899999999999999999999999987654333222211 10
Q ss_pred ccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 706 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
. +.+...+ ...+.+++.+||+.||++|||+.||++++|+.+
T Consensus 233 --~-----~~~~~~~----~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~ 273 (279)
T 2w5a_A 233 --F-----RRIPYRY----SDELNEIITRMLNLKDYHRPSVEEILENPLILE 273 (279)
T ss_dssp --C-----CCCCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCG
T ss_pred --c-----ccCCccc----CHHHHHHHHHHcCCCcccCCCHHHHHhChhhhh
Confidence 0 0111112 235667888999999999999999999887543
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-40 Score=363.17 Aligned_cols=257 Identities=12% Similarity=0.154 Sum_probs=193.0
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccC---CCChHHHHHHH---HHHhcCCCCCcceeeeeeeecc--
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKK---CHSTRNFMHHI---ELISKLRHRHLVSALGHCFECY-- 546 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~---~~l~~l~H~NIv~l~g~~~~~~-- 546 (786)
.++|...+.||+|+||+||+|+. .+|+.||||++.... ....+.|.+|+ +++++++|||||++++.+....
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 45688889999999999999995 579999999997542 22347799999 5666678999999995443200
Q ss_pred ccCCC----------Cc-----eEEEEEecCCCCChhHHhhcCCC----CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCc
Q 003926 547 FDDSS----------VS-----RIFLIFEYVPNGTLRSWISEGHA----HQSLTWTQRISAAIGVAKGIQFLHTGIVPGV 607 (786)
Q Consensus 547 ~~~~~----------~~-----~~~LV~Ey~~~GsL~~~l~~~~~----~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~i 607 (786)
+.+.+ .+ ..|+||||+ +|+|.+++..... ...++|..++.++.|+++||+|||+. +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 00000 00 378999999 6899999975211 12355788899999999999999998 99
Q ss_pred cccCCCCCceeecCCCcccccCCCcccccccccccccccccccccCccccccC-----------CCCcccceeehhHHHH
Q 003926 608 FSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARG-----------KLEEKIDIYDFGLILL 676 (786)
Q Consensus 608 vHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~-----------~~t~ksDVwSfGvvl~ 676 (786)
+||||||+|||++.++.+||+|||+++.... ......+ ..|+|||.+... .++.++|||||||++|
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~--~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~ 304 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA--RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIY 304 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC--EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC--cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHH
Confidence 9999999999999999999999999875432 2233455 889999998877 7999999999999999
Q ss_pred HHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 677 EIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 677 ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
||+||+.||........ ...+.. . ...++ ..+.+++.+||+.||++|||+.|+++|+||.
T Consensus 305 elltg~~Pf~~~~~~~~--------------~~~~~~-~-~~~~~----~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~ 364 (377)
T 3byv_A 305 WIWCADLPITKDAALGG--------------SEWIFR-S-CKNIP----QPVRALLEGFLRYPKEDRLLPLQAMETPEYE 364 (377)
T ss_dssp HHHHSSCCC------CC--------------SGGGGS-S-CCCCC----HHHHHHHHHHTCSSGGGCCCHHHHHTSHHHH
T ss_pred HHHHCCCCCcccccccc--------------hhhhhh-h-ccCCC----HHHHHHHHHHcCCCchhCCCHHHHhhChHHH
Confidence 99999999864322110 000000 0 01122 3566888899999999999999999999988
Q ss_pred HHh
Q 003926 757 AQV 759 (786)
Q Consensus 757 ~~~ 759 (786)
...
T Consensus 365 ~~~ 367 (377)
T 3byv_A 365 QLR 367 (377)
T ss_dssp HHH
T ss_pred HHH
Confidence 643
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-38 Score=343.42 Aligned_cols=256 Identities=18% Similarity=0.330 Sum_probs=198.4
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcE----EEEEEecccC-CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTF----VAIRCLKMKK-CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~----vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
++|+..+.||+|+||.||+|+.. +++. ||+|.+.... ....+.|.+|++++++++||||++++++|..
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~------ 88 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT------ 88 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEES------
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEec------
Confidence 56888899999999999999954 4543 5778776443 3456789999999999999999999999874
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
+..++|+||+++|+|.+++.... ..+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+||
T Consensus 89 --~~~~~v~~~~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~Df 161 (327)
T 3lzb_A 89 --STVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDF 161 (327)
T ss_dssp --SSEEEEECCCSSCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCT
T ss_pred --CCceEEEEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccC
Confidence 23789999999999999997642 3589999999999999999999997 9999999999999999999999999
Q ss_pred Cccccccccccc---ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccc
Q 003926 631 NLPLLAENAEKV---GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADES 706 (786)
Q Consensus 631 Gl~~~~~~~~~~---~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (786)
|+++........ ....++..|+|||.+....++.++|||||||++|||++ |++||.......+...+... .
T Consensus 162 G~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~---~-- 236 (327)
T 3lzb_A 162 GLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG---E-- 236 (327)
T ss_dssp TC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT---C--
T ss_pred cceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcC---C--
Confidence 999765332211 12234557999999988899999999999999999999 99999876555443332210 0
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~ 760 (786)
. ......+ ...+.+++.+||+.||++||++.|+++.+.......
T Consensus 237 --~----~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 280 (327)
T 3lzb_A 237 --R----LPQPPIC----TIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDP 280 (327)
T ss_dssp --C----CCCCTTB----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSH
T ss_pred --C----CCCCccC----CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCc
Confidence 0 0011112 234667888999999999999999999998665443
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-39 Score=337.72 Aligned_cols=257 Identities=19% Similarity=0.335 Sum_probs=200.5
Q ss_pred hcCCCccCccCCCCCceeEEEEecC----CcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLKN----GTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~~----g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
.++|...+.||+|+||.||+|+... +..||||.+..... ...+.|.+|++++++++||||+++++++.+
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------ 84 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE------ 84 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS------
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC------
Confidence 4567888999999999999998542 34699999876532 235679999999999999999999998753
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
+..++||||+++|+|.+++... ...+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+||
T Consensus 85 --~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Df 157 (281)
T 3cc6_A 85 --EPTWIIMELYPYGELGHYLERN--KNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDF 157 (281)
T ss_dssp --SSCEEEEECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCC
T ss_pred --CCCEEEEecCCCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCcc
Confidence 3468999999999999999753 23589999999999999999999997 9999999999999999999999999
Q ss_pred Ccccccccccc--cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccc
Q 003926 631 NLPLLAENAEK--VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESA 707 (786)
Q Consensus 631 Gl~~~~~~~~~--~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (786)
|++........ .....++..|+|||......++.++||||||+++|||+| |+.||...........+.. ...
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~---~~~-- 232 (281)
T 3cc6_A 158 GLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEK---GDR-- 232 (281)
T ss_dssp CGGGCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHH---TCC--
T ss_pred CCCcccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhc---CCC--
Confidence 99865543221 122334567999999988889999999999999999998 9999875444333222211 100
Q ss_pred ccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 003926 708 RRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760 (786)
Q Consensus 708 ~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~ 760 (786)
+.....+ ...+.+++.+||+.||++|||+.|+++++....+..
T Consensus 233 ------~~~~~~~----~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 275 (281)
T 3cc6_A 233 ------LPKPDLC----PPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME 275 (281)
T ss_dssp ------CCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ------CCCCCCC----CHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhh
Confidence 0011112 234668888999999999999999999998665443
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-39 Score=349.48 Aligned_cols=270 Identities=16% Similarity=0.238 Sum_probs=198.9
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.+.|...+.||+|+||.||+|+. .+|+.||||++...... ..+.+.+|++++++++|||||++++++...... ...
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~-~~~ 102 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETL-DDF 102 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSST-TTC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCcc-ccC
Confidence 35688889999999999999996 47999999998654322 246789999999999999999999988642110 112
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
...|+||||+ +++|.+++.. ..+++.....++.|+++||.|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 174 (367)
T 1cm8_A 103 TDFYLVMPFM-GTDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGL 174 (367)
T ss_dssp CCCEEEEECC-SEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeec
Confidence 4579999999 7899999975 2589999999999999999999998 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHH-HHHHHHHHHHhccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL-LKNQLQAVVTADESARRS 710 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~ 710 (786)
++..... .....++..|+|||.+.. ..++.++||||+||++|||++|++||...+... +.................
T Consensus 175 a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~ 252 (367)
T 1cm8_A 175 ARQADSE--MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQR 252 (367)
T ss_dssp CEECCSS--CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHT
T ss_pred ccccccc--cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 8765432 233456788999998876 679999999999999999999999997654332 222222111110000000
Q ss_pred ---------------cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 711 ---------------MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 711 ---------------~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
...... ..........+.+++.+||+.||++|||+.|+++|+||..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~ 313 (367)
T 1cm8_A 253 LQSDEAKNYMKGLPELEKKDF-ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFES 313 (367)
T ss_dssp CSCHHHHHHHHHSCCCCCCCG-GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTT
T ss_pred hhhHHHHHHHHhCCCCCCCCH-HHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHh
Confidence 000000 0111122345778889999999999999999999999864
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-39 Score=338.97 Aligned_cols=254 Identities=20% Similarity=0.349 Sum_probs=184.5
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
.++|...+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|++++++++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------- 82 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFED------- 82 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEEC-------
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEcc-------
Confidence 35688889999999999999996 579999999997542 2335779999999999999999999999865
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
.+..++||||+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 83 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg 157 (278)
T 3cok_A 83 SNYVYLVLEMCHNGEMNRYLKNR--VKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFG 157 (278)
T ss_dssp SSEEEEEEECCTTEEHHHHHHTC--SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCT
T ss_pred CCeEEEEEecCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeec
Confidence 45689999999999999999863 24689999999999999999999998 99999999999999999999999999
Q ss_pred cccccccc-cccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 632 LPLLAENA-EKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 632 l~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
++...... .......++..|+|||......++.++||||||+++|||++|++||.......... .. ..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~---~~------~~-- 226 (278)
T 3cok_A 158 LATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLN---KV------VL-- 226 (278)
T ss_dssp TCEECC----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC--------C------CS--
T ss_pred ceeeccCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHH---HH------hh--
Confidence 98654322 12223456778999999988889999999999999999999999997543221110 00 00
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.+...+... ...+.+++.+||+.||++|||+.|+++|+|+.+
T Consensus 227 -~~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~ 268 (278)
T 3cok_A 227 -ADYEMPSFL----SIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSR 268 (278)
T ss_dssp -SCCCCCTTS----CHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC-
T ss_pred -cccCCcccc----CHHHHHHHHHHcccCHhhCCCHHHHhcCccccC
Confidence 011111111 235668888999999999999999999988654
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-39 Score=345.12 Aligned_cols=257 Identities=19% Similarity=0.317 Sum_probs=196.7
Q ss_pred CCCccCccCCCCCceeEEEEe-----cCCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 478 NFDTSAFMGEGSQGQMYRGRL-----KNGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~-----~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
.|+..+.||+|+||.||+|++ .+++.||||+++.... ...+.+.+|++++++++||||+++++++... .
T Consensus 22 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~ 96 (302)
T 4e5w_A 22 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTED-----G 96 (302)
T ss_dssp GEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-------
T ss_pred hhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecC-----C
Confidence 467789999999999999984 3689999999985543 3457899999999999999999999998752 2
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
....++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 97 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg 171 (302)
T 4e5w_A 97 GNGIKLIMEFLPSGSLKEYLPKNK--NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFG 171 (302)
T ss_dssp -CCEEEEEECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCT
T ss_pred CceEEEEEEeCCCCcHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECccc
Confidence 355899999999999999996532 3589999999999999999999997 99999999999999999999999999
Q ss_pred cccccccccc----cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHH-----------HHH
Q 003926 632 LPLLAENAEK----VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLL-----------KNQ 696 (786)
Q Consensus 632 l~~~~~~~~~----~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~-----------~~~ 696 (786)
++........ .....++..|+|||......++.++||||||+++|||+||+.|+........ ...
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 251 (302)
T 4e5w_A 172 LTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTR 251 (302)
T ss_dssp TCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHH
T ss_pred ccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHH
Confidence 9866543321 1223455669999999888899999999999999999999988643211100 000
Q ss_pred HHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 697 LQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 697 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
+...... ...... +......+.+++.+||+.||++|||+.|+++.+..
T Consensus 252 ~~~~~~~-------~~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 299 (302)
T 4e5w_A 252 LVNTLKE-------GKRLPC----PPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEA 299 (302)
T ss_dssp HHHHHHT-------TCCCCC----CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHhc-------cCCCCC----CCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHH
Confidence 0000000 000111 11222457788899999999999999999998863
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-39 Score=375.57 Aligned_cols=255 Identities=20% Similarity=0.298 Sum_probs=208.7
Q ss_pred HhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEeccc---CCCChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccC
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMK---KCHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDD 549 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~ 549 (786)
..++|+..+.||+|+||.||+|+.+ +++.||||+++.. .....+.+..|..++..+ +||||+++++++..
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~----- 413 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT----- 413 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBC-----
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEe-----
Confidence 3567899999999999999999965 6899999999754 233456789999999988 79999999987754
Q ss_pred CCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccC
Q 003926 550 SSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISS 629 (786)
Q Consensus 550 ~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 629 (786)
.+..|+||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +||||||||+|||+|.++.+||+|
T Consensus 414 --~~~~~lV~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~D 485 (674)
T 3pfq_A 414 --MDRLYFVMEYVNGGDLMYHIQQV---GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIAD 485 (674)
T ss_dssp --SSEEEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECC
T ss_pred --CCEEEEEEeCcCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEee
Confidence 46789999999999999999863 3589999999999999999999997 999999999999999999999999
Q ss_pred CCcccccc-cccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccc
Q 003926 630 YNLPLLAE-NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESAR 708 (786)
Q Consensus 630 fGl~~~~~-~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (786)
||+++... .........++..|+|||.+....|+.++|||||||++|||++|++||...+...+...+. ...
T Consensus 486 FGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~---~~~---- 558 (674)
T 3pfq_A 486 FGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM---EHN---- 558 (674)
T ss_dssp CTTCEECCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---SSC----
T ss_pred cceeeccccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHH---hCC----
Confidence 99987532 2233445678899999999988899999999999999999999999998765544332221 110
Q ss_pred cccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCH-----HHHHHHHHHHHH
Q 003926 709 RSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSV-----EDVLWNLQFAAQ 758 (786)
Q Consensus 709 ~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~-----~evl~~l~~~~~ 758 (786)
...+. ....++.+++.+||++||++||++ +||++|+||...
T Consensus 559 -----~~~p~----~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i 604 (674)
T 3pfq_A 559 -----VAYPK----SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 604 (674)
T ss_dssp -----CCCCT----TSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSC
T ss_pred -----CCCCc----cCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccCC
Confidence 01111 122356788889999999999998 999999998753
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-38 Score=342.62 Aligned_cols=259 Identities=24% Similarity=0.392 Sum_probs=201.4
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcE--EEEEEecccC-CCChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTF--VAIRCLKMKK-CHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~--vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~~ 551 (786)
++|+..+.||+|+||.||+|+.. +|.. ||||+++... ....+.|.+|+++++++ +||||+++++++..
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~------- 97 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH------- 97 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEE-------
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeee-------
Confidence 56788899999999999999964 5664 4999887532 23456799999999999 99999999999875
Q ss_pred CceEEEEEecCCCCChhHHhhcCC-------------CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCcee
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGH-------------AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDIL 618 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~-------------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NIL 618 (786)
.+..++||||+++|+|.+++.... ....+++..++.++.|++.||.|||+. +|+||||||+||+
T Consensus 98 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl 174 (327)
T 1fvr_A 98 RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNIL 174 (327)
T ss_dssp TTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred CCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEE
Confidence 456899999999999999997642 123689999999999999999999997 9999999999999
Q ss_pred ecCCCcccccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHH
Q 003926 619 LDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQL 697 (786)
Q Consensus 619 ld~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~ 697 (786)
++.++.+||+|||+++............++..|+|||......++.++|||||||++|||+| |+.||...........+
T Consensus 175 ~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~ 254 (327)
T 1fvr_A 175 VGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL 254 (327)
T ss_dssp ECGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHG
T ss_pred EcCCCeEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHh
Confidence 99999999999999864433222233345567999999888889999999999999999998 99999765543322211
Q ss_pred HHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 003926 698 QAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760 (786)
Q Consensus 698 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~ 760 (786)
... ..+.....++ ..+.+++.+||+.||++|||+.|+++++......+
T Consensus 255 ----~~~-------~~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 302 (327)
T 1fvr_A 255 ----PQG-------YRLEKPLNCD----DEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 302 (327)
T ss_dssp ----GGT-------CCCCCCTTBC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred ----hcC-------CCCCCCCCCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence 100 0011111122 35678888999999999999999999998655433
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-39 Score=339.35 Aligned_cols=255 Identities=20% Similarity=0.362 Sum_probs=205.9
Q ss_pred HhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
..++|+..+.||+|+||.||+|+.. ++..||||++.... ...+.|.+|++++++++||||+++++++.. .+
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------~~ 82 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTR-------EP 82 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECS-------SS
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEcc-------CC
Confidence 4567888899999999999999976 58899999997543 345789999999999999999999998864 45
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 83 ~~~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~ 158 (288)
T 3kfa_A 83 PFYIITEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLS 158 (288)
T ss_dssp SEEEEEECCTTEEHHHHHHHCC-TTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGG
T ss_pred CEEEEEEcCCCCcHHHHHHhcc-cCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccc
Confidence 6899999999999999997642 34689999999999999999999997 9999999999999999999999999998
Q ss_pred cccccccc--cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 634 LLAENAEK--VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 634 ~~~~~~~~--~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
........ .....++..|+|||......++.++||||||+++|||++ |++||...........+.. .
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~---~------- 228 (288)
T 3kfa_A 159 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---D------- 228 (288)
T ss_dssp GTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHT---T-------
T ss_pred eeccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhc---c-------
Confidence 76543221 122334567999999988899999999999999999999 9999977655443332211 0
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
..+.....+ ...+.+++.+||+.||++|||+.|+++.+...
T Consensus 229 -~~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~ 269 (288)
T 3kfa_A 229 -YRMERPEGC----PEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269 (288)
T ss_dssp -CCCCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -CCCCCCCCC----CHHHHHHHHHHhCCChhhCcCHHHHHHHHHHH
Confidence 001111112 23567888899999999999999999888643
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-39 Score=337.71 Aligned_cols=256 Identities=23% Similarity=0.329 Sum_probs=198.7
Q ss_pred CCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 479 FDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
|...+.||+|+||.||+|... ++..||+|++...... ..+.|.+|++++++++||||+++++++.... ......
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~---~~~~~~ 104 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV---KGKKCI 104 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEES---SSCEEE
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecccc---CCCceE
Confidence 556778999999999999864 6889999998765432 3467999999999999999999999886421 224568
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeec-CCCcccccCCCccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD-QNLVAKISSYNLPL 634 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld-~~~~~kl~DfGl~~ 634 (786)
++||||+++|+|.+++... ..+++..+..++.|++.||.|||+. .++|+||||||+||+++ .++.+||+|||++.
T Consensus 105 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~ 180 (290)
T 1t4h_A 105 VLVTELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp EEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred EEEEEecCCCCHHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHcC-CCCEEECCCCHHHEEEECCCCCEEEeeCCCcc
Confidence 9999999999999999753 3589999999999999999999997 12399999999999998 78999999999986
Q ss_pred ccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchh-HHHHHHHHHHHHhcccccccccc
Q 003926 635 LAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVVTADESARRSMVD 713 (786)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d 713 (786)
...... .....++..|+|||.+. +.++.++|||||||++|||++|+.||..... ......+ ... ...
T Consensus 181 ~~~~~~-~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~---~~~-------~~~ 248 (290)
T 1t4h_A 181 LKRASF-AKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRV---TSG-------VKP 248 (290)
T ss_dssp GCCTTS-BEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHH---TTT-------CCC
T ss_pred cccccc-cccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHH---hcc-------CCc
Confidence 543322 23345778899999775 5699999999999999999999999975332 2211111 000 001
Q ss_pred ccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 714 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.......+ ..+.+++.+||+.||++|||+.|+++|+||.+
T Consensus 249 ~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~ 288 (290)
T 1t4h_A 249 ASFDKVAI----PEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288 (290)
T ss_dssp GGGGGCCC----HHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred cccCCCCC----HHHHHHHHHHccCChhhCCCHHHHhhCccccc
Confidence 11111111 34678888999999999999999999998754
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-39 Score=341.04 Aligned_cols=259 Identities=16% Similarity=0.248 Sum_probs=188.1
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCC--hHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHS--TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~--~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.++|+..+.||+|+||.||+|+. .+|+.||||+++...... .+.+.++...++.++||||+++++++.. .
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~-------~ 78 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR-------E 78 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC-------S
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeec-------c
Confidence 45688899999999999999996 479999999997653221 2334555566888999999999999875 3
Q ss_pred ceEEEEEecCCCCChhHHhhcC-CCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 553 SRIFLIFEYVPNGTLRSWISEG-HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
+..++||||++ |+|.+++... .....+++..+..++.|++.||+|||+. .+|+||||||+||+++.++.+||+|||
T Consensus 79 ~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg 155 (290)
T 3fme_A 79 GDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFG 155 (290)
T ss_dssp SSEEEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH--SCCCCCCCSGGGCEECTTCCEEBCCC-
T ss_pred CCEEEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeecC
Confidence 56899999998 5888877531 1234699999999999999999999984 289999999999999999999999999
Q ss_pred cccccccccccccccccccccCcccc----ccCCCCcccceeehhHHHHHHHhCCCCCCCchh--HHHHHHHHHHHHhcc
Q 003926 632 LPLLAENAEKVGHVIPYSGSIDPTNS----ARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEV--DLLKNQLQAVVTADE 705 (786)
Q Consensus 632 l~~~~~~~~~~~~~~~~~~~~aPe~~----~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~--~~~~~~~~~~~~~~~ 705 (786)
++.............++..|+|||.+ ....++.++|||||||++|||+||+.||..... ...... ....
T Consensus 156 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~----~~~~- 230 (290)
T 3fme_A 156 ISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV----VEEP- 230 (290)
T ss_dssp --------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHH----HHSC-
T ss_pred CcccccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHH----hccC-
Confidence 98765444333444677889999985 456789999999999999999999999975322 111111 1111
Q ss_pred ccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 003926 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQV 759 (786)
Q Consensus 706 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~ 759 (786)
... ... ......+.+++.+||+.||++|||+.|+++|+||....
T Consensus 231 --~~~-----~~~---~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~~ 274 (290)
T 3fme_A 231 --SPQ-----LPA---DKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHE 274 (290)
T ss_dssp --CCC-----CCT---TTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHH
T ss_pred --CCC-----ccc---ccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcccccCc
Confidence 000 000 11123567888899999999999999999999998653
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-38 Score=341.36 Aligned_cols=262 Identities=23% Similarity=0.373 Sum_probs=201.9
Q ss_pred hcCCCccCccCCCCCceeEEEEe------cCCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeecccc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL------KNGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFD 548 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~ 548 (786)
.++|...+.||+|+||.||+|+. .++..||||++..... ....+|.+|+.++++++||||+++++++..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---- 104 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ---- 104 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS----
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcC----
Confidence 35688899999999999999984 2477999999974432 234679999999999999999999999865
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCCC----CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC---
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGHA----HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ--- 621 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~~----~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~--- 621 (786)
....++||||+++|+|.+++..... ...+++..++.++.|++.||.|||+. +|+||||||+||+++.
T Consensus 105 ---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~ 178 (327)
T 2yfx_A 105 ---SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGP 178 (327)
T ss_dssp ---SSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSST
T ss_pred ---CCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCC
Confidence 3457999999999999999986431 13589999999999999999999997 9999999999999994
Q ss_pred CCcccccCCCccccccccc---ccccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHH
Q 003926 622 NLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQL 697 (786)
Q Consensus 622 ~~~~kl~DfGl~~~~~~~~---~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~ 697 (786)
+..+||+|||++....... ......++..|+|||.+....++.++||||||+++|||+| |+.||...........+
T Consensus 179 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~ 258 (327)
T 2yfx_A 179 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 258 (327)
T ss_dssp TCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH
T ss_pred cceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHH
Confidence 4569999999986443221 1223345678999999988889999999999999999998 99999765544332222
Q ss_pred HHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhhhh
Q 003926 698 QAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDA 762 (786)
Q Consensus 698 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~~~ 762 (786)
.. .. . +.....++ ..+.+++.+||+.||++||++.||+++++.....+..
T Consensus 259 ~~---~~----~----~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~~~ 308 (327)
T 2yfx_A 259 TS---GG----R----MDPPKNCP----GPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 308 (327)
T ss_dssp HT---TC----C----CCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHHH
T ss_pred hc---CC----C----CCCCCCCC----HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCHHH
Confidence 11 10 0 01111122 3566788899999999999999999999987664433
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=342.99 Aligned_cols=276 Identities=18% Similarity=0.286 Sum_probs=207.8
Q ss_pred HhcCCCccCccCCCCCceeEEEEe--cCCcEEEEEEecccCC--CChHHHHHHHHHHhcC---CCCCcceeeeeeeeccc
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRL--KNGTFVAIRCLKMKKC--HSTRNFMHHIELISKL---RHRHLVSALGHCFECYF 547 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~--~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l---~H~NIv~l~g~~~~~~~ 547 (786)
+.++|...+.||+|+||.||+|+. .+|+.||||+++.... .....+.+|+++++++ +||||++++++|.....
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 456788999999999999999997 3688999999875432 2234677888887766 89999999999863211
Q ss_pred cCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccc
Q 003926 548 DDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKI 627 (786)
Q Consensus 548 ~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl 627 (786)
......++||||++ |+|.+++.... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||
T Consensus 89 --~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl 161 (326)
T 1blx_A 89 --DRETKLTLVFEHVD-QDLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKL 161 (326)
T ss_dssp --SSEEEEEEEEECCS-CBHHHHHHHSC-TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEE
T ss_pred --CCCceEEEEEecCC-CCHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEE
Confidence 12456899999998 69999997642 23589999999999999999999997 9999999999999999999999
Q ss_pred cCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHH-HHHHHHHHHhccc
Q 003926 628 SSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLL-KNQLQAVVTADES 706 (786)
Q Consensus 628 ~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~-~~~~~~~~~~~~~ 706 (786)
+|||++.............++..|+|||......++.++|||||||++|||++|++||........ ...+.........
T Consensus 162 ~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 241 (326)
T 1blx_A 162 ADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 241 (326)
T ss_dssp CSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGG
T ss_pred ecCcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcc
Confidence 999998765443334445677889999999888899999999999999999999999976544332 2222211111111
Q ss_pred cccccc-------c---ccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 707 ARRSMV-------D---PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 707 ~~~~~~-------d---~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.+.... . ..............+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~ 302 (326)
T 1blx_A 242 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD 302 (326)
T ss_dssp GSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTT
T ss_pred cCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccc
Confidence 110000 0 00000111122345668888999999999999999999998764
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-39 Score=359.95 Aligned_cols=274 Identities=17% Similarity=0.230 Sum_probs=198.9
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.++|...+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|++++++++|||||++++++..... ...
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~--~~~ 102 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDL--LKF 102 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCT--TTC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCC--CcC
Confidence 357888999999999999999964 6899999999754322 24679999999999999999999998865221 112
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
...|+||||++ |+|.+++... ..+++..+..++.|+++||.|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 103 ~~~~lv~e~~~-~~L~~~~~~~---~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGl 175 (432)
T 3n9x_A 103 DELYIVLEIAD-SDLKKLFKTP---IFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGL 175 (432)
T ss_dssp CCEEEEEECCS-EEHHHHHHSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred CeEEEEEecCC-cCHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCC
Confidence 56899999997 5999999753 3589999999999999999999998 999999999999999999999999999
Q ss_pred cccccccc-----------------------ccccccccccccCcccc-ccCCCCcccceeehhHHHHHHHhCC------
Q 003926 633 PLLAENAE-----------------------KVGHVIPYSGSIDPTNS-ARGKLEEKIDIYDFGLILLEIIVGR------ 682 (786)
Q Consensus 633 ~~~~~~~~-----------------------~~~~~~~~~~~~aPe~~-~~~~~t~ksDVwSfGvvl~ElltG~------ 682 (786)
++...... ......++..|+|||.+ ....|+.++||||+||++|||++|.
T Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~ 255 (432)
T 3n9x_A 176 ARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHIND 255 (432)
T ss_dssp CEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSS
T ss_pred cccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccc
Confidence 97653221 12345678889999985 4566999999999999999999853
Q ss_pred -----CCCCCch------------------hHHHHHHHHHHHHhcccccccccc-----------cccc---ccCcHHHH
Q 003926 683 -----PLKSRKE------------------VDLLKNQLQAVVTADESARRSMVD-----------PAVN---KACLDESL 725 (786)
Q Consensus 683 -----~p~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~d-----------~~~~---~~~~~~~~ 725 (786)
++|.+.. .+.+...+.............+.. .... ........
T Consensus 256 ~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 335 (432)
T 3n9x_A 256 PTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSIS 335 (432)
T ss_dssp GGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSC
T ss_pred cccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCC
Confidence 4443221 111111111111100000000000 0000 00001123
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 726 KTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 726 ~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
..+.+++.+||+.||++|||+.|+++|+||...
T Consensus 336 ~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~ 368 (432)
T 3n9x_A 336 DDGINLLESMLKFNPNKRITIDQALDHPYLKDV 368 (432)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTT
T ss_pred HHHHHHHHHHhcCCcccCCCHHHHhcChhhhhc
Confidence 456788899999999999999999999998764
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-39 Score=359.29 Aligned_cols=269 Identities=18% Similarity=0.244 Sum_probs=202.0
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcC------CCCCcceeeeeeeecccc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKL------RHRHLVSALGHCFECYFD 548 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l------~H~NIv~l~g~~~~~~~~ 548 (786)
..+|+..+.||+|+||+||+|+.. +++.||||+++... ...+++.+|+++++.+ +|+||+++++++..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~---- 170 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTF---- 170 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEE----
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeeccc----
Confidence 346888999999999999999865 68999999997532 2245678888888876 57799999998875
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCc--cc
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV--AK 626 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~--~k 626 (786)
.+..++||||++ |+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +|
T Consensus 171 ---~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vk 242 (429)
T 3kvw_A 171 ---RNHICMTFELLS-MNLYELIKKNK-FQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIK 242 (429)
T ss_dssp ---TTEEEEEECCCC-CBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEE
T ss_pred ---CCeEEEEEeccC-CCHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceE
Confidence 457899999997 69999987643 24589999999999999999999997 9999999999999999887 99
Q ss_pred ccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccc
Q 003926 627 ISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADES 706 (786)
Q Consensus 627 l~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (786)
|+|||+++.... ......++..|+|||.+....|+.++|||||||++|||+||++||...........+.........
T Consensus 243 L~DFG~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~ 320 (429)
T 3kvw_A 243 VIDFGSSCYEHQ--RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQ 320 (429)
T ss_dssp ECCCTTCEETTC--CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCH
T ss_pred EeecccceecCC--cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCH
Confidence 999999865432 223446778899999998888999999999999999999999999765543322222211111000
Q ss_pred cc-------ccccc--------------------------------ccccccC----cHHHHHHHHHHHHHhccCCCCCC
Q 003926 707 AR-------RSMVD--------------------------------PAVNKAC----LDESLKTMMEVCVRCLLKNPAER 743 (786)
Q Consensus 707 ~~-------~~~~d--------------------------------~~~~~~~----~~~~~~~~~~l~~~Cl~~dP~~R 743 (786)
.. ...++ +...... .......+.+++.+||+.||++|
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~R 400 (429)
T 3kvw_A 321 KLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVR 400 (429)
T ss_dssp HHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTS
T ss_pred HHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhC
Confidence 00 00000 0000000 00012457789999999999999
Q ss_pred CCHHHHHHHHHHHHHh
Q 003926 744 PSVEDVLWNLQFAAQV 759 (786)
Q Consensus 744 Pt~~evl~~l~~~~~~ 759 (786)
||+.|+++|+|+.+..
T Consensus 401 pta~e~L~Hpw~~~~~ 416 (429)
T 3kvw_A 401 MTPGQALRHPWLRRRL 416 (429)
T ss_dssp CCHHHHHTSTTTC---
T ss_pred CCHHHHhCChhhccCC
Confidence 9999999999987643
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-38 Score=371.13 Aligned_cols=243 Identities=19% Similarity=0.292 Sum_probs=194.5
Q ss_pred CccCCCCCceeEEEEec---CCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEE
Q 003926 483 AFMGEGSQGQMYRGRLK---NGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFL 557 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~L 557 (786)
+.||+|+||.||+|.+. +++.||||+++.... ...++|.+|+++|++++|||||+++|+|.. +..++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--------~~~~l 446 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA--------ESWML 446 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES--------SSEEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec--------CCEEE
Confidence 47999999999999753 468899999986543 235789999999999999999999998853 34789
Q ss_pred EEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccc
Q 003926 558 IFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637 (786)
Q Consensus 558 V~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~ 637 (786)
|||||++|+|.+++... ..+++..++.++.|++.||+|||+. +||||||||+|||++.++.+||+|||+++...
T Consensus 447 v~E~~~~g~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~ 520 (635)
T 4fl3_A 447 VMEMAELGPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALR 520 (635)
T ss_dssp EEECCTTEEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTT
T ss_pred EEEccCCCCHHHHHhhC---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccc
Confidence 99999999999999753 3589999999999999999999997 99999999999999999999999999997654
Q ss_pred cccc----cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 638 NAEK----VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 638 ~~~~----~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
.... .....++..|+|||.+....++.++|||||||++|||+| |+.||.......+...+.. . .
T Consensus 521 ~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~----~--~----- 589 (635)
T 4fl3_A 521 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK----G--E----- 589 (635)
T ss_dssp C-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT----T--C-----
T ss_pred cCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc----C--C-----
Confidence 3221 112234567999999988899999999999999999998 9999987655443332221 1 0
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
.+.....++ ..+.+++.+||+.||++||++.+|++.|.
T Consensus 590 ~~~~p~~~~----~~l~~li~~cl~~dP~~RPs~~~l~~~L~ 627 (635)
T 4fl3_A 590 RMGCPAGCP----REMYDLMNLCWTYDVENRPGFAAVELRLR 627 (635)
T ss_dssp CCCCCTTCC----HHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred CCCCCCCCC----HHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 011111222 45678888999999999999999999886
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-38 Score=335.89 Aligned_cols=254 Identities=20% Similarity=0.355 Sum_probs=190.4
Q ss_pred hcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
.++|...+.||+|+||+||+|+... .||||+++..... ..+.|.+|++++++++||||+++++++.. +
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--------~ 92 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA--------P 92 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS--------S
T ss_pred ccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccC--------C
Confidence 4568888999999999999998653 5999999765432 24679999999999999999999997642 4
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++||||+++|+|.+++... ...+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 93 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~ 167 (289)
T 3og7_A 93 QLAIVTQWCEGSSLYHHLHAS--ETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLA 167 (289)
T ss_dssp SCEEEEECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC--
T ss_pred ccEEEEEecCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceec
Confidence 579999999999999999753 24689999999999999999999997 9999999999999999999999999998
Q ss_pred cccccc---cccccccccccccCccccc---cCCCCcccceeehhHHHHHHHhCCCCCCCchh-HHHHHHHHHHHHhccc
Q 003926 634 LLAENA---EKVGHVIPYSGSIDPTNSA---RGKLEEKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVVTADES 706 (786)
Q Consensus 634 ~~~~~~---~~~~~~~~~~~~~aPe~~~---~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~-~~~~~~~~~~~~~~~~ 706 (786)
...... .......++..|+|||.+. ...++.++||||||+++|||++|+.||..... +.+...+.. ..
T Consensus 168 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~---~~-- 242 (289)
T 3og7_A 168 TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR---GS-- 242 (289)
T ss_dssp ----------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHH---TS--
T ss_pred cccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcc---cc--
Confidence 654321 1223345778899999875 56688999999999999999999999976432 222222211 10
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
..... +.....+ ...+.+++.+||+.||++|||+.|+++.++.
T Consensus 243 -~~~~~-~~~~~~~----~~~l~~li~~~l~~~p~~Rps~~ell~~L~~ 285 (289)
T 3og7_A 243 -LSPDL-SKVRSNC----PKRMKRLMAECLKKKRDERPSFPRILAEIEE 285 (289)
T ss_dssp -CCCCT-TSSCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred -cCcch-hhccccC----CHHHHHHHHHHccCChhhCCCHHHHHHHHHH
Confidence 00000 0111122 2457788889999999999999999999863
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-38 Score=337.09 Aligned_cols=256 Identities=20% Similarity=0.336 Sum_probs=200.8
Q ss_pred HhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
..+.|+..+.||+|+||.||+|+.. +|+.||||++.... ..+.+.+|++++++++||||+++++++.. .+
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~ 97 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFK-------NT 97 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEE-------TT
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEe-------CC
Confidence 3567888999999999999999975 58999999987543 45789999999999999999999999875 45
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++||||+++|+|.+++... ...+++..+..++.+++.||.|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 98 ~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 172 (314)
T 3com_A 98 DLWIVMEYCGAGSVSDIIRLR--NKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVA 172 (314)
T ss_dssp EEEEEEECCTTEEHHHHHHHH--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEeecCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccc
Confidence 689999999999999998732 23689999999999999999999997 9999999999999999999999999998
Q ss_pred cccccc-cccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 634 LLAENA-EKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 634 ~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
...... .......++..|+|||......++.++||||||+++|||++|+.||...........+ .... .....
T Consensus 173 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~~~---~~~~~ 246 (314)
T 3com_A 173 GQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMI---PTNP---PPTFR 246 (314)
T ss_dssp EECBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH---HHSC---CCCCS
T ss_pred hhhhhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHH---hcCC---CcccC
Confidence 654332 1223345677899999998888999999999999999999999999765432221111 1110 00000
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.+ ..+ ...+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 247 ~~---~~~----~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~ 284 (314)
T 3com_A 247 KP---ELW----SDNFTDFVKQCLVKSPEQRATATQLLQHPFVRS 284 (314)
T ss_dssp SG---GGS----CHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHT
T ss_pred Cc---ccC----CHHHHHHHHHHccCChhhCcCHHHHHhCHHHhc
Confidence 11 111 235678888999999999999999999999875
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-38 Score=342.79 Aligned_cols=255 Identities=18% Similarity=0.287 Sum_probs=197.4
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC--------CChHHHHHHHHHHhcCCCCCcceeeeeeeecc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC--------HSTRNFMHHIELISKLRHRHLVSALGHCFECY 546 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--------~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~ 546 (786)
.++|...+.||+|+||.||+|+.. +++.||||++..... .....|.+|++++++++||||+++++++..
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-- 86 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-- 86 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEES--
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcC--
Confidence 356888999999999999999965 689999999875432 122458899999999999999999998753
Q ss_pred ccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCc--
Q 003926 547 FDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV-- 624 (786)
Q Consensus 547 ~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~-- 624 (786)
+..++||||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 87 ------~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~ 154 (322)
T 2ycf_A 87 ------EDYYIVLELMEGGELFDKVVGN---KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDC 154 (322)
T ss_dssp ------SSEEEEEECCTTEETHHHHSTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSC
T ss_pred ------CceEEEEecCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCC
Confidence 2379999999999999998753 3689999999999999999999997 9999999999999987654
Q ss_pred -ccccCCCcccccccccccccccccccccCccccc---cCCCCcccceeehhHHHHHHHhCCCCCCCchhH-HHHHHHHH
Q 003926 625 -AKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSA---RGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVD-LLKNQLQA 699 (786)
Q Consensus 625 -~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~---~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~-~~~~~~~~ 699 (786)
+||+|||++.............++..|+|||.+. ...++.++|||||||++|||++|++||...... .+...+..
T Consensus 155 ~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 234 (322)
T 2ycf_A 155 LIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 234 (322)
T ss_dssp CEEECCCTTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHH
T ss_pred eEEEccCccceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHh
Confidence 9999999987654433333445788899999863 466899999999999999999999999754321 22222111
Q ss_pred HHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 700 VVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 700 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
.. . . ..+.... .....+.+++.+||+.||++|||+.|+++|+|+.
T Consensus 235 ----~~--~-~-~~~~~~~----~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~ 279 (322)
T 2ycf_A 235 ----GK--Y-N-FIPEVWA----EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279 (322)
T ss_dssp ----TC--C-C-CCHHHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGC
T ss_pred ----Cc--c-c-cCchhhh----hcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcC
Confidence 00 0 0 0111111 1123567888999999999999999999998864
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-39 Score=339.74 Aligned_cols=258 Identities=17% Similarity=0.312 Sum_probs=205.6
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC---------CChHHHHHHHHHHhcCC-CCCcceeeeeeee
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---------HSTRNFMHHIELISKLR-HRHLVSALGHCFE 544 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---------~~~~~f~~E~~~l~~l~-H~NIv~l~g~~~~ 544 (786)
.++|+..+.||+|+||.||+|+.+ +|+.||||+++.... ...+.+.+|++++++++ ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 467888999999999999999975 689999999975431 11356889999999996 9999999998864
Q ss_pred ccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCc
Q 003926 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV 624 (786)
Q Consensus 545 ~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~ 624 (786)
.+..++||||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.
T Consensus 96 -------~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~ 162 (298)
T 1phk_A 96 -------NTFFFLVFDLMKKGELFDYLTEK---VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMN 162 (298)
T ss_dssp -------SSEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCC
T ss_pred -------CCeEEEEEeccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCc
Confidence 45789999999999999999753 3589999999999999999999997 9999999999999999999
Q ss_pred ccccCCCcccccccccccccccccccccCccccc------cCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHH
Q 003926 625 AKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSA------RGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQ 698 (786)
Q Consensus 625 ~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~------~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~ 698 (786)
+||+|||++.............++..|+|||.+. ...++.++||||||+++|||++|+.||...........+.
T Consensus 163 ~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~ 242 (298)
T 1phk_A 163 IKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIM 242 (298)
T ss_dssp EEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred EEEecccchhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHh
Confidence 9999999987655444444456778899999874 4568899999999999999999999997654433222211
Q ss_pred HHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 699 AVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 699 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
. .. .....+. .......+.+++.+||+.||++|||+.|+++|+||.+.
T Consensus 243 ~---~~----~~~~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 290 (298)
T 1phk_A 243 S---GN----YQFGSPE-----WDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQY 290 (298)
T ss_dssp H---TC----CCCCTTT-----GGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTT
T ss_pred c---CC----cccCccc-----ccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhc
Confidence 1 11 0000111 11122356788889999999999999999999987643
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-39 Score=335.08 Aligned_cols=256 Identities=19% Similarity=0.302 Sum_probs=201.5
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
.++|+..+.||+|+||.||+|+.. +++.||||+++.... ...+.+.+|++++++++||||+++++++.+ .+
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~ 78 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE-------GN 78 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-------TT
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEc-------CC
Confidence 356888899999999999999965 689999999975543 335679999999999999999999998875 45
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++||||+++|+|.+++... ..+++.....++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 152 (276)
T 2yex_A 79 IQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLA 152 (276)
T ss_dssp EEEEEEECCTTEEGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEEEecCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCc
Confidence 689999999999999998753 3589999999999999999999997 9999999999999999999999999998
Q ss_pred ccccccc---ccccccccccccCccccccCCC-CcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 634 LLAENAE---KVGHVIPYSGSIDPTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 634 ~~~~~~~---~~~~~~~~~~~~aPe~~~~~~~-t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
....... ......++..|+|||......+ +.++||||||+++|||++|+.||......... ........
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~--~~~~~~~~----- 225 (276)
T 2yex_A 153 TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE--YSDWKEKK----- 225 (276)
T ss_dssp EECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHH--HHHHHTTC-----
T ss_pred cccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHH--HHHhhhcc-----
Confidence 6543221 1233456778999999876664 77999999999999999999999754322110 01110000
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
....+ .. .....+.+++.+||+.||++|||+.|+++|+|+.+
T Consensus 226 ~~~~~--~~----~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~ 267 (276)
T 2yex_A 226 TYLNP--WK----KIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 267 (276)
T ss_dssp TTSTT--GG----GSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTC
T ss_pred cccCc--hh----hcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccC
Confidence 00000 01 11234667888999999999999999998887543
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-38 Score=339.38 Aligned_cols=264 Identities=17% Similarity=0.319 Sum_probs=195.8
Q ss_pred HHHhcCCCccCccCCCCCceeEEEEec----CCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeecc
Q 003926 473 EEATNNFDTSAFMGEGSQGQMYRGRLK----NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECY 546 (786)
Q Consensus 473 ~~~~~~f~~~~~iG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~ 546 (786)
....++|...+.||+|+||.||+|+.. ++..||||+++..... ..+.|.+|++++++++||||+++++++....
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 109 (313)
T 3brb_A 30 VIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMS 109 (313)
T ss_dssp BCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC--
T ss_pred ccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecc
Confidence 334567888899999999999999854 3558999999765432 2367999999999999999999999987522
Q ss_pred ccCCCCceEEEEEecCCCCChhHHhhcC---CCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC
Q 003926 547 FDDSSVSRIFLIFEYVPNGTLRSWISEG---HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL 623 (786)
Q Consensus 547 ~~~~~~~~~~LV~Ey~~~GsL~~~l~~~---~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~ 623 (786)
. ......++||||+++|+|.+++... .....+++..++.++.|+++||.|||+. +|+||||||+||+++.++
T Consensus 110 ~--~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~ 184 (313)
T 3brb_A 110 S--QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDM 184 (313)
T ss_dssp -------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTS
T ss_pred c--cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCC
Confidence 1 1123469999999999999998532 1234699999999999999999999997 999999999999999999
Q ss_pred cccccCCCcccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHH
Q 003926 624 VAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQA 699 (786)
Q Consensus 624 ~~kl~DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~ 699 (786)
.+||+|||++........ .....++..|+|||......++.++||||||+++|||++ |++||...........+.
T Consensus 185 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~- 263 (313)
T 3brb_A 185 TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLL- 263 (313)
T ss_dssp CEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH-
T ss_pred cEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHH-
Confidence 999999999865433211 122334567999999988889999999999999999999 889987654443322211
Q ss_pred HHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 700 VVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 700 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
... . +.....+ ...+.+++.+||+.||++|||+.|+++++...
T Consensus 264 --~~~----~----~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l 306 (313)
T 3brb_A 264 --HGH----R----LKQPEDC----LDELYEIMYSCWRTDPLDRPTFSVLRLQLEKL 306 (313)
T ss_dssp --TTC----C----CCCBTTC----CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred --cCC----C----CCCCccc----cHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 100 0 1111112 23567888899999999999999999999744
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-38 Score=353.05 Aligned_cols=265 Identities=18% Similarity=0.270 Sum_probs=185.8
Q ss_pred cCccCCCCCceeEEEEec---CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEEE
Q 003926 482 SAFMGEGSQGQMYRGRLK---NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLI 558 (786)
Q Consensus 482 ~~~iG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV 558 (786)
+++||+|+||+||+|+.+ +++.||||++.... ....+.+|++++++++|||||++++++... .....++|
T Consensus 26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-----~~~~~~lv 98 (405)
T 3rgf_A 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSH-----ADRKVWLL 98 (405)
T ss_dssp SCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEET-----TTTEEEEE
T ss_pred CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecC-----CCCeEEEE
Confidence 568999999999999965 57899999997543 346789999999999999999999998641 24578999
Q ss_pred EecCCCCChhHHhhcC------CCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceee----cCCCccccc
Q 003926 559 FEYVPNGTLRSWISEG------HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL----DQNLVAKIS 628 (786)
Q Consensus 559 ~Ey~~~GsL~~~l~~~------~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILl----d~~~~~kl~ 628 (786)
|||++ |+|.+++... .....+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+
T Consensus 99 ~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~ 174 (405)
T 3rgf_A 99 FDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIA 174 (405)
T ss_dssp EECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEEC
T ss_pred EeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEE
Confidence 99997 5888877521 1123589999999999999999999998 99999999999999 778999999
Q ss_pred CCCcccccccc----cccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCchh----------HHH
Q 003926 629 SYNLPLLAENA----EKVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRKEV----------DLL 693 (786)
Q Consensus 629 DfGl~~~~~~~----~~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~~~----------~~~ 693 (786)
|||+++..... .......++..|+|||.+... .++.++|||||||++|||+||++||..... +.+
T Consensus 175 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l 254 (405)
T 3rgf_A 175 DMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQL 254 (405)
T ss_dssp CTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHH
T ss_pred ECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHH
Confidence 99999765432 122334678889999988764 589999999999999999999999965332 222
Q ss_pred HHHHHHHHHhcccccccccc------------ccccccCcH---------HHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 003926 694 KNQLQAVVTADESARRSMVD------------PAVNKACLD---------ESLKTMMEVCVRCLLKNPAERPSVEDVLWN 752 (786)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~d------------~~~~~~~~~---------~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 752 (786)
...+..........+..+.. ......+.. .....+.+++.+||+.||++|||+.|+++|
T Consensus 255 ~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h 334 (405)
T 3rgf_A 255 DRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 334 (405)
T ss_dssp HHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 22222211111111111000 000000000 002356788999999999999999999999
Q ss_pred HHHHH
Q 003926 753 LQFAA 757 (786)
Q Consensus 753 l~~~~ 757 (786)
+||..
T Consensus 335 p~f~~ 339 (405)
T 3rgf_A 335 PYFLE 339 (405)
T ss_dssp GGGTS
T ss_pred hhhcc
Confidence 99865
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-39 Score=340.06 Aligned_cols=267 Identities=18% Similarity=0.317 Sum_probs=186.1
Q ss_pred HhcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
..++|...+.||+|+||.||+|+. .+++.||||++..... ...+++.+|++++++++||||+++++++.. .
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~ 85 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVV-------K 85 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEES-------S
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEee-------c
Confidence 356788999999999999999985 4689999999875542 335678999999999999999999998865 3
Q ss_pred ceEEEEEecCCCCChhHHhhcC-----CCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEG-----HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKI 627 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~-----~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl 627 (786)
+..++||||+++|+|.+++... .....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||
T Consensus 86 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl 162 (303)
T 2vwi_A 86 DELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQI 162 (303)
T ss_dssp SCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEE
T ss_pred CCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEE
Confidence 5689999999999999998631 1234589999999999999999999997 9999999999999999999999
Q ss_pred cCCCccccccccc------ccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHH
Q 003926 628 SSYNLPLLAENAE------KVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAV 700 (786)
Q Consensus 628 ~DfGl~~~~~~~~------~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~ 700 (786)
+|||++....... ......++..|+|||.... ..++.++||||||+++|||++|+.||........... .
T Consensus 163 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~---~ 239 (303)
T 2vwi_A 163 ADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLML---T 239 (303)
T ss_dssp CCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHH---H
T ss_pred EeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHH---H
Confidence 9999986543221 1123356778999998765 4689999999999999999999999976543322111 1
Q ss_pred HHhccccc-cccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 701 VTADESAR-RSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 701 ~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
........ ....++......+ ..+.+++.+||+.||++|||+.|+++|+||.+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 294 (303)
T 2vwi_A 240 LQNDPPSLETGVQDKEMLKKYG----KSFRKMISLCLQKDPEKRPTAAELLRHKFFQKA 294 (303)
T ss_dssp HTSSCCCTTC-----CCCCCCC----HHHHHHHHHHCCSSGGGSCCHHHHHTSTTC---
T ss_pred hccCCCccccccccchhhhhhh----HHHHHHHHHHccCChhhCcCHHHHhhChhhhcC
Confidence 11110000 0111111112222 356678889999999999999999999987653
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-38 Score=338.60 Aligned_cols=267 Identities=21% Similarity=0.335 Sum_probs=199.0
Q ss_pred HhcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcC--CCCCcceeeeeeeeccccCCCC
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKL--RHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l--~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
..++|+..+.||+|+||.||+|+.. |+.||||++... ....+.+|.+++... +||||+++++++.... ...
T Consensus 35 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~---~~~ 107 (337)
T 3mdy_A 35 IAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGT---GSW 107 (337)
T ss_dssp HHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC---GGG
T ss_pred cccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCC---CCC
Confidence 3467999999999999999999976 899999998643 245566777777665 9999999999987521 112
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCC-----CCCccccCCCCCceeecCCCcccc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI-----VPGVFSNNLKITDILLDQNLVAKI 627 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~-----~~~ivHrdlk~~NILld~~~~~kl 627 (786)
...++||||+++|+|.+++... .+++..++.++.|++.||+|||+.+ .++|+||||||+|||++.++.+||
T Consensus 108 ~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl 183 (337)
T 3mdy_A 108 TQLYLITDYHENGSLYDYLKST----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCI 183 (337)
T ss_dssp CEEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEE
T ss_pred CceEEEEeccCCCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEE
Confidence 5789999999999999999753 5899999999999999999999852 348999999999999999999999
Q ss_pred cCCCccccccccccc-----ccccccccccCccccccCCCCcc------cceeehhHHHHHHHhC----------CCCCC
Q 003926 628 SSYNLPLLAENAEKV-----GHVIPYSGSIDPTNSARGKLEEK------IDIYDFGLILLEIIVG----------RPLKS 686 (786)
Q Consensus 628 ~DfGl~~~~~~~~~~-----~~~~~~~~~~aPe~~~~~~~t~k------sDVwSfGvvl~ElltG----------~~p~~ 686 (786)
+|||+++........ ....++..|+|||.+....++.+ +|||||||++|||+|| +.|+.
T Consensus 184 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~ 263 (337)
T 3mdy_A 184 ADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYH 263 (337)
T ss_dssp CCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred EeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHh
Confidence 999998654322211 23457788999999877666655 9999999999999999 55654
Q ss_pred Cchh-HHHHHHHHHHHHhcccccccccccccccc-CcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 687 RKEV-DLLKNQLQAVVTADESARRSMVDPAVNKA-CLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 687 ~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
.... .............. ...+..... ...+....+.+++.+||+.||++|||+.||+++|.....
T Consensus 264 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 331 (337)
T 3mdy_A 264 DLVPSDPSYEDMREIVCIK------KLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSE 331 (337)
T ss_dssp TTSCSSCCHHHHHHHHTTS------CCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhcCCCCchhhhHHHHhhh------ccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHh
Confidence 3211 00001111111110 111111111 123556678899999999999999999999999975543
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-38 Score=334.67 Aligned_cols=251 Identities=17% Similarity=0.274 Sum_probs=199.2
Q ss_pred CCCccC-ccCCCCCceeEEEEec---CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 478 NFDTSA-FMGEGSQGQMYRGRLK---NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 478 ~f~~~~-~iG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
+|...+ .||+|+||.||+|+.. ++..||||+++.... ...+.+.+|++++++++||||+++++++..
T Consensus 10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------- 81 (287)
T 1u59_A 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-------- 81 (287)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES--------
T ss_pred HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecC--------
Confidence 344444 8999999999999853 578899999986532 235679999999999999999999998842
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..++||||+++|+|.+++... ...+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 82 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~ 156 (287)
T 1u59_A 82 EALMLVMEMAGGGPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGL 156 (287)
T ss_dssp SSEEEEEECCTTEEHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTT
T ss_pred CCcEEEEEeCCCCCHHHHHHhC--CccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccc
Confidence 3589999999999999999753 24689999999999999999999997 999999999999999999999999999
Q ss_pred ccccccccc----cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccc
Q 003926 633 PLLAENAEK----VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESA 707 (786)
Q Consensus 633 ~~~~~~~~~----~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (786)
+........ .....++..|+|||......++.++||||||+++|||+| |+.||...........+.. ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~---~~--- 230 (287)
T 1u59_A 157 SKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ---GK--- 230 (287)
T ss_dssp CEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHT---TC---
T ss_pred eeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhc---CC---
Confidence 865532221 112234567999999888889999999999999999999 9999976554333222211 00
Q ss_pred ccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 708 RRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 708 ~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
. +.....+ ...+.+++.+||+.||++||++.|++++++..
T Consensus 231 -~----~~~~~~~----~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 270 (287)
T 1u59_A 231 -R----MECPPEC----PPELYALMSDCWIYKWEDRPDFLTVEQRMRAC 270 (287)
T ss_dssp -C----CCCCTTC----CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred -c----CCCCCCc----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 0 1111122 23567888899999999999999999999744
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-39 Score=338.17 Aligned_cols=252 Identities=17% Similarity=0.239 Sum_probs=197.6
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC--ChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~~ 551 (786)
.++|+..+.||+|+||.||+|+.. +++.||||+++..... ...++.+|+..+.++ +||||+++++++.+
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~------- 82 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAE------- 82 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEE-------
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeec-------
Confidence 466888999999999999999975 7999999999865332 346789999999999 99999999999875
Q ss_pred CceEEEEEecCCCCChhHHhhcCC-CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC---------
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGH-AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ--------- 621 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~--------- 621 (786)
.+..++||||+++|+|.+++.... ....+++..+..++.|+++||+|||+. +|+||||||+||+++.
T Consensus 83 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~ 159 (289)
T 1x8b_A 83 DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASE 159 (289)
T ss_dssp TTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC----------
T ss_pred CCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccc
Confidence 457899999999999999997531 114589999999999999999999997 9999999999999984
Q ss_pred ----------CCcccccCCCcccccccccccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCchh
Q 003926 622 ----------NLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRKEV 690 (786)
Q Consensus 622 ----------~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~~~ 690 (786)
...+||+|||.+....... ...++..|+|||.+... .++.++|||||||++|||++|++++.....
T Consensus 160 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~ 236 (289)
T 1x8b_A 160 EGDEDDWASNKVMFKIGDLGHVTRISSPQ---VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ 236 (289)
T ss_dssp ----------CCCEEECCCTTCEETTCSC---CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH
T ss_pred ccccccccCCceEEEEcccccccccCCcc---ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH
Confidence 4478999999986554322 23467889999988665 567899999999999999999987654322
Q ss_pred HHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 691 DLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
. .. .... .. +.....++ ..+.+++.+||+.||++|||+.|+++|+|+...
T Consensus 237 ~--~~----~~~~---~~-----~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 286 (289)
T 1x8b_A 237 W--HE----IRQG---RL-----PRIPQVLS----QEFTELLKVMIHPDPERRPSAMALVKHSVLLSA 286 (289)
T ss_dssp H--HH----HHTT---CC-----CCCSSCCC----HHHHHHHHHHTCSSGGGSCCHHHHHTCTTC---
T ss_pred H--HH----HHcC---CC-----CCCCcccC----HHHHHHHHHHhCCCcccCCCHHHHhhChHhhhh
Confidence 1 11 1110 01 11111222 356678889999999999999999999987653
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-38 Score=340.54 Aligned_cols=266 Identities=21% Similarity=0.339 Sum_probs=206.6
Q ss_pred CHHHHHHHhcCCCccCccCCCCCceeEEEEe------cCCcEEEEEEecccCCC-ChHHHHHHHHHHhcC-CCCCcceee
Q 003926 468 SLEELEEATNNFDTSAFMGEGSQGQMYRGRL------KNGTFVAIRCLKMKKCH-STRNFMHHIELISKL-RHRHLVSAL 539 (786)
Q Consensus 468 ~~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l-~H~NIv~l~ 539 (786)
...++....++|...+.||+|+||.||+|+. .+++.||||+++..... ..+.+.+|+++++++ +||||++++
T Consensus 18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 97 (316)
T 2xir_A 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 97 (316)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence 3445555567899999999999999999984 24689999999765432 245799999999999 799999999
Q ss_pred eeeeeccccCCCCceEEEEEecCCCCChhHHhhcCCC-------------CCCCCHHHHHHHHHHHHHHhhhhhcCCCCC
Q 003926 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHA-------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPG 606 (786)
Q Consensus 540 g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ 606 (786)
+++... ....++||||+++|+|.+++..... ...+++..+..++.|+++||.|||+. +
T Consensus 98 ~~~~~~------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ 168 (316)
T 2xir_A 98 GACTKP------GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---K 168 (316)
T ss_dssp EEECCT------TSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred EEEecC------CCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---C
Confidence 988641 3458999999999999999986432 12388999999999999999999997 9
Q ss_pred ccccCCCCCceeecCCCcccccCCCcccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CC
Q 003926 607 VFSNNLKITDILLDQNLVAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GR 682 (786)
Q Consensus 607 ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~ 682 (786)
|+||||||+||+++.++.+||+|||+++....... .....++..|+|||.+....++.++|||||||++|||+| |+
T Consensus 169 i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~ 248 (316)
T 2xir_A 169 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA 248 (316)
T ss_dssp CCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred cccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999865432221 123345667999999988889999999999999999998 99
Q ss_pred CCCCCchhH-HHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 683 PLKSRKEVD-LLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 683 ~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.||...... .....+. ... . +...... ...+.+++.+||+.||++|||+.||++++....
T Consensus 249 ~p~~~~~~~~~~~~~~~---~~~---~-----~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 309 (316)
T 2xir_A 249 SPYPGVKIDEEFCRRLK---EGT---R-----MRAPDYT----TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309 (316)
T ss_dssp CSSTTCCCSHHHHHHHH---HTC---C-----CCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCcccchhHHHHHHhc---cCc---c-----CCCCCCC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 998764322 2211111 110 0 0111111 235677888999999999999999999997543
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-38 Score=343.41 Aligned_cols=261 Identities=11% Similarity=0.088 Sum_probs=193.3
Q ss_pred cCCCccCccCCCCCceeEEEEec----CCcEEEEEEecccCCC-----------ChHHHHHHHHHHhcCCCCCcceeeee
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK----NGTFVAIRCLKMKKCH-----------STRNFMHHIELISKLRHRHLVSALGH 541 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~~-----------~~~~f~~E~~~l~~l~H~NIv~l~g~ 541 (786)
++|...+.||+|+||.||+|+.. ++..||||++...... ..+.+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 56888899999999999999975 5789999998754321 12357789999999999999999999
Q ss_pred eeeccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC
Q 003926 542 CFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ 621 (786)
Q Consensus 542 ~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~ 621 (786)
+.... ......++||||+ +|+|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.
T Consensus 117 ~~~~~---~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~ 186 (345)
T 2v62_A 117 GLTEF---KGRSYRFMVMERL-GIDLQKISGQNG---TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGY 186 (345)
T ss_dssp EEEES---SSCEEEEEEEECE-EEEHHHHCBGGG---BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEES
T ss_pred ccccc---CCCcEEEEEEecc-CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEcc
Confidence 87522 2245789999999 999999997532 689999999999999999999997 9999999999999998
Q ss_pred CC--cccccCCCcccccccccc--------cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCch--
Q 003926 622 NL--VAKISSYNLPLLAENAEK--------VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKE-- 689 (786)
Q Consensus 622 ~~--~~kl~DfGl~~~~~~~~~--------~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~-- 689 (786)
++ .+||+|||+++....... .....++..|+|||......++.++|||||||++|||+||+.||....
T Consensus 187 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~ 266 (345)
T 2v62_A 187 KNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKD 266 (345)
T ss_dssp SSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTC
T ss_pred CCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccc
Confidence 87 999999999965532211 123457788999999988889999999999999999999999995422
Q ss_pred hHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 690 VDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
................ ......... ......+.+++.+||+.||++||++.||++.++
T Consensus 267 ~~~~~~~~~~~~~~~~----~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 324 (345)
T 2v62_A 267 PVAVQTAKTNLLDELP----QSVLKWAPS---GSSCCEIAQFLVCAHSLAYDEKPNYQALKKILN 324 (345)
T ss_dssp HHHHHHHHHHHHHTTT----HHHHHHSCT---TSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHC
T ss_pred cHHHHHHHHhhccccc----HHHHhhccc---cccHHHHHHHHHHHhhcCcccCCCHHHHHHHHh
Confidence 1111111111111110 000000000 012235678888999999999999999999885
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-39 Score=348.06 Aligned_cols=269 Identities=17% Similarity=0.233 Sum_probs=204.6
Q ss_pred hcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCCh-----------------HHHHHHHHHHhcCCCCCccee
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHST-----------------RNFMHHIELISKLRHRHLVSA 538 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~-----------------~~f~~E~~~l~~l~H~NIv~l 538 (786)
.++|...+.||+|+||.||+|+. +|+.||||++........ +.|.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 45788899999999999999999 899999999975432211 789999999999999999999
Q ss_pred eeeeeeccccCCCCceEEEEEecCCCCChhHH------hhcCCCCCCCCHHHHHHHHHHHHHHhhhhhc-CCCCCccccC
Q 003926 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSW------ISEGHAHQSLTWTQRISAAIGVAKGIQFLHT-GIVPGVFSNN 611 (786)
Q Consensus 539 ~g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~------l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~-~~~~~ivHrd 611 (786)
++++.. .+..++||||+++|+|.++ +... ....+++..+..++.|++.||.|||+ . +|+|||
T Consensus 109 ~~~~~~-------~~~~~lv~e~~~~~~L~~~~~~~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~d 177 (348)
T 2pml_X 109 EGIITN-------YDEVYIIYEYMENDSILKFDEYFFVLDKN-YTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRD 177 (348)
T ss_dssp SEEEES-------SSEEEEEEECCTTCBSSEESSSEESSCSS-SCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCC
T ss_pred EEEEee-------CCeEEEEEeccCCCcHHHHHHHhhhhhhc-cccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecC
Confidence 999875 4578999999999999999 5432 13579999999999999999999998 6 999999
Q ss_pred CCCCceeecCCCcccccCCCcccccccccccccccccccccCccccccC-CCCc-ccceeehhHHHHHHHhCCCCCCCch
Q 003926 612 LKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARG-KLEE-KIDIYDFGLILLEIIVGRPLKSRKE 689 (786)
Q Consensus 612 lk~~NILld~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~-~~t~-ksDVwSfGvvl~ElltG~~p~~~~~ 689 (786)
|||+||+++.++.+||+|||++...... ......++..|+|||..... .++. ++||||||+++|||++|++||....
T Consensus 178 l~p~Nil~~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 256 (348)
T 2pml_X 178 VKPSNILMDKNGRVKLSDFGESEYMVDK-KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKI 256 (348)
T ss_dssp CCGGGEEECTTSCEEECCCTTCEECBTT-EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CChHhEEEcCCCcEEEeccccccccccc-cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999999999999999999998655332 23344577889999998776 5666 9999999999999999999997644
Q ss_pred h-HHHHHHHHHHHHhcccccccccccccc---ccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 690 V-DLLKNQLQAVVTADESARRSMVDPAVN---KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 690 ~-~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
. ......+................+... ..........+.+++.+||+.||.+|||+.|+++|+||..
T Consensus 257 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~ 328 (348)
T 2pml_X 257 SLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLAD 328 (348)
T ss_dssp CSHHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTT
T ss_pred cHHHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccC
Confidence 3 222221110000000000000000000 0000122345678889999999999999999999998765
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-38 Score=341.10 Aligned_cols=273 Identities=16% Similarity=0.265 Sum_probs=196.6
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccc-------c
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYF-------D 548 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~-------~ 548 (786)
++|...+.||+|+||.||+|+.. +|+.||||++........+.+.+|++++++++||||+++++++..... .
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 46778899999999999999976 589999999876554445789999999999999999999998743210 0
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeec-CCCcccc
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD-QNLVAKI 627 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld-~~~~~kl 627 (786)
.......++||||++ |+|.+++.. ..+++.....++.|+++||+|||+. +|+||||||+||+++ +++.+||
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl 162 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLEQ----GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKI 162 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEE
T ss_pred ccccCceeEEeeccC-CCHHHHhhc----CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEE
Confidence 012457899999998 699999964 3588999999999999999999997 999999999999997 5679999
Q ss_pred cCCCccccccccc----ccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHH
Q 003926 628 SSYNLPLLAENAE----KVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVT 702 (786)
Q Consensus 628 ~DfGl~~~~~~~~----~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~ 702 (786)
+|||+++...... ......++..|+|||.... ..++.++|||||||++|||+||+.||...........+.....
T Consensus 163 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~ 242 (320)
T 2i6l_A 163 GDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIP 242 (320)
T ss_dssp CCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSC
T ss_pred ccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcC
Confidence 9999987553221 1223345678999998755 6789999999999999999999999976543322221111100
Q ss_pred hc-cccccc------------ccccccc-ccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 703 AD-ESARRS------------MVDPAVN-KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 703 ~~-~~~~~~------------~~d~~~~-~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.. .....+ ...+... ..........+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 311 (320)
T 2i6l_A 243 VVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSI 311 (320)
T ss_dssp CCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHT
T ss_pred CCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCccccc
Confidence 00 000000 0000000 0000112345778889999999999999999999999874
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-38 Score=331.69 Aligned_cols=257 Identities=18% Similarity=0.266 Sum_probs=204.5
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.++|+..+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|++++++++||||+++++++.. .
T Consensus 21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~ 93 (287)
T 2wei_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED-------S 93 (287)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-------S
T ss_pred hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeC-------C
Confidence 356888999999999999999975 689999999875432 346789999999999999999999999865 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCC---CcccccC
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN---LVAKISS 629 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~---~~~kl~D 629 (786)
+..++||||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.+ +.+||+|
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~D 167 (287)
T 2wei_A 94 SSFYIVGELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIID 167 (287)
T ss_dssp SEEEEEECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECS
T ss_pred CeEEEEEEccCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEec
Confidence 5689999999999999988753 3589999999999999999999997 99999999999999764 4699999
Q ss_pred CCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 630 YNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 630 fGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
||++.............++..|+|||.... .++.++||||||+++|||++|++||...........+.. .. .
T Consensus 168 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~---~~---~- 239 (287)
T 2wei_A 168 FGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVET---GK---Y- 239 (287)
T ss_dssp TTGGGTBCCCSSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---CC---C-
T ss_pred cCcceeecCCCccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHc---CC---C-
Confidence 999876544333334456778999998754 589999999999999999999999976554433222211 10 0
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
. .+....... ...+.+++.+||+.||++|||+.|+++|+|+.+.
T Consensus 240 ~-~~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 283 (287)
T 2wei_A 240 A-FDLPQWRTI----SDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283 (287)
T ss_dssp C-CCSGGGTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHH
T ss_pred C-CCchhhhhc----CHHHHHHHHHHcccChhhCcCHHHHhcCHHHhcc
Confidence 0 000000111 2356788889999999999999999999998764
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-38 Score=347.29 Aligned_cols=273 Identities=16% Similarity=0.258 Sum_probs=205.2
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
.++|...+.||+|+||.||+|+.. +++.||||++...... ..+.+.+|++++++++||||+++++++..... ....
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~~~~ 103 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTI--EQMK 103 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSST--TTCC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCc--cccc
Confidence 356888999999999999999864 6889999999754322 23679999999999999999999998865321 1234
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++||||++ |+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 104 ~~~iv~e~~~-~~L~~~l~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a 175 (364)
T 3qyz_A 104 DVYIVQDLME-TDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLA 175 (364)
T ss_dssp CEEEEEECCS-EEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEcccC-cCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcce
Confidence 6899999998 5999999753 589999999999999999999998 9999999999999999999999999998
Q ss_pred cccccccc----cccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhc-ccc
Q 003926 634 LLAENAEK----VGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD-ESA 707 (786)
Q Consensus 634 ~~~~~~~~----~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~-~~~ 707 (786)
........ .....++..|+|||.+.. ..++.++|||||||++|||++|++||...........+....... ...
T Consensus 176 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 255 (364)
T 3qyz_A 176 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 255 (364)
T ss_dssp EECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHH
T ss_pred EecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence 75543221 123467888999998654 458999999999999999999999997654433322222111110 000
Q ss_pred cccc------------cccc-c-cccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 708 RRSM------------VDPA-V-NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 708 ~~~~------------~d~~-~-~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
.... ..+. . ...........+.+++.+||+.||++|||+.|+++|+|+.+.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 320 (364)
T 3qyz_A 256 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 320 (364)
T ss_dssp HHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTT
T ss_pred HHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhc
Confidence 0000 0000 0 000001122457788999999999999999999999998754
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-38 Score=333.80 Aligned_cols=264 Identities=15% Similarity=0.254 Sum_probs=193.3
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCC---ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCH---STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~---~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|...+.||+|+||.||+|+. .+|+.||||+++..... ..+.+.+|++++++++||||+++++++.. .
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------~ 104 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE-------D 104 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-------T
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc-------C
Confidence 4688899999999999999996 47999999999764332 24578999999999999999999999875 4
Q ss_pred ceEEEEEecCCCCChhHHhhcC-CCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 553 SRIFLIFEYVPNGTLRSWISEG-HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
+..++||||+++|+|.+++... .....+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||
T Consensus 105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg 181 (310)
T 2wqm_A 105 NELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLG 181 (310)
T ss_dssp TEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC-
T ss_pred CcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEecc
Confidence 5689999999999999998642 1234689999999999999999999997 99999999999999999999999999
Q ss_pred ccccccccc-ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 632 LPLLAENAE-KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 632 l~~~~~~~~-~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
++....... ......++..|+|||......++.++||||||+++|||++|+.||....... .......... ....
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~---~~~~ 257 (310)
T 2wqm_A 182 LGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL-YSLCKKIEQC---DYPP 257 (310)
T ss_dssp -----------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCH-HHHHHHHHTT---CSCC
T ss_pred ceeeecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhH-HHHHHHhhcc---cCCC
Confidence 986543322 1223456778999999988889999999999999999999999986532211 1111111110 0111
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhhhhhcc
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWHS 765 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~~~~~~ 765 (786)
. ....+ ...+.+++.+||+.||++|||+.||++++. ++++.+.+
T Consensus 258 ~----~~~~~----~~~l~~li~~~l~~dp~~Rps~~~il~~l~---~l~~~~~~ 301 (310)
T 2wqm_A 258 L----PSDHY----SEELRQLVNMCINPDPEKRPDVTYVYDVAK---RMHACTAS 301 (310)
T ss_dssp C----CTTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH---HHHHHHC-
T ss_pred C----ccccc----CHHHHHHHHHHcCCChhhCCCHHHHHHHHH---HHHHhhhh
Confidence 0 01111 235667888999999999999999999886 34444443
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-38 Score=334.65 Aligned_cols=254 Identities=20% Similarity=0.358 Sum_probs=201.5
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccC-----
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDD----- 549 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~----- 549 (786)
..+|+..+.||+|+||.||+|+.. +|+.||||+++... +.+.+|++++++++||||+++++++....+..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 85 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK 85 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence 346888899999999999999975 79999999987543 45789999999999999999999875421110
Q ss_pred ----CCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcc
Q 003926 550 ----SSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVA 625 (786)
Q Consensus 550 ----~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~ 625 (786)
......++||||+++|+|.+++.... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~ 161 (284)
T 2a19_B 86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQV 161 (284)
T ss_dssp ---CCEEEEEEEEECCCCSCBHHHHHHHGG-GSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEE
T ss_pred cccccCcceEEEEEeccCCCCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCCE
Confidence 11345799999999999999997532 24689999999999999999999997 99999999999999999999
Q ss_pred cccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcc
Q 003926 626 KISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADE 705 (786)
Q Consensus 626 kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 705 (786)
||+|||++.............++..|+|||......++.++||||||+++|||++|..|+.... ...... ..
T Consensus 162 kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-----~~~~~~-~~-- 233 (284)
T 2a19_B 162 KIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS-----KFFTDL-RD-- 233 (284)
T ss_dssp EECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH-----HHHHHH-HT--
T ss_pred EECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH-----HHHHHh-hc--
Confidence 9999999876544433344557788999999988889999999999999999999998764211 111110 00
Q ss_pred ccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 706 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.... ...+ ..+.+++.+||+.||++|||+.|++++++..+
T Consensus 234 ----~~~~----~~~~----~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~ 273 (284)
T 2a19_B 234 ----GIIS----DIFD----KKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK 273 (284)
T ss_dssp ----TCCC----TTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHT
T ss_pred ----cccc----ccCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 0011 1111 24567888999999999999999999998654
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-38 Score=334.25 Aligned_cols=253 Identities=14% Similarity=0.252 Sum_probs=193.9
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCC---hHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHS---TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~---~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
.++|...+.||+|+||.||+|+.. +++.||||++....... .+.|.+|++++++++||||+++++++..
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~------- 105 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEI------- 105 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-------
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEee-------
Confidence 467889999999999999999965 68999999997654322 3678999999999999999999999875
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
.+..++||||+++|+|.+++... ..+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||
T Consensus 106 ~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg 179 (309)
T 2h34_A 106 DGQLYVDMRLINGVDLAAMLRRQ---GPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFG 179 (309)
T ss_dssp TTEEEEEEECCCCEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCC
T ss_pred CCeEEEEEEecCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCc
Confidence 45689999999999999999753 3589999999999999999999997 99999999999999999999999999
Q ss_pred ccccccccc--ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 632 LPLLAENAE--KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 632 l~~~~~~~~--~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
++....... ......++..|+|||......++.++||||||+++|||++|+.||...........+ .... ...
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~----~~~~-~~~ 254 (309)
T 2h34_A 180 IASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHI----NQAI-PRP 254 (309)
T ss_dssp C----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHH----HSCC-CCG
T ss_pred cCccccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHh----ccCC-CCc
Confidence 986553321 122345677899999998888999999999999999999999999876543222111 1110 000
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCC-CHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERP-SVEDVLWNLQ 754 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-t~~evl~~l~ 754 (786)
. .....+ ...+.+++.+||+.||++|| +++++++.++
T Consensus 255 ~----~~~~~~----~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~ 292 (309)
T 2h34_A 255 S----TVRPGI----PVAFDAVIARGMAKNPEDRYVTCGDLSAAAH 292 (309)
T ss_dssp G----GTSTTC----CTHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred c----ccCCCC----CHHHHHHHHHhccCCHHHHHHhHHHHHHHHH
Confidence 0 111111 23466788899999999999 9999998886
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=344.18 Aligned_cols=259 Identities=21% Similarity=0.318 Sum_probs=201.7
Q ss_pred HHhcCCCccCccCCCCCceeEEEEec-CC-----cEEEEEEecccCC-CChHHHHHHHHHHhcC-CCCCcceeeeeeeec
Q 003926 474 EATNNFDTSAFMGEGSQGQMYRGRLK-NG-----TFVAIRCLKMKKC-HSTRNFMHHIELISKL-RHRHLVSALGHCFEC 545 (786)
Q Consensus 474 ~~~~~f~~~~~iG~G~fg~Vy~~~~~-~g-----~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~ 545 (786)
...++|...+.||+|+||.||+|+.. ++ ..||||.++.... ...+.+.+|+++++++ +||||++++++|..
T Consensus 43 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~- 121 (333)
T 2i1m_A 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH- 121 (333)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred CCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec-
Confidence 34577888999999999999999964 23 4899999976543 2346799999999999 89999999999864
Q ss_pred cccCCCCceEEEEEecCCCCChhHHhhcCC-----------CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCC
Q 003926 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGH-----------AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKI 614 (786)
Q Consensus 546 ~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~-----------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~ 614 (786)
.+..++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+. +|+||||||
T Consensus 122 ------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp 192 (333)
T 2i1m_A 122 ------GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAA 192 (333)
T ss_dssp ------SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSG
T ss_pred ------CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCccc
Confidence 356899999999999999987421 123589999999999999999999997 999999999
Q ss_pred CceeecCCCcccccCCCcccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchh
Q 003926 615 TDILLDQNLVAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEV 690 (786)
Q Consensus 615 ~NILld~~~~~kl~DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~ 690 (786)
+||+++.++.+||+|||++........ .....++..|+|||......++.++|||||||++|||+| |++||.....
T Consensus 193 ~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 272 (333)
T 2i1m_A 193 RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV 272 (333)
T ss_dssp GGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCS
T ss_pred ceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccch
Confidence 999999999999999999865432221 122334567999999888889999999999999999999 9999876432
Q ss_pred H-HHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 691 D-LLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 691 ~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
. .....+.. . . . +.....+ ...+.+++.+||+.||++|||+.||+++++...
T Consensus 273 ~~~~~~~~~~----~---~-~---~~~~~~~----~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 325 (333)
T 2i1m_A 273 NSKFYKLVKD----G---Y-Q---MAQPAFA----PKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 325 (333)
T ss_dssp SHHHHHHHHH----T---C-C---CCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hHHHHHHHhc----C---C-C---CCCCCCC----CHHHHHHHHHHhccChhhCcCHHHHHHHHHHHH
Confidence 2 12111111 1 0 0 0011111 235677888999999999999999999997543
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=334.10 Aligned_cols=252 Identities=21% Similarity=0.381 Sum_probs=195.5
Q ss_pred hcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
.++|+..+.||+|+||.||+|... |+.||||+++... ..+.|.+|++++++++||||+++++++.+. .+..
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------~~~~ 90 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEE------KGGL 90 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--------CC
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcC------CCce
Confidence 456788899999999999999875 8899999987543 457899999999999999999999987541 2457
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
++||||+++|+|.+++.... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~ 166 (278)
T 1byg_A 91 YIVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKE 166 (278)
T ss_dssp EEEECCCTTEEHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC---
T ss_pred EEEEecCCCCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccccc
Confidence 99999999999999997531 12378999999999999999999997 999999999999999999999999999865
Q ss_pred cccccccccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccccccccccc
Q 003926 636 AENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMVDP 714 (786)
Q Consensus 636 ~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 714 (786)
..... ....++..|+|||......++.++||||||+++|||+| |++||...........+. .. ..+
T Consensus 167 ~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~---~~--------~~~ 233 (278)
T 1byg_A 167 ASSTQ--DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE---KG--------YKM 233 (278)
T ss_dssp -----------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHT---TT--------CCC
T ss_pred ccccc--cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh---cC--------CCC
Confidence 43322 22245667999999988889999999999999999998 999997655443322211 00 011
Q ss_pred cccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 715 AVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 715 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.....+ ...+.+++.+||+.||++|||+.|+++.+....
T Consensus 234 ~~~~~~----~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~ 272 (278)
T 1byg_A 234 DAPDGC----PPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 272 (278)
T ss_dssp CCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCcccC----CHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHH
Confidence 111122 235667888999999999999999999987554
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=342.75 Aligned_cols=270 Identities=19% Similarity=0.331 Sum_probs=203.8
Q ss_pred CHHHHHHHhcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcC-CCCCcceeeeeeeec
Q 003926 468 SLEELEEATNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKL-RHRHLVSALGHCFEC 545 (786)
Q Consensus 468 ~~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~ 545 (786)
++.++....++|+..+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|+++++++ +||||+++++++...
T Consensus 15 ~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 93 (326)
T 2x7f_A 15 DLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKK 93 (326)
T ss_dssp -CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEEC
T ss_pred cchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeec
Confidence 3344445677899999999999999999996 478999999987543 3457899999999999 899999999998752
Q ss_pred cccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcc
Q 003926 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVA 625 (786)
Q Consensus 546 ~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~ 625 (786)
... ...+..++||||+++|+|.+++.... ...+++.....++.|++.||.|||+. +|+||||||+||+++.++.+
T Consensus 94 ~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~ 168 (326)
T 2x7f_A 94 NPP-GMDDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEV 168 (326)
T ss_dssp C---CCCCEEEEEEECCTTEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCE
T ss_pred cCc-cccceEEEEEEcCCCCcHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCE
Confidence 211 11357899999999999999997532 24689999999999999999999997 99999999999999999999
Q ss_pred cccCCCccccccccc-ccccccccccccCccccc-----cCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHH
Q 003926 626 KISSYNLPLLAENAE-KVGHVIPYSGSIDPTNSA-----RGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQA 699 (786)
Q Consensus 626 kl~DfGl~~~~~~~~-~~~~~~~~~~~~aPe~~~-----~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~ 699 (786)
||+|||++....... ......++..|+|||.+. ...++.++|||||||++|||++|++||...........+
T Consensus 169 kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-- 246 (326)
T 2x7f_A 169 KLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI-- 246 (326)
T ss_dssp EECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH--
T ss_pred EEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHh--
Confidence 999999986543221 223345678899999876 456899999999999999999999999765433221111
Q ss_pred HHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 700 VVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 700 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.... ...... ..++ ..+.+++.+||+.||++||++.|+++|+|+..
T Consensus 247 -~~~~---~~~~~~----~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~ 292 (326)
T 2x7f_A 247 -PRNP---APRLKS----KKWS----KKFQSFIESCLVKNHSQRPATEQLMKHPFIRD 292 (326)
T ss_dssp -HHSC---CCCCSC----SCSC----HHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHC
T ss_pred -hcCc---cccCCc----cccC----HHHHHHHHHHhccChhhCCCHHHHhhChHHhh
Confidence 1110 111111 1112 35667888999999999999999999999875
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-39 Score=354.65 Aligned_cols=268 Identities=7% Similarity=-0.025 Sum_probs=183.9
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC---ChHHHHHHH---HHHhcCCCCCcceeeeeee---ecc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH---STRNFMHHI---ELISKLRHRHLVSALGHCF---ECY 546 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~---~~~~f~~E~---~~l~~l~H~NIv~l~g~~~---~~~ 546 (786)
.+|...+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|+ ++++. +|||||+++..+. +..
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehhe
Confidence 44778899999999999999965 7999999999875432 235577784 55555 7999888553221 100
Q ss_pred ccCC--------------CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHH------HHHHHHHHHHhhhhhcCCCCC
Q 003926 547 FDDS--------------SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQR------ISAAIGVAKGIQFLHTGIVPG 606 (786)
Q Consensus 547 ~~~~--------------~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~------~~ia~~ia~gL~yLH~~~~~~ 606 (786)
.... .....|+|||||+ |+|.+++.... ..+.+..+ ..++.|+++||+|||+. +
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ 214 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD--FVYVFRGDEGILALHILTAQLIRLAANLQSK---G 214 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH--HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc--cccchhhhhhhhhHHHHHHHHHHHHHHHHHC---C
Confidence 0000 0145899999999 89999997531 13455556 78889999999999997 9
Q ss_pred ccccCCCCCceeecCCCcccccCCCcccccccccccccccccccccCcccccc--CCCCcccceeehhHHHHHHHhCCCC
Q 003926 607 VFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSAR--GKLEEKIDIYDFGLILLEIIVGRPL 684 (786)
Q Consensus 607 ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~--~~~t~ksDVwSfGvvl~ElltG~~p 684 (786)
|+||||||+|||++.++.+||+|||+++...... ....++..|+|||.+.. ..++.++|||||||++|||+||+.|
T Consensus 215 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~P 292 (371)
T 3q60_A 215 LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRG--PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLP 292 (371)
T ss_dssp EEETTCSGGGEEECTTSCEEECCGGGEEETTCEE--EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCS
T ss_pred CccCcCCHHHEEECCCCCEEEEecceeeecCCCc--cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999997554322 13344588999999876 6799999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 003926 685 KSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760 (786)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~ 760 (786)
|..........+ ........................+.+++.+||+.||++|||+.|+++|+||.+...
T Consensus 293 f~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 361 (371)
T 3q60_A 293 FGLVTPGIKGSW-------KRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQN 361 (371)
T ss_dssp TTBCCTTCTTCC-------CBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHHHH
T ss_pred CCCcCcccccch-------hhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHHHH
Confidence 976432110000 000000000000000001122345678888999999999999999999999987533
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-38 Score=345.05 Aligned_cols=271 Identities=15% Similarity=0.232 Sum_probs=200.1
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.++|...+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|+.++++++||||+++++++...... ...
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~~~ 119 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSL-RNF 119 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSS-TTC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCc-ccc
Confidence 356788899999999999999864 6999999999764332 246789999999999999999999998652110 111
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
...++||||++ |+|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~ 190 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMGM-----EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 190 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTC
T ss_pred eeEEEEEcccc-ccHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCc
Confidence 23499999998 689888743 489999999999999999999998 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccc-cc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESAR-RS 710 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~ 710 (786)
++..... .....++..|+|||.+.. ..++.++|||||||++|||++|++||...........+........... ..
T Consensus 191 a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 268 (371)
T 4exu_A 191 ARHADAE--MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQK 268 (371)
T ss_dssp C----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTT
T ss_pred ccccccC--cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHH
Confidence 8755332 233456788999998876 6799999999999999999999999987554332222211111100000 00
Q ss_pred ccc----------ccccc----cCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 711 MVD----------PAVNK----ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 711 ~~d----------~~~~~----~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
+.+ +.... .........+.+++.+||+.||++|||+.|+++|+||...
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~ 330 (371)
T 4exu_A 269 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF 330 (371)
T ss_dssp CSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred hhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccC
Confidence 000 00000 0001123467788999999999999999999999998653
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-38 Score=343.13 Aligned_cols=261 Identities=16% Similarity=0.199 Sum_probs=187.4
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCC-CCCcceeeeeeeecccc-CCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLR-HRHLVSALGHCFECYFD-DSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~NIv~l~g~~~~~~~~-~~~~ 552 (786)
..+|...+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.++++++ |||||++++++...... ....
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 346788899999999999999964 78999999986554444567999999999996 99999999998542221 1234
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCC--ccccCCCCCceeecCCCcccccCC
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPG--VFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~--ivHrdlk~~NILld~~~~~kl~Df 630 (786)
...++||||++ |+|.+++........+++..++.++.|++.||.|||+. + |+||||||+|||++.++.+||+||
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~Df 182 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCDF 182 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEecC
Confidence 56899999996 79999886532334699999999999999999999996 6 999999999999999999999999
Q ss_pred Cccccccccccc-------------ccccccccccCcccc---ccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHH
Q 003926 631 NLPLLAENAEKV-------------GHVIPYSGSIDPTNS---ARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLK 694 (786)
Q Consensus 631 Gl~~~~~~~~~~-------------~~~~~~~~~~aPe~~---~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~ 694 (786)
|+++........ ....++..|+|||.+ ....++.++|||||||++|||+||+.||........
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~- 261 (337)
T 3ll6_A 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRI- 261 (337)
T ss_dssp TTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------
T ss_pred ccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHh-
Confidence 998655332111 123467789999987 456789999999999999999999999965432111
Q ss_pred HHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 695 NQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
.... .. ... ....+ ..+.+++.+||+.||++|||+.|++++++....
T Consensus 262 --~~~~-------~~-~~~---~~~~~----~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~ 308 (337)
T 3ll6_A 262 --VNGK-------YS-IPP---HDTQY----TVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAA 308 (337)
T ss_dssp -------------CC-CCT---TCCSS----GGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --hcCc-------cc-CCc---ccccc----hHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 0000 00 000 01111 235578889999999999999999999986654
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-39 Score=349.18 Aligned_cols=270 Identities=16% Similarity=0.239 Sum_probs=187.4
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
++|...+.||+|+||.||+|+. .+|+.||||++...... ..+.+.+|++++++++||||+++++++...... ....
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~-~~~~ 107 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSL-EEFN 107 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSG-GGCC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCcc-ccCC
Confidence 5688889999999999999985 57999999998754322 346788999999999999999999988642110 1124
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..|+|+||+ +++|.+++.. ..+++..+..++.|+++||.|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a 179 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 179 (367)
T ss_dssp CCEEEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC----
T ss_pred eEEEEeccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeecccc
Confidence 579999999 6899998864 3589999999999999999999997 9999999999999999999999999998
Q ss_pred cccccccccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHH-HHHHHHHHHHhcccccccc
Q 003926 634 LLAENAEKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL-LKNQLQAVVTADESARRSM 711 (786)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 711 (786)
+..... .....++..|+|||.+.. ..++.++|||||||++|||++|++||...+... +.................+
T Consensus 180 ~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~ 257 (367)
T 2fst_X 180 RHTADE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 257 (367)
T ss_dssp -------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTC
T ss_pred cccccc--CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHh
Confidence 654322 233457788999998866 679999999999999999999999997655432 2222221111110000000
Q ss_pred ccc----------cccccC----cHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 712 VDP----------AVNKAC----LDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 712 ~d~----------~~~~~~----~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
... ...... .......+.+++.+||+.||++|||+.|+++|+||..
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~ 317 (367)
T 2fst_X 258 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317 (367)
T ss_dssp CCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred hhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhh
Confidence 000 000000 0011245678889999999999999999999999765
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-39 Score=344.05 Aligned_cols=260 Identities=19% Similarity=0.362 Sum_probs=200.6
Q ss_pred cCCCccCccCCCCCceeEEEEe-----cCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-----KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
++|+..+.||+|+||.||+|++ .+|+.||||++........+.|.+|++++++++||||+++++++... .
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~ 115 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA-----G 115 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC-------
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEec-----C
Confidence 4577889999999999999984 36899999999875544567899999999999999999999987642 1
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
....++||||+++|+|.+++.... ..+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 116 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg 190 (326)
T 2w1i_A 116 RRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFG 190 (326)
T ss_dssp --CCEEEECCCTTCBHHHHHHHST--TSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCT
T ss_pred CCceEEEEECCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCc
Confidence 345799999999999999998642 3589999999999999999999997 99999999999999999999999999
Q ss_pred cccccccccc----cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHH------------H
Q 003926 632 LPLLAENAEK----VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLK------------N 695 (786)
Q Consensus 632 l~~~~~~~~~----~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~------------~ 695 (786)
++........ .....++..|+|||......++.++||||||+++|||+||+.|+......... .
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (326)
T 2w1i_A 191 LTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 270 (326)
T ss_dssp TCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHH
T ss_pred chhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHH
Confidence 9876543221 11223445699999988888999999999999999999999887543211100 0
Q ss_pred HHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 696 QLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 696 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.+....... ..+.....+ ...+.+++.+||+.||++|||+.||++.+....
T Consensus 271 ~~~~~~~~~-------~~~~~~~~~----~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~ 321 (326)
T 2w1i_A 271 HLIELLKNN-------GRLPRPDGC----PDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 321 (326)
T ss_dssp HHHHHHHTT-------CCCCCCTTC----CHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHhhcC-------CCCCCCCcc----cHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 000000000 001111122 245678888999999999999999999987543
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-38 Score=331.82 Aligned_cols=256 Identities=12% Similarity=0.131 Sum_probs=200.8
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
.++|...+.||+|+||.||+|+. .+|+.||||++.... ..+++.+|++++++++|++++..++++.. ..+.
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~------~~~~ 79 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGA------EGDY 79 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEE------ETTE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccC------CCCc
Confidence 45788899999999999999996 579999999986543 34568999999999999998888877754 1456
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceee---cCCCcccccCCC
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL---DQNLVAKISSYN 631 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILl---d~~~~~kl~DfG 631 (786)
.++||||+ +|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||
T Consensus 80 ~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg 153 (296)
T 3uzp_A 80 NVMVMELL-GPSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFG 153 (296)
T ss_dssp EEEEEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCT
T ss_pred eEEEEEec-CCCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCC
Confidence 89999999 899999997432 3689999999999999999999998 99999999999999 588899999999
Q ss_pred cccccccccc--------cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchh----HHHHHHHHH
Q 003926 632 LPLLAENAEK--------VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEV----DLLKNQLQA 699 (786)
Q Consensus 632 l~~~~~~~~~--------~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~----~~~~~~~~~ 699 (786)
++........ .....++..|+|||......++.++|||||||++|||++|+.||..... .........
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 233 (296)
T 3uzp_A 154 LAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEK 233 (296)
T ss_dssp TCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHH
T ss_pred CcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhccc
Confidence 9865543221 1334577889999999888899999999999999999999999875321 111111111
Q ss_pred HHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 700 VVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 700 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
..... .+.....++ ..+.+++.+||+.||++|||+.||++.+....
T Consensus 234 ~~~~~--------~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 279 (296)
T 3uzp_A 234 KMSTP--------IEVLCKGYP----SEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 279 (296)
T ss_dssp HHHSC--------HHHHTTTSC----HHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred ccCCc--------hHHHHhhCC----HHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHH
Confidence 11110 000111122 35678888999999999999999999887443
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-38 Score=332.23 Aligned_cols=254 Identities=20% Similarity=0.360 Sum_probs=197.0
Q ss_pred cCCCccCccCCCCCceeEEEEecC----CcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKN----GTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~----g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
..|+..+.||+|+||.||+|+..+ +..||||.++.... ...+.|.+|++++++++||||++++++|.. .
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------~ 98 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR------S 98 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECC------S
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEc------C
Confidence 346778999999999999998642 34689999875433 234679999999999999999999998764 1
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
.+..++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 99 ~~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg 173 (298)
T 3f66_A 99 EGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFG 173 (298)
T ss_dssp SSCCEEEEECCTTCBHHHHHHCT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCG
T ss_pred CCceEEEEeCCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECccc
Confidence 34679999999999999999753 24589999999999999999999997 99999999999999999999999999
Q ss_pred cccccccccc-----cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcc
Q 003926 632 LPLLAENAEK-----VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADE 705 (786)
Q Consensus 632 l~~~~~~~~~-----~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 705 (786)
+++....... .....++..|+|||......++.++||||||+++|||++ |.+|+...........+. ...
T Consensus 174 ~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~---~~~- 249 (298)
T 3f66_A 174 LARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL---QGR- 249 (298)
T ss_dssp GGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHH---TTC-
T ss_pred ccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHh---cCC-
Confidence 9865533221 122334567999999988899999999999999999999 567776544333222111 100
Q ss_pred ccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 706 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
....+ ..++ ..+.+++.+||+.||++|||+.|+++.+...
T Consensus 250 ----~~~~~---~~~~----~~l~~li~~~l~~~p~~Rps~~ell~~L~~~ 289 (298)
T 3f66_A 250 ----RLLQP---EYCP----DPLYEVMLKCWHPKAEMRPSFSELVSRISAI 289 (298)
T ss_dssp ----CCCCC---TTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ----CCCCC---ccCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 00111 1122 3567888899999999999999999998743
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-38 Score=335.08 Aligned_cols=250 Identities=18% Similarity=0.287 Sum_probs=196.3
Q ss_pred hcCCCccC-ccCCCCCceeEEEEec---CCcEEEEEEecccCCCC--hHHHHHHHHHHhcCCCCCcceeeeeeeeccccC
Q 003926 476 TNNFDTSA-FMGEGSQGQMYRGRLK---NGTFVAIRCLKMKKCHS--TRNFMHHIELISKLRHRHLVSALGHCFECYFDD 549 (786)
Q Consensus 476 ~~~f~~~~-~iG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~~~~--~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~ 549 (786)
.++|...+ .||+|+||.||+|... +++.||||+++...... .++|.+|++++++++||||+++++++.
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~------ 88 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE------ 88 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE------
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEC------
Confidence 34566666 8999999999999642 47899999997654322 467999999999999999999999883
Q ss_pred CCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccC
Q 003926 550 SSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISS 629 (786)
Q Consensus 550 ~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 629 (786)
.+..++||||+++|+|.+++... ..+++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 89 --~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~D 160 (291)
T 1xbb_A 89 --AESWMLVMEMAELGPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISD 160 (291)
T ss_dssp --SSSEEEEEECCTTEEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECC
T ss_pred --CCCcEEEEEeCCCCCHHHHHHhC---cCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEcc
Confidence 24579999999999999999863 3589999999999999999999998 999999999999999999999999
Q ss_pred CCccccccccccc----ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhc
Q 003926 630 YNLPLLAENAEKV----GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTAD 704 (786)
Q Consensus 630 fGl~~~~~~~~~~----~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 704 (786)
||++......... ....++..|+|||......++.++||||||+++|||+| |+.||.......+...+.. .
T Consensus 161 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~----~ 236 (291)
T 1xbb_A 161 FGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK----G 236 (291)
T ss_dssp CTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT----T
T ss_pred CCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc----C
Confidence 9998655332211 11233467999999888889999999999999999999 9999987654433322211 1
Q ss_pred cccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 705 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
. .+.....+ ...+.+++.+||+.||++||++.||++.+.
T Consensus 237 --~-----~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 275 (291)
T 1xbb_A 237 --E-----RMGCPAGC----PREMYDLMNLCWTYDVENRPGFAAVELRLR 275 (291)
T ss_dssp --C-----CCCCCTTC----CHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred --C-----CCCCCCCC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 0 01111122 235678888999999999999999998886
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-38 Score=332.41 Aligned_cols=257 Identities=12% Similarity=0.125 Sum_probs=197.6
Q ss_pred HhcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
..++|+..+.||+|+||.||+|+. .+++.||||++..... .+++.+|++++++++|++++..+++|.. ..+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~------~~~ 78 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGA------EGD 78 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEE------ETT
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecC------CCC
Confidence 346799999999999999999995 5789999998765432 3458899999999999999988887754 145
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceee---cCCCcccccCC
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL---DQNLVAKISSY 630 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILl---d~~~~~kl~Df 630 (786)
..++||||+ +|+|.+++.... ..+++..+..++.|++.||.|||+. +|+||||||+||++ +.++.+||+||
T Consensus 79 ~~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Df 152 (296)
T 4hgt_A 79 YNVMVMELL-GPSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDF 152 (296)
T ss_dssp EEEEEEECC-CCBHHHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCC
T ss_pred ceEEEEEcc-CCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecC
Confidence 689999999 999999997532 3589999999999999999999998 99999999999999 78899999999
Q ss_pred Ccccccccccc--------cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhH----HHHHHHH
Q 003926 631 NLPLLAENAEK--------VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVD----LLKNQLQ 698 (786)
Q Consensus 631 Gl~~~~~~~~~--------~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~----~~~~~~~ 698 (786)
|+++....... .....++..|+|||......++.++|||||||++|||++|+.||...... .......
T Consensus 153 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 232 (296)
T 4hgt_A 153 GLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISE 232 (296)
T ss_dssp TTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHH
T ss_pred ccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhc
Confidence 99865543221 12345778899999998888999999999999999999999999753221 1111111
Q ss_pred HHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 699 AVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 699 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
...... .+.....+ ...+.+++.+||+.||++|||+.||++.+....
T Consensus 233 ~~~~~~--------~~~~~~~~----~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~ 279 (296)
T 4hgt_A 233 KKMSTP--------IEVLCKGY----PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 279 (296)
T ss_dssp HHHHSC--------HHHHTTTS----CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred ccccch--------hhhhhccC----CHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHH
Confidence 111100 00000111 235678888999999999999999999887443
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-38 Score=337.82 Aligned_cols=258 Identities=16% Similarity=0.214 Sum_probs=197.2
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
.++|+..+.||+|+||.||+|+. .+|+.||||++........+.+.+|++++++++||||+++++++.... .....
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~~~~~ 104 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRER---GAKHE 104 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEE---TTEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEecc---CCCce
Confidence 35688899999999999999996 579999999987654445678999999999999999999999986321 12356
Q ss_pred EEEEEecCCCCChhHHhhcC-CCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 555 IFLIFEYVPNGTLRSWISEG-HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
.++||||+++|+|.+++... .....+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 105 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~ 181 (317)
T 2buj_A 105 AWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSM 181 (317)
T ss_dssp EEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred eEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence 89999999999999998752 1234689999999999999999999998 9999999999999999999999999987
Q ss_pred cccccccc----------cccccccccccCccccccCC---CCcccceeehhHHHHHHHhCCCCCCCchh--HHHHHHHH
Q 003926 634 LLAENAEK----------VGHVIPYSGSIDPTNSARGK---LEEKIDIYDFGLILLEIIVGRPLKSRKEV--DLLKNQLQ 698 (786)
Q Consensus 634 ~~~~~~~~----------~~~~~~~~~~~aPe~~~~~~---~t~ksDVwSfGvvl~ElltG~~p~~~~~~--~~~~~~~~ 698 (786)
........ .....++..|+|||.+.... ++.++|||||||++|||++|+.||..... ......+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~- 260 (317)
T 2buj_A 182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAV- 260 (317)
T ss_dssp EESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHH-
T ss_pred hhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHh-
Confidence 54321110 11233577899999876543 68899999999999999999999853211 1111111
Q ss_pred HHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 699 AVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 699 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
... . .. +. .... ...+.+++.+||+.||.+|||+.|++++++
T Consensus 261 ---~~~---~-~~--~~-~~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 302 (317)
T 2buj_A 261 ---QNQ---L-SI--PQ-SPRH----SSALWQLLNSMMTVDPHQRPHIPLLLSQLE 302 (317)
T ss_dssp ---HCC------C--CC-CTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---hcc---C-CC--Cc-cccC----CHHHHHHHHHHhhcChhhCCCHHHHHHHhh
Confidence 000 0 00 00 0111 235678888999999999999999999996
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=365.46 Aligned_cols=312 Identities=21% Similarity=0.305 Sum_probs=274.1
Q ss_pred HHHHHHHHHHHhcCCCCC---------CCCCCCCCCCCCCCCCCCCccEEeC-CCCEEEEEeCCCCCCCCCCCCCcCCcc
Q 003926 30 SSQAQTLLRIQGLLNNPA---------VLSSWNITTEFCNTEPTSSLTVVCY-EESITQLHIVGNKRAPMLPLSFSMDSF 99 (786)
Q Consensus 30 ~~~~~~ll~~k~~~~~~~---------~l~~W~~~~~~C~w~~~~~~~v~c~-~~~v~~l~l~~~~~~~~l~~~~~~~~~ 99 (786)
..|++||.++++++..+. ...+|+.+++||.|. .+.||+|+ .++|+.|+|+++.+.|.+|.
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~--~~~GV~C~~~~~V~~L~L~~~~l~g~lp~------- 99 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWG--AQPGVSLNSNGRVTGLSLEGFGASGRVPD------- 99 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTT--CCTTEEECTTCCEEEEECTTSCCEEEECG-------
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCccccc--CCCCeEEcCCCCEEEEEecCcccCCcCCh-------
Confidence 468999999999986542 234799889999992 12369995 47999999999998877664
Q ss_pred ccccCCCCCCCEEEccCCC-------------------------------------------------------------
Q 003926 100 VTTLVKLPDLKVLRLVSLG------------------------------------------------------------- 118 (786)
Q Consensus 100 ~~~l~~l~~L~~L~L~~n~------------------------------------------------------------- 118 (786)
.+++|++|++|+|++|.
T Consensus 100 --~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~ 177 (636)
T 4eco_A 100 --AIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKK 177 (636)
T ss_dssp --GGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCC
T ss_pred --HHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCcccccccc
Confidence 67899999999999883
Q ss_pred -----------------CccCCCccCCCCCCCCEEeccCCCCCCC-----------------CCcccc--CCCCCcEEEc
Q 003926 119 -----------------LWGPLSGKISRLSSLEILNMSSNFLNGA-----------------IPQELS--ILTSLQTLIL 162 (786)
Q Consensus 119 -----------------l~g~~~~~~~~l~~L~~L~Ls~N~l~~~-----------------~p~~~~--~l~~L~~L~L 162 (786)
++| +|..|+++++|++|+|++|.++|. +|..++ ++++|++|+|
T Consensus 178 ~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L 256 (636)
T 4eco_A 178 SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEV 256 (636)
T ss_dssp CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEE
T ss_pred ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEe
Confidence 446 888999999999999999999996 999999 9999999999
Q ss_pred ccccCCCCCCcccCCCCCCCEEEccCCc-Ccc-cCCccccCC------CCCCEEEccCCcCCcCCCC---CCCCCcCCEE
Q 003926 163 DENMLAGRVPDWLGSLPILAVLSLRNNM-FNG-TLPDSFSYL------ENLRVLALSNNHFYGEVPD---FSGLTYLQVL 231 (786)
Q Consensus 163 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l------~~L~~L~Ls~N~l~~~~p~---~~~l~~L~~L 231 (786)
++|.+.|.+|..|+++++|++|+|++|+ ++| .+|..++++ ++|+.|+|++|+++ .+|. ++.+++|++|
T Consensus 257 ~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L 335 (636)
T 4eco_A 257 YNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGML 335 (636)
T ss_dssp ECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEE
T ss_pred cCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEE
Confidence 9999999999999999999999999998 999 899988887 99999999999999 5664 8999999999
Q ss_pred EcccCCCCCCCCcc--ccchhhhhccCCccCCcChhhhcCccc-cceeeccCccccCCCchhhCCCC--CCcEEEeecCC
Q 003926 232 DLENNALGPQFPKV--GKKLVTMILSKNKFRSAIPAEVSSYYQ-LQRLDLSSNRFVGPFPQALLSLP--SITYLNIADNK 306 (786)
Q Consensus 232 ~L~~N~l~~~~p~~--~~~L~~L~ls~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~l~~N~ 306 (786)
+|++|.++|.+|.. .++|+.|++++|+++ .+|..+.++++ |+.|+|++|+++ .+|..+..++ +|+.|++++|+
T Consensus 336 ~L~~N~l~g~ip~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~ 413 (636)
T 4eco_A 336 ECLYNQLEGKLPAFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNE 413 (636)
T ss_dssp ECCSCCCEEECCCCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSC
T ss_pred eCcCCcCccchhhhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCc
Confidence 99999999888843 368999999999998 88999999999 999999999999 7898888765 89999999999
Q ss_pred CCcccCccCC-------CCCCCCEEeCcCCcCCccCChhhh-cCCCCcEEEcCCcccCC
Q 003926 307 LTGKLFDDLS-------CNPELGFVDLSSNLLTGQLPNCLL-AGSKNRVVLYARNCLAA 357 (786)
Q Consensus 307 l~g~~~~~~~-------~~~~L~~l~ls~N~l~g~~p~~~~-~~~~~~~~~~~~N~l~~ 357 (786)
+++.+|..+. .+++|+.|+|++|+++ .+|..+. .+.+++.+++++|.++.
T Consensus 414 l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~~ 471 (636)
T 4eco_A 414 IGSVDGKNFDPLDPTPFKGINVSSINLSNNQIS-KFPKELFSTGSPLSSINLMGNMLTE 471 (636)
T ss_dssp TTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCC-SCCTHHHHTTCCCSEEECCSSCCSB
T ss_pred CCCcchhhhcccccccccCCCCCEEECcCCccC-cCCHHHHccCCCCCEEECCCCCCCC
Confidence 9999999888 7889999999999999 5666554 47889999999999873
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=336.86 Aligned_cols=264 Identities=19% Similarity=0.315 Sum_probs=201.5
Q ss_pred HHHhcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhc--CCCCCcceeeeeeeeccccCC
Q 003926 473 EEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISK--LRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 473 ~~~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~--l~H~NIv~l~g~~~~~~~~~~ 550 (786)
....++|...+.||+|+||.||+|+.. |+.||||++... ..+.+.+|++++.. ++||||+++++++.... .
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~---~ 110 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDN---G 110 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC---S
T ss_pred ccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC---C
Confidence 334567999999999999999999984 899999998643 35678899999887 79999999999986521 1
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhh--------cCCCCCccccCCCCCceeecCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLH--------TGIVPGVFSNNLKITDILLDQN 622 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH--------~~~~~~ivHrdlk~~NILld~~ 622 (786)
.....++||||+++|+|.+++.+. .+++..++.++.|++.||+||| +. +|+||||||+||+++.+
T Consensus 111 ~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~ 183 (342)
T 1b6c_B 111 TWTQLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKN 183 (342)
T ss_dssp SCCCEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTT
T ss_pred ccceeEEEEeecCCCcHHHHHhcc----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCC
Confidence 123689999999999999999753 5899999999999999999999 54 99999999999999999
Q ss_pred CcccccCCCcccccccccc-----cccccccccccCccccccC------CCCcccceeehhHHHHHHHhC----------
Q 003926 623 LVAKISSYNLPLLAENAEK-----VGHVIPYSGSIDPTNSARG------KLEEKIDIYDFGLILLEIIVG---------- 681 (786)
Q Consensus 623 ~~~kl~DfGl~~~~~~~~~-----~~~~~~~~~~~aPe~~~~~------~~t~ksDVwSfGvvl~ElltG---------- 681 (786)
+.+||+|||++........ .....++..|+|||.+... .++.++|||||||++|||+||
T Consensus 184 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~ 263 (342)
T 1b6c_B 184 GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDY 263 (342)
T ss_dssp SCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCC
T ss_pred CCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccccc
Confidence 9999999999865543321 2334577889999987654 234689999999999999999
Q ss_pred CCCCCCchh--HHHHHHHHHHHHhcccccccccccccccc-CcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 682 RPLKSRKEV--DLLKNQLQAVVTADESARRSMVDPAVNKA-CLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 682 ~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
+.||..... .......... .. ....+.+... ...+....+.+++.+||+.||++|||+.||++++....
T Consensus 264 ~~p~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~ 335 (342)
T 1b6c_B 264 QLPYYDLVPSDPSVEEMRKVV-CE------QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 335 (342)
T ss_dssp CCTTTTTSCSSCCHHHHHHHH-TT------SCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccCccccCcCcccHHHHHHHH-HH------HHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence 667654211 0111111111 11 1111222211 12345667889999999999999999999999997543
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-38 Score=339.87 Aligned_cols=271 Identities=18% Similarity=0.333 Sum_probs=196.5
Q ss_pred hcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHh--cCCCCCcceeeeeeeeccccCCCCc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELIS--KLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~--~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
.++|+..+.||+|+||.||+|+. +++.||||++.... ...+..|.+++. .++||||+++++++..... ....
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~--~~~~ 85 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTA--DGRM 85 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECT--TSCE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheeccccccc--CCCc
Confidence 35688889999999999999987 58999999986432 455666665544 5899999999987654322 2245
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCC------CCCccccCCCCCceeecCCCcccc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI------VPGVFSNNLKITDILLDQNLVAKI 627 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~------~~~ivHrdlk~~NILld~~~~~kl 627 (786)
..++||||+++|+|.+++... ..++..+..++.|+++||+|||+.+ .++|+||||||+|||++.++.+||
T Consensus 86 ~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL 161 (336)
T 3g2f_A 86 EYLLVMEYYPNGSLXKYLSLH----TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVI 161 (336)
T ss_dssp EEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEE
T ss_pred eEEEEEecCCCCcHHHHHhhc----ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEE
Confidence 679999999999999999753 3589999999999999999999863 338999999999999999999999
Q ss_pred cCCCccccccccc---------ccccccccccccCcccccc-------CCCCcccceeehhHHHHHHHhCCCCCC-Cchh
Q 003926 628 SSYNLPLLAENAE---------KVGHVIPYSGSIDPTNSAR-------GKLEEKIDIYDFGLILLEIIVGRPLKS-RKEV 690 (786)
Q Consensus 628 ~DfGl~~~~~~~~---------~~~~~~~~~~~~aPe~~~~-------~~~t~ksDVwSfGvvl~ElltG~~p~~-~~~~ 690 (786)
+|||+++...... ......++..|+|||.+.. ..++.++|||||||++|||+||+.|+. ....
T Consensus 162 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~ 241 (336)
T 3g2f_A 162 SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESV 241 (336)
T ss_dssp CCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCC
T ss_pred eeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccch
Confidence 9999996543211 1123457789999998865 346679999999999999999976542 2111
Q ss_pred HHH-------------HHHHHHHHHhcccccccccccccccc--CcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 691 DLL-------------KNQLQAVVTADESARRSMVDPAVNKA--CLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 691 ~~~-------------~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
... ........... .. .+.++.. ........+.+++.+||+.||++|||+.||++.|..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ 315 (336)
T 3g2f_A 242 PEYQMAFQTEVGNHPTFEDMQVLVSRE--KQ----RPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAE 315 (336)
T ss_dssp CCCCCTTHHHHCSSCCHHHHHHHHTTS--CC----CCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred hHHHHhhhcccCCCchHHHHHhhhccc--cc----CCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHH
Confidence 000 00000000000 01 1111111 112345578899999999999999999999999973
Q ss_pred HHHhhhhhcc
Q 003926 756 AAQVQDAWHS 765 (786)
Q Consensus 756 ~~~~~~~~~~ 765 (786)
. .+.|..
T Consensus 316 l---l~~~~~ 322 (336)
T 3g2f_A 316 L---MMIWER 322 (336)
T ss_dssp H---HHCCCC
T ss_pred H---HHHHHh
Confidence 3 345544
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-38 Score=340.00 Aligned_cols=258 Identities=14% Similarity=0.151 Sum_probs=197.7
Q ss_pred cCCCccCccCCCCCceeEEEEecC---------CcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcce----------
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKN---------GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVS---------- 537 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~---------g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~---------- 537 (786)
++|...+.||+|+||.||+|+... ++.||||++... +.+.+|++++++++|||||+
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 568888999999999999999653 789999998643 46889999999999999998
Q ss_pred -----eeeeeeeccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCC
Q 003926 538 -----ALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNL 612 (786)
Q Consensus 538 -----l~g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdl 612 (786)
+++++.. .....++||||+ +|+|.+++.... ...+++..++.++.|++.||.|||+. +|+||||
T Consensus 117 ~~i~~~~~~~~~------~~~~~~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Di 185 (352)
T 2jii_A 117 LAIPTCMGFGVH------QDKYRFLVLPSL-GRSLQSALDVSP-KHVLSERSVLQVACRLLDALEFLHEN---EYVHGNV 185 (352)
T ss_dssp CSCCCCCEEEEE------TTTEEEEEEECC-CEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCC
T ss_pred cCccchhhcccc------CCcEEEEEecCC-CcCHHHHHHhCC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCC
Confidence 4455442 135789999999 999999998631 24699999999999999999999998 9999999
Q ss_pred CCCceeecCCC--cccccCCCcccccccccc--------cccccccccccCccccccCCCCcccceeehhHHHHHHHhCC
Q 003926 613 KITDILLDQNL--VAKISSYNLPLLAENAEK--------VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR 682 (786)
Q Consensus 613 k~~NILld~~~--~~kl~DfGl~~~~~~~~~--------~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~ 682 (786)
||+||+++.++ .+||+|||+++....... .....++..|+|||......++.++|||||||++|||++|+
T Consensus 186 kp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~ 265 (352)
T 2jii_A 186 TAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGF 265 (352)
T ss_dssp CGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSC
T ss_pred CHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCC
Confidence 99999999998 899999999965533211 12235778899999998888999999999999999999999
Q ss_pred CCCCCch--hHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 683 PLKSRKE--VDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 683 ~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.||.... ...+.......... .....++..... .....+.+++.+||+.||++|||+.||++.+....
T Consensus 266 ~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 335 (352)
T 2jii_A 266 LPWTNCLPNTEDIMKQKQKFVDK----PGPFVGPCGHWI---RPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALL 335 (352)
T ss_dssp CTTGGGTTCHHHHHHHHHHHHHS----CCCEECTTSCEE---CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred CCcccCCcCHHHHHHHHHhccCC----hhhhhhhccccC---CCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHH
Confidence 9997642 22222222221111 111111111000 11235667888999999999999999999987543
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-37 Score=329.37 Aligned_cols=252 Identities=19% Similarity=0.302 Sum_probs=196.0
Q ss_pred CCccCccCCCCCceeEEEEec-C---CcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 479 FDTSAFMGEGSQGQMYRGRLK-N---GTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~-~---g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
|...+.||+|+||+||+|+.. + +..||+|.+..... ...+.|.+|++++++++||||+++++++... ..
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------~~ 96 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPP------EG 96 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCS------SS
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecC------CC
Confidence 455688999999999999853 2 33799999875433 2346799999999999999999999998641 23
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++||||+.+|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 97 ~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~ 171 (298)
T 3pls_A 97 LPHVLLPYMCHGDLLQFIRSP--QRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLA 171 (298)
T ss_dssp CCEEEECCCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSS
T ss_pred CcEEEEecccCCCHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCc
Confidence 358999999999999999763 24689999999999999999999998 9999999999999999999999999998
Q ss_pred ccccccc-----ccccccccccccCccccccCCCCcccceeehhHHHHHHHhC-CCCCCCchhHHHHHHHHHHHHhcccc
Q 003926 634 LLAENAE-----KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVG-RPLKSRKEVDLLKNQLQAVVTADESA 707 (786)
Q Consensus 634 ~~~~~~~-----~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG-~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (786)
+...... ......++..|+|||......++.++||||||+++|||++| .+|+...+.......+.. ..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~---~~--- 245 (298)
T 3pls_A 172 RDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQ---GR--- 245 (298)
T ss_dssp CTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHT---TC---
T ss_pred ccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhc---CC---
Confidence 6543221 11223456679999999888899999999999999999995 555655444333322211 00
Q ss_pred ccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 708 RRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 708 ~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
. ......++ ..+.+++.+||+.||++|||+.|+++.+...
T Consensus 246 --~---~~~~~~~~----~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~ 285 (298)
T 3pls_A 246 --R---LPQPEYCP----DSLYQVMQQCWEADPAVRPTFRVLVGEVEQI 285 (298)
T ss_dssp --C---CCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --C---CCCCccch----HHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 0 00111122 3567888899999999999999999998744
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-38 Score=342.71 Aligned_cols=272 Identities=17% Similarity=0.292 Sum_probs=202.9
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
.++|...+.||+|+||.||+|+.. +|+.||||++...... ....+.+|++++++++||||+++++++....+. ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~--~~~ 87 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFE--NFN 87 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCST--TCC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccC--ccc
Confidence 457888999999999999999965 6899999999754322 245788999999999999999999987643221 235
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++||||++ |+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 88 ~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 159 (353)
T 2b9h_A 88 EVYIIQELMQ-TDLHRVIST----QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLA 159 (353)
T ss_dssp CEEEEECCCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEeccC-ccHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEecccc
Confidence 6899999998 699999875 2589999999999999999999997 9999999999999999999999999998
Q ss_pred cccccccc-----------cccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHH
Q 003926 634 LLAENAEK-----------VGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVV 701 (786)
Q Consensus 634 ~~~~~~~~-----------~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~ 701 (786)
........ .....++..|+|||.+.. ..++.++|||||||++|||++|++||...........+....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~ 239 (353)
T 2b9h_A 160 RIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGII 239 (353)
T ss_dssp EECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred cccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHh
Confidence 65432111 112356778999998654 678999999999999999999999998765433222222111
Q ss_pred Hhcc-c-cccccccc----------ccc----ccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 702 TADE-S-ARRSMVDP----------AVN----KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 702 ~~~~-~-~~~~~~d~----------~~~----~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.... . .......+ ... ..........+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 311 (353)
T 2b9h_A 240 GTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQT 311 (353)
T ss_dssp CCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred CCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence 1100 0 00000000 000 0000112345678889999999999999999999998753
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-38 Score=343.47 Aligned_cols=270 Identities=19% Similarity=0.235 Sum_probs=203.1
Q ss_pred HhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCC-CC-----Ccceeeeeeeeccc
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLR-HR-----HLVSALGHCFECYF 547 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~-----NIv~l~g~~~~~~~ 547 (786)
..++|+..+.||+|+||+||+|+.. +++.||||+++... ....++.+|+++++.++ |+ +|+++++++..
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~--- 127 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF--- 127 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEE---
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeecc---
Confidence 3568889999999999999999865 68999999997432 22466788999988885 55 48999998865
Q ss_pred cCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeec--CCCcc
Q 003926 548 DDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD--QNLVA 625 (786)
Q Consensus 548 ~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld--~~~~~ 625 (786)
.+..++||||++ |+|.+++.... ...+++..+..++.|++.||.|||.. ..+|+||||||+|||++ .++.+
T Consensus 128 ----~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~ 200 (382)
T 2vx3_A 128 ----RNHLCLVFEMLS-YNLYDLLRNTN-FRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAI 200 (382)
T ss_dssp ----TTEEEEEEECCC-CBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCE
T ss_pred ----CCceEEEEecCC-CCHHHHHhhcC-cCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcE
Confidence 457899999996 59999998643 23589999999999999999999952 23899999999999994 57889
Q ss_pred cccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcc
Q 003926 626 KISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADE 705 (786)
Q Consensus 626 kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 705 (786)
||+|||+++..... .....++..|+|||.+....++.++|||||||++|||+||++||...........+........
T Consensus 201 kL~DFG~a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~ 278 (382)
T 2vx3_A 201 KIVDFGSSCQLGQR--IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPP 278 (382)
T ss_dssp EECCCTTCEETTCC--CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCC
T ss_pred EEEeccCceecccc--cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 99999998765332 2344677889999999888899999999999999999999999986544333222222111100
Q ss_pred ccc-----------ccccc-----------------ccc--------------------cccCcHHHHHHHHHHHHHhcc
Q 003926 706 SAR-----------RSMVD-----------------PAV--------------------NKACLDESLKTMMEVCVRCLL 737 (786)
Q Consensus 706 ~~~-----------~~~~d-----------------~~~--------------------~~~~~~~~~~~~~~l~~~Cl~ 737 (786)
... ..+.+ +.. ...........+.+++.+||+
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~ 358 (382)
T 2vx3_A 279 AHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLD 358 (382)
T ss_dssp HHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcC
Confidence 000 00000 000 000112334578899999999
Q ss_pred CCCCCCCCHHHHHHHHHHHH
Q 003926 738 KNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 738 ~dP~~RPt~~evl~~l~~~~ 757 (786)
.||++|||+.|+++|+||.+
T Consensus 359 ~dP~~Rpta~e~L~hp~f~~ 378 (382)
T 2vx3_A 359 YDPKTRIQPYYALQHSFFKK 378 (382)
T ss_dssp SCTTTSCCHHHHTTSGGGCC
T ss_pred CChhhCCCHHHHhcCccccc
Confidence 99999999999999998754
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=340.08 Aligned_cols=247 Identities=15% Similarity=0.131 Sum_probs=193.5
Q ss_pred HhcCCCccCccCCCCCceeEEEE------ecCCcEEEEEEecccCCCChHHHHHHHHHHhcCC---CCCcceeeeeeeec
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGR------LKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLR---HRHLVSALGHCFEC 545 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~------~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~---H~NIv~l~g~~~~~ 545 (786)
..++|...+.||+|+||+||+|+ ..+++.||||+++.. ...+|.+|++++++++ |+||+++++++..
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~- 138 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF- 138 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC-
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec-
Confidence 35678888999999999999994 446899999998653 4678889999999887 9999999999875
Q ss_pred cccCCCCceEEEEEecCCCCChhHHhhcC--CCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC--
Q 003926 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEG--HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ-- 621 (786)
Q Consensus 546 ~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~--~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~-- 621 (786)
.+..++|||||++|+|.+++... .....++|..++.++.|+++||+|||+. +||||||||+|||++.
T Consensus 139 ------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~ 209 (365)
T 3e7e_A 139 ------QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGF 209 (365)
T ss_dssp ------SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGG
T ss_pred ------CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccc
Confidence 45689999999999999999742 1234699999999999999999999997 9999999999999998
Q ss_pred ---------CCcccccCCCcccccc---cccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCch
Q 003926 622 ---------NLVAKISSYNLPLLAE---NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKE 689 (786)
Q Consensus 622 ---------~~~~kl~DfGl~~~~~---~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~ 689 (786)
++.+||+|||+++... .........++..|+|||.+.+..|+.++|||||||++|||+||+.||....
T Consensus 210 ~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~ 289 (365)
T 3e7e_A 210 LEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNE 289 (365)
T ss_dssp TCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEE
T ss_pred cCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCC
Confidence 8999999999996443 2223344568889999999988889999999999999999999999985432
Q ss_pred hHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCC-CCHHHHHHHHH
Q 003926 690 VDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAER-PSVEDVLWNLQ 754 (786)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~R-Pt~~evl~~l~ 754 (786)
... ... ..........+ .+.+++..|++.+|.+| |+++++.+.+.
T Consensus 290 ~~~-------------~~~----~~~~~~~~~~~---~~~~~~~~~l~~~p~~r~~~~~~l~~~l~ 335 (365)
T 3e7e_A 290 GGE-------------CKP----EGLFRRLPHLD---MWNEFFHVMLNIPDCHHLPSLDLLRQKLK 335 (365)
T ss_dssp TTE-------------EEE----CSCCTTCSSHH---HHHHHHHHHHCCCCTTCCCCHHHHHHHHH
T ss_pred CCc-------------eee----chhccccCcHH---HHHHHHHHHcCCCCCCcchHHHHHHHHHH
Confidence 110 000 01111111223 33456678999999999 56666665554
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=338.84 Aligned_cols=269 Identities=15% Similarity=0.212 Sum_probs=199.2
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
++|...+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|+.++++++||||+++++++...... ....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~-~~~~ 102 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSL-RNFY 102 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSG-GGCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccc-ccce
Confidence 46778899999999999999964 6999999999764322 246789999999999999999999988642110 0112
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++||||++ |+|.+++.. .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~ 173 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL-----KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLA 173 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCT
T ss_pred eEEEEecccc-CCHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccc
Confidence 4599999998 699888743 489999999999999999999997 9999999999999999999999999998
Q ss_pred cccccccccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhc-ccccccc
Q 003926 634 LLAENAEKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD-ESARRSM 711 (786)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 711 (786)
...... .....++..|+|||.+.. ..++.++|||||||++|||++|++||...+.......+....... ......+
T Consensus 174 ~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 251 (353)
T 3coi_A 174 RHADAE--MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKL 251 (353)
T ss_dssp TC----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTC
T ss_pred cCCCCC--ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHH
Confidence 654322 223456788999998766 678999999999999999999999997655433222221111100 0000000
Q ss_pred c---------------cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 712 V---------------DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 712 ~---------------d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
. .+.. ..........+.+++.+||+.||++|||+.|+++|+||...
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~ 312 (353)
T 3coi_A 252 NDKAAKSYIQSLPQTPRKDF-TQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF 312 (353)
T ss_dssp SCHHHHHHHHTSCBCSSCCT-TTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred hhHHHHHHHHhCcCCCCccH-HHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhc
Confidence 0 0000 00111223467788899999999999999999999998643
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-38 Score=337.36 Aligned_cols=266 Identities=17% Similarity=0.240 Sum_probs=204.6
Q ss_pred cCCCccCccCCCCCceeEEEEe-c-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCC------cceeeeeeeecccc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-K-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRH------LVSALGHCFECYFD 548 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~N------Iv~l~g~~~~~~~~ 548 (786)
++|+..+.||+|+||.||+|+. . +|+.||||+++... ...+.+.+|++++++++|+| |+++++++..
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~---- 88 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH---- 88 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE----
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeeccccc----
Confidence 4688899999999999999986 3 68999999987432 23467889999999887665 9999998865
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC-------
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ------- 621 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~------- 621 (786)
.+..++||||+ +|+|.+++.... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.
T Consensus 89 ---~~~~~lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~ 160 (339)
T 1z57_A 89 ---HGHICIVFELL-GLSTYDFIKENG-FLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAY 160 (339)
T ss_dssp ---TTEEEEEEECC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEE
T ss_pred ---CCcEEEEEcCC-CCCHHHHHHhcC-CCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEecccccccc
Confidence 45789999999 889999997643 24689999999999999999999997 9999999999999987
Q ss_pred ------------CCcccccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCch
Q 003926 622 ------------NLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKE 689 (786)
Q Consensus 622 ------------~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~ 689 (786)
++.+||+|||++...... .....++..|+|||.+....++.++|||||||++|||++|++||....
T Consensus 161 ~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 238 (339)
T 1z57_A 161 NPKIKRDERTLINPDIKVVDFGSATYDDEH--HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHD 238 (339)
T ss_dssp C----CEEEEESCCCEEECCCSSCEETTSC--CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSC
T ss_pred CCccccccccccCCCceEeeCcccccCccc--cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Confidence 667999999998654332 233456788999999988889999999999999999999999997655
Q ss_pred hHHHHHHHHHHHHhccccc------cccc---------------------ccc-ccccCcHHHHHHHHHHHHHhccCCCC
Q 003926 690 VDLLKNQLQAVVTADESAR------RSMV---------------------DPA-VNKACLDESLKTMMEVCVRCLLKNPA 741 (786)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~------~~~~---------------------d~~-~~~~~~~~~~~~~~~l~~~Cl~~dP~ 741 (786)
.......+........... .... .+. ............+.+++.+||+.||+
T Consensus 239 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~ 318 (339)
T 1z57_A 239 SKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPA 318 (339)
T ss_dssp HHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTT
T ss_pred hHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcc
Confidence 4433333322211100000 0000 000 00011223456788999999999999
Q ss_pred CCCCHHHHHHHHHHHH
Q 003926 742 ERPSVEDVLWNLQFAA 757 (786)
Q Consensus 742 ~RPt~~evl~~l~~~~ 757 (786)
+|||+.|+++|+||..
T Consensus 319 ~Rpt~~ell~hp~f~~ 334 (339)
T 1z57_A 319 KRITLREALKHPFFDL 334 (339)
T ss_dssp TSCCHHHHTTSGGGGG
T ss_pred cccCHHHHhcCHHHHH
Confidence 9999999999998764
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-37 Score=345.77 Aligned_cols=259 Identities=12% Similarity=0.143 Sum_probs=197.3
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
.++|+..+.||+|+||.||+|+. .+++.||||++..... ..++.+|+++++.++|++.+..+.++.. ..+.
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~------~~~~ 77 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGV------EGDY 77 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEE------ETTE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEe------eCCE
Confidence 35788899999999999999995 5799999998765432 3458899999999988655555544432 1456
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceee---cCCCcccccCCC
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL---DQNLVAKISSYN 631 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILl---d~~~~~kl~DfG 631 (786)
.++||||+ +|+|.+++.... ..+++..++.++.|++.||+|||+. +||||||||+|||+ +.++.+||+|||
T Consensus 78 ~~lvme~~-g~sL~~ll~~~~--~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFG 151 (483)
T 3sv0_A 78 NVLVMDLL-GPSLEDLFNFCS--RKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFG 151 (483)
T ss_dssp EEEEEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCT
T ss_pred EEEEEECC-CCCHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCC
Confidence 89999999 999999997532 3699999999999999999999997 99999999999999 688999999999
Q ss_pred cccccccccc--------cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHh
Q 003926 632 LPLLAENAEK--------VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTA 703 (786)
Q Consensus 632 l~~~~~~~~~--------~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~ 703 (786)
+++....... .....++..|+|||.+....++.++|||||||++|||++|+.||...........+......
T Consensus 152 la~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~ 231 (483)
T 3sv0_A 152 LAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK 231 (483)
T ss_dssp TCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHH
T ss_pred cceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhc
Confidence 9976543221 12456788899999999889999999999999999999999999764322211111111111
Q ss_pred ccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 704 DESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 704 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
. ..... +.+...+ ..++.+++.+||+.||++||++.+|++.+...
T Consensus 232 ~---~~~~~-~~l~~~~----p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l 276 (483)
T 3sv0_A 232 K---VATSI-EALCRGY----PTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL 276 (483)
T ss_dssp H---HHSCH-HHHHTTS----CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred c---ccccH-HHHhcCC----cHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 0 00000 0111112 23567888999999999999999999888644
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-38 Score=346.73 Aligned_cols=271 Identities=17% Similarity=0.202 Sum_probs=202.2
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCC--------CCCcceeeeeeeecc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLR--------HRHLVSALGHCFECY 546 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~--------H~NIv~l~g~~~~~~ 546 (786)
.++|...+.||+|+||+||+|+. .+++.||||+++... ...+.+.+|++++++++ |+||+++++++....
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 35788899999999999999985 468999999997432 23467899999999986 788999999886321
Q ss_pred ccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC---
Q 003926 547 FDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL--- 623 (786)
Q Consensus 547 ~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~--- 623 (786)
......++||||+ +|+|.+++.... ...+++..+..++.|++.||+|||+.+ +|+||||||+|||++.++
T Consensus 115 ---~~~~~~~lv~e~~-~~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~ 187 (397)
T 1wak_A 115 ---VNGTHICMVFEVL-GHHLLKWIIKSN-YQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYI 187 (397)
T ss_dssp ---TTEEEEEEEECCC-CCBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHH
T ss_pred ---CCCceEEEEEecc-CccHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhh
Confidence 1245789999999 567766665432 246899999999999999999999842 899999999999999775
Q ss_pred ----------------------------------------------cccccCCCcccccccccccccccccccccCcccc
Q 003926 624 ----------------------------------------------VAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNS 657 (786)
Q Consensus 624 ----------------------------------------------~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~ 657 (786)
.+||+|||++...... .....++..|+|||.+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~--~~~~~gt~~y~aPE~~ 265 (397)
T 1wak_A 188 RRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH--FTEDIQTRQYRSLEVL 265 (397)
T ss_dssp HHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC--SCSCCSCGGGCCHHHH
T ss_pred hhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc--CccCCCCCcccCChhh
Confidence 7999999998655432 2334578899999999
Q ss_pred ccCCCCcccceeehhHHHHHHHhCCCCCCCchh-------HHHHHHHHHHHHhcc------ccccccc----------cc
Q 003926 658 ARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEV-------DLLKNQLQAVVTADE------SARRSMV----------DP 714 (786)
Q Consensus 658 ~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~-------~~~~~~~~~~~~~~~------~~~~~~~----------d~ 714 (786)
....++.++|||||||++|||+||++||..... +.+............ ....... +.
T Consensus 266 ~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (397)
T 1wak_A 266 IGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKL 345 (397)
T ss_dssp HTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCC
T ss_pred cCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccccccc
Confidence 888899999999999999999999999864321 111111111100000 0000000 00
Q ss_pred c---------ccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 715 A---------VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 715 ~---------~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
. -......+....+.+++.+||+.||++|||+.||++|+||.
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~ 396 (397)
T 1wak_A 346 KPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLN 396 (397)
T ss_dssp CCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGG
T ss_pred CCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCcccc
Confidence 0 00122455667888999999999999999999999998863
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-37 Score=368.04 Aligned_cols=312 Identities=21% Similarity=0.277 Sum_probs=264.9
Q ss_pred CCHHHHHHHHHHHhcCCCCCCCCCCCCCC-----CC--CCCCC----CCC---ccEEeC-CCCEEEEEeCCCCCCCCCCC
Q 003926 28 LQSSQAQTLLRIQGLLNNPAVLSSWNITT-----EF--CNTEP----TSS---LTVVCY-EESITQLHIVGNKRAPMLPL 92 (786)
Q Consensus 28 ~~~~~~~~ll~~k~~~~~~~~l~~W~~~~-----~~--C~w~~----~~~---~~v~c~-~~~v~~l~l~~~~~~~~l~~ 92 (786)
+..+|++||++||+++.+| +|+.+. +| |+|.. ..| .||.|+ .++|+.|+|+++++.|.+|.
T Consensus 266 ~~~~d~~ALl~~k~~l~~~----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~ip~ 341 (876)
T 4ecn_A 266 EYIKDYKALKAIWEALDGK----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVPD 341 (876)
T ss_dssp HHHHHHHHHHHHHHHTTGG----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEECG
T ss_pred cchHHHHHHHHHHHHcCCC----CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCcCch
Confidence 4567999999999999876 797654 56 99911 012 479997 58999999999998877664
Q ss_pred CCcCCccccccCCCCCCCEEEc-cCCCCccC-------------------------------------------------
Q 003926 93 SFSMDSFVTTLVKLPDLKVLRL-VSLGLWGP------------------------------------------------- 122 (786)
Q Consensus 93 ~~~~~~~~~~l~~l~~L~~L~L-~~n~l~g~------------------------------------------------- 122 (786)
.+++|++|++|+| ++|.+.|.
T Consensus 342 ---------~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~ 412 (876)
T 4ecn_A 342 ---------AIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNP 412 (876)
T ss_dssp ---------GGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCT
T ss_pred ---------HHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCc
Confidence 6789999999999 77765554
Q ss_pred ---------------------------CCccCCCCCCCCEEeccCCCCCC-----------------CCCcccc--CCCC
Q 003926 123 ---------------------------LSGKISRLSSLEILNMSSNFLNG-----------------AIPQELS--ILTS 156 (786)
Q Consensus 123 ---------------------------~~~~~~~l~~L~~L~Ls~N~l~~-----------------~~p~~~~--~l~~ 156 (786)
+|..|++|++|+.|+|++|.|+| .+|..++ ++++
T Consensus 413 ~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~ 492 (876)
T 4ecn_A 413 EMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKD 492 (876)
T ss_dssp TSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTT
T ss_pred cccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCC
Confidence 78889999999999999999998 3899988 9999
Q ss_pred CcEEEcccccCCCCCCcccCCCCCCCEEEccCCc-Ccc-cCCccccCCC-------CCCEEEccCCcCCcCCCC---CCC
Q 003926 157 LQTLILDENMLAGRVPDWLGSLPILAVLSLRNNM-FNG-TLPDSFSYLE-------NLRVLALSNNHFYGEVPD---FSG 224 (786)
Q Consensus 157 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l~-------~L~~L~Ls~N~l~~~~p~---~~~ 224 (786)
|++|+|++|.+.+.+|..|+++++|+.|+|++|+ ++| .+|..|++++ +|+.|+|++|+++ .+|. |.+
T Consensus 493 L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~ 571 (876)
T 4ecn_A 493 LTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQK 571 (876)
T ss_dssp CCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTT
T ss_pred CCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhc
Confidence 9999999999999999999999999999999998 998 8888776665 9999999999999 5665 899
Q ss_pred CCcCCEEEcccCCCCCCCCcc--ccchhhhhccCCccCCcChhhhcCccc-cceeeccCccccCCCchhhCCCCC--CcE
Q 003926 225 LTYLQVLDLENNALGPQFPKV--GKKLVTMILSKNKFRSAIPAEVSSYYQ-LQRLDLSSNRFVGPFPQALLSLPS--ITY 299 (786)
Q Consensus 225 l~~L~~L~L~~N~l~~~~p~~--~~~L~~L~ls~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~~--L~~ 299 (786)
+++|+.|+|++|.++ .+|.. .++|+.|+|++|+++ .+|..+.++++ |+.|+|++|+|+ .+|..+..++. |+.
T Consensus 572 L~~L~~L~Ls~N~l~-~lp~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~ 648 (876)
T 4ecn_A 572 MVKLGLLDCVHNKVR-HLEAFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGS 648 (876)
T ss_dssp CTTCCEEECTTSCCC-BCCCCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEE
T ss_pred CCCCCEEECCCCCcc-cchhhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCE
Confidence 999999999999998 66643 368999999999998 88989999999 999999999998 78888887765 999
Q ss_pred EEeecCCCCcccCccC---C--CCCCCCEEeCcCCcCCccCChhhh-cCCCCcEEEcCCcccCC
Q 003926 300 LNIADNKLTGKLFDDL---S--CNPELGFVDLSSNLLTGQLPNCLL-AGSKNRVVLYARNCLAA 357 (786)
Q Consensus 300 L~l~~N~l~g~~~~~~---~--~~~~L~~l~ls~N~l~g~~p~~~~-~~~~~~~~~~~~N~l~~ 357 (786)
|+|++|+++|.+|... . .+++|+.|+|++|.++ .+|..+. .++++..+++++|.+..
T Consensus 649 L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~~ 711 (876)
T 4ecn_A 649 VDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMTS 711 (876)
T ss_dssp EECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCSC
T ss_pred EECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCCc
Confidence 9999999998776432 2 3458999999999999 6777765 67889999999998873
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-38 Score=332.04 Aligned_cols=261 Identities=20% Similarity=0.330 Sum_probs=194.5
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccc------c
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYF------D 548 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~------~ 548 (786)
.++|+..+.||+|+||.||+|+.. +|+.||||++.... ...+.+.+|++++++++||||+++++++.+... .
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH-HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 456888999999999999999964 79999999986432 234679999999999999999999998864210 0
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCccccc
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKIS 628 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~ 628 (786)
....+..++||||+++|+|.+++... ...+++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~ 158 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSE--NLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIG 158 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHS--CGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEEC
T ss_pred cccCCceEEEEecCCCCCHHHhhhcc--ccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEe
Confidence 11245789999999999999999853 23578899999999999999999998 99999999999999999999999
Q ss_pred CCCcccccccc---------------cccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCc-hhH
Q 003926 629 SYNLPLLAENA---------------EKVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRK-EVD 691 (786)
Q Consensus 629 DfGl~~~~~~~---------------~~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~-~~~ 691 (786)
|||++...... .......++..|+|||.+... .++.++|||||||++|||++ |+... +..
T Consensus 159 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~ 235 (303)
T 1zy4_A 159 DFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERV 235 (303)
T ss_dssp CCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHH
T ss_pred eCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHH
Confidence 99998654321 111234567789999988654 68999999999999999998 44322 111
Q ss_pred HHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 692 LLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.. ........ ....+. ........+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 236 ~~---~~~~~~~~-----~~~~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~ 289 (303)
T 1zy4_A 236 NI---LKKLRSVS-----IEFPPD----FDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPV 289 (303)
T ss_dssp HH---HHHHHSTT-----CCCCTT----CCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCC
T ss_pred HH---HHhccccc-----cccCcc----ccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCC
Confidence 11 11111100 001111 12222345678888999999999999999999998753
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-38 Score=336.51 Aligned_cols=265 Identities=14% Similarity=0.228 Sum_probs=181.9
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC-ChHHHHHHHH-HHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH-STRNFMHHIE-LISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-~~~~f~~E~~-~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.++|+..+.||+|+||.||+|+.. +|+.||||+++..... ...++.+|+. +++.++||||++++|++.. .
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~-------~ 93 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFR-------E 93 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEEC-------S
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEe-------C
Confidence 356778899999999999999975 7999999999765322 2345666766 7788899999999999875 4
Q ss_pred ceEEEEEecCCCCChhHHhhcC--CCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 553 SRIFLIFEYVPNGTLRSWISEG--HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~--~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
+..++||||+++ +|.+++... .....+++..+..++.|++.||.|||+. .+|+||||||+||+++.++.+||+||
T Consensus 94 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl~Df 170 (327)
T 3aln_A 94 GDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDF 170 (327)
T ss_dssp SEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEECCC
T ss_pred CceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEEccC
Confidence 568999999985 888877521 1134689999999999999999999984 38999999999999999999999999
Q ss_pred CcccccccccccccccccccccCcccc----ccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccc
Q 003926 631 NLPLLAENAEKVGHVIPYSGSIDPTNS----ARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADES 706 (786)
Q Consensus 631 Gl~~~~~~~~~~~~~~~~~~~~aPe~~----~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (786)
|+++............++..|+|||.+ ....++.++|||||||++|||++|+.||....... ..+ ..
T Consensus 171 g~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~----~~--- 241 (327)
T 3aln_A 171 GISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF--DQL----TQ--- 241 (327)
T ss_dssp SSSCC------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------------CC---
T ss_pred CCceecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH--HHH----HH---
Confidence 998665443333334577889999987 45668999999999999999999999987532110 000 00
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~ 760 (786)
......+.+...........+.+++.+||+.||++|||+.||++|+|+....+
T Consensus 242 -~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~~ 294 (327)
T 3aln_A 242 -VVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYEE 294 (327)
T ss_dssp -CCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHHH
T ss_pred -HhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHhHh
Confidence 00000011111111112235678888999999999999999999999886543
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-38 Score=337.02 Aligned_cols=259 Identities=15% Similarity=0.285 Sum_probs=197.2
Q ss_pred HHHHHhcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCC--ChHHHHHHHHHHhcCC--CCCcceeeeeeeecc
Q 003926 471 ELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCH--STRNFMHHIELISKLR--HRHLVSALGHCFECY 546 (786)
Q Consensus 471 ~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~--H~NIv~l~g~~~~~~ 546 (786)
.+....++|+..+.||+|+||.||+|+..+++.||||++...... ..+.|.+|++++++++ |+||+++++++..
T Consensus 22 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~-- 99 (313)
T 3cek_A 22 SMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT-- 99 (313)
T ss_dssp EEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEEC--
T ss_pred eeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeec--
Confidence 333445678889999999999999999888999999999755432 3467899999999997 5999999998875
Q ss_pred ccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCccc
Q 003926 547 FDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAK 626 (786)
Q Consensus 547 ~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~k 626 (786)
.+..++||| +.+|+|.+++... ..+++..+..++.|+++||.|||+. +|+||||||+||++++ +.+|
T Consensus 100 -----~~~~~lv~e-~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~k 166 (313)
T 3cek_A 100 -----DQYIYMVME-CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLK 166 (313)
T ss_dssp -----SSEEEEEEC-CCSEEHHHHHHHC---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEE
T ss_pred -----CCEEEEEEe-cCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEE
Confidence 456899999 5678999999863 3689999999999999999999997 9999999999999975 7899
Q ss_pred ccCCCcccccccccc---cccccccccccCcccccc-----------CCCCcccceeehhHHHHHHHhCCCCCCCchhHH
Q 003926 627 ISSYNLPLLAENAEK---VGHVIPYSGSIDPTNSAR-----------GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL 692 (786)
Q Consensus 627 l~DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~-----------~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~ 692 (786)
|+|||++........ .....++..|+|||.... ..++.++|||||||++|||++|+.||.......
T Consensus 167 L~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~ 246 (313)
T 3cek_A 167 LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 246 (313)
T ss_dssp ECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH
T ss_pred EeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHH
Confidence 999999865533221 123356788999998764 468899999999999999999999986532211
Q ss_pred HHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 693 LKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
. .+....... . ........ ...+.+++.+||+.||++||++.|+++|+|+..
T Consensus 247 -~-~~~~~~~~~---~----~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~ 298 (313)
T 3cek_A 247 -S-KLHAIIDPN---H----EIEFPDIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 298 (313)
T ss_dssp -H-HHHHHHCTT---S----CCCCCCCS----CHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHC
T ss_pred -H-HHHHHHhcc---c----ccCCcccc----hHHHHHHHHHHccCCcccCcCHHHHhcCccccC
Confidence 0 111111100 0 01111111 235667888999999999999999999999864
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-38 Score=330.23 Aligned_cols=253 Identities=20% Similarity=0.325 Sum_probs=190.2
Q ss_pred cCCCccCccCCCCCceeEEEEec--CCc--EEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK--NGT--FVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDD 549 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~--~g~--~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~ 549 (786)
++|+..+.||+|+||.||+|++. ++. .||||+++.... ...+.|.+|++++++++||||+++++++..
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 92 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT----- 92 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-----
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcc-----
Confidence 46788899999999999999853 333 699999875432 234679999999999999999999998864
Q ss_pred CCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccC
Q 003926 550 SSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISS 629 (786)
Q Consensus 550 ~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 629 (786)
+..++||||+++|+|.+++.... ..+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|
T Consensus 93 ---~~~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~D 164 (291)
T 1u46_A 93 ---PPMKMVTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGD 164 (291)
T ss_dssp ---SSCEEEEECCTTCBHHHHHHHHG--GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECC
T ss_pred ---CCceeeEecccCCCHHHHHHhcc--CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcc
Confidence 23789999999999999997532 3589999999999999999999997 999999999999999999999999
Q ss_pred CCcccccccccc----cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhc
Q 003926 630 YNLPLLAENAEK----VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTAD 704 (786)
Q Consensus 630 fGl~~~~~~~~~----~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 704 (786)
||++........ .....++..|+|||......++.++||||||+++|||++ |+.||...........+ ....
T Consensus 165 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~---~~~~ 241 (291)
T 1u46_A 165 FGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI---DKEG 241 (291)
T ss_dssp CTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH---HTSC
T ss_pred ccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHH---HccC
Confidence 999865533221 112334557999999888889999999999999999999 99999765543332211 1110
Q ss_pred cccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 705 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
. .+.....+ ...+.+++.+||+.||++|||+.|+++++...
T Consensus 242 ---~----~~~~~~~~----~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 282 (291)
T 1u46_A 242 ---E----RLPRPEDC----PQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 282 (291)
T ss_dssp ---C----CCCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ---C----CCCCCcCc----CHHHHHHHHHHccCCcccCcCHHHHHHHHHHh
Confidence 0 00111112 23567888899999999999999999988744
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-37 Score=334.47 Aligned_cols=263 Identities=16% Similarity=0.225 Sum_probs=176.6
Q ss_pred hcCCCcc-CccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 476 TNNFDTS-AFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 476 ~~~f~~~-~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
.++|... +.||+|+||+||+|+.. +|+.||||++... .....+....++.++||||+++++++.... ....
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~---~~~~ 99 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYENMH---HGKR 99 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEE---TTEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHHHHHhhcc---CCCc
Confidence 4567774 46999999999999976 6999999998642 122222333466779999999999886421 1234
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC---CCcccccCC
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ---NLVAKISSY 630 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~---~~~~kl~Df 630 (786)
..++||||+++|+|.+++.... ...+++.++..++.|++.||.|||+. +|+||||||+||+++. ++.+||+||
T Consensus 100 ~~~lv~e~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Df 175 (336)
T 3fhr_A 100 CLLIIMECMEGGELFSRIQERG-DQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDF 175 (336)
T ss_dssp EEEEEEECCTTEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCC
T ss_pred eEEEEEeccCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEecc
Confidence 5899999999999999998642 24699999999999999999999998 9999999999999986 455999999
Q ss_pred CcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 631 NLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 631 Gl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
|++...... ......++..|+|||.+....++.++|||||||++|||++|+.||.................... ..
T Consensus 176 g~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~---~~ 251 (336)
T 3fhr_A 176 GFAKETTQN-ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQ---YG 251 (336)
T ss_dssp TTCEEC-----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC------------------------C
T ss_pred ccceecccc-ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccc---cc
Confidence 998655432 22234567889999999888899999999999999999999999965433222111111000000 00
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
...+ ........+.+++.+||+.||++|||+.|+++|+|+.+.
T Consensus 252 ~~~~-----~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 294 (336)
T 3fhr_A 252 FPNP-----EWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQS 294 (336)
T ss_dssp CCTT-----TSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTG
T ss_pred cCch-----hhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcccccc
Confidence 0000 011122356788889999999999999999999998753
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-37 Score=344.86 Aligned_cols=253 Identities=17% Similarity=0.215 Sum_probs=186.7
Q ss_pred CCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCCCCceEEE
Q 003926 479 FDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSSVSRIFL 557 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~~~~~~~L 557 (786)
|...+.||+|+||+||.+...+|+.||||++.... .+.+.+|+++++++ +|||||++++++.. .+..++
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~-------~~~~~l 86 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETT-------DRFLYI 86 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEEC-------SSEEEE
T ss_pred eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEec-------CCeEEE
Confidence 34467899999999987766679999999986532 45688999999886 89999999988764 457899
Q ss_pred EEecCCCCChhHHhhcCCCCC-C---CCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCC-----------
Q 003926 558 IFEYVPNGTLRSWISEGHAHQ-S---LTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN----------- 622 (786)
Q Consensus 558 V~Ey~~~GsL~~~l~~~~~~~-~---l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~----------- 622 (786)
|||||+ |+|.+++....... . .++..++.++.|++.||+|||+. +|+||||||+|||++.+
T Consensus 87 v~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~ 162 (434)
T 2rio_A 87 ALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGA 162 (434)
T ss_dssp EECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCC
T ss_pred EEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCC
Confidence 999996 69999998642211 1 13334578999999999999997 99999999999999754
Q ss_pred --CcccccCCCcccccccccc-----cccccccccccCcccccc-------CCCCcccceeehhHHHHHHHh-CCCCCCC
Q 003926 623 --LVAKISSYNLPLLAENAEK-----VGHVIPYSGSIDPTNSAR-------GKLEEKIDIYDFGLILLEIIV-GRPLKSR 687 (786)
Q Consensus 623 --~~~kl~DfGl~~~~~~~~~-----~~~~~~~~~~~aPe~~~~-------~~~t~ksDVwSfGvvl~Ellt-G~~p~~~ 687 (786)
+.+||+|||+++....... .....++..|+|||.+.. ..++.++|||||||++|||+| |++||..
T Consensus 163 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~ 242 (434)
T 2rio_A 163 ENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 242 (434)
T ss_dssp CSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCS
T ss_pred CceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCC
Confidence 4899999999976543221 123467889999998865 568999999999999999999 9999975
Q ss_pred chhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 688 KEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
..... ...+. .. ... +.............+.+++.+||+.||++|||+.||++|+||.
T Consensus 243 ~~~~~-~~i~~----~~-~~~-----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~ 300 (434)
T 2rio_A 243 KYSRE-SNIIR----GI-FSL-----DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFW 300 (434)
T ss_dssp TTTHH-HHHHH----TC-CCC-----CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGS
T ss_pred chhhH-HHHhc----CC-CCc-----ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccC
Confidence 43221 11111 00 000 0111111234556788899999999999999999999999873
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-37 Score=335.53 Aligned_cols=268 Identities=16% Similarity=0.217 Sum_probs=202.9
Q ss_pred cCCCccCccCCCCCceeEEEEec-CC-cEEEEEEecccCCCChHHHHHHHHHHhcCCCCC------cceeeeeeeecccc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NG-TFVAIRCLKMKKCHSTRNFMHHIELISKLRHRH------LVSALGHCFECYFD 548 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g-~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~N------Iv~l~g~~~~~~~~ 548 (786)
++|+..+.||+|+||+||+|+.. ++ +.||||+++... ...+.+.+|++++++++|++ ++.+.+++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~---- 93 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF---- 93 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE----
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee----
Confidence 57888999999999999999964 44 799999997432 23467889999999998776 8888887764
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceee---------
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL--------- 619 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILl--------- 619 (786)
.+..++||||+ +|++.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+|||+
T Consensus 94 ---~~~~~lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~ 165 (355)
T 2eu9_A 94 ---HGHMCIAFELL-GKNTFEFLKENN-FQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLY 165 (355)
T ss_dssp ---TTEEEEEEECC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEE
T ss_pred ---CCeEEEEEecc-CCChHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccc
Confidence 45789999999 567777776532 24689999999999999999999997 99999999999999
Q ss_pred ----------cCCCcccccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCch
Q 003926 620 ----------DQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKE 689 (786)
Q Consensus 620 ----------d~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~ 689 (786)
+.++.+||+|||+++..... .....++..|+|||.+....++.++|||||||++|||++|++||....
T Consensus 166 ~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 243 (355)
T 2eu9_A 166 NEHKSCEEKSVKNTSIRVADFGSATFDHEH--HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHE 243 (355)
T ss_dssp CCC-CCCEEEESCCCEEECCCTTCEETTSC--CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccccccccccCCCcEEEeecCcccccccc--ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Confidence 66789999999998654322 233467788999999988899999999999999999999999998755
Q ss_pred hHHHHHHHHHHHHhccccc------cccc-------c--------------c-cccccCcHHHHHHHHHHHHHhccCCCC
Q 003926 690 VDLLKNQLQAVVTADESAR------RSMV-------D--------------P-AVNKACLDESLKTMMEVCVRCLLKNPA 741 (786)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~------~~~~-------d--------------~-~~~~~~~~~~~~~~~~l~~~Cl~~dP~ 741 (786)
.......+........... .... + + .............+.+++.+||+.||+
T Consensus 244 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~ 323 (355)
T 2eu9_A 244 NREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPA 323 (355)
T ss_dssp HHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTT
T ss_pred HHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChh
Confidence 4433332222211100000 0000 0 0 000001123345778999999999999
Q ss_pred CCCCHHHHHHHHHHHHHh
Q 003926 742 ERPSVEDVLWNLQFAAQV 759 (786)
Q Consensus 742 ~RPt~~evl~~l~~~~~~ 759 (786)
+|||+.|+++|+||....
T Consensus 324 ~Rpt~~e~l~hp~f~~~~ 341 (355)
T 2eu9_A 324 QRITLAEALLHPFFAGLT 341 (355)
T ss_dssp TSCCHHHHTTSGGGGGCC
T ss_pred hCcCHHHHhcChhhcCCC
Confidence 999999999999987643
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-37 Score=359.73 Aligned_cols=255 Identities=18% Similarity=0.314 Sum_probs=200.6
Q ss_pred HHhcCCCccCccCCCCCceeEEEEec----CCcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeeecccc
Q 003926 474 EATNNFDTSAFMGEGSQGQMYRGRLK----NGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFD 548 (786)
Q Consensus 474 ~~~~~f~~~~~iG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~ 548 (786)
...++|+..+.||+|+||.||+|+.. .+..||||+++..... ..+.|.+|+.++++++|||||+++|++.+
T Consensus 387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~---- 462 (656)
T 2j0j_A 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE---- 462 (656)
T ss_dssp CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS----
T ss_pred cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec----
Confidence 34567888899999999999999864 2568999998754322 24679999999999999999999998743
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCccccc
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKIS 628 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~ 628 (786)
+..++||||+++|+|.+++.... ..+++..++.++.|+++||.|||+. +|+||||||+|||++.++.+||+
T Consensus 463 ----~~~~lv~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~ 533 (656)
T 2j0j_A 463 ----NPVWIIMELCTLGELRSFLQVRK--FSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLG 533 (656)
T ss_dssp ----SSCEEEEECCTTCBHHHHHHHTT--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEEC
T ss_pred ----CceEEEEEcCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEE
Confidence 34799999999999999997532 3589999999999999999999997 99999999999999999999999
Q ss_pred CCCccccccccccc--ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcc
Q 003926 629 SYNLPLLAENAEKV--GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADE 705 (786)
Q Consensus 629 DfGl~~~~~~~~~~--~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 705 (786)
|||+++........ ....++..|+|||.+....++.++|||||||++|||++ |++||...........+.. ..
T Consensus 534 DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~---~~- 609 (656)
T 2j0j_A 534 DFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN---GE- 609 (656)
T ss_dssp CCCCCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHH---TC-
T ss_pred ecCCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc---CC-
Confidence 99999765432221 12234567999999988899999999999999999997 9999976554433222211 10
Q ss_pred ccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 706 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
. +..+..++ ..+.+++.+||+.||++|||+.||++++...
T Consensus 610 --~-----~~~~~~~~----~~l~~li~~~l~~dP~~RPs~~el~~~L~~i 649 (656)
T 2j0j_A 610 --R-----LPMPPNCP----PTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649 (656)
T ss_dssp --C-----CCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --C-----CCCCcccc----HHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 0 01111222 3567888899999999999999999998754
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-37 Score=330.47 Aligned_cols=254 Identities=19% Similarity=0.319 Sum_probs=195.3
Q ss_pred HHHHhcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccC
Q 003926 472 LEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDD 549 (786)
Q Consensus 472 l~~~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~ 549 (786)
+....++|+..+.||+|+||.||+|+.+. .||||+++.... ...+.|.+|++++++++||||+++++++..
T Consensus 28 ~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----- 100 (319)
T 2y4i_B 28 WDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS----- 100 (319)
T ss_dssp SSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEEC-----
T ss_pred ccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEec-----
Confidence 33445678889999999999999999764 499999875432 234568899999999999999999999875
Q ss_pred CCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccC
Q 003926 550 SSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISS 629 (786)
Q Consensus 550 ~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 629 (786)
.+..++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++ ++.+||+|
T Consensus 101 --~~~~~iv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~D 172 (319)
T 2y4i_B 101 --PPHLAIITSLCKGRTLYSVVRDA--KIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITD 172 (319)
T ss_dssp --SSCEEEECBCCCSEEHHHHTTSS--CCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECC
T ss_pred --CCceEEEeecccCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEee
Confidence 35689999999999999999763 23689999999999999999999997 999999999999998 67999999
Q ss_pred CCcccccccc------cccccccccccccCcccccc---------CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHH
Q 003926 630 YNLPLLAENA------EKVGHVIPYSGSIDPTNSAR---------GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLK 694 (786)
Q Consensus 630 fGl~~~~~~~------~~~~~~~~~~~~~aPe~~~~---------~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~ 694 (786)
||++...... .......++..|+|||.... ..++.++|||||||++|||++|+.||.........
T Consensus 173 fg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~ 252 (319)
T 2y4i_B 173 FGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAII 252 (319)
T ss_dssp CSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHH
T ss_pred cCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 9997544211 11223346778999998753 45789999999999999999999999876544332
Q ss_pred HHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 695 NQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
..+.. . ........ .++ ..+.+++.+||+.||++|||+.|+++.+.
T Consensus 253 ~~~~~---~---~~~~~~~~----~~~----~~l~~li~~~l~~~p~~Rpt~~~l~~~l~ 298 (319)
T 2y4i_B 253 WQMGT---G---MKPNLSQI----GMG----KEISDILLFCWAFEQEERPTFTKLMDMLE 298 (319)
T ss_dssp HHHHT---T---CCCCCCCS----SCC----TTHHHHHHHHHCSSTTTSCCHHHHHHHHT
T ss_pred HHhcc---C---CCCCCCcC----CCC----HHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 22111 0 00111111 111 24567888999999999999999999886
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-36 Score=325.12 Aligned_cols=259 Identities=16% Similarity=0.296 Sum_probs=180.8
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCC--hHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHS--TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~--~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.++|+..+.||+|+||.||+|+.. +|+.||||++....... .+.+.++..+++.++||||+++++++.. .
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~-------~ 96 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFIT-------N 96 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-------S
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEec-------C
Confidence 456788899999999999999975 69999999997654321 2334455567888999999999999875 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..++||||+ ++.+..+.... ...+++..+..++.|+++||.|||+. .+|+||||||+||+++.++.+||+|||+
T Consensus 97 ~~~~lv~e~~-~~~~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~ 171 (318)
T 2dyl_A 97 TDVFIAMELM-GTCAEKLKKRM--QGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFGI 171 (318)
T ss_dssp SEEEEEECCC-SEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHH--HCCCCCCCCGGGEEECTTSCEEECCCTT
T ss_pred CcEEEEEecc-CCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhh--CCEEeCCCCHHHEEECCCCCEEEEECCC
Confidence 5789999999 44555554431 23689999999999999999999972 1899999999999999999999999999
Q ss_pred ccccccccccccccccccccCccccc-----cCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSA-----RGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESA 707 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~-----~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (786)
+.............++..|+|||.+. ...++.++|||||||++|||++|+.||....... ..+........
T Consensus 172 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~~-- 247 (318)
T 2dyl_A 172 SGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDF--EVLTKVLQEEP-- 247 (318)
T ss_dssp C--------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHH--HHHHHHHHSCC--
T ss_pred chhccCCccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccH--HHHHHHhccCC--
Confidence 86554433333445778899999874 4568999999999999999999999997532211 11111111110
Q ss_pred ccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 708 RRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 708 ~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
... +. ...++ ..+.+++.+||+.||.+||++.|+++|+|+...
T Consensus 248 --~~~-~~-~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 290 (318)
T 2dyl_A 248 --PLL-PG-HMGFS----GDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRY 290 (318)
T ss_dssp --CCC-CS-SSCCC----HHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHHH
T ss_pred --CCC-Cc-cCCCC----HHHHHHHHHHccCChhHCcCHHHHhhCHHHHhc
Confidence 000 00 00111 346678889999999999999999999998764
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-37 Score=343.89 Aligned_cols=251 Identities=17% Similarity=0.208 Sum_probs=186.0
Q ss_pred cCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCCCCceE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
.+|+..+.||+|+||+||.....+|+.||||++.... ...+.+|+++++++ +|||||++++++.. ....
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~~-------~~~~ 93 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEKD-------RQFQ 93 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEEE-------TTEE
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEec-------CCEE
Confidence 4577889999999999765555678999999986533 23467899999999 89999999998765 4568
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeec-----CCCcccccCC
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD-----QNLVAKISSY 630 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld-----~~~~~kl~Df 630 (786)
|+|||||+ |+|.+++.... ..+.+...+.++.|+++||.|||+. +|+||||||+|||++ ....+||+||
T Consensus 94 ~lv~E~~~-g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DF 167 (432)
T 3p23_A 94 YIAIELCA-ATLQEYVEQKD--FAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDF 167 (432)
T ss_dssp EEEEECCS-EEHHHHHHSSS--CCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCT
T ss_pred EEEEECCC-CCHHHHHHhcC--CCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecc
Confidence 99999997 69999998643 2344455678999999999999997 999999999999994 3345789999
Q ss_pred Cccccccccc----ccccccccccccCccccc---cCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHH
Q 003926 631 NLPLLAENAE----KVGHVIPYSGSIDPTNSA---RGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVT 702 (786)
Q Consensus 631 Gl~~~~~~~~----~~~~~~~~~~~~aPe~~~---~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~ 702 (786)
|+++...... ......++..|+|||.+. ...++.++|||||||++|||+| |++||........... ..
T Consensus 168 G~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~----~~ 243 (432)
T 3p23_A 168 GLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANIL----LG 243 (432)
T ss_dssp TEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHH----TT
T ss_pred cceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHH----hc
Confidence 9997654321 223346788999999986 4567889999999999999999 8999865433221111 00
Q ss_pred hccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 703 ADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 703 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
.. ......+ .......+.+++.+||+.||++|||+.||++|+||.
T Consensus 244 ~~---~~~~~~~------~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~ 288 (432)
T 3p23_A 244 AC---SLDCLHP------EKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFW 288 (432)
T ss_dssp CC---CCTTSCT------TCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTC
T ss_pred cC---CccccCc------cccccHHHHHHHHHHHhCCHhhCCCHHHHHhCcccc
Confidence 00 0011111 112233466888999999999999999999999864
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-37 Score=356.05 Aligned_cols=276 Identities=16% Similarity=0.139 Sum_probs=204.9
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
++|...+.||+|+||.||+|+. .+|+.||||+++.... ...+.|.+|++++++++|||||++++++..... ....+.
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~-~~~~~~ 92 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQK-LAPNDL 92 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCC-CCTTSS
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeeccccc-ccCCCe
Confidence 5789999999999999999996 4689999999875432 234679999999999999999999998753111 122456
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCc---ccccCCC
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV---AKISSYN 631 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~---~kl~DfG 631 (786)
.++|||||++|+|.+++........+++..+..++.+++.||+|||+. +|+||||||+||+++.++. +||+|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 799999999999999998754444688999999999999999999997 9999999999999996654 8999999
Q ss_pred cccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHH---HHhc---c
Q 003926 632 LPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAV---VTAD---E 705 (786)
Q Consensus 632 l~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~---~~~~---~ 705 (786)
++.............++..|+|||.+....++.++|||||||++|||++|+.||....... .+.... .... .
T Consensus 170 ~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~--~~~~~i~~~~~~~~~~~ 247 (676)
T 3qa8_A 170 YAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPV--QWHGKVREKSNEHIVVY 247 (676)
T ss_dssp CCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHH--HSSTTCC------CCSC
T ss_pred cccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchh--hhhhhhhcccchhhhhh
Confidence 9976655444445567889999999988899999999999999999999999986532110 000000 0000 0
Q ss_pred ccccc--ccccc--ccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 706 SARRS--MVDPA--VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 706 ~~~~~--~~d~~--~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
..... ..... ............+.+++.+||+.||++|||+.|+++|.||...
T Consensus 248 ~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l 304 (676)
T 3qa8_A 248 DDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQAL 304 (676)
T ss_dssp CCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHH
T ss_pred hhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHH
Confidence 00000 00000 0112233345677889999999999999999999999988763
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-36 Score=334.24 Aligned_cols=272 Identities=15% Similarity=0.203 Sum_probs=202.9
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCC-----------CCCcceeeeeeee
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLR-----------HRHLVSALGHCFE 544 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-----------H~NIv~l~g~~~~ 544 (786)
++|...+.||+|+||+||+|+. .+++.||||++.... ...+.+.+|++++++++ |+||+++++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 4688889999999999999996 578999999987432 23467889999999886 8999999999875
Q ss_pred ccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeec----
Q 003926 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD---- 620 (786)
Q Consensus 545 ~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld---- 620 (786)
.. ......++||||+ +|+|.+++.... ...+++..+..++.|++.||+|||+.+ +|+||||||+|||++
T Consensus 98 ~~---~~~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~ 170 (373)
T 1q8y_A 98 KG---PNGVHVVMVFEVL-GENLLALIKKYE-HRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDS 170 (373)
T ss_dssp EE---TTEEEEEEEECCC-CEEHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEET
T ss_pred cC---CCCceEEEEEecC-CCCHHHHHHHhh-ccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCC
Confidence 21 1234689999999 899999997632 245899999999999999999999842 899999999999994
Q ss_pred --CCCcccccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchh-------H
Q 003926 621 --QNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEV-------D 691 (786)
Q Consensus 621 --~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~-------~ 691 (786)
..+.+||+|||++...... .....++..|+|||.+....++.++|||||||++|||+||+.||..... +
T Consensus 171 ~~~~~~~kl~Dfg~a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~ 248 (373)
T 1q8y_A 171 PENLIQIKIADLGNACWYDEH--YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDD 248 (373)
T ss_dssp TTTEEEEEECCCTTCEETTBC--CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHH
T ss_pred CcCcceEEEcccccccccCCC--CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHH
Confidence 4558999999998655432 2334577889999999888899999999999999999999999975431 1
Q ss_pred HHHHHHHHHHHhcc----------------cccccccccc---------ccccCcHHHHHHHHHHHHHhccCCCCCCCCH
Q 003926 692 LLKNQLQAVVTADE----------------SARRSMVDPA---------VNKACLDESLKTMMEVCVRCLLKNPAERPSV 746 (786)
Q Consensus 692 ~~~~~~~~~~~~~~----------------~~~~~~~d~~---------~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~ 746 (786)
.+............ .....+.... -....+......+.+++.+||+.||++|||+
T Consensus 249 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 328 (373)
T 1q8y_A 249 HIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADA 328 (373)
T ss_dssp HHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCH
T ss_pred HHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCH
Confidence 11111111100000 0000000000 0012234566788899999999999999999
Q ss_pred HHHHHHHHHHHH
Q 003926 747 EDVLWNLQFAAQ 758 (786)
Q Consensus 747 ~evl~~l~~~~~ 758 (786)
.||++|+||.+.
T Consensus 329 ~ell~hp~f~~~ 340 (373)
T 1q8y_A 329 GGLVNHPWLKDT 340 (373)
T ss_dssp HHHHTCGGGTTC
T ss_pred HHHhhChhhhcc
Confidence 999999998764
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-37 Score=332.25 Aligned_cols=249 Identities=16% Similarity=0.237 Sum_probs=199.8
Q ss_pred HHhcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCC------ChHHHHHHHHHHhcCC--CCCcceeeeeeee
Q 003926 474 EATNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCH------STRNFMHHIELISKLR--HRHLVSALGHCFE 544 (786)
Q Consensus 474 ~~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~------~~~~f~~E~~~l~~l~--H~NIv~l~g~~~~ 544 (786)
...++|+..+.||+|+||.||+|+. .+|+.||||+++..... ..+.+.+|++++++++ |+||+++++++..
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~ 119 (320)
T 3a99_A 40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 119 (320)
T ss_dssp CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence 3456788899999999999999985 47899999999765432 2345788999999996 5999999999875
Q ss_pred ccccCCCCceEEEEEecCCC-CChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeec-CC
Q 003926 545 CYFDDSSVSRIFLIFEYVPN-GTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD-QN 622 (786)
Q Consensus 545 ~~~~~~~~~~~~LV~Ey~~~-GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld-~~ 622 (786)
.+..++||||+.+ |+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++ ++
T Consensus 120 -------~~~~~lv~e~~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~ 186 (320)
T 3a99_A 120 -------PDSFVLILERPEPVQDLFDFITER---GALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNR 186 (320)
T ss_dssp -------SSEEEEEEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTT
T ss_pred -------CCcEEEEEEcCCCCccHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCC
Confidence 4568999999986 8999999753 3589999999999999999999997 999999999999999 78
Q ss_pred CcccccCCCcccccccccccccccccccccCccccccCCC-CcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHH
Q 003926 623 LVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVV 701 (786)
Q Consensus 623 ~~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~-t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~ 701 (786)
+.+||+|||++....... .....++..|+|||.+....+ +.++|||||||++|||++|+.||..... ..
T Consensus 187 ~~~kL~Dfg~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-----~~---- 256 (320)
T 3a99_A 187 GELKLIDFGSGALLKDTV-YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-----II---- 256 (320)
T ss_dssp TEEEECCCTTCEECCSSC-BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-----HH----
T ss_pred CCEEEeeCcccccccccc-ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh-----hh----
Confidence 999999999987654322 233457788999998876665 6889999999999999999999975321 00
Q ss_pred HhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 702 TADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 702 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
. .. .... ...+ ..+.+++.+||+.||++|||+.||++|+|+...
T Consensus 257 ~-~~----~~~~----~~~~----~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~ 300 (320)
T 3a99_A 257 R-GQ----VFFR----QRVS----SECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 300 (320)
T ss_dssp H-CC----CCCS----SCCC----HHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSC
T ss_pred c-cc----cccc----ccCC----HHHHHHHHHHccCChhhCcCHHHHhcCHhhcCc
Confidence 0 00 0011 1112 346678889999999999999999999987653
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-35 Score=355.87 Aligned_cols=261 Identities=31% Similarity=0.409 Sum_probs=183.1
Q ss_pred ccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCC
Q 003926 100 VTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLP 179 (786)
Q Consensus 100 ~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 179 (786)
|..+.++++|++|+|++|.+++.+|..|+++++|+.|+|++|.+++.+|..+..+++|++|+|++|++++.+|..+.+++
T Consensus 411 p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 490 (768)
T 3rgz_A 411 PPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCT 490 (768)
T ss_dssp CGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCT
T ss_pred CHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCC
Confidence 34455555566666666666555555555566666666666666555565555566666666666666555565566666
Q ss_pred CCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCCCcCCEEEcccCCCCCCCCcccc-----------
Q 003926 180 ILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKVGK----------- 247 (786)
Q Consensus 180 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~p~~~~----------- 247 (786)
+|++|+|++|++++.+|..|+++++|+.|+|++|+++|.+|. +..+++|++|+|++|.++|.+|....
T Consensus 491 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~ 570 (768)
T 3rgz_A 491 NLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFI 570 (768)
T ss_dssp TCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTT
T ss_pred CCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcc
Confidence 666666666666655665555666666666666666555553 55556666666666655555553210
Q ss_pred --------------------------------------chhhhhccCCccCCcChhhhcCccccceeeccCccccCCCch
Q 003926 248 --------------------------------------KLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQ 289 (786)
Q Consensus 248 --------------------------------------~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 289 (786)
.+..++++.|.+.|.+|..+..+++|+.|||++|+++|.+|.
T Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~ 650 (768)
T 3rgz_A 571 AGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPK 650 (768)
T ss_dssp CSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCG
T ss_pred ccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCH
Confidence 011223344555555666666778899999999999999999
Q ss_pred hhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCCCCC
Q 003926 290 ALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAAGNE 360 (786)
Q Consensus 290 ~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~~~~ 360 (786)
.|+++++|+.|+|++|+++|.+|..++.+++|+.|||++|+++|.+|..+..+..+..+++++|.++|..+
T Consensus 651 ~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP 721 (768)
T 3rgz_A 651 EIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721 (768)
T ss_dssp GGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECC
T ss_pred HHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999998544
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-37 Score=326.08 Aligned_cols=249 Identities=20% Similarity=0.291 Sum_probs=192.5
Q ss_pred HHHhcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCC------ChHHHHHHHHHHhcC----CCCCcceeeee
Q 003926 473 EEATNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCH------STRNFMHHIELISKL----RHRHLVSALGH 541 (786)
Q Consensus 473 ~~~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~------~~~~f~~E~~~l~~l----~H~NIv~l~g~ 541 (786)
....++|...+.||+|+||.||+|+. .+++.||||+++..... ....+.+|+++++++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 34467899999999999999999985 46899999999755331 223467899999988 89999999998
Q ss_pred eeeccccCCCCceEEEEEec-CCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeec
Q 003926 542 CFECYFDDSSVSRIFLIFEY-VPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD 620 (786)
Q Consensus 542 ~~~~~~~~~~~~~~~LV~Ey-~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld 620 (786)
+.. .+..++|||| +++|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++
T Consensus 107 ~~~-------~~~~~~v~e~~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~ 173 (312)
T 2iwi_A 107 FET-------QEGFMLVLERPLPAQDLFDYITEK---GPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILID 173 (312)
T ss_dssp C------------CEEEEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEE
T ss_pred Eec-------CCeEEEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEe
Confidence 764 3457999999 8999999999763 3589999999999999999999997 999999999999999
Q ss_pred -CCCcccccCCCcccccccccccccccccccccCccccccCCCC-cccceeehhHHHHHHHhCCCCCCCchhHHHHHHHH
Q 003926 621 -QNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLE-EKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQ 698 (786)
Q Consensus 621 -~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t-~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~ 698 (786)
.++.+||+|||++....... .....++..|+|||......+. .++||||||+++|||++|+.||..... ..
T Consensus 174 ~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~- 246 (312)
T 2iwi_A 174 LRRGCAKLIDFGSGALLHDEP-YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE-----IL- 246 (312)
T ss_dssp TTTTEEEECCCSSCEECCSSC-BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-----HH-
T ss_pred CCCCeEEEEEcchhhhcccCc-ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH-----Hh-
Confidence 88999999999987654322 2344577889999988766654 589999999999999999999975321 00
Q ss_pred HHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 699 AVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 699 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
... ....... ...+.+++.+||+.||++|||+.|+++|.|+..
T Consensus 247 ---~~~---------~~~~~~~----~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~ 289 (312)
T 2iwi_A 247 ---EAE---------LHFPAHV----SPDCCALIRRCLAPKPSSRPSLEEILLDPWMQT 289 (312)
T ss_dssp ---HTC---------CCCCTTS----CHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC
T ss_pred ---hhc---------cCCcccC----CHHHHHHHHHHccCChhhCcCHHHHhcChhhcC
Confidence 000 0011111 234667888999999999999999999888654
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-36 Score=316.77 Aligned_cols=241 Identities=15% Similarity=0.249 Sum_probs=181.6
Q ss_pred cCCCcc-CccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHH-hcCCCCCcceeeeeeeeccccCCCCc
Q 003926 477 NNFDTS-AFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELI-SKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 477 ~~f~~~-~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l-~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
++|... +.||+|+||.||+|+. .+++.||||+++. ...+.+|++++ +..+||||+++++++.... ....
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~---~~~~ 88 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLY---AGRK 88 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEE---TTEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhc---CCCc
Confidence 445555 7899999999999996 4689999999853 35678899988 6679999999999886421 1235
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC---CCcccccCC
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ---NLVAKISSY 630 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~---~~~~kl~Df 630 (786)
..++||||+++|+|.+++.... ...+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.+||+||
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Df 164 (299)
T 3m2w_A 89 CLLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDF 164 (299)
T ss_dssp EEEEEECCCCSCBHHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCC
T ss_pred eEEEEEeecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEecc
Confidence 6899999999999999998642 24689999999999999999999997 9999999999999998 788999999
Q ss_pred CcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 631 NLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 631 Gl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
|++.... ...++.++|||||||++|||+||++||.......... .......
T Consensus 165 g~a~~~~---------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~-------~~~~~~~- 215 (299)
T 3m2w_A 165 GFAKETT---------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP-------GMKTRIR- 215 (299)
T ss_dssp TTCEECT---------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------C-------CSCCSSC-
T ss_pred ccccccc---------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhH-------HHHHHHh-
Confidence 9874321 1346779999999999999999999996543221100 0000000
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
.................+.+++.+||+.||++|||+.|+++|+|+.+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~ 263 (299)
T 3m2w_A 216 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 263 (299)
T ss_dssp TTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTG
T ss_pred hccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhccc
Confidence 000000000001123457788889999999999999999999998764
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-35 Score=311.62 Aligned_cols=230 Identities=14% Similarity=0.126 Sum_probs=177.9
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCC---hHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHS---TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~---~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
+.|...+.||+|+||.||+|+.. +|+.||||++....... .+.|.+|++++++++||||+++++++.. .
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-------~ 103 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHT-------R 103 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-------T
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEE-------C
Confidence 45888899999999999999975 58999999998654432 3679999999999999999999999875 3
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..|+||||+++|+|.+++... ....+...++.|++.||+|||+. +|+||||||+|||++.++.+||+++|.
T Consensus 104 ~~~~lv~e~~~g~~L~~~l~~~-----~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~~ 175 (286)
T 3uqc_A 104 AGGLVVAEWIRGGSLQEVADTS-----PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPAT 175 (286)
T ss_dssp TEEEEEEECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCCC
T ss_pred CcEEEEEEecCCCCHHHHHhcC-----CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEeccc
Confidence 5689999999999999999642 35557888999999999999998 999999999999999999999985542
Q ss_pred ccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
++ .++.++|||||||++|||+||+.||.......... ...........
T Consensus 176 -------------------~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~------~~~~~~~~~~~ 223 (286)
T 3uqc_A 176 -------------------MP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLA------PAERDTAGQPI 223 (286)
T ss_dssp -------------------CT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSE------ECCBCTTSCBC
T ss_pred -------------------cC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhH------HHHHHhccCCC
Confidence 22 36889999999999999999999997543211000 00000000000
Q ss_pred cc-cccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 713 DP-AVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 713 d~-~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
.+ .... .....+.+++.+||+.||++| |+.|+++.|.....
T Consensus 224 ~~~~~~~----~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~ 265 (286)
T 3uqc_A 224 EPADIDR----DIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATA 265 (286)
T ss_dssp CHHHHCT----TSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC
T ss_pred Chhhccc----CCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhc
Confidence 00 0111 122356788889999999999 99999999986543
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-36 Score=334.64 Aligned_cols=256 Identities=13% Similarity=0.128 Sum_probs=187.0
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCC---CChHHHHHHHHHHhcCCC-CCcceeeee---------
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRH-RHLVSALGH--------- 541 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H-~NIv~l~g~--------- 541 (786)
+..|...+.||+|+||+||+|+. .+|+.||||++..... ...+.|.+|+.+++.++| +|......+
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 34566778999999999999994 5799999999884432 235789999999999987 333222111
Q ss_pred eeecc-------ccC---CCCceEEEEEecCCCCChhHHhhc----CCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCc
Q 003926 542 CFECY-------FDD---SSVSRIFLIFEYVPNGTLRSWISE----GHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGV 607 (786)
Q Consensus 542 ~~~~~-------~~~---~~~~~~~LV~Ey~~~GsL~~~l~~----~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~i 607 (786)
+.... ... ......+++|+++ +|+|.+++.. ......++|..++.++.|+++||+|||+. +|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 232 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence 00000 000 0022357777766 5799998841 11234588999999999999999999997 99
Q ss_pred cccCCCCCceeecCCCcccccCCCcccccccccccccccccccccCcccc----------ccCCCCcccceeehhHHHHH
Q 003926 608 FSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNS----------ARGKLEEKIDIYDFGLILLE 677 (786)
Q Consensus 608 vHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~----------~~~~~t~ksDVwSfGvvl~E 677 (786)
+||||||+|||++.++.+||+|||+++..... .....+ ..|+|||.+ ....++.++|||||||++||
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~--~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~e 309 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS--AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYW 309 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTEE--ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCCc--cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHH
Confidence 99999999999999999999999998655432 233455 889999988 55568899999999999999
Q ss_pred HHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 678 IIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 678 lltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
|+||+.||........ ...++... ...+ ..+.+++.+||+.||++||++.|+++|+||.+
T Consensus 310 lltg~~Pf~~~~~~~~--------------~~~~~~~~--~~~~----~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~ 369 (413)
T 3dzo_A 310 IWCADLPNTDDAALGG--------------SEWIFRSC--KNIP----QPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ 369 (413)
T ss_dssp HHHSSCCCCTTGGGSC--------------SGGGGSSC--CCCC----HHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred HHHCCCCCCCcchhhh--------------HHHHHhhc--ccCC----HHHHHHHHHHccCChhhCcCHHHHHhCHHHHH
Confidence 9999999975432111 00111100 1112 35678888999999999999999999999876
Q ss_pred H
Q 003926 758 Q 758 (786)
Q Consensus 758 ~ 758 (786)
.
T Consensus 370 ~ 370 (413)
T 3dzo_A 370 L 370 (413)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-35 Score=344.75 Aligned_cols=243 Identities=16% Similarity=0.238 Sum_probs=189.6
Q ss_pred cCCCccCccCCCCCceeEEEEec--CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK--NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~--~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
++|...+.||+|+||.||+|+.. +|+.||||++..... ...+.|.+|++++++++|||||++++++..... ....
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~--~~~~ 157 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDR--HGDP 157 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECT--TSCE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCC--CCCc
Confidence 57888999999999999999975 689999999875432 234578999999999999999999999876321 1112
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..|+||||+++|+|.+++.. .++|.+++.++.|+++||.|||+. +||||||||+|||++.+ .+||+|||++
T Consensus 158 ~~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a 228 (681)
T 2pzi_A 158 VGYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAV 228 (681)
T ss_dssp EEEEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTC
T ss_pred eeEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccc
Confidence 36999999999999988753 589999999999999999999997 99999999999999986 8999999998
Q ss_pred cccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccccc
Q 003926 634 LLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVD 713 (786)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 713 (786)
+..... ....++..|+|||.+..+ ++.++|||||||++|||++|.+|+....... +..
T Consensus 229 ~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~------------------~~~ 286 (681)
T 2pzi_A 229 SRINSF---GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDG------------------LPE 286 (681)
T ss_dssp EETTCC---SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSS------------------CCT
T ss_pred hhcccC---CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccccc------------------ccc
Confidence 765432 344578899999988654 5899999999999999999998875421100 000
Q ss_pred ccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 714 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
. .........+.+++.+||+.||++||+..+.+.+.++.
T Consensus 287 ~----~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 287 D----DPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp T----CHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred c----ccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 0 00111234567888999999999999877777665543
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-34 Score=306.83 Aligned_cols=231 Identities=26% Similarity=0.380 Sum_probs=208.5
Q ss_pred CCCCEEEccCCCCcc--CCCccCCCCCCCCEEeccC-CCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCE
Q 003926 107 PDLKVLRLVSLGLWG--PLSGKISRLSSLEILNMSS-NFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAV 183 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g--~~~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 183 (786)
.+++.|+|++|++.| .+|..|.++++|++|+|++ |.+++.+|..|+++++|++|+|++|.+++.+|..|.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 578899999999999 8899999999999999995 9999999999999999999999999999999999999999999
Q ss_pred EEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCCC-cCCEEEcccCCCCCCCCccccchhhhhccCCccCC
Q 003926 184 LSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLT-YLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRS 261 (786)
Q Consensus 184 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~-~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~ 261 (786)
|+|++|.+++.+|..|.++++|++|+|++|++++.+|. +..++ +|++|+|++|. +++
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~---------------------l~~ 188 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNR---------------------LTG 188 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSE---------------------EEE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCe---------------------eec
Confidence 99999999999999999999999999999999987774 77776 77777776655 456
Q ss_pred cChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhc
Q 003926 262 AIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLA 341 (786)
Q Consensus 262 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~ 341 (786)
.+|..+..+. |+.|+|++|++++.+|..|..+++|+.|+|++|++++.+|. +..+++|+.|++++|+++|.+|..+..
T Consensus 189 ~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 266 (313)
T 1ogq_A 189 KIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQ 266 (313)
T ss_dssp ECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGG
T ss_pred cCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhc
Confidence 7778888887 99999999999999999999999999999999999988776 788999999999999999999999999
Q ss_pred CCCCcEEEcCCcccCCCCC
Q 003926 342 GSKNRVVLYARNCLAAGNE 360 (786)
Q Consensus 342 ~~~~~~~~~~~N~l~~~~~ 360 (786)
..+++.+++++|.++|..+
T Consensus 267 l~~L~~L~Ls~N~l~~~ip 285 (313)
T 1ogq_A 267 LKFLHSLNVSFNNLCGEIP 285 (313)
T ss_dssp CTTCCEEECCSSEEEEECC
T ss_pred CcCCCEEECcCCcccccCC
Confidence 9999999999999987433
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-34 Score=305.07 Aligned_cols=265 Identities=20% Similarity=0.228 Sum_probs=153.9
Q ss_pred CCHHHHHHHHHHHhcC-CCC-CCCCCC----CCCCCCCCCCCCCCccEEeC----------CCCEEEEEeCCCCCCCCCC
Q 003926 28 LQSSQAQTLLRIQGLL-NNP-AVLSSW----NITTEFCNTEPTSSLTVVCY----------EESITQLHIVGNKRAPMLP 91 (786)
Q Consensus 28 ~~~~~~~~ll~~k~~~-~~~-~~l~~W----~~~~~~C~w~~~~~~~v~c~----------~~~v~~l~l~~~~~~~~l~ 91 (786)
+..+|++||++||..+ .++ ..+.+| +...++|.|. |+.|. ..+|+.|+|+++.+. .+
T Consensus 24 ~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~-----g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~l- 96 (328)
T 4fcg_A 24 ALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRT-----GRALKATADLLEDATQPGRVALELRSVPLP-QF- 96 (328)
T ss_dssp CCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSH-----HHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SC-
T ss_pred cCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccC-----CcchhhhHHHHhcccccceeEEEccCCCch-hc-
Confidence 5578999999999987 455 345778 4457889887 58883 145666666665543 22
Q ss_pred CCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCC
Q 003926 92 LSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRV 171 (786)
Q Consensus 92 ~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 171 (786)
|..+.++++|++|+|++|.+. .+|..|+++++|++|+|++|.++ .+|..++++++|++|+|++|++.+.+
T Consensus 97 --------p~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~ 166 (328)
T 4fcg_A 97 --------PDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTEL 166 (328)
T ss_dssp --------CSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCC
T ss_pred --------ChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCcccc
Confidence 223445666666666666665 55556666666666666666665 55656666666666666666666666
Q ss_pred CcccCC---------CCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCC
Q 003926 172 PDWLGS---------LPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQF 242 (786)
Q Consensus 172 p~~~~~---------l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~ 242 (786)
|..+.. +++|++|+|++|.++ .+|..|+++++|+.|+|++|.+++.++.+..+++|++|+|++|++
T Consensus 167 p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~---- 241 (328)
T 4fcg_A 167 PEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTA---- 241 (328)
T ss_dssp CSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTT----
T ss_pred ChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcc----
Confidence 655443 555555555555555 445555555555555555555554444444444454444444433
Q ss_pred CccccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCC
Q 003926 243 PKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELG 322 (786)
Q Consensus 243 p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~ 322 (786)
.+.+|..+..+++|+.|+|++|++.+.+|..+.++++|+.|+|++|++.+.+|..+..+++|+
T Consensus 242 -----------------~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~ 304 (328)
T 4fcg_A 242 -----------------LRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANC 304 (328)
T ss_dssp -----------------CCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTC
T ss_pred -----------------hhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCce
Confidence 234444455555555555555555555555555555555555555555555555555555555
Q ss_pred EEeCcCCcC
Q 003926 323 FVDLSSNLL 331 (786)
Q Consensus 323 ~l~ls~N~l 331 (786)
.+++..|.+
T Consensus 305 ~l~l~~~~~ 313 (328)
T 4fcg_A 305 IILVPPHLQ 313 (328)
T ss_dssp EEECCGGGS
T ss_pred EEeCCHHHH
Confidence 555554444
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-32 Score=308.85 Aligned_cols=274 Identities=23% Similarity=0.228 Sum_probs=217.0
Q ss_pred CEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCC-CccCCCCCCCCEEeccCCCCCCCCCccccC
Q 003926 75 SITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPL-SGKISRLSSLEILNMSSNFLNGAIPQELSI 153 (786)
Q Consensus 75 ~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~-~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 153 (786)
+++.|+|++|.+.+..|. .+.++++|++|+|++|.+.+.+ +..|.++++|++|+|++|.+++..|..|++
T Consensus 31 ~l~~L~Ls~n~i~~~~~~---------~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 101 (455)
T 3v47_A 31 HVNYVDLSLNSIAELNET---------SFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNG 101 (455)
T ss_dssp TCCEEECCSSCCCEECTT---------TTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTT
T ss_pred ccCEEEecCCccCcCChh---------HhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccC
Confidence 588999999887765443 4557778888888888777555 456777888888888888887777777888
Q ss_pred CCCCcEEEcccccCCCCCCcc--cCCCCCCCEEEccCCcCcccCCcc-ccCCCCCCEEEccCCcCCcCCCC-CC------
Q 003926 154 LTSLQTLILDENMLAGRVPDW--LGSLPILAVLSLRNNMFNGTLPDS-FSYLENLRVLALSNNHFYGEVPD-FS------ 223 (786)
Q Consensus 154 l~~L~~L~L~~N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~-~~------ 223 (786)
+++|++|+|++|.+++.+|.. |..+++|++|+|++|.+++..|.. |.++++|++|+|++|.+++..+. +.
T Consensus 102 l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~ 181 (455)
T 3v47_A 102 LANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKH 181 (455)
T ss_dssp CTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCE
T ss_pred cccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccc
Confidence 888888888888877655544 777788888888888887776765 67778888888888877766553 22
Q ss_pred ----------------------------CCCcCCEEEcccCCCCCCCCcc------------------------------
Q 003926 224 ----------------------------GLTYLQVLDLENNALGPQFPKV------------------------------ 245 (786)
Q Consensus 224 ----------------------------~l~~L~~L~L~~N~l~~~~p~~------------------------------ 245 (786)
.+++|+.|+|++|.+++..|..
T Consensus 182 L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~ 261 (455)
T 3v47_A 182 FTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNF 261 (455)
T ss_dssp EEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSS
T ss_pred ccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhh
Confidence 3367888888888775432210
Q ss_pred ------------ccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCc
Q 003926 246 ------------GKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFD 313 (786)
Q Consensus 246 ------------~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~ 313 (786)
..+|+.|++++|.+++.+|..+..+++|+.|+|++|++.+..|..|.++++|+.|+|++|++++..|.
T Consensus 262 ~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 341 (455)
T 3v47_A 262 KDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSR 341 (455)
T ss_dssp CCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGG
T ss_pred ccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChh
Confidence 13688888999999888898999999999999999999988888999999999999999999888888
Q ss_pred cCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 314 DLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 314 ~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
.+..+++|+.|+|++|++++..|..+..+.+++.+++++|.+++
T Consensus 342 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 385 (455)
T 3v47_A 342 MFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKS 385 (455)
T ss_dssp GGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred HhcCcccCCEEECCCCcccccChhhccccccccEEECCCCcccc
Confidence 88899999999999999998888888888899999999998876
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=305.08 Aligned_cols=253 Identities=14% Similarity=0.119 Sum_probs=186.8
Q ss_pred cCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCC--------CChHHHHHHHHHHhcCC---------CCCcceee
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKC--------HSTRNFMHHIELISKLR---------HRHLVSAL 539 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~--------~~~~~f~~E~~~l~~l~---------H~NIv~l~ 539 (786)
++|+..+.||+|+||+||+|+. +|+.||||++..... ...+.+.+|++++++++ |||||++.
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~ 98 (336)
T 2vuw_A 20 EKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN 98 (336)
T ss_dssp HHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred ccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence 4567789999999999999998 689999999986532 22378999999999886 77777777
Q ss_pred eeeeecc-------------cc----------CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHh
Q 003926 540 GHCFECY-------------FD----------DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGI 596 (786)
Q Consensus 540 g~~~~~~-------------~~----------~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL 596 (786)
+.+.... .. ....+..|+|||||++|++.+.+.+ ..+++.....++.|++.||
T Consensus 99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~aL 174 (336)
T 2vuw_A 99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTASL 174 (336)
T ss_dssp EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHHH
T ss_pred ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHHH
Confidence 6543110 00 0014578999999999987776643 3589999999999999999
Q ss_pred hhhh-cCCCCCccccCCCCCceeecCCC--------------------cccccCCCcccccccccccccccccccccCcc
Q 003926 597 QFLH-TGIVPGVFSNNLKITDILLDQNL--------------------VAKISSYNLPLLAENAEKVGHVIPYSGSIDPT 655 (786)
Q Consensus 597 ~yLH-~~~~~~ivHrdlk~~NILld~~~--------------------~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe 655 (786)
+||| +. +|+||||||+|||++.++ .+||+|||+++..... ...++..|+|||
T Consensus 175 ~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~----~~~gt~~y~aPE 247 (336)
T 2vuw_A 175 AVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG----IVVFCDVSMDED 247 (336)
T ss_dssp HHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT----EEECCCCTTCSG
T ss_pred HHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC----cEEEeecccChh
Confidence 9999 76 999999999999999887 8999999999765432 346788899999
Q ss_pred ccccCCCCcccceeehhHH-HHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHH
Q 003926 656 NSARGKLEEKIDIYDFGLI-LLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVR 734 (786)
Q Consensus 656 ~~~~~~~t~ksDVwSfGvv-l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~ 734 (786)
.+.+.. +.++||||+|++ .+++++|..||..... ............ . ...............++.+++.+
T Consensus 248 ~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~--~~~~~~~~~~~~--~----~~~~~~~~~~~~~s~~~~dli~~ 318 (336)
T 2vuw_A 248 LFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLW--LHYLTDKMLKQM--T----FKTKCNTPAMKQIKRKIQEFHRT 318 (336)
T ss_dssp GGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHH--HHHHHHHHHHTC--C----CSSCCCSHHHHHHHHHHHHHHHH
T ss_pred hhcCCC-ccceehhhhhCCCCcccccccCCCcchhh--hhHHHHhhhhhh--c----cCcccchhhhhhcCHHHHHHHHH
Confidence 987554 899999998777 7888999998843211 000111111100 0 00111111234556778899999
Q ss_pred hccCCCCCCCCHHHHH-HHHHH
Q 003926 735 CLLKNPAERPSVEDVL-WNLQF 755 (786)
Q Consensus 735 Cl~~dP~~RPt~~evl-~~l~~ 755 (786)
||+.| |+.|++ +|+||
T Consensus 319 ~L~~d-----sa~e~l~~Hp~f 335 (336)
T 2vuw_A 319 MLNFS-----SATDLLCQHSLF 335 (336)
T ss_dssp GGGSS-----SHHHHHHHCGGG
T ss_pred HhccC-----CHHHHHhcCCCc
Confidence 99976 999999 89886
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-31 Score=301.88 Aligned_cols=274 Identities=19% Similarity=0.119 Sum_probs=204.0
Q ss_pred CEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCC
Q 003926 75 SITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSIL 154 (786)
Q Consensus 75 ~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 154 (786)
.++.|+|++|.+.+..+. .+.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..|.++
T Consensus 33 ~l~~L~L~~n~l~~~~~~---------~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 103 (477)
T 2id5_A 33 ETRLLDLGKNRIKTLNQD---------EFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGL 103 (477)
T ss_dssp TCSEEECCSSCCCEECTT---------TTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTC
T ss_pred CCcEEECCCCccceECHh---------HccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCC
Confidence 567788888776654443 45678888888888888888888888888888888888888887766777888
Q ss_pred CCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCCCcCCEEEc
Q 003926 155 TSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDL 233 (786)
Q Consensus 155 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L 233 (786)
++|++|+|++|.+++..|..|..+++|+.|+|++|.+.+..|..|.++++|+.|+|++|.+++..+. |..+++|+.|+|
T Consensus 104 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l 183 (477)
T 2id5_A 104 SNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRL 183 (477)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEE
T ss_pred CCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeC
Confidence 8888888888888888888888888888888888888887788888888888888888888765553 777788888888
Q ss_pred ccCCCCCCCCcc---ccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcc
Q 003926 234 ENNALGPQFPKV---GKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGK 310 (786)
Q Consensus 234 ~~N~l~~~~p~~---~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ 310 (786)
++|.+.+..+.. .++|+.|++++|.+.+.+|..+....+|+.|+|++|++++..+..+.++++|+.|+|++|++++.
T Consensus 184 ~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 263 (477)
T 2id5_A 184 RHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTI 263 (477)
T ss_dssp ESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEE
T ss_pred CCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCcc
Confidence 888776654432 35667777777766666666655555677777777777655445667777777777777777766
Q ss_pred cCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 311 LFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 311 ~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
.+..+..+++|+.|+|++|++++..|..+..+.+++.+++++|.+++
T Consensus 264 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 310 (477)
T 2id5_A 264 EGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTT 310 (477)
T ss_dssp CTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSC
T ss_pred ChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCce
Confidence 66666667777777777777776666666666667777777776654
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.8e-31 Score=304.59 Aligned_cols=249 Identities=22% Similarity=0.223 Sum_probs=215.8
Q ss_pred cCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCC
Q 003926 103 LVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILA 182 (786)
Q Consensus 103 l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 182 (786)
+.++++|++|+|++|.+.+..|..|+++++|+.|+|++|.+++..|..|+++++|++|+|++|.+++..+..|+++++|+
T Consensus 71 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~ 150 (597)
T 3oja_B 71 LDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLT 150 (597)
T ss_dssp HHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred HccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCC
Confidence 56789999999999999999888999999999999999999998888899999999999999999976667789999999
Q ss_pred EEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCc-------------------CCEEEcccCCCCCCCC
Q 003926 183 VLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTY-------------------LQVLDLENNALGPQFP 243 (786)
Q Consensus 183 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~-------------------L~~L~L~~N~l~~~~p 243 (786)
+|+|++|.+++..|..|+++++|+.|+|++|.+++.. +..+++ |+.|++++|.++...+
T Consensus 151 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~ 228 (597)
T 3oja_B 151 TLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD--LSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRG 228 (597)
T ss_dssp EEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC--GGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEEC
T ss_pred EEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC--hhhhhhhhhhhcccCccccccCCchhheeeccCCccccccc
Confidence 9999999999988888999999999999999998753 233344 5555555555544444
Q ss_pred ccccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCE
Q 003926 244 KVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGF 323 (786)
Q Consensus 244 ~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~ 323 (786)
....+|+.|+|++|.+++ +..+..+++|+.|+|++|.+.+.+|..|..+++|+.|+|++|++++ +|..+..+++|+.
T Consensus 229 ~~~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~ 305 (597)
T 3oja_B 229 PVNVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKV 305 (597)
T ss_dssp SCCSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCE
T ss_pred ccCCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcE
Confidence 445679999999999987 3678999999999999999999999999999999999999999997 4667778999999
Q ss_pred EeCcCCcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 324 VDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 324 l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
|+|++|.++ .+|..+..+..+..+++++|.+.+
T Consensus 306 L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~ 338 (597)
T 3oja_B 306 LDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVT 338 (597)
T ss_dssp EECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCC
T ss_pred EECCCCCCC-ccCcccccCCCCCEEECCCCCCCC
Confidence 999999999 688888888999999999999876
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-30 Score=291.16 Aligned_cols=252 Identities=21% Similarity=0.206 Sum_probs=229.1
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCC-CccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEE
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAI-PQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLS 185 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 185 (786)
++|++|+|++|.+++..|..|+++++|++|+|++|.+.+.+ |..|.++++|++|+|++|++++..|..|+++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 68999999999999999999999999999999999998666 56799999999999999999999999999999999999
Q ss_pred ccCCcCcccCCcc--ccCCCCCCEEEccCCcCCcCCCC--CCCCCcCCEEEcccCCCCCCCCccc---------------
Q 003926 186 LRNNMFNGTLPDS--FSYLENLRVLALSNNHFYGEVPD--FSGLTYLQVLDLENNALGPQFPKVG--------------- 246 (786)
Q Consensus 186 Ls~N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~~~~p~--~~~l~~L~~L~L~~N~l~~~~p~~~--------------- 246 (786)
|++|.+++.+|.. |.++++|++|+|++|.+++..|. +.++++|++|+|++|.+++..+...
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 9999999866655 99999999999999999998776 8899999999999999987766422
Q ss_pred ----------------------cchhhhhccCCccCCcChhhhcCc----------------------------------
Q 003926 247 ----------------------KKLVTMILSKNKFRSAIPAEVSSY---------------------------------- 270 (786)
Q Consensus 247 ----------------------~~L~~L~ls~N~l~~~~p~~~~~l---------------------------------- 270 (786)
++|+.|++++|++++.+|..+...
T Consensus 190 n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~ 269 (455)
T 3v47_A 190 ITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTF 269 (455)
T ss_dssp CBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTT
T ss_pred CcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCccccc
Confidence 468889999999888777655322
Q ss_pred -----cccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCC
Q 003926 271 -----YQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKN 345 (786)
Q Consensus 271 -----~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~ 345 (786)
++|+.|+|++|++.+.+|..+..+++|+.|+|++|++++..|..+..+++|+.|+|++|.+++..|..+..+.++
T Consensus 270 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 349 (455)
T 3v47_A 270 KGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKL 349 (455)
T ss_dssp GGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTC
T ss_pred ccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccC
Confidence 579999999999999999999999999999999999999999999999999999999999999889999999999
Q ss_pred cEEEcCCcccCCC
Q 003926 346 RVVLYARNCLAAG 358 (786)
Q Consensus 346 ~~~~~~~N~l~~~ 358 (786)
+.+++++|.+.+.
T Consensus 350 ~~L~Ls~N~l~~~ 362 (455)
T 3v47_A 350 EVLDLSYNHIRAL 362 (455)
T ss_dssp CEEECCSSCCCEE
T ss_pred CEEECCCCccccc
Confidence 9999999998763
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.8e-30 Score=283.74 Aligned_cols=249 Identities=22% Similarity=0.224 Sum_probs=211.3
Q ss_pred cCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCC
Q 003926 103 LVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILA 182 (786)
Q Consensus 103 l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 182 (786)
+.++++|++|+|++|.+.+..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.++...+..|.++++|+
T Consensus 65 ~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~ 144 (390)
T 3o6n_A 65 LDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLT 144 (390)
T ss_dssp HHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred hcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCc
Confidence 56789999999999999988888999999999999999999988888899999999999999999865555679999999
Q ss_pred EEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCc-------------------CCEEEcccCCCCCCCC
Q 003926 183 VLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTY-------------------LQVLDLENNALGPQFP 243 (786)
Q Consensus 183 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~-------------------L~~L~L~~N~l~~~~p 243 (786)
+|+|++|.+++..|..|.++++|+.|++++|.+++.. +..+++ |+.|++++|.+.....
T Consensus 145 ~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~ 222 (390)
T 3o6n_A 145 TLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD--LSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRG 222 (390)
T ss_dssp EEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC--GGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEEC
T ss_pred EEECCCCccCccChhhccCCCCCCEEECCCCcCCccc--cccccccceeecccccccccCCCCcceEEECCCCeeeeccc
Confidence 9999999999888888999999999999999988642 333344 5555555555544433
Q ss_pred ccccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCE
Q 003926 244 KVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGF 323 (786)
Q Consensus 244 ~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~ 323 (786)
....+|+.|++++|.+++. ..+..+++|+.|+|++|.+.+..|..|..+++|+.|+|++|++++ +|..+..+++|+.
T Consensus 223 ~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~ 299 (390)
T 3o6n_A 223 PVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKV 299 (390)
T ss_dssp CCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCE
T ss_pred cccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCE
Confidence 3446789999999999874 578899999999999999999889999999999999999999987 4566678899999
Q ss_pred EeCcCCcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 324 VDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 324 l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
|++++|+++ .+|..+..+.+++.+++++|.+..
T Consensus 300 L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~ 332 (390)
T 3o6n_A 300 LDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVT 332 (390)
T ss_dssp EECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCC
T ss_pred EECCCCcce-ecCccccccCcCCEEECCCCccce
Confidence 999999998 567777888899999999999875
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.6e-31 Score=306.93 Aligned_cols=280 Identities=19% Similarity=0.210 Sum_probs=241.4
Q ss_pred CCCEEEEEeCCCCCCCC-CCCCCcCC-------ccccccC--CCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCC
Q 003926 73 EESITQLHIVGNKRAPM-LPLSFSMD-------SFVTTLV--KLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNF 142 (786)
Q Consensus 73 ~~~v~~l~l~~~~~~~~-l~~~~~~~-------~~~~~l~--~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~ 142 (786)
-.+++.|+|++|.+++. ++..+... .+|..++ ++++|++|+|++|.+.|.+|..|+++++|++|+|++|+
T Consensus 205 l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~ 284 (636)
T 4eco_A 205 LTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNR 284 (636)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCT
T ss_pred ccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCC
Confidence 35789999999998873 22222111 1667888 99999999999999999999999999999999999998
Q ss_pred -CCC-CCCccccCC------CCCcEEEcccccCCCCCCc--ccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccC
Q 003926 143 -LNG-AIPQELSIL------TSLQTLILDENMLAGRVPD--WLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSN 212 (786)
Q Consensus 143 -l~~-~~p~~~~~l------~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 212 (786)
++| .+|..++++ ++|++|+|++|+++ .+|. .|+++++|++|+|++|.++|.+| .|+++++|+.|+|++
T Consensus 285 ~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~ 362 (636)
T 4eco_A 285 GISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAY 362 (636)
T ss_dssp TSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCS
T ss_pred CCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCC
Confidence 998 899998887 99999999999999 8998 99999999999999999999999 999999999999999
Q ss_pred CcCCcCCCCCCCCCc-CCEEEcccCCCCCCCCccc-----cchhhhhccCCccCCcChhhhc-------Cccccceeecc
Q 003926 213 NHFYGEVPDFSGLTY-LQVLDLENNALGPQFPKVG-----KKLVTMILSKNKFRSAIPAEVS-------SYYQLQRLDLS 279 (786)
Q Consensus 213 N~l~~~~p~~~~l~~-L~~L~L~~N~l~~~~p~~~-----~~L~~L~ls~N~l~~~~p~~~~-------~l~~L~~L~Ls 279 (786)
|+++..+..+..+++ |++|+|++|.++ .+|... .+|+.|++++|.+++.+|..+. .+.+|+.|+|+
T Consensus 363 N~l~~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls 441 (636)
T 4eco_A 363 NQITEIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLS 441 (636)
T ss_dssp SEEEECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECC
T ss_pred CccccccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECc
Confidence 999954446999999 999999999998 566542 3799999999999999999888 78899999999
Q ss_pred CccccCCCchhhCCCCCCcEEEeecCCCCcccCccC-CCC-------CCCCEEeCcCCcCCccCChhhh--cCCCCcEEE
Q 003926 280 SNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDL-SCN-------PELGFVDLSSNLLTGQLPNCLL--AGSKNRVVL 349 (786)
Q Consensus 280 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~-~~~-------~~L~~l~ls~N~l~g~~p~~~~--~~~~~~~~~ 349 (786)
+|++++..+..+..+++|+.|+|++|+++ .+|... ... ++|+.|+|++|+++ .+|..+. .+.+++.++
T Consensus 442 ~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~ 519 (636)
T 4eco_A 442 NNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGID 519 (636)
T ss_dssp SSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEE
T ss_pred CCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEE
Confidence 99999554455667999999999999999 555443 322 28999999999999 7888887 888999999
Q ss_pred cCCcccCC
Q 003926 350 YARNCLAA 357 (786)
Q Consensus 350 ~~~N~l~~ 357 (786)
+++|.+++
T Consensus 520 Ls~N~l~~ 527 (636)
T 4eco_A 520 LSYNSFSK 527 (636)
T ss_dssp CCSSCCSS
T ss_pred CCCCCCCC
Confidence 99999886
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-29 Score=296.54 Aligned_cols=282 Identities=21% Similarity=0.213 Sum_probs=189.8
Q ss_pred CEEEEEeCCCCCCCCCCCCCc-----------CC---cc-ccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEecc
Q 003926 75 SITQLHIVGNKRAPMLPLSFS-----------MD---SF-VTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMS 139 (786)
Q Consensus 75 ~v~~l~l~~~~~~~~l~~~~~-----------~~---~~-~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls 139 (786)
+++.|++++|.+.+..+..|. .+ .+ +..+.++++|++|+|++|.+.+..|..|+++++|++|+|+
T Consensus 33 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~ 112 (606)
T 3vq2_A 33 STKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAV 112 (606)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECT
T ss_pred CcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEcc
Confidence 688999999987765553221 11 12 3456777788888888888877777778888888888888
Q ss_pred CCCCCCCCCccccCCCCCcEEEcccccCCC-CCCcccCCCCCCCEEEccCCcCcccCCccccCCC---------------
Q 003926 140 SNFLNGAIPQELSILTSLQTLILDENMLAG-RVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLE--------------- 203 (786)
Q Consensus 140 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--------------- 203 (786)
+|.+++..|..++++++|++|+|++|.+++ .+|..|+++++|++|+|++|.+++..|..|+.++
T Consensus 113 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~ 192 (606)
T 3vq2_A 113 ETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNP 192 (606)
T ss_dssp TSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCC
T ss_pred CCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCC
Confidence 888877776777888888888888888765 5677788888888888888777765554332222
Q ss_pred --------------------------------------------------------------------------------
Q 003926 204 -------------------------------------------------------------------------------- 203 (786)
Q Consensus 204 -------------------------------------------------------------------------------- 203 (786)
T Consensus 193 l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~ 272 (606)
T 3vq2_A 193 IDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTN 272 (606)
T ss_dssp CCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCT
T ss_pred cceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccc
Confidence
Q ss_pred -----------------------------------CCCEEEccCCcCCcCCCC---------------------CCCCCc
Q 003926 204 -----------------------------------NLRVLALSNNHFYGEVPD---------------------FSGLTY 227 (786)
Q Consensus 204 -----------------------------------~L~~L~Ls~N~l~~~~p~---------------------~~~l~~ 227 (786)
+|+.|++++|.+ +.+|. +..+++
T Consensus 273 ~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l-~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~~ 351 (606)
T 3vq2_A 273 DFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQL-KQFPTLDLPFLKSLTLTMNKGSISFKKVALPS 351 (606)
T ss_dssp TCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCC-SSCCCCCCSSCCEEEEESCSSCEECCCCCCTT
T ss_pred cccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccC-cccccCCCCccceeeccCCcCccchhhccCCC
Confidence 122222222222 11111 112233
Q ss_pred CCEEEcccCCCCCCC--C-----------------------c---cccchhhhhccCCccCCcCh-hhhcCccccceeec
Q 003926 228 LQVLDLENNALGPQF--P-----------------------K---VGKKLVTMILSKNKFRSAIP-AEVSSYYQLQRLDL 278 (786)
Q Consensus 228 L~~L~L~~N~l~~~~--p-----------------------~---~~~~L~~L~ls~N~l~~~~p-~~~~~l~~L~~L~L 278 (786)
|++|++++|.+++.. | . ..++|+.|++++|++++..| ..+.++++|+.|+|
T Consensus 352 L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l 431 (606)
T 3vq2_A 352 LSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDI 431 (606)
T ss_dssp CCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEEECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEEC
T ss_pred CCEEECcCCccCCCcchhhhhccCCcccEeECCCCccccchhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEEC
Confidence 444444444332210 1 0 12456677777777777766 57778888888888
Q ss_pred cCccccCCCchhhCCCCCCcEEEeecCCCCc-ccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 279 SSNRFVGPFPQALLSLPSITYLNIADNKLTG-KLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 279 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g-~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
++|++.+..|..+..+++|+.|++++|++++ .+|..+..+++|+.|++++|++++..|..+..+.+++.+++++|.+++
T Consensus 432 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 511 (606)
T 3vq2_A 432 SYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLF 511 (606)
T ss_dssp TTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred cCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCC
Confidence 8888888788888888888888888888877 367777788888888888888887777777777788888888887765
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-29 Score=296.36 Aligned_cols=272 Identities=21% Similarity=0.162 Sum_probs=208.9
Q ss_pred CEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCC
Q 003926 75 SITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSIL 154 (786)
Q Consensus 75 ~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 154 (786)
+++.|+++++.+.+..+. .+.++++|++|+|++|.++ .+|..+.++++|++|+|++|.+++..|..+.++
T Consensus 255 ~L~~L~l~~n~l~~~~~~---------~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l 324 (606)
T 3t6q_A 255 SVESINLQKHYFFNISSN---------TFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNF 324 (606)
T ss_dssp EEEEEECTTCCCSSCCTT---------TTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGC
T ss_pred ceeEEEeecCccCccCHH---------HhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhcc
Confidence 688889988877654443 3557788888888888876 567777888888888888888887777778888
Q ss_pred CCCcEEEcccccCCCCCCc-ccCCCCCCCEEEccCCcCcccC--CccccCCCCCCEEEccCCcCCcCCCC-CCCCCcCCE
Q 003926 155 TSLQTLILDENMLAGRVPD-WLGSLPILAVLSLRNNMFNGTL--PDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQV 230 (786)
Q Consensus 155 ~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~ 230 (786)
++|++|++++|.+.+.+|. .+..+++|++|++++|.+++.. |..+.++++|+.|++++|.+++..|. |..+++|+.
T Consensus 325 ~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 404 (606)
T 3t6q_A 325 PSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLEL 404 (606)
T ss_dssp TTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSE
T ss_pred CcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCe
Confidence 8888888888887766664 4778888888888888887665 66778888888888888888776664 777788888
Q ss_pred EEcccCCCCCCCCcc----ccchhhhhccCCccCCcChhhhcCccccceeeccCccccCC---CchhhCCCCCCcEEEee
Q 003926 231 LDLENNALGPQFPKV----GKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGP---FPQALLSLPSITYLNIA 303 (786)
Q Consensus 231 L~L~~N~l~~~~p~~----~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~l~ 303 (786)
|++++|.+.+..+.. .++|+.|++++|.+++..|..+..+++|+.|+|++|++.+. .+..+..+++|+.|+++
T Consensus 405 L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls 484 (606)
T 3t6q_A 405 LDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLS 484 (606)
T ss_dssp EECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECT
T ss_pred EECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECC
Confidence 888888877665432 36778888888888877777788888888888888887762 33567778888888888
Q ss_pred cCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 304 DNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 304 ~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
+|++++..|..+..+++|+.|+|++|++++..|..+.....+ .+++++|.+++
T Consensus 485 ~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~ 537 (606)
T 3t6q_A 485 FCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISI 537 (606)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCC
T ss_pred CCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccc
Confidence 888887777778888888888888888888777777777777 78888887775
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-29 Score=294.17 Aligned_cols=302 Identities=24% Similarity=0.271 Sum_probs=213.7
Q ss_pred CCCCCCCCC----CCCCCCCCCCccEEeCC-----------CCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEE
Q 003926 48 VLSSWNITT----EFCNTEPTSSLTVVCYE-----------ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVL 112 (786)
Q Consensus 48 ~l~~W~~~~----~~C~w~~~~~~~v~c~~-----------~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L 112 (786)
.+++|+.+. ++|.+. .....|.|.. ..++.|+|++|.++...+. .|.++++|++|
T Consensus 12 ~~~~~~~~~p~~~~~c~~~-~~~~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~---------~f~~l~~L~~L 81 (635)
T 4g8a_A 12 KLAAANSSIPESWEPCVEV-VPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSY---------SFFSFPELQVL 81 (635)
T ss_dssp -------------CCSEEE-ETTTEEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTT---------TTTTCTTCCEE
T ss_pred hhhcccCCCCCCCCCcccc-CCCCEEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHH---------HHhCCCCCCEE
Confidence 566675432 234332 1234688953 2578999999987755443 45678888888
Q ss_pred EccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCc
Q 003926 113 RLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFN 192 (786)
Q Consensus 113 ~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 192 (786)
+|++|++++..|++|.+|++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..|+++++|++|+|++|.++
T Consensus 82 ~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~ 161 (635)
T 4g8a_A 82 DLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQ 161 (635)
T ss_dssp ECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccc
Confidence 88888888877788888888888888888888777777888888888888888888776677888888888888888876
Q ss_pred c-cCCccccCCCCCCEEEccCCcCCcCCCC-C------------------------------------------------
Q 003926 193 G-TLPDSFSYLENLRVLALSNNHFYGEVPD-F------------------------------------------------ 222 (786)
Q Consensus 193 ~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~------------------------------------------------ 222 (786)
+ .+|..++++++|++|+|++|++++..+. |
T Consensus 162 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~ 241 (635)
T 4g8a_A 162 SFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVM 241 (635)
T ss_dssp CCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSSHHHH
T ss_pred cCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhccccccccc
Confidence 5 3567777888888888887776442110 0
Q ss_pred --------------------------------------------------------------------------------
Q 003926 223 -------------------------------------------------------------------------------- 222 (786)
Q Consensus 223 -------------------------------------------------------------------------------- 222 (786)
T Consensus 242 ~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~ 321 (635)
T 4g8a_A 242 KTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERV 321 (635)
T ss_dssp HHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEEC
T ss_pred chhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccccc
Confidence
Q ss_pred ----------------------------------------------CCCCcCCEEEcccCCCCCC--CC-----------
Q 003926 223 ----------------------------------------------SGLTYLQVLDLENNALGPQ--FP----------- 243 (786)
Q Consensus 223 ----------------------------------------------~~l~~L~~L~L~~N~l~~~--~p----------- 243 (786)
..+++|+.|++++|.+... .+
T Consensus 322 ~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~ 401 (635)
T 4g8a_A 322 KDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKY 401 (635)
T ss_dssp GGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCE
T ss_pred cccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccccccchhhccccccccccccchhhhhhhhh
Confidence 0122334444444433100 00
Q ss_pred ----------------------------------------ccccchhhhhccCCccCCcChhhhcCccccceeeccCccc
Q 003926 244 ----------------------------------------KVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRF 283 (786)
Q Consensus 244 ----------------------------------------~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 283 (786)
....++..++++.|.+.+..|..+..++.|+.|+|++|++
T Consensus 402 L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~ 481 (635)
T 4g8a_A 402 LDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSF 481 (635)
T ss_dssp EECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEE
T ss_pred hhccccccccccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhccc
Confidence 0012345566777888888888888888899999998875
Q ss_pred -cCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCCCC
Q 003926 284 -VGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAAGN 359 (786)
Q Consensus 284 -~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~~~ 359 (786)
.+.+|..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..|..+..+++++.+++++|.+++..
T Consensus 482 ~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~ 558 (635)
T 4g8a_A 482 QENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSK 558 (635)
T ss_dssp GGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCC
T ss_pred ccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCC
Confidence 4457788888899999999999999888888888899999999999998888888888888889999999888743
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.3e-29 Score=303.25 Aligned_cols=285 Identities=19% Similarity=0.186 Sum_probs=212.3
Q ss_pred CCCEEEEEeCCCCCCCCCCCCCc---------------CCcc-ccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEE
Q 003926 73 EESITQLHIVGNKRAPMLPLSFS---------------MDSF-VTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEIL 136 (786)
Q Consensus 73 ~~~v~~l~l~~~~~~~~l~~~~~---------------~~~~-~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L 136 (786)
..+++.|+|++|.+++..|..|. ...+ +..+.++++|++|+|++|.+.+..|..|+++++|++|
T Consensus 23 p~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 102 (844)
T 3j0a_A 23 LNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFEL 102 (844)
T ss_dssp CTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCE
T ss_pred CCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEe
Confidence 35788999999887765554321 1122 3456666777777777777766666667777777777
Q ss_pred eccCCCCCCCCCcc--ccCCCCCcEEEcccccCCCCCC-cccCCCCCCCEEEccCCcCcccCCccccCC--CCCCEEEcc
Q 003926 137 NMSSNFLNGAIPQE--LSILTSLQTLILDENMLAGRVP-DWLGSLPILAVLSLRNNMFNGTLPDSFSYL--ENLRVLALS 211 (786)
Q Consensus 137 ~Ls~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l--~~L~~L~Ls 211 (786)
+|++|.+++.+|.. |.++++|++|+|++|.+++..| ..|+++++|++|+|++|.+++..|..|..+ ++|+.|+|+
T Consensus 103 ~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~ 182 (844)
T 3j0a_A 103 RLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLA 182 (844)
T ss_dssp ECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEEC
T ss_pred eCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECC
Confidence 77777776655544 6667777777777777665544 456677777777777777766666666665 667777777
Q ss_pred CCcCCcCCCC-CCCCCc------CCEEEcccCCCCCCCCcc---------------------------------------
Q 003926 212 NNHFYGEVPD-FSGLTY------LQVLDLENNALGPQFPKV--------------------------------------- 245 (786)
Q Consensus 212 ~N~l~~~~p~-~~~l~~------L~~L~L~~N~l~~~~p~~--------------------------------------- 245 (786)
+|.+++..|. +..+.+ |+.|+|++|.+++..+..
T Consensus 183 ~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~ 262 (844)
T 3j0a_A 183 ANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAG 262 (844)
T ss_dssp CSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTT
T ss_pred CCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhc
Confidence 7766665543 444433 888888888776544421
Q ss_pred --ccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCE
Q 003926 246 --GKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGF 323 (786)
Q Consensus 246 --~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~ 323 (786)
..+|+.|++++|.+.+..|..|..+++|+.|+|++|++.+..|..|..+++|+.|+|++|++++..|..+..+++|+.
T Consensus 263 l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 342 (844)
T 3j0a_A 263 LARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAY 342 (844)
T ss_dssp TTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCE
T ss_pred cccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCE
Confidence 146788899999998888888999999999999999999888889999999999999999999888889999999999
Q ss_pred EeCcCCcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 324 VDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 324 l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
|++++|.+++..+..+..+.+++.+++++|.+++
T Consensus 343 L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~ 376 (844)
T 3j0a_A 343 IDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT 376 (844)
T ss_dssp EECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC
T ss_pred EECCCCCCCccChhhhcCCCCCCEEECCCCCCCc
Confidence 9999999988777778888899999999998875
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-29 Score=294.36 Aligned_cols=273 Identities=20% Similarity=0.153 Sum_probs=224.5
Q ss_pred CEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCC
Q 003926 75 SITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSIL 154 (786)
Q Consensus 75 ~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 154 (786)
.++.|++++|.+++..|. .+.++++|++|+|++|.+.+..|..|+++++|++|+|++|.+++..|..|+++
T Consensus 34 ~l~~L~Ls~n~i~~~~~~---------~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 104 (606)
T 3t6q_A 34 STECLEFSFNVLPTIQNT---------TFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGP 104 (606)
T ss_dssp TCCEEECTTCCCSEECTT---------TSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSC
T ss_pred cCcEEEccCCccCcCChh---------HhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhccc
Confidence 578888888887755443 56688999999999999998889999999999999999999998888899999
Q ss_pred CCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCCCcCC--EE
Q 003926 155 TSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQ--VL 231 (786)
Q Consensus 155 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~--~L 231 (786)
++|++|+|++|.+++..|..|+++++|++|+|++|.+++..++.+..+++|+.|++++|.+++..|. |..+++|+ .|
T Consensus 105 ~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L 184 (606)
T 3t6q_A 105 KALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSL 184 (606)
T ss_dssp TTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEE
T ss_pred ccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEE
Confidence 9999999999999877778889999999999999999875444555589999999999999877664 77888888 88
Q ss_pred EcccCCCCCCCCcccc------------------------------------------------------chhhhhccCC
Q 003926 232 DLENNALGPQFPKVGK------------------------------------------------------KLVTMILSKN 257 (786)
Q Consensus 232 ~L~~N~l~~~~p~~~~------------------------------------------------------~L~~L~ls~N 257 (786)
++++|.+.+..|.... +|+.|++++|
T Consensus 185 ~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n 264 (606)
T 3t6q_A 185 NLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKH 264 (606)
T ss_dssp ECTTCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTC
T ss_pred ecCCCccCccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecC
Confidence 8999988765553211 5677788888
Q ss_pred ccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCCh
Q 003926 258 KFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPN 337 (786)
Q Consensus 258 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~ 337 (786)
.+++..+..|.++++|++|+|++|+++ .+|..+..+++|++|++++|++++..|..+..+++|+.|++++|.+.+.+|.
T Consensus 265 ~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~ 343 (606)
T 3t6q_A 265 YFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGT 343 (606)
T ss_dssp CCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCS
T ss_pred ccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccch
Confidence 888877777888888888888888887 6777888888888888888888888788888888888888888888877766
Q ss_pred h-hhcCCCCcEEEcCCcccCC
Q 003926 338 C-LLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 338 ~-~~~~~~~~~~~~~~N~l~~ 357 (786)
. +..+.+++.+++++|.+.+
T Consensus 344 ~~~~~l~~L~~L~l~~n~l~~ 364 (606)
T 3t6q_A 344 GCLENLENLRELDLSHDDIET 364 (606)
T ss_dssp STTTTCTTCCEEECCSSCCCE
T ss_pred hhhhccCcCCEEECCCCcccc
Confidence 4 6677788888888887765
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-28 Score=264.40 Aligned_cols=246 Identities=21% Similarity=0.247 Sum_probs=219.0
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEc
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 186 (786)
++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+++ .+|..+. ++|+.|++
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l 128 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRV 128 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEEC
Confidence 67899999999999998889999999999999999999998999999999999999999998 5666554 79999999
Q ss_pred cCCcCcccCCccccCCCCCCEEEccCCcCCc--CCC-CCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcC
Q 003926 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYG--EVP-DFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAI 263 (786)
Q Consensus 187 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p-~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~ 263 (786)
++|.+++..+..|.++++|+.|++++|.++. ..+ .+.++++|++|++++|.++.......++|+.|++++|.+++..
T Consensus 129 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~l~~~~ 208 (330)
T 1xku_A 129 HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVD 208 (330)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCCTTCSEEECTTSCCCEEC
T ss_pred CCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccCCccccccCCEEECCCCcCCccC
Confidence 9999998888889999999999999999964 444 4889999999999999998765555689999999999999999
Q ss_pred hhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhc--
Q 003926 264 PAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLA-- 341 (786)
Q Consensus 264 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~-- 341 (786)
|..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|+++ .+|..+..+++|+.|++++|++++..+..+..
T Consensus 209 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~ 287 (330)
T 1xku_A 209 AASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPG 287 (330)
T ss_dssp TGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSS
T ss_pred HHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcc
Confidence 999999999999999999999988889999999999999999999 77888999999999999999999766555532
Q ss_pred ----CCCCcEEEcCCcccC
Q 003926 342 ----GSKNRVVLYARNCLA 356 (786)
Q Consensus 342 ----~~~~~~~~~~~N~l~ 356 (786)
...+..+.+.+|.+.
T Consensus 288 ~~~~~~~l~~l~l~~N~~~ 306 (330)
T 1xku_A 288 YNTKKASYSGVSLFSNPVQ 306 (330)
T ss_dssp CCTTSCCCSEEECCSSSSC
T ss_pred cccccccccceEeecCccc
Confidence 245678888888765
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-28 Score=265.20 Aligned_cols=245 Identities=23% Similarity=0.245 Sum_probs=215.9
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEc
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 186 (786)
++|++|+|++|.+.+..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+++ .+|..+. ++|++|++
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l 130 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRI 130 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEEC
Confidence 68999999999999988889999999999999999999988999999999999999999998 5666555 89999999
Q ss_pred cCCcCcccCCccccCCCCCCEEEccCCcCCc--CCCC-CCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcC
Q 003926 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYG--EVPD-FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAI 263 (786)
Q Consensus 187 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~-~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~ 263 (786)
++|.+++..+..|.++++|+.|++++|.++. ..+. +..+ +|+.|++++|.+++......++|+.|++++|.+++..
T Consensus 131 ~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~i~~~~ 209 (332)
T 2ft3_A 131 HDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKDLPETLNELHLDHNKIQAIE 209 (332)
T ss_dssp CSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSCCSSSCSSCSCCBCCSSCCCCCC
T ss_pred CCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCccCccccCCCCEEECCCCcCCccC
Confidence 9999998777779999999999999999963 4443 6677 9999999999998865556689999999999999988
Q ss_pred hhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcC-
Q 003926 264 PAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAG- 342 (786)
Q Consensus 264 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~- 342 (786)
|..+..+++|+.|+|++|++++..|..+..+++|+.|++++|+++ .+|..+..+++|+.|++++|++++..+..+...
T Consensus 210 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~ 288 (332)
T 2ft3_A 210 LEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVG 288 (332)
T ss_dssp TTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSS
T ss_pred HHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccc
Confidence 899999999999999999999988889999999999999999999 678889999999999999999997666655432
Q ss_pred -----CCCcEEEcCCcccC
Q 003926 343 -----SKNRVVLYARNCLA 356 (786)
Q Consensus 343 -----~~~~~~~~~~N~l~ 356 (786)
..+..+.+.+|.+.
T Consensus 289 ~~~~~~~l~~L~l~~N~~~ 307 (332)
T 2ft3_A 289 FGVKRAYYNGISLFNNPVP 307 (332)
T ss_dssp CCSSSCCBSEEECCSSSSC
T ss_pred cccccccccceEeecCccc
Confidence 45678999998875
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-28 Score=265.52 Aligned_cols=264 Identities=21% Similarity=0.240 Sum_probs=224.7
Q ss_pred CEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCC
Q 003926 75 SITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSIL 154 (786)
Q Consensus 75 ~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 154 (786)
.++.|++++|.+....| ..+.++++|++|+|++|.+++..|..|+++++|++|+|++|.++ .+|..+.
T Consensus 55 ~l~~L~l~~n~i~~~~~---------~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~-- 122 (332)
T 2ft3_A 55 DTTLLDLQNNDISELRK---------DDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP-- 122 (332)
T ss_dssp TCCEEECCSSCCCEECT---------TTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--
T ss_pred CCeEEECCCCcCCccCH---------hHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--
Confidence 46677777766554333 35779999999999999999999999999999999999999998 5666554
Q ss_pred CCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCc--ccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEE
Q 003926 155 TSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFN--GTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLD 232 (786)
Q Consensus 155 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ 232 (786)
++|++|+|++|++++..+..|..+++|+.|++++|.++ +..|..|..+ +|+.|++++|.+++.+..+. ++|++|+
T Consensus 123 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l~~~~~--~~L~~L~ 199 (332)
T 2ft3_A 123 SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKDLP--ETLNELH 199 (332)
T ss_dssp TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSCCSSSC--SSCSCCB
T ss_pred ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCccCcccc--CCCCEEE
Confidence 89999999999999877788999999999999999996 4778889888 99999999999997554443 7999999
Q ss_pred cccCCCCCCCCcc---ccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCc
Q 003926 233 LENNALGPQFPKV---GKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTG 309 (786)
Q Consensus 233 L~~N~l~~~~p~~---~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g 309 (786)
|++|.+++..+.. .++|+.|++++|++++..|..+..+++|+.|+|++|+++ .+|..+..+++|+.|++++|++++
T Consensus 200 l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~ 278 (332)
T 2ft3_A 200 LDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITK 278 (332)
T ss_dssp CCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCB
T ss_pred CCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCc
Confidence 9999999877654 468999999999999988889999999999999999999 788889999999999999999998
Q ss_pred ccCccCCC------CCCCCEEeCcCCcCC--ccCChhhhcCCCCcEEEcCCcc
Q 003926 310 KLFDDLSC------NPELGFVDLSSNLLT--GQLPNCLLAGSKNRVVLYARNC 354 (786)
Q Consensus 310 ~~~~~~~~------~~~L~~l~ls~N~l~--g~~p~~~~~~~~~~~~~~~~N~ 354 (786)
..+..+.. .+.|+.|++++|.+. +..|..+..+..++.+++++|.
T Consensus 279 ~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 279 VGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred cChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 87776654 367899999999998 5667777777888888887763
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.8e-29 Score=267.81 Aligned_cols=228 Identities=24% Similarity=0.270 Sum_probs=203.9
Q ss_pred CCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEE
Q 003926 105 KLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVL 184 (786)
Q Consensus 105 ~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 184 (786)
..+.++.|+|++|++. .+|..++++++|++|+|++|.++ .+|..++++++|++|+|++|.++ .+|..|+++++|++|
T Consensus 79 ~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L 155 (328)
T 4fcg_A 79 TQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLREL 155 (328)
T ss_dssp TSTTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEE
T ss_pred cccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEE
Confidence 4578999999999998 67888999999999999999999 88999999999999999999998 889999999999999
Q ss_pred EccCCcCcccCCccccC---------CCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhcc
Q 003926 185 SLRNNMFNGTLPDSFSY---------LENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILS 255 (786)
Q Consensus 185 ~Ls~N~l~~~~p~~~~~---------l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls 255 (786)
+|++|.+.+.+|..+.. +++|+.|+|++|.++..+..+..+++|++|+|++|.++
T Consensus 156 ~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~N~l~---------------- 219 (328)
T 4fcg_A 156 SIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLS---------------- 219 (328)
T ss_dssp EEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCCCCCGGGGGCTTCCEEEEESSCCC----------------
T ss_pred ECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcCcchHhhcCCCCCCEEEccCCCCC----------------
Confidence 99999999999987765 88888888888888843335778888888888777663
Q ss_pred CCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccC
Q 003926 256 KNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQL 335 (786)
Q Consensus 256 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~ 335 (786)
.+|..+..+++|+.|+|++|++.+.+|..+..+++|+.|+|++|++.+.+|..+..+++|+.|+|++|++.|.+
T Consensus 220 ------~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~i 293 (328)
T 4fcg_A 220 ------ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRL 293 (328)
T ss_dssp ------CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCC
T ss_pred ------cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhc
Confidence 25567888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhhcCCCCcEEEcCCcccCC
Q 003926 336 PNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 336 p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
|..+..++++..+.+..|.+..
T Consensus 294 P~~l~~L~~L~~l~l~~~~~~~ 315 (328)
T 4fcg_A 294 PSLIAQLPANCIILVPPHLQAQ 315 (328)
T ss_dssp CGGGGGSCTTCEEECCGGGSCC
T ss_pred cHHHhhccCceEEeCCHHHHHH
Confidence 9999999999999998776643
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.7e-29 Score=298.53 Aligned_cols=262 Identities=23% Similarity=0.319 Sum_probs=130.4
Q ss_pred CCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCC-Ccc-CCCccCCCCC-------CCCEEeccCCCCC
Q 003926 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLG-LWG-PLSGKISRLS-------SLEILNMSSNFLN 144 (786)
Q Consensus 74 ~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~-l~g-~~~~~~~~l~-------~L~~L~Ls~N~l~ 144 (786)
.+++.|+|++|.+.+.+|. .+.+|++|++|+|++|. ++| .+|..+++++ +|+.|+|++|+++
T Consensus 491 ~~L~~L~Ls~N~l~~~iP~---------~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~ 561 (876)
T 4ecn_A 491 KDLTDVELYNCPNMTQLPD---------FLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE 561 (876)
T ss_dssp TTCCEEEEESCTTCCSCCG---------GGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC
T ss_pred CCCCEEECcCCCCCccChH---------HHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC
Confidence 4688888888887777664 34455555555555555 555 4554333332 5555555555555
Q ss_pred CCCCc--cccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCC-CCEEEccCCcCCcCCCC
Q 003926 145 GAIPQ--ELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLEN-LRVLALSNNHFYGEVPD 221 (786)
Q Consensus 145 ~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~ 221 (786)
.+|. .|+++++|+.|+|++|+++ .+| .|+.+++|+.|+|++|.++ .+|..|.++++ |+.|+|++|.++ .+|.
T Consensus 562 -~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~ 636 (876)
T 4ecn_A 562 -EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPN 636 (876)
T ss_dssp -BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCS
T ss_pred -ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCch
Confidence 4555 5555555555555555555 455 5555555555555555555 45555555555 555555555555 2332
Q ss_pred -CCCCC--cCCEEEcccCCCCCCCCccc--------cchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchh
Q 003926 222 -FSGLT--YLQVLDLENNALGPQFPKVG--------KKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQA 290 (786)
Q Consensus 222 -~~~l~--~L~~L~L~~N~l~~~~p~~~--------~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 290 (786)
+..++ +|+.|+|++|.+.+.+|... .+|+.|++++|.++...+..+..+++|+.|+|++|+|+ .+|..
T Consensus 637 ~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~ 715 (876)
T 4ecn_A 637 IFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SIPEN 715 (876)
T ss_dssp CCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS-CCCTT
T ss_pred hhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC-ccChH
Confidence 33332 25555555555554443211 23444445555444222222234444444444444444 33332
Q ss_pred hCCC--------CCCcEEEeecCCCCcccCccCC--CCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCC
Q 003926 291 LLSL--------PSITYLNIADNKLTGKLFDDLS--CNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYAR 352 (786)
Q Consensus 291 ~~~l--------~~L~~L~l~~N~l~g~~~~~~~--~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~ 352 (786)
+... ++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|++++ +|..+..+.++..+++++
T Consensus 716 ~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~ 785 (876)
T 4ecn_A 716 SLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRH 785 (876)
T ss_dssp SSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCC
T ss_pred HhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCC
Confidence 2221 14444444444444 3343333 44444444444444444 444444444444444433
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-28 Score=263.22 Aligned_cols=265 Identities=20% Similarity=0.220 Sum_probs=225.7
Q ss_pred CEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCC
Q 003926 75 SITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSIL 154 (786)
Q Consensus 75 ~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 154 (786)
.++.|++++|.+++..+. .+.++++|++|+|++|.+++..|..|.++++|++|+|++|.++ .+|..+.
T Consensus 53 ~l~~L~L~~n~i~~~~~~---------~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~-- 120 (330)
T 1xku_A 53 DTALLDLQNNKITEIKDG---------DFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP-- 120 (330)
T ss_dssp TCCEEECCSSCCCCBCTT---------TTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--
T ss_pred CCeEEECCCCcCCEeChh---------hhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--
Confidence 467788887776654332 5678999999999999999999999999999999999999998 5666554
Q ss_pred CCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCc--ccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEE
Q 003926 155 TSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFN--GTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLD 232 (786)
Q Consensus 155 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ 232 (786)
++|++|++++|.+++..+..|.++++|+.|++++|.+. +..+..|.++++|+.|++++|.++.....+. ++|++|+
T Consensus 121 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~~--~~L~~L~ 198 (330)
T 1xku_A 121 KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLP--PSLTELH 198 (330)
T ss_dssp TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCC--TTCSEEE
T ss_pred ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccCCcccc--ccCCEEE
Confidence 89999999999999888889999999999999999996 4788899999999999999999987544443 8999999
Q ss_pred cccCCCCCCCCcc---ccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCc
Q 003926 233 LENNALGPQFPKV---GKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTG 309 (786)
Q Consensus 233 L~~N~l~~~~p~~---~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g 309 (786)
+++|.+++..|.. .++|+.|++++|.+++..+..+..+++|+.|+|++|+++ .+|..+..+++|+.|++++|++++
T Consensus 199 l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~ 277 (330)
T 1xku_A 199 LDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISA 277 (330)
T ss_dssp CTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCC
T ss_pred CCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCc
Confidence 9999998876654 468999999999999988889999999999999999999 789999999999999999999998
Q ss_pred ccCccCCC------CCCCCEEeCcCCcCCc--cCChhhhcCCCCcEEEcCCcc
Q 003926 310 KLFDDLSC------NPELGFVDLSSNLLTG--QLPNCLLAGSKNRVVLYARNC 354 (786)
Q Consensus 310 ~~~~~~~~------~~~L~~l~ls~N~l~g--~~p~~~~~~~~~~~~~~~~N~ 354 (786)
..+..+.. .+.|..|++++|.+.. ..|..+.....+..+++++|+
T Consensus 278 ~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 278 IGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred cChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 87776643 3778999999999863 445666667777888887773
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-28 Score=278.76 Aligned_cols=252 Identities=21% Similarity=0.189 Sum_probs=234.8
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEc
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 186 (786)
++|+.|+|++|++.+..+..|.++++|+.|+|++|.+++..|..|.++++|++|+|++|++++..+..|.++++|++|+|
T Consensus 32 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 111 (477)
T 2id5_A 32 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI 111 (477)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEEC
T ss_pred CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEEC
Confidence 57899999999999999999999999999999999999999999999999999999999999777778999999999999
Q ss_pred cCCcCcccCCccccCCCCCCEEEccCCcCCcCCC-CCCCCCcCCEEEcccCCCCCCCCc---cccchhhhhccCCccCCc
Q 003926 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVP-DFSGLTYLQVLDLENNALGPQFPK---VGKKLVTMILSKNKFRSA 262 (786)
Q Consensus 187 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~p~---~~~~L~~L~ls~N~l~~~ 262 (786)
++|.+.+..|..|.++++|+.|+|++|.+++..+ .|.++++|+.|+|++|.+++..+. ..++|+.|++++|.+.+.
T Consensus 112 s~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~ 191 (477)
T 2id5_A 112 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAI 191 (477)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEE
T ss_pred CCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEe
Confidence 9999999999999999999999999999998776 499999999999999999876654 357899999999999999
Q ss_pred ChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcC
Q 003926 263 IPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAG 342 (786)
Q Consensus 263 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~ 342 (786)
.+..|..+++|+.|+|++|.+.+.+|..+....+|+.|+|++|++++..+..+..+++|+.|+|++|.+++..+..+..+
T Consensus 192 ~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 271 (477)
T 2id5_A 192 RDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHEL 271 (477)
T ss_dssp CTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTC
T ss_pred ChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhcccc
Confidence 89899999999999999999999999888888899999999999997766788999999999999999998888888889
Q ss_pred CCCcEEEcCCcccCCC
Q 003926 343 SKNRVVLYARNCLAAG 358 (786)
Q Consensus 343 ~~~~~~~~~~N~l~~~ 358 (786)
.++..+.+++|.+.+.
T Consensus 272 ~~L~~L~L~~n~l~~~ 287 (477)
T 2id5_A 272 LRLQEIQLVGGQLAVV 287 (477)
T ss_dssp TTCCEEECCSSCCSEE
T ss_pred ccCCEEECCCCccceE
Confidence 9999999999998763
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-29 Score=291.38 Aligned_cols=157 Identities=23% Similarity=0.192 Sum_probs=126.5
Q ss_pred CEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCC
Q 003926 75 SITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSIL 154 (786)
Q Consensus 75 ~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 154 (786)
+++.|++++|.+++..|. .+.++++|++|+|++|.+.+..|+.|+++++|++|+|++|.+++..|..|+++
T Consensus 27 ~L~~L~Ls~n~l~~~~~~---------~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 97 (549)
T 2z81_A 27 AMKSLDLSFNKITYIGHG---------DLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPL 97 (549)
T ss_dssp TCCEEECCSSCCCEECSS---------TTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTC
T ss_pred CccEEECcCCccCccChh---------hhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccC
Confidence 688899988887655443 46688899999999999988888889999999999999999988877778999
Q ss_pred CCCcEEEcccccCCC-CCCcccCCCCCCCEEEccCCcCcccCC-ccccCCCCCCEEEccCCcCCcCCCC-CCC-------
Q 003926 155 TSLQTLILDENMLAG-RVPDWLGSLPILAVLSLRNNMFNGTLP-DSFSYLENLRVLALSNNHFYGEVPD-FSG------- 224 (786)
Q Consensus 155 ~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~------- 224 (786)
++|++|+|++|.+++ .+|..|+++++|++|++++|.+.+.+| ..|.++++|++|++++|.+++.+|. +..
T Consensus 98 ~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 177 (549)
T 2z81_A 98 SSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHL 177 (549)
T ss_dssp TTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEE
T ss_pred CCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceE
Confidence 999999999999886 467788899999999999988544554 5788899999999999988876653 433
Q ss_pred -----------------CCcCCEEEcccCCCCC
Q 003926 225 -----------------LTYLQVLDLENNALGP 240 (786)
Q Consensus 225 -----------------l~~L~~L~L~~N~l~~ 240 (786)
+++|++|++++|++++
T Consensus 178 ~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~ 210 (549)
T 2z81_A 178 TLHLSESAFLLEIFADILSSVRYLELRDTNLAR 210 (549)
T ss_dssp EEECSBSTTHHHHHHHSTTTBSEEEEESCBCTT
T ss_pred ecccCcccccchhhHhhcccccEEEccCCcccc
Confidence 5667777777777665
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-28 Score=291.61 Aligned_cols=275 Identities=19% Similarity=0.175 Sum_probs=216.3
Q ss_pred CCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccC
Q 003926 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSI 153 (786)
Q Consensus 74 ~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 153 (786)
.+++.|++++|.+.+..+ ..+.++++|++|+|++|.+.+..|..|+++++|++|+|++|.+++..+..|++
T Consensus 25 ~~l~~L~Ls~n~l~~~~~---------~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~ 95 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPA---------ANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAF 95 (680)
T ss_dssp TTCSEEECCSSCCCCCCG---------GGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred CCCcEEECCCCCCCCcCH---------HHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhcc
Confidence 368888888887765433 24668889999999999998888888889999999999999988766667889
Q ss_pred CCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCC---CCCCCcCCE
Q 003926 154 LTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD---FSGLTYLQV 230 (786)
Q Consensus 154 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~---~~~l~~L~~ 230 (786)
+++|++|+|++|++++..|..|+++++|++|+|++|.+++..|..|+++++|++|++++|.+++..+. +..+++|+.
T Consensus 96 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~ 175 (680)
T 1ziw_A 96 CTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKK 175 (680)
T ss_dssp CTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESE
T ss_pred CCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccE
Confidence 99999999999999877778889999999999999999888888888899999999999988877664 335688899
Q ss_pred EEcccCCCCCCCCccc------------------------------cchhhhhccCCccCCcChhhhcCccc--cceeec
Q 003926 231 LDLENNALGPQFPKVG------------------------------KKLVTMILSKNKFRSAIPAEVSSYYQ--LQRLDL 278 (786)
Q Consensus 231 L~L~~N~l~~~~p~~~------------------------------~~L~~L~ls~N~l~~~~p~~~~~l~~--L~~L~L 278 (786)
|++++|.+++..|... ++|+.|++++|.+++..|..|.+++. |+.|+|
T Consensus 176 L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~L 255 (680)
T 1ziw_A 176 LELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDL 255 (680)
T ss_dssp EECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEEC
T ss_pred EECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEEC
Confidence 9999888877665421 34677778888888877877777755 888888
Q ss_pred cCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCc-----cCCh----hhhcCCCCcEEE
Q 003926 279 SSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTG-----QLPN----CLLAGSKNRVVL 349 (786)
Q Consensus 279 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g-----~~p~----~~~~~~~~~~~~ 349 (786)
++|++++..|..|..+++|++|++++|++++..|..+..+++|+.|++++|...+ .+|. .+..+.++..++
T Consensus 256 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~ 335 (680)
T 1ziw_A 256 SYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLN 335 (680)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEE
T ss_pred CCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEE
Confidence 8888887777788888888888888888888777777777777777777665554 2332 445566677777
Q ss_pred cCCcccCC
Q 003926 350 YARNCLAA 357 (786)
Q Consensus 350 ~~~N~l~~ 357 (786)
+++|.+.+
T Consensus 336 l~~n~l~~ 343 (680)
T 1ziw_A 336 MEDNDIPG 343 (680)
T ss_dssp CCSCCBCC
T ss_pred CCCCccCC
Confidence 77776665
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.7e-29 Score=284.59 Aligned_cols=109 Identities=19% Similarity=0.234 Sum_probs=63.2
Q ss_pred ccchhhhhccCCccCCcChhhhcCccccceeeccCccccC--CCchhhCCCCCCcEEEeecCCCCcccCcc-CCCCCCCC
Q 003926 246 GKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVG--PFPQALLSLPSITYLNIADNKLTGKLFDD-LSCNPELG 322 (786)
Q Consensus 246 ~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~g~~~~~-~~~~~~L~ 322 (786)
.++|++|++++|++++.+|..+..+++|+.|+|++|++++ .+|..+..+++|++|++++|++++.+|.. +..+++|+
T Consensus 323 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~ 402 (520)
T 2z7x_B 323 ISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLL 402 (520)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCC
T ss_pred CCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCC
Confidence 3456666666666666666666666666666666666665 44555666666666666666666544432 45555555
Q ss_pred EEeCcCCcCCccCChhhhcCCCCcEEEcCCcccC
Q 003926 323 FVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLA 356 (786)
Q Consensus 323 ~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~ 356 (786)
.|++++|++++.+|..+. ..+..+++++|.++
T Consensus 403 ~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~ 434 (520)
T 2z7x_B 403 SLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK 434 (520)
T ss_dssp EEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC
T ss_pred EEECcCCCCCcchhhhhc--ccCCEEECCCCccc
Confidence 555555555555554432 34555555555544
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-28 Score=298.59 Aligned_cols=247 Identities=23% Similarity=0.269 Sum_probs=205.8
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEc
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 186 (786)
++|+.|+|++|.+.+..|..|..+++|+.|+|++|.+++..|..|..+++|++|+|++|.+++..|..|..+++|+.|+|
T Consensus 266 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 345 (844)
T 3j0a_A 266 SSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDL 345 (844)
T ss_dssp SCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEEC
T ss_pred CCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEEC
Confidence 67888888888888888888888888888888888888888888888888888888888888887888888888888888
Q ss_pred cCCcCcccCCccccCCCCCCEEEccCCcCCcCC------------------CC-----------------------CCCC
Q 003926 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYGEV------------------PD-----------------------FSGL 225 (786)
Q Consensus 187 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~------------------p~-----------------------~~~l 225 (786)
++|.+.+..+..|.++++|+.|+|++|.+++.. |. +.++
T Consensus 346 ~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l 425 (844)
T 3j0a_A 346 QKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRV 425 (844)
T ss_dssp CSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTC
T ss_pred CCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccccCchhhhhhcC
Confidence 888888777777888888888888888876421 10 2257
Q ss_pred CcCCEEEcccCCCCCCCCc----cccchhhhhccCCccC-----CcChhhhcCccccceeeccCccccCCCchhhCCCCC
Q 003926 226 TYLQVLDLENNALGPQFPK----VGKKLVTMILSKNKFR-----SAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPS 296 (786)
Q Consensus 226 ~~L~~L~L~~N~l~~~~p~----~~~~L~~L~ls~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 296 (786)
++|+.|+|++|++++..+. ..++|+.|++++|.++ +..|..|.++++|+.|+|++|+|++..|..|..+++
T Consensus 426 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 505 (844)
T 3j0a_A 426 PHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTA 505 (844)
T ss_dssp TTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCS
T ss_pred CccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhh
Confidence 7888888888888754433 3578999999999987 445567889999999999999999999999999999
Q ss_pred CcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCCC
Q 003926 297 ITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAAG 358 (786)
Q Consensus 297 L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~~ 358 (786)
|+.|+|++|+|++..+..+. ++|+.|+|++|++++.+|..+. .+..+++++|.+.+.
T Consensus 506 L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~---~L~~l~l~~Np~~C~ 562 (844)
T 3j0a_A 506 LRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFV---SLSVLDITHNKFICE 562 (844)
T ss_dssp CSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCS---SCCEEEEEEECCCCS
T ss_pred hheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhC---CcCEEEecCCCcccc
Confidence 99999999999988777765 8899999999999999987653 678999999988763
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.4e-28 Score=285.45 Aligned_cols=284 Identities=20% Similarity=0.174 Sum_probs=230.0
Q ss_pred CCEEEEEeCCCCCCCCCCCCCc-----------CC----ccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEec
Q 003926 74 ESITQLHIVGNKRAPMLPLSFS-----------MD----SFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNM 138 (786)
Q Consensus 74 ~~v~~l~l~~~~~~~~l~~~~~-----------~~----~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~L 138 (786)
.+++.|++++|.+.+..|..|. .+ ..|..+.++++|++|+|++|.+.+..+..|+++++|++|+|
T Consensus 56 ~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 135 (606)
T 3vq2_A 56 SELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNV 135 (606)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEEC
T ss_pred ccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeC
Confidence 3567777777766554443221 11 12557889999999999999999998889999999999999
Q ss_pred cCCCCCC-CCCccccCCCCCcEEEcccccCCCCCCcccC-----------------------------------------
Q 003926 139 SSNFLNG-AIPQELSILTSLQTLILDENMLAGRVPDWLG----------------------------------------- 176 (786)
Q Consensus 139 s~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~----------------------------------------- 176 (786)
++|.+++ .+|..|+++++|++|+|++|++++..|..|+
T Consensus 136 ~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n~ 215 (606)
T 3vq2_A 136 AHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGNF 215 (606)
T ss_dssp CSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCC
T ss_pred CCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCceeeeeeccCCc
Confidence 9999986 6799999999999999999998765543221
Q ss_pred --------------------------------------------------------------------------------
Q 003926 177 -------------------------------------------------------------------------------- 176 (786)
Q Consensus 177 -------------------------------------------------------------------------------- 176 (786)
T Consensus 216 ~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~~ 295 (606)
T 3vq2_A 216 NSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGV 295 (606)
T ss_dssp SCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEESC
T ss_pred cchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccccccCCCCCEEEecCc
Confidence
Q ss_pred ----------------------------------------------------CCCCCCEEEccCCcCccc--CCccccCC
Q 003926 177 ----------------------------------------------------SLPILAVLSLRNNMFNGT--LPDSFSYL 202 (786)
Q Consensus 177 ----------------------------------------------------~l~~L~~L~Ls~N~l~~~--~p~~~~~l 202 (786)
.+++|++|++++|.+++. +|..+..+
T Consensus 296 ~~~~l~~l~~~~~L~~L~l~~n~l~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~ 375 (606)
T 3vq2_A 296 SIKYLEDVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGT 375 (606)
T ss_dssp CCCCCCCCCTTCCCSEEEEESCCCSSCCCCCCSSCCEEEEESCSSCEECCCCCCTTCCEEECCSSCEEEEEECCHHHHCC
T ss_pred cchhhhhccccccCCEEEcccccCcccccCCCCccceeeccCCcCccchhhccCCCCCEEECcCCccCCCcchhhhhccC
Confidence 123344444444444433 24455556
Q ss_pred CCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCC-c---cccchhhhhccCCccCCcChhhhcCccccceeec
Q 003926 203 ENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFP-K---VGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDL 278 (786)
Q Consensus 203 ~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p-~---~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L 278 (786)
++|+.|++++|.+++..+.+..+++|+.|++++|.+.+..| . ..++|+.|++++|.+++.+|..+..+++|+.|+|
T Consensus 376 ~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 455 (606)
T 3vq2_A 376 NSLRHLDLSFNGAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKM 455 (606)
T ss_dssp SCCCEEECCSCSEEEECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEEC
T ss_pred CcccEeECCCCccccchhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEEC
Confidence 66666666666666555568889999999999999988776 2 2478999999999999999999999999999999
Q ss_pred cCccccC-CCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 279 SSNRFVG-PFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 279 s~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
++|++.+ .+|..+..+++|+.|++++|++++..|..+..+++|+.|++++|++++.+|..+..+..++.+++++|.++.
T Consensus 456 ~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 535 (606)
T 3vq2_A 456 AGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIET 535 (606)
T ss_dssp TTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCC
T ss_pred CCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcc
Confidence 9999998 478899999999999999999999999999999999999999999999999999999999999999999874
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3.2e-28 Score=273.69 Aligned_cols=226 Identities=23% Similarity=0.199 Sum_probs=198.0
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEc
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 186 (786)
++|++|+|++|++.+..|..|.++++|+.|+|++|.+++..|..|.++++|++|+|++|++++..+..|..+++|++|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 58999999999999999999999999999999999999999999999999999999999999888888999999999999
Q ss_pred cCCcCcccCCccccCCCCCCEEEccCCcCCcCCC--CCCCCCcCCEEEcccCCCCCCCCcc--ccchhhhhccCCccCCc
Q 003926 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVP--DFSGLTYLQVLDLENNALGPQFPKV--GKKLVTMILSKNKFRSA 262 (786)
Q Consensus 187 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p--~~~~l~~L~~L~L~~N~l~~~~p~~--~~~L~~L~ls~N~l~~~ 262 (786)
++|.++...+..|.++++|+.|+|++|+..+.++ .|.++++|++|+|++|++++. |.. ..+|+.|+|++|.|++.
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~ 233 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-PNLTPLVGLEELEMSGNHFPEI 233 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-CCCTTCTTCCEEECTTSCCSEE
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-ccccccccccEEECcCCcCccc
Confidence 9999998878889999999999999965555554 388999999999999999764 433 36788888888888888
Q ss_pred ChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCc
Q 003926 263 IPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTG 333 (786)
Q Consensus 263 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g 333 (786)
.|..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..+..+++|+.|+|++|.+.-
T Consensus 234 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 234 RPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp CGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEEC
T ss_pred CcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCC
Confidence 88888888888888888888888888888888888888888888887777777888888888888887753
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.6e-28 Score=281.19 Aligned_cols=265 Identities=22% Similarity=0.233 Sum_probs=166.3
Q ss_pred CEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCC
Q 003926 75 SITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSIL 154 (786)
Q Consensus 75 ~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 154 (786)
+++.|++++|.+.+..+ ..+.++++|++|+|++|.+++..|+.|.++++|++|+|++|.++ .+|.. .+
T Consensus 53 ~L~~L~Ls~N~i~~~~~---------~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l 120 (562)
T 3a79_B 53 RTKALSLSQNSISELRM---------PDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PM 120 (562)
T ss_dssp TCCEEECCSSCCCCCCG---------GGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CC
T ss_pred CcCEEECCCCCccccCh---------hhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--cc
Confidence 56677777776654433 35667888888888888888888888888888888888888887 45554 78
Q ss_pred CCCcEEEcccccCCC-CCCcccCCCCCCCEEEccCCcCcccCCccccCCCCC--CEEEccCCcC--CcCCCC-CCCC---
Q 003926 155 TSLQTLILDENMLAG-RVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENL--RVLALSNNHF--YGEVPD-FSGL--- 225 (786)
Q Consensus 155 ~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L--~~L~Ls~N~l--~~~~p~-~~~l--- 225 (786)
++|++|+|++|++++ .+|..|+++++|++|+|++|.+++. .|..+++| +.|++++|.+ ++..|. +..+
T Consensus 121 ~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~ 197 (562)
T 3a79_B 121 ASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTT 197 (562)
T ss_dssp TTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEE
T ss_pred ccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCcc
Confidence 888888888888876 3567888888888888888877642 23333333 5555555554 332221 1111
Q ss_pred ------------------------------------------------------------------------------Cc
Q 003926 226 ------------------------------------------------------------------------------TY 227 (786)
Q Consensus 226 ------------------------------------------------------------------------------~~ 227 (786)
++
T Consensus 198 ~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~ 277 (562)
T 3a79_B 198 VLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRP 277 (562)
T ss_dssp EEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSS
T ss_pred eEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhccc
Confidence 13
Q ss_pred CCEEEcccCCCCCCCC--------------------------------------------------------ccccchhh
Q 003926 228 LQVLDLENNALGPQFP--------------------------------------------------------KVGKKLVT 251 (786)
Q Consensus 228 L~~L~L~~N~l~~~~p--------------------------------------------------------~~~~~L~~ 251 (786)
|++|++++|.+++.+| ...++|++
T Consensus 278 L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~ 357 (562)
T 3a79_B 278 VEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTF 357 (562)
T ss_dssp EEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCE
T ss_pred ccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceE
Confidence 3444444444443322 12245666
Q ss_pred hhccCCccCCcChhhhcCccccceeeccCccccC--CCchhhCCCCCCcEEEeecCCCCcccCc-cCCCCCCCCEEeCcC
Q 003926 252 MILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVG--PFPQALLSLPSITYLNIADNKLTGKLFD-DLSCNPELGFVDLSS 328 (786)
Q Consensus 252 L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~g~~~~-~~~~~~~L~~l~ls~ 328 (786)
|++++|++++.+|..+.++++|+.|+|++|++++ .+|..+.++++|+.|++++|++++.+|. .+..+++|+.|++++
T Consensus 358 L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~ 437 (562)
T 3a79_B 358 LNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSS 437 (562)
T ss_dssp EECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCS
T ss_pred EECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCC
Confidence 7777777776666667777777777777777765 3345566777777777777777664443 355556666666666
Q ss_pred CcCCccCChhhhcCCCCcEEEcCCcccC
Q 003926 329 NLLTGQLPNCLLAGSKNRVVLYARNCLA 356 (786)
Q Consensus 329 N~l~g~~p~~~~~~~~~~~~~~~~N~l~ 356 (786)
|++++.+|..+. .+++.+++++|.++
T Consensus 438 n~l~~~~~~~l~--~~L~~L~L~~N~l~ 463 (562)
T 3a79_B 438 NMLTGSVFRCLP--PKVKVLDLHNNRIM 463 (562)
T ss_dssp SCCCGGGGSSCC--TTCSEEECCSSCCC
T ss_pred CCCCcchhhhhc--CcCCEEECCCCcCc
Confidence 666655554432 34555555555554
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.9e-28 Score=271.27 Aligned_cols=225 Identities=25% Similarity=0.232 Sum_probs=189.2
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEc
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 186 (786)
++|+.|+|++|++.+..+..|.++++|+.|+|++|.+++..+..|.++++|++|+|++|++++..+..|..+++|++|+|
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 143 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEEC
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeC
Confidence 67899999999999999999999999999999999999988899999999999999999999777788999999999999
Q ss_pred cCCcCcccCCccccCCCCCCEEEccCCcCCcCCC--CCCCCCcCCEEEcccCCCCCCCCcc--ccchhhhhccCCccCCc
Q 003926 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVP--DFSGLTYLQVLDLENNALGPQFPKV--GKKLVTMILSKNKFRSA 262 (786)
Q Consensus 187 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p--~~~~l~~L~~L~L~~N~l~~~~p~~--~~~L~~L~ls~N~l~~~ 262 (786)
++|.+....+..|.++++|+.|+|++|+..+.++ .|.++++|++|+|++|.++. +|.. ..+|+.|+|++|++++.
T Consensus 144 ~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~l~~L~~L~Ls~N~l~~~ 222 (440)
T 3zyj_A 144 RNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IPNLTPLIKLDELDLSGNHLSAI 222 (440)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CCCCTTCSSCCEEECTTSCCCEE
T ss_pred CCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-ccccCCCcccCEEECCCCccCcc
Confidence 9999998888899999999999999965555554 38999999999999999874 3332 35677777777777777
Q ss_pred ChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCC
Q 003926 263 IPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLT 332 (786)
Q Consensus 263 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~ 332 (786)
.|..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..+..+++|+.|+|++|.+.
T Consensus 223 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 223 RPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp CTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred ChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 7777777777777777777777777777777777777777777777766666777777777777777765
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-28 Score=283.15 Aligned_cols=267 Identities=18% Similarity=0.182 Sum_probs=167.5
Q ss_pred CCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccC
Q 003926 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSI 153 (786)
Q Consensus 74 ~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 153 (786)
.+++.|++++|.+.+..| ..+.++++|++|+|++|.+++..|..|+++++|++|+|++|+++ .+|.. .
T Consensus 21 ~~L~~L~Ls~n~i~~~~~---------~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~ 88 (520)
T 2z7x_B 21 QKTTILNISQNYISELWT---------SDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--P 88 (520)
T ss_dssp TTCSEEECCSSCCCCCCH---------HHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--C
T ss_pred ccccEEECCCCcccccCh---------hhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--c
Confidence 456666666665544322 34567777777777777777777777777777777777777777 35544 6
Q ss_pred CCCCcEEEcccccCCC-CCCcccCCCCCCCEEEccCCcCcccCCccccCCCCC--CEEEccCCcC--CcCCCC-CCC---
Q 003926 154 LTSLQTLILDENMLAG-RVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENL--RVLALSNNHF--YGEVPD-FSG--- 224 (786)
Q Consensus 154 l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L--~~L~Ls~N~l--~~~~p~-~~~--- 224 (786)
+++|++|+|++|.+++ .+|..|+++++|++|+|++|.+++ ..|..+++| +.|++++|.+ ++..|. +..
T Consensus 89 l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~ 165 (520)
T 2z7x_B 89 TVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNT 165 (520)
T ss_dssp CCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCE
T ss_pred cCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccccccccccccccc
Confidence 7777777777777776 467777777777777777777765 346666666 7777777777 444332 222
Q ss_pred -----------------------CCcCCEEEcccCC-------CCCCCCc-----------------------------c
Q 003926 225 -----------------------LTYLQVLDLENNA-------LGPQFPK-----------------------------V 245 (786)
Q Consensus 225 -----------------------l~~L~~L~L~~N~-------l~~~~p~-----------------------------~ 245 (786)
+++|+.|++++|. +.+.+|. .
T Consensus 166 ~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~ 245 (520)
T 2z7x_B 166 ESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVW 245 (520)
T ss_dssp EEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHH
T ss_pred ceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhh
Confidence 3333333333332 0000000 0
Q ss_pred ccchhhhhccCCccCCcChhhh-----cCccccceeeccCccccCCCc-hh-------------------------hCCC
Q 003926 246 GKKLVTMILSKNKFRSAIPAEV-----SSYYQLQRLDLSSNRFVGPFP-QA-------------------------LLSL 294 (786)
Q Consensus 246 ~~~L~~L~ls~N~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~~~~p-~~-------------------------~~~l 294 (786)
.++|+.|++++|+++|.+|..+ .++++|+.+++++|.+ .+| .. +..+
T Consensus 246 ~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l 323 (520)
T 2z7x_B 246 HTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKI 323 (520)
T ss_dssp TSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSC
T ss_pred hCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCccccccchhhC
Confidence 1145566666666666666655 5555555555555544 222 11 1566
Q ss_pred CCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCc--cCChhhhcCCCCcEEEcCCcccCC
Q 003926 295 PSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTG--QLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 295 ~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g--~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
++|++|++++|++++.+|..+..+++|+.|++++|++++ .+|..+..+.+++.+++++|.+.+
T Consensus 324 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~ 388 (520)
T 2z7x_B 324 SPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSY 388 (520)
T ss_dssp CCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBC
T ss_pred CcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCc
Confidence 677777777777777777777777777777777777775 556666667777777777777664
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-28 Score=282.49 Aligned_cols=150 Identities=22% Similarity=0.199 Sum_probs=131.1
Q ss_pred EEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCC
Q 003926 77 TQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTS 156 (786)
Q Consensus 77 ~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 156 (786)
+.+++++++++. +|. .+. ++|++|+|++|.+.+..|..|.++++|++|+|++|++++..|..|.++++
T Consensus 34 ~~l~ls~~~L~~-ip~---------~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 101 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPK---------DLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQD 101 (562)
T ss_dssp CEEECTTSCCCS-CCT---------TSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTT
T ss_pred cEEEcCCCCCcc-CCC---------CCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCC
Confidence 788999988775 443 222 78999999999999999999999999999999999999999999999999
Q ss_pred CcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcc-cCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcC--CEEEc
Q 003926 157 LQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNG-TLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYL--QVLDL 233 (786)
Q Consensus 157 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L--~~L~L 233 (786)
|++|+|++|+++ .+|.. .+++|++|+|++|.+++ .+|..|+++++|++|+|++|.+++ ..+..+++| +.|++
T Consensus 102 L~~L~Ls~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~--~~~~~l~~L~L~~L~L 176 (562)
T 3a79_B 102 LEYLDVSHNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ--LDLLPVAHLHLSCILL 176 (562)
T ss_dssp CCEEECTTSCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT--TTTGGGTTSCEEEEEE
T ss_pred CCEEECCCCcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCcccc--CchhhhhhceeeEEEe
Confidence 999999999998 57766 89999999999999997 457899999999999999999986 346666666 99999
Q ss_pred ccCCC--CCCCC
Q 003926 234 ENNAL--GPQFP 243 (786)
Q Consensus 234 ~~N~l--~~~~p 243 (786)
++|.+ ++..|
T Consensus 177 ~~n~l~~~~~~~ 188 (562)
T 3a79_B 177 DLVSYHIKGGET 188 (562)
T ss_dssp EESSCCCCSSSC
T ss_pred ecccccccccCc
Confidence 99998 55544
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.4e-31 Score=299.97 Aligned_cols=216 Identities=22% Similarity=0.197 Sum_probs=139.9
Q ss_pred CCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEE
Q 003926 105 KLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVL 184 (786)
Q Consensus 105 ~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 184 (786)
.+++|++|+|++|.+++..|..|+++++|++|+|++|.+++.+| +..+++|++|+|++|.+++..+ .++|+.|
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L 104 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETL 104 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEE
Confidence 34478888888888888888888888888888888888887665 8888888888888888875332 3788888
Q ss_pred EccCCcCcccCCccccCCCCCCEEEccCCcCCcCCC-CCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcC
Q 003926 185 SLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVP-DFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAI 263 (786)
Q Consensus 185 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~ 263 (786)
+|++|.+++..+. .+++|+.|+|++|.+++..| .|+.+++|+.|+|++|.+++..
T Consensus 105 ~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~--------------------- 160 (487)
T 3oja_A 105 HAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN--------------------- 160 (487)
T ss_dssp ECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEE---------------------
T ss_pred ECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcC---------------------
Confidence 8888888876554 35778888888888887766 4777788888888777776543
Q ss_pred hhhhc-CccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcC
Q 003926 264 PAEVS-SYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAG 342 (786)
Q Consensus 264 p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~ 342 (786)
|..+. .+++|+.|+|++|.|++. |. +..+++|+.|+|++|+|++..| .+..+++|+.|+|++|.+++ +|..+..+
T Consensus 161 ~~~l~~~l~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l 236 (487)
T 3oja_A 161 FAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFS 236 (487)
T ss_dssp GGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCC
T ss_pred hHHHhhhCCcccEEecCCCccccc-cc-cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccC
Confidence 33332 344555555555555443 11 2234555555555555554322 24444555555555555553 44444444
Q ss_pred CCCcEEEcCCccc
Q 003926 343 SKNRVVLYARNCL 355 (786)
Q Consensus 343 ~~~~~~~~~~N~l 355 (786)
+.+..+++++|.+
T Consensus 237 ~~L~~L~l~~N~l 249 (487)
T 3oja_A 237 QNLEHFDLRGNGF 249 (487)
T ss_dssp TTCCEEECTTCCB
T ss_pred CCCCEEEcCCCCC
Confidence 4455555555544
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-28 Score=265.99 Aligned_cols=250 Identities=22% Similarity=0.245 Sum_probs=198.5
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEc
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 186 (786)
++|++|+|++|++++..+..|.++++|+.|+|++|.+++..|..|.++++|++|+|++|++++..+..|.++++|++|+|
T Consensus 52 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 131 (353)
T 2z80_A 52 EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNL 131 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEEC
T ss_pred ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEEC
Confidence 47889999999998877778889999999999999998888888889999999999999988655566888999999999
Q ss_pred cCCcCcccCC-ccccCCCCCCEEEccCCc-CCcCCC-CCCCCCcCCEEEcccCCCCCCCCcc---ccchhhhhccCCccC
Q 003926 187 RNNMFNGTLP-DSFSYLENLRVLALSNNH-FYGEVP-DFSGLTYLQVLDLENNALGPQFPKV---GKKLVTMILSKNKFR 260 (786)
Q Consensus 187 s~N~l~~~~p-~~~~~l~~L~~L~Ls~N~-l~~~~p-~~~~l~~L~~L~L~~N~l~~~~p~~---~~~L~~L~ls~N~l~ 260 (786)
++|.+++..+ ..|.++++|+.|++++|+ +++..+ .|.++++|++|++++|.+++..|.. .++|++|++++|.++
T Consensus 132 ~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~ 211 (353)
T 2z80_A 132 LGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI 211 (353)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST
T ss_pred CCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc
Confidence 9998885433 478889999999999884 555544 4888889999999999888776654 367888899999886
Q ss_pred CcChhhhcCccccceeeccCccccCCCchhhC---CCCCCcEEEeecCCCCc----ccCccCCCCCCCCEEeCcCCcCCc
Q 003926 261 SAIPAEVSSYYQLQRLDLSSNRFVGPFPQALL---SLPSITYLNIADNKLTG----KLFDDLSCNPELGFVDLSSNLLTG 333 (786)
Q Consensus 261 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~l~~N~l~g----~~~~~~~~~~~L~~l~ls~N~l~g 333 (786)
...+..+..+++|+.|+|++|++++..+..+. ..+.++.+++++|.+++ .+|..+..+++|+.|++++|+++
T Consensus 212 ~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~- 290 (353)
T 2z80_A 212 LLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK- 290 (353)
T ss_dssp THHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-
T ss_pred cchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-
Confidence 54444456688899999999998876555443 45678888888888876 36677788888999999999888
Q ss_pred cCChhh-hcCCCCcEEEcCCcccCC
Q 003926 334 QLPNCL-LAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 334 ~~p~~~-~~~~~~~~~~~~~N~l~~ 357 (786)
.+|..+ ..+.+++.+++++|.+.+
T Consensus 291 ~i~~~~~~~l~~L~~L~L~~N~~~~ 315 (353)
T 2z80_A 291 SVPDGIFDRLTSLQKIWLHTNPWDC 315 (353)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred ccCHHHHhcCCCCCEEEeeCCCccC
Confidence 566654 677888888888888765
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.5e-28 Score=279.56 Aligned_cols=284 Identities=22% Similarity=0.196 Sum_probs=202.9
Q ss_pred CEEEEEeCCCCCCCCCCCCCc-----------CC---cc-ccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEecc
Q 003926 75 SITQLHIVGNKRAPMLPLSFS-----------MD---SF-VTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMS 139 (786)
Q Consensus 75 ~v~~l~l~~~~~~~~l~~~~~-----------~~---~~-~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls 139 (786)
+++.|++++|.+++..+..|. .. .+ +..+.++++|++|+|++|.+.+..|..|+++++|++|+|+
T Consensus 29 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 108 (570)
T 2z63_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (570)
T ss_dssp SCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred cccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccccc
Confidence 577788887776644332221 11 12 2346778888888888888877777778888888888888
Q ss_pred CCCCCCCCCccccCCCCCcEEEcccccCCC-CCCcccCCCCCCCEEEccCCcCcccCCccccCCC---------------
Q 003926 140 SNFLNGAIPQELSILTSLQTLILDENMLAG-RVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLE--------------- 203 (786)
Q Consensus 140 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--------------- 203 (786)
+|.+++..+..++++++|++|+|++|.+++ .+|..|+++++|++|++++|.+++..|..|+.++
T Consensus 109 ~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~ 188 (570)
T 2z63_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (570)
T ss_dssp TSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCC
T ss_pred ccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCC
Confidence 888876666568888888888888888876 4678888888888888888877655443333332
Q ss_pred --------------------------------------------------------------------------------
Q 003926 204 -------------------------------------------------------------------------------- 203 (786)
Q Consensus 204 -------------------------------------------------------------------------------- 203 (786)
T Consensus 189 l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~ 268 (570)
T 2z63_A 189 MNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLD 268 (570)
T ss_dssp CCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETT
T ss_pred ceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcch
Confidence
Q ss_pred --------------CCCEEEccCCcCCcCCCCC------------------------------------------CCCCc
Q 003926 204 --------------NLRVLALSNNHFYGEVPDF------------------------------------------SGLTY 227 (786)
Q Consensus 204 --------------~L~~L~Ls~N~l~~~~p~~------------------------------------------~~l~~ 227 (786)
+|+.|++++|.+++.++.+ ..+++
T Consensus 269 ~~~~~~~~~~~~l~~L~~L~l~~~~l~~l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~~~~ 348 (570)
T 2z63_A 269 YYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPS 348 (570)
T ss_dssp EEESCSTTTTGGGTTCSEEEEESCEECSCCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCBCTT
T ss_pred hhhhhchhhhcCcCcccEEEecCccchhhhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCccccccccccCCC
Confidence 3333333333322111101 22344
Q ss_pred CCEEEcccCCCCCCC--C------------------------c--cccchhhhhccCCccCCcCh-hhhcCccccceeec
Q 003926 228 LQVLDLENNALGPQF--P------------------------K--VGKKLVTMILSKNKFRSAIP-AEVSSYYQLQRLDL 278 (786)
Q Consensus 228 L~~L~L~~N~l~~~~--p------------------------~--~~~~L~~L~ls~N~l~~~~p-~~~~~l~~L~~L~L 278 (786)
|+.|++++|.+++.. | . ..++|+.|++++|.+++..| ..+.++++|+.|+|
T Consensus 349 L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l 428 (570)
T 2z63_A 349 LEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDI 428 (570)
T ss_dssp CCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEEC
T ss_pred CCEEeCcCCccCccccccccccccCccCEEECCCCccccccccccccCCCCEEEccCCccccccchhhhhcCCCCCEEeC
Confidence 445555555443221 0 0 12456777888888877766 56889999999999
Q ss_pred cCccccCCCchhhCCCCCCcEEEeecCCCC-cccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 279 SSNRFVGPFPQALLSLPSITYLNIADNKLT-GKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 279 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~-g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
++|.+.+..|..+..+++|+.|++++|.++ +.+|..+..+++|+.|++++|++++..|..+..+++++.+++++|.+++
T Consensus 429 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 508 (570)
T 2z63_A 429 SHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKS 508 (570)
T ss_dssp TTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred cCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCC
Confidence 999999999999999999999999999998 6788999999999999999999999889999889999999999999887
Q ss_pred C
Q 003926 358 G 358 (786)
Q Consensus 358 ~ 358 (786)
.
T Consensus 509 ~ 509 (570)
T 2z63_A 509 V 509 (570)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.1e-28 Score=282.46 Aligned_cols=246 Identities=18% Similarity=0.121 Sum_probs=213.7
Q ss_pred cccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCC
Q 003926 101 TTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPI 180 (786)
Q Consensus 101 ~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 180 (786)
..+.++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..|+++++|++|+|++|.+++..|..|+.+++
T Consensus 93 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 172 (597)
T 3oja_B 93 YAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTS 172 (597)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTT
T ss_pred HHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCc
Confidence 47889999999999999999999999999999999999999999877777899999999999999999999999999999
Q ss_pred CCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCc-------------------CCCCCCCCCcCCEEEcccCCCCCC
Q 003926 181 LAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYG-------------------EVPDFSGLTYLQVLDLENNALGPQ 241 (786)
Q Consensus 181 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-------------------~~p~~~~l~~L~~L~L~~N~l~~~ 241 (786)
|++|+|++|.+++.. ++.+++|+.|++++|.+++ ..+. ..++|+.|+|++|.+++.
T Consensus 173 L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~--~~~~L~~L~L~~n~l~~~ 247 (597)
T 3oja_B 173 LQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGP--VNVELTILKLQHNNLTDT 247 (597)
T ss_dssp CCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECS--CCSCCCEEECCSSCCCCC
T ss_pred CcEEECcCCCCCCcC---hhhhhhhhhhhcccCccccccCCchhheeeccCCcccccccc--cCCCCCEEECCCCCCCCC
Confidence 999999999998753 4556666666666666654 2211 135899999999999874
Q ss_pred CCc--cccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCC
Q 003926 242 FPK--VGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNP 319 (786)
Q Consensus 242 ~p~--~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~ 319 (786)
+. ..++|+.|+|++|.+++.+|..|..+++|+.|+|++|++++ +|..+..+++|+.|+|++|.++ .+|..+..++
T Consensus 248 -~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~ 324 (597)
T 3oja_B 248 -AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFD 324 (597)
T ss_dssp -GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHT
T ss_pred -hhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCC
Confidence 32 24789999999999999999999999999999999999997 6888889999999999999999 5677788899
Q ss_pred CCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 320 ELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 320 ~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
+|+.|+|++|.+++. | +..+..+..+++++|.+.+
T Consensus 325 ~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~ 359 (597)
T 3oja_B 325 RLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDC 359 (597)
T ss_dssp TCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEH
T ss_pred CCCEEECCCCCCCCc-C--hhhcCCCCEEEeeCCCCCC
Confidence 999999999999865 3 4456789999999998875
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-28 Score=261.24 Aligned_cols=227 Identities=26% Similarity=0.265 Sum_probs=173.3
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCC--CCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEE
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNG--AIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVL 184 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 184 (786)
++|++|+|++|++....+..|.++++|+.|+|++|.++. ..|..+..+++|++|+|++|.++ .+|..+..+++|++|
T Consensus 28 ~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L 106 (306)
T 2z66_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHL 106 (306)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEE
T ss_pred CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEE
Confidence 578999999999987766678999999999999999983 34677888999999999999987 577789999999999
Q ss_pred EccCCcCcccCC-ccccCCCCCCEEEccCCcCCcCCCC-CCCCCcCCEEEcccCCCCC-CCCcc---ccchhhhhccCCc
Q 003926 185 SLRNNMFNGTLP-DSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGP-QFPKV---GKKLVTMILSKNK 258 (786)
Q Consensus 185 ~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~-~~p~~---~~~L~~L~ls~N~ 258 (786)
++++|.+++..+ ..|..+++|++|++++|.+++..+. +..+++|++|+|++|.+++ .+|.. .++|+.|++++|+
T Consensus 107 ~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~ 186 (306)
T 2z66_A 107 DFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQ 186 (306)
T ss_dssp ECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSC
T ss_pred ECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCC
Confidence 999999987655 5788999999999999999887775 7888999999999888765 23332 3456666666666
Q ss_pred cCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCC-CCCEEeCcCCcCCcc
Q 003926 259 FRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNP-ELGFVDLSSNLLTGQ 334 (786)
Q Consensus 259 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~-~L~~l~ls~N~l~g~ 334 (786)
+++..|..+..+++|+.|+|++|++++..+..+..+++|+.|++++|++++..|..+..++ +|+.|+|++|.+++.
T Consensus 187 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 187 LEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECS
T ss_pred cCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecc
Confidence 6666666666666666666666666665555666666666666666666666666666553 666666666666543
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-27 Score=281.98 Aligned_cols=275 Identities=22% Similarity=0.177 Sum_probs=238.0
Q ss_pred CCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccC
Q 003926 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSI 153 (786)
Q Consensus 74 ~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 153 (786)
.+++.|++++|.+.+..|. .+.++++|++|+|++|.+++..+..|+++++|++|+|++|.+++..|..|++
T Consensus 49 ~~L~~L~Ls~n~l~~~~~~---------~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 119 (680)
T 1ziw_A 49 SQLTSLDVGFNTISKLEPE---------LCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVK 119 (680)
T ss_dssp TTCSEEECCSSCCCCCCTT---------HHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTT
T ss_pred CcCcEEECCCCccCccCHH---------HHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccc
Confidence 5789999999887765553 5678999999999999999877778999999999999999999888889999
Q ss_pred CCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCcccc--CCCCCCEEEccCCcCCcCCCC-CCCC-----
Q 003926 154 LTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFS--YLENLRVLALSNNHFYGEVPD-FSGL----- 225 (786)
Q Consensus 154 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~-~~~l----- 225 (786)
+++|++|+|++|.+++..|..++++++|++|++++|.+++..+..+. .+++|+.|++++|.+++..|. |..+
T Consensus 120 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 199 (680)
T 1ziw_A 120 QKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFG 199 (680)
T ss_dssp CTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECE
T ss_pred cCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhh
Confidence 99999999999999998899999999999999999999987777654 568999999999999887764 3322
Q ss_pred ----------------------CcCCEEEcccCCCCCCCCccc-----cchhhhhccCCccCCcChhhhcCccccceeec
Q 003926 226 ----------------------TYLQVLDLENNALGPQFPKVG-----KKLVTMILSKNKFRSAIPAEVSSYYQLQRLDL 278 (786)
Q Consensus 226 ----------------------~~L~~L~L~~N~l~~~~p~~~-----~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L 278 (786)
++|+.|++++|.+++..|... ++|+.|++++|++++..|..|..+++|+.|+|
T Consensus 200 L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 279 (680)
T 1ziw_A 200 LFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFL 279 (680)
T ss_dssp EECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred hhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeC
Confidence 568888999999887777653 34999999999999999999999999999999
Q ss_pred cCccccCCCchhhCCCCCCcEEEeecCCCCcc-----cCc----cCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEE
Q 003926 279 SSNRFVGPFPQALLSLPSITYLNIADNKLTGK-----LFD----DLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVL 349 (786)
Q Consensus 279 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~-----~~~----~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~ 349 (786)
++|++.+..|..|..+++|+.|++++|...+. +|. .+..+++|+.|++++|.+++..|..+..+.+++.++
T Consensus 280 ~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 359 (680)
T 1ziw_A 280 EYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLS 359 (680)
T ss_dssp CSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEE
T ss_pred CCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEE
Confidence 99999999999999999999999998876652 333 677889999999999999998888888899999999
Q ss_pred cCCcccCC
Q 003926 350 YARNCLAA 357 (786)
Q Consensus 350 ~~~N~l~~ 357 (786)
+++|.+.+
T Consensus 360 Ls~n~~~~ 367 (680)
T 1ziw_A 360 LSNSFTSL 367 (680)
T ss_dssp CTTCBSCC
T ss_pred CCCCchhh
Confidence 99987654
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.2e-27 Score=261.61 Aligned_cols=248 Identities=19% Similarity=0.125 Sum_probs=211.3
Q ss_pred cccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCC
Q 003926 101 TTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPI 180 (786)
Q Consensus 101 ~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 180 (786)
..+.++++|++|+|++|.+.+..|..|+++++|++|+|++|.++...+..|.++++|++|+|++|.+++..|..|..+++
T Consensus 87 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 166 (390)
T 3o6n_A 87 YAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTS 166 (390)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTT
T ss_pred hhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCC
Confidence 46889999999999999999999999999999999999999999766666799999999999999999888899999999
Q ss_pred CCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCC-C-C---------------CCCCCcCCEEEcccCCCCCCCC
Q 003926 181 LAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEV-P-D---------------FSGLTYLQVLDLENNALGPQFP 243 (786)
Q Consensus 181 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p-~---------------~~~l~~L~~L~L~~N~l~~~~p 243 (786)
|++|++++|.+++.. ++.+++|+.|++++|.+++.. | . ....++|+.|++++|.+++. +
T Consensus 167 L~~L~l~~n~l~~~~---~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~n~l~~~-~ 242 (390)
T 3o6n_A 167 LQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDT-A 242 (390)
T ss_dssp CCEEECCSSCCSBCC---GGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEECCCCSSCCEEECCSSCCCCC-G
T ss_pred CCEEECCCCcCCccc---cccccccceeecccccccccCCCCcceEEECCCCeeeeccccccccccEEECCCCCCccc-H
Confidence 999999999998652 455666666666666655411 1 1 12246899999999999875 3
Q ss_pred c--cccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCC
Q 003926 244 K--VGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPEL 321 (786)
Q Consensus 244 ~--~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L 321 (786)
. ..++|+.|++++|.+++..|..|..+++|+.|+|++|++++ +|..+..+++|+.|+|++|++++ +|..+..+++|
T Consensus 243 ~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L 320 (390)
T 3o6n_A 243 WLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRL 320 (390)
T ss_dssp GGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCCC-CGGGHHHHTTC
T ss_pred HHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCccee-cCccccccCcC
Confidence 3 24789999999999999999999999999999999999986 67778899999999999999994 56667888999
Q ss_pred CEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 322 GFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 322 ~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
+.|++++|+++.. | +....+++.+++++|.+.+
T Consensus 321 ~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~ 353 (390)
T 3o6n_A 321 ENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDC 353 (390)
T ss_dssp SEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEH
T ss_pred CEEECCCCcccee-C--chhhccCCEEEcCCCCccc
Confidence 9999999999864 4 5567789999999998865
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.8e-30 Score=273.89 Aligned_cols=263 Identities=23% Similarity=0.250 Sum_probs=169.2
Q ss_pred CCCCCCCCCCCCCCCCCCccEEeCCCCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCC-ccCCCccC
Q 003926 49 LSSWNITTEFCNTEPTSSLTVVCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGL-WGPLSGKI 127 (786)
Q Consensus 49 l~~W~~~~~~C~w~~~~~~~v~c~~~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l-~g~~~~~~ 127 (786)
..+|.....|+.+. ...+.|...+++.+++.++.+ .+|. .+... |+.|+|++|.+ .+.+|..+
T Consensus 21 ~~~~~~~~~c~~~~---~~~~~~~~~~L~~l~l~~n~l--~~p~---------~~~~~--L~~L~L~~n~l~~~~~~~~~ 84 (312)
T 1wwl_A 21 KPDWSSAFNCLGAA---DVELYGGGRSLEYLLKRVDTE--ADLG---------QFTDI--IKSLSLKRLTVRAARIPSRI 84 (312)
T ss_dssp SCCGGGGGGSSSCS---EEEEEEEEEECTTHHHHCCTT--CCCH---------HHHHH--HHHCCCCEEEEEEEECBHHH
T ss_pred ccchHHHhhhhccc---cEEEEccCCCceeEeeccccc--ccHH---------HHHHH--HhhcccccccccCCCcCHHH
Confidence 34565444444433 234556555666677777665 3332 22222 67778888887 45666666
Q ss_pred C-------CCCCCCEEeccCCCCCCCCCccc--cCCCCCcEEEcccccCCCCCCcccCCC-----CCCCEEEccCCcCcc
Q 003926 128 S-------RLSSLEILNMSSNFLNGAIPQEL--SILTSLQTLILDENMLAGRVPDWLGSL-----PILAVLSLRNNMFNG 193 (786)
Q Consensus 128 ~-------~l~~L~~L~Ls~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~ 193 (786)
. ++++|++|+|++|.+++.+|..+ ..+++|++|+|++|++++. |..++.+ ++|++|+|++|++.+
T Consensus 85 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~ 163 (312)
T 1wwl_A 85 LFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLN 163 (312)
T ss_dssp HHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCC
T ss_pred HHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCcc
Confidence 5 68888888888888888888776 7888888888888888876 7777766 788888888888887
Q ss_pred cCCccccCCCCCCEEEccCCcCCcCC---CC--CCCCCcCCEEEcccCCCCCC--CCc----cccchhhhhccCCccCCc
Q 003926 194 TLPDSFSYLENLRVLALSNNHFYGEV---PD--FSGLTYLQVLDLENNALGPQ--FPK----VGKKLVTMILSKNKFRSA 262 (786)
Q Consensus 194 ~~p~~~~~l~~L~~L~Ls~N~l~~~~---p~--~~~l~~L~~L~L~~N~l~~~--~p~----~~~~L~~L~ls~N~l~~~ 262 (786)
..|..|+++++|++|+|++|++.+.+ +. +..+++|++|+|++|.+++. ++. ..++|+.|++++|++++.
T Consensus 164 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 243 (312)
T 1wwl_A 164 FSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDA 243 (312)
T ss_dssp CCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSS
T ss_pred chHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcc
Confidence 77778888888888888888877642 23 37778888888888877631 111 124555666666666555
Q ss_pred Ch-hhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCc
Q 003926 263 IP-AEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTG 333 (786)
Q Consensus 263 ~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g 333 (786)
+| ..+..+++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|++. |. +..+++|+.|++++|++++
T Consensus 244 ~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 244 AGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred cchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 43 23444555666666666665 4555444 5566666666666554 33 5555566666666665553
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=5.6e-27 Score=246.74 Aligned_cols=234 Identities=23% Similarity=0.216 Sum_probs=178.9
Q ss_pred cEEeCCCCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCC
Q 003926 68 TVVCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAI 147 (786)
Q Consensus 68 ~v~c~~~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~ 147 (786)
++.|.....+.++.+++.+.. +|. . -.++|++|+|++|.+++..+..|.++++|++|+|++|.+++..
T Consensus 5 ~C~C~~~~~~~~~c~~~~l~~-ip~---------~--~~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 72 (285)
T 1ozn_A 5 ACVCYNEPKVTTSCPQQGLQA-VPV---------G--IPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARID 72 (285)
T ss_dssp TCEEECSSSCEEECCSSCCSS-CCT---------T--CCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred CceECCCCCeEEEcCcCCccc-CCc---------C--CCCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeC
Confidence 366755444566766655442 232 1 2368999999999999988889999999999999999999988
Q ss_pred CccccCCCCCcEEEccccc-CCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCC
Q 003926 148 PQELSILTSLQTLILDENM-LAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGL 225 (786)
Q Consensus 148 p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l 225 (786)
|..|.++++|++|+|++|. +....|..|..+++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+. |..+
T Consensus 73 ~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 152 (285)
T 1ozn_A 73 AAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDL 152 (285)
T ss_dssp TTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred HhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccC
Confidence 9999999999999999997 7766688999999999999999999988888899999999999999999877765 7889
Q ss_pred CcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecC
Q 003926 226 TYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADN 305 (786)
Q Consensus 226 ~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 305 (786)
++|++|+|++|.+++. .+..|..+++|+.|+|++|++++..|..|..+++|+.|++++|
T Consensus 153 ~~L~~L~l~~n~l~~~---------------------~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 211 (285)
T 1ozn_A 153 GNLTHLFLHGNRISSV---------------------PERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFAN 211 (285)
T ss_dssp TTCCEEECCSSCCCEE---------------------CTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCccEEECCCCccccc---------------------CHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCC
Confidence 9999999888877532 2334555566666666666666666666666666666666666
Q ss_pred CCCcccCccCCCCCCCCEEeCcCCcCCcc
Q 003926 306 KLTGKLFDDLSCNPELGFVDLSSNLLTGQ 334 (786)
Q Consensus 306 ~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ 334 (786)
++++..+..+..+++|+.|++++|.++..
T Consensus 212 ~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 240 (285)
T 1ozn_A 212 NLSALPTEALAPLRALQYLRLNDNPWVCD 240 (285)
T ss_dssp CCSCCCHHHHTTCTTCCEEECCSSCEECS
T ss_pred cCCcCCHHHcccCcccCEEeccCCCccCC
Confidence 66665555566666666666666666543
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-27 Score=259.15 Aligned_cols=274 Identities=18% Similarity=0.168 Sum_probs=223.9
Q ss_pred CCCCCCCCCCCCCCCCccEEeCC-----------CCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCC
Q 003926 51 SWNITTEFCNTEPTSSLTVVCYE-----------ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGL 119 (786)
Q Consensus 51 ~W~~~~~~C~w~~~~~~~v~c~~-----------~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l 119 (786)
.|.....+|.|.+ .+.|.. .+++.|++++|.+....+ ..+.++++|++|+|++|.+
T Consensus 22 ~~~~~~~~C~~~~----~c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~---------~~~~~l~~L~~L~L~~n~l 88 (353)
T 2z80_A 22 SSNQASLSCDRNG----ICKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISN---------SDLQRCVNLQALVLTSNGI 88 (353)
T ss_dssp -----CCEECTTS----EEECCSTTCSSCCTTCCTTCCEEECTTSCCCEECT---------TTTTTCTTCCEEECTTSCC
T ss_pred CCCccCCCCCCCe----EeeCCCCCcccccccccccCcEEECCCCcCcccCH---------HHhccCCCCCEEECCCCcc
Confidence 4555567888875 134432 257888888887664332 2567899999999999999
Q ss_pred ccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCC-cccCCCCCCCEEEccCC-cCcccCCc
Q 003926 120 WGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVP-DWLGSLPILAVLSLRNN-MFNGTLPD 197 (786)
Q Consensus 120 ~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N-~l~~~~p~ 197 (786)
++..|..|.++++|++|+|++|.+++..+..|.++++|++|+|++|++++..+ ..|..+++|++|++++| .+.+..|.
T Consensus 89 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~ 168 (353)
T 2z80_A 89 NTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRK 168 (353)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTT
T ss_pred CccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHH
Confidence 99999999999999999999999997766669999999999999999995444 48999999999999999 57777788
Q ss_pred cccCCCCCCEEEccCCcCCcCCCC-CCCCCcCCEEEcccCCCCCCCCcc---ccchhhhhccCCccCCcChhhhc---Cc
Q 003926 198 SFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKV---GKKLVTMILSKNKFRSAIPAEVS---SY 270 (786)
Q Consensus 198 ~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~p~~---~~~L~~L~ls~N~l~~~~p~~~~---~l 270 (786)
.|.++++|+.|++++|.+++..|. +..+++|++|++++|.++...+.. .++|+.|++++|.+++..+..+. ..
T Consensus 169 ~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~ 248 (353)
T 2z80_A 169 DFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETN 248 (353)
T ss_dssp TTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CC
T ss_pred HccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCcccccccccccccccc
Confidence 899999999999999999988664 899999999999999985433222 47899999999999987665543 35
Q ss_pred cccceeeccCccccC----CCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCCh
Q 003926 271 YQLQRLDLSSNRFVG----PFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPN 337 (786)
Q Consensus 271 ~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~ 337 (786)
..++.++|++|.+++ .+|..+..+++|+.|++++|+++...+..+..+++|+.|++++|++++..|.
T Consensus 249 ~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~~ 319 (353)
T 2z80_A 249 SLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 319 (353)
T ss_dssp CCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred chhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCCC
Confidence 678889999988876 4788999999999999999999954444468999999999999999988773
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.3e-27 Score=251.14 Aligned_cols=243 Identities=24% Similarity=0.185 Sum_probs=214.2
Q ss_pred EEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCC--CCCcccCCCCCCCEEEccC
Q 003926 111 VLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAG--RVPDWLGSLPILAVLSLRN 188 (786)
Q Consensus 111 ~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~ 188 (786)
.++.++++++.. |..+ .++|+.|+|++|.++...+..|.++++|++|+|++|.++. ..|..+..+++|++|+|++
T Consensus 11 ~l~c~~~~l~~i-p~~~--~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~ 87 (306)
T 2z66_A 11 EIRCNSKGLTSV-PTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSF 87 (306)
T ss_dssp EEECCSSCCSSC-CSCC--CTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCS
T ss_pred EEEcCCCCcccC-CCCC--CCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCC
Confidence 456666666543 4333 2689999999999996666668999999999999999983 3467788899999999999
Q ss_pred CcCcccCCccccCCCCCCEEEccCCcCCcCCC--CCCCCCcCCEEEcccCCCCCCCCcc---ccchhhhhccCCccCC-c
Q 003926 189 NMFNGTLPDSFSYLENLRVLALSNNHFYGEVP--DFSGLTYLQVLDLENNALGPQFPKV---GKKLVTMILSKNKFRS-A 262 (786)
Q Consensus 189 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p--~~~~l~~L~~L~L~~N~l~~~~p~~---~~~L~~L~ls~N~l~~-~ 262 (786)
|.+.. +|..|..+++|++|++++|.+++..+ .+..+++|++|++++|.+.+..+.. .++|+.|++++|.+++ .
T Consensus 88 n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 166 (306)
T 2z66_A 88 NGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENF 166 (306)
T ss_dssp CSEEE-EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGE
T ss_pred Ccccc-ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCcccccc
Confidence 99984 77789999999999999999998765 5899999999999999998777764 4789999999999987 6
Q ss_pred ChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcC
Q 003926 263 IPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAG 342 (786)
Q Consensus 263 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~ 342 (786)
+|..+..+++|+.|+|++|++++..|..+..+++|+.|+|++|++++..+..+..+++|+.|++++|++++..|..+...
T Consensus 167 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~ 246 (306)
T 2z66_A 167 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHF 246 (306)
T ss_dssp ECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCC
T ss_pred chhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhh
Confidence 78899999999999999999999889999999999999999999999888889999999999999999999999988887
Q ss_pred C-CCcEEEcCCcccCC
Q 003926 343 S-KNRVVLYARNCLAA 357 (786)
Q Consensus 343 ~-~~~~~~~~~N~l~~ 357 (786)
. .+..+++++|.+.+
T Consensus 247 ~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 247 PSSLAFLNLTQNDFAC 262 (306)
T ss_dssp CTTCCEEECTTCCEEC
T ss_pred hccCCEEEccCCCeec
Confidence 4 89999999999876
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.3e-26 Score=258.09 Aligned_cols=252 Identities=23% Similarity=0.186 Sum_probs=179.4
Q ss_pred CCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccC
Q 003926 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSI 153 (786)
Q Consensus 74 ~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 153 (786)
.+++.|+++++.+.+. | .+..+++|++|+|++|++++. | ++.+++|++|+|++|.+++. | +++
T Consensus 42 ~~L~~L~Ls~n~l~~~-~----------~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~ 104 (457)
T 3bz5_A 42 ATLTSLDCHNSSITDM-T----------GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTP 104 (457)
T ss_dssp TTCCEEECCSSCCCCC-T----------TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTT
T ss_pred CCCCEEEccCCCcccC-h----------hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCC
Confidence 4678888888776642 2 356778888888888888775 3 77888888888888888764 3 778
Q ss_pred CCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEc
Q 003926 154 LTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDL 233 (786)
Q Consensus 154 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L 233 (786)
+++|++|+|++|++++ +| ++.+++|++|++++|.+++. + ++++++|++|++++|+..+.+ .+..+++|+.|++
T Consensus 105 l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~-~~~~l~~L~~L~l 177 (457)
T 3bz5_A 105 LTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL-DVTPQTQLTTLDC 177 (457)
T ss_dssp CTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC-CCTTCTTCCEEEC
T ss_pred CCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc-ccccCCcCCEEEC
Confidence 8888888888888876 34 77888888888888888763 3 777788888888888666555 4677788888888
Q ss_pred ccCCCCCCCCccccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCc
Q 003926 234 ENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFD 313 (786)
Q Consensus 234 ~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~ 313 (786)
++|++++......++|+.|++++|++++. .++.+++|+.|+|++|++++ +| +..+++|+.|++++|++++..+.
T Consensus 178 s~n~l~~l~l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~ 251 (457)
T 3bz5_A 178 SFNKITELDVSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVS 251 (457)
T ss_dssp CSSCCCCCCCTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCT
T ss_pred CCCccceeccccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHH
Confidence 88887775433456777788888887764 36777778888888888876 45 77777888888888888776555
Q ss_pred cCCCCC-------CCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 314 DLSCNP-------ELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 314 ~~~~~~-------~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
.+..+. +|+.|++++|.+.|.+| +..+.+++.+++++|...+
T Consensus 252 ~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~ 300 (457)
T 3bz5_A 252 TLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLY 300 (457)
T ss_dssp TCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCC
T ss_pred HCCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccc
Confidence 444443 45566666666666665 2344566666666665443
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.2e-27 Score=271.48 Aligned_cols=139 Identities=27% Similarity=0.362 Sum_probs=128.4
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEc
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 186 (786)
++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 105 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNL 105 (549)
T ss_dssp TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEEC
T ss_pred CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEEC
Confidence 68999999999999999999999999999999999999999999999999999999999999888888999999999999
Q ss_pred cCCcCcc-cCCccccCCCCCCEEEccCCcCCcCCC--CCCCCCcCCEEEcccCCCCCCCCcc
Q 003926 187 RNNMFNG-TLPDSFSYLENLRVLALSNNHFYGEVP--DFSGLTYLQVLDLENNALGPQFPKV 245 (786)
Q Consensus 187 s~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p--~~~~l~~L~~L~L~~N~l~~~~p~~ 245 (786)
++|.+++ ..|..|+++++|++|++++|.+.+.+| .|.++++|++|++++|.+++..|..
T Consensus 106 s~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 167 (549)
T 2z81_A 106 MGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQS 167 (549)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTT
T ss_pred CCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhh
Confidence 9999987 467889999999999999999666555 4999999999999999998866643
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.8e-26 Score=259.38 Aligned_cols=242 Identities=20% Similarity=0.168 Sum_probs=213.7
Q ss_pred EEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCc
Q 003926 111 VLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNM 190 (786)
Q Consensus 111 ~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 190 (786)
.++.++++++. +|..+. ++|+.|+|++|+|++..|..|.++++|+.|+|++|++++..|..|.++++|++|+|++|.
T Consensus 58 ~v~c~~~~l~~-iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~ 134 (452)
T 3zyi_A 58 KVVCTRRGLSE-VPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134 (452)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEEECCCCcCc-cCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCc
Confidence 34445555543 344443 689999999999999999999999999999999999999989999999999999999999
Q ss_pred CcccCCccccCCCCCCEEEccCCcCCcCCC-CCCCCCcCCEEEcccCCCCCCCCc----cccchhhhhccCCccCCcChh
Q 003926 191 FNGTLPDSFSYLENLRVLALSNNHFYGEVP-DFSGLTYLQVLDLENNALGPQFPK----VGKKLVTMILSKNKFRSAIPA 265 (786)
Q Consensus 191 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~p~----~~~~L~~L~ls~N~l~~~~p~ 265 (786)
+++..+..|.++++|++|+|++|.++...+ .|..+++|+.|+|++|+..+.++. ..++|+.|++++|++++. |
T Consensus 135 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~- 212 (452)
T 3zyi_A 135 LTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P- 212 (452)
T ss_dssp CSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-
T ss_pred CCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-
Confidence 998888889999999999999999997666 489999999999999655444443 347899999999999864 4
Q ss_pred hhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCC
Q 003926 266 EVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKN 345 (786)
Q Consensus 266 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~ 345 (786)
.+..+++|+.|+|++|+|++..|..|.++++|+.|+|++|++++..+..+..+++|+.|+|++|++++..+..+..+.++
T Consensus 213 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 292 (452)
T 3zyi_A 213 NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYL 292 (452)
T ss_dssp CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTC
T ss_pred cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCC
Confidence 58899999999999999999999999999999999999999999999999999999999999999998777778888899
Q ss_pred cEEEcCCcccCC
Q 003926 346 RVVLYARNCLAA 357 (786)
Q Consensus 346 ~~~~~~~N~l~~ 357 (786)
..+++++|.+.+
T Consensus 293 ~~L~L~~Np~~C 304 (452)
T 3zyi_A 293 VELHLHHNPWNC 304 (452)
T ss_dssp CEEECCSSCEEC
T ss_pred CEEEccCCCcCC
Confidence 999999998765
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.94 E-value=6.9e-29 Score=264.91 Aligned_cols=245 Identities=21% Similarity=0.181 Sum_probs=213.1
Q ss_pred cCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCC-CCCCCcccc-------CCCCCcEEEcccccCCCCCCcc
Q 003926 103 LVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFL-NGAIPQELS-------ILTSLQTLILDENMLAGRVPDW 174 (786)
Q Consensus 103 l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l-~~~~p~~~~-------~l~~L~~L~L~~N~l~~~~p~~ 174 (786)
++++++|+.|++++|.+ .+|..+... |+.|+|++|.+ .+.+|..+. ++++|++|+|++|++++.+|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 45678899999999999 778766654 99999999999 567787776 8999999999999999999987
Q ss_pred c--CCCCCCCEEEccCCcCcccCCccccCC-----CCCCEEEccCCcCCcCCC-CCCCCCcCCEEEcccCCCCCCC--C-
Q 003926 175 L--GSLPILAVLSLRNNMFNGTLPDSFSYL-----ENLRVLALSNNHFYGEVP-DFSGLTYLQVLDLENNALGPQF--P- 243 (786)
Q Consensus 175 ~--~~l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~--p- 243 (786)
+ ..+++|++|+|++|++++. |..++.+ ++|++|+|++|++++..| .|..+++|++|+|++|++.+.+ |
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 193 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLIS 193 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHH
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHH
Confidence 6 9999999999999999987 8888877 999999999999998885 5999999999999999987642 1
Q ss_pred ----ccccchhhhhccCCccCC--cCh-hhhcCccccceeeccCccccCCCc-hhhCCCCCCcEEEeecCCCCcccCccC
Q 003926 244 ----KVGKKLVTMILSKNKFRS--AIP-AEVSSYYQLQRLDLSSNRFVGPFP-QALLSLPSITYLNIADNKLTGKLFDDL 315 (786)
Q Consensus 244 ----~~~~~L~~L~ls~N~l~~--~~p-~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~g~~~~~~ 315 (786)
...++|++|++++|+|++ .++ ..+.++++|+.|+|++|++++.+| ..+..+++|+.|+|++|+|+ .+|..+
T Consensus 194 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~ 272 (312)
T 1wwl_A 194 ALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGL 272 (312)
T ss_dssp HSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSC
T ss_pred HHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhc
Confidence 345789999999999984 233 345688999999999999999876 56677899999999999999 777777
Q ss_pred CCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 316 SCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 316 ~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
. ++|+.|+|++|++++. |. +....+++.+++++|.+++
T Consensus 273 ~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 273 P--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp C--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred c--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 6 8999999999999976 66 7788889999999999875
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.5e-26 Score=254.96 Aligned_cols=233 Identities=21% Similarity=0.119 Sum_probs=128.8
Q ss_pred CCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccC
Q 003926 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSI 153 (786)
Q Consensus 74 ~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 153 (786)
.+++.|++++|.+++. | ++++++|++|+|++|.+++. + ++++++|++|+|++|.+++. | ++.
T Consensus 64 ~~L~~L~Ls~n~l~~~-~-----------~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~l-~--~~~ 125 (457)
T 3bz5_A 64 TGLTKLICTSNNITTL-D-----------LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTKL-D--VSQ 125 (457)
T ss_dssp TTCSEEECCSSCCSCC-C-----------CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSCC-C--CTT
T ss_pred CCCCEEEccCCcCCeE-c-----------cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCee-c--CCC
Confidence 5688888888876652 1 34566666666666666664 2 66666666666666666653 3 666
Q ss_pred CCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEc
Q 003926 154 LTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDL 233 (786)
Q Consensus 154 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L 233 (786)
+++|++|++++|++++. + ++.+++|++|++++|...+.+ .++.+++|+.|++++|++++. | +..+++|+.|++
T Consensus 126 l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~l-~-l~~l~~L~~L~l 198 (457)
T 3bz5_A 126 NPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITEL-D-VSQNKLLNRLNC 198 (457)
T ss_dssp CTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCCC-C-CTTCTTCCEEEC
T ss_pred CCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCcccee-c-cccCCCCCEEEC
Confidence 66666666666666653 2 556666666666666444444 255566666666666666552 2 555555666666
Q ss_pred ccCCCCCCCCccccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCC-------CCcEEEeecCC
Q 003926 234 ENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLP-------SITYLNIADNK 306 (786)
Q Consensus 234 ~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-------~L~~L~l~~N~ 306 (786)
++|.+++......++|+.|++++|++++ +| +..+++|+.|++++|++++..+..+.++. +|+.|++++|.
T Consensus 199 ~~N~l~~~~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~ 275 (457)
T 3bz5_A 199 DTNNITKLDLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNT 275 (457)
T ss_dssp CSSCCSCCCCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCT
T ss_pred cCCcCCeeccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCc
Confidence 6655555422233455555555555555 33 55555555555555555554433333332 33344444444
Q ss_pred CCcccCccCCCCCCCCEEeCcCCcCCccCC
Q 003926 307 LTGKLFDDLSCNPELGFVDLSSNLLTGQLP 336 (786)
Q Consensus 307 l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p 336 (786)
+.|.+| ++.+++|+.|++++|.+.|.+|
T Consensus 276 ~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~ 303 (457)
T 3bz5_A 276 QLIYFQ--AEGCRKIKELDVTHNTQLYLLD 303 (457)
T ss_dssp TCCEEE--CTTCTTCCCCCCTTCTTCCEEE
T ss_pred cCCccc--ccccccCCEEECCCCcccceec
Confidence 444333 2333444444444444444433
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.4e-26 Score=255.37 Aligned_cols=241 Identities=21% Similarity=0.189 Sum_probs=212.5
Q ss_pred EEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcC
Q 003926 112 LRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMF 191 (786)
Q Consensus 112 L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 191 (786)
++..++++.. +|..+. ++++.|+|++|++++..+..|.++++|+.|+|++|.+++..+..|.++++|++|+|++|++
T Consensus 48 v~c~~~~l~~-iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 124 (440)
T 3zyj_A 48 VICVRKNLRE-VPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRL 124 (440)
T ss_dssp EECCSCCCSS-CCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCC
T ss_pred EEeCCCCcCc-CCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcC
Confidence 3444444433 344443 6899999999999999999999999999999999999988889999999999999999999
Q ss_pred cccCCccccCCCCCCEEEccCCcCCcCCC-CCCCCCcCCEEEcccCCCCCCCCc----cccchhhhhccCCccCCcChhh
Q 003926 192 NGTLPDSFSYLENLRVLALSNNHFYGEVP-DFSGLTYLQVLDLENNALGPQFPK----VGKKLVTMILSKNKFRSAIPAE 266 (786)
Q Consensus 192 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~p~----~~~~L~~L~ls~N~l~~~~p~~ 266 (786)
++..+..|.++++|+.|+|++|.++...+ .|..+++|+.|+|++|+..+.++. ..++|+.|++++|+++. +| .
T Consensus 125 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~ 202 (440)
T 3zyj_A 125 TTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IP-N 202 (440)
T ss_dssp SSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CC-C
T ss_pred CeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-cc-c
Confidence 98777789999999999999999997766 489999999999999665444443 25789999999999985 55 4
Q ss_pred hcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCc
Q 003926 267 VSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNR 346 (786)
Q Consensus 267 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~ 346 (786)
+..+++|+.|+|++|+|++..|..|.++++|+.|+|++|++++..+..+..+++|+.|+|++|++++..+..+..+.++.
T Consensus 203 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 282 (440)
T 3zyj_A 203 LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLE 282 (440)
T ss_dssp CTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCC
T ss_pred cCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCC
Confidence 88999999999999999999999999999999999999999999999999999999999999999987777788889999
Q ss_pred EEEcCCcccCC
Q 003926 347 VVLYARNCLAA 357 (786)
Q Consensus 347 ~~~~~~N~l~~ 357 (786)
.+++++|.+.+
T Consensus 283 ~L~L~~Np~~C 293 (440)
T 3zyj_A 283 RIHLHHNPWNC 293 (440)
T ss_dssp EEECCSSCEEC
T ss_pred EEEcCCCCccC
Confidence 99999998865
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=99.94 E-value=1e-25 Score=244.08 Aligned_cols=259 Identities=20% Similarity=0.261 Sum_probs=208.5
Q ss_pred CCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccC
Q 003926 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSI 153 (786)
Q Consensus 74 ~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 153 (786)
.+++.|+++++.+... +. +.++++|++|+|++|.+.+. +.+.++++|++|+|++|.+++..+ +..
T Consensus 66 ~~L~~L~l~~n~i~~~----------~~-~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~~L~l~~n~i~~~~~--~~~ 130 (347)
T 4fmz_A 66 TNLEYLNLNGNQITDI----------SP-LSNLVKLTNLYIGTNKITDI--SALQNLTNLRELYLNEDNISDISP--LAN 130 (347)
T ss_dssp TTCCEEECCSSCCCCC----------GG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCSEEECTTSCCCCCGG--GTT
T ss_pred CCccEEEccCCccccc----------hh-hhcCCcCCEEEccCCcccCc--hHHcCCCcCCEEECcCCcccCchh--hcc
Confidence 4677777777655432 12 66888888999988888764 358888889999999888886433 888
Q ss_pred CCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEc
Q 003926 154 LTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDL 233 (786)
Q Consensus 154 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L 233 (786)
+++|+.|++++|.....++ .+..+++|++|++++|.+.+..+ +..+++|+.|++++|.+++..+ +..+++|+.|++
T Consensus 131 l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l 206 (347)
T 4fmz_A 131 LTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP-LASLTSLHYFTA 206 (347)
T ss_dssp CTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG-GGGCTTCCEEEC
T ss_pred CCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc-ccCCCccceeec
Confidence 8889999998887665544 48888889999999888875443 7888899999999998876443 788888999999
Q ss_pred ccCCCCCCCCc-cccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccC
Q 003926 234 ENNALGPQFPK-VGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLF 312 (786)
Q Consensus 234 ~~N~l~~~~p~-~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~ 312 (786)
++|.+.+..+. ..++|+.|++++|.+++..+ +..+++|+.|+|++|.+++. +.+..+++|+.|++++|++++.
T Consensus 207 ~~n~l~~~~~~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~-- 280 (347)
T 4fmz_A 207 YVNQITDITPVANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI-- 280 (347)
T ss_dssp CSSCCCCCGGGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--
T ss_pred ccCCCCCCchhhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--
Confidence 99988766542 34788999999999987544 88899999999999999864 4688899999999999999875
Q ss_pred ccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 313 DDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 313 ~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
+.+..+++|+.|++++|.+++..|..+..+++++.+++++|.+++
T Consensus 281 ~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~ 325 (347)
T 4fmz_A 281 SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITD 325 (347)
T ss_dssp GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCC
T ss_pred hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCcccc
Confidence 457788999999999999998888888888999999999998876
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.5e-26 Score=267.27 Aligned_cols=252 Identities=23% Similarity=0.179 Sum_probs=209.1
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEc
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 186 (786)
+++++|||++|+|++..+..|.++++|++|||++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 37899999999999999999999999999999999999988999999999999999999999888889999999999999
Q ss_pred cCCcCcccCCccccCCCCCCEEEccCCcCCcC-CCC-CCCCCcCCEEEcccCCCCCCCCccc------------------
Q 003926 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYGE-VPD-FSGLTYLQVLDLENNALGPQFPKVG------------------ 246 (786)
Q Consensus 187 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~-~~~l~~L~~L~L~~N~l~~~~p~~~------------------ 246 (786)
++|++++..+..|+++++|++|+|++|.+++. +|. +..+++|++|+|++|++++..+...
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n 211 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 211 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccC
Confidence 99999988778899999999999999999864 454 7889999999999998753221100
Q ss_pred --------------------------------------------------------------------------------
Q 003926 247 -------------------------------------------------------------------------------- 246 (786)
Q Consensus 247 -------------------------------------------------------------------------------- 246 (786)
T Consensus 212 ~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~ 291 (635)
T 4g8a_A 212 PMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYL 291 (635)
T ss_dssp CCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECC
T ss_pred cccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhh
Confidence
Q ss_pred -------------------------------------------------------------------------------c
Q 003926 247 -------------------------------------------------------------------------------K 247 (786)
Q Consensus 247 -------------------------------------------------------------------------------~ 247 (786)
+
T Consensus 292 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~ 371 (635)
T 4g8a_A 292 DYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLP 371 (635)
T ss_dssp CSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCT
T ss_pred cccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCccccccc
Confidence 0
Q ss_pred chhhhhccCCccCC--c------------------------------------------------ChhhhcCccccceee
Q 003926 248 KLVTMILSKNKFRS--A------------------------------------------------IPAEVSSYYQLQRLD 277 (786)
Q Consensus 248 ~L~~L~ls~N~l~~--~------------------------------------------------~p~~~~~l~~L~~L~ 277 (786)
+|+.+++++|.+.. . .+..+.++.+++.++
T Consensus 372 ~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ 451 (635)
T 4g8a_A 372 SLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLD 451 (635)
T ss_dssp TCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEE
T ss_pred ccccchhhccccccccccccchhhhhhhhhhhccccccccccccccccccccchhhhhcccccccccccccccccccccc
Confidence 01111222222210 0 001233455667777
Q ss_pred ccCccccCCCchhhCCCCCCcEEEeecCCC-CcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccC
Q 003926 278 LSSNRFVGPFPQALLSLPSITYLNIADNKL-TGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLA 356 (786)
Q Consensus 278 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l-~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~ 356 (786)
++.|.+.+..|..+..+++|+.|++++|++ .+.+|..+..+++|+.|+|++|++++..|..+..+.+++.+++++|.++
T Consensus 452 ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~ 531 (635)
T 4g8a_A 452 ISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFF 531 (635)
T ss_dssp CTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCC
T ss_pred ccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCC
Confidence 888888888899999999999999999985 4567888999999999999999999999999999999999999999998
Q ss_pred CC
Q 003926 357 AG 358 (786)
Q Consensus 357 ~~ 358 (786)
+.
T Consensus 532 ~l 533 (635)
T 4g8a_A 532 SL 533 (635)
T ss_dssp BC
T ss_pred CC
Confidence 74
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=99.94 E-value=6.8e-26 Score=245.48 Aligned_cols=258 Identities=23% Similarity=0.271 Sum_probs=223.7
Q ss_pred CCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccC
Q 003926 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSI 153 (786)
Q Consensus 74 ~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 153 (786)
.+++.|++++|.+... +.+.++++|++|+|++|.+.+..+ +..+++|+.|++++|.....++. +..
T Consensus 88 ~~L~~L~L~~n~i~~~-----------~~~~~l~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~~-~~~ 153 (347)
T 4fmz_A 88 VKLTNLYIGTNKITDI-----------SALQNLTNLRELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLSP-LSN 153 (347)
T ss_dssp TTCCEEECCSSCCCCC-----------GGGTTCTTCSEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCGG-GTT
T ss_pred CcCCEEEccCCcccCc-----------hHHcCCCcCCEEECcCCcccCchh--hccCCceeEEECCCCCCcccccc-hhh
Confidence 5788999998876531 247899999999999999987644 89999999999999977665554 999
Q ss_pred CCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEc
Q 003926 154 LTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDL 233 (786)
Q Consensus 154 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L 233 (786)
+++|++|++++|.+.+..+ +..+++|+.|++++|.+.+..+ +..+++|+.|++++|.+++..+ +..+++|+.|++
T Consensus 154 l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~-~~~~~~L~~L~l 228 (347)
T 4fmz_A 154 MTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP-VANMTRLNSLKI 228 (347)
T ss_dssp CTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-GGGCTTCCEEEC
T ss_pred CCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch-hhcCCcCCEEEc
Confidence 9999999999999986544 8999999999999999986433 8899999999999999987655 889999999999
Q ss_pred ccCCCCCCCC-ccccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccC
Q 003926 234 ENNALGPQFP-KVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLF 312 (786)
Q Consensus 234 ~~N~l~~~~p-~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~ 312 (786)
++|.+++..+ ...++|+.|++++|.+++. ..+..+++|+.|++++|++++. +.+..+++|+.|++++|++++..+
T Consensus 229 ~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~ 304 (347)
T 4fmz_A 229 GNNKITDLSPLANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDM 304 (347)
T ss_dssp CSSCCCCCGGGTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGH
T ss_pred cCCccCCCcchhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcCh
Confidence 9999987655 2357899999999999874 4688999999999999999975 468999999999999999999999
Q ss_pred ccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccC
Q 003926 313 DDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLA 356 (786)
Q Consensus 313 ~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~ 356 (786)
..+..+++|+.|++++|++++..| +..++++..+++++|.++
T Consensus 305 ~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 305 EVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp HHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred hHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 999999999999999999998777 778899999999999874
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.8e-25 Score=252.36 Aligned_cols=256 Identities=23% Similarity=0.299 Sum_probs=140.3
Q ss_pred CCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccC
Q 003926 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSI 153 (786)
Q Consensus 74 ~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 153 (786)
.+++.|+++++.+.+.. + +.++++|++|+|++|.+.+..+ ++++++|++|+|++|.+++..+ +.+
T Consensus 68 ~~L~~L~Ls~n~l~~~~----------~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~ 132 (466)
T 1o6v_A 68 NNLTQINFSNNQLTDIT----------P-LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKN 132 (466)
T ss_dssp TTCCEEECCSSCCCCCG----------G-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTT
T ss_pred cCCCEEECCCCccCCch----------h-hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcC
Confidence 46778888877655432 1 5567777777777777766554 6777777777777777765432 667
Q ss_pred CCCCcEEEcccccCCCCCCc--------------------ccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCC
Q 003926 154 LTSLQTLILDENMLAGRVPD--------------------WLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNN 213 (786)
Q Consensus 154 l~~L~~L~L~~N~l~~~~p~--------------------~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 213 (786)
+++|++|+|++|.+++ +|. .+.++++|+.|++++|.+.+. ..+..+++|+.|++++|
T Consensus 133 l~~L~~L~l~~n~l~~-~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n 209 (466)
T 1o6v_A 133 LTNLNRLELSSNTISD-ISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNN 209 (466)
T ss_dssp CTTCSEEEEEEEEECC-CGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSS
T ss_pred CCCCCEEECCCCccCC-ChhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCC
Confidence 7777777777776654 221 134444455555555554432 22444555555555555
Q ss_pred cCCcCCCCCCCCCcCCEEEcccCCCCCCCCc--cccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhh
Q 003926 214 HFYGEVPDFSGLTYLQVLDLENNALGPQFPK--VGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQAL 291 (786)
Q Consensus 214 ~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~--~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 291 (786)
.+++..| ++.+++|+.|++++|.+++. +. ..++|+.|++++|.+++..| +..+++|+.|+|++|++++..| +
T Consensus 210 ~l~~~~~-~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~ 283 (466)
T 1o6v_A 210 QISDITP-LGILTNLDELSLNGNQLKDI-GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--L 283 (466)
T ss_dssp CCCCCGG-GGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--G
T ss_pred ccccccc-ccccCCCCEEECCCCCcccc-hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--c
Confidence 5544333 44445555555555554432 11 12445555555555554433 5555555555555555554332 5
Q ss_pred CCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 292 LSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 292 ~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
..+++|+.|++++|++++..+ +..+++|+.|++++|++++..| +..+.+++.+++++|.+.+
T Consensus 284 ~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~ 345 (466)
T 1o6v_A 284 AGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSD 345 (466)
T ss_dssp TTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCC
T ss_pred cCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCC
Confidence 555555555555555554433 4455555555555555555444 3445555555555555543
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.8e-25 Score=233.71 Aligned_cols=224 Identities=21% Similarity=0.169 Sum_probs=195.3
Q ss_pred CEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCC
Q 003926 110 KVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNN 189 (786)
Q Consensus 110 ~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 189 (786)
+.++.+++++... |..+ .++|+.|+|++|.+++..+..|..+++|++|+|++|.+++..|..|..+++|++|+|++|
T Consensus 14 ~~~~c~~~~l~~i-p~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQAV-PVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCSSC-CTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcccC-CcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 5788888888654 4333 468999999999999888888999999999999999999888889999999999999999
Q ss_pred c-CcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhh
Q 003926 190 M-FNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEV 267 (786)
Q Consensus 190 ~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~ 267 (786)
. +....|..|..+++|++|+|++|.+++..|. |.++++|++|+|++|.++ +..+..|
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~---------------------~~~~~~~ 149 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ---------------------ALPDDTF 149 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCC---------------------CCCTTTT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCccc---------------------ccCHhHh
Confidence 7 7776688899999999999999999887664 778888888888877764 3445567
Q ss_pred cCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcE
Q 003926 268 SSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRV 347 (786)
Q Consensus 268 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~ 347 (786)
..+++|+.|+|++|++++..+..|..+++|+.|++++|++++..|..+..+++|+.|++++|.+++..+..+....++..
T Consensus 150 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 229 (285)
T 1ozn_A 150 RDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQY 229 (285)
T ss_dssp TTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCE
T ss_pred ccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCE
Confidence 88999999999999999877778999999999999999999999999999999999999999999877777888999999
Q ss_pred EEcCCcccCC
Q 003926 348 VLYARNCLAA 357 (786)
Q Consensus 348 ~~~~~N~l~~ 357 (786)
+++++|.+.+
T Consensus 230 L~l~~N~~~c 239 (285)
T 1ozn_A 230 LRLNDNPWVC 239 (285)
T ss_dssp EECCSSCEEC
T ss_pred EeccCCCccC
Confidence 9999998865
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.6e-27 Score=273.78 Aligned_cols=182 Identities=9% Similarity=0.053 Sum_probs=127.1
Q ss_pred ccCCCCCceeEEEE-ecCCcEEEEEEecccCC----------CChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCCC
Q 003926 484 FMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKC----------HSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 484 ~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~----------~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~~ 551 (786)
..+.|++|.+++++ .-.|+.||||++..... ...++|.+|+++|+++ .|+||+++++++.+
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed------- 313 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGEN------- 313 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEEC-------
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEE-------
Confidence 46778888777765 34589999999975421 1135699999999999 79999999998865
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
.+..||||||++||+|.++|.+. ..++.. +|+.||+.||+|+|+. +||||||||+|||+++++.+||+|||
T Consensus 314 ~~~~yLVMEyv~G~~L~d~i~~~---~~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFG 384 (569)
T 4azs_A 314 AQSGWLVMEKLPGRLLSDMLAAG---EEIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFG 384 (569)
T ss_dssp SSEEEEEEECCCSEEHHHHHHTT---CCCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEecCCCCcHHHHHHhC---CCCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecc
Confidence 46799999999999999999864 245543 4889999999999998 99999999999999999999999999
Q ss_pred cccccccc-cccccccccccccCccccccCCCCcccceeehhHHHHHHHhCC
Q 003926 632 LPLLAENA-EKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR 682 (786)
Q Consensus 632 l~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~ 682 (786)
+++..... ......+|+.+|++||.+. +.+..++|+||+|++++++.+|.
T Consensus 385 lAr~~~~~~~~~~t~vGTp~YmAPE~l~-g~~~~~~d~~s~g~~~~~l~~~~ 435 (569)
T 4azs_A 385 SIVTTPQDCSWPTNLVQSFFVFVNELFA-ENKSWNGFWRSAPVHPFNLPQPW 435 (569)
T ss_dssp TEESCC---CCSHHHHHHHHHHHHHHC------------------CCCCTTH
T ss_pred cCeeCCCCCccccCceechhhccHHHhC-CCCCCcccccccccchhhhcccc
Confidence 99765432 2334567889999999875 46778999999999988886653
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=99.93 E-value=3.5e-25 Score=249.96 Aligned_cols=256 Identities=23% Similarity=0.265 Sum_probs=165.9
Q ss_pred CCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccC
Q 003926 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSI 153 (786)
Q Consensus 74 ~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 153 (786)
.+++.|++.++.+.. +| .+..+++|++|+|++|.+.+..+ +.++++|++|+|++|.+++..| +.+
T Consensus 46 ~~l~~L~l~~~~i~~-l~----------~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~ 110 (466)
T 1o6v_A 46 DQVTTLQADRLGIKS-ID----------GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LAN 110 (466)
T ss_dssp HTCCEEECCSSCCCC-CT----------TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTT
T ss_pred ccccEEecCCCCCcc-Cc----------chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcC
Confidence 367888888876542 22 36689999999999999988765 9999999999999999997655 999
Q ss_pred CCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCE---------------------EEccC
Q 003926 154 LTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRV---------------------LALSN 212 (786)
Q Consensus 154 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~---------------------L~Ls~ 212 (786)
+++|++|+|++|.+++..+ +..+++|++|++++|.+.+ ++ .++++++|+. |++++
T Consensus 111 l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~ 186 (466)
T 1o6v_A 111 LTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISS 186 (466)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCS
T ss_pred CCCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecCCcccCchhhccCCCCCEEECcC
Confidence 9999999999999986543 9999999999999999886 33 3555555554 45555
Q ss_pred CcCCcCCCCCCCCCcCCEEEcccCCCCCCCCc-cccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhh
Q 003926 213 NHFYGEVPDFSGLTYLQVLDLENNALGPQFPK-VGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQAL 291 (786)
Q Consensus 213 N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~-~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 291 (786)
|.+++ ++.+..+++|++|++++|.+.+..|. ..++|+.|++++|.+++. ..+..+++|+.|++++|.+.+..| +
T Consensus 187 n~l~~-~~~l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~ 261 (466)
T 1o6v_A 187 NKVSD-ISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--L 261 (466)
T ss_dssp SCCCC-CGGGGGCTTCSEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--G
T ss_pred CcCCC-ChhhccCCCCCEEEecCCcccccccccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--h
Confidence 54443 23344455555555555555444331 124455555555555432 234555555555555555554433 5
Q ss_pred CCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 292 LSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 292 ~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
..+++|+.|++++|++++..+ +..+++|+.|++++|++++..| +..+.+++.+++++|.+.+
T Consensus 262 ~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~ 323 (466)
T 1o6v_A 262 SGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISD 323 (466)
T ss_dssp TTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSC
T ss_pred hcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCC
Confidence 555555555555555554433 4555555555555555554333 4445555555555555544
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.8e-25 Score=230.74 Aligned_cols=215 Identities=25% Similarity=0.288 Sum_probs=123.8
Q ss_pred CCCCCCCCCCCccEEeCCCCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCE
Q 003926 56 TEFCNTEPTSSLTVVCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEI 135 (786)
Q Consensus 56 ~~~C~w~~~~~~~v~c~~~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~ 135 (786)
.++|.|.| ..+.|. ..++.++++++.++. +|. .+. ++|+.|+|++|++.+..+..|.++++|++
T Consensus 2 ~~~C~~~~---~~C~c~-~~~~~l~~~~~~l~~-ip~---------~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~ 65 (270)
T 2o6q_A 2 EALCKKDG---GVCSCN-NNKNSVDCSSKKLTA-IPS---------NIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRL 65 (270)
T ss_dssp CCCBGGGT---CSBEEE-TTTTEEECTTSCCSS-CCS---------CCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCE
T ss_pred CccCCCCC---CCCEeC-CCCCEEEccCCCCCc-cCC---------CCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCE
Confidence 47899975 234453 345567777766553 332 111 45677777777777666666777777777
Q ss_pred EeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcC
Q 003926 136 LNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHF 215 (786)
Q Consensus 136 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 215 (786)
|+|++|.++...+..|.++++|++|+|++|++++..+..|..+++|++|+|++|.+++..+..|.++++|+.|+|++|.+
T Consensus 66 L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l 145 (270)
T 2o6q_A 66 LYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNEL 145 (270)
T ss_dssp EECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcC
Confidence 77777777655555566677777777777776655555666666666666666666665555566666666666666666
Q ss_pred CcCCCC-CCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCC
Q 003926 216 YGEVPD-FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSL 294 (786)
Q Consensus 216 ~~~~p~-~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 294 (786)
++..+. |..+++|+.|+|++|.++ +..+..|..+++|+.|+|++|+|++..+..|..+
T Consensus 146 ~~~~~~~~~~l~~L~~L~L~~n~l~---------------------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 204 (270)
T 2o6q_A 146 QSLPKGVFDKLTSLKELRLYNNQLK---------------------RVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSL 204 (270)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCS---------------------CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTC
T ss_pred CccCHhHccCCcccceeEecCCcCc---------------------EeChhHhccCCCcCEEECCCCcCCcCCHHHhccc
Confidence 554433 445555555555444432 2222234444445555555554444333344444
Q ss_pred CCCcEEEeecCCC
Q 003926 295 PSITYLNIADNKL 307 (786)
Q Consensus 295 ~~L~~L~l~~N~l 307 (786)
++|+.|+|++|.+
T Consensus 205 ~~L~~L~l~~N~~ 217 (270)
T 2o6q_A 205 EKLKMLQLQENPW 217 (270)
T ss_dssp TTCCEEECCSSCB
T ss_pred cCCCEEEecCCCe
Confidence 4444444444443
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=99.93 E-value=6e-25 Score=246.32 Aligned_cols=225 Identities=29% Similarity=0.391 Sum_probs=145.8
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEc
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 186 (786)
++|++|+|++|.+++ +| .|+++++|++|++++|++++ +|..+ .+|++|+|++|++++ +| .++++++|+.|++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l 202 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYA 202 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEEC
Confidence 577777777777776 55 47777777777777777775 45432 477777777777765 45 4677777777777
Q ss_pred cCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhh
Q 003926 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAE 266 (786)
Q Consensus 187 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~ 266 (786)
++|.+++ +|... ++|+.|++++|.++ .+|.++.+++|++|++++|++++ +|....+|+.|++++|++++ +|..
T Consensus 203 ~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp~~~~l~~L~~L~l~~N~l~~-l~~~~~~L~~L~l~~N~l~~-l~~~ 275 (454)
T 1jl5_A 203 DNNSLKK-LPDLP---LSLESIVAGNNILE-ELPELQNLPFLTTIYADNNLLKT-LPDLPPSLEALNVRDNYLTD-LPEL 275 (454)
T ss_dssp CSSCCSS-CCCCC---TTCCEEECCSSCCS-SCCCCTTCTTCCEEECCSSCCSS-CCSCCTTCCEEECCSSCCSC-CCCC
T ss_pred CCCcCCc-CCCCc---CcccEEECcCCcCC-cccccCCCCCCCEEECCCCcCCc-ccccccccCEEECCCCcccc-cCcc
Confidence 7777765 44322 46666777777666 45566666667777776666654 33344556666666666654 3322
Q ss_pred hcCccccceeeccCccccC--CCchhh-------------CCC-CCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCc
Q 003926 267 VSSYYQLQRLDLSSNRFVG--PFPQAL-------------LSL-PSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNL 330 (786)
Q Consensus 267 ~~~l~~L~~L~Ls~N~l~~--~~p~~~-------------~~l-~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~ 330 (786)
+++|+.|++++|++++ .+|..+ ..+ ++|+.|++++|++++ +|.. +++|+.|++++|+
T Consensus 276 ---~~~L~~L~ls~N~l~~l~~~~~~L~~L~l~~N~l~~i~~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~ 348 (454)
T 1jl5_A 276 ---PQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNH 348 (454)
T ss_dssp ---CTTCCEEECCSSCCSEESCCCTTCCEEECCSSCCSEECCCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSC
T ss_pred ---cCcCCEEECcCCccCcccCcCCcCCEEECcCCcCCcccCCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCc
Confidence 2445555555555544 222211 123 478888888888886 5543 4788899999998
Q ss_pred CCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 331 LTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 331 l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
++ .+|. ....++.+++++|.+++
T Consensus 349 l~-~lp~---~l~~L~~L~L~~N~l~~ 371 (454)
T 1jl5_A 349 LA-EVPE---LPQNLKQLHVEYNPLRE 371 (454)
T ss_dssp CS-CCCC---CCTTCCEEECCSSCCSS
T ss_pred cc-cccc---hhhhccEEECCCCCCCc
Confidence 88 4666 35678889999998887
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.8e-25 Score=258.32 Aligned_cols=272 Identities=25% Similarity=0.286 Sum_probs=170.8
Q ss_pred CCCCCCCCCCCCCCCC---CCccEEeCCCCEEEEEeCCCCCCCCCCCCCc---------CC---ccccccCCCCCCCEEE
Q 003926 49 LSSWNITTEFCNTEPT---SSLTVVCYEESITQLHIVGNKRAPMLPLSFS---------MD---SFVTTLVKLPDLKVLR 113 (786)
Q Consensus 49 l~~W~~~~~~C~w~~~---~~~~v~c~~~~v~~l~l~~~~~~~~l~~~~~---------~~---~~~~~l~~l~~L~~L~ 113 (786)
.++|..+.+||.|.+. ....+.|....++.|+++++.++ .+|..+. .+ .+|. .+++|++|+
T Consensus 12 w~~W~~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~~~L~~L~L~~N~l~~lp~---~l~~L~~L~ 87 (622)
T 3g06_A 12 WSAWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLPAHITTLVIPDNNLTSLPA---LPPELRTLE 87 (622)
T ss_dssp HHHHHHTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCCTTCSEEEECSCCCSCCCC---CCTTCCEEE
T ss_pred HHHHHhcCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhCCCCcEEEecCCCCCCCCC---cCCCCCEEE
Confidence 3567766788888531 11123454556888898888766 4443211 00 1111 344555555
Q ss_pred ccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcc
Q 003926 114 LVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNG 193 (786)
Q Consensus 114 L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 193 (786)
|++|.+++ +|. .+++|++|+|++|.+++. |. .+++|+.|+|++|++++ +|.. +++|++|+|++|.+++
T Consensus 88 Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~l-~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~ 155 (622)
T 3g06_A 88 VSGNQLTS-LPV---LPPGLLELSIFSNPLTHL-PA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS 155 (622)
T ss_dssp ECSCCCSC-CCC---CCTTCCEEEECSCCCCCC-CC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC
T ss_pred cCCCcCCc-CCC---CCCCCCEEECcCCcCCCC-CC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC
Confidence 55555543 222 445555555555555532 22 34555555555555543 3332 2555555555555553
Q ss_pred cCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhhcCcccc
Q 003926 194 TLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQL 273 (786)
Q Consensus 194 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L 273 (786)
+|. .+++|+.|++++|.+++ +| ..+++|+.|+|++|.+++ +|....+|+.|++++|.++. +|. .+++|
T Consensus 156 -l~~---~~~~L~~L~L~~N~l~~-l~--~~~~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~-l~~---~~~~L 223 (622)
T 3g06_A 156 -LPA---LPSELCKLWAYNNQLTS-LP--MLPSGLQELSVSDNQLAS-LPTLPSELYKLWAYNNRLTS-LPA---LPSGL 223 (622)
T ss_dssp -CCC---CCTTCCEEECCSSCCSC-CC--CCCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSS-CCC---CCTTC
T ss_pred -cCC---ccCCCCEEECCCCCCCC-Cc--ccCCCCcEEECCCCCCCC-CCCccchhhEEECcCCcccc-cCC---CCCCC
Confidence 232 23445555555555554 22 334778888888888875 45556778888888888864 443 24779
Q ss_pred ceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCc
Q 003926 274 QRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARN 353 (786)
Q Consensus 274 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N 353 (786)
+.|+|++|+|++ +| ..+++|+.|+|++|+|++ +|. .+++|+.|+|++|+|+ .+|..+..++++..+++++|
T Consensus 224 ~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N 294 (622)
T 3g06_A 224 KELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGN 294 (622)
T ss_dssp CEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSC
T ss_pred CEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCC
Confidence 999999999986 55 566889999999999985 454 5678999999999999 78888888899999999999
Q ss_pred ccCC
Q 003926 354 CLAA 357 (786)
Q Consensus 354 ~l~~ 357 (786)
.+++
T Consensus 295 ~l~~ 298 (622)
T 3g06_A 295 PLSE 298 (622)
T ss_dssp CCCH
T ss_pred CCCC
Confidence 8875
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-24 Score=242.11 Aligned_cols=223 Identities=28% Similarity=0.373 Sum_probs=153.0
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEc
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 186 (786)
++|++|++++|.+++. |.. .++|++|+|++|++++ +| .|+++++|++|++++|++++ +|..+ ++|++|++
T Consensus 111 ~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L 180 (454)
T 1jl5_A 111 QSLKSLLVDNNNLKAL-SDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAA 180 (454)
T ss_dssp TTCCEEECCSSCCSCC-CSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEEC
T ss_pred CCCcEEECCCCccCcc-cCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEEC
Confidence 6778888888877663 211 1678888888888876 66 58888888888888888875 55433 47888888
Q ss_pred cCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCcc--ccchhhhhccCCccCCcCh
Q 003926 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKV--GKKLVTMILSKNKFRSAIP 264 (786)
Q Consensus 187 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~--~~~L~~L~ls~N~l~~~~p 264 (786)
++|.+++ +| .|+++++|+.|++++|.+++ +|.+ .++|++|++++|.++ .+|.. .++|+.|++++|++++ +|
T Consensus 181 ~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~--~~~L~~L~l~~n~l~-~lp~~~~l~~L~~L~l~~N~l~~-l~ 253 (454)
T 1jl5_A 181 GNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDL--PLSLESIVAGNNILE-ELPELQNLPFLTTIYADNNLLKT-LP 253 (454)
T ss_dssp CSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCC--CTTCCEEECCSSCCS-SCCCCTTCTTCCEEECCSSCCSS-CC
T ss_pred cCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCC--cCcccEEECcCCcCC-cccccCCCCCCCEEECCCCcCCc-cc
Confidence 8888876 55 57888888888888888876 3332 247888888888877 45543 3577888888888875 44
Q ss_pred hhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCc--ccCccCC-------------CC-CCCCEEeCcC
Q 003926 265 AEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTG--KLFDDLS-------------CN-PELGFVDLSS 328 (786)
Q Consensus 265 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g--~~~~~~~-------------~~-~~L~~l~ls~ 328 (786)
.. +++|+.|++++|++++ +|.. +++|+.|++++|++++ .+|..+. .+ ++|+.|++++
T Consensus 254 ~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l~~~~~~L~~L~l~~N~l~~i~~~~~~L~~L~Ls~ 326 (454)
T 1jl5_A 254 DL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSN 326 (454)
T ss_dssp SC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEESCCCTTCCEEECCSSCCSEECCCCTTCCEEECCS
T ss_pred cc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcccCcCCcCCEEECcCCcCCcccCCcCcCCEEECCC
Confidence 32 3678888888888876 4543 3667777777777766 3332221 12 4677777777
Q ss_pred CcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 329 NLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 329 N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
|++++ +|.. ...++.+++++|.++.
T Consensus 327 N~l~~-lp~~---~~~L~~L~L~~N~l~~ 351 (454)
T 1jl5_A 327 NKLIE-LPAL---PPRLERLIASFNHLAE 351 (454)
T ss_dssp SCCSC-CCCC---CTTCCEEECCSSCCSC
T ss_pred Ccccc-cccc---CCcCCEEECCCCcccc
Confidence 77775 5554 3567778888887764
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=6.7e-25 Score=229.65 Aligned_cols=208 Identities=23% Similarity=0.161 Sum_probs=171.4
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEc
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 186 (786)
++|++|+|++|++++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 47899999999999888888999999999999999999888888999999999999999999888889999999999999
Q ss_pred cCCcCcccCCccccCCCCCCEEEccCCcCCcC-CC-CCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcCh
Q 003926 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYGE-VP-DFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIP 264 (786)
Q Consensus 187 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p-~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p 264 (786)
++|.+.+..+..|+++++|+.|+|++|.+++. +| .|..+++|++|+|++|.+++ ..+
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~---------------------~~~ 166 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS---------------------IYC 166 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCE---------------------ECG
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCc---------------------CCH
Confidence 99999987777899999999999999999873 35 48888888888888887753 333
Q ss_pred hhhcCccccc----eeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCC
Q 003926 265 AEVSSYYQLQ----RLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLP 336 (786)
Q Consensus 265 ~~~~~l~~L~----~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p 336 (786)
..+..+.+|+ .|++++|++++..+..+ ...+|+.|++++|++++..+..+..+++|+.|++++|++++..|
T Consensus 167 ~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~-~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 167 TDLRVLHQMPLLNLSLDLSLNPMNFIQPGAF-KEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp GGGHHHHTCTTCCEEEECCSSCCCEECTTSS-CSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred HHhhhhhhccccceeeecCCCcccccCcccc-CCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 4444444454 78888888886555444 44578888888888887777777888888888888888887655
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.92 E-value=6.1e-27 Score=250.38 Aligned_cols=241 Identities=23% Similarity=0.222 Sum_probs=203.1
Q ss_pred cCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCC
Q 003926 103 LVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILA 182 (786)
Q Consensus 103 l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 182 (786)
+..+++|++|+|++|.+++..|..|.++++|+.|+|++|.+++..| +..+++|++|+|++|++++.. .+++|+
T Consensus 30 ~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~-----~~~~L~ 102 (317)
T 3o53_A 30 RQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIE 102 (317)
T ss_dssp HTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE-----ECTTCC
T ss_pred hccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc-----CCCCcC
Confidence 4467899999999999999988999999999999999999987665 999999999999999997533 348999
Q ss_pred EEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCC-CCCCCCcCCEEEcccCCCCCCCCcc----ccchhhhhccCC
Q 003926 183 VLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVP-DFSGLTYLQVLDLENNALGPQFPKV----GKKLVTMILSKN 257 (786)
Q Consensus 183 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~p~~----~~~L~~L~ls~N 257 (786)
.|++++|.+++..+. .+++|+.|++++|++++..+ .+..+++|++|+|++|.+++..+.. .++|+.|++++|
T Consensus 103 ~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N 179 (317)
T 3o53_A 103 TLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYN 179 (317)
T ss_dssp EEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTS
T ss_pred EEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCC
Confidence 999999999976554 36789999999999998776 4888999999999999998765543 368999999999
Q ss_pred ccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCC-ccCC
Q 003926 258 KFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLT-GQLP 336 (786)
Q Consensus 258 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~-g~~p 336 (786)
.+++. | ....+++|+.|+|++|+|++. |..+..+++|+.|+|++|++++ +|..+..+++|+.|++++|.++ +.+|
T Consensus 180 ~l~~~-~-~~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N~~~~~~~~ 255 (317)
T 3o53_A 180 FIYDV-K-GQVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLR 255 (317)
T ss_dssp CCCEE-E-CCCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCCBHHHHH
T ss_pred cCccc-c-cccccccCCEEECCCCcCCcc-hhhhcccCcccEEECcCCcccc-hhhHhhcCCCCCEEEccCCCccCcCHH
Confidence 99876 3 234588999999999999964 5558999999999999999995 6778889999999999999998 7788
Q ss_pred hhhhcCCCCcEEEcCCc-ccCC
Q 003926 337 NCLLAGSKNRVVLYARN-CLAA 357 (786)
Q Consensus 337 ~~~~~~~~~~~~~~~~N-~l~~ 357 (786)
..+.....+..+.+..| .+.|
T Consensus 256 ~~~~~~~~L~~l~l~~~~~l~~ 277 (317)
T 3o53_A 256 DFFSKNQRVQTVAKQTVKKLTG 277 (317)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHS
T ss_pred HHHhccccceEEECCCchhccC
Confidence 88777766666666633 3444
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.92 E-value=8.8e-25 Score=228.22 Aligned_cols=207 Identities=25% Similarity=0.243 Sum_probs=158.0
Q ss_pred cCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCC
Q 003926 103 LVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILA 182 (786)
Q Consensus 103 l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 182 (786)
+..+++|+.|++++|.+... ..+..+++|++|+|++|.+++. +.+..+++|++|+|++|.+++..+..|..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 112 (272)
T 3rfs_A 37 QNELNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLK 112 (272)
T ss_dssp HHHHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccccceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCC
Confidence 44667777888887777643 2467777888888888887763 3677777888888888887776666777778888
Q ss_pred EEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCC
Q 003926 183 VLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRS 261 (786)
Q Consensus 183 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~ 261 (786)
+|+|++|.+++..+..|+++++|++|+|++|++++.++. |..+++|+.|+|++|+++ +
T Consensus 113 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~---------------------~ 171 (272)
T 3rfs_A 113 ELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQ---------------------S 171 (272)
T ss_dssp EEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC---------------------C
T ss_pred EEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcC---------------------c
Confidence 888888877776666677777788888887777766554 567777777777666654 4
Q ss_pred cChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhc
Q 003926 262 AIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLA 341 (786)
Q Consensus 262 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~ 341 (786)
..+..+..+++|+.|+|++|++++..|..+..+++|+.|++++|.+.+. ++.|+.++++.|.++|.+|..++.
T Consensus 172 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~ 244 (272)
T 3rfs_A 172 LPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGS 244 (272)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSC
T ss_pred cCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcccc
Confidence 4555677888999999999999988888888999999999999988764 446888899999999999987654
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.4e-24 Score=249.58 Aligned_cols=244 Identities=19% Similarity=0.199 Sum_probs=150.8
Q ss_pred CCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEcc
Q 003926 108 DLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLR 187 (786)
Q Consensus 108 ~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 187 (786)
+|++|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|+++
T Consensus 29 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 108 (570)
T 2z63_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (570)
T ss_dssp SCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred cccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccccc
Confidence 46666666666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred CCcCcccCCccccCCCCCCEEEccCCcCCc-CCC-CCCCCCcCCEEEcccCCCCCCCCccc---cch----hhhhccCCc
Q 003926 188 NNMFNGTLPDSFSYLENLRVLALSNNHFYG-EVP-DFSGLTYLQVLDLENNALGPQFPKVG---KKL----VTMILSKNK 258 (786)
Q Consensus 188 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p-~~~~l~~L~~L~L~~N~l~~~~p~~~---~~L----~~L~ls~N~ 258 (786)
+|.+++..+..|+++++|++|+|++|.+++ .+| .|+++++|++|++++|.+++..+... .+| ..+++++|.
T Consensus 109 ~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~ 188 (570)
T 2z63_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (570)
T ss_dssp TSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCC
T ss_pred ccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCC
Confidence 666665444456666666666666666665 234 36666666666666666665554432 233 445666666
Q ss_pred cCCcChhhhcCccccceeeccCc---------------------------------------------------------
Q 003926 259 FRSAIPAEVSSYYQLQRLDLSSN--------------------------------------------------------- 281 (786)
Q Consensus 259 l~~~~p~~~~~l~~L~~L~Ls~N--------------------------------------------------------- 281 (786)
+++..|..+... +|+.|+|++|
T Consensus 189 l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~ 267 (570)
T 2z63_A 189 MNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYL 267 (570)
T ss_dssp CCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEET
T ss_pred ceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcc
Confidence 666555555444 4555555554
Q ss_pred -cccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 282 -RFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 282 -~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
.+.+.+|..+..+++|+.|++++|.++ .+|..+..+ +|+.|++++|.++ .+|. .....++.+.+.+|.+.+
T Consensus 268 ~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~ 339 (570)
T 2z63_A 268 DYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGN 339 (570)
T ss_dssp TEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCC
T ss_pred hhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCc--ccccccCEEeCcCCcccc
Confidence 344455566666666777777766666 355555555 6666666666666 4554 244556666666665543
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-25 Score=240.41 Aligned_cols=236 Identities=20% Similarity=0.164 Sum_probs=204.5
Q ss_pred CCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEcc
Q 003926 108 DLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLR 187 (786)
Q Consensus 108 ~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 187 (786)
+++.++++.+.+...+...+..+++|+.|+|++|.+++..|..|..+++|++|+|++|.+++..| |..+++|++|+|+
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 45667788888877777777888999999999999999888999999999999999999987665 9999999999999
Q ss_pred CCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCcc---ccchhhhhccCCccCCcCh
Q 003926 188 NNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKV---GKKLVTMILSKNKFRSAIP 264 (786)
Q Consensus 188 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~---~~~L~~L~ls~N~l~~~~p 264 (786)
+|.+++.. ..++|+.|++++|.+++..+. .+++|+.|++++|.+++..+.. .++|+.|++++|.+++..|
T Consensus 89 ~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~--~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 161 (317)
T 3o53_A 89 NNYVQELL-----VGPSIETLHAANNNISRVSCS--RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNF 161 (317)
T ss_dssp SSEEEEEE-----ECTTCCEEECCSSCCSEEEEC--CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEG
T ss_pred CCcccccc-----CCCCcCEEECCCCccCCcCcc--ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccH
Confidence 99998633 348999999999999887654 3688999999999998876644 4789999999999999888
Q ss_pred hhh-cCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCC
Q 003926 265 AEV-SSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGS 343 (786)
Q Consensus 265 ~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~ 343 (786)
..+ ..+++|+.|+|++|+|++. |. ...+++|+.|+|++|++++..+ .+..+++|+.|+|++|+++ .+|..+....
T Consensus 162 ~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l~~-~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~ 237 (317)
T 3o53_A 162 AELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLV-LIEKALRFSQ 237 (317)
T ss_dssp GGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCC-EECTTCCCCT
T ss_pred HHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCcchh-hhcccCcccEEECcCCccc-chhhHhhcCC
Confidence 777 4789999999999999865 33 3459999999999999997544 5888999999999999999 5788888888
Q ss_pred CCcEEEcCCcccC
Q 003926 344 KNRVVLYARNCLA 356 (786)
Q Consensus 344 ~~~~~~~~~N~l~ 356 (786)
++..+++++|.+.
T Consensus 238 ~L~~L~l~~N~~~ 250 (317)
T 3o53_A 238 NLEHFDLRGNGFH 250 (317)
T ss_dssp TCCEEECTTCCCB
T ss_pred CCCEEEccCCCcc
Confidence 9999999999886
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-23 Score=218.70 Aligned_cols=203 Identities=23% Similarity=0.236 Sum_probs=167.1
Q ss_pred CCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEcc
Q 003926 108 DLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLR 187 (786)
Q Consensus 108 ~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 187 (786)
+++.+++++++++. +|..+. ++|+.|+|++|++++..+..|.++++|++|+|++|.++...+..|..+++|++|+|+
T Consensus 17 ~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 57789999998875 455443 678999999999988777788899999999999999886666677888999999999
Q ss_pred CCcCcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhh
Q 003926 188 NNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAE 266 (786)
Q Consensus 188 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~ 266 (786)
+|.+++..+..|.++++|+.|+|++|++++..+. |..+++|++|+|++|.++ +..+..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~---------------------~~~~~~ 152 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ---------------------SLPKGV 152 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC---------------------CCCTTT
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCC---------------------ccCHhH
Confidence 9998877777788888899999999888877665 678888888888777664 333445
Q ss_pred hcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCcc
Q 003926 267 VSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQ 334 (786)
Q Consensus 267 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ 334 (786)
|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|.+...
T Consensus 153 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 153 FDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp TTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred ccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCC
Confidence 77888999999999999987777888999999999999999987777788888999999999988654
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.2e-25 Score=252.27 Aligned_cols=195 Identities=24% Similarity=0.175 Sum_probs=142.8
Q ss_pred CCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEE
Q 003926 130 LSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLA 209 (786)
Q Consensus 130 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 209 (786)
+++|+.|+|++|.+++..|..|..+++|++|+|++|.+++.+| |+.+++|++|+|++|.+++..+ .++|+.|+
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~ 105 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLH 105 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEE
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEE
Confidence 3466667777666666666666666666666666666665444 6666666666666666554221 24555555
Q ss_pred ccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCch
Q 003926 210 LSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQ 289 (786)
Q Consensus 210 Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 289 (786)
|++|.+++. .+..+++|+.|++++|.+++..|..++++++|+.|+|++|.|++.+|.
T Consensus 106 L~~N~l~~~-----------------------~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 162 (487)
T 3oja_A 106 AANNNISRV-----------------------SCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFA 162 (487)
T ss_dssp CCSSCCCCE-----------------------EECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGG
T ss_pred CcCCcCCCC-----------------------CccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChH
Confidence 555555543 333334555556666666677788889999999999999999999998
Q ss_pred hhC-CCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 290 ALL-SLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 290 ~~~-~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
.+. .+++|+.|+|++|.|++..+ ...+++|+.|+|++|.+++..| .+..+..+..+++++|.+++
T Consensus 163 ~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~ 228 (487)
T 3oja_A 163 ELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL 228 (487)
T ss_dssp GGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE
T ss_pred HHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc
Confidence 887 89999999999999998743 3468999999999999997544 58888999999999999986
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-23 Score=220.15 Aligned_cols=221 Identities=19% Similarity=0.166 Sum_probs=187.4
Q ss_pred EccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCc
Q 003926 113 RLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFN 192 (786)
Q Consensus 113 ~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 192 (786)
+..+.++.. +|..+. ++|+.|+|++|.+++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|.++
T Consensus 13 ~c~~~~l~~-ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 89 (276)
T 2z62_A 13 QCMELNFYK-IPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 89 (276)
T ss_dssp ECTTSCCSS-CCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred EecCCCccc-cCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccC
Confidence 333444432 344443 57999999999999888889999999999999999999888889999999999999999999
Q ss_pred ccCCccccCCCCCCEEEccCCcCCcCCC-CCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhhcCcc
Q 003926 193 GTLPDSFSYLENLRVLALSNNHFYGEVP-DFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYY 271 (786)
Q Consensus 193 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~ 271 (786)
+..+..|.++++|++|++++|.+++..+ .+..+++|++|++++|.+++ ..+|..+.+++
T Consensus 90 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~--------------------~~l~~~~~~l~ 149 (276)
T 2z62_A 90 SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQS--------------------FKLPEYFSNLT 149 (276)
T ss_dssp EECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCC--------------------CCCCGGGGGCT
T ss_pred ccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccce--------------------ecCchhhccCC
Confidence 9888899999999999999999988766 48889999999988887642 13577889999
Q ss_pred ccceeeccCccccCCCchhhCCCCCCc----EEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcE
Q 003926 272 QLQRLDLSSNRFVGPFPQALLSLPSIT----YLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRV 347 (786)
Q Consensus 272 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~----~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~ 347 (786)
+|+.|+|++|++++..+..+..+++|+ .|++++|++++..+..+. ..+|+.|++++|++++..+..+....++..
T Consensus 150 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 228 (276)
T 2z62_A 150 NLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQK 228 (276)
T ss_dssp TCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCE
T ss_pred CCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccE
Confidence 999999999999998888887777777 899999999987666654 458999999999999776667778899999
Q ss_pred EEcCCcccCC
Q 003926 348 VLYARNCLAA 357 (786)
Q Consensus 348 ~~~~~N~l~~ 357 (786)
+++++|.+.+
T Consensus 229 L~l~~N~~~c 238 (276)
T 2z62_A 229 IWLHTNPWDC 238 (276)
T ss_dssp EECCSSCBCC
T ss_pred EEccCCcccc
Confidence 9999999876
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.7e-23 Score=218.82 Aligned_cols=203 Identities=26% Similarity=0.252 Sum_probs=141.1
Q ss_pred ccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCC
Q 003926 102 TLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPIL 181 (786)
Q Consensus 102 ~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 181 (786)
.+.++++|+.+++++|+++.. |..+. ++|+.|+|++|.+++..|..|..+++|+.|+|++|.+++..+. +.+++|
T Consensus 5 ~~~~l~~l~~l~~~~~~l~~i-p~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L 79 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLTAL-PPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVL 79 (290)
T ss_dssp EEECSTTCCEEECTTSCCSSC-CSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTC
T ss_pred cccccCCccEEECCCCCCCcC-CCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcC
Confidence 356777888888888888654 43343 5778888888888877777788888888888888887754332 677788
Q ss_pred CEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccC
Q 003926 182 AVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFR 260 (786)
Q Consensus 182 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~ 260 (786)
++|+|++|.++ .+|..+.++++|++|+|++|++++.++. |.++++|++|+|++|+++
T Consensus 80 ~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~--------------------- 137 (290)
T 1p9a_G 80 GTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK--------------------- 137 (290)
T ss_dssp CEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCC---------------------
T ss_pred CEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCC---------------------
Confidence 88888888877 5677777777888888888877766654 677777777777666654
Q ss_pred CcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCC
Q 003926 261 SAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLT 332 (786)
Q Consensus 261 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~ 332 (786)
+..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..++.|+.++|++|.+.
T Consensus 138 ~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 138 TLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred ccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 233334556667777777777776555555666777777777777776 45555555566666666666664
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.6e-25 Score=253.94 Aligned_cols=181 Identities=13% Similarity=0.164 Sum_probs=141.3
Q ss_pred ccCccCCCCCceeEEEEecCCcEEEEEEecccCCCC--------hHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 481 TSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHS--------TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 481 ~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~--------~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
..+.||+|+||+||+|.. .+..+|+|+........ .+.|.+|++++++++||||+++..++.. .
T Consensus 340 ~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~-------~ 411 (540)
T 3en9_A 340 PEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVD-------L 411 (540)
T ss_dssp --------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEE-------T
T ss_pred CCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEe-------C
Confidence 457899999999999954 47889999876543221 2458999999999999999966666553 2
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..|+|||||++|+|.+++.. +..++.|+++||+|||+. +|+||||||+|||++. .+||+|||+
T Consensus 412 ~~~~lVmE~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGl 475 (540)
T 3en9_A 412 DNKRIMMSYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGL 475 (540)
T ss_dssp TTTEEEEECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTT
T ss_pred CccEEEEECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECcc
Confidence 346999999999999999864 457899999999999997 9999999999999999 999999999
Q ss_pred ccccccccc--------cccccccccccCcccccc--CCCCcccceeehhHHHHHHHhCCCCC
Q 003926 633 PLLAENAEK--------VGHVIPYSGSIDPTNSAR--GKLEEKIDIYDFGLILLEIIVGRPLK 685 (786)
Q Consensus 633 ~~~~~~~~~--------~~~~~~~~~~~aPe~~~~--~~~t~ksDVwSfGvvl~ElltG~~p~ 685 (786)
++....... .....++..|+|||.+.. ..|+.++|+||..+-.+|.+.++.++
T Consensus 476 a~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 476 GKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp CEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred CEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 976654321 124567889999999865 55888999999999888888777655
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2.4e-23 Score=217.31 Aligned_cols=205 Identities=26% Similarity=0.266 Sum_probs=176.3
Q ss_pred CCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccC
Q 003926 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSI 153 (786)
Q Consensus 74 ~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 153 (786)
.+++.|++.++.+.. + ..+..+++|++|+|++|.+.+. ..+..+++|++|+|++|.+++..+..|.+
T Consensus 41 ~~L~~L~l~~~~i~~-~----------~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~ 107 (272)
T 3rfs_A 41 NSIDQIIANNSDIKS-V----------QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDK 107 (272)
T ss_dssp TTCCEEECTTSCCCC-C----------TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTT
T ss_pred cceeeeeeCCCCccc-c----------cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcC
Confidence 467888888876442 1 2467899999999999999884 47999999999999999999988888999
Q ss_pred CCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCCCcCCEEE
Q 003926 154 LTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLD 232 (786)
Q Consensus 154 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~ 232 (786)
+++|++|+|++|++++..|..|+.+++|++|+|++|.+++..+..|+++++|+.|+|++|++++.++. |..+++|+.|+
T Consensus 108 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 187 (272)
T 3rfs_A 108 LTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLR 187 (272)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEE
Confidence 99999999999999988888899999999999999999988888899999999999999999987775 68899999999
Q ss_pred cccCCCCCCCCccccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccC
Q 003926 233 LENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLF 312 (786)
Q Consensus 233 L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~ 312 (786)
|++|.++ +..|..+..+++|+.|+|++|.+.+. +++|+.|+++.|+++|.+|
T Consensus 188 L~~N~l~---------------------~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip 239 (272)
T 3rfs_A 188 LYQNQLK---------------------SVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVR 239 (272)
T ss_dssp CCSSCCS---------------------CCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBB
T ss_pred CCCCcCC---------------------ccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCccc
Confidence 8888765 44455577788899999999988754 4578888899999999998
Q ss_pred ccCCCCC
Q 003926 313 DDLSCNP 319 (786)
Q Consensus 313 ~~~~~~~ 319 (786)
..++.++
T Consensus 240 ~~~~~~~ 246 (272)
T 3rfs_A 240 NSAGSVA 246 (272)
T ss_dssp CTTSCBC
T ss_pred CcccccC
Confidence 8876554
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.90 E-value=8.6e-23 Score=214.97 Aligned_cols=205 Identities=24% Similarity=0.189 Sum_probs=175.1
Q ss_pred cCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCC
Q 003926 126 KISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENL 205 (786)
Q Consensus 126 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 205 (786)
.++++++|+.+++++|.++ .+|..+. ++|+.|+|++|.+++..|..|..+++|+.|+|++|.+++..+ .+.+++|
T Consensus 5 ~~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L 79 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVL 79 (290)
T ss_dssp EEECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTC
T ss_pred cccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCcC
Confidence 3677889999999999998 4565553 688999999999988888889999999999999999886543 2788899
Q ss_pred CEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhhcCccccceeeccCccccC
Q 003926 206 RVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVG 285 (786)
Q Consensus 206 ~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 285 (786)
+.|+|++|+++..+..+..+++|++|+|++|+++ +..|..|..+++|+.|+|++|+|++
T Consensus 80 ~~L~Ls~N~l~~l~~~~~~l~~L~~L~l~~N~l~---------------------~l~~~~~~~l~~L~~L~L~~N~l~~ 138 (290)
T 1p9a_G 80 GTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLT---------------------SLPLGALRGLGELQELYLKGNELKT 138 (290)
T ss_dssp CEEECCSSCCSSCCCCTTTCTTCCEEECCSSCCC---------------------CCCSSTTTTCTTCCEEECTTSCCCC
T ss_pred CEEECCCCcCCcCchhhccCCCCCEEECCCCcCc---------------------ccCHHHHcCCCCCCEEECCCCCCCc
Confidence 9999999998855555778888888888777664 4455678889999999999999998
Q ss_pred CCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 286 PFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 286 ~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
..+..|..+++|+.|+|++|+|++..+..+..+++|+.|+|++|+++ .+|..+.....+..+.+.+|.+.+
T Consensus 139 ~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 139 LPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp CCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred cChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 88888999999999999999999877777889999999999999999 788888888899999999998764
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.90 E-value=8e-23 Score=236.23 Aligned_cols=209 Identities=27% Similarity=0.255 Sum_probs=179.4
Q ss_pred CCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEE
Q 003926 105 KLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVL 184 (786)
Q Consensus 105 ~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 184 (786)
.+++|++|+|++|.+++..+ .+++|+.|+|++|++++ +|.. +++|++|+|++|++++ +|. .+++|+.|
T Consensus 99 ~l~~L~~L~Ls~N~l~~l~~----~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L 166 (622)
T 3g06_A 99 LPPGLLELSIFSNPLTHLPA----LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPA---LPSELCKL 166 (622)
T ss_dssp CCTTCCEEEECSCCCCCCCC----CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEE
T ss_pred CCCCCCEEECcCCcCCCCCC----CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEE
Confidence 67899999999999988543 67899999999999986 5543 5899999999999985 454 45789999
Q ss_pred EccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcCh
Q 003926 185 SLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIP 264 (786)
Q Consensus 185 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p 264 (786)
++++|.+++ +| ..+++|+.|+|++|.+++..+ .+++|+.|++++|.++. +|...++|+.|++++|+|++ +|
T Consensus 167 ~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~l~~---~~~~L~~L~L~~N~l~~-l~~~~~~L~~L~Ls~N~L~~-lp 237 (622)
T 3g06_A 167 WAYNNQLTS-LP---MLPSGLQELSVSDNQLASLPT---LPSELYKLWAYNNRLTS-LPALPSGLKELIVSGNRLTS-LP 237 (622)
T ss_dssp ECCSSCCSC-CC---CCCTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCSS-CCCCCTTCCEEECCSSCCSC-CC
T ss_pred ECCCCCCCC-Cc---ccCCCCcEEECCCCCCCCCCC---ccchhhEEECcCCcccc-cCCCCCCCCEEEccCCccCc-CC
Confidence 999999996 66 457899999999999997443 24799999999999984 55667899999999999987 56
Q ss_pred hhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcC
Q 003926 265 AEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAG 342 (786)
Q Consensus 265 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~ 342 (786)
..+++|+.|+|++|+|++ +|. .+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|.+++.+|..+...
T Consensus 238 ---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L 307 (622)
T 3g06_A 238 ---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREI 307 (622)
T ss_dssp ---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHH
T ss_pred ---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhc
Confidence 567899999999999995 665 6789999999999999 678889999999999999999999999877543
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=5.6e-24 Score=226.62 Aligned_cols=222 Identities=20% Similarity=0.188 Sum_probs=157.9
Q ss_pred CCCCCEEEccCCCCccCCCc---cCCCCCCCCEEeccCCCCCCCCCccc--cCCCCCcEEEcccccCCCCCC----cccC
Q 003926 106 LPDLKVLRLVSLGLWGPLSG---KISRLSSLEILNMSSNFLNGAIPQEL--SILTSLQTLILDENMLAGRVP----DWLG 176 (786)
Q Consensus 106 l~~L~~L~L~~n~l~g~~~~---~~~~l~~L~~L~Ls~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~p----~~~~ 176 (786)
-..++.|.+.++.+....-. .+..+++|+.|+|++|.+++..|..+ ..+++|++|+|++|.+++..| ..+.
T Consensus 63 ~~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~ 142 (310)
T 4glp_A 63 ALRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQW 142 (310)
T ss_dssp SCCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTT
T ss_pred hcceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhh
Confidence 34578888888877532110 12235679999999999999999888 899999999999999988666 4456
Q ss_pred CCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcC---CCC--CCCCCcCCEEEcccCCCCCCCC------cc
Q 003926 177 SLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGE---VPD--FSGLTYLQVLDLENNALGPQFP------KV 245 (786)
Q Consensus 177 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~--~~~l~~L~~L~L~~N~l~~~~p------~~ 245 (786)
.+++|++|+|++|.+.+..|..|+++++|++|+|++|++.+. .+. +..+++|++|+|++|+++...+ ..
T Consensus 143 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~ 222 (310)
T 4glp_A 143 LKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAA 222 (310)
T ss_dssp BCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHH
T ss_pred hccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhc
Confidence 789999999999999988888999999999999999998762 222 4678889999998888853211 11
Q ss_pred ccchhhhhccCCccCCcChhhhcCc---cccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCC
Q 003926 246 GKKLVTMILSKNKFRSAIPAEVSSY---YQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELG 322 (786)
Q Consensus 246 ~~~L~~L~ls~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~ 322 (786)
.++|++|+|++|+|++.+|..+..+ ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|++++. |. +..+++|+
T Consensus 223 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~ 297 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVD 297 (310)
T ss_dssp TCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCS
T ss_pred CCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCcc
Confidence 2556666666666666656555555 46666666666666 4555543 5666666666666653 21 34556666
Q ss_pred EEeCcCCcCC
Q 003926 323 FVDLSSNLLT 332 (786)
Q Consensus 323 ~l~ls~N~l~ 332 (786)
.|+|++|+++
T Consensus 298 ~L~L~~N~l~ 307 (310)
T 4glp_A 298 NLTLDGNPFL 307 (310)
T ss_dssp CEECSSTTTS
T ss_pred EEECcCCCCC
Confidence 6666666665
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.89 E-value=6.8e-23 Score=209.54 Aligned_cols=195 Identities=18% Similarity=0.210 Sum_probs=150.1
Q ss_pred CCCEEEccCCCCccCCCccCCCCCCCCEEeccCCC-CCCCCCccccCCCCCcEEEccc-ccCCCCCCcccCCCCCCCEEE
Q 003926 108 DLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNF-LNGAIPQELSILTSLQTLILDE-NMLAGRVPDWLGSLPILAVLS 185 (786)
Q Consensus 108 ~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~ 185 (786)
+|++|+|++|++++..+..|.++++|+.|+|++|. +++..+..|.++++|++|+|++ |++++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 78899999999998888889999999999999997 8877777889999999999998 899877778889999999999
Q ss_pred ccCCcCcccCCccccCCCCCC---EEEccCC-cCCcCCCC-CCCCCcCC-EEEcccCCCCCCCCccccchhhhhccCCcc
Q 003926 186 LRNNMFNGTLPDSFSYLENLR---VLALSNN-HFYGEVPD-FSGLTYLQ-VLDLENNALGPQFPKVGKKLVTMILSKNKF 259 (786)
Q Consensus 186 Ls~N~l~~~~p~~~~~l~~L~---~L~Ls~N-~l~~~~p~-~~~l~~L~-~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l 259 (786)
+++|.+++ +|. |..+++|+ .|++++| .+++..+. |.++++|+ .|++++|.++. +|
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~-i~---------------- 172 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTS-VQ---------------- 172 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCE-EC----------------
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcc-cC----------------
Confidence 99999886 666 88888888 9999998 88776664 78888888 88888877641 11
Q ss_pred CCcChhhhcCccccceeeccCcc-ccCCCchhhCCC-CCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCC
Q 003926 260 RSAIPAEVSSYYQLQRLDLSSNR-FVGPFPQALLSL-PSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSN 329 (786)
Q Consensus 260 ~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l-~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N 329 (786)
+..|.. ++|+.|+|++|+ +++..+..|..+ ++|+.|++++|++++..+. .+++|+.|+++++
T Consensus 173 ----~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 173 ----GYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp ----TTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred ----HhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 112222 567777777773 766556667777 7777777777777644332 4566677776654
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.3e-23 Score=223.68 Aligned_cols=200 Identities=22% Similarity=0.203 Sum_probs=172.8
Q ss_pred CCCCCCEEEccCCCCccCCCccC--CCCCCCCEEeccCCCCCCCCC----ccccCCCCCcEEEcccccCCCCCCcccCCC
Q 003926 105 KLPDLKVLRLVSLGLWGPLSGKI--SRLSSLEILNMSSNFLNGAIP----QELSILTSLQTLILDENMLAGRVPDWLGSL 178 (786)
Q Consensus 105 ~l~~L~~L~L~~n~l~g~~~~~~--~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 178 (786)
.+++|++|+|++|.+.+.+|..+ ..+++|+.|+|++|.+++..+ ..+..+++|++|+|++|.+++..|..|+.+
T Consensus 89 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l 168 (310)
T 4glp_A 89 AYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAF 168 (310)
T ss_dssp HHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCC
T ss_pred ccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccC
Confidence 45779999999999999999998 999999999999999998766 455689999999999999999889999999
Q ss_pred CCCCEEEccCCcCccc--C--CccccCCCCCCEEEccCCcCCcCCCC----CCCCCcCCEEEcccCCCCCCCCcc---c-
Q 003926 179 PILAVLSLRNNMFNGT--L--PDSFSYLENLRVLALSNNHFYGEVPD----FSGLTYLQVLDLENNALGPQFPKV---G- 246 (786)
Q Consensus 179 ~~L~~L~Ls~N~l~~~--~--p~~~~~l~~L~~L~Ls~N~l~~~~p~----~~~l~~L~~L~L~~N~l~~~~p~~---~- 246 (786)
++|++|+|++|++.+. + +..++.+++|++|+|++|+++...+. +..+++|++|+|++|.+++..|.. .
T Consensus 169 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~ 248 (310)
T 4glp_A 169 PALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCM 248 (310)
T ss_dssp TTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCC
T ss_pred CCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhcc
Confidence 9999999999998752 2 23347899999999999999743321 467899999999999999886642 2
Q ss_pred --cchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCc
Q 003926 247 --KKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTG 309 (786)
Q Consensus 247 --~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g 309 (786)
++|+.|++++|+|+ .+|..+. ++|+.|||++|+|++. |. +..+++|+.|+|++|+|+.
T Consensus 249 ~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 249 WSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred CcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 58999999999998 6777764 7999999999999974 43 6888999999999999975
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.89 E-value=4.9e-25 Score=242.48 Aligned_cols=243 Identities=21% Similarity=0.255 Sum_probs=171.4
Q ss_pred cccccCCCCCCCEEEccCCCCccCC----CccCCCCCCCCEEeccCC---CCCCCCCccc-------cCCCCCcEEEccc
Q 003926 99 FVTTLVKLPDLKVLRLVSLGLWGPL----SGKISRLSSLEILNMSSN---FLNGAIPQEL-------SILTSLQTLILDE 164 (786)
Q Consensus 99 ~~~~l~~l~~L~~L~L~~n~l~g~~----~~~~~~l~~L~~L~Ls~N---~l~~~~p~~~-------~~l~~L~~L~L~~ 164 (786)
++..+..+++|++|+|++|.+++.. +..+..+++|+.|+|++| ++++.+|..+ ..+++|++|+|++
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~ 103 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 103 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCC
Confidence 3445667888899999998887763 344778888999998885 4455666555 6788888888888
Q ss_pred ccCCC----CCCcccCCCCCCCEEEccCCcCcccCCcccc----CC---------CCCCEEEccCCcCC-cCCC----CC
Q 003926 165 NMLAG----RVPDWLGSLPILAVLSLRNNMFNGTLPDSFS----YL---------ENLRVLALSNNHFY-GEVP----DF 222 (786)
Q Consensus 165 N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~----~l---------~~L~~L~Ls~N~l~-~~~p----~~ 222 (786)
|.+++ .+|..+..+++|++|+|++|.++...+..+. .+ ++|+.|+|++|+++ +.++ .+
T Consensus 104 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l 183 (386)
T 2ca6_A 104 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTF 183 (386)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHH
Confidence 88876 4677788888888888888888644333333 33 78888888888876 3344 25
Q ss_pred CCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhhcCccccceeeccCcccc----CCCchhhCCCCCCc
Q 003926 223 SGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFV----GPFPQALLSLPSIT 298 (786)
Q Consensus 223 ~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~ 298 (786)
..+++|+.|+|++|.++.. .+...+|..+..+++|+.|+|++|.|+ +.+|..+..+++|+
T Consensus 184 ~~~~~L~~L~L~~n~l~~~----------------g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~ 247 (386)
T 2ca6_A 184 QSHRLLHTVKMVQNGIRPE----------------GIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLR 247 (386)
T ss_dssp HHCTTCCEEECCSSCCCHH----------------HHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCC
T ss_pred HhCCCcCEEECcCCCCCHh----------------HHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcC
Confidence 5667777777777766310 000123345667777888888888875 56777777788888
Q ss_pred EEEeecCCCCcc----cCccC--CCCCCCCEEeCcCCcCCc----cCChhh-hcCCCCcEEEcCCcccCC
Q 003926 299 YLNIADNKLTGK----LFDDL--SCNPELGFVDLSSNLLTG----QLPNCL-LAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 299 ~L~l~~N~l~g~----~~~~~--~~~~~L~~l~ls~N~l~g----~~p~~~-~~~~~~~~~~~~~N~l~~ 357 (786)
.|+|++|.+++. ++..+ +.+++|+.|+|++|.+++ .+|..+ ..++++..+++++|.+++
T Consensus 248 ~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~ 317 (386)
T 2ca6_A 248 ELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 317 (386)
T ss_dssp EEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred EEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCc
Confidence 888888887765 45555 337778888888888877 477766 446778888888887765
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.88 E-value=8.4e-22 Score=203.00 Aligned_cols=109 Identities=29% Similarity=0.268 Sum_probs=54.5
Q ss_pred CCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEcc
Q 003926 108 DLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLR 187 (786)
Q Consensus 108 ~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 187 (786)
+|+.|+|++|++.+..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|..+++|++|+|+
T Consensus 36 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 115 (251)
T 3m19_A 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLG 115 (251)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcC
Confidence 45555555555555555555555555555555555555444445555555555555555554444444444444444444
Q ss_pred CCcCcccCCccccCCCCCCEEEccCCcCC
Q 003926 188 NNMFNGTLPDSFSYLENLRVLALSNNHFY 216 (786)
Q Consensus 188 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 216 (786)
+|.+++..+..|.++++|+.|+|++|+++
T Consensus 116 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 144 (251)
T 3m19_A 116 GNQLKSLPSGVFDRLTKLKELRLNTNQLQ 144 (251)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CCcCCCcChhHhccCCcccEEECcCCcCC
Confidence 44444433333444444444444444444
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-21 Score=202.10 Aligned_cols=179 Identities=25% Similarity=0.213 Sum_probs=116.7
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEc
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 186 (786)
.+.++++++++.++.. |..+. ++|+.|+|++|.+++..+..|.++++|++|+|++|.+++..|..|..+++|++|+|
T Consensus 14 ~~~~~l~~~~~~l~~~-p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 14 EGKKEVDCQGKSLDSV-PSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGGTEEECTTCCCSSC-CSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCeEEecCCCCcccc-CCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 3456788888877643 44443 57788888888888777777777888888888888777777777777777777777
Q ss_pred cCCcCcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChh
Q 003926 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPA 265 (786)
Q Consensus 187 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~ 265 (786)
++|.+++..+..|..+++|++|+|++|.+++..+. |..+++|++|+|++|.++ +..+.
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~---------------------~~~~~ 149 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ---------------------SIPAG 149 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC---------------------CCCTT
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCC---------------------ccCHH
Confidence 77777766666677777777777777777655543 455555555555555442 22233
Q ss_pred hhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCc
Q 003926 266 EVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTG 309 (786)
Q Consensus 266 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g 309 (786)
.|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|.+++
T Consensus 150 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 150 AFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp TTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred HcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeC
Confidence 44555555566666665555555555555555555555555544
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.88 E-value=4.1e-22 Score=203.73 Aligned_cols=197 Identities=17% Similarity=0.203 Sum_probs=167.4
Q ss_pred CCCCEEeccCCCCCCCCCccccCCCCCcEEEccccc-CCCCCCcccCCCCCCCEEEccC-CcCcccCCccccCCCCCCEE
Q 003926 131 SSLEILNMSSNFLNGAIPQELSILTSLQTLILDENM-LAGRVPDWLGSLPILAVLSLRN-NMFNGTLPDSFSYLENLRVL 208 (786)
Q Consensus 131 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L 208 (786)
++|+.|+|++|++++..+..|.++++|++|+|++|. +++..+..|.++++|++|+|++ |.+++..+..|.++++|+.|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 389999999999998888899999999999999997 8877777899999999999998 99998888889999999999
Q ss_pred EccCCcCCcCCCCCCCCCcCC---EEEcccC-CCCCCCCccccchhhhhccCCccCCcChhhhcCccccc-eeeccCccc
Q 003926 209 ALSNNHFYGEVPDFSGLTYLQ---VLDLENN-ALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQ-RLDLSSNRF 283 (786)
Q Consensus 209 ~Ls~N~l~~~~p~~~~l~~L~---~L~L~~N-~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l 283 (786)
++++|.+++ +|.|..+++|+ +|++++| .+ ++..+..|.++++|+ .|+|++|++
T Consensus 111 ~l~~n~l~~-lp~~~~l~~L~~L~~L~l~~N~~l---------------------~~i~~~~~~~l~~L~~~L~l~~n~l 168 (239)
T 2xwt_C 111 GIFNTGLKM-FPDLTKVYSTDIFFILEITDNPYM---------------------TSIPVNAFQGLCNETLTLKLYNNGF 168 (239)
T ss_dssp EEEEECCCS-CCCCTTCCBCCSEEEEEEESCTTC---------------------CEECTTTTTTTBSSEEEEECCSCCC
T ss_pred eCCCCCCcc-ccccccccccccccEEECCCCcch---------------------hhcCcccccchhcceeEEEcCCCCC
Confidence 999999987 66688888887 8877777 55 344556688899999 999999999
Q ss_pred cCCCchhhCCCCCCcEEEeecCC-CCcccCccCCCC-CCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCc
Q 003926 284 VGPFPQALLSLPSITYLNIADNK-LTGKLFDDLSCN-PELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARN 353 (786)
Q Consensus 284 ~~~~p~~~~~l~~L~~L~l~~N~-l~g~~~~~~~~~-~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N 353 (786)
+ .+|......++|+.|++++|+ +++..+..+..+ ++|+.|++++|++++ +|.. ....+..+.+.++
T Consensus 169 ~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 169 T-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLEHLKELIARNT 236 (239)
T ss_dssp C-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCTTCSEEECTTC
T ss_pred c-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc-CChh--HhccCceeeccCc
Confidence 9 556554455899999999995 998778889999 999999999999995 4544 4556777777654
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.7e-22 Score=213.20 Aligned_cols=194 Identities=24% Similarity=0.338 Sum_probs=133.1
Q ss_pred CCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCE
Q 003926 104 VKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAV 183 (786)
Q Consensus 104 ~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 183 (786)
.++++|++|++++|.+... | .+..+++|+.|+|++|.+++..+ +..+++|++|+|++|.+++. | .+..+++|+.
T Consensus 38 ~~l~~L~~L~l~~~~i~~l-~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~ 111 (308)
T 1h6u_A 38 ADLDGITTLSAFGTGVTTI-E-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV-S-AIAGLQSIKT 111 (308)
T ss_dssp HHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC-G-GGTTCTTCCE
T ss_pred HHcCCcCEEEeeCCCccCc-h-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc-h-hhcCCCCCCE
Confidence 4567778888888877653 3 47778888888888888775444 77788888888888887653 3 5777788888
Q ss_pred EEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcC
Q 003926 184 LSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAI 263 (786)
Q Consensus 184 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~ 263 (786)
|+|++|.+++. | .+..+++|+.|+|++|.+++..+ +..+++|+.|+|++|.+++ +
T Consensus 112 L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~----------------------~ 166 (308)
T 1h6u_A 112 LDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP-LAGLTNLQYLSIGNAQVSD----------------------L 166 (308)
T ss_dssp EECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCC----------------------C
T ss_pred EECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc-ccCCCCccEEEccCCcCCC----------------------C
Confidence 88888887753 3 27777888888888887775443 7777777777777776642 2
Q ss_pred hhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCc
Q 003926 264 PAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTG 333 (786)
Q Consensus 264 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g 333 (786)
+. +..+++|+.|+|++|++++..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|.+++
T Consensus 167 ~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 167 TP-LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp GG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred hh-hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 22 5556666666666666665433 6666667777777776665543 5666666777777666653
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.87 E-value=7.6e-22 Score=197.15 Aligned_cols=162 Identities=25% Similarity=0.210 Sum_probs=138.3
Q ss_pred CCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEE
Q 003926 106 LPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLS 185 (786)
Q Consensus 106 l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 185 (786)
.++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+
T Consensus 27 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 106 (208)
T 2o6s_A 27 PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELA 106 (208)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEE
Confidence 35899999999999988888899999999999999999988777889999999999999999987777899999999999
Q ss_pred ccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcCh
Q 003926 186 LRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIP 264 (786)
Q Consensus 186 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p 264 (786)
|++|.+++..+..|.++++|+.|+|++|.+++.++. |..+++|++|+|++|.+.+..| +|+.|+++.|+++|.+|
T Consensus 107 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~----~l~~L~~~~n~~~g~ip 182 (208)
T 2o6s_A 107 LNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP----GIRYLSEWINKHSGVVR 182 (208)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT----TTHHHHHHHHHCTTTBB
T ss_pred cCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCCC----CHHHHHHHHHhCCceee
Confidence 999999987777799999999999999999987775 7889999999999997764432 45566666666666666
Q ss_pred hhhcCcc
Q 003926 265 AEVSSYY 271 (786)
Q Consensus 265 ~~~~~l~ 271 (786)
.+++.++
T Consensus 183 ~~~~~l~ 189 (208)
T 2o6s_A 183 NSAGSVA 189 (208)
T ss_dssp CTTSSBC
T ss_pred ccCcccc
Confidence 5555443
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.87 E-value=7.6e-24 Score=230.74 Aligned_cols=245 Identities=22% Similarity=0.161 Sum_probs=124.2
Q ss_pred EEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCC----ccccCCC-CCcEEEcccccCCCCCCcccCCC-----CCC
Q 003926 112 LRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIP----QELSILT-SLQTLILDENMLAGRVPDWLGSL-----PIL 181 (786)
Q Consensus 112 L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~L 181 (786)
++|+.|+++|.+|..+...++|+.|||++|.+++..+ ..+..++ +|++|+|++|.+++..+..|..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4455555555555555555555555555555554444 4455555 55555555555555544444443 555
Q ss_pred CEEEccCCcCcccCCccc----cCC-CCCCEEEccCCcCCcCCCC-----CCC-CCcCCEEEcccCCCCCCCCcc-----
Q 003926 182 AVLSLRNNMFNGTLPDSF----SYL-ENLRVLALSNNHFYGEVPD-----FSG-LTYLQVLDLENNALGPQFPKV----- 245 (786)
Q Consensus 182 ~~L~Ls~N~l~~~~p~~~----~~l-~~L~~L~Ls~N~l~~~~p~-----~~~-l~~L~~L~L~~N~l~~~~p~~----- 245 (786)
++|+|++|.+++..+..+ ..+ ++|+.|+|++|.+++..+. +.. .++|++|+|++|.++...+..
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l 162 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQIL 162 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHH
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHH
Confidence 555555555554444322 222 5555555555555543331 222 245555666555554322211
Q ss_pred --c-cchhhhhccCCccCCcChhhhc----Cc-cccceeeccCccccCC----CchhhCC-CCCCcEEEeecCCCCcccC
Q 003926 246 --G-KKLVTMILSKNKFRSAIPAEVS----SY-YQLQRLDLSSNRFVGP----FPQALLS-LPSITYLNIADNKLTGKLF 312 (786)
Q Consensus 246 --~-~~L~~L~ls~N~l~~~~p~~~~----~l-~~L~~L~Ls~N~l~~~----~p~~~~~-l~~L~~L~l~~N~l~g~~~ 312 (786)
. .+|++|+|++|++++..+..+. .+ ++|+.|||++|+|.+. ++..+.. .++|+.|+|++|++++..+
T Consensus 163 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~ 242 (362)
T 3goz_A 163 AAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSL 242 (362)
T ss_dssp HTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCH
T ss_pred hcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHH
Confidence 1 2555566666666555544333 22 3666666666666542 3444444 2366666666666655433
Q ss_pred ----ccCCCCCCCCEEeCcCCcCCccCC-------hhhhcCCCCcEEEcCCcccC
Q 003926 313 ----DDLSCNPELGFVDLSSNLLTGQLP-------NCLLAGSKNRVVLYARNCLA 356 (786)
Q Consensus 313 ----~~~~~~~~L~~l~ls~N~l~g~~p-------~~~~~~~~~~~~~~~~N~l~ 356 (786)
..+..+++|+.|+|++|.+.+..+ ..+.....+..+++++|.+.
T Consensus 243 ~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~ 297 (362)
T 3goz_A 243 ENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIH 297 (362)
T ss_dssp HHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCC
T ss_pred HHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCC
Confidence 223455566666666666433222 12233344555566666553
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-22 Score=231.91 Aligned_cols=219 Identities=26% Similarity=0.372 Sum_probs=150.0
Q ss_pred CCCCCCCCCCCCCCCCCCccE-EeCCCCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccC
Q 003926 49 LSSWNITTEFCNTEPTSSLTV-VCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKI 127 (786)
Q Consensus 49 l~~W~~~~~~C~w~~~~~~~v-~c~~~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~ 127 (786)
+.+|..+.++|.-....|.++ .|...+++.|+++++.+++ +|. .+ +++|++|+|++|.|+ .+|
T Consensus 33 l~~W~~~~~~~~~~~~~~~~l~~C~~~~L~~L~Ls~n~L~~-lp~---------~l--~~~L~~L~Ls~N~l~-~ip--- 96 (571)
T 3cvr_A 33 WDKWEKQALPGENRNEAVSLLKECLINQFSELQLNRLNLSS-LPD---------NL--PPQITVLEITQNALI-SLP--- 96 (571)
T ss_dssp HHHHHTTCCTTCCHHHHHHHHHHHHHTTCSEEECCSSCCSC-CCS---------CC--CTTCSEEECCSSCCS-CCC---
T ss_pred HHHHhccCCccccccchhhhccccccCCccEEEeCCCCCCc-cCH---------hH--cCCCCEEECcCCCCc-ccc---
Confidence 456766677783211112357 6766688888888887765 443 22 267888888888887 455
Q ss_pred CCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCE
Q 003926 128 SRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRV 207 (786)
Q Consensus 128 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 207 (786)
..+++|+.|+|++|.|++ +|. +.+ +|+.|+|++|+|++ +|. .+++|+.|+|++|.|++ +|. .+++|+.
T Consensus 97 ~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~ 164 (571)
T 3cvr_A 97 ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEV 164 (571)
T ss_dssp CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCE
T ss_pred cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCE
Confidence 457888888888888887 666 655 88888888888886 665 67888888888888886 565 5678888
Q ss_pred EEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCC
Q 003926 208 LALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPF 287 (786)
Q Consensus 208 L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 287 (786)
|+|++|+|++ +|.|. ++|+.|+|++|.|+ .+|....+| +.....|+.|+|++|+|+ .+
T Consensus 165 L~Ls~N~L~~-lp~l~--~~L~~L~Ls~N~L~-~lp~~~~~L-----------------~~~~~~L~~L~Ls~N~l~-~l 222 (571)
T 3cvr_A 165 LSVRNNQLTF-LPELP--ESLEALDVSTNLLE-SLPAVPVRN-----------------HHSEETEIFFRCRENRIT-HI 222 (571)
T ss_dssp EECCSSCCSC-CCCCC--TTCCEEECCSSCCS-SCCCCC-------------------------CCEEEECCSSCCC-CC
T ss_pred EECCCCCCCC-cchhh--CCCCEEECcCCCCC-chhhHHHhh-----------------hcccccceEEecCCCcce-ec
Confidence 8888888887 44454 77888888888776 233221112 011223477788888777 46
Q ss_pred chhhCCCCCCcEEEeecCCCCcccCccCCC
Q 003926 288 PQALLSLPSITYLNIADNKLTGKLFDDLSC 317 (786)
Q Consensus 288 p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~ 317 (786)
|..+..+++|+.|+|++|+|++.+|..+..
T Consensus 223 p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~ 252 (571)
T 3cvr_A 223 PENILSLDPTCTIILEDNPLSSRIRESLSQ 252 (571)
T ss_dssp CGGGGGSCTTEEEECCSSSCCHHHHHHHHH
T ss_pred CHHHhcCCCCCEEEeeCCcCCCcCHHHHHH
Confidence 777777888888888888887777766544
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=99.87 E-value=1.6e-24 Score=244.16 Aligned_cols=278 Identities=21% Similarity=0.184 Sum_probs=181.2
Q ss_pred CEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCcc-----CCCCCCCCEEeccCCCCCCC---
Q 003926 75 SITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGK-----ISRLSSLEILNMSSNFLNGA--- 146 (786)
Q Consensus 75 ~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~-----~~~l~~L~~L~Ls~N~l~~~--- 146 (786)
+++.|++++|.+... ....++..+.++++|++|+|++|.+++..+.. +..+++|+.|+|++|.+++.
T Consensus 86 ~L~~L~L~~n~i~~~-----~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~ 160 (461)
T 1z7x_W 86 KIQKLSLQNCCLTGA-----GCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCE 160 (461)
T ss_dssp CCCEEECTTSCCBGG-----GHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHH
T ss_pred ceeEEEccCCCCCHH-----HHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHH
Confidence 466666666543310 00123445667777777777777776543322 22356677777777777753
Q ss_pred -CCccccCCCCCcEEEcccccCCCCCCcccC-----CCCCCCEEEccCCcCccc----CCccccCCCCCCEEEccCCcCC
Q 003926 147 -IPQELSILTSLQTLILDENMLAGRVPDWLG-----SLPILAVLSLRNNMFNGT----LPDSFSYLENLRVLALSNNHFY 216 (786)
Q Consensus 147 -~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 216 (786)
++..+..+++|++|+|++|.++...+..+. .+++|+.|+|++|.+++. ++..+..+++|+.|+|++|.++
T Consensus 161 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~ 240 (461)
T 1z7x_W 161 PLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLG 240 (461)
T ss_dssp HHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCH
T ss_pred HHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCC
Confidence 355566677777777777777654333333 356777888887777653 4566667777888888888776
Q ss_pred cCC-----CC-CCCCCcCCEEEcccCCCCCC----CCcc---ccchhhhhccCCccCCcChhhhcC-----ccccceeec
Q 003926 217 GEV-----PD-FSGLTYLQVLDLENNALGPQ----FPKV---GKKLVTMILSKNKFRSAIPAEVSS-----YYQLQRLDL 278 (786)
Q Consensus 217 ~~~-----p~-~~~l~~L~~L~L~~N~l~~~----~p~~---~~~L~~L~ls~N~l~~~~p~~~~~-----l~~L~~L~L 278 (786)
+.. +. +..+++|++|+|++|.++.. ++.. .++|+.|++++|.+++..+..+.. .++|+.|+|
T Consensus 241 ~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L 320 (461)
T 1z7x_W 241 DVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWV 320 (461)
T ss_dssp HHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEEC
T ss_pred hHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEc
Confidence 431 11 33567788888888877653 2332 356778888888776544444332 257888888
Q ss_pred cCccccCC----CchhhCCCCCCcEEEeecCCCCcccCccCC-----CCCCCCEEeCcCCcCCc----cCChhhhcCCCC
Q 003926 279 SSNRFVGP----FPQALLSLPSITYLNIADNKLTGKLFDDLS-----CNPELGFVDLSSNLLTG----QLPNCLLAGSKN 345 (786)
Q Consensus 279 s~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~-----~~~~L~~l~ls~N~l~g----~~p~~~~~~~~~ 345 (786)
++|.+++. ++..+..+++|+.|++++|++++..+..+. ..++|+.|++++|.+++ .+|..+..++++
T Consensus 321 ~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L 400 (461)
T 1z7x_W 321 KSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSL 400 (461)
T ss_dssp TTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCC
T ss_pred CCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCc
Confidence 88887765 566677778888888888887765444332 25678888888888875 677777777788
Q ss_pred cEEEcCCcccCC
Q 003926 346 RVVLYARNCLAA 357 (786)
Q Consensus 346 ~~~~~~~N~l~~ 357 (786)
+.+++++|.+++
T Consensus 401 ~~L~l~~N~i~~ 412 (461)
T 1z7x_W 401 RELDLSNNCLGD 412 (461)
T ss_dssp CEEECCSSSCCH
T ss_pred cEEECCCCCCCH
Confidence 888888877653
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.87 E-value=3.7e-24 Score=230.70 Aligned_cols=225 Identities=20% Similarity=0.175 Sum_probs=155.3
Q ss_pred cEEeCCCCEEEEEeCCCCCCCCCCCCCcCCccccccCCC--CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCC
Q 003926 68 TVVCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKL--PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNG 145 (786)
Q Consensus 68 ~v~c~~~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l--~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~ 145 (786)
++.|+...++.++++++.+. +..+..+ ++|+.|++++|.+.+..+. +..+++|+.|+|++|.+++
T Consensus 41 ~~~~~~~~~~~l~l~~~~~~------------~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~ 107 (336)
T 2ast_B 41 RLASDESLWQTLDLTGKNLH------------PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEV 107 (336)
T ss_dssp HHHTCSTTSSEEECTTCBCC------------HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECH
T ss_pred HHhcCchhheeeccccccCC------------HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCH
Confidence 35555445778888876543 2234455 7899999999999888776 5679999999999999887
Q ss_pred C-CCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCC-cCccc-CCccccCCCCCCEEEccCC-cCCcC-CC
Q 003926 146 A-IPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNN-MFNGT-LPDSFSYLENLRVLALSNN-HFYGE-VP 220 (786)
Q Consensus 146 ~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~~L~Ls~N-~l~~~-~p 220 (786)
. +|..+..+++|++|+|++|.+++..|..++.+++|++|+|++| .+++. ++..+.++++|+.|++++| .+++. ++
T Consensus 108 ~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~ 187 (336)
T 2ast_B 108 STLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQ 187 (336)
T ss_dssp HHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHH
T ss_pred HHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHH
Confidence 6 7888899999999999999998888888999999999999999 67763 6777888999999999999 88763 33
Q ss_pred C-CCCCC-cCCEEEcccCC--CC-CCCCcc---ccchhhhhccCCc-cCCcChhhhcCccccceeeccCcc-ccCCCchh
Q 003926 221 D-FSGLT-YLQVLDLENNA--LG-PQFPKV---GKKLVTMILSKNK-FRSAIPAEVSSYYQLQRLDLSSNR-FVGPFPQA 290 (786)
Q Consensus 221 ~-~~~l~-~L~~L~L~~N~--l~-~~~p~~---~~~L~~L~ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~ 290 (786)
. +..++ +|++|+|++|. ++ +.++.. .++|+.|++++|. +++..+..+..+++|+.|+|++|. +.......
T Consensus 188 ~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~ 267 (336)
T 2ast_B 188 VAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLE 267 (336)
T ss_dssp HHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGG
T ss_pred HHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHH
Confidence 3 67788 89999998883 43 112211 2344555555554 444444444455555555555553 11111113
Q ss_pred hCCCCCCcEEEeecC
Q 003926 291 LLSLPSITYLNIADN 305 (786)
Q Consensus 291 ~~~l~~L~~L~l~~N 305 (786)
+.++++|+.|++++|
T Consensus 268 l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 268 LGEIPTLKTLQVFGI 282 (336)
T ss_dssp GGGCTTCCEEECTTS
T ss_pred HhcCCCCCEEeccCc
Confidence 444555555555544
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.2e-23 Score=227.11 Aligned_cols=252 Identities=18% Similarity=0.145 Sum_probs=198.0
Q ss_pred EEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCC----ccCCCCC-CCCEEeccCCCCCCCCCccccC
Q 003926 79 LHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLS----GKISRLS-SLEILNMSSNFLNGAIPQELSI 153 (786)
Q Consensus 79 l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~----~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~ 153 (786)
.+++.+.+++.+| ..+...++|++|+|++|.+++..+ ..|.+++ +|+.|+|++|.+++..+..+..
T Consensus 3 ~~ls~n~~~~~~~---------~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 73 (362)
T 3goz_A 3 YKLTLHPGSNPVE---------EFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQ 73 (362)
T ss_dssp EECCCCTTCCHHH---------HHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred cccccccchHHHH---------HHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHH
Confidence 3455555554433 344455669999999999998877 7888898 9999999999999888888877
Q ss_pred C-----CCCcEEEcccccCCCCCCccc----CCC-CCCCEEEccCCcCcccCCcccc----C-CCCCCEEEccCCcCCcC
Q 003926 154 L-----TSLQTLILDENMLAGRVPDWL----GSL-PILAVLSLRNNMFNGTLPDSFS----Y-LENLRVLALSNNHFYGE 218 (786)
Q Consensus 154 l-----~~L~~L~L~~N~l~~~~p~~~----~~l-~~L~~L~Ls~N~l~~~~p~~~~----~-l~~L~~L~Ls~N~l~~~ 218 (786)
+ ++|++|+|++|.+++..+..+ ..+ ++|+.|+|++|.+++..+..+. . .++|++|+|++|.+++.
T Consensus 74 ~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~ 153 (362)
T 3goz_A 74 ILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIK 153 (362)
T ss_dssp HHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGS
T ss_pred HHhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHH
Confidence 5 999999999999998777654 444 8999999999999877665543 3 36999999999999854
Q ss_pred CCC-----CCCCC-cCCEEEcccCCCCCCCCcc-------c-cchhhhhccCCccCCc----ChhhhcC-ccccceeecc
Q 003926 219 VPD-----FSGLT-YLQVLDLENNALGPQFPKV-------G-KKLVTMILSKNKFRSA----IPAEVSS-YYQLQRLDLS 279 (786)
Q Consensus 219 ~p~-----~~~l~-~L~~L~L~~N~l~~~~p~~-------~-~~L~~L~ls~N~l~~~----~p~~~~~-l~~L~~L~Ls 279 (786)
... +..+. +|++|+|++|.+++..+.. . ++|+.|+|++|.+++. ++..+.. .++|+.|||+
T Consensus 154 ~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls 233 (362)
T 3goz_A 154 SSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLC 233 (362)
T ss_dssp CHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECC
T ss_pred HHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECc
Confidence 332 34554 9999999999998766531 2 5899999999999874 4555555 4589999999
Q ss_pred CccccCCCc----hhhCCCCCCcEEEeecCCCCccc-------CccCCCCCCCCEEeCcCCcCCccCChhh
Q 003926 280 SNRFVGPFP----QALLSLPSITYLNIADNKLTGKL-------FDDLSCNPELGFVDLSSNLLTGQLPNCL 339 (786)
Q Consensus 280 ~N~l~~~~p----~~~~~l~~L~~L~l~~N~l~g~~-------~~~~~~~~~L~~l~ls~N~l~g~~p~~~ 339 (786)
+|.|++..+ ..+..+++|+.|+|++|.+++.. +..+..++.|+.||+++|.+.+..+..+
T Consensus 234 ~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~~~~ 304 (362)
T 3goz_A 234 LNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSIPI 304 (362)
T ss_dssp SSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGCHHH
T ss_pred CCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcchHHH
Confidence 999997655 34577899999999999965443 3467788899999999999987755443
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.4e-21 Score=223.11 Aligned_cols=187 Identities=25% Similarity=0.365 Sum_probs=127.6
Q ss_pred CCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEcc
Q 003926 108 DLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLR 187 (786)
Q Consensus 108 ~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 187 (786)
+|+.|+|++|++++ +|..+ +++|+.|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. +.+ +|+.|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 66777777777766 45444 256777777777766 445 345666666666666665 555 444 66666666
Q ss_pred CCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhh
Q 003926 188 NNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEV 267 (786)
Q Consensus 188 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~ 267 (786)
+|.|++ +|. .+++|+.|+|++|.|++ +|. .+++|++|+|++|.| ++ +|. |
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~--~l~~L~~L~Ls~N~L---------------------~~-lp~-l 178 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE--LPTSLEVLSVRNNQL---------------------TF-LPE-L 178 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC--CCTTCCEEECCSSCC---------------------SC-CCC-C
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC--cCCCcCEEECCCCCC---------------------CC-cch-h
Confidence 666665 444 45666666666666665 333 345555555555554 44 444 4
Q ss_pred cCccccceeeccCccccCCCchhhCCCCCC-------cEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhh
Q 003926 268 SSYYQLQRLDLSSNRFVGPFPQALLSLPSI-------TYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLL 340 (786)
Q Consensus 268 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L-------~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~ 340 (786)
. ++|+.|+|++|+|+ .+|. |.. +| +.|+|++|+|+. +|..+..+++|+.|+|++|++++.+|..+.
T Consensus 179 ~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~ 251 (571)
T 3cvr_A 179 P--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRITH-IPENILSLDPTCTIILEDNPLSSRIRESLS 251 (571)
T ss_dssp C--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCCC-CCGGGGGSCTTEEEECCSSSCCHHHHHHHH
T ss_pred h--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCccee-cCHHHhcCCCCCEEEeeCCcCCCcCHHHHH
Confidence 4 78899999999988 5666 554 67 999999999994 788788899999999999999999999876
Q ss_pred cC
Q 003926 341 AG 342 (786)
Q Consensus 341 ~~ 342 (786)
..
T Consensus 252 ~l 253 (571)
T 3cvr_A 252 QQ 253 (571)
T ss_dssp HH
T ss_pred Hh
Confidence 53
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.86 E-value=1.2e-23 Score=231.38 Aligned_cols=216 Identities=19% Similarity=0.205 Sum_probs=169.8
Q ss_pred CCCccCCCCCCCCEEeccCCCCCCCCC----ccccCCCCCcEEEcccc---cCCCCCCccc-------CCCCCCCEEEcc
Q 003926 122 PLSGKISRLSSLEILNMSSNFLNGAIP----QELSILTSLQTLILDEN---MLAGRVPDWL-------GSLPILAVLSLR 187 (786)
Q Consensus 122 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~L~~N---~l~~~~p~~~-------~~l~~L~~L~Ls 187 (786)
.++..+..+++|+.|+|++|.+++..+ ..+..+++|++|+|++| ++++.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 356677788999999999999987643 44778999999999985 5556667655 688889999999
Q ss_pred CCcCcc----cCCccccCCCCCCEEEccCCcCCcCCCC-----CCCC---------CcCCEEEcccCCCCCCCCccccch
Q 003926 188 NNMFNG----TLPDSFSYLENLRVLALSNNHFYGEVPD-----FSGL---------TYLQVLDLENNALGPQFPKVGKKL 249 (786)
Q Consensus 188 ~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-----~~~l---------~~L~~L~L~~N~l~~~~p~~~~~L 249 (786)
+|.+++ .+|..+.++++|+.|+|++|.+++..+. +..+ ++|++|+|++|.++.
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~--------- 173 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLEN--------- 173 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTG---------
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCc---------
Confidence 998887 4677788888899999998888643221 2223 677777776666531
Q ss_pred hhhhccCCccCCcCh---hhhcCccccceeeccCcccc--C---CCchhhCCCCCCcEEEeecCCCC----cccCccCCC
Q 003926 250 VTMILSKNKFRSAIP---AEVSSYYQLQRLDLSSNRFV--G---PFPQALLSLPSITYLNIADNKLT----GKLFDDLSC 317 (786)
Q Consensus 250 ~~L~ls~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~--~---~~p~~~~~l~~L~~L~l~~N~l~----g~~~~~~~~ 317 (786)
+.+| ..+..+++|+.|+|++|+|. | .+|..+..+++|+.|+|++|.++ +.+|..+..
T Consensus 174 -----------~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~ 242 (386)
T 2ca6_A 174 -----------GSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKS 242 (386)
T ss_dssp -----------GGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGG
T ss_pred -----------HHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHcc
Confidence 2333 45677889999999999998 3 45558899999999999999997 678888899
Q ss_pred CCCCCEEeCcCCcCCcc----CChhhhc--CCCCcEEEcCCcccCC
Q 003926 318 NPELGFVDLSSNLLTGQ----LPNCLLA--GSKNRVVLYARNCLAA 357 (786)
Q Consensus 318 ~~~L~~l~ls~N~l~g~----~p~~~~~--~~~~~~~~~~~N~l~~ 357 (786)
+++|+.|+|++|.+++. +|..+.. .++++.+++++|.+++
T Consensus 243 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~ 288 (386)
T 2ca6_A 243 WPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIEL 288 (386)
T ss_dssp CTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBH
T ss_pred CCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCH
Confidence 99999999999999976 6777644 7889999999998875
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.5e-22 Score=211.90 Aligned_cols=142 Identities=11% Similarity=0.108 Sum_probs=113.8
Q ss_pred HHHHHHHhcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCC------------------ChHHHHHHHHHHhcC
Q 003926 469 LEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCH------------------STRNFMHHIELISKL 530 (786)
Q Consensus 469 ~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~------------------~~~~f~~E~~~l~~l 530 (786)
+..+......|+..+.||+|+||.||+|+..+|+.||||.++..... ....|.+|+++++++
T Consensus 82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l 161 (282)
T 1zar_A 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL 161 (282)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence 34455555667778999999999999999977999999999743211 235689999999999
Q ss_pred CCCCcceeeeeeeeccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCcccc
Q 003926 531 RHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSN 610 (786)
Q Consensus 531 ~H~NIv~l~g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHr 610 (786)
+ | +++.+++.. +..++||||+++|+|.+ +.. .....++.|+++||.|||+. +|+||
T Consensus 162 ~--~-~~v~~~~~~--------~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~~---giiHr 217 (282)
T 1zar_A 162 Q--G-LAVPKVYAW--------EGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYHR---GIVHG 217 (282)
T ss_dssp T--T-SSSCCEEEE--------ETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHHT---TEECS
T ss_pred c--C-CCcCeEEec--------cceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHHC---CCEeC
Confidence 9 5 666665432 34699999999999998 432 12346899999999999997 99999
Q ss_pred CCCCCceeecCCCcccccCCCcccc
Q 003926 611 NLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 611 dlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
||||+|||++ ++.+||+|||+++.
T Consensus 218 Dlkp~NILl~-~~~vkl~DFG~a~~ 241 (282)
T 1zar_A 218 DLSQYNVLVS-EEGIWIIDFPQSVE 241 (282)
T ss_dssp CCSTTSEEEE-TTEEEECCCTTCEE
T ss_pred CCCHHHEEEE-CCcEEEEECCCCeE
Confidence 9999999999 99999999999753
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.85 E-value=8.5e-21 Score=201.63 Aligned_cols=208 Identities=23% Similarity=0.301 Sum_probs=173.4
Q ss_pred EEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcC
Q 003926 112 LRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMF 191 (786)
Q Consensus 112 L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 191 (786)
+.+..+.+...++ +..+++|+.|++++|.++. +| .+..+++|+.|+|++|.+++..+ +..+++|++|+|++|.+
T Consensus 24 ~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l 97 (308)
T 1h6u_A 24 IAAGKSNVTDTVT--QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPL 97 (308)
T ss_dssp HHTTCSSTTSEEC--HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCC
T ss_pred HHhCCCCcCceec--HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcC
Confidence 3455556555433 4568899999999999985 45 68899999999999999986544 99999999999999999
Q ss_pred cccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhhcCcc
Q 003926 192 NGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYY 271 (786)
Q Consensus 192 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~ 271 (786)
++. +.+..+++|+.|+|++|.+++. +.+..+++|+.|++++|.+++ ++. +..++
T Consensus 98 ~~~--~~~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~~----------------------~~~-l~~l~ 151 (308)
T 1h6u_A 98 KNV--SAIAGLQSIKTLDLTSTQITDV-TPLAGLSNLQVLYLDLNQITN----------------------ISP-LAGLT 151 (308)
T ss_dssp SCC--GGGTTCTTCCEEECTTSCCCCC-GGGTTCTTCCEEECCSSCCCC----------------------CGG-GGGCT
T ss_pred CCc--hhhcCCCCCCEEECCCCCCCCc-hhhcCCCCCCEEECCCCccCc----------------------Ccc-ccCCC
Confidence 863 3688999999999999999874 558888999999988887642 222 77889
Q ss_pred ccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcC
Q 003926 272 QLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYA 351 (786)
Q Consensus 272 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~ 351 (786)
+|+.|+|++|++++..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|++++..| +..+.+++.++++
T Consensus 152 ~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~ 225 (308)
T 1h6u_A 152 NLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLT 225 (308)
T ss_dssp TCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEE
T ss_pred CccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEcc
Confidence 99999999999997544 9999999999999999997655 7889999999999999997654 7788899999999
Q ss_pred CcccCC
Q 003926 352 RNCLAA 357 (786)
Q Consensus 352 ~N~l~~ 357 (786)
+|.+++
T Consensus 226 ~N~i~~ 231 (308)
T 1h6u_A 226 NQTITN 231 (308)
T ss_dssp EEEEEC
T ss_pred CCeeec
Confidence 999876
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=99.85 E-value=7.4e-24 Score=238.74 Aligned_cols=275 Identities=23% Similarity=0.203 Sum_probs=173.4
Q ss_pred CEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCcc----CCCccCCCCCCCCEEeccCCCCCCCCCcc
Q 003926 75 SITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWG----PLSGKISRLSSLEILNMSSNFLNGAIPQE 150 (786)
Q Consensus 75 ~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g----~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 150 (786)
+++.|+++++.++.. .+...+..+++|++|+|++|.++. .++..+..+++|++|+|++|.++...+..
T Consensus 4 ~l~~L~Ls~~~l~~~--------~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~ 75 (461)
T 1z7x_W 4 DIQSLDIQCEELSDA--------RWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHC 75 (461)
T ss_dssp EEEEEEEESCCCCHH--------HHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHH
T ss_pred cceehhhhhcccCch--------hHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHH
Confidence 467788877654321 111224567777778888777764 34566677777888888877776543333
Q ss_pred c-cCCC----CCcEEEcccccCCC----CCCcccCCCCCCCEEEccCCcCcccCCccc-----cCCCCCCEEEccCCcCC
Q 003926 151 L-SILT----SLQTLILDENMLAG----RVPDWLGSLPILAVLSLRNNMFNGTLPDSF-----SYLENLRVLALSNNHFY 216 (786)
Q Consensus 151 ~-~~l~----~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~ 216 (786)
+ ..++ +|++|+|++|+++. .+|..+..+++|++|+|++|.++...+..+ ...++|+.|+|++|.++
T Consensus 76 l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~ 155 (461)
T 1z7x_W 76 VLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLS 155 (461)
T ss_dssp HHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCB
T ss_pred HHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCC
Confidence 3 2344 57788888777763 456777777778888888777765433322 22456777777777776
Q ss_pred cCC----C-CCCCCCcCCEEEcccCCCCCCCCcc--------ccchhhhhccCCccCCc----ChhhhcCccccceeecc
Q 003926 217 GEV----P-DFSGLTYLQVLDLENNALGPQFPKV--------GKKLVTMILSKNKFRSA----IPAEVSSYYQLQRLDLS 279 (786)
Q Consensus 217 ~~~----p-~~~~l~~L~~L~L~~N~l~~~~p~~--------~~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~L~Ls 279 (786)
+.. + .+..+++|++|+|++|.++...+.. .++|+.|++++|.+++. ++..+..+++|+.|+|+
T Consensus 156 ~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls 235 (461)
T 1z7x_W 156 AASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALG 235 (461)
T ss_dssp GGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECC
T ss_pred HHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEecc
Confidence 532 2 2455677777777777765432211 23677777777777663 46666677777777777
Q ss_pred CccccCCC-----chhhCCCCCCcEEEeecCCCCcc----cCccCCCCCCCCEEeCcCCcCCccCChhhhc-----CCCC
Q 003926 280 SNRFVGPF-----PQALLSLPSITYLNIADNKLTGK----LFDDLSCNPELGFVDLSSNLLTGQLPNCLLA-----GSKN 345 (786)
Q Consensus 280 ~N~l~~~~-----p~~~~~l~~L~~L~l~~N~l~g~----~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~-----~~~~ 345 (786)
+|.+.+.. +..+..+++|+.|++++|++++. ++..+..+++|+.|++++|.+++..+..+.. ..++
T Consensus 236 ~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L 315 (461)
T 1z7x_W 236 SNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQL 315 (461)
T ss_dssp SSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCC
T ss_pred CCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccc
Confidence 77776432 22333567777777777777764 4555566677777777777776543333322 1466
Q ss_pred cEEEcCCcccCC
Q 003926 346 RVVLYARNCLAA 357 (786)
Q Consensus 346 ~~~~~~~N~l~~ 357 (786)
+.+++++|.+++
T Consensus 316 ~~L~L~~n~l~~ 327 (461)
T 1z7x_W 316 ESLWVKSCSFTA 327 (461)
T ss_dssp CEEECTTSCCBG
T ss_pred eeeEcCCCCCch
Confidence 777777776653
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.85 E-value=7.9e-21 Score=205.81 Aligned_cols=219 Identities=21% Similarity=0.119 Sum_probs=156.1
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCC-ccccCCCCCcE-EEcccccCCCCCCcccCCCCCCCEE
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIP-QELSILTSLQT-LILDENMLAGRVPDWLGSLPILAVL 184 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~-L~L~~N~l~~~~p~~~~~l~~L~~L 184 (786)
++|++|+|++|+++...++.|.+|++|++|+|++|++.+.+| ..|.++++|.. +.++.|+++...|..|..+++|++|
T Consensus 30 ~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L 109 (350)
T 4ay9_X 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 109 (350)
T ss_dssp TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEE
T ss_pred CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccc
Confidence 578999999999998877889999999999999999977665 46788988775 6777899998888999999999999
Q ss_pred EccCCcCcccCCccccCCCCCCEEEccC-CcCCcCCC-CCCCCC-cCCEEEcccCCCCCCCCcc--ccchhhhhccC-Cc
Q 003926 185 SLRNNMFNGTLPDSFSYLENLRVLALSN-NHFYGEVP-DFSGLT-YLQVLDLENNALGPQFPKV--GKKLVTMILSK-NK 258 (786)
Q Consensus 185 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p-~~~~l~-~L~~L~L~~N~l~~~~p~~--~~~L~~L~ls~-N~ 258 (786)
++++|.+.+..+..+....++..|++.+ |++....+ .|..+. .++.|+|++|+|+...+.. ..+|+.+++++ |.
T Consensus 110 ~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f~~~~L~~l~l~~~n~ 189 (350)
T 4ay9_X 110 LISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNN 189 (350)
T ss_dssp EEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSSTTEEEEEEECTTCTT
T ss_pred cccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCCChhhccccchhHHhhccCCc
Confidence 9999999987777777778888999876 45654443 366654 5888899988887544433 24566777764 44
Q ss_pred cCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCC
Q 003926 259 FRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSN 329 (786)
Q Consensus 259 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N 329 (786)
++...+..|..+++|+.|||++|+|+...+..| .+|+.|.+.++.--..+| .+..+++|+.++++++
T Consensus 190 l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~---~~L~~L~~l~~~~l~~lP-~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 190 LEELPNDVFHGASGPVILDISRTRIHSLPSYGL---ENLKKLRARSTYNLKKLP-TLEKLVALMEASLTYP 256 (350)
T ss_dssp CCCCCTTTTTTEECCSEEECTTSCCCCCCSSSC---TTCCEEECTTCTTCCCCC-CTTTCCSCCEEECSCH
T ss_pred ccCCCHHHhccCcccchhhcCCCCcCccChhhh---ccchHhhhccCCCcCcCC-CchhCcChhhCcCCCC
Confidence 443333456777777777777777775433333 344444443333223444 3556666666666544
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.1e-20 Score=186.69 Aligned_cols=177 Identities=25% Similarity=0.237 Sum_probs=117.0
Q ss_pred EEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCc
Q 003926 111 VLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNM 190 (786)
Q Consensus 111 ~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 190 (786)
.++.++++++.. |..+ .++|++|+|++|.+++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|.
T Consensus 11 ~v~c~~~~l~~~-p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 87 (208)
T 2o6s_A 11 TVECYSQGRTSV-PTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQ 87 (208)
T ss_dssp EEECCSSCCSSC-CSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEecCCCccCC-CCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCc
Confidence 455555555443 3222 4578888888888887777777888888888888888886666677888888888888888
Q ss_pred CcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhhcC
Q 003926 191 FNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSS 269 (786)
Q Consensus 191 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~ 269 (786)
+++..+..|.++++|++|+|++|++++..+. |..+++|++|+|++|.+++ ..+..+..
T Consensus 88 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~---------------------~~~~~~~~ 146 (208)
T 2o6s_A 88 LQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKS---------------------VPDGVFDR 146 (208)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC---------------------CCTTTTTT
T ss_pred CCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccce---------------------eCHHHhcc
Confidence 8866666677788888888888877766554 5666777777766665542 22333455
Q ss_pred ccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCC
Q 003926 270 YYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCN 318 (786)
Q Consensus 270 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~ 318 (786)
+++|+.|+|++|.+.+ .+++|+.|+++.|+++|.+|..++.+
T Consensus 147 l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l 188 (208)
T 2o6s_A 147 LTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSV 188 (208)
T ss_dssp CTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSB
T ss_pred CCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccc
Confidence 5566666666665543 23455555555555555555555443
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.84 E-value=1.3e-22 Score=218.67 Aligned_cols=244 Identities=16% Similarity=0.136 Sum_probs=199.6
Q ss_pred CCCEEEccCCCCccCCCccCCCC--CCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCC-CCcccCCCCCCCEE
Q 003926 108 DLKVLRLVSLGLWGPLSGKISRL--SSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGR-VPDWLGSLPILAVL 184 (786)
Q Consensus 108 ~L~~L~L~~n~l~g~~~~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L 184 (786)
.++.|++++|.+. +..+..+ ++++.|++++|.+++..+. +..+++|++|+|++|.+++. +|..+..+++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 4789999999887 4567777 8999999999999988776 56899999999999999876 88899999999999
Q ss_pred EccCCcCcccCCccccCCCCCCEEEccCC-cCCcC-CCC-CCCCCcCCEEEcccC-CCCCC-CCc---ccc-chhhhhcc
Q 003926 185 SLRNNMFNGTLPDSFSYLENLRVLALSNN-HFYGE-VPD-FSGLTYLQVLDLENN-ALGPQ-FPK---VGK-KLVTMILS 255 (786)
Q Consensus 185 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~-~p~-~~~l~~L~~L~L~~N-~l~~~-~p~---~~~-~L~~L~ls 255 (786)
+|++|.+++..|..++.+++|+.|+|++| .+++. ++. +.++++|++|+|++| .+++. ++. ..+ +|+.|+++
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~ 203 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLS 203 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECC
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeC
Confidence 99999999888889999999999999999 67752 444 778999999999999 88753 333 246 89999999
Q ss_pred CC--ccC-CcChhhhcCccccceeeccCcc-ccCCCchhhCCCCCCcEEEeecCC-CCcccCccCCCCCCCCEEeCcCCc
Q 003926 256 KN--KFR-SAIPAEVSSYYQLQRLDLSSNR-FVGPFPQALLSLPSITYLNIADNK-LTGKLFDDLSCNPELGFVDLSSNL 330 (786)
Q Consensus 256 ~N--~l~-~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~l~~N~-l~g~~~~~~~~~~~L~~l~ls~N~ 330 (786)
+| .++ +.+|..+.++++|+.|+|++|. +++..+..+.++++|+.|++++|. ++......+..+++|+.|++++|
T Consensus 204 ~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~- 282 (336)
T 2ast_B 204 GYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI- 282 (336)
T ss_dssp SCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-
T ss_pred CCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-
Confidence 99 566 5678888899999999999999 787888899999999999999995 44333346788999999999999
Q ss_pred CCccCChhhhcCCCCcEEEcCCcccCCC
Q 003926 331 LTGQLPNCLLAGSKNRVVLYARNCLAAG 358 (786)
Q Consensus 331 l~g~~p~~~~~~~~~~~~~~~~N~l~~~ 358 (786)
++...-..+. ..+..+.+..|.+++.
T Consensus 283 i~~~~~~~l~--~~l~~L~l~~n~l~~~ 308 (336)
T 2ast_B 283 VPDGTLQLLK--EALPHLQINCSHFTTI 308 (336)
T ss_dssp SCTTCHHHHH--HHSTTSEESCCCSCCT
T ss_pred cCHHHHHHHH--hhCcceEEecccCccc
Confidence 4432111221 1234455788888873
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.82 E-value=2.8e-21 Score=228.65 Aligned_cols=266 Identities=18% Similarity=0.161 Sum_probs=131.6
Q ss_pred CCHHHHHHHHHHHhcCCCC--CCCCCCCCC-CCCCCCCCCCCccEEeCCCCEEEEEeCCCCCCCCCCCCCcCCccccccC
Q 003926 28 LQSSQAQTLLRIQGLLNNP--AVLSSWNIT-TEFCNTEPTSSLTVVCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLV 104 (786)
Q Consensus 28 ~~~~~~~~ll~~k~~~~~~--~~l~~W~~~-~~~C~w~~~~~~~v~c~~~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~ 104 (786)
..+.++++|+++...+... ..-..|... +..+.|. ++.+...+++.|.|.++.+... +. .+.
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~s~~~~~~l~L~~n~~~~~-~~---------~~l 193 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTAT-----NSAVSTPLTPKIELFANGKDEA-NQ---------ALL 193 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcccCCCcCCCCccccCC-----CceecCCccceEEeeCCCCCcc-hh---------hHh
Confidence 4566788999998765321 122346433 3455665 4777778899999987765432 11 111
Q ss_pred CCCC-----CCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCC
Q 003926 105 KLPD-----LKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLP 179 (786)
Q Consensus 105 ~l~~-----L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 179 (786)
...+ +..+++..|.+. .+++.|..+++|+.|+|++|.+. .+|..+.++++|++|+|++|.|+ .+|..|++|+
T Consensus 194 ~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~ 270 (727)
T 4b8c_D 194 QHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLS 270 (727)
T ss_dssp -----------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGT
T ss_pred hcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCC
Confidence 1111 223333344443 45788999999999999999998 67888889999999999999999 8899999999
Q ss_pred CCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCcccc----chhhhhcc
Q 003926 180 ILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGK----KLVTMILS 255 (786)
Q Consensus 180 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~----~L~~L~ls 255 (786)
+|++|+|++|.|+ .+|..|++|++|++|+|++|.|+..+..|+.+++|+.|+|++|.|++.+|.... .+..++|+
T Consensus 271 ~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~ 349 (727)
T 4b8c_D 271 NLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLR 349 (727)
T ss_dssp TCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCCCCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCCccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhc
Confidence 9999999999999 789999999999999999999985555699999999999999999887776542 22346677
Q ss_pred CCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCcc
Q 003926 256 KNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQ 334 (786)
Q Consensus 256 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ 334 (786)
+|.+++.+|.. |+.|++++|... -..+ +.|.+..+..+..+..+....+++|.+.+.
T Consensus 350 ~N~l~~~~p~~------l~~l~l~~n~~~---~~~~-------------~~l~~~~~~~~~~l~~~~~~~ls~Nil~~~ 406 (727)
T 4b8c_D 350 DNRPEIPLPHE------RRFIEINTDGEP---QREY-------------DSLQQSTEHLATDLAKRTFTVLSYNTLCQH 406 (727)
T ss_dssp HCCCCCCCCCC---------------------------------------------------------------CCCGG
T ss_pred cCcccCcCccc------cceeEeeccccc---cccc-------------CCccccccchhhcccccceeeeeccccccc
Confidence 77777776643 445556655110 0111 122333333344455556667777776643
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.4e-19 Score=183.53 Aligned_cols=166 Identities=23% Similarity=0.202 Sum_probs=142.7
Q ss_pred CCCCCCCCCCCCCCCCCccEEeCCCCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCC
Q 003926 50 SSWNITTEFCNTEPTSSLTVVCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISR 129 (786)
Q Consensus 50 ~~W~~~~~~C~w~~~~~~~v~c~~~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~ 129 (786)
..|..+...|+|. +|.|...+++ .+| ..+ .++|++|+|++|.+++..|..|.+
T Consensus 10 ~~~~~~~~~Cs~~-----~v~c~~~~l~-----------~ip---------~~~--~~~L~~L~Ls~n~i~~~~~~~~~~ 62 (229)
T 3e6j_A 10 SAACPSQCSCSGT-----TVDCRSKRHA-----------SVP---------AGI--PTNAQILYLHDNQITKLEPGVFDS 62 (229)
T ss_dssp -CCCCTTCEEETT-----EEECTTSCCS-----------SCC---------SCC--CTTCSEEECCSSCCCCCCTTTTTT
T ss_pred hccCCCCCEEeCC-----EeEccCCCcC-----------ccC---------CCC--CCCCCEEEcCCCccCccCHHHhhC
Confidence 4566678899998 5899654432 223 222 278999999999999999999999
Q ss_pred CCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEE
Q 003926 130 LSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLA 209 (786)
Q Consensus 130 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 209 (786)
+++|+.|+|++|+|++..+..|..+++|+.|+|++|++++..+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+
T Consensus 63 l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~ 141 (229)
T 3e6j_A 63 LINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLA 141 (229)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEE
T ss_pred ccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEE
Confidence 999999999999998777788899999999999999999888888999999999999999999 7899999999999999
Q ss_pred ccCCcCCcCCCC-CCCCCcCCEEEcccCCCCCCCC
Q 003926 210 LSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFP 243 (786)
Q Consensus 210 Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~p 243 (786)
|++|++++..+. |..+++|+.|+|++|.+....+
T Consensus 142 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 142 LDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 999999987765 8889999999999998865443
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.8e-19 Score=195.17 Aligned_cols=235 Identities=17% Similarity=0.098 Sum_probs=176.6
Q ss_pred EEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCC-cccCCCCCCCE-EEccC
Q 003926 111 VLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVP-DWLGSLPILAV-LSLRN 188 (786)
Q Consensus 111 ~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~-L~Ls~ 188 (786)
+++.++++++. +|..+ .++|+.|+|++|+|+...+..|.++++|++|+|++|++.+.+| ..|.++++|.. +.+++
T Consensus 13 ~v~C~~~~Lt~-iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 13 VFLCQESKVTE-IPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp EEEEESTTCCS-CCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred EEEecCCCCCc-cCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 45566667764 45444 3689999999999997777789999999999999999987776 57899999875 67778
Q ss_pred CcCcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCCCcCCEEEcccC-CCCCCCCcc----ccchhhhhccCCccCCc
Q 003926 189 NMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENN-ALGPQFPKV----GKKLVTMILSKNKFRSA 262 (786)
Q Consensus 189 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N-~l~~~~p~~----~~~L~~L~ls~N~l~~~ 262 (786)
|+++...|..|.++++|++|++++|.+++..+. +....++..|++.++ ++....+.. ...++.|+|++|+|+.
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~- 168 (350)
T 4ay9_X 90 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE- 168 (350)
T ss_dssp TTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE-
T ss_pred CcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC-
Confidence 999998899999999999999999999876653 566778889999764 554433322 2467889999999975
Q ss_pred ChhhhcCccccceeeccC-ccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhc
Q 003926 263 IPAEVSSYYQLQRLDLSS-NRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLA 341 (786)
Q Consensus 263 ~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~ 341 (786)
+|.......+|+.|++++ |.++...+..|..+++|+.|+|++|+|+...+..+ .+|+.|.+.++.--..+|. +..
T Consensus 169 i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~---~~L~~L~~l~~~~l~~lP~-l~~ 244 (350)
T 4ay9_X 169 IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGL---ENLKKLRARSTYNLKKLPT-LEK 244 (350)
T ss_dssp ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSC---TTCCEEECTTCTTCCCCCC-TTT
T ss_pred CChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhh---ccchHhhhccCCCcCcCCC-chh
Confidence 444444567899999985 56665444678999999999999999987655544 4555565555444446674 555
Q ss_pred CCCCcEEEcCCc
Q 003926 342 GSKNRVVLYARN 353 (786)
Q Consensus 342 ~~~~~~~~~~~N 353 (786)
..+++.+.+..+
T Consensus 245 l~~L~~l~l~~~ 256 (350)
T 4ay9_X 245 LVALMEASLTYP 256 (350)
T ss_dssp CCSCCEEECSCH
T ss_pred CcChhhCcCCCC
Confidence 667777776554
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.80 E-value=2.3e-19 Score=188.89 Aligned_cols=171 Identities=27% Similarity=0.334 Sum_probs=90.0
Q ss_pred CCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEE
Q 003926 105 KLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVL 184 (786)
Q Consensus 105 ~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 184 (786)
.+++|+.|++++|.+... + .+..+++|+.|+|++|++++..+ +.++++|++|+|++|.+++ +| .+..+++|++|
T Consensus 44 ~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L 117 (291)
T 1h6t_A 44 ELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSL 117 (291)
T ss_dssp HHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEE
T ss_pred hcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEE
Confidence 455555666665555443 2 25555556666666665554333 5555555555555555543 22 25555555555
Q ss_pred EccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcCh
Q 003926 185 SLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIP 264 (786)
Q Consensus 185 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p 264 (786)
+|++|.+++. +.+..+++|+.|++++|.+++. +.+..+++|+.|+|++|.++ +..|
T Consensus 118 ~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~---------------------~~~~ 173 (291)
T 1h6t_A 118 SLEHNGISDI--NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQIS---------------------DIVP 173 (291)
T ss_dssp ECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCC---------------------CCGG
T ss_pred ECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCccc---------------------cchh
Confidence 5555555542 2455555555555555555443 44444555555554444432 2222
Q ss_pred hhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCc
Q 003926 265 AEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTG 309 (786)
Q Consensus 265 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g 309 (786)
+..+++|+.|+|++|+|++ +| .+..+++|+.|++++|+++.
T Consensus 174 --l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 174 --LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp --GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred --hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccC
Confidence 4555566666666666654 23 25566666666666665554
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.5e-19 Score=208.64 Aligned_cols=172 Identities=28% Similarity=0.336 Sum_probs=96.9
Q ss_pred CCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEE
Q 003926 105 KLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVL 184 (786)
Q Consensus 105 ~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 184 (786)
.|++|+.|+|++|.+... + .|..|++|+.|+|++|.|++..| +..+++|+.|+|++|.+++ +| .+..+++|+.|
T Consensus 41 ~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L 114 (605)
T 1m9s_A 41 ELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSL 114 (605)
T ss_dssp HHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEE
T ss_pred cCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEE
Confidence 455555556655555443 2 35555566666666666554433 5555566666666665553 22 45555555555
Q ss_pred EccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcCh
Q 003926 185 SLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIP 264 (786)
Q Consensus 185 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p 264 (786)
+|++|.+.+. +.+..+++|+.|+|++|.+++. +.+..+++|+.|+|++|.+ ++..|
T Consensus 115 ~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l---------------------~~~~~ 170 (605)
T 1m9s_A 115 SLEHNGISDI--NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQI---------------------SDIVP 170 (605)
T ss_dssp ECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC-GGGGSCTTCSEEECCSSCC---------------------CCCGG
T ss_pred EecCCCCCCC--ccccCCCccCEEECCCCccCCc-hhhcccCCCCEEECcCCcC---------------------CCchh
Confidence 5555555542 2355555555555555555543 4455555555555555544 33333
Q ss_pred hhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcc
Q 003926 265 AEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGK 310 (786)
Q Consensus 265 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ 310 (786)
+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++++.
T Consensus 171 --l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 171 --LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp --GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred --hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCC
Confidence 55666677777777766653 2466667777777777766654
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.79 E-value=2.1e-19 Score=189.20 Aligned_cols=189 Identities=23% Similarity=0.285 Sum_probs=154.7
Q ss_pred CCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccC
Q 003926 109 LKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRN 188 (786)
Q Consensus 109 L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 188 (786)
+..+++..+.+.+..+ +..+++|+.|++++|.++.. + .+..+++|++|+|++|++++..| +..+++|+.|+|++
T Consensus 26 ~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~ 99 (291)
T 1h6t_A 26 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDE 99 (291)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred HHHHHhcCCCcccccc--hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCC
Confidence 3445566666665433 45788999999999999855 4 48889999999999999986544 89999999999999
Q ss_pred CcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhhc
Q 003926 189 NMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVS 268 (786)
Q Consensus 189 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~ 268 (786)
|.+++ +| .+..+++|+.|+|++|++++ ++.+..+++|+.|++++|.+++ + ..+.
T Consensus 100 n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~~~l~~l~~L~~L~l~~n~l~~----------------------~-~~l~ 153 (291)
T 1h6t_A 100 NKVKD-LS-SLKDLKKLKSLSLEHNGISD-INGLVHLPQLESLYLGNNKITD----------------------I-TVLS 153 (291)
T ss_dssp SCCCC-GG-GGTTCTTCCEEECTTSCCCC-CGGGGGCTTCCEEECCSSCCCC----------------------C-GGGG
T ss_pred CcCCC-Ch-hhccCCCCCEEECCCCcCCC-ChhhcCCCCCCEEEccCCcCCc----------------------c-hhhc
Confidence 99986 33 48899999999999999886 4678888888888888887642 2 3577
Q ss_pred CccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCc
Q 003926 269 SYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTG 333 (786)
Q Consensus 269 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g 333 (786)
.+++|+.|+|++|++++..| +..+++|+.|++++|++++. + .+..+++|+.|++++|+++.
T Consensus 154 ~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 154 RLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp GCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred cCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccC
Confidence 88999999999999997655 89999999999999999874 3 48889999999999999875
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.79 E-value=4.2e-19 Score=193.05 Aligned_cols=156 Identities=26% Similarity=0.235 Sum_probs=101.4
Q ss_pred cEEeCCCCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCC-CCCCCCEEeccCCCCCCC
Q 003926 68 TVVCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKIS-RLSSLEILNMSSNFLNGA 146 (786)
Q Consensus 68 ~v~c~~~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~-~l~~L~~L~Ls~N~l~~~ 146 (786)
.+.|.. ..++++++.+.. +|. .+. +.|+.|+|++|++++..+..|. ++++|+.|+|++|+|++.
T Consensus 15 ~C~C~~---~~l~c~~~~l~~-iP~---------~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i 79 (361)
T 2xot_A 15 NCLCAS---NILSCSKQQLPN-VPQ---------SLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFI 79 (361)
T ss_dssp TCEEET---TEEECCSSCCSS-CCS---------SCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEE
T ss_pred CCEECC---CEEEeCCCCcCc-cCc---------cCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCcc
Confidence 367753 246776665443 232 111 2467777777777777776676 777777777777777776
Q ss_pred CCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCC-C---
Q 003926 147 IPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-F--- 222 (786)
Q Consensus 147 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~--- 222 (786)
.|..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++|.+++..|..|.++++|+.|+|++|+|++..+. |
T Consensus 80 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~ 159 (361)
T 2xot_A 80 SSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDG 159 (361)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC--
T ss_pred ChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCc
Confidence 667777777777777777777766666677777777777777777766666777777777777777777654433 2
Q ss_pred CCCCcCCEEEcccCCC
Q 003926 223 SGLTYLQVLDLENNAL 238 (786)
Q Consensus 223 ~~l~~L~~L~L~~N~l 238 (786)
..+++|+.|+|++|+|
T Consensus 160 ~~l~~L~~L~L~~N~l 175 (361)
T 2xot_A 160 NKLPKLMLLDLSSNKL 175 (361)
T ss_dssp --CTTCCEEECCSSCC
T ss_pred ccCCcCCEEECCCCCC
Confidence 3455555555544444
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1.2e-19 Score=209.51 Aligned_cols=193 Identities=22% Similarity=0.286 Sum_probs=162.3
Q ss_pred CCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEE
Q 003926 106 LPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLS 185 (786)
Q Consensus 106 l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 185 (786)
+..+..++|..+.+...++ +..|++|+.|+|++|.+... | .+..|++|+.|+|++|++++..| +..+++|+.|+
T Consensus 20 l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 93 (605)
T 1m9s_A 20 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLF 93 (605)
T ss_dssp HHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEE
T ss_pred HHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEE
Confidence 3445556777777776554 56788999999999999854 4 58899999999999999987655 88999999999
Q ss_pred ccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChh
Q 003926 186 LRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPA 265 (786)
Q Consensus 186 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~ 265 (786)
|++|.+.+ +| .+..+++|+.|+|++|.+++ ++.+..+++|+.|+|++|.+++ . .
T Consensus 94 Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l~~l~~l~~L~~L~Ls~N~l~~---------------------l--~ 147 (605)
T 1m9s_A 94 LDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-INGLVHLPQLESLYLGNNKITD---------------------I--T 147 (605)
T ss_dssp CCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-CGGGGGCTTCSEEECCSSCCCC---------------------C--G
T ss_pred CcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-CccccCCCccCEEECCCCccCC---------------------c--h
Confidence 99999986 34 68899999999999999986 4678888899999888887742 2 4
Q ss_pred hhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCcc
Q 003926 266 EVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQ 334 (786)
Q Consensus 266 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ 334 (786)
.+..+++|+.|+|++|+|.+..| +..+++|+.|+|++|+|++. ..+..+++|+.|+|++|.+++.
T Consensus 148 ~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 148 VLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp GGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred hhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCC
Confidence 57789999999999999998777 99999999999999999985 4688999999999999999864
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1.8e-18 Score=174.19 Aligned_cols=133 Identities=26% Similarity=0.296 Sum_probs=125.4
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEc
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 186 (786)
++|+.|+|++|++.+..+..|..+++|+.|+|++|++++..|..|.++++|++|+|++|+++...+..|..+++|++|+|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 58999999999999998889999999999999999999999999999999999999999999777777899999999999
Q ss_pred cCCcCcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCCCcCCEEEcccCCCC
Q 003926 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALG 239 (786)
Q Consensus 187 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~ 239 (786)
++|.+++..|..|.++++|+.|+|++|++++..+. |..+++|+.|+|++|.+.
T Consensus 112 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 112 NANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 99999999999999999999999999999988875 888999999999999874
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.1e-18 Score=173.56 Aligned_cols=160 Identities=23% Similarity=0.262 Sum_probs=137.3
Q ss_pred cEEeCCCCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCC-ccCCCCCCCCEEeccCCCCCCC
Q 003926 68 TVVCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLS-GKISRLSSLEILNMSSNFLNGA 146 (786)
Q Consensus 68 ~v~c~~~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~-~~~~~l~~L~~L~Ls~N~l~~~ 146 (786)
+++|.. +.++++++.++. +|. .+ .+.+++|+|++|++++..+ ..|.++++|+.|+|++|.|++.
T Consensus 8 ~C~C~~---~~l~~s~n~l~~-iP~---------~~--~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i 72 (220)
T 2v70_A 8 KCRCEG---TTVDCSNQKLNK-IPE---------HI--PQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDI 72 (220)
T ss_dssp TCEEET---TEEECCSSCCSS-CCS---------CC--CTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEE
T ss_pred CCEECC---CEeEeCCCCccc-Ccc---------CC--CCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEE
Confidence 356643 257777776553 343 22 2346899999999999865 5689999999999999999998
Q ss_pred CCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCC
Q 003926 147 IPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGL 225 (786)
Q Consensus 147 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l 225 (786)
.+..|.++++|++|+|++|++++..|..|..+++|++|+|++|.+++..|..|.++++|+.|+|++|++++..|. |..+
T Consensus 73 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 152 (220)
T 2v70_A 73 EEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTL 152 (220)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTC
T ss_pred CHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCC
Confidence 888999999999999999999988888999999999999999999999999999999999999999999998774 8899
Q ss_pred CcCCEEEcccCCCCCCC
Q 003926 226 TYLQVLDLENNALGPQF 242 (786)
Q Consensus 226 ~~L~~L~L~~N~l~~~~ 242 (786)
++|+.|+|++|.+....
T Consensus 153 ~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 153 HSLSTLNLLANPFNCNC 169 (220)
T ss_dssp TTCCEEECCSCCEECSG
T ss_pred CCCCEEEecCcCCcCCC
Confidence 99999999999886543
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1.7e-18 Score=174.26 Aligned_cols=61 Identities=25% Similarity=0.353 Sum_probs=27.8
Q ss_pred CCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCC
Q 003926 156 SLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFY 216 (786)
Q Consensus 156 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 216 (786)
+|+.|+|++|++++..+..|..+++|+.|+|++|++++..|..|.++++|++|+|++|.++
T Consensus 33 ~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~ 93 (220)
T 2v9t_B 33 TITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 93 (220)
T ss_dssp TCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCC
T ss_pred CCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCC
Confidence 3444444444444333334444444444444444444444444444444444444444444
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.78 E-value=5.9e-19 Score=191.89 Aligned_cols=175 Identities=27% Similarity=0.258 Sum_probs=117.5
Q ss_pred CEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCcccc-CCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccC
Q 003926 110 KVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELS-ILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRN 188 (786)
Q Consensus 110 ~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 188 (786)
+.++++++++.. +|..+. ..++.|+|++|+|++..+..|. ++++|+.|+|++|+|++..|..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 577888887765 344443 3577788888888777777676 778888888888888776667777777888888888
Q ss_pred CcCcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhh
Q 003926 189 NMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEV 267 (786)
Q Consensus 189 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~ 267 (786)
|+|++..+..|.++++|+.|+|++|++++..|. |.++++|+.|+|++|.|+... +..|
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~---------------------~~~~ 156 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFP---------------------VELI 156 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCC---------------------GGGT
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeC---------------------HHHh
Confidence 877776666777777777777777777766553 667777777777666654211 1112
Q ss_pred ---cCccccceeeccCccccCCCchhhCCCCCC--cEEEeecCCCC
Q 003926 268 ---SSYYQLQRLDLSSNRFVGPFPQALLSLPSI--TYLNIADNKLT 308 (786)
Q Consensus 268 ---~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L--~~L~l~~N~l~ 308 (786)
..+++|+.|||++|+|++..+..+..++.+ +.|+|++|.+.
T Consensus 157 ~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 157 KDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp C----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred cCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 446667777777777766555556655542 55666665554
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.1e-18 Score=173.58 Aligned_cols=153 Identities=17% Similarity=0.154 Sum_probs=78.8
Q ss_pred CEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCC-ccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccC
Q 003926 110 KVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIP-QELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRN 188 (786)
Q Consensus 110 ~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 188 (786)
+.+++++|.++. +|..+. ..++.|+|++|+|++..| ..|..+++|+.|+|++|++++..|..|.++++|++|+|++
T Consensus 14 ~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 355666665544 333332 234555555555555433 2345555555555555555544444555555555555555
Q ss_pred CcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhhc
Q 003926 189 NMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVS 268 (786)
Q Consensus 189 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~ 268 (786)
|.+++..|..|.++++|++|+|++|++++.. |..|.
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~--------------------------------------------~~~~~ 126 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVG--------------------------------------------NDSFI 126 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBC--------------------------------------------TTSST
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeEC--------------------------------------------HhHcC
Confidence 5555444444555555555555555544433 33344
Q ss_pred CccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCc
Q 003926 269 SYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTG 309 (786)
Q Consensus 269 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g 309 (786)
.+++|+.|+|++|+|++..|..|..+++|+.|+|++|.+++
T Consensus 127 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 127 GLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp TCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEEC
T ss_pred CCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcC
Confidence 44555555555555555555555555555555555555554
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.77 E-value=3.9e-18 Score=172.87 Aligned_cols=85 Identities=26% Similarity=0.305 Sum_probs=35.8
Q ss_pred CCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEc
Q 003926 131 SSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLAL 210 (786)
Q Consensus 131 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 210 (786)
++|++|+|++|.|++..|..|.++++|+.|+|++|++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 44444444444444444444444444444444444443333333344444444444444444333333333333333333
Q ss_pred cCCcC
Q 003926 211 SNNHF 215 (786)
Q Consensus 211 s~N~l 215 (786)
++|++
T Consensus 120 s~N~l 124 (229)
T 3e6j_A 120 CCNKL 124 (229)
T ss_dssp CSSCC
T ss_pred cCCcc
Confidence 33333
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.1e-19 Score=215.13 Aligned_cols=215 Identities=19% Similarity=0.178 Sum_probs=111.1
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCC---------CCCccccCCCCCcEEEcccccCCCCCCcccCC
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNG---------AIPQELSILTSLQTLILDENMLAGRVPDWLGS 177 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~---------~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 177 (786)
+.++.|+|..|.+... +.. .|+.++|+.|.|.+ ..|..|..+++|+.|+|++|.+. .+|..+.+
T Consensus 173 ~~~~~l~L~~n~~~~~-~~~-----~l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~ 245 (727)
T 4b8c_D 173 PLTPKIELFANGKDEA-NQA-----LLQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFK 245 (727)
T ss_dssp -------------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGG
T ss_pred CccceEEeeCCCCCcc-hhh-----HhhcCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcC
Confidence 5677888888888764 322 23344444444332 45778888999999999999987 67777778
Q ss_pred CCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCC
Q 003926 178 LPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKN 257 (786)
Q Consensus 178 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N 257 (786)
+++|++|+|++|.|+ .+|..|++|++|++|+|++|.|+..+..|++|++|++|+|++|.|+
T Consensus 246 l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~------------------ 306 (727)
T 4b8c_D 246 YDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKYFYFFDNMVT------------------ 306 (727)
T ss_dssp CCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCSSCCSSGGGGTTCSEEECCSSCCC------------------
T ss_pred CCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCCccChhhcCCCCCCEEECCCCCCC------------------
Confidence 999999999999998 7888889999999999999999844445888888888888888763
Q ss_pred ccCCcChhhhcCccccceeeccCccccCCCchhhCCCCC-CcEEEeecCCCCcccCccCCCCCCCCEEeCcCC-------
Q 003926 258 KFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPS-ITYLNIADNKLTGKLFDDLSCNPELGFVDLSSN------- 329 (786)
Q Consensus 258 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N------- 329 (786)
.+|..|+++++|+.|+|++|.|++.+|..+..+.. +..|+|++|.++|.+|..+ ..|++++|
T Consensus 307 ----~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l------~~l~l~~n~~~~~~~ 376 (727)
T 4b8c_D 307 ----TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHER------RFIEINTDGEPQREY 376 (727)
T ss_dssp ----CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC----------------------
T ss_pred ----ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcccc------ceeEeeccccccccc
Confidence 45666777777888888888888777777655432 2236778888887777543 45556655
Q ss_pred -cCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 330 -LLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 330 -~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
.+.+.++..+..........++.|.+.+
T Consensus 377 ~~l~~~~~~~~~~l~~~~~~~ls~Nil~~ 405 (727)
T 4b8c_D 377 DSLQQSTEHLATDLAKRTFTVLSYNTLCQ 405 (727)
T ss_dssp -------------------------CCCG
T ss_pred CCccccccchhhcccccceeeeecccccc
Confidence 3333333334444455566677777653
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=1.6e-21 Score=223.77 Aligned_cols=176 Identities=21% Similarity=0.232 Sum_probs=101.1
Q ss_pred CCCCCCEEeccCCCCCCCCCccccCCCCCcEEEccccc-------------CCCCCCcccCCCCCCCEEE-ccCC-----
Q 003926 129 RLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENM-------------LAGRVPDWLGSLPILAVLS-LRNN----- 189 (786)
Q Consensus 129 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-------------l~~~~p~~~~~l~~L~~L~-Ls~N----- 189 (786)
.+++|+.|+|++|+++ .+|.++++|++|+.|++++|. +.+.+|..++.+++|+.|+ ++.|
T Consensus 347 ~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~L 425 (567)
T 1dce_A 347 TDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDL 425 (567)
T ss_dssp TTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHHH
T ss_pred cCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccchh
Confidence 3444555555555543 345555555555555544443 3444455555555555554 3333
Q ss_pred --------cCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCC
Q 003926 190 --------MFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRS 261 (786)
Q Consensus 190 --------~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~ 261 (786)
.++...+ ..|+.|+|++|.|++ +|.|+.+++|+.|+|++|.|+
T Consensus 426 ~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~~~~l~~L~~L~Ls~N~l~---------------------- 476 (567)
T 1dce_A 426 RSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCHLEQLLLVTHLDLSHNRLR---------------------- 476 (567)
T ss_dssp HHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCCGGGGTTCCEEECCSSCCC----------------------
T ss_pred hhhhhhcccccccCc------cCceEEEecCCCCCC-CcCccccccCcEeecCccccc----------------------
Confidence 3332111 135666666666665 344666666666666555543
Q ss_pred cChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCccc-CccCCCCCCCCEEeCcCCcCCccCC
Q 003926 262 AIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKL-FDDLSCNPELGFVDLSSNLLTGQLP 336 (786)
Q Consensus 262 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~-~~~~~~~~~L~~l~ls~N~l~g~~p 336 (786)
.+|..|+++++|+.|+|++|+|++ +| .++++++|+.|+|++|+|++.. |..+..+++|+.|+|++|++++.+|
T Consensus 477 ~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 477 ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 455666667777777777777765 45 6677777777777777777665 6667777777777777777766544
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.76 E-value=2e-18 Score=170.73 Aligned_cols=128 Identities=16% Similarity=0.217 Sum_probs=61.6
Q ss_pred CCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEE
Q 003926 105 KLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVL 184 (786)
Q Consensus 105 ~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 184 (786)
.+++|+.|++++|.+. .+| .+..+++|+.|++++|.++ .+..+..+++|++|+|++|.+++..|..|+.+++|++|
T Consensus 42 ~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L 117 (197)
T 4ezg_A 42 QMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLL 117 (197)
T ss_dssp HHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEE
T ss_pred hcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEE
Confidence 4455555555555554 223 3555555555555555443 12344555555555555555554444455555555555
Q ss_pred EccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccC
Q 003926 185 SLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENN 236 (786)
Q Consensus 185 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N 236 (786)
+|++|.+++..|..|+.+++|+.|+|++|.+.+.+|.+..+++|+.|++++|
T Consensus 118 ~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~~l~~l~~L~~L~l~~n 169 (197)
T 4ezg_A 118 DISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIMPLKTLPELKSLNIQFD 169 (197)
T ss_dssp ECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCGGGGGCSSCCEEECTTB
T ss_pred EecCCccCcHhHHHHhhCCCCCEEEccCCCCccccHhhcCCCCCCEEECCCC
Confidence 5555555544444455555555555555542222333334444444444333
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.75 E-value=8.8e-19 Score=181.50 Aligned_cols=171 Identities=23% Similarity=0.307 Sum_probs=104.1
Q ss_pred CCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEE
Q 003926 105 KLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVL 184 (786)
Q Consensus 105 ~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 184 (786)
++.++..++++.|.+.+.. .+..+++|+.|++++|.++. +| .+..+++|+.|+|++|++++..| +..+++|+.|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 3455566667777766543 45667777777777777763 34 56667777777777777765433 6677777777
Q ss_pred EccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcCh
Q 003926 185 SLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIP 264 (786)
Q Consensus 185 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p 264 (786)
+|++|++++ +|.. .. ++|+.|+|++|++++ ++.+..+++|+.|+|++|+++ + +|
T Consensus 91 ~L~~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~-~~~l~~l~~L~~L~Ls~N~i~---------------------~-~~ 144 (263)
T 1xeu_A 91 SVNRNRLKN-LNGI-PS-ACLSRLFLDNNELRD-TDSLIHLKNLEILSIRNNKLK---------------------S-IV 144 (263)
T ss_dssp ECCSSCCSC-CTTC-CC-SSCCEEECCSSCCSB-SGGGTTCTTCCEEECTTSCCC---------------------B-CG
T ss_pred ECCCCccCC-cCcc-cc-CcccEEEccCCccCC-ChhhcCcccccEEECCCCcCC---------------------C-Ch
Confidence 777777665 3322 22 666666666666665 344666666666666655553 1 12
Q ss_pred hhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcc
Q 003926 265 AEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGK 310 (786)
Q Consensus 265 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ 310 (786)
.+..+++|+.|+|++|++++. ..+..+++|+.|++++|++++.
T Consensus 145 -~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 145 -MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp -GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred -HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 345556666666666666654 4556666666666666666544
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=9.7e-19 Score=180.63 Aligned_cols=136 Identities=10% Similarity=0.091 Sum_probs=104.4
Q ss_pred CCccCccCCCCCceeEEEEe-cCCcE--EEEEEecccCCCC------------------------hHHHHHHHHHHhcCC
Q 003926 479 FDTSAFMGEGSQGQMYRGRL-KNGTF--VAIRCLKMKKCHS------------------------TRNFMHHIELISKLR 531 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~-~~g~~--vAvK~l~~~~~~~------------------------~~~f~~E~~~l~~l~ 531 (786)
|+..+.||+|+||.||+|.. .+|+. ||||+++...... ...+.+|++++++++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 55678999999999999997 68989 9999875432110 125889999999999
Q ss_pred CCCc--ceeeeeeeeccccCCCCceEEEEEecCCC-C----ChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhh-cCC
Q 003926 532 HRHL--VSALGHCFECYFDDSSVSRIFLIFEYVPN-G----TLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLH-TGI 603 (786)
Q Consensus 532 H~NI--v~l~g~~~~~~~~~~~~~~~~LV~Ey~~~-G----sL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH-~~~ 603 (786)
|+++ ...+++ +..+|||||+.+ | +|.++... .++.....++.|++.||.||| +.
T Consensus 129 ~~~i~~p~~~~~-----------~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~- 190 (258)
T 1zth_A 129 EAGVSVPQPYTY-----------MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQEA- 190 (258)
T ss_dssp HTTCCCCCEEEE-----------ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHTS-
T ss_pred hCCCCCCeEEEc-----------CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHHC-
Confidence 8865 222221 135899999942 4 66666432 223456788999999999999 76
Q ss_pred CCCccccCCCCCceeecCCCcccccCCCccccc
Q 003926 604 VPGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636 (786)
Q Consensus 604 ~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~ 636 (786)
+|+||||||+|||++. .++|+|||++...
T Consensus 191 --givHrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 191 --ELVHADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp --CEECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred --CEEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence 9999999999999998 8999999998543
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.7e-18 Score=179.33 Aligned_cols=171 Identities=18% Similarity=0.247 Sum_probs=138.4
Q ss_pred CCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEE
Q 003926 129 RLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVL 208 (786)
Q Consensus 129 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 208 (786)
++.++..++++.|.+++.. .+..+++|+.|++++|.++ .+| .+..+++|+.|+|++|.+++..| |.++++|+.|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 5667788888888888543 5778889999999999887 455 68888888888888888886444 8888888888
Q ss_pred EccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCc
Q 003926 209 ALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFP 288 (786)
Q Consensus 209 ~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 288 (786)
+|++|++++ +|.+.. ++|+.|+|++|+++ + ++ .+..+++|+.|+|++|+|++. |
T Consensus 91 ~L~~N~l~~-l~~~~~-~~L~~L~L~~N~l~---------------------~-~~-~l~~l~~L~~L~Ls~N~i~~~-~ 144 (263)
T 1xeu_A 91 SVNRNRLKN-LNGIPS-ACLSRLFLDNNELR---------------------D-TD-SLIHLKNLEILSIRNNKLKSI-V 144 (263)
T ss_dssp ECCSSCCSC-CTTCCC-SSCCEEECCSSCCS---------------------B-SG-GGTTCTTCCEEECTTSCCCBC-G
T ss_pred ECCCCccCC-cCcccc-CcccEEEccCCccC---------------------C-Ch-hhcCcccccEEECCCCcCCCC-h
Confidence 888888876 344444 77777777777663 3 23 478899999999999999975 4
Q ss_pred hhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCcc
Q 003926 289 QALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQ 334 (786)
Q Consensus 289 ~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ 334 (786)
.+..+++|+.|++++|++++. ..+..+++|+.|++++|.+++.
T Consensus 145 -~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 145 -MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp -GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred -HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 689999999999999999987 6788999999999999999865
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.74 E-value=7.4e-18 Score=166.56 Aligned_cols=152 Identities=13% Similarity=0.227 Sum_probs=103.7
Q ss_pred CCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCE
Q 003926 128 SRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRV 207 (786)
Q Consensus 128 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 207 (786)
..+++|+.|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|.+++..|..|+.+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 56778888888888887 455 5778888888888888654 3346777888888888888887767777777888888
Q ss_pred EEccCCcCCcCCC-CCCCCCcCCEEEcccCC-CCCCCCccccchhhhhccCCccCCcChhhhcCccccceeeccCccccC
Q 003926 208 LALSNNHFYGEVP-DFSGLTYLQVLDLENNA-LGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVG 285 (786)
Q Consensus 208 L~Ls~N~l~~~~p-~~~~l~~L~~L~L~~N~-l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 285 (786)
|+|++|.+++..| .+..+++|++|+|++|. + +.+| .+..+++|+.|+|++|++++
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i----------------------~~~~-~l~~l~~L~~L~l~~n~i~~ 173 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAI----------------------TDIM-PLKTLPELKSLNIQFDGVHD 173 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBC----------------------CCCG-GGGGCSSCCEEECTTBCCCC
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCc----------------------cccH-hhcCCCCCCEEECCCCCCcC
Confidence 8888877776444 36666777777766665 3 2233 35566667777777776664
Q ss_pred CCchhhCCCCCCcEEEeecCCCC
Q 003926 286 PFPQALLSLPSITYLNIADNKLT 308 (786)
Q Consensus 286 ~~p~~~~~l~~L~~L~l~~N~l~ 308 (786)
++ .+..+++|+.|++++|++.
T Consensus 174 -~~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 174 -YR-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp -CT-TGGGCSSCCEEEECBC---
T ss_pred -hH-HhccCCCCCEEEeeCcccC
Confidence 22 5666666666666666654
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.72 E-value=9.8e-18 Score=164.93 Aligned_cols=111 Identities=28% Similarity=0.293 Sum_probs=65.1
Q ss_pred CCCEEEccCCCCccCCCc-cCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEc
Q 003926 108 DLKVLRLVSLGLWGPLSG-KISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (786)
Q Consensus 108 ~L~~L~L~~n~l~g~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 186 (786)
+|++|+|++|.+++..+. .|.++++|++|+|++|+|++..|..|.++++|++|+|++|++++..|..|.++++|++|+|
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 109 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 556666666666555443 3556666666666666666555555666666666666666665555555555566666666
Q ss_pred cCCcCcccCCccccCCCCCCEEEccCCcCCcC
Q 003926 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYGE 218 (786)
Q Consensus 187 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 218 (786)
++|++++..|..|..+++|+.|+|++|.+++.
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred CCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 66666555555555555555555555555543
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.2e-19 Score=211.00 Aligned_cols=254 Identities=13% Similarity=0.098 Sum_probs=130.8
Q ss_pred cCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCC--------------------------CCCCCccccCCCC
Q 003926 103 LVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFL--------------------------NGAIPQELSILTS 156 (786)
Q Consensus 103 l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l--------------------------~~~~p~~~~~l~~ 156 (786)
+.++++|++|+|++|.+.+ +|..+.++++|+.|+++.+.. .+.+|..+..+++
T Consensus 216 ~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~l~~~~~~~~~ 294 (592)
T 3ogk_B 216 ARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQ 294 (592)
T ss_dssp HHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTTTGGGGGGGGGG
T ss_pred HhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchhHHHHHHhhcCC
Confidence 4455666666666665554 334444445555555443211 1223333334444
Q ss_pred CcEEEcccccCCCCCC-cccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccC-----------CcCCcC-CCC-C
Q 003926 157 LQTLILDENMLAGRVP-DWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSN-----------NHFYGE-VPD-F 222 (786)
Q Consensus 157 L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~-----------N~l~~~-~p~-~ 222 (786)
|++|+|++|.+++... ..+..+++|+.|+++++...+.++..+..+++|+.|+|++ |.+++. ++. +
T Consensus 295 L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~ 374 (592)
T 3ogk_B 295 IRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALA 374 (592)
T ss_dssp CCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHH
T ss_pred CcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHH
Confidence 4444444444332211 2234444444444442211122222233445555555552 333321 111 2
Q ss_pred CCCCcCCEEEcccCCCCCCCCcc----ccchhhhhcc----CCccCCc-----ChhhhcCccccceeeccCc--cccCCC
Q 003926 223 SGLTYLQVLDLENNALGPQFPKV----GKKLVTMILS----KNKFRSA-----IPAEVSSYYQLQRLDLSSN--RFVGPF 287 (786)
Q Consensus 223 ~~l~~L~~L~L~~N~l~~~~p~~----~~~L~~L~ls----~N~l~~~-----~p~~~~~l~~L~~L~Ls~N--~l~~~~ 287 (786)
..+++|++|+++.|.+++..+.. .++|+.|+++ .|.+++. ++..+.++++|+.|+|++| .+++..
T Consensus 375 ~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~ 454 (592)
T 3ogk_B 375 QGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLG 454 (592)
T ss_dssp HHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHH
T ss_pred hhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHH
Confidence 23556666666656555433221 3456666664 5666653 3444556677777777643 355544
Q ss_pred chhhC-CCCCCcEEEeecCCCCc-ccCccCCCCCCCCEEeCcCCcCCcc-CChhhhcCCCCcEEEcCCcccCC
Q 003926 288 PQALL-SLPSITYLNIADNKLTG-KLFDDLSCNPELGFVDLSSNLLTGQ-LPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 288 p~~~~-~l~~L~~L~l~~N~l~g-~~~~~~~~~~~L~~l~ls~N~l~g~-~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
+..+. .+++|+.|++++|++++ .++..+..+++|+.|++++|.+++. ++.....+++++.+++++|.++.
T Consensus 455 ~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~ 527 (592)
T 3ogk_B 455 LSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASM 527 (592)
T ss_dssp HHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCT
T ss_pred HHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCH
Confidence 44443 36777777777777776 3344456677788888888877654 34444556777778877777654
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.72 E-value=4e-17 Score=160.56 Aligned_cols=131 Identities=23% Similarity=0.255 Sum_probs=117.0
Q ss_pred CEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCc-cccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccC
Q 003926 110 KVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQ-ELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRN 188 (786)
Q Consensus 110 ~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 188 (786)
++|++++|++. .+|..+.. +|+.|+|++|+|++..+. .|..+++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 56788888884 45655543 899999999999988775 489999999999999999999999999999999999999
Q ss_pred CcCcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCCCcCCEEEcccCCCCCCCC
Q 003926 189 NMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFP 243 (786)
Q Consensus 189 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~p 243 (786)
|+|++..|..|.++++|++|+|++|++++.+|. |..+++|++|+|++|.+.+..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 999999998999999999999999999998775 8899999999999999987654
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.69 E-value=6.5e-17 Score=155.31 Aligned_cols=134 Identities=25% Similarity=0.220 Sum_probs=120.3
Q ss_pred CCCCCCEEEccCCCCc-cCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCE
Q 003926 105 KLPDLKVLRLVSLGLW-GPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAV 183 (786)
Q Consensus 105 ~l~~L~~L~L~~n~l~-g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 183 (786)
..++|+.|+|++|.+. +.+|..+..+++|+.|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 4578999999999998 78898899999999999999999876 78999999999999999999888998989999999
Q ss_pred EEccCCcCcccC-CccccCCCCCCEEEccCCcCCcCCC----CCCCCCcCCEEEcccCCCCC
Q 003926 184 LSLRNNMFNGTL-PDSFSYLENLRVLALSNNHFYGEVP----DFSGLTYLQVLDLENNALGP 240 (786)
Q Consensus 184 L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p----~~~~l~~L~~L~L~~N~l~~ 240 (786)
|+|++|.+++.. +..+..+++|+.|++++|.+++..+ .+..+++|++|++++|.+..
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 999999998642 2789999999999999999998877 58889999999999998753
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=6.6e-20 Score=210.32 Aligned_cols=188 Identities=19% Similarity=0.153 Sum_probs=154.4
Q ss_pred cCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCc-------------CcccCCccccCCCCCCEEE-ccCCcCCc
Q 003926 152 SILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNM-------------FNGTLPDSFSYLENLRVLA-LSNNHFYG 217 (786)
Q Consensus 152 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-------------l~~~~p~~~~~l~~L~~L~-Ls~N~l~~ 217 (786)
..+++|+.|+|++|+++ .+|..+++|++|+.|++++|. +.+.+|..++++++|+.|+ ++.|.+
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~-- 422 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL-- 422 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH--
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc--
Confidence 56788888888888886 778888888888888887775 5666777777777787777 666644
Q ss_pred CCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCC
Q 003926 218 EVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSI 297 (786)
Q Consensus 218 ~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 297 (786)
.+|+.+.+++|.++...+ ..|+.|+|++|.|++ +|. ++.+++|+.|+|++|+|+ .+|..|+++++|
T Consensus 423 --------~~L~~l~l~~n~i~~l~~---~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L 488 (567)
T 1dce_A 423 --------DDLRSKFLLENSVLKMEY---ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCL 488 (567)
T ss_dssp --------HHHHHHHHHHHHHHHHHH---TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTC
T ss_pred --------chhhhhhhhcccccccCc---cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCC
Confidence 234445555555432211 247778888888877 676 999999999999999999 789999999999
Q ss_pred cEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccC-ChhhhcCCCCcEEEcCCcccCCC
Q 003926 298 TYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQL-PNCLLAGSKNRVVLYARNCLAAG 358 (786)
Q Consensus 298 ~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~-p~~~~~~~~~~~~~~~~N~l~~~ 358 (786)
+.|+|++|+|++ +| .++.+++|+.|+|++|+|++.+ |..+..++++..+++++|.+++.
T Consensus 489 ~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~ 548 (567)
T 1dce_A 489 EVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQE 548 (567)
T ss_dssp CEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGS
T ss_pred CEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCC
Confidence 999999999998 56 8999999999999999999987 99999999999999999999873
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.66 E-value=6.5e-17 Score=151.99 Aligned_cols=129 Identities=27% Similarity=0.257 Sum_probs=115.8
Q ss_pred CCCCCCEEEccCCCCc-cCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCE
Q 003926 105 KLPDLKVLRLVSLGLW-GPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAV 183 (786)
Q Consensus 105 ~l~~L~~L~L~~n~l~-g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 183 (786)
..++|+.|++++|.++ +.+|..+..+++|+.|+|++|.+++. ..+..+++|++|+|++|.+++.+|..+..+++|++
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 4578999999999998 88899999999999999999999976 77899999999999999999888998989999999
Q ss_pred EEccCCcCccc-CCccccCCCCCCEEEccCCcCCcCCC----CCCCCCcCCEEEccc
Q 003926 184 LSLRNNMFNGT-LPDSFSYLENLRVLALSNNHFYGEVP----DFSGLTYLQVLDLEN 235 (786)
Q Consensus 184 L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p----~~~~l~~L~~L~L~~ 235 (786)
|++++|.+++. .+..++.+++|+.|++++|.+++..+ .+..+++|+.|++++
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 99999999874 44789999999999999999998776 488899999998864
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=99.65 E-value=6.2e-18 Score=196.53 Aligned_cols=248 Identities=12% Similarity=0.012 Sum_probs=172.7
Q ss_pred CCCEEEccCCC-Ccc-CCCccCCCCCCCCEEeccCCCCCCC----CCccccCCCCCcEEEcccccCCC----CCCcccCC
Q 003926 108 DLKVLRLVSLG-LWG-PLSGKISRLSSLEILNMSSNFLNGA----IPQELSILTSLQTLILDENMLAG----RVPDWLGS 177 (786)
Q Consensus 108 ~L~~L~L~~n~-l~g-~~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~----~~p~~~~~ 177 (786)
+|++|+|++|. +.. .++....++++|+.|+|++|.+++. ++..+..+++|+.|+|++|.+++ .++..+.+
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 48899998876 211 1233334788899999999988765 44455678889999999998873 34555678
Q ss_pred CCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCc----CCCCCCCCCcCCEEEcccCCCCCCCCcc---ccchh
Q 003926 178 LPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYG----EVPDFSGLTYLQVLDLENNALGPQFPKV---GKKLV 250 (786)
Q Consensus 178 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~l~~L~~L~L~~N~l~~~~p~~---~~~L~ 250 (786)
+++|+.|+|++|.+.+ +|..+.++++|+.|+++.+.... ....+..+++|+.|+++++.. ..+|.. .++|+
T Consensus 219 ~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~~~~~~L~ 296 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGP-NEMPILFPFAAQIR 296 (592)
T ss_dssp CTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCT-TTGGGGGGGGGGCC
T ss_pred CCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccch-hHHHHHHhhcCCCc
Confidence 8899999999988876 66778888899999988643321 112367778888888887532 334433 46788
Q ss_pred hhhccCCccCCcCh-hhhcCccccceeeccCccccCCCchhhCCCCCCcEEEee-----------cCCCCcccCc-cCCC
Q 003926 251 TMILSKNKFRSAIP-AEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIA-----------DNKLTGKLFD-DLSC 317 (786)
Q Consensus 251 ~L~ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~-----------~N~l~g~~~~-~~~~ 317 (786)
+|++++|.+++... ..+..+++|+.|+|++|-..+.++..+..+++|+.|+++ .|.+++.... ....
T Consensus 297 ~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~ 376 (592)
T 3ogk_B 297 KLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQG 376 (592)
T ss_dssp EEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHH
T ss_pred EEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhh
Confidence 88888888765444 346788888888888443334455555678888888888 3666654222 2345
Q ss_pred CCCCCEEeCcCCcCCccCChhhhc-CCCCcEEEcC----CcccCC
Q 003926 318 NPELGFVDLSSNLLTGQLPNCLLA-GSKNRVVLYA----RNCLAA 357 (786)
Q Consensus 318 ~~~L~~l~ls~N~l~g~~p~~~~~-~~~~~~~~~~----~N~l~~ 357 (786)
+++|+.|+++.|.+++..+..+.. +++++.+.++ .|.+++
T Consensus 377 ~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~ 421 (592)
T 3ogk_B 377 CQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITD 421 (592)
T ss_dssp CTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSS
T ss_pred CccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccC
Confidence 788888888888888777766655 6778888885 555554
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.64 E-value=4e-16 Score=149.79 Aligned_cols=106 Identities=28% Similarity=0.217 Sum_probs=67.4
Q ss_pred CCCCCEEeccCCCCC-CCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEE
Q 003926 130 LSSLEILNMSSNFLN-GAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVL 208 (786)
Q Consensus 130 l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 208 (786)
.++|+.|+|++|.++ +.+|..+..+++|+.|+|++|.+++. ..+..+++|++|+|++|.+++.+|..+.++++|+.|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 366777777777776 66676677777777777777777654 566667777777777777766666666666666666
Q ss_pred EccCCcCCcCC--CCCCCCCcCCEEEcccCC
Q 003926 209 ALSNNHFYGEV--PDFSGLTYLQVLDLENNA 237 (786)
Q Consensus 209 ~Ls~N~l~~~~--p~~~~l~~L~~L~L~~N~ 237 (786)
+|++|.+++.. +.+..+++|++|++++|.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~ 131 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCE 131 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSG
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCc
Confidence 66666665432 234444444444444433
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.9e-15 Score=146.34 Aligned_cols=112 Identities=25% Similarity=0.242 Sum_probs=64.9
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEc
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 186 (786)
++|++|+|++|++.+..+..|.++++|+.|+|++|.+++..+..|..+++|+.|+|++|++++..+..|..+++|++|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 107 (177)
T 2o6r_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELAL 107 (177)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEEC
Confidence 45666666666666555555566666666666666666555555556666666666666665554455555555555555
Q ss_pred cCCcCcccCCccccCCCCCCEEEccCCcCCcC
Q 003926 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYGE 218 (786)
Q Consensus 187 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 218 (786)
++|.+++..+..|..+++|+.|+|++|.+++.
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 108 DTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred cCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 55555544444445555555555555555543
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.62 E-value=3.8e-15 Score=144.23 Aligned_cols=132 Identities=28% Similarity=0.261 Sum_probs=113.6
Q ss_pred CCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccC
Q 003926 109 LKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRN 188 (786)
Q Consensus 109 L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 188 (786)
.+.+++++|++... |..+ .++|+.|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++
T Consensus 9 ~~~l~~~~~~l~~~-p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLTSV-PTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCSSC-CTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCccC-CCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 35677777877654 4333 37899999999999988888889999999999999999987778899999999999999
Q ss_pred CcCcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCCCcCCEEEcccCCCCCCCC
Q 003926 189 NMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFP 243 (786)
Q Consensus 189 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~p 243 (786)
|.+++..+..|.++++|+.|+|++|.+++.++. |..+++|++|+|++|.+.+..|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 999988777889999999999999999977665 6789999999999998876554
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.61 E-value=4.6e-15 Score=145.81 Aligned_cols=106 Identities=25% Similarity=0.332 Sum_probs=58.3
Q ss_pred CCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEcc
Q 003926 132 SLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALS 211 (786)
Q Consensus 132 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 211 (786)
+|+.|+|++|+|+ .+|..|.++++|+.|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|+.|+|+
T Consensus 32 ~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 110 (193)
T 2wfh_A 32 DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLH 110 (193)
T ss_dssp TCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECC
Confidence 4555555555554 344555555555555555555555545555555555555555555555555555555555555555
Q ss_pred CCcCCcCCCC-CCCCCcCCEEEcccCCC
Q 003926 212 NNHFYGEVPD-FSGLTYLQVLDLENNAL 238 (786)
Q Consensus 212 ~N~l~~~~p~-~~~l~~L~~L~L~~N~l 238 (786)
+|.+++..+. |..+++|+.|+|++|.+
T Consensus 111 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~ 138 (193)
T 2wfh_A 111 GNDISVVPEGAFNDLSALSHLAIGANPL 138 (193)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECCSSCE
T ss_pred CCCCCeeChhhhhcCccccEEEeCCCCe
Confidence 5555544443 55555566666555554
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.60 E-value=1.1e-15 Score=143.64 Aligned_cols=126 Identities=21% Similarity=0.243 Sum_probs=58.4
Q ss_pred CCCEEEccCCcCc-ccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCc
Q 003926 180 ILAVLSLRNNMFN-GTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNK 258 (786)
Q Consensus 180 ~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~ 258 (786)
+|+.|++++|.++ +.+|..+..+++|+.|++++|.+++. +.+..+++|++|+|++|.++
T Consensus 18 ~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~------------------- 77 (149)
T 2je0_A 18 DVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVS------------------- 77 (149)
T ss_dssp GCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCC-------------------
T ss_pred cCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCccc-------------------
Confidence 3444444444444 44444444445555555555544443 33444445555544444432
Q ss_pred cCCcChhhhcCccccceeeccCccccCC-CchhhCCCCCCcEEEeecCCCCcccC---ccCCCCCCCCEEeCc
Q 003926 259 FRSAIPAEVSSYYQLQRLDLSSNRFVGP-FPQALLSLPSITYLNIADNKLTGKLF---DDLSCNPELGFVDLS 327 (786)
Q Consensus 259 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~g~~~---~~~~~~~~L~~l~ls 327 (786)
+.+|..+..+++|+.|+|++|++++. .|..+..+++|+.|++++|++++..+ ..+..+++|+.||++
T Consensus 78 --~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 78 --GGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp --SCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred --chHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 22333344444455555555554432 22444455555555555555544433 234444555555443
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.60 E-value=6.3e-15 Score=144.82 Aligned_cols=110 Identities=28% Similarity=0.306 Sum_probs=103.6
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEc
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 186 (786)
++|++|+|++|.++ .+|..|.++++|+.|+|++|.|++..+..|.++++|++|+|++|++++..|..|..+++|++|+|
T Consensus 31 ~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L 109 (193)
T 2wfh_A 31 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSL 109 (193)
T ss_dssp TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEEC
Confidence 57999999999997 56789999999999999999999998999999999999999999999988899999999999999
Q ss_pred cCCcCcccCCccccCCCCCCEEEccCCcCCc
Q 003926 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYG 217 (786)
Q Consensus 187 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 217 (786)
++|.+++..+..|..+++|+.|+|++|.+..
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 110 HGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 9999998777789999999999999999874
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.58 E-value=5.6e-16 Score=166.11 Aligned_cols=152 Identities=13% Similarity=0.115 Sum_probs=101.5
Q ss_pred HHHHHhcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCC--------------CChHHHHHHHHHHhcCCCCCcc
Q 003926 471 ELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKC--------------HSTRNFMHHIELISKLRHRHLV 536 (786)
Q Consensus 471 ~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~--------------~~~~~f~~E~~~l~~l~H~NIv 536 (786)
.+...-.-|.+...||+|+||.||+|..++|+.||||+++.... .....++.++++.....|+|++
T Consensus 89 ~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~ 168 (397)
T 4gyi_A 89 THAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMK 168 (397)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHH
Confidence 33333344888999999999999999988999999998764211 0112333444333333444444
Q ss_pred eeeeeeeeccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCc
Q 003926 537 SALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITD 616 (786)
Q Consensus 537 ~l~g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~N 616 (786)
+++.........- .....+|||||+++++|.++... . ....++.|++.+|.|||+. +||||||||.|
T Consensus 169 rL~~~gv~vp~p~-~~~~~~LVME~i~G~~L~~l~~~-------~--~~~~l~~qll~~l~~lH~~---gIVHrDLKp~N 235 (397)
T 4gyi_A 169 ALYEEGFPVPEPI-AQSRHTIVMSLVDALPMRQVSSV-------P--DPASLYADLIALILRLAKH---GLIHGDFNEFN 235 (397)
T ss_dssp HHHHTTCSCCCEE-EEETTEEEEECCSCEEGGGCCCC-------S--CHHHHHHHHHHHHHHHHHT---TEECSCCSTTS
T ss_pred HHHhcCCCCCeee-eccCceEEEEecCCccHhhhccc-------H--HHHHHHHHHHHHHHHHHHC---CCcCCCCCHHH
Confidence 4432211100000 00123799999999998765432 1 1245788999999999997 99999999999
Q ss_pred eeecCCCc----------ccccCCCcccc
Q 003926 617 ILLDQNLV----------AKISSYNLPLL 635 (786)
Q Consensus 617 ILld~~~~----------~kl~DfGl~~~ 635 (786)
||+++++. +.|.||+-+..
T Consensus 236 ILl~~dgd~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 236 ILIREEKDAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp EEEEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred EEEeCCCCcccccccccceEEEEeCCccc
Confidence 99998773 78999997643
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.56 E-value=3.3e-17 Score=161.99 Aligned_cols=82 Identities=26% Similarity=0.316 Sum_probs=36.2
Q ss_pred CCCEEeccCCCCCCCCCc------cccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCC
Q 003926 132 SLEILNMSSNFLNGAIPQ------ELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENL 205 (786)
Q Consensus 132 ~L~~L~Ls~N~l~~~~p~------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 205 (786)
.++.++++.|.++|.+|. .+..+++|++|+|++|.+++ +| .+..+++|+.|+|++|.++ .+|..+..+++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 344444444444444333 44444444444444444443 33 4444444444444444444 234334444444
Q ss_pred CEEEccCCcCC
Q 003926 206 RVLALSNNHFY 216 (786)
Q Consensus 206 ~~L~Ls~N~l~ 216 (786)
+.|+|++|+++
T Consensus 96 ~~L~L~~N~l~ 106 (198)
T 1ds9_A 96 EELWISYNQIA 106 (198)
T ss_dssp SEEEEEEEECC
T ss_pred CEEECcCCcCC
Confidence 44444444444
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.56 E-value=3e-15 Score=144.86 Aligned_cols=132 Identities=20% Similarity=0.227 Sum_probs=109.1
Q ss_pred ccCCCCCCCEEEccCCCCccCCCccCCCCC-CCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCC
Q 003926 102 TLVKLPDLKVLRLVSLGLWGPLSGKISRLS-SLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPI 180 (786)
Q Consensus 102 ~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 180 (786)
.+.++++|+.|+|++|++... |. +..+. +|+.|+|++|.+++. ..+..+++|++|+|++|++++..|..|..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~i-~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPVI-EN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCCSC-CC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCchh-HH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 456788999999999999854 54 44444 999999999999876 67889999999999999998766666789999
Q ss_pred CCEEEccCCcCcccCCc--cccCCCCCCEEEccCCcCCcCCCC----CCCCCcCCEEEcccCCC
Q 003926 181 LAVLSLRNNMFNGTLPD--SFSYLENLRVLALSNNHFYGEVPD----FSGLTYLQVLDLENNAL 238 (786)
Q Consensus 181 L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~----~~~l~~L~~L~L~~N~l 238 (786)
|++|+|++|.+. .+|. .+..+++|+.|++++|.++...+. +..+++|+.||+++|.+
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCH
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCH
Confidence 999999999996 4665 788999999999999999855443 77889999999988865
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.54 E-value=8.5e-17 Score=159.04 Aligned_cols=155 Identities=23% Similarity=0.219 Sum_probs=105.0
Q ss_pred ccCCCCCcEEEcccccCCCCCCc------ccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCC
Q 003926 151 LSILTSLQTLILDENMLAGRVPD------WLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSG 224 (786)
Q Consensus 151 ~~~l~~L~~L~L~~N~l~~~~p~------~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 224 (786)
+.....++.++++.|.++|.+|. .|..+++|++|+|++|.+++ +| .+.++++|+.|+|++|.++.....+..
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~l~~~~~~ 91 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKKIENLDAV 91 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECSCSSHHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcccccchhhc
Confidence 44556677777777777777765 67777777777777777765 55 677777777777777777632222444
Q ss_pred CCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCc-hhhCCCCCCcEEEee
Q 003926 225 LTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFP-QALLSLPSITYLNIA 303 (786)
Q Consensus 225 l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~ 303 (786)
+++|++|+|++|.++ + +| .+..+++|+.|+|++|++++..+ ..+..+++|+.|+++
T Consensus 92 ~~~L~~L~L~~N~l~---------------------~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~ 148 (198)
T 1ds9_A 92 ADTLEELWISYNQIA---------------------S-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLA 148 (198)
T ss_dssp HHHCSEEEEEEEECC---------------------C-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEEC
T ss_pred CCcCCEEECcCCcCC---------------------c-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEec
Confidence 566666666666553 3 34 46677788888888888875332 467788888888888
Q ss_pred cCCCCcccCcc----------CCCCCCCCEEeCcCCcCC
Q 003926 304 DNKLTGKLFDD----------LSCNPELGFVDLSSNLLT 332 (786)
Q Consensus 304 ~N~l~g~~~~~----------~~~~~~L~~l~ls~N~l~ 332 (786)
+|.+++.+|.. +..+++|+.|| +|.++
T Consensus 149 ~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 149 GNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp SCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred CCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 88887766543 56677777776 55554
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=99.53 E-value=7.8e-17 Score=187.29 Aligned_cols=275 Identities=13% Similarity=0.054 Sum_probs=157.8
Q ss_pred CCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCC--CccC-CCccCCCCCCCCEEeccCCCCCCCCCcc
Q 003926 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLG--LWGP-LSGKISRLSSLEILNMSSNFLNGAIPQE 150 (786)
Q Consensus 74 ~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~--l~g~-~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 150 (786)
.+++.|+++++.+++.-+. .++.....+++|+.|+|++|. +... ++..+.++++|+.|+|++|...+.+|..
T Consensus 156 ~~L~~L~L~~~~i~~~~~~-----~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~ 230 (594)
T 2p1m_B 156 RNLKELDLRESDVDDVSGH-----WLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATL 230 (594)
T ss_dssp TTCCEEECTTCEEECCCGG-----GGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHH
T ss_pred CCCCEEeCcCCccCCcchH-----HHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHH
Confidence 4788999988765432111 122223366677777777765 2111 1112234577777777776322225555
Q ss_pred ccCCCCCcEEEccccc--------------------------CC----CCCCcccCCCCCCCEEEccCCcCcccCC-ccc
Q 003926 151 LSILTSLQTLILDENM--------------------------LA----GRVPDWLGSLPILAVLSLRNNMFNGTLP-DSF 199 (786)
Q Consensus 151 ~~~l~~L~~L~L~~N~--------------------------l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~ 199 (786)
+..+++|+.|+++.+. +. +.+|..+..+++|+.|+|++|.+++... ..+
T Consensus 231 ~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~ 310 (594)
T 2p1m_B 231 LQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLL 310 (594)
T ss_dssp HHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHH
T ss_pred HhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHH
Confidence 5556666666544331 11 1234444467788888888887664322 235
Q ss_pred cCCCCCCEEEccCCcCCc-CCCC-CCCCCcCCEEEccc---------CCCCCCCC----ccccchhhhhccCCccCCcCh
Q 003926 200 SYLENLRVLALSNNHFYG-EVPD-FSGLTYLQVLDLEN---------NALGPQFP----KVGKKLVTMILSKNKFRSAIP 264 (786)
Q Consensus 200 ~~l~~L~~L~Ls~N~l~~-~~p~-~~~l~~L~~L~L~~---------N~l~~~~p----~~~~~L~~L~ls~N~l~~~~p 264 (786)
.++++|+.|++++| ++. .++. ...+++|+.|+|++ |.++.... ...++|+.|+++.|.+++..+
T Consensus 311 ~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~ 389 (594)
T 2p1m_B 311 CQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAAL 389 (594)
T ss_dssp TTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHH
T ss_pred hcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHH
Confidence 57788888888877 331 1222 22467788887743 33322111 113567777777777766555
Q ss_pred hhhc-Cccccceeecc--C----ccccC-----CCchhhCCCCCCcEEEeecCCCCcccCccCCC-CCCCCEEeCcCCcC
Q 003926 265 AEVS-SYYQLQRLDLS--S----NRFVG-----PFPQALLSLPSITYLNIADNKLTGKLFDDLSC-NPELGFVDLSSNLL 331 (786)
Q Consensus 265 ~~~~-~l~~L~~L~Ls--~----N~l~~-----~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~-~~~L~~l~ls~N~l 331 (786)
..+. .+++|+.|+|+ + |++++ .++..+..+++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+
T Consensus 390 ~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i 468 (594)
T 2p1m_B 390 ITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGD 468 (594)
T ss_dssp HHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCS
T ss_pred HHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCC
Confidence 5554 46777777777 3 45542 1223356677777777766 566555444443 66777777777777
Q ss_pred CccCChhh-hcCCCCcEEEcCCccc
Q 003926 332 TGQLPNCL-LAGSKNRVVLYARNCL 355 (786)
Q Consensus 332 ~g~~p~~~-~~~~~~~~~~~~~N~l 355 (786)
++..+..+ ..+++++.+++++|.+
T Consensus 469 ~~~~~~~l~~~~~~L~~L~L~~n~~ 493 (594)
T 2p1m_B 469 SDLGMHHVLSGCDSLRKLEIRDCPF 493 (594)
T ss_dssp SHHHHHHHHHHCTTCCEEEEESCSC
T ss_pred cHHHHHHHHhcCCCcCEEECcCCCC
Confidence 65544444 4466777777777766
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.52 E-value=1.5e-14 Score=139.84 Aligned_cols=40 Identities=20% Similarity=0.287 Sum_probs=19.5
Q ss_pred hcCccccceeeccCccccCCCch----hhCCCCCCcEEEeecCCC
Q 003926 267 VSSYYQLQRLDLSSNRFVGPFPQ----ALLSLPSITYLNIADNKL 307 (786)
Q Consensus 267 ~~~l~~L~~L~Ls~N~l~~~~p~----~~~~l~~L~~L~l~~N~l 307 (786)
+..+++|+.|+|++|.++. +|. .+..+++|+.||+++|.+
T Consensus 109 l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 109 LASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp GGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCH
T ss_pred hhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCH
Confidence 4444555555555555542 233 244555555555555544
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=99.52 E-value=2.9e-16 Score=182.43 Aligned_cols=244 Identities=15% Similarity=0.138 Sum_probs=107.6
Q ss_pred CCEEEEEeCCCCCCCCCCCCCcCCccccccC-CCCCCCEEEccCC-CCccC-CCccCCCCCCCCEEeccCCCCCCCCCcc
Q 003926 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLV-KLPDLKVLRLVSL-GLWGP-LSGKISRLSSLEILNMSSNFLNGAIPQE 150 (786)
Q Consensus 74 ~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~-~l~~L~~L~L~~n-~l~g~-~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 150 (786)
.+++.|+|+++.+++.. +..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..
T Consensus 105 ~~L~~L~L~~~~~~~~~---------~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~ 175 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDC---------LELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHW 175 (594)
T ss_dssp TTCCEEEEESCBCCHHH---------HHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGG
T ss_pred CCCCeEEeeCcEEcHHH---------HHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHH
Confidence 35677777766533211 11222 3455555555555 33221 2233334555555555555554433322
Q ss_pred c----cCCCCCcEEEccccc--CCC-CCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCc---------
Q 003926 151 L----SILTSLQTLILDENM--LAG-RVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNH--------- 214 (786)
Q Consensus 151 ~----~~l~~L~~L~L~~N~--l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~--------- 214 (786)
+ ..+++|+.|+|++|. +.. .++..+..+++|+.|+|++|...+.+|..+.++++|+.|+++.+.
T Consensus 176 l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~ 255 (594)
T 2p1m_B 176 LSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYS 255 (594)
T ss_dssp GGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHH
T ss_pred HHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHH
Confidence 2 244455555555554 110 011112334555555555552111234444444444444433221
Q ss_pred -----------------CCc----CCCC-CCCCCcCCEEEcccCCCCCCCCc----cccchhhhhccCCccCC-cChhhh
Q 003926 215 -----------------FYG----EVPD-FSGLTYLQVLDLENNALGPQFPK----VGKKLVTMILSKNKFRS-AIPAEV 267 (786)
Q Consensus 215 -----------------l~~----~~p~-~~~l~~L~~L~L~~N~l~~~~p~----~~~~L~~L~ls~N~l~~-~~p~~~ 267 (786)
+.. .++. +..+++|+.|+|++|.+++.... ..++|+.|++++| ++. .++...
T Consensus 256 ~l~~~l~~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~ 334 (594)
T 2p1m_B 256 GLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLA 334 (594)
T ss_dssp HHHHHHHTCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHH
T ss_pred HHHHHHhcCCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHH
Confidence 000 0111 12346667777766665432111 2345666666655 221 122222
Q ss_pred cCccccceeec---------cCccccCCCchhhC-CCCCCcEEEeecCCCCcccCccCC-CCCCCCEEeCc
Q 003926 268 SSYYQLQRLDL---------SSNRFVGPFPQALL-SLPSITYLNIADNKLTGKLFDDLS-CNPELGFVDLS 327 (786)
Q Consensus 268 ~~l~~L~~L~L---------s~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~g~~~~~~~-~~~~L~~l~ls 327 (786)
..+++|+.|+| +.|.+++.....+. .+++|+.|+++.|++++..+..+. .+++|+.|+++
T Consensus 335 ~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~ 405 (594)
T 2p1m_B 335 STCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLC 405 (594)
T ss_dssp HHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEE
T ss_pred HhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEee
Confidence 34555666655 22344332222222 255566666555665554443332 34556666665
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.51 E-value=1.7e-14 Score=154.50 Aligned_cols=235 Identities=16% Similarity=0.181 Sum_probs=145.7
Q ss_pred CCCCCEEEccCCCCc--cCCCccCCCCCCCCEEeccCCCCCCCCCccccC--------CCCCcEEEcccccCCCCCCccc
Q 003926 106 LPDLKVLRLVSLGLW--GPLSGKISRLSSLEILNMSSNFLNGAIPQELSI--------LTSLQTLILDENMLAGRVPDWL 175 (786)
Q Consensus 106 l~~L~~L~L~~n~l~--g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~--------l~~L~~L~L~~N~l~~~~p~~~ 175 (786)
+++|+.|||++|++. ...++.+ +.+..+.+..|.+ .+..|.+ |++|+.|+|.+ .++..-+..|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~~I---~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF 120 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMANFV---PAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAF 120 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTTEE---CTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTT
T ss_pred hccCeEEecCcceeEEecCccccc---ccccccccccccc---CHHHhcccccccccccCCCcEEECCc-cccchhHHHh
Confidence 667777777777776 2222222 2234444444422 2344555 77777777777 6665555677
Q ss_pred CCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCC---cCCC--CCCCCCcC----------------------
Q 003926 176 GSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFY---GEVP--DFSGLTYL---------------------- 228 (786)
Q Consensus 176 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~---~~~p--~~~~l~~L---------------------- 228 (786)
.+|++|+.|++++|.+....+..|.++.++..+.+..+... ..+. .|.++..|
T Consensus 121 ~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~ 200 (329)
T 3sb4_A 121 KGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQ 200 (329)
T ss_dssp TTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCC
T ss_pred hcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccC
Confidence 77777777777777777666667777666666665542210 0011 13233333
Q ss_pred ----CEEEcccCCCCCCCC---ccccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCc-EE
Q 003926 229 ----QVLDLENNALGPQFP---KVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSIT-YL 300 (786)
Q Consensus 229 ----~~L~L~~N~l~~~~p---~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-~L 300 (786)
+.+.+.++-....+. ....+|+.++|++|+++...+..|.++.+|+.|+|.+| +...-+.+|.++++|+ .|
T Consensus 201 ~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l 279 (329)
T 3sb4_A 201 PRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTL 279 (329)
T ss_dssp GGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEE
T ss_pred ccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEE
Confidence 333333321100000 01356778888888887766677888888888888887 7666667788888888 88
Q ss_pred EeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEE
Q 003926 301 NIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVL 349 (786)
Q Consensus 301 ~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~ 349 (786)
++.+ +++...+..|..+++|+.+++++|+++..-+..+..+.+++.+.
T Consensus 280 ~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 280 ELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 8877 67766677788888888888888888765566666666666553
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.49 E-value=1.2e-13 Score=132.79 Aligned_cols=106 Identities=24% Similarity=0.245 Sum_probs=58.2
Q ss_pred CEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCC
Q 003926 110 KVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNN 189 (786)
Q Consensus 110 ~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 189 (786)
+.|++++|+++. +|..+ .++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|
T Consensus 12 ~~l~~s~n~l~~-ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-cCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 345555555544 23333 255566666666666555555555666666666666655544455555555666666666
Q ss_pred cCcccCCccccCCCCCCEEEccCCcCCcC
Q 003926 190 MFNGTLPDSFSYLENLRVLALSNNHFYGE 218 (786)
Q Consensus 190 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 218 (786)
+|++..+..|.++++|+.|+|++|.++..
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 55554444455555555555555555443
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.47 E-value=2.4e-13 Score=131.07 Aligned_cols=104 Identities=21% Similarity=0.267 Sum_probs=54.8
Q ss_pred EEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCc
Q 003926 111 VLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNM 190 (786)
Q Consensus 111 ~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 190 (786)
.+++++|++. .+|..+. ++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|++|+|++|+
T Consensus 16 ~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 92 (174)
T 2r9u_A 16 LVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92 (174)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCc
Confidence 3444444442 2333332 455555555555555555555555555555555555554444445555555555555555
Q ss_pred CcccCCccccCCCCCCEEEccCCcCCc
Q 003926 191 FNGTLPDSFSYLENLRVLALSNNHFYG 217 (786)
Q Consensus 191 l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 217 (786)
|++..+..|.++++|+.|+|++|.+..
T Consensus 93 l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 93 LKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred cceeCHHHhccccCCCEEEeCCCCccc
Confidence 554444445555555555555555543
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.44 E-value=5.3e-13 Score=128.64 Aligned_cols=106 Identities=25% Similarity=0.301 Sum_probs=95.3
Q ss_pred CCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccC
Q 003926 133 LEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSN 212 (786)
Q Consensus 133 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 212 (786)
-+.+++++|.++ .+|..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|+.|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 378999999996 6777664 8999999999999999999999999999999999999987777789999999999999
Q ss_pred CcCCcCCCC-CCCCCcCCEEEcccCCCCCC
Q 003926 213 NHFYGEVPD-FSGLTYLQVLDLENNALGPQ 241 (786)
Q Consensus 213 N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~ 241 (786)
|+|++.++. |..+++|++|+|++|.+...
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 999987776 89999999999999988643
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.43 E-value=3.3e-13 Score=129.56 Aligned_cols=108 Identities=19% Similarity=0.181 Sum_probs=83.4
Q ss_pred CEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCC
Q 003926 229 QVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLT 308 (786)
Q Consensus 229 ~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 308 (786)
+.|++++|.++..+....++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|+
T Consensus 12 ~~l~~s~n~l~~ip~~~~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~ 91 (170)
T 3g39_A 12 TTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLK 91 (170)
T ss_dssp TEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CEEEeCCCCcCccCccCCCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccC
Confidence 34444444444332233345555666666666777888889999999999999999888888899999999999999999
Q ss_pred cccCccCCCCCCCCEEeCcCCcCCccCC
Q 003926 309 GKLFDDLSCNPELGFVDLSSNLLTGQLP 336 (786)
Q Consensus 309 g~~~~~~~~~~~L~~l~ls~N~l~g~~p 336 (786)
+..+..+..+++|+.|+|++|.++...+
T Consensus 92 ~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 92 SIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred EeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 8888788899999999999999986654
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.41 E-value=4.2e-13 Score=143.65 Aligned_cols=100 Identities=15% Similarity=0.104 Sum_probs=70.3
Q ss_pred CCcCCEEEcccCCCCCCCCcc---ccchhhhhccCCccCCcChhhhcCccccc-eeeccCccccCCCchhhCCCCCCcEE
Q 003926 225 LTYLQVLDLENNALGPQFPKV---GKKLVTMILSKNKFRSAIPAEVSSYYQLQ-RLDLSSNRFVGPFPQALLSLPSITYL 300 (786)
Q Consensus 225 l~~L~~L~L~~N~l~~~~p~~---~~~L~~L~ls~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L 300 (786)
+++|+.|+|++|+++...+.. +.+|+.+++.+| ++..-+..|.++.+|+ .|+|.+ +++..-+.+|.++++|+.|
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 344555555555443222221 234555555554 5555566788899998 999988 7776777889999999999
Q ss_pred EeecCCCCcccCccCCCCCCCCEEeC
Q 003926 301 NIADNKLTGKLFDDLSCNPELGFVDL 326 (786)
Q Consensus 301 ~l~~N~l~g~~~~~~~~~~~L~~l~l 326 (786)
++++|+++...+..|..+++|+.++.
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred EeCCCccCccchhhhcCCcchhhhcc
Confidence 99999999888888988999988763
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=99.38 E-value=1e-11 Score=136.01 Aligned_cols=214 Identities=12% Similarity=0.042 Sum_probs=106.5
Q ss_pred CCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEcc
Q 003926 108 DLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLR 187 (786)
Q Consensus 108 ~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 187 (786)
+|+.+.|..+ +...-...|.+. +|+.++|.. .++..-+..|.+|++|+.++|+.|.++......|. .++|+.+.|.
T Consensus 136 ~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp 211 (401)
T 4fdw_A 136 QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLP 211 (401)
T ss_dssp CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECC
T ss_pred CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeC
Confidence 5666666544 555555556553 466666664 45545555666666666666666666543334444 4666666666
Q ss_pred CCcCcccCCccccCCCCCCEEEccCCcCCcCCC-CCCCCCcCCEEEcccCCCCCC---CCccccchhhhhccCCccC---
Q 003926 188 NNMFNGTLPDSFSYLENLRVLALSNNHFYGEVP-DFSGLTYLQVLDLENNALGPQ---FPKVGKKLVTMILSKNKFR--- 260 (786)
Q Consensus 188 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~---~p~~~~~L~~L~ls~N~l~--- 260 (786)
+| +...-...|.++++|+.++|..| ++..-. .|.+ ++|+.+.|.++ +... ....+.+|+.+++.+|.+.
T Consensus 212 ~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp~~-i~~I~~~aF~~c~~L~~l~l~~~~~~~~~ 287 (401)
T 4fdw_A 212 VT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLPNG-VTNIASRAFYYCPELAEVTTYGSTFNDDP 287 (401)
T ss_dssp TT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEETT-CCEECTTTTTTCTTCCEEEEESSCCCCCT
T ss_pred Cc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeCCC-ccEEChhHhhCCCCCCEEEeCCccccCCc
Confidence 33 55444555666666666666654 221111 2444 55666666322 2211 1111234444444444432
Q ss_pred --CcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCC
Q 003926 261 --SAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLT 332 (786)
Q Consensus 261 --~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~ 332 (786)
..-+..|.++++|+.++|. |.+...-..+|.++++|+.++|..| ++..-...|..+ +|+.+++++|.+.
T Consensus 288 ~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~ 358 (401)
T 4fdw_A 288 EAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPP 358 (401)
T ss_dssp TCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCC
T ss_pred ccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCc
Confidence 2223344555555555555 2344333444555555555555332 433334444444 5555555555443
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=99.30 E-value=3.6e-11 Score=131.74 Aligned_cols=219 Identities=10% Similarity=0.068 Sum_probs=171.8
Q ss_pred cCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCC
Q 003926 103 LVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILA 182 (786)
Q Consensus 103 l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 182 (786)
+.+ .+|+.+.|.+ .+...-+..|.++++|+.++|+.|.++......|. +++|+.+.|..| ++..-...|.++++|+
T Consensus 154 F~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~ 229 (401)
T 4fdw_A 154 FFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLK 229 (401)
T ss_dssp TTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCC
T ss_pred cCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCC
Confidence 444 4799999986 77777788999999999999999999976666776 699999999855 7656667899999999
Q ss_pred EEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCC-CCCCCCCcCCEEEcccCCCCCC----CC----ccccchhhhh
Q 003926 183 VLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEV-PDFSGLTYLQVLDLENNALGPQ----FP----KVGKKLVTMI 253 (786)
Q Consensus 183 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~l~~L~~L~L~~N~l~~~----~p----~~~~~L~~L~ 253 (786)
.+++..| ++..-...|.+ .+|+.+.|.+ .++... ..|.++++|+.+++.+|.+... ++ ..+.+|+.+.
T Consensus 230 ~l~l~~~-l~~I~~~aF~~-~~L~~i~lp~-~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~ 306 (401)
T 4fdw_A 230 TIEIPEN-VSTIGQEAFRE-SGITTVKLPN-GVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFE 306 (401)
T ss_dssp CEECCTT-CCEECTTTTTT-CCCSEEEEET-TCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEEC
T ss_pred EEecCCC-ccCcccccccc-CCccEEEeCC-CccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEE
Confidence 9999975 56566677887 7899999954 454332 2499999999999999876511 22 2346899999
Q ss_pred ccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCC-CCCEEeCcCCcC
Q 003926 254 LSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNP-ELGFVDLSSNLL 331 (786)
Q Consensus 254 ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~-~L~~l~ls~N~l 331 (786)
+. |.++..-...|.++.+|+.|+|..| ++..-+.+|.++ +|+.|++++|.+.......|..++ .+..|.+..|.+
T Consensus 307 l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 307 IP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp CC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred eC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 98 5577777788999999999999665 776667889999 999999999988766666666553 566666655543
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.30 E-value=4.9e-12 Score=136.36 Aligned_cols=88 Identities=24% Similarity=0.216 Sum_probs=39.1
Q ss_pred CCCCCCCCEEeccC-CCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCC
Q 003926 127 ISRLSSLEILNMSS-NFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENL 205 (786)
Q Consensus 127 ~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 205 (786)
|..+++|+.|+|++ |+|++..|..|.+|++|+.|+|++|+|++..|..|.+|++|+.|+|++|+|++..+..|..++ |
T Consensus 27 l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L 105 (347)
T 2ifg_A 27 LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-L 105 (347)
T ss_dssp SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-C
T ss_pred CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-c
Confidence 44444444444443 444444444444444444444444444444444444444444444444444433333333332 4
Q ss_pred CEEEccCCcC
Q 003926 206 RVLALSNNHF 215 (786)
Q Consensus 206 ~~L~Ls~N~l 215 (786)
+.|+|++|.+
T Consensus 106 ~~l~l~~N~~ 115 (347)
T 2ifg_A 106 QELVLSGNPL 115 (347)
T ss_dssp CEEECCSSCC
T ss_pred eEEEeeCCCc
Confidence 4444444433
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.26 E-value=1.3e-11 Score=133.04 Aligned_cols=105 Identities=23% Similarity=0.150 Sum_probs=92.1
Q ss_pred CEEeccCC-CCCCCCCccccCCCCCcEEEccc-ccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEcc
Q 003926 134 EILNMSSN-FLNGAIPQELSILTSLQTLILDE-NMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALS 211 (786)
Q Consensus 134 ~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 211 (786)
..++++++ +|++ +|. +..+++|+.|+|++ |+|++..|..|.+|++|+.|+|++|+|++..|..|.+|++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35688888 8885 777 99999999999996 99998888999999999999999999999999999999999999999
Q ss_pred CCcCCcCCCCCCCCCcCCEEEcccCCCCC
Q 003926 212 NNHFYGEVPDFSGLTYLQVLDLENNALGP 240 (786)
Q Consensus 212 ~N~l~~~~p~~~~l~~L~~L~L~~N~l~~ 240 (786)
+|+|++.++.......|+.|+|++|.+..
T Consensus 89 ~N~l~~~~~~~~~~~~L~~l~l~~N~~~c 117 (347)
T 2ifg_A 89 FNALESLSWKTVQGLSLQELVLSGNPLHC 117 (347)
T ss_dssp SSCCSCCCSTTTCSCCCCEEECCSSCCCC
T ss_pred CCccceeCHHHcccCCceEEEeeCCCccC
Confidence 99999877764333349999999998854
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.21 E-value=8.8e-14 Score=151.03 Aligned_cols=68 Identities=19% Similarity=0.164 Sum_probs=33.0
Q ss_pred hhcCccccceeeccCccccC----CCchhhCCCCCCcEEEeecCCCCcccCccCC---CCC--CCCEEe--CcCCcCCc
Q 003926 266 EVSSYYQLQRLDLSSNRFVG----PFPQALLSLPSITYLNIADNKLTGKLFDDLS---CNP--ELGFVD--LSSNLLTG 333 (786)
Q Consensus 266 ~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~---~~~--~L~~l~--ls~N~l~g 333 (786)
.+...++|+.|||++|.|+. .++..+...++|++|+|++|.|++.....+. ... .|+.+. +..|.++.
T Consensus 206 ~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~~~L~~l~~ll~~~~~~~ 284 (372)
T 3un9_A 206 QLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTEGTAVSE 284 (372)
T ss_dssp HGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHHHCC------CEEECCCC----CHH
T ss_pred HHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHHHHhcCCCccchhhHhhhcCCccCH
Confidence 34444556666666666653 2334444556677777777776644332221 112 156666 66666653
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.18 E-value=9.1e-14 Score=150.91 Aligned_cols=78 Identities=18% Similarity=0.125 Sum_probs=57.0
Q ss_pred hhhhcCccccceeeccCccccC----CCchhhCCCCCCcEEEeecCCCCcc----cCccCCCCCCCCEEeCcCCcCCccC
Q 003926 264 PAEVSSYYQLQRLDLSSNRFVG----PFPQALLSLPSITYLNIADNKLTGK----LFDDLSCNPELGFVDLSSNLLTGQL 335 (786)
Q Consensus 264 p~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~g~----~~~~~~~~~~L~~l~ls~N~l~g~~ 335 (786)
+..+...++|++|||++|.|.. .++..+...++|+.|+|++|.|++. +...+..++.|+.|||++|.|+..-
T Consensus 176 ~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g 255 (372)
T 3un9_A 176 MEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEG 255 (372)
T ss_dssp HHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHH
T ss_pred HHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHH
Confidence 3445566778888888888764 2356677888999999999999864 3344556788999999999998654
Q ss_pred Chhhhc
Q 003926 336 PNCLLA 341 (786)
Q Consensus 336 p~~~~~ 341 (786)
...+..
T Consensus 256 ~~~L~~ 261 (372)
T 3un9_A 256 RQVLRD 261 (372)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444433
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.12 E-value=1.6e-10 Score=119.19 Aligned_cols=146 Identities=9% Similarity=-0.020 Sum_probs=110.4
Q ss_pred HHHHhcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCC-CCCcceeeeeeeeccccCC
Q 003926 472 LEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLR-HRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 472 l~~~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~NIv~l~g~~~~~~~~~~ 550 (786)
+.....+|.....+|.|+.+.||+.... |..+++|+...........+.+|+++++.++ |..+.++++++..
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~------ 81 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERH------ 81 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEE------
T ss_pred HHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEec------
Confidence 3344567777788898999999999865 6789999987543233456889999999885 6677788887654
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcC----------------------------
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTG---------------------------- 602 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~---------------------------- 602 (786)
.+..|+||||++|.+|.+.+.. ......++.+++++++.||+-
T Consensus 82 -~~~~~lv~e~i~G~~l~~~~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (263)
T 3tm0_A 82 -DGWSNLLMSEADGVLCSEEYED--------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLAD 152 (263)
T ss_dssp -TTEEEEEEECCSSEEHHHHCCT--------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSC
T ss_pred -CCceEEEEEecCCeehhhccCC--------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccc
Confidence 3467999999999999876421 112346778899999999971
Q ss_pred ----------------------------CCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 603 ----------------------------IVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 603 ----------------------------~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..+.++|+|+++.||+++++..+.|.||+.+
T Consensus 153 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a 211 (263)
T 3tm0_A 153 VDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRS 211 (263)
T ss_dssp CSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTC
T ss_pred cccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhc
Confidence 0135899999999999988766779999865
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=98.98 E-value=4.5e-10 Score=115.37 Aligned_cols=136 Identities=15% Similarity=0.100 Sum_probs=96.0
Q ss_pred CCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCc--ceeeeeeeeccccCCCCceE
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHL--VSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NI--v~l~g~~~~~~~~~~~~~~~ 555 (786)
++......+.|..+.||+....+|..+++|..... ....+.+|+++++.+++.++ .+++++... .+..
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~-------~~~~ 90 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTE-------AGRD 90 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEEC-------SSCE
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccC-------CCCC
Confidence 34333333456669999998777888999987643 23457889999999865554 446765442 2457
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCC--------------------------------
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI-------------------------------- 603 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~-------------------------------- 603 (786)
++||||+++.+|. ... .+ ...++.++++.|+.||+..
T Consensus 91 ~~v~e~i~G~~l~--~~~------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (264)
T 1nd4_A 91 WLLLGEVPGQDLL--SSH------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLD 159 (264)
T ss_dssp EEEEECCSSEETT--TSC------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCC
T ss_pred EEEEEecCCcccC--cCc------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhh
Confidence 9999999998884 211 11 2256667777788887631
Q ss_pred -----------------------CCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 604 -----------------------VPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 604 -----------------------~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.+.++|+|+++.||+++++..++|.|||.+.
T Consensus 160 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 160 EEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp GGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1239999999999999988777899999753
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.87 E-value=5e-10 Score=120.47 Aligned_cols=14 Identities=14% Similarity=-0.019 Sum_probs=7.4
Q ss_pred cCCCCCCCEEEccC
Q 003926 103 LVKLPDLKVLRLVS 116 (786)
Q Consensus 103 l~~l~~L~~L~L~~ 116 (786)
+.++++|+.|.+.+
T Consensus 135 ~~~l~~L~~L~l~~ 148 (362)
T 2ra8_A 135 KEKFAHFEGLFWGD 148 (362)
T ss_dssp HHHHTTCSEEEECC
T ss_pred hhhcchhhheeecC
Confidence 34455666665544
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.79 E-value=1.6e-09 Score=116.58 Aligned_cols=182 Identities=15% Similarity=0.170 Sum_probs=106.8
Q ss_pred cCCCCCCCCEEeccCCCCC---------CCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCC
Q 003926 126 KISRLSSLEILNMSSNFLN---------GAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLP 196 (786)
Q Consensus 126 ~~~~l~~L~~L~Ls~N~l~---------~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 196 (786)
++..+++|+.|.+..+... +.++..+..+++|+.|+|++|.-. .++. +. +++|+.|+|..|.+....-
T Consensus 134 s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l 210 (362)
T 2ra8_A 134 NKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVV 210 (362)
T ss_dssp THHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHH
T ss_pred hhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHH
Confidence 4556778888887665431 234455677788888888887311 2333 33 7888999888877654332
Q ss_pred cccc--CCCCCCEEEccC--CcCCcC--C----CCC--CCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcCh
Q 003926 197 DSFS--YLENLRVLALSN--NHFYGE--V----PDF--SGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIP 264 (786)
Q Consensus 197 ~~~~--~l~~L~~L~Ls~--N~l~~~--~----p~~--~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p 264 (786)
..+. .+++|+.|+|+. |...+. + +.+ ..+++|++|+|++|.++...+.. +
T Consensus 211 ~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~-----------------l- 272 (362)
T 2ra8_A 211 EDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEM-----------------F- 272 (362)
T ss_dssp HHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHH-----------------H-
T ss_pred HHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHH-----------------H-
Confidence 3333 688888888863 222221 1 112 24678888888887764211000 0
Q ss_pred hhhcCccccceeeccCccccCC----CchhhCCCCCCcEEEeecCCCCcccCccCCC-CCCCCEEeCcCCc
Q 003926 265 AEVSSYYQLQRLDLSSNRFVGP----FPQALLSLPSITYLNIADNKLTGKLFDDLSC-NPELGFVDLSSNL 330 (786)
Q Consensus 265 ~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~-~~~L~~l~ls~N~ 330 (786)
.....+++|+.|||+.|.|.+. ++..+.++++|+.|+|++|.++...-..+.. + ...++++.|+
T Consensus 273 a~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 273 LESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp HHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred HhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 0012356777888877777653 3333445677888888888776543332221 1 2457777776
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=98.78 E-value=4.6e-08 Score=107.09 Aligned_cols=218 Identities=14% Similarity=0.066 Sum_probs=97.3
Q ss_pred CccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCC
Q 003926 124 SGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLE 203 (786)
Q Consensus 124 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 203 (786)
...|.++++|+.+.+..+. ...-...|.++.+|+.+.+..| ++..-...|.++..|+.+.+..+... +.+.+....
T Consensus 155 ~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~ 230 (394)
T 4fs7_A 155 DEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKT 230 (394)
T ss_dssp TTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTC
T ss_pred hhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccC
Confidence 3456666666666665443 3244455666666666666554 33233445666666666655544322 122223334
Q ss_pred CCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCC--CCCCccccchhhhhccCCccCCcChhhhcCccccceeeccCc
Q 003926 204 NLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALG--PQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSN 281 (786)
Q Consensus 204 ~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~--~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 281 (786)
+|+.+.+..+.-.-....|.++..|+.+.+..+... .........+..+....+.+ ....|..+.+|+.+.+.++
T Consensus 231 ~l~~i~ip~~~~~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~ 307 (394)
T 4fs7_A 231 GVKNIIIPDSFTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS 307 (394)
T ss_dssp CCCEEEECTTCCEECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT
T ss_pred CCceEEECCCceecccccccccccceeEEcCCCcceeeccccccccccceeccCceee---ccccccccccccccccccc
Confidence 555555543221111112445555555555444221 11111112222222222221 1123444555555555433
Q ss_pred cccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcC
Q 003926 282 RFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYA 351 (786)
Q Consensus 282 ~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~ 351 (786)
+...-..+|.++.+|+.++|.++ ++..-...|..+.+|+.+++..| ++..-...+..+.++..+.+.
T Consensus 308 -i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp 374 (394)
T 4fs7_A 308 -VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELP 374 (394)
T ss_dssp -CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEE
T ss_pred -cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEEC
Confidence 33333344555555555555432 43333344555555555555444 332223344444555555443
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=98.75 E-value=1.5e-08 Score=109.42 Aligned_cols=147 Identities=13% Similarity=0.201 Sum_probs=105.4
Q ss_pred ccCccCCCCCceeEEEEecCCcEEEEEEec--ccCC-CChHHHHHHHHHHhcCC--CCCcceeeeeeeeccccCCCCceE
Q 003926 481 TSAFMGEGSQGQMYRGRLKNGTFVAIRCLK--MKKC-HSTRNFMHHIELISKLR--HRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 481 ~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~--~~~~-~~~~~f~~E~~~l~~l~--H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
..+.++.|.++.||+....+ ..+++|+.. .... .....+.+|+++++.++ +..+.++++++... ...+..
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~----~~~g~~ 116 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDE----SVIGRA 116 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCT----TTTSSC
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCC----CccCCe
Confidence 35678999999999998765 577888765 3221 22356888999999987 45577888776542 112347
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCC--------------------------------
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI-------------------------------- 603 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~-------------------------------- 603 (786)
|+||||+++..+.+.. ...++..++..++.++++.|+.||+..
T Consensus 117 ~~vme~v~G~~l~~~~-----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (359)
T 3dxp_A 117 FYIMEFVSGRVLWDQS-----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSET 191 (359)
T ss_dssp EEEEECCCCBCCCCTT-----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCC
T ss_pred EEEEEecCCeecCCCc-----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCC
Confidence 8999999998875421 123678888899999999999999620
Q ss_pred -----------------------CCCccccCCCCCceeecCCCc--ccccCCCcccccc
Q 003926 604 -----------------------VPGVFSNNLKITDILLDQNLV--AKISSYNLPLLAE 637 (786)
Q Consensus 604 -----------------------~~~ivHrdlk~~NILld~~~~--~kl~DfGl~~~~~ 637 (786)
.+.++|+|+++.||+++.+.. +.|.||+.+....
T Consensus 192 ~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g~ 250 (359)
T 3dxp_A 192 ESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLGH 250 (359)
T ss_dssp SCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEEC
T ss_pred cCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccCC
Confidence 246899999999999997753 6899999876543
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=98.73 E-value=9.4e-08 Score=104.59 Aligned_cols=243 Identities=13% Similarity=0.056 Sum_probs=136.6
Q ss_pred ccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEccccc---------------
Q 003926 102 TLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENM--------------- 166 (786)
Q Consensus 102 ~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~--------------- 166 (786)
.+.++++|+.+.|.. .++..-..+|.++++|+.++|..| ++..-...|.++++|+.+.+..+-
T Consensus 66 AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l~~i~~~aF~~~~~~~ 143 (394)
T 4fs7_A 66 AFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLMLKSIGVEAFKGCDFKE 143 (394)
T ss_dssp TTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTCCEECTTTTTTCCCSE
T ss_pred HhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCceeeecceeeecccccc
Confidence 355666677776653 355555566667777777776544 443444556666666555443321
Q ss_pred ------CCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCC-
Q 003926 167 ------LAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALG- 239 (786)
Q Consensus 167 ------l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~- 239 (786)
....-...|.++++|+.+.+.++. ...-...|.++++|+.+++..|--.-..-.|.++..|+.+.+..+...
T Consensus 144 ~~~~~~~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~~~~I~~~~F~~~~~L~~i~~~~~~~~i 222 (394)
T 4fs7_A 144 ITIPEGVTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRNLKIIRDYCFAECILLENMEFPNSLYYL 222 (394)
T ss_dssp EECCTTCCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTTCCEECTTTTTTCTTCCBCCCCTTCCEE
T ss_pred cccCccccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCCceEeCchhhccccccceeecCCCceEe
Confidence 111112346666777777776543 223445566667777776665511111112555555555554433211
Q ss_pred CC-----------------------CCccccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCC
Q 003926 240 PQ-----------------------FPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPS 296 (786)
Q Consensus 240 ~~-----------------------~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 296 (786)
+. ......+|+.+.+..+.. ......|..+..++.+.+..+.+. ...|..+.+
T Consensus 223 ~~~~~~~~~l~~i~ip~~~~~i~~~~f~~~~~l~~~~~~~~~~-~i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~ 298 (394)
T 4fs7_A 223 GDFALSKTGVKNIIIPDSFTELGKSVFYGCTDLESISIQNNKL-RIGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSS 298 (394)
T ss_dssp CTTTTTTCCCCEEEECTTCCEECSSTTTTCSSCCEEEECCTTC-EECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTT
T ss_pred ehhhcccCCCceEEECCCceecccccccccccceeEEcCCCcc-eeeccccccccccceeccCceeec---ccccccccc
Confidence 00 001112344444443322 223344556666666666555432 346788999
Q ss_pred CcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCc
Q 003926 297 ITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARN 353 (786)
Q Consensus 297 L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N 353 (786)
|+.+.+.++ ++..-...|..+.+|+.+++.++ ++..-...+..+.++..+.+..|
T Consensus 299 L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 299 LTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp CCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT
T ss_pred ccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc
Confidence 999999765 66555667888999999999754 65433556677788888888655
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.65 E-value=1e-10 Score=119.34 Aligned_cols=79 Identities=23% Similarity=0.282 Sum_probs=43.6
Q ss_pred cCCCCCcEEEcccccCCC--CCCcccCCCCCCCEEEccCCcCcccCCccccCCC--CCCEEEccCCcCCcCCCC------
Q 003926 152 SILTSLQTLILDENMLAG--RVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLE--NLRVLALSNNHFYGEVPD------ 221 (786)
Q Consensus 152 ~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p~------ 221 (786)
.++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|.+++.+|+
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 345566666666666655 3345555666666666666666543 2233333 666666666666655542
Q ss_pred --CCCCCcCCEEE
Q 003926 222 --FSGLTYLQVLD 232 (786)
Q Consensus 222 --~~~l~~L~~L~ 232 (786)
+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 34455666554
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=98.64 E-value=9.1e-09 Score=108.41 Aligned_cols=187 Identities=16% Similarity=0.189 Sum_probs=116.7
Q ss_pred cCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCC-CCCc--ceeeeeeeeccccCCCCceEEEE
Q 003926 482 SAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLR-HRHL--VSALGHCFECYFDDSSVSRIFLI 558 (786)
Q Consensus 482 ~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~NI--v~l~g~~~~~~~~~~~~~~~~LV 558 (786)
.+.++.|....||+.. ..+++|+.... .....+.+|+++++.+. +..+ .+.++.+.. .......|+|
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~----~~~~~~~~~v 94 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMP----SETYQMSFAG 94 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCC----CSSCSCSCEE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCC----CCCCCcceEE
Confidence 4568999999999864 45788876432 23467889999998884 3322 233332211 1111235899
Q ss_pred EecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcC------------------------------------
Q 003926 559 FEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTG------------------------------------ 602 (786)
Q Consensus 559 ~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~------------------------------------ 602 (786)
|||++|.++.+.... .++..++..++.++++.++.||+.
T Consensus 95 m~~i~G~~l~~~~~~-----~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (304)
T 3sg8_A 95 FTKIKGVPLTPLLLN-----NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQ 169 (304)
T ss_dssp EECCCCEECCHHHHH-----TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHH
T ss_pred EcccCCeECCccccc-----cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCccc
Confidence 999999888753321 356666677777777777777741
Q ss_pred -------------------CCCCccccCCCCCceeecC--CCcccccCCCccccccccccccccccc-------------
Q 003926 603 -------------------IVPGVFSNNLKITDILLDQ--NLVAKISSYNLPLLAENAEKVGHVIPY------------- 648 (786)
Q Consensus 603 -------------------~~~~ivHrdlk~~NILld~--~~~~kl~DfGl~~~~~~~~~~~~~~~~------------- 648 (786)
..+.++|+|+++.||++++ +..+.|.||+.+...+...........
T Consensus 170 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l 249 (304)
T 3sg8_A 170 MKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKIL 249 (304)
T ss_dssp HHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHH
Confidence 1245799999999999998 566789999987554322111111000
Q ss_pred --ccccC-ccccccCCCCcccceeehhHHHHHHHhCCCCC
Q 003926 649 --SGSID-PTNSARGKLEEKIDIYDFGLILLEIIVGRPLK 685 (786)
Q Consensus 649 --~~~~a-Pe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~ 685 (786)
.+... |+.... .....+.|++|.++|++.+|++++
T Consensus 250 ~~Y~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 250 NHYKHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHHTCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHcCCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence 01111 221111 112358899999999999998765
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=98.52 E-value=1.7e-06 Score=94.53 Aligned_cols=245 Identities=12% Similarity=0.100 Sum_probs=133.7
Q ss_pred ccCCCCCCCEEEccCCC---CccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCC
Q 003926 102 TLVKLPDLKVLRLVSLG---LWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSL 178 (786)
Q Consensus 102 ~l~~l~~L~~L~L~~n~---l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 178 (786)
.|.++++|+.+.+..|. +...-..+|.++.+|+.+.+..+ ++..-...|..+.+|+.+.+..+ +.......|..+
T Consensus 82 AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c 159 (394)
T 4gt6_A 82 AFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVTIPEG-VTSVADGMFSYC 159 (394)
T ss_dssp TTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTC
T ss_pred HhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhcccccccccce-eeeecccceecc
Confidence 34566666666665543 43344455666666666655443 33344455666666666666543 222333456666
Q ss_pred CCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCC------------------
Q 003926 179 PILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGP------------------ 240 (786)
Q Consensus 179 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~------------------ 240 (786)
.+|+.+.+..+ +...-...|.+ .+|+.+.+..+-..-....|.++.+|+......+....
T Consensus 160 ~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~i~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (394)
T 4gt6_A 160 YSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTRIGTNAFSECFALSTITSDSESYPAIDNVLYEKSANGDYALIR 237 (394)
T ss_dssp TTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCEECTTTTTTCTTCCEEEECCSSSCBSSSCEEEECTTSCEEEEE
T ss_pred cccccccccce-eeEeccccccc-cceeEEEECCcccccccchhhhccccceecccccccccccceeecccccccccccc
Confidence 66666666544 33222333432 34555555443322122235555555555443332110
Q ss_pred ----------CCCcc-----------ccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcE
Q 003926 241 ----------QFPKV-----------GKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITY 299 (786)
Q Consensus 241 ----------~~p~~-----------~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 299 (786)
.+|.. ..+|+.+.+..+.. ..-...|.++.+|+.+.+. +.+...-...|.++.+|+.
T Consensus 238 ~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~~-~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~ 315 (394)
T 4gt6_A 238 YPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDSVV-SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKS 315 (394)
T ss_dssp CCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTTCC-EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCE
T ss_pred cccccccceEEcCCcceEcccceeeecccccEEecccccc-eecCcccccccccccccCC-CcccccCceeecCCCCcCE
Confidence 01111 12344454443322 2334456777888888885 4455455567888888888
Q ss_pred EEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcc
Q 003926 300 LNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNC 354 (786)
Q Consensus 300 L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~ 354 (786)
++|..| ++..-...|..+.+|+.+.+..+ ++..-...+..+.++..+.+.+|.
T Consensus 316 i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~ 368 (394)
T 4gt6_A 316 IDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSR 368 (394)
T ss_dssp EECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCH
T ss_pred EEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCce
Confidence 888754 55455566777888888888654 553334456667788888777653
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.46 E-value=1e-08 Score=104.63 Aligned_cols=103 Identities=24% Similarity=0.191 Sum_probs=76.0
Q ss_pred CCCCCCE--EEccCCC---CccCCCccCCCCCCCCEEeccCCCCCC--CCCccccCCCCCcEEEcccccCCCCCCcccCC
Q 003926 105 KLPDLKV--LRLVSLG---LWGPLSGKISRLSSLEILNMSSNFLNG--AIPQELSILTSLQTLILDENMLAGRVPDWLGS 177 (786)
Q Consensus 105 ~l~~L~~--L~L~~n~---l~g~~~~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 177 (786)
..+.|+. ++++.|. +.+.++....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..
T Consensus 139 ~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~ 216 (267)
T 3rw6_A 139 SDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDK 216 (267)
T ss_dssp GCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGG
T ss_pred CCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhh
Confidence 3444444 5566663 222222233568899999999999998 5567788999999999999999875 33444
Q ss_pred CC--CCCEEEccCCcCcccCCc-------cccCCCCCCEEE
Q 003926 178 LP--ILAVLSLRNNMFNGTLPD-------SFSYLENLRVLA 209 (786)
Q Consensus 178 l~--~L~~L~Ls~N~l~~~~p~-------~~~~l~~L~~L~ 209 (786)
+. +|+.|+|++|.+.+.+|+ .+..+++|+.||
T Consensus 217 l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 217 IKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred cccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 44 999999999999987773 367889999887
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.36 E-value=4e-08 Score=95.20 Aligned_cols=67 Identities=15% Similarity=0.261 Sum_probs=36.2
Q ss_pred ccCCCCCCCEEEccCC-CCccC----CCccCCCCCCCCEEeccCCCCCCC----CCccccCCCCCcEEEcccccCC
Q 003926 102 TLVKLPDLKVLRLVSL-GLWGP----LSGKISRLSSLEILNMSSNFLNGA----IPQELSILTSLQTLILDENMLA 168 (786)
Q Consensus 102 ~l~~l~~L~~L~L~~n-~l~g~----~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 168 (786)
.+...+.|++|+|++| .+... +...+...++|+.|+|++|.|... +...+...++|++|+|++|.+.
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 3456667777777776 66432 334445556666666666666431 2223334455555555555554
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=98.34 E-value=1.7e-05 Score=86.56 Aligned_cols=245 Identities=12% Similarity=0.088 Sum_probs=167.4
Q ss_pred ccCCC-CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCC---CCCCCCccccCCCCCcEEEcccccCCCCCCcccCC
Q 003926 102 TLVKL-PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNF---LNGAIPQELSILTSLQTLILDENMLAGRVPDWLGS 177 (786)
Q Consensus 102 ~l~~l-~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~---l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 177 (786)
.+.++ ..|+.+.+.. .++.+-..+|.++++|+.+.++.|. ++..-..+|.++.+|+.+.+..+ ++..-...|..
T Consensus 58 aF~~~~~~L~sI~iP~-svt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~ 135 (394)
T 4gt6_A 58 VFCNYKYVLTSVQIPD-TVTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHH 135 (394)
T ss_dssp TTTTCCSCCCEEEECT-TCCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTT
T ss_pred hccCCCCcCEEEEECC-CeeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhh
Confidence 35566 4699999975 4777778899999999999998875 55555678999999999888765 44445568899
Q ss_pred CCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCC--CCCCccccchhhhhcc
Q 003926 178 LPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALG--PQFPKVGKKLVTMILS 255 (786)
Q Consensus 178 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~--~~~p~~~~~L~~L~ls 255 (786)
+.+|+.+.+..+ +.......|.++.+|+.+.+..+--+-....|. ...|+.+.+..+... ........++......
T Consensus 136 c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~~~~I~~~aF~-~~~l~~i~ip~~~~~i~~~af~~c~~l~~~~~~ 213 (394)
T 4gt6_A 136 CEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDSVTAIEERAFT-GTALTQIHIPAKVTRIGTNAFSECFALSTITSD 213 (394)
T ss_dssp CTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTTCCEECTTTTT-TCCCSEEEECTTCCEECTTTTTTCTTCCEEEEC
T ss_pred hcccccccccce-eeeecccceecccccccccccceeeEecccccc-ccceeEEEECCcccccccchhhhccccceeccc
Confidence 999999999765 444556678999999999997663221122354 367888888655321 0000000111111000
Q ss_pred ------------------------------------CCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcE
Q 003926 256 ------------------------------------KNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITY 299 (786)
Q Consensus 256 ------------------------------------~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 299 (786)
.+.++..-...|.++..|+.+.+.++... .-...|.++++|+.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~ 292 (394)
T 4gt6_A 214 SESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQD 292 (394)
T ss_dssp CSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCE
T ss_pred ccccccccceeecccccccccccccccccccceEEcCCcceEcccceeeecccccEEecccccce-ecCccccccccccc
Confidence 01122222345778899999999766543 55678899999999
Q ss_pred EEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCc
Q 003926 300 LNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARN 353 (786)
Q Consensus 300 L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N 353 (786)
+.+. +.++......|..+.+|+.+++..| ++..-...+..+.++..+.+..+
T Consensus 293 i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s 344 (394)
T 4gt6_A 293 IEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS 344 (394)
T ss_dssp EECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT
T ss_pred ccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc
Confidence 9996 5566566677888999999999865 55344556777788998888654
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.23 E-value=9.5e-08 Score=92.56 Aligned_cols=118 Identities=15% Similarity=0.133 Sum_probs=84.0
Q ss_pred CCCccCCCCCCCCEEeccCC-CCCCC----CCccccCCCCCcEEEcccccCCCC----CCcccCCCCCCCEEEccCCcCc
Q 003926 122 PLSGKISRLSSLEILNMSSN-FLNGA----IPQELSILTSLQTLILDENMLAGR----VPDWLGSLPILAVLSLRNNMFN 192 (786)
Q Consensus 122 ~~~~~~~~l~~L~~L~Ls~N-~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 192 (786)
.+...+...++|+.|+|++| .+... +...+...++|++|+|++|.+... +...+...++|++|+|++|.|.
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 34456778899999999999 88642 345567788899999999988632 3345556678889999998887
Q ss_pred cc----CCccccCCCCCCEEEc--cCCcCCcCC-----CCCCCCCcCCEEEcccCCCC
Q 003926 193 GT----LPDSFSYLENLRVLAL--SNNHFYGEV-----PDFSGLTYLQVLDLENNALG 239 (786)
Q Consensus 193 ~~----~p~~~~~l~~L~~L~L--s~N~l~~~~-----p~~~~l~~L~~L~L~~N~l~ 239 (786)
.. +...+...++|+.|+| ++|.+...- ..+...++|+.|+|++|.++
T Consensus 107 ~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 107 GSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 43 3455667778888888 778876421 11445577888888877663
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=98.10 E-value=9e-05 Score=80.16 Aligned_cols=239 Identities=11% Similarity=-0.024 Sum_probs=115.3
Q ss_pred ccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCC
Q 003926 102 TLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPIL 181 (786)
Q Consensus 102 ~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 181 (786)
.+.++.+|+.++|.. .++..-..+|.++ +|+.+.+..+ ++..-...|.++ +|+.+.+..+- ...-...|.+. +|
T Consensus 64 aF~~C~~L~~I~lp~-~v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~~-~L~~i~lp~~~-~~i~~~~F~~~-~l 137 (379)
T 4h09_A 64 NFNSCYNMTKVTVAS-TVTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQGT-DLDDFEFPGAT-TEIGNYIFYNS-SV 137 (379)
T ss_dssp TTTTCTTCCEEEECT-TCCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTTC-CCSEEECCTTC-CEECTTTTTTC-CC
T ss_pred HhhCCCCCCEEEeCC-cceEechhhhcCC-CCceEECCce-eeEeccceeccC-CcccccCCCcc-ccccccccccc-ee
Confidence 456777777777764 3555556667665 5666666543 443334445443 67777776542 21222334333 45
Q ss_pred CEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcC------------------------------------CCCCCCC
Q 003926 182 AVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGE------------------------------------VPDFSGL 225 (786)
Q Consensus 182 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~------------------------------------~p~~~~l 225 (786)
+.+.+..+ ++..-...|.++.+|+.+.+..+..... ...+...
T Consensus 138 ~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~ 216 (379)
T 4h09_A 138 KRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTVKTVTAYGFSYG 216 (379)
T ss_dssp CEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTCCEECTTTTTTC
T ss_pred eeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccccccccccccccccceeEEeecccccc
Confidence 55544433 3333444566667777666654332110 0012333
Q ss_pred CcCCEEEcccCCC--CCCCCccccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEee
Q 003926 226 TYLQVLDLENNAL--GPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIA 303 (786)
Q Consensus 226 ~~L~~L~L~~N~l--~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 303 (786)
.+|+.+.+..+-- ..........|+.+.+..+ ++..-...|.++.+|+.+.+..+ +...-...|.++++|+.+.+.
T Consensus 217 ~~l~~i~~~~~~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~ 294 (379)
T 4h09_A 217 KNLKKITITSGVTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMD 294 (379)
T ss_dssp SSCSEEECCTTCCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEEC
T ss_pred cccceeeeccceeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccccccccc
Confidence 4444444433210 0000011234444444433 33333444555666666666433 333333456666666666666
Q ss_pred cCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEc
Q 003926 304 DNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLY 350 (786)
Q Consensus 304 ~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~ 350 (786)
+|.++..-...|..+.+|+.++|..+ ++..-...+..+.++..+.+
T Consensus 295 ~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~i 340 (379)
T 4h09_A 295 NSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISY 340 (379)
T ss_dssp CTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCC
T ss_pred ccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEE
Confidence 66665544555666666666666543 33222223444444444433
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=97.93 E-value=2.6e-05 Score=81.84 Aligned_cols=137 Identities=15% Similarity=0.066 Sum_probs=86.1
Q ss_pred cCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCC---CcceeeeeeeeccccCCCCceEEEE
Q 003926 482 SAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHR---HLVSALGHCFECYFDDSSVSRIFLI 558 (786)
Q Consensus 482 ~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~---NIv~l~g~~~~~~~~~~~~~~~~LV 558 (786)
.+.++.|....||+. |..+++|+.... .....+.+|+++|+.+++. .+.+.+.++.. ..+..++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~~--~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~------~~g~~~~v 91 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKSQ--QGADELNKEIQLLPLLVGCVKVNIPQYVYIGKR------SDGNPFVG 91 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEEC------TTSCEEEE
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCCc--hHHHHHHHHHHHHHHHHhcCCCCCCCeEeeccc------CCCceEEE
Confidence 356788888899988 566788875321 2245788999999999753 23444444321 13446899
Q ss_pred EecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcC------------------------------------
Q 003926 559 FEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTG------------------------------------ 602 (786)
Q Consensus 559 ~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~------------------------------------ 602 (786)
|||++|.++.+.... .++..++..++.++++.|+.||+.
T Consensus 92 ~e~i~G~~l~~~~~~-----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~ 166 (306)
T 3tdw_A 92 YRKVQGQILGEDGMA-----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDE 166 (306)
T ss_dssp EECCCSEECHHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCH
T ss_pred EeccCCeECchhhhh-----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccch
Confidence 999999888653211 122233333333333333333321
Q ss_pred ---------------------CCCCccccCCCCCceeecC---CCc-ccccCCCcccc
Q 003926 603 ---------------------IVPGVFSNNLKITDILLDQ---NLV-AKISSYNLPLL 635 (786)
Q Consensus 603 ---------------------~~~~ivHrdlk~~NILld~---~~~-~kl~DfGl~~~ 635 (786)
..+.++|+|+++.||+++. ++. ..|.||+.+..
T Consensus 167 ~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 167 SLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred hhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2346799999999999997 344 57999997643
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=97.87 E-value=0.00055 Score=73.90 Aligned_cols=240 Identities=11% Similarity=0.033 Sum_probs=145.9
Q ss_pred cCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCC
Q 003926 103 LVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILA 182 (786)
Q Consensus 103 l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 182 (786)
+....+|+.+.+.. +++.+-..+|.++++|+.++|..+ ++.+-..+|.++ +|+.+.+..+ +...-...|.. .+|+
T Consensus 42 ~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~ 116 (379)
T 4h09_A 42 YKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLD 116 (379)
T ss_dssp GGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCS
T ss_pred cccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCcc
Confidence 44567788888864 577777889999999999999755 666667788887 6888877654 44333445655 4899
Q ss_pred EEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCC---------------------
Q 003926 183 VLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQ--------------------- 241 (786)
Q Consensus 183 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~--------------------- 241 (786)
.+.+..+. ...-...|.+. +|+.+.+..+--.-....|....+|+.+.+..+.....
T Consensus 117 ~i~lp~~~-~~i~~~~F~~~-~l~~~~~~~~v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (379)
T 4h09_A 117 DFEFPGAT-TEIGNYIFYNS-SVKRIVIPKSVTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAK 194 (379)
T ss_dssp EEECCTTC-CEECTTTTTTC-CCCEEEECTTCCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTC
T ss_pred cccCCCcc-ccccccccccc-eeeeeeccceeeccccchhcccccccccccccccceeecccceecccccceeccccccc
Confidence 99998753 33334456554 57777665542222223477778888877765543110
Q ss_pred ------CCcc-----------ccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeec
Q 003926 242 ------FPKV-----------GKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIAD 304 (786)
Q Consensus 242 ------~p~~-----------~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 304 (786)
+|.. ..+|..+.+..+ +...-...|.++..|+.+.+..+ ++..-...|.++.+|+.+.+..
T Consensus 195 ~~~~~~~~~~~~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~ 272 (379)
T 4h09_A 195 TGTEFTIPSTVKTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYA 272 (379)
T ss_dssp CCSEEECCTTCCEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECC
T ss_pred cccccccccceeEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhccccccc
Confidence 0000 012222222221 22223344556667777777654 4444455667777777777754
Q ss_pred CCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCC
Q 003926 305 NKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYAR 352 (786)
Q Consensus 305 N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~ 352 (786)
+ ++......|..+.+|+.+++.++.++..-..++..+.++..+.+..
T Consensus 273 ~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~ 319 (379)
T 4h09_A 273 K-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPT 319 (379)
T ss_dssp C-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCT
T ss_pred c-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCc
Confidence 3 4444445566777777777777777644445566666677666643
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=97.77 E-value=7.2e-05 Score=76.75 Aligned_cols=134 Identities=13% Similarity=0.049 Sum_probs=86.1
Q ss_pred ccCCCCCc-eeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCC-CCCcceeeeeeeeccccCCCCceEEEEEe
Q 003926 484 FMGEGSQG-QMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLR-HRHLVSALGHCFECYFDDSSVSRIFLIFE 560 (786)
Q Consensus 484 ~iG~G~fg-~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~NIv~l~g~~~~~~~~~~~~~~~~LV~E 560 (786)
.+..|..| .||+.... ++..+.+|+-... ....+.+|+..|+.+. +--+-++++++.. .+..++|||
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~-------~~~~~lvme 100 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRT-------PDDAWLLTT 100 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEE-------TTEEEEEEE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEE-------CCeEEEEEE
Confidence 34455555 69998754 4667888875432 2456888999998874 2234556666654 345799999
Q ss_pred cCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhc---------------------------------------
Q 003926 561 YVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHT--------------------------------------- 601 (786)
Q Consensus 561 y~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~--------------------------------------- 601 (786)
|+++.++.+..... ...+..++.++++.|+-||.
T Consensus 101 ~l~G~~~~~~~~~~-------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (272)
T 4gkh_A 101 AIPGKTAFQVLEEY-------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNG 173 (272)
T ss_dssp CCCSEEHHHHHHHC-------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTT
T ss_pred eeCCccccccccCC-------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccc
Confidence 99998876654321 01122233344444444442
Q ss_pred ------------C----CCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 602 ------------G----IVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 602 ------------~----~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
. ..+.++|+|+.+.||+++++..+-|.||+.+.
T Consensus 174 ~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 174 WPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp CCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred hHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 1 11237899999999999988777799998754
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=97.68 E-value=6.1e-05 Score=80.79 Aligned_cols=82 Identities=11% Similarity=0.042 Sum_probs=53.5
Q ss_pred Ccc-CCCCCceeEEEEec-------CCcEEEEEEecccC---CCChHHHHHHHHHHhcCCC---CCcceeeeeeeecccc
Q 003926 483 AFM-GEGSQGQMYRGRLK-------NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRH---RHLVSALGHCFECYFD 548 (786)
Q Consensus 483 ~~i-G~G~fg~Vy~~~~~-------~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H---~NIv~l~g~~~~~~~~ 548 (786)
+.| +.|....+|+.... ++..+++|+..... ......+.+|+.+++.++. -.+.++++++....
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~-- 103 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGD-- 103 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSST--
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCC--
Confidence 567 88888999998764 26678888765432 1122457788888888743 24556666654311
Q ss_pred CCCCceEEEEEecCCCCChh
Q 003926 549 DSSVSRIFLIFEYVPNGTLR 568 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~ 568 (786)
..+..++||||+++..+.
T Consensus 104 --~~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 104 --VLGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp --TTSSCEEEEECCCCBCCC
T ss_pred --ccCCceEEEEecCCCChh
Confidence 113468999999987654
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00046 Score=75.09 Aligned_cols=75 Identities=9% Similarity=0.022 Sum_probs=48.5
Q ss_pred cCccCCCCCceeEEEEec-CCcEEEEEEecccCC-------CChHHHHHHHHHHhcCCC--CCcc-eeeeeeeeccccCC
Q 003926 482 SAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-------HSTRNFMHHIELISKLRH--RHLV-SALGHCFECYFDDS 550 (786)
Q Consensus 482 ~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-------~~~~~f~~E~~~l~~l~H--~NIv-~l~g~~~~~~~~~~ 550 (786)
.+.||.|.++.||+++.. ++..|+||....... .....+..|+++++.+++ +..+ +++.+.
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d-------- 106 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD-------- 106 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--------
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--------
Confidence 467999999999999854 468899998653211 123457789998887743 3444 444321
Q ss_pred CCceEEEEEecCCCC
Q 003926 551 SVSRIFLIFEYVPNG 565 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~G 565 (786)
.+..++||||+++.
T Consensus 107 -~~~~~lvmE~l~g~ 120 (397)
T 2olc_A 107 -TEMAVTVMEDLSHL 120 (397)
T ss_dssp -TTTTEEEECCCTTS
T ss_pred -CCccEEEEEeCCCc
Confidence 12358999999864
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00031 Score=72.74 Aligned_cols=76 Identities=18% Similarity=0.137 Sum_probs=55.3
Q ss_pred ccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCC---CcceeeeeeeeccccCCCCceEEE
Q 003926 481 TSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHR---HLVSALGHCFECYFDDSSVSRIFL 557 (786)
Q Consensus 481 ~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~---NIv~l~g~~~~~~~~~~~~~~~~L 557 (786)
..+.+|.|..+.||+.+..+|+.|.||+...........|.+|++.|+.+.-. -+.+++++. .-++
T Consensus 19 ~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~-----------~~~l 87 (288)
T 3f7w_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD-----------DRTL 87 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE-----------TTEE
T ss_pred EEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc-----------CceE
Confidence 35678999999999999999999999987654434445688999998887432 233333321 1379
Q ss_pred EEecCCCCCh
Q 003926 558 IFEYVPNGTL 567 (786)
Q Consensus 558 V~Ey~~~GsL 567 (786)
||||++.+..
T Consensus 88 v~e~l~~~~~ 97 (288)
T 3f7w_A 88 AMEWVDERPP 97 (288)
T ss_dssp EEECCCCCCC
T ss_pred EEEeecccCC
Confidence 9999987654
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=97.28 E-value=6.2e-05 Score=71.08 Aligned_cols=33 Identities=6% Similarity=0.084 Sum_probs=12.9
Q ss_pred CCEEeccCCCCCCCCCccccCCCCCcEEEcccc
Q 003926 133 LEILNMSSNFLNGAIPQELSILTSLQTLILDEN 165 (786)
Q Consensus 133 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 165 (786)
|+.|||+++.++..--..+..+++|+.|+|++|
T Consensus 63 L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 63 IQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp EEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred EeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 444444444433222222334444444444444
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00075 Score=71.54 Aligned_cols=140 Identities=9% Similarity=0.109 Sum_probs=77.6
Q ss_pred CccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCC-----CCCcceee-e-eeeeccccCCCCceE
Q 003926 483 AFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLR-----HRHLVSAL-G-HCFECYFDDSSVSRI 555 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-----H~NIv~l~-g-~~~~~~~~~~~~~~~ 555 (786)
+.|+.|..+.||+....+| .+++|+.... ......|+.+++.++ .|.++.-. | .+.. ..+..
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~------~~~~~ 106 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSK------HGSFL 106 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEE------ETTEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEE------ECCEE
Confidence 4566678899999987655 4888988642 233445555555443 34433311 1 0000 13457
Q ss_pred EEEEecCCCCChh--------------HHhhc--CCC--C-------CCCCHHHHHH-----------------------
Q 003926 556 FLIFEYVPNGTLR--------------SWISE--GHA--H-------QSLTWTQRIS----------------------- 587 (786)
Q Consensus 556 ~LV~Ey~~~GsL~--------------~~l~~--~~~--~-------~~l~~~~~~~----------------------- 587 (786)
++||||+++..+. ..+|. ... . ..-.|.....
T Consensus 107 ~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 186 (346)
T 2q83_A 107 FVVYDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQ 186 (346)
T ss_dssp EEEEECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHH
T ss_pred EEEEEeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHH
Confidence 8999999986542 11221 000 0 0123432110
Q ss_pred --------HHHHHHHHhhhhhc----------CCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 588 --------AAIGVAKGIQFLHT----------GIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 588 --------ia~~ia~gL~yLH~----------~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
+...+.+++.+|+. ...+.++|+|+.+.||+++.+..+.|.||+.+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a 250 (346)
T 2q83_A 187 LYLQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTV 250 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhc
Confidence 11123345666653 12458999999999999988888999999865
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=97.24 E-value=7.2e-05 Score=70.66 Aligned_cols=83 Identities=12% Similarity=0.051 Sum_probs=52.4
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCC-CCCCCCccccCC----CCCcEEEccccc-CCCCCCcccCCCCC
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNF-LNGAIPQELSIL----TSLQTLILDENM-LAGRVPDWLGSLPI 180 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~~~~p~~~~~l~~ 180 (786)
-+|+.|||+++.++..--..+.++++|+.|+|++|. ++..-=..++.+ ++|+.|+|++|. ++..-=..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 367888888888765544557788889999998885 553322334443 357777777764 54322233455666
Q ss_pred CCEEEccCC
Q 003926 181 LAVLSLRNN 189 (786)
Q Consensus 181 L~~L~Ls~N 189 (786)
|+.|+|+++
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 666666655
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0058 Score=63.75 Aligned_cols=138 Identities=10% Similarity=0.114 Sum_probs=88.5
Q ss_pred cCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCC---CCCcceeeeeeeeccccCCCCceEEEE
Q 003926 482 SAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLR---HRHLVSALGHCFECYFDDSSVSRIFLI 558 (786)
Q Consensus 482 ~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~---H~NIv~l~g~~~~~~~~~~~~~~~~LV 558 (786)
.+.|+.|.+..+|+.... +..+++|+.... ....|.+|++.|+.+. ...+.++++++.. .+..++|
T Consensus 41 ~~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~-------~g~~~lv 109 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLINDE-VQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNS-------QGHSFLL 109 (312)
T ss_dssp EEEECCSSSSEEEEEESS-SCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEEC-------SSEEEEE
T ss_pred eEEeCCccceeeeEEEEC-CCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeec-------CCceEEE
Confidence 467899999999999864 567888876533 2567889999888874 2456777766542 2457999
Q ss_pred EecCCCCChhH-----------HhhcCCCCC-------------------CCCHHHHH-----HHHHHHH----------
Q 003926 559 FEYVPNGTLRS-----------WISEGHAHQ-------------------SLTWTQRI-----SAAIGVA---------- 593 (786)
Q Consensus 559 ~Ey~~~GsL~~-----------~l~~~~~~~-------------------~l~~~~~~-----~ia~~ia---------- 593 (786)
|||+++..+.. .||...... .-+|.... .-..+.+
T Consensus 110 me~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~ 189 (312)
T 3jr1_A 110 LEALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNI 189 (312)
T ss_dssp EECCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCH
T ss_pred EEeccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHH
Confidence 99999886521 223221100 12565322 1111111
Q ss_pred ----H-Hhhhhh-cCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 594 ----K-GIQFLH-TGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 594 ----~-gL~yLH-~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
. -...|. ....|.++|+|+.+.|++++.++ +-|.|+.
T Consensus 190 ~~l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 190 DLIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 1 112332 23457899999999999999887 7788874
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0042 Score=65.17 Aligned_cols=165 Identities=11% Similarity=0.160 Sum_probs=87.6
Q ss_pred ccCHHHHHHHhcCCCc-----cCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCc--cee
Q 003926 466 TFSLEELEEATNNFDT-----SAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHL--VSA 538 (786)
Q Consensus 466 ~~~~~~l~~~~~~f~~-----~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NI--v~l 538 (786)
.++.+++......|.. .+.|+.|....+|+....+| .+++|...... ....+..|+.+++.++...+ .++
T Consensus 6 ~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~ 82 (322)
T 2ppq_A 6 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLP 82 (322)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred cCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCcc
Confidence 3555666666655654 24567788889999987766 57788876521 23455677777776643222 222
Q ss_pred eeeeeeccccCCCCceEEEEEecCCCCChhH--------------HhhcC--C-CCC---C---CCHHHHHHHH------
Q 003926 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRS--------------WISEG--H-AHQ---S---LTWTQRISAA------ 589 (786)
Q Consensus 539 ~g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~--------------~l~~~--~-~~~---~---l~~~~~~~ia------ 589 (786)
+... ++.......+..+++|||+++..+.. .+|.. . ... . ..|.....-.
T Consensus 83 ~~~~-~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 161 (322)
T 2ppq_A 83 LPRK-DGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADE 161 (322)
T ss_dssp CCBT-TCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGG
T ss_pred cCCC-CCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHh
Confidence 2110 00000000245689999999865421 12210 0 000 0 1243321110
Q ss_pred ------HHHHHHhhhhhc----CCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 590 ------IGVAKGIQFLHT----GIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 590 ------~~ia~gL~yLH~----~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
..+.+.+++++. ...+.++|+|+.+.||+++++..+.|.||+.+.
T Consensus 162 ~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 162 VEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp TSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 113334444442 223478999999999999987666899998753
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.49 E-value=0.0077 Score=65.87 Aligned_cols=76 Identities=9% Similarity=0.070 Sum_probs=44.4
Q ss_pred CCccccCCCCCceeecCCCcccccCCCcccccccccccccccc--cccccCccccccC---CCCcccceeehhHHHHHHH
Q 003926 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIP--YSGSIDPTNSARG---KLEEKIDIYDFGLILLEII 679 (786)
Q Consensus 605 ~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~~~~~~~~--~~~~~aPe~~~~~---~~t~ksDVwSfGvvl~Ell 679 (786)
+.++|+|+++.||+++.+. +++.||+.+.............. ...|.+|+..... .-....++.+....+|+.+
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 310 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNLF 310 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHHH
Confidence 5899999999999999876 89999998765432221111110 0122333322110 1112344557777888877
Q ss_pred hC
Q 003926 680 VG 681 (786)
Q Consensus 680 tG 681 (786)
++
T Consensus 311 ~~ 312 (420)
T 2pyw_A 311 NK 312 (420)
T ss_dssp HH
T ss_pred HH
Confidence 65
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=96.46 E-value=0.00061 Score=65.52 Aligned_cols=66 Identities=15% Similarity=0.211 Sum_probs=32.6
Q ss_pred cCCCCCCCEEEccCC-CCccC----CCccCCCCCCCCEEeccCCCCCCC----CCccccCCCCCcEEEcccccCC
Q 003926 103 LVKLPDLKVLRLVSL-GLWGP----LSGKISRLSSLEILNMSSNFLNGA----IPQELSILTSLQTLILDENMLA 168 (786)
Q Consensus 103 l~~l~~L~~L~L~~n-~l~g~----~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 168 (786)
+.+-+.|+.|+|++| ++... +...+..-+.|+.|+|++|.|... +...+..-+.|+.|+|+.|.|.
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 344566666777664 54321 233444455666666666665421 2222333344555555555543
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=96.30 E-value=0.036 Score=58.01 Aligned_cols=81 Identities=6% Similarity=0.119 Sum_probs=50.0
Q ss_pred CccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCC--cceeeeeeeeccccCCCCceEEEEEe
Q 003926 483 AFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRH--LVSALGHCFECYFDDSSVSRIFLIFE 560 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~N--Iv~l~g~~~~~~~~~~~~~~~~LV~E 560 (786)
..++ |....||+....+|+.+++|...... .....+..|..+++.++... +.+++.. .+.......+..++|||
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~--~g~~~~~~~g~~~~l~~ 107 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAF--NGQTLLNHQGFYFAVFP 107 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCB--TTBSCEEETTEEEEEEE
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeec--CCcEEEEECCEEEEEEE
Confidence 3466 88889999887778789999886332 23556777888887774322 3344432 11000001245688999
Q ss_pred cCCCCCh
Q 003926 561 YVPNGTL 567 (786)
Q Consensus 561 y~~~GsL 567 (786)
|+++..+
T Consensus 108 ~i~G~~~ 114 (328)
T 1zyl_A 108 SVGGRQF 114 (328)
T ss_dssp CCCCEEC
T ss_pred ecCCCCC
Confidence 9987543
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=96.26 E-value=0.00075 Score=64.90 Aligned_cols=114 Identities=11% Similarity=0.131 Sum_probs=70.8
Q ss_pred ccCCCCCCCCEEeccCC-CCCC----CCCccccCCCCCcEEEcccccCCC----CCCcccCCCCCCCEEEccCCcCccc-
Q 003926 125 GKISRLSSLEILNMSSN-FLNG----AIPQELSILTSLQTLILDENMLAG----RVPDWLGSLPILAVLSLRNNMFNGT- 194 (786)
Q Consensus 125 ~~~~~l~~L~~L~Ls~N-~l~~----~~p~~~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~- 194 (786)
..+.+-+.|+.|+|++| .|.. .+...+..-+.|+.|+|++|++.. .+.+.+..-+.|+.|+|++|.|...
T Consensus 35 ~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~G 114 (197)
T 1pgv_A 35 RLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPEL 114 (197)
T ss_dssp HHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHH
T ss_pred HHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHH
Confidence 34556678999999985 7652 234556667888888888888862 2334455567788888888887632
Q ss_pred ---CCccccCCCCCCEEEccCCc---CCcC----CC-CCCCCCcCCEEEcccCCC
Q 003926 195 ---LPDSFSYLENLRVLALSNNH---FYGE----VP-DFSGLTYLQVLDLENNAL 238 (786)
Q Consensus 195 ---~p~~~~~l~~L~~L~Ls~N~---l~~~----~p-~~~~l~~L~~L~L~~N~l 238 (786)
+-..+..-+.|+.|+|++|. +... +- .+..-+.|+.|+++.|.+
T Consensus 115 a~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 115 LARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 22334444568888887652 2211 00 133446677777766543
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=96.25 E-value=0.0071 Score=54.13 Aligned_cols=35 Identities=26% Similarity=0.304 Sum_probs=14.0
Q ss_pred CCEEEccCCcCcccCCccccCCCCCCEEEccCCcC
Q 003926 181 LAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHF 215 (786)
Q Consensus 181 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 215 (786)
|+.|+|++|+|+...+..|..+++|+.|+|++|.+
T Consensus 33 l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 33 TTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp CSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 33344444444333333334444444444444433
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=96.15 E-value=0.0045 Score=55.46 Aligned_cols=37 Identities=22% Similarity=0.296 Sum_probs=23.3
Q ss_pred ccceeeccCccccCCCchhhCCCCCCcEEEeecCCCC
Q 003926 272 QLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLT 308 (786)
Q Consensus 272 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 308 (786)
+|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4566666666666555555666666666666666553
|
| >1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 | Back alignment and structure |
|---|
Probab=95.89 E-value=0.011 Score=64.64 Aligned_cols=72 Identities=19% Similarity=0.262 Sum_probs=48.6
Q ss_pred CccCCCCCceeEEEEecC--------CcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCc-ceeeeeeeeccccCCCCc
Q 003926 483 AFMGEGSQGQMYRGRLKN--------GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHL-VSALGHCFECYFDDSSVS 553 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~~--------g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NI-v~l~g~~~~~~~~~~~~~ 553 (786)
+.|+.|-...||+....+ +..+.+|+.... .....+.+|..+++.+...++ .++++.+. +
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~---------~ 147 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFS---------G 147 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEET---------T
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeC---------C
Confidence 567888889999998753 478888887432 122567789999888854444 45555431 1
Q ss_pred eEEEEEecCCCCCh
Q 003926 554 RIFLIFEYVPNGTL 567 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL 567 (786)
.+||||+++.++
T Consensus 148 --g~v~e~l~G~~l 159 (429)
T 1nw1_A 148 --GRLEEYIPSRPL 159 (429)
T ss_dssp --EEEECCCCEEEC
T ss_pred --CEEEEEeCCccc
Confidence 389999986443
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=95.67 E-value=0.018 Score=59.71 Aligned_cols=71 Identities=10% Similarity=-0.011 Sum_probs=41.9
Q ss_pred cCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcc-eeeeeeeeccccCCCCceEEEEEe
Q 003926 482 SAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLV-SALGHCFECYFDDSSVSRIFLIFE 560 (786)
Q Consensus 482 ~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv-~l~g~~~~~~~~~~~~~~~~LV~E 560 (786)
.+.|+.|....+|+. ..+++|+....... .....+|+.+++.+....+. ++++++. +.-++|+|
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~~---------~~~~~v~e 87 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVDP---------ATGVMVTR 87 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEECT---------TTCCEEEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEEC---------CCCEEEEe
Confidence 577888999999999 45778876543211 11234677777766433333 4444321 12378999
Q ss_pred cC-CCCCh
Q 003926 561 YV-PNGTL 567 (786)
Q Consensus 561 y~-~~GsL 567 (786)
|+ ++.++
T Consensus 88 ~i~~g~~l 95 (301)
T 3dxq_A 88 YIAGAQTM 95 (301)
T ss_dssp CCTTCEEC
T ss_pred ecCCCccC
Confidence 99 55444
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=95.50 E-value=0.075 Score=55.74 Aligned_cols=33 Identities=6% Similarity=0.031 Sum_probs=27.1
Q ss_pred CCCccccCCCCCceeecCC----CcccccCCCccccc
Q 003926 604 VPGVFSNNLKITDILLDQN----LVAKISSYNLPLLA 636 (786)
Q Consensus 604 ~~~ivHrdlk~~NILld~~----~~~kl~DfGl~~~~ 636 (786)
.+.++|+|+.+.||+++.+ ..+.|.||+.+...
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 3579999999999999874 67889999986543
|
| >2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} | Back alignment and structure |
|---|
Probab=95.05 E-value=0.057 Score=59.41 Aligned_cols=74 Identities=12% Similarity=0.017 Sum_probs=46.1
Q ss_pred cCccCCCCCceeEEEEecC-CcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcc-eeeeeeeeccccCCCCceEEEEE
Q 003926 482 SAFMGEGSQGQMYRGRLKN-GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLV-SALGHCFECYFDDSSVSRIFLIF 559 (786)
Q Consensus 482 ~~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv-~l~g~~~~~~~~~~~~~~~~LV~ 559 (786)
.+.|+.|-...+|+....+ +..+++|+....... .-.-.+|..+++.+...+++ ++++++. + .+||
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~---------~--G~v~ 180 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFFT---------N--GRIE 180 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEET---------T--EEEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEeC---------C--eEEE
Confidence 3567888889999998765 477888876432211 11125788888888655554 5555431 1 2599
Q ss_pred ecCCCCCh
Q 003926 560 EYVPNGTL 567 (786)
Q Consensus 560 Ey~~~GsL 567 (786)
||+++.+|
T Consensus 181 e~I~G~~l 188 (458)
T 2qg7_A 181 EFMDGYAL 188 (458)
T ss_dssp ECCCSEEC
T ss_pred EeeCCccC
Confidence 99987544
|
| >2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.85 E-value=0.034 Score=38.42 Aligned_cols=33 Identities=24% Similarity=0.347 Sum_probs=19.8
Q ss_pred chhhhhhHhhhHHHHHHHHHHHHHHHhhhcccc
Q 003926 388 SKAVLALSIIGGIIGGISLVVIAFLLVRRTKSK 420 (786)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (786)
....++.++++++++++++++..++++|||+.+
T Consensus 8 ~~~aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 8 RTPLIAAGVIGGLFILVIVGLTFAVYVRRKSIK 40 (44)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred CcceEEEeehHHHHHHHHHHHHHHHHhhhhhhh
Confidence 344566777777766665555556666655443
|
| >2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.60 E-value=0.03 Score=38.81 Aligned_cols=32 Identities=16% Similarity=0.228 Sum_probs=19.5
Q ss_pred chhhhhhHhhhHHHHHHHHHHHHHHHhhhccc
Q 003926 388 SKAVLALSIIGGIIGGISLVVIAFLLVRRTKS 419 (786)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (786)
....+++++++++++++++++..++++||++.
T Consensus 9 ~~~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 9 KIPSIATGMVGALLLLLVVALGIGLFMRRRHI 40 (44)
T ss_dssp CSSSSTHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred CcceEEeehhHHHHHHHHHHHHHHHHhhhhHh
Confidence 34456677777776666555555666665543
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=94.47 E-value=0.1 Score=55.88 Aligned_cols=140 Identities=12% Similarity=0.097 Sum_probs=78.0
Q ss_pred CccCCCCCceeEEEEec--------CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCc-ceeeeeeeeccccCCCCc
Q 003926 483 AFMGEGSQGQMYRGRLK--------NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHL-VSALGHCFECYFDDSSVS 553 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NI-v~l~g~~~~~~~~~~~~~ 553 (786)
+.+..|-...+|+.... ++..+.+|+... .........+|.++++.+.-..+ .++++++. +
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~-~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~---------~ 125 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA-ILQGVDSLVLESVMFAILAERSLGPQLYGVFP---------E 125 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEET---------T
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCC-ccchHHHHHHHHHHHHHHHhcCCCCeEEEEcC---------C
Confidence 45667888889999874 246888887532 22345667789999988753333 44554432 1
Q ss_pred eEEEEEecCCCCChhH-----------------HhhcCCC--CCCCC--HHHHHHHHHHHHH------------------
Q 003926 554 RIFLIFEYVPNGTLRS-----------------WISEGHA--HQSLT--WTQRISAAIGVAK------------------ 594 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~-----------------~l~~~~~--~~~l~--~~~~~~ia~~ia~------------------ 594 (786)
.+||||+++..|.. .||.... ..... |.+..+...++..
T Consensus 126 --g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~ 203 (379)
T 3feg_A 126 --GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLK 203 (379)
T ss_dssp --EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHH
T ss_pred --ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHH
Confidence 28999999765531 1122111 11122 3333333322211
Q ss_pred -Hhhhhh----c-CCCCCccccCCCCCceeecCC----CcccccCCCccc
Q 003926 595 -GIQFLH----T-GIVPGVFSNNLKITDILLDQN----LVAKISSYNLPL 634 (786)
Q Consensus 595 -gL~yLH----~-~~~~~ivHrdlk~~NILld~~----~~~kl~DfGl~~ 634 (786)
.+..|. . .....++|+|+.+.||+++.+ ..+.+.||..+.
T Consensus 204 ~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 204 DEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 122222 1 123468999999999999876 678899998754
|
| >3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A* | Back alignment and structure |
|---|
Probab=94.42 E-value=0.039 Score=58.93 Aligned_cols=73 Identities=18% Similarity=0.115 Sum_probs=42.3
Q ss_pred CccCCCCCceeEEEEecC---------CcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcc-eeeeeeeeccccCCCC
Q 003926 483 AFMGEGSQGQMYRGRLKN---------GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLV-SALGHCFECYFDDSSV 552 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~~---------g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv-~l~g~~~~~~~~~~~~ 552 (786)
..++.|....+|+....+ +..+++|+...... ...+...|.++++.+...+++ ++++.. .
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~---------~ 108 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTF---------N 108 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEE---------T
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEec---------C
Confidence 467788888999998654 26788887653221 111235788888877533443 555422 1
Q ss_pred ceEEEEEecCCCCCh
Q 003926 553 SRIFLIFEYVPNGTL 567 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL 567 (786)
-++||||+++..+
T Consensus 109 --~~~v~e~i~G~~l 121 (369)
T 3c5i_A 109 --GGRIEEWLYGDPL 121 (369)
T ss_dssp --TEEEEECCCSEEC
T ss_pred --CcEEEEEecCCcC
Confidence 2689999987543
|
| >3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* | Back alignment and structure |
|---|
Probab=93.93 E-value=0.093 Score=55.32 Aligned_cols=32 Identities=16% Similarity=0.294 Sum_probs=27.3
Q ss_pred CCccccCCCCCceeecCCCcccccCCCccccc
Q 003926 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636 (786)
Q Consensus 605 ~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~ 636 (786)
..++|+|+.+.||++++++.+.+.||+.+...
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 47899999999999998888899999876443
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=90.76 E-value=0.47 Score=45.85 Aligned_cols=98 Identities=9% Similarity=0.008 Sum_probs=61.5
Q ss_pred CChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhh-hcCCCCCccccCCCCCceeecCCCcccccCCCcccccccccccc
Q 003926 565 GTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFL-HTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVG 643 (786)
Q Consensus 565 GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yL-H~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~~~~ 643 (786)
-||.++|... ..+++..+.+.++.|.+++|.-+ +... + ..+=+-+..|++..+|.+...+ +.+.
T Consensus 33 vSL~eIL~~~--~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~--~~~i~~~~~i~l~~dG~V~f~~-~~s~--------- 97 (229)
T 2yle_A 33 LSLEEILRLY--NQPINEEQAWAVCYQCCGSLRAAARRRQ-P--RHRVRSAAQIRVWRDGAVTLAP-AADD--------- 97 (229)
T ss_dssp EEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHTTC-C--CCCCCSGGGEEEETTSCEEECC-C------------
T ss_pred ccHHHHHHHc--CCCcCHHHHHHHHHHHHHHHHhhhhccc-C--CceecCCcceEEecCCceeccc-cccc---------
Confidence 3788888753 35799999999999999998765 2110 1 1223446788898888876653 1110
Q ss_pred cccccccccCccccccCCCCcccceeehhHHHHHHHh
Q 003926 644 HVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV 680 (786)
Q Consensus 644 ~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt 680 (786)
.....+.+||... ...+.+.=|||+|+++|.-+-
T Consensus 98 --~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALD 131 (229)
T 2yle_A 98 --AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALD 131 (229)
T ss_dssp -----------CCSS-SSSCHHHHHHHHHHHHHHHHT
T ss_pred --ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhh
Confidence 0112344677543 245678889999999999875
|
| >2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A | Back alignment and structure |
|---|
Probab=90.63 E-value=0.35 Score=33.35 Aligned_cols=27 Identities=22% Similarity=0.400 Sum_probs=11.1
Q ss_pred hhhhHhhhHHHHHHHHHHHHHHHhhhcc
Q 003926 391 VLALSIIGGIIGGISLVVIAFLLVRRTK 418 (786)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (786)
.++.++++ ++.++++.++.++++|||+
T Consensus 13 ~Ia~~vVG-vll~vi~~l~~~~~~RRR~ 39 (44)
T 2jwa_A 13 SIISAVVG-ILLVVVLGVVFGILIKRRQ 39 (44)
T ss_dssp HHHHHHHH-HHHHHHHHHHHHHHHHHHC
T ss_pred chHHHHHH-HHHHHHHHHHHHhheehhh
Confidence 34444444 3333333333344444443
|
| >3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=88.41 E-value=0.56 Score=50.81 Aligned_cols=73 Identities=11% Similarity=0.065 Sum_probs=45.6
Q ss_pred CccCCCCCceeEEEEecC--------CcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCc-ceeeeeeeeccccCCCCc
Q 003926 483 AFMGEGSQGQMYRGRLKN--------GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHL-VSALGHCFECYFDDSSVS 553 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~~--------g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NI-v~l~g~~~~~~~~~~~~~ 553 (786)
+.+..|-...+|+....+ +..+++|+..... ...-+-.+|.++++.+.-.++ .++++.+.
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~~---------- 144 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADFP---------- 144 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET----------
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEcC----------
Confidence 557778888999998763 5778888764322 111123578888877753333 34443221
Q ss_pred eEEEEEecCCCCCh
Q 003926 554 RIFLIFEYVPNGTL 567 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL 567 (786)
-++||||+++..|
T Consensus 145 -~~~I~efI~G~~l 157 (424)
T 3mes_A 145 -EGRIEEFIDGEPL 157 (424)
T ss_dssp -TEEEEECCCSEEC
T ss_pred -CCEEEEEeCCccC
Confidence 2789999998654
|
| >3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A | Back alignment and structure |
|---|
Probab=87.83 E-value=0.077 Score=58.51 Aligned_cols=60 Identities=7% Similarity=-0.043 Sum_probs=18.2
Q ss_pred cCccCCCCCceeEEEEecC-CcEEEE------EEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeee
Q 003926 482 SAFMGEGSQGQMYRGRLKN-GTFVAI------RCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFE 544 (786)
Q Consensus 482 ~~~iG~G~fg~Vy~~~~~~-g~~vAv------K~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~ 544 (786)
.+.+| ||.||+|.+.. ...||| |..+.... .....|.+|..+++..+|||+++.+++...
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 45566 99999999764 468898 76654322 223579999999999999999999988654
|
| >2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A | Back alignment and structure |
|---|
Probab=83.70 E-value=1.4 Score=29.48 Aligned_cols=26 Identities=27% Similarity=0.337 Sum_probs=11.1
Q ss_pred hhhhHhhhHHHHHHH-HHHHHHHHhhh
Q 003926 391 VLALSIIGGIIGGIS-LVVIAFLLVRR 416 (786)
Q Consensus 391 ~~~~~~~~~~~~~~~-~~~~~~~~~~~ 416 (786)
..+.+++.+.++++. +++++++++||
T Consensus 11 GaIAGiVvG~v~gv~li~~l~~~~~rr 37 (38)
T 2k1k_A 11 GEIVAVIFGLLLGAALLLGILVFRSRR 37 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CceeeeehHHHHHHHHHHHHHHHHeec
Confidence 334444444444433 33444444443
|
| >1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1 | Back alignment and structure |
|---|
Probab=80.66 E-value=0.54 Score=30.57 Aligned_cols=26 Identities=23% Similarity=0.493 Sum_probs=10.7
Q ss_pred hhhhHhhhHHHHHHHHHHHHHHHhhhc
Q 003926 391 VLALSIIGGIIGGISLVVIAFLLVRRT 417 (786)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (786)
.++.++++ ++.++++...+.+++|||
T Consensus 9 sIaagVvg-lll~vii~l~~~~~iRRr 34 (35)
T 1iij_A 9 FIIATVVG-VLLFLILVVVVGILIKRR 34 (35)
T ss_dssp HHHHHHHH-HHHHHHHTTTTTHHHHHC
T ss_pred EeHHHHHH-HHHHHHHHHHhheEEeec
Confidence 34444454 333333333334445554
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 786 | ||||
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 1e-37 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 2e-37 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 3e-36 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 9e-36 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 1e-35 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 3e-35 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 1e-34 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 5e-34 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 6e-34 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 2e-33 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 5e-33 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 1e-32 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 1e-32 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 3e-32 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 8e-32 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 9e-32 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 1e-31 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 2e-31 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 7e-31 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 1e-30 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 2e-30 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 2e-30 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 3e-30 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 5e-30 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 9e-30 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 2e-29 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 3e-29 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 6e-29 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 7e-29 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 8e-29 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 1e-28 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 2e-28 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 2e-28 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 2e-27 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 3e-27 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 2e-26 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 2e-26 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 1e-25 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 2e-25 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 3e-25 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 4e-25 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 5e-25 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 6e-25 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 1e-24 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 8e-24 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 8e-24 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 1e-23 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 5e-23 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 1e-22 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 5e-22 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 1e-21 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 3e-21 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 1e-20 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 1e-19 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 1e-19 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 2e-19 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 6e-19 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 1e-14 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 2e-13 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 3e-12 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 2e-05 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 8e-19 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 2e-18 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 2e-18 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 1e-16 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 1e-16 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 4e-16 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 1e-15 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 3e-12 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 7e-11 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 1e-04 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 2e-15 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 3e-10 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 4e-08 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 1e-05 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 5e-09 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 6e-09 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 1e-08 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 2e-05 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 0.004 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 1e-08 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 7e-07 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 4e-06 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 4e-05 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 6e-04 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 0.004 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 2e-06 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 0.003 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 2e-06 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 6e-05 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 0.001 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 0.002 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 3e-06 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 1e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 8e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 9e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 1e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 4e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 6e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 7e-04 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 4e-05 | |
| d1w8aa_ | 192 | c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanoga | 2e-04 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 2e-04 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 6e-04 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 0.003 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 5e-04 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 0.003 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 0.003 |
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 140 bits (353), Expect = 1e-37
Identities = 56/298 (18%), Positives = 114/298 (38%), Gaps = 35/298 (11%)
Query: 470 EELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKC--HSTRNFMHHIELI 527
++ E +G GS G +Y+G+ VA++ L + + F + + ++
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVL 58
Query: 528 SKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRIS 587
K RH +++ +G+ + ++ ++ +L + + I
Sbjct: 59 RKTRHVNILLFMGYSTAPQ--------LAIVTQWCEGSSLYHHLHI--IETKFEMIKLID 108
Query: 588 AAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIP 647
A A+G+ +LH + +LK +I L ++L KI + L +
Sbjct: 109 IARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 165
Query: 648 YSGSIDP------TNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAV 700
SGSI + + D+Y FG++L E++ G+ P + D + +
Sbjct: 166 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG-- 223
Query: 701 VTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758
R + P ++K + K M + CL K ERP +L +++ A+
Sbjct: 224 --------RGYLSPDLSKVRSNCP-KAMKRLMAECLKKKRDERPLFPQILASIELLAR 272
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 139 bits (352), Expect = 2e-37
Identities = 60/312 (19%), Positives = 116/312 (37%), Gaps = 52/312 (16%)
Query: 466 TFSLEELEEATNNFDTSAFM---------GEGSQGQMYRGRLK----NGTFVAIRCLKMK 512
F+ E+ EA F + G G G++ G LK FVAI+ LK
Sbjct: 6 PFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSG 65
Query: 513 KCHST-RNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI 571
R+F+ ++ + H +++ E S+ + +I E++ NG+L S++
Sbjct: 66 YTEKQRRDFLSEASIMGQFDHPNVIH-----LEGVVTKST--PVMIITEFMENGSLDSFL 118
Query: 572 SEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631
+ T Q + G+A G+++L +L +IL++ NLV K+S +
Sbjct: 119 RQNDGQF--TVIQLVGMLRGIAAGMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFG 173
Query: 632 LPLLAENAEK-------VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVG--R 682
L E+ +G IP P K D++ +G+++ E++ R
Sbjct: 174 LSRFLEDDTSDPTYTSALGGKIPI-RWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGER 232
Query: 683 PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAE 742
P D++ ++ + + ++ + C K+
Sbjct: 233 PYWDMTNQDVIN----------------AIEQDYRLPPPMDCPSALHQLMLDCWQKDRNH 276
Query: 743 RPSVEDVLWNLQ 754
RP ++ L
Sbjct: 277 RPKFGQIVNTLD 288
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 135 bits (342), Expect = 3e-36
Identities = 61/273 (22%), Positives = 111/273 (40%), Gaps = 33/273 (12%)
Query: 486 GEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFEC 545
G G G+++ G T VA++ LK + S F+ L+ +L+H+ LV +
Sbjct: 22 GAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ- 79
Query: 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVP 605
I++I EY+ NG+L ++ + + LT + + A +A+G+ F+
Sbjct: 80 -------EPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEE---R 128
Query: 606 GVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE--KVGHVIPYSGSIDPTNSARGKLE 663
+L+ +IL+ L KI+ + L L E+ E P G
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 188
Query: 664 EKIDIYDFGLILLEIIVGR--PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACL 721
K D++ FG++L EI+ P ++++N + MV P
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG---------YRMVRP----DNC 235
Query: 722 DESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754
E L +M C + P +RP+ + + L+
Sbjct: 236 PEELYQLMR---LCWKERPEDRPTFDYLRSVLE 265
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 133 bits (337), Expect = 9e-36
Identities = 55/270 (20%), Positives = 108/270 (40%), Gaps = 31/270 (11%)
Query: 486 GEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFEC 545
G+G G + G + G VA++C+K + + F+ ++++LRH +LV LG E
Sbjct: 16 GKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVE- 71
Query: 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVP 605
++++ EY+ G+L ++ L + ++ V + +++L
Sbjct: 72 -----EKGGLYIVTEYMAKGSLVDYLRS-RGRSVLGGDCLLKFSLDVCEAMEYLEG---N 122
Query: 606 GVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEK 665
+L ++L+ ++ VAK+S + L A + + G + + P K K
Sbjct: 123 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTA--PEALREKKFSTK 180
Query: 666 IDIYDFGLILLEII-VGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDES 724
D++ FG++L EI GR R + + ++ C
Sbjct: 181 SDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV-----------EKGYKMDAPDGCPPA- 228
Query: 725 LKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754
+ EV C + A RPS + L+
Sbjct: 229 ---VYEVMKNCWHLDAAMRPSFLQLREQLE 255
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 134 bits (337), Expect = 1e-35
Identities = 65/295 (22%), Positives = 120/295 (40%), Gaps = 29/295 (9%)
Query: 462 PAYRTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFM 521
P + + + E + +G+G G+++ G T VAI+ LK S F+
Sbjct: 2 PQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFL 60
Query: 522 HHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLT 581
+++ KLRH LV S I+++ EY+ G+L ++ +G + L
Sbjct: 61 QEAQVMKKLRHEKLVQLYAVV--------SEEPIYIVTEYMSKGSLLDFL-KGETGKYLR 111
Query: 582 WTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE- 640
Q + A +A G+ ++ +L+ +IL+ +NLV K++ + L L E+ E
Sbjct: 112 LPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 168
Query: 641 -KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQA 699
P + G+ K D++ FG++L E+ + V+ +
Sbjct: 169 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN------RE 222
Query: 700 VVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754
V+ E R P ++ D + +C K P ERP+ E + L+
Sbjct: 223 VLDQVERGYRMPCPPECPESLHD--------LMCQCWRKEPEERPTFEYLQAFLE 269
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 134 bits (337), Expect = 3e-35
Identities = 60/291 (20%), Positives = 117/291 (40%), Gaps = 31/291 (10%)
Query: 486 GEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFEC 545
G+G G+++RG+ + G VA++ ++ S I LRH +++ + +
Sbjct: 12 GKGRFGEVWRGKWR-GEEVAVKIFSSREERSWF-REAEIYQTVMLRHENILGFIAADNK- 68
Query: 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV- 604
D+ + ++++L+ +Y +G+L +++ ++T I A+ A G+ LH IV
Sbjct: 69 --DNGTWTQLWLVSDYHEHGSLFDYLN----RYTVTVEGMIKLALSTASGLAHLHMEIVG 122
Query: 605 ----PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE-----KVGHVIPYSGSIDP- 654
P + +LK +IL+ +N I+ L + ++A H + + P
Sbjct: 123 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 182
Query: 655 -----TNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709
N + ++ DIY GL+ EI + E L R
Sbjct: 183 VLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMR 242
Query: 710 SMV-----DPAV-NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754
+V P + N+ E+L+ M ++ C N A R + + L
Sbjct: 243 KVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 293
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 130 bits (329), Expect = 1e-34
Identities = 55/283 (19%), Positives = 105/283 (37%), Gaps = 35/283 (12%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLV 536
+ +G G G + G+ + VAI+ +K + S F+ +++ L H LV
Sbjct: 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLV 62
Query: 537 SALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGI 596
G C + IF+I EY+ NG L +++ Q + V + +
Sbjct: 63 QLYGVCTKQ-------RPIFIITEYMANGCLLNYLR--EMRHRFQTQQLLEMCKDVCEAM 113
Query: 597 QFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSID 653
++L + +L + L++ V K+S + L + E VG P
Sbjct: 114 EYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSP 169
Query: 654 PTNSARGKLEEKIDIYDFGLILLEIIVG--RPLKSRKEVDLLKNQLQAVVTADESARRSM 711
P K K DI+ FG+++ EI P + + ++ Q + +
Sbjct: 170 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR---------L 220
Query: 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754
P + + + + C + ERP+ + +L N+
Sbjct: 221 YRP-------HLASEKVYTIMYSCWHEKADERPTFKILLSNIL 256
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 129 bits (326), Expect = 5e-34
Identities = 52/293 (17%), Positives = 109/293 (37%), Gaps = 29/293 (9%)
Query: 465 RTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKN-GTFVAIRCLKMKKCHSTRNFMHH 523
+ + ++ E + +G G G++Y G K VA++ LK F+
Sbjct: 5 SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKE 63
Query: 524 IELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWT 583
++ +++H +LV LG C ++I E++ G L ++ E + Q ++
Sbjct: 64 AAVMKEIKHPNLVQLLGVCTRE-------PPFYIITEFMTYGNLLDYLRECN-RQEVSAV 115
Query: 584 QRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVG 643
+ A ++ +++L +L + L+ +N + K++ + L L
Sbjct: 116 VLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 172
Query: 644 H--VIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVV 701
H P + A K K D++ FG++L EI
Sbjct: 173 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI------------ 220
Query: 702 TADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754
D S +++ + + + E+ C NP++RPS ++ +
Sbjct: 221 --DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 271
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 129 bits (324), Expect = 6e-34
Identities = 50/282 (17%), Positives = 108/282 (38%), Gaps = 33/282 (11%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLV 536
+ +G G G ++ G N VAI+ ++ + S +F+ E++ KL H LV
Sbjct: 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLV 63
Query: 537 SALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGI 596
G C E + I L+FE++ +G L ++ + + + V +G
Sbjct: 64 QLYGVCLEQ-------APICLVFEFMEHGCLSDYLRTQRGLFA--AETLLGMCLDVCEG- 113
Query: 597 QFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP-LLAENAEKVGHVIPYS-GSIDP 654
+ V +L + L+ +N V K+S + + + ++ + P
Sbjct: 114 --MAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASP 171
Query: 655 TNSARGKLEEKIDIYDFGLILLEIIVGR--PLKSRKEVDLLKNQLQAVVTADESARRSMV 712
+ + K D++ FG+++ E+ P ++R +++++ +
Sbjct: 172 EVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFR---------LY 222
Query: 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754
P + + +M C + P +RP+ +L L
Sbjct: 223 KPRL----ASTHVYQIMN---HCWKERPEDRPAFSRLLRQLA 257
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 127 bits (320), Expect = 2e-33
Identities = 50/281 (17%), Positives = 104/281 (37%), Gaps = 29/281 (10%)
Query: 478 NFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHST--RNFMHHIELISKLRHRH 534
+++ +G GS G+ + R K +G + + L + + + L+ +L+H +
Sbjct: 5 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 64
Query: 535 LVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEG-HAHQSLTWTQRISAAIGVA 593
+V + D + + ++++ EY G L S I++G Q L + +
Sbjct: 65 IV-----RYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLT 119
Query: 594 KGIQFLH--TGIVPGVFSNNLKITDILLDQNLVAKISSYNL-PLLAENAEKVGHVIPYSG 650
++ H + V +LK ++ LD K+ + L +L + +
Sbjct: 120 LALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPY 179
Query: 651 SIDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTADESARR 709
+ P R EK DI+ G +L E+ P + + +L + +
Sbjct: 180 YMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE--------GKF 231
Query: 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
+ + + + R L RPSVE++L
Sbjct: 232 RRIPYRYSDELNE--------IITRMLNLKDYHRPSVEEIL 264
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 127 bits (319), Expect = 5e-33
Identities = 41/273 (15%), Positives = 108/273 (39%), Gaps = 34/273 (12%)
Query: 486 GEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
G+G+ G++Y+ + K A + + K ++M I++++ H ++V +
Sbjct: 21 GDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIV----KLLD 76
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
++ + + ++++ E+ G + + + E + LT +Q + +LH
Sbjct: 77 AFYYE---NNLWILIEFCAGGAVDAVMLE--LERPLTESQIQVVCKQTLDALNYLHD--- 128
Query: 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEK-----VGHVIPYSGSIDPTNSAR 659
+ +LK +IL + K++ + + + +G + + +++
Sbjct: 129 NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSK 188
Query: 660 GK-LEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVN 717
+ + K D++ G+ L+E+ P + +L + S ++ P
Sbjct: 189 DRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAK-------SEPPTLAQP--- 238
Query: 718 KACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
+ + K ++ +CL KN R + +L
Sbjct: 239 -SRWSSNFKDFLK---KCLEKNVDARWTTSQLL 267
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 126 bits (318), Expect = 1e-32
Identities = 51/270 (18%), Positives = 102/270 (37%), Gaps = 33/270 (12%)
Query: 486 GEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHST---RNFMHHIELISKLRHRHLVSALGH 541
G GS G +Y R ++N VAI+ + S ++ + + + KLRH + +
Sbjct: 24 GHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTI----Q 79
Query: 542 CFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHT 601
CY + +L+ EY + L + + G +G+ +LH+
Sbjct: 80 YRGCYLRE---HTAWLVMEYCLGSASDLLE---VHKKPLQEVEIAAVTHGALQGLAYLHS 133
Query: 602 GIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGK 661
+ ++K +ILL + + K+ + + A + G+
Sbjct: 134 ---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQ 190
Query: 662 LEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKAC 720
+ K+D++ G+ +E+ + PL + + L + Q PA+
Sbjct: 191 YDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ------------NESPALQSGH 238
Query: 721 LDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
E + ++ CL K P +RP+ E +L
Sbjct: 239 WSEYFRNFVD---SCLQKIPQDRPTSEVLL 265
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 126 bits (318), Expect = 1e-32
Identities = 47/312 (15%), Positives = 111/312 (35%), Gaps = 49/312 (15%)
Query: 472 LEEATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRN-FMHHIELISK 529
+E ++F+ + +G G+ G +++ K +G +A + + ++ + RN + ++++ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 530 LRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAA 589
++V G + I + E++ G+L + + +
Sbjct: 61 CNSPYIVGFYGAFYSD-------GEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVS 110
Query: 590 IGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYS 649
I V KG+ +L + ++K ++IL++ K+ + + + +
Sbjct: 111 IAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-SMANSFVGTR 167
Query: 650 GSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709
+ P + DI+ GL L+E+ VGR + L+ V D +
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETP 227
Query: 710 SMVD-------------------------------PAVNKACLDESLKTMMEVCVRCLLK 738
P + + + +CL+K
Sbjct: 228 PRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVN---KCLIK 284
Query: 739 NPAERPSVEDVL 750
NPAER ++ ++
Sbjct: 285 NPAERADLKQLM 296
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 124 bits (313), Expect = 3e-32
Identities = 50/299 (16%), Positives = 114/299 (38%), Gaps = 40/299 (13%)
Query: 486 GEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
G+G+ G +Y + G VAIR + +++ ++ I ++ + ++ ++V+ L
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 88
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
++++ EY+ G+L ++E Q + + ++FLH+
Sbjct: 89 G-------DELWVVMEYLAGGSLTDVVTETCM----DEGQIAAVCRECLQALEFLHSN-- 135
Query: 605 PGVFSNNLKITDILLDQNLVAKISSYNLP-LLAENAEKVGHVIPYSGSIDPTNSARGKLE 663
V ++K +ILL + K++ + + K ++ + P R
Sbjct: 136 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYG 194
Query: 664 EKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLD 722
K+DI+ G++ +E+I G P + + L + N L
Sbjct: 195 PKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA-----------TNGTPELQNPEKLS 243
Query: 723 ESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWHSQSSEGSPISPPRPSRQ 781
+ + RCL + +R S +++L Q + + S ++P + +
Sbjct: 244 AIFRDFLN---RCLDMDVEKRGSAKELL---------QHQFLKIAKPLSSLTPLIAAAK 290
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 125 bits (314), Expect = 8e-32
Identities = 48/278 (17%), Positives = 105/278 (37%), Gaps = 29/278 (10%)
Query: 477 NNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHL 535
+++D +G G+ G ++R G A + + I+ +S LRH L
Sbjct: 26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 85
Query: 536 VSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKG 595
V + + + DD + + +I+E++ G L +++ H ++ + + V KG
Sbjct: 86 V----NLHDAFEDD---NEMVMIYEFMSGGELFEKVAD--EHNKMSEDEAVEYMRQVCKG 136
Query: 596 IQFLHTGIVPGVFSNNLKITDILL--DQNLVAKISSYNLPLLAENAEKVGHVIPYSGSID 653
+ +H +LK +I+ ++ K+ + L + + V +
Sbjct: 137 LCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAA 193
Query: 654 PTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTADESARRSMV 712
P + + D++ G++ ++ G P + + L+N D+SA
Sbjct: 194 PEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSG-- 251
Query: 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
+ E K + + LL +P R ++ L
Sbjct: 252 --------ISEDGKDFIR---KLLLADPNTRMTIHQAL 278
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 123 bits (310), Expect = 9e-32
Identities = 62/320 (19%), Positives = 119/320 (37%), Gaps = 59/320 (18%)
Query: 468 SLEELEEATNNFDTSAFMGEGSQGQMYRGRLKN------GTFVAIRCLKMKKCHSTR-NF 520
L LE NN + +GEG+ G++++ R T VA++ LK + + +F
Sbjct: 4 KLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADF 63
Query: 521 MHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAH--- 577
L+++ + ++V LG C + L+FEY+ G L ++ H
Sbjct: 64 QREAALMAEFDNPNIVKLLGVCAVG-------KPMCLLFEYMAYGDLNEFLRSMSPHTVC 116
Query: 578 ------------------QSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL 619
L+ +++ A VA G+ +L +L + L+
Sbjct: 117 SLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLV 173
Query: 620 DQNLVAKISSYNLPLLAENAEKV---GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILL 676
+N+V KI+ + L +A+ G+ + P + + + D++ +G++L
Sbjct: 174 GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLW 233
Query: 677 EIIVGR--PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVR 734
EI P +++ + A + C E + +
Sbjct: 234 EIFSYGLQPYYGMAHEEVIYYVRDGNI------------LACPENCPLE----LYNLMRL 277
Query: 735 CLLKNPAERPSVEDVLWNLQ 754
C K PA+RPS + LQ
Sbjct: 278 CWSKLPADRPSFCSIHRILQ 297
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 123 bits (310), Expect = 1e-31
Identities = 48/284 (16%), Positives = 101/284 (35%), Gaps = 26/284 (9%)
Query: 470 EELEEATNNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTR-NFMHHIELI 527
++ E+ + +D +G G+ ++ + VAI+C+ K + + I ++
Sbjct: 2 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVL 61
Query: 528 SKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRIS 587
K++H ++V + Y ++LI + V G L I T
Sbjct: 62 HKIKHPNIV----ALDDIYESGG---HLYLIMQLVSGGELFDRI---VEKGFYTERDASR 111
Query: 588 AAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIP 647
V +++LH + + LD++ IS + L + + +
Sbjct: 112 LIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACG 171
Query: 648 YSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTADES 706
G + P A+ + +D + G+I ++ G P + L + L+A D
Sbjct: 172 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSP 231
Query: 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
+ +S K + + K+P +R + E L
Sbjct: 232 YWDD----------ISDSAKDFIR---HLMEKDPEKRFTCEQAL 262
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 122 bits (306), Expect = 2e-31
Identities = 55/291 (18%), Positives = 117/291 (40%), Gaps = 43/291 (14%)
Query: 465 RTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHST---RNF 520
R ++LE +F+ +G+G G +Y R K + +A++ L +
Sbjct: 1 RQWALE-------DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 53
Query: 521 MHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSL 580
+E+ S LRH +++ G+ + +R++LI EY P GT+ +
Sbjct: 54 RREVEIQSHLRHPNILRLYGYFHDA-------TRVYLILEYAPLGTVYREL---QKLSKF 103
Query: 581 TWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE 640
+ + +A + + H+ V ++K ++LL KI+ + + A +
Sbjct: 104 DEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-S 159
Query: 641 KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQA 699
+ + + P +EK+D++ G++ E +VG+ P ++ + K +
Sbjct: 160 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 219
Query: 700 VVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
T + + E + ++ R L NP++RP + +VL
Sbjct: 220 EFTFPDF--------------VTEGARDLIS---RLLKHNPSQRPMLREVL 253
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 120 bits (302), Expect = 7e-31
Identities = 44/291 (15%), Positives = 105/291 (36%), Gaps = 44/291 (15%)
Query: 478 NFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHST---------RNFMHHIELI 527
N++ +G G + R A++ + + S + ++++
Sbjct: 4 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 63
Query: 528 SKLR-HRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRI 586
K+ H +++ FL+F+ + G L ++ +L+ +
Sbjct: 64 RKVSGHPNIIQLKDTYETNT-------FFFLVFDLMKKGELFDYL---TEKVTLSEKETR 113
Query: 587 SAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVI 646
+ + I LH + +LK +ILLD ++ K++ + + EK+ V
Sbjct: 114 KIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVC 170
Query: 647 PYSGSIDP------TNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQA 699
+ P N +++D++ G+I+ ++ G P RK++ +L+ +
Sbjct: 171 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG 230
Query: 700 VVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
+++K ++ R L+ P +R + E+ L
Sbjct: 231 NYQFGSPEWDD----------YSDTVKDLVS---RFLVVQPQKRYTAEEAL 268
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 119 bits (300), Expect = 1e-30
Identities = 58/310 (18%), Positives = 119/310 (38%), Gaps = 45/310 (14%)
Query: 476 TNNFDTSAF-----MGEGSQGQMYRGRLKNGT-----FVAIRCLKMKKCHSTR-NFMHHI 524
T S +G G G++Y+G LK + VAI+ LK R +F+
Sbjct: 1 TTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEA 60
Query: 525 ELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQ 584
++ + H +++ G + + +I EY+ NG L ++ E + Q
Sbjct: 61 GIMGQFSHHNIIRLEGVISKY-------KPMMIITEYMENGALDKFLREKDGE--FSVLQ 111
Query: 585 RISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP-LLAENAEKVG 643
+ G+A G+++L +L +IL++ NLV K+S + L +L ++ E
Sbjct: 112 LVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATY 168
Query: 644 HVIPYSGSI---DPTNSARGKLEEKIDIYDFGLILLEIIVG--RPLKSRKEVDLLKNQLQ 698
I P + K D++ FG+++ E++ RP +++K
Sbjct: 169 TTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMK---- 224
Query: 699 AVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758
++ + + ++ ++C + A RP D++ L +
Sbjct: 225 ------------AINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR 272
Query: 759 VQDAWHSQSS 768
D+ + +
Sbjct: 273 APDSLKTLAD 282
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 119 bits (300), Expect = 2e-30
Identities = 56/282 (19%), Positives = 108/282 (38%), Gaps = 41/282 (14%)
Query: 486 GEGSQGQMYRGRLKN----GTFVAIRCL-KMKKCHSTRNFMHHIELISKLRHRHLVSALG 540
G G G +Y G L + A++ L ++ F+ ++ H +++S LG
Sbjct: 36 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLG 95
Query: 541 HCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLH 600
C S ++ Y+ +G LR++I + + T I + VAKG++FL
Sbjct: 96 ICLR------SEGSPLVVLPYMKHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKFLA 147
Query: 601 TGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE------KVGHVIPYSGSIDP 654
+ +L + +LD+ K++ + L + E K G +P +
Sbjct: 148 S---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV-KWMAL 203
Query: 655 TNSARGKLEEKIDIYDFGLILLEIIVGR--PLKSRKEVDLLKNQLQAVVTADESARRSMV 712
+ K K D++ FG++L E++ P D+ LQ R ++
Sbjct: 204 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG---------RRLL 254
Query: 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754
P + + EV ++C RPS +++ +
Sbjct: 255 QP-------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 289
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 119 bits (298), Expect = 2e-30
Identities = 51/313 (16%), Positives = 107/313 (34%), Gaps = 45/313 (14%)
Query: 470 EELEEATNNFDTSAF-MGEGSQGQMYRGRLK---NGTFVAIRCLKMKKCHS-TRNFMHHI 524
++L +N + +G G+ G + +G + VAI+ LK + T M
Sbjct: 1 KKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREA 60
Query: 525 ELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQ 584
+++ +L + ++V +G C + L+ E G L ++ + + +
Sbjct: 61 QIMHQLDNPYIVRLIGVCQAE--------ALMLVMEMAGGGPLHKFLVG--KREEIPVSN 110
Query: 585 RISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP-LLAENAEKVG 643
V+ G+++L +L ++LL AKIS + L L +
Sbjct: 111 VAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 167
Query: 644 HVIPYSGSI---DPTNSARGKLEEKIDIYDFGLILLEIIVG--RPLKSRKEVDLLKNQLQ 698
+ P K + D++ +G+ + E + +P K K +++ Q
Sbjct: 168 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ 227
Query: 699 AVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ---- 754
C E + + C + +RP V ++
Sbjct: 228 G------------KRMECPPECPPE----LYALMSDCWIYKWEDRPDFLTVEQRMRACYY 271
Query: 755 -FAAQVQDAWHSQ 766
A++V+ H
Sbjct: 272 SLASKVEGHHHHH 284
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 118 bits (297), Expect = 3e-30
Identities = 62/270 (22%), Positives = 108/270 (40%), Gaps = 28/270 (10%)
Query: 486 GEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHST--RNFMHHIELISKLRHRHLVSALGHC 542
G GS +Y+G VA L+ +K + + F E++ L+H ++V
Sbjct: 18 GRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSW 77
Query: 543 FECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTG 602
I L+ E + +GTL++++ + + S + KG+QFLHT
Sbjct: 78 ESTVKGKKC---IVLVTELMTSGTLKTYL---KRFKVMKIKVLRSWCRQILKGLQFLHTR 131
Query: 603 IVPGVFSNNLKITDILL-DQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGK 661
P + +LK +I + KI L L + A VI + P K
Sbjct: 132 -TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL-KRASFAKAVIGTPEFMAP-EMYEEK 188
Query: 662 LEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKAC 720
+E +D+Y FG+ +LE+ P + + ++ S V PA
Sbjct: 189 YDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVT-----------SGVKPASFDKV 237
Query: 721 LDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
+K ++E C+ +N ER S++D+L
Sbjct: 238 AIPEVKEIIE---GCIRQNKDERYSIKDLL 264
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 117 bits (295), Expect = 5e-30
Identities = 53/280 (18%), Positives = 104/280 (37%), Gaps = 32/280 (11%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRH 534
++D +GEG+ G++ + VA++ + MK+ N I + L H +
Sbjct: 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 64
Query: 535 LVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAK 594
+V GH E + +L EY G L I + +
Sbjct: 65 VVKFYGHRREG-------NIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMA 114
Query: 595 GIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGS--- 651
G+ +LH G+ ++K ++LLD+ KIS + L + + + G+
Sbjct: 115 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 171
Query: 652 IDPTNSARGKLE-EKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRS 710
+ P R + E +D++ G++L ++ G D + Q E
Sbjct: 172 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL-----PWDQPSDSCQEYSDWKEKKTYL 226
Query: 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
++ A L + + L++NP+ R ++ D+
Sbjct: 227 NPWKKIDSAPLA--------LLHKILVENPSARITIPDIK 258
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 117 bits (293), Expect = 9e-30
Identities = 48/296 (16%), Positives = 99/296 (33%), Gaps = 47/296 (15%)
Query: 486 GEGSQGQMYRGRLKN---GTFVAIRCLKMKKCHST--RNFMHHIELISKLRHRHLVSALG 540
G G+ G + +G + VA++ LK + + ++ +L + ++V +G
Sbjct: 16 GSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIG 75
Query: 541 HCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLH 600
C L+ E G L ++ ++ + I V+ G+++L
Sbjct: 76 ICEA--------ESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLE 124
Query: 601 TGIVPGVFSNNLKITDILLDQNLVAKISSYNLP-LLAENAEKVGHVIPYSGSI---DPTN 656
+L ++LL AKIS + L L + + P
Sbjct: 125 E---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 181
Query: 657 SARGKLEEKIDIYDFGLILLEIIVG--RPLKSRKEVDLLKNQLQAVVTADESARRSMVDP 714
K K D++ FG+++ E +P + K ++ M++
Sbjct: 182 INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA----------------MLEK 225
Query: 715 AVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWHSQSSEG 770
C + M ++ C + RP V L ++ ++ +EG
Sbjct: 226 GERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL------RNYYYDVVNEG 275
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 117 bits (293), Expect = 2e-29
Identities = 48/305 (15%), Positives = 104/305 (34%), Gaps = 39/305 (12%)
Query: 486 GEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
G G G ++R + + +K+K I +++ RHR+++ H E
Sbjct: 14 GRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVL-VKKEISILNIARHRNIL----HLHE 68
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
+ + +IFE++ + I+ L + +S V + +QFLH+
Sbjct: 69 SFESME---ELVMIFEFISGLDIFERINTSAFE--LNEREIVSYVHQVCEALQFLHS--- 120
Query: 605 PGVFSNNLKITDILLDQ--NLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKL 662
+ +++ +I+ + KI + + + + P +
Sbjct: 121 HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVV 180
Query: 663 EEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACL 721
D++ G ++ ++ G P + +++N + A T DE A + +
Sbjct: 181 STATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKE----------I 230
Query: 722 DESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWHSQSSEGSPISPPRPSRQ 781
++ R L+K R + + L Q W Q E R +
Sbjct: 231 SIEAMDFVD---RLLVKERKSRMTASEAL---------QHPWLKQKIERVSTKVIRTLKH 278
Query: 782 HLSFH 786
+H
Sbjct: 279 RRYYH 283
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 117 bits (294), Expect = 3e-29
Identities = 46/269 (17%), Positives = 98/269 (36%), Gaps = 29/269 (10%)
Query: 486 GEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
G G+ G ++R G + + + I ++++L H L+ + +
Sbjct: 38 GSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLI----NLHD 93
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
+ D + LI E++ G L I+ ++ + I+ +G++ +H
Sbjct: 94 AFEDK---YEMVLILEFLSGGELFDRIAAE--DYKMSEAEVINYMRQACEGLKHMHE--- 145
Query: 605 PGVFSNNLKITDILLD--QNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKL 662
+ ++K +I+ + + KI + L E V + P R +
Sbjct: 146 HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPV 205
Query: 663 EEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACL 721
D++ G++ ++ G P +++ L+N + DE A S +
Sbjct: 206 GFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSS----------V 255
Query: 722 DESLKTMMEVCVRCLLKNPAERPSVEDVL 750
K ++ L K P +R +V D L
Sbjct: 256 SPEAKDFIK---NLLQKEPRKRLTVHDAL 281
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 114 bits (287), Expect = 6e-29
Identities = 46/289 (15%), Positives = 105/289 (36%), Gaps = 32/289 (11%)
Query: 476 TNNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHST---RNFMHHIELISKLR 531
++ ++ +G G +++ R L+ VA++ L+ F + + L
Sbjct: 6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 65
Query: 532 HRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIG 591
H +V+ + + +++ EYV TLR + H +T + I
Sbjct: 66 HPAIVAVYDTGEA---ETPAGPLPYIVMEYVDGVTLRDIV---HTEGPMTPKRAIEVIAD 119
Query: 592 VAKGIQFLHTGIVPGVFSNNLKITDILLDQN----LVAKISSYNLPLLAENAEKVGHVIP 647
+ + F H G+ ++K +I++ ++ + + + + VI
Sbjct: 120 ACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 176
Query: 648 YSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTADES 706
+ + P + ++ + D+Y G +L E++ G P V + +
Sbjct: 177 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHV--------- 227
Query: 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERP-SVEDVLWNLQ 754
R + P+ L L ++ + L KNP R + ++ +L
Sbjct: 228 -REDPIPPSARHEGLSADLDAVVL---KALAKNPENRYQTAAEMRADLV 272
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 114 bits (286), Expect = 7e-29
Identities = 49/286 (17%), Positives = 99/286 (34%), Gaps = 38/286 (13%)
Query: 486 GEGSQGQMYRGRLKN----GTFVAIRCLKMKKCHSTR-NFMHHIELISKLRHRHLVSALG 540
GEG G +++G + VAI+ K S R F+ + + H H+V +G
Sbjct: 16 GEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG 75
Query: 541 HCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLH 600
E +++I E G LRS++ SL I A ++ + +L
Sbjct: 76 VITENP--------VWIIMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAYLE 125
Query: 601 TGIVPGVFSNNLKITDILLDQNLVAKISSYNL-PLLAENAEKVGHVIPYSGSIDPTNSAR 659
+ ++ ++L+ N K+ + L + ++ S
Sbjct: 126 S---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 182
Query: 660 -GKLEEKIDIYDFGLILLEIIVG--RPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAV 716
+ D++ FG+ + EI++ +P + K D++ R + P
Sbjct: 183 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG--------ERLPMPPNC 234
Query: 717 NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDA 762
+ +C +P+ RP ++ L + + A
Sbjct: 235 PPTLYS--------LMTKCWAYDPSRRPRFTELKAQLSTILEEEKA 272
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 115 bits (288), Expect = 8e-29
Identities = 55/304 (18%), Positives = 108/304 (35%), Gaps = 45/304 (14%)
Query: 470 EELEEATNNFDTSAFMGEGSQGQMYRGRLKN------GTFVAIRCLKMKKCHSTR-NFMH 522
+E E A S +G+GS G +Y G K T VAI+ + R F++
Sbjct: 13 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 72
Query: 523 HIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI-------SEGH 575
++ + H+V LG + +I E + G L+S++ +
Sbjct: 73 EASVMKEFNCHHVVRLLGVVSQG-------QPTLVIMELMTRGDLKSYLRSLRPAMANNP 125
Query: 576 AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635
+ ++ I A +A G+ +L+ +L + ++ ++ KI + +
Sbjct: 126 VLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 182
Query: 636 AENAEKVGHVIPYSGS---IDPTNSARGKLEEKIDIYDFGLILLEIIVGR--PLKSRKEV 690
+ + P + G D++ FG++L EI P +
Sbjct: 183 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 242
Query: 691 DLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
+L+ + E D C D + E+ C NP RPS +++
Sbjct: 243 QVLRFVM-------EGGLLDKPDN-----CPDM----LFELMRMCWQYNPKMRPSFLEII 286
Query: 751 WNLQ 754
+++
Sbjct: 287 SSIK 290
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 114 bits (286), Expect = 1e-28
Identities = 63/298 (21%), Positives = 114/298 (38%), Gaps = 46/298 (15%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRLKNG---TFVAIRCLKMKKCHS-TRNFMHHIELISKL-R 531
N+ +GEG+ GQ+ + R+K AI+ +K R+F +E++ KL
Sbjct: 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 69
Query: 532 HRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAH-------------Q 578
H ++++ LG C ++L EY P+G L ++ +
Sbjct: 70 HPNIINLLGACEHR-------GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAS 122
Query: 579 SLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAEN 638
+L+ Q + A VA+G+ +L +L +IL+ +N VAKI+ + L E
Sbjct: 123 TLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQEV 179
Query: 639 AEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR--PLKSRKEVDLLKNQ 696
K + + D++ +G++L EI+ P +L +
Sbjct: 180 YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL 239
Query: 697 LQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754
Q C DE + ++ +C + P ERPS +L +L
Sbjct: 240 PQG------------YRLEKPLNCDDE----VYDLMRQCWREKPYERPSFAQILVSLN 281
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 113 bits (283), Expect = 2e-28
Identities = 52/278 (18%), Positives = 92/278 (33%), Gaps = 41/278 (14%)
Query: 486 GEGSQGQMYRGRLK----NGTFVAIRCLKMKKCHS---TRNFMHHIELISKLRHRHLVSA 538
G+GS G + RG VA++CLK +F+ + + L HR+L+
Sbjct: 17 GDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRL 76
Query: 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQF 598
G + ++ E P G+L + + H L R A+ VA+G+ +
Sbjct: 77 YGVVLTPP--------MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGY 126
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKIS----SYNLPLLAENAEKVGHVIPYSGSIDP 654
L + +L ++LL + KI LP ++ H P
Sbjct: 127 LES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 183
Query: 655 TNSARGKLEEKIDIYDFGLILLEIIVG--RPLKSRKEVDLLKNQLQAVVTADESARRSMV 712
+ D + FG+ L E+ P +L +
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKID-----------KEGE 232
Query: 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
+ C + + V V+C P +RP+ +
Sbjct: 233 RLPRPEDCPQD----IYNVMVQCWAHKPEDRPTFVALR 266
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 115 bits (288), Expect = 2e-28
Identities = 56/289 (19%), Positives = 109/289 (37%), Gaps = 24/289 (8%)
Query: 478 NFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLV 536
++ + +G GS G +Y+ +L +G VAI+ + K R ++++ KL H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIV 76
Query: 537 SALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGI 596
L + F + + L+ +YVP R A Q+L + + +
Sbjct: 77 R-LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 597 QFLHTGIVPGVFSNNLKITDILLDQN-LVAKISSYNLPLLAENAEKVGHVIPYSGSIDPT 655
++H+ G+ ++K ++LLD + V K+ + E I P
Sbjct: 136 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE 192
Query: 656 NSARG-KLEEKIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQAVVTADESARRSMVD 713
ID++ G +L E+++G+P+ VD L ++ + T R M
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 252
Query: 714 -------PAVNKACLDESLKTMM-----EVCVRCLLKNPAERPSVEDVL 750
P + + + +C R L P R + +
Sbjct: 253 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 110 bits (276), Expect = 2e-27
Identities = 56/297 (18%), Positives = 113/297 (38%), Gaps = 31/297 (10%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLK--NGTFVAIRCLKMKKCHST--RNFMHHIELISKL 530
A ++ A +GEG+ G++++ R G FVA++ ++++ + + + ++ L
Sbjct: 5 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 64
Query: 531 ---RHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRIS 587
H ++V C D + ++ L+FE+V + +
Sbjct: 65 ETFEHPNVVRLFDVCTVSRTDRET--KLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDM- 121
Query: 588 AAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIP 647
+ +G+ FLH+ V +LK +IL+ + K++ + L + + V+
Sbjct: 122 -MFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV 177
Query: 648 YSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQAVVTADES 706
P + +D++ G I E+ +PL + +VD L L + E
Sbjct: 178 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 237
Query: 707 A-------------RRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
+S +DE K ++ +CL NPA+R S L
Sbjct: 238 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLL---KCLTFNPAKRISAYSAL 291
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 110 bits (275), Expect = 3e-27
Identities = 45/281 (16%), Positives = 101/281 (35%), Gaps = 38/281 (13%)
Query: 478 NFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHS---TRNFMHHIELISKLRHR 533
+F +GEGS + R L AI+ L+ + +++S+L H
Sbjct: 9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 68
Query: 534 HLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVA 593
V + + DD +++ Y NG L +I S T +
Sbjct: 69 FFV----KLYFTFQDD---EKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIV 118
Query: 594 KGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEK---VGHVIPYSG 650
+++LH G+ +LK +ILL++++ +I+ + + K + +
Sbjct: 119 SALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 175
Query: 651 SIDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTADESARR 709
+ P + D++ G I+ +++ G P ++ E + + ++ E
Sbjct: 176 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK--- 232
Query: 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
+ ++E + L+ + +R E++
Sbjct: 233 -----------FFPKARDLVE---KLLVLDATKRLGCEEME 259
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 108 bits (271), Expect = 2e-26
Identities = 60/311 (19%), Positives = 107/311 (34%), Gaps = 58/311 (18%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRLKN------GTFVAIRCLKMKKCHSTRN-FMHHIELISK 529
N + +G G+ G++ VA++ LK K S R M ++++++
Sbjct: 37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 96
Query: 530 L-RHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI----------------- 571
L H ++V+ LG C I+LIFEY G L +++
Sbjct: 97 LGSHENIVNLLGACTLS-------GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQ 149
Query: 572 ---SEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKIS 628
E LT+ + A VAKG++FL +L ++L+ V KI
Sbjct: 150 KRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKIC 206
Query: 629 SYNLPLLAENAEKVGHVIPYSGSI---DPTNSARGKLEEKIDIYDFGLILLEIIVG--RP 683
+ L + + P + G K D++ +G++L EI P
Sbjct: 207 DFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNP 266
Query: 684 LKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAER 743
+Q D+ + E + +M+ C + +R
Sbjct: 267 YPGIPVDANFYKLIQNGFKMDQPFYAT------------EEIYIIMQ---SCWAFDSRKR 311
Query: 744 PSVEDVLWNLQ 754
PS ++ L
Sbjct: 312 PSFPNLTSFLG 322
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 108 bits (270), Expect = 2e-26
Identities = 53/319 (16%), Positives = 109/319 (34%), Gaps = 39/319 (12%)
Query: 479 FDTSAFMGEGSQGQMYRGRLKN-----GTFVAIRCLKMKKC-HSTRNFMHHIELISKLRH 532
F +G G+ G +Y+G VAI+ L+ + + + +++ + +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 533 RHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGV 592
H+ LG C S + LI + +P G L ++ E + ++ + +
Sbjct: 71 PHVCRLLGICLT--------STVQLITQLMPFGCLLDYVREHKDNIG--SQYLLNWCVQI 120
Query: 593 AKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSI 652
AKG+ +L + +L ++L+ KI+ + L L EK H I
Sbjct: 121 AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 177
Query: 653 ---DPTNSARGKLEEKIDIYDFGLILLEII-VGRPLKSRKEVDLLKNQLQAVVTADESAR 708
+ + D++ +G+ + E++ G + + L E
Sbjct: 178 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-------EKGE 230
Query: 709 RSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNL-QFAAQVQDAWHSQS 767
R P + V+C + + RP +++ + A Q Q
Sbjct: 231 RLPQPPICTIDVYM--------IMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQG 282
Query: 768 SEGSPISPPRPSRQHLSFH 786
E + P S + +
Sbjct: 283 DERMHLPSPTDSNFYRALM 301
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 105 bits (262), Expect = 1e-25
Identities = 49/291 (16%), Positives = 104/291 (35%), Gaps = 30/291 (10%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHST--RNFMHHIELISKLRHRH 534
+ +GEG+ G +Y+ + G A++ ++++K + I ++ +L+H +
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 535 LVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAK 594
+V R+ L+FE++ + L S + +
Sbjct: 62 IVKLYDVIHTKK-------RLVLVFEHLDQDLKKLLD---VCEGGLESVTAKSFLLQLLN 111
Query: 595 GIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL--PLLAENAEKVGHVIPYSGSI 652
GI + H V +LK ++L+++ KI+ + L + ++
Sbjct: 112 GIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRA 168
Query: 653 DPTNSARGKLEEKIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQAVVTADESARRSM 711
K IDI+ G I E++ G PL E D L + + T + ++
Sbjct: 169 PDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNV 228
Query: 712 VD--------PAVNKACLDESLKTMMEVCV----RCLLKNPAERPSVEDVL 750
+ + LK + E + + L +P +R + + L
Sbjct: 229 TELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQAL 279
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 105 bits (264), Expect = 2e-25
Identities = 36/270 (13%), Positives = 91/270 (33%), Gaps = 25/270 (9%)
Query: 486 GEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTRNFMHHIELISKL-RHRHLVSALGHCF 543
G G G++ + + A+ K +EL + + H+V +
Sbjct: 21 GLGINGKVLQIFNKRTQEKFAL-----KMLQDCPKARREVELHWRASQCPHIVRIVDVYE 75
Query: 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI 603
Y + ++ E + G L S I + Q+ T + + + IQ+LH+
Sbjct: 76 NLYAGRK---CLLIVMECLDGGELFSRIQD-RGDQAFTEREASEIMKSIGEAIQYLHS-- 129
Query: 604 VPGVFSNNLKITDILLD---QNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARG 660
+ ++K ++L N + K++ + + + + P
Sbjct: 130 -INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 188
Query: 661 KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKAC 720
K ++ D++ G+I+ ++ G P + ++ + + + V++
Sbjct: 189 KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEV 248
Query: 721 LDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
+ L P +R ++ + +
Sbjct: 249 KM--------LIRNLLKTEPTQRMTITEFM 270
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 104 bits (260), Expect = 3e-25
Identities = 51/296 (17%), Positives = 111/296 (37%), Gaps = 52/296 (17%)
Query: 486 GEGSQGQMYRGRLK--------NGTFVAIRCLKMKKCHS-TRNFMHHIELISKL-RHRHL 535
GEG+ GQ+ T VA++ LK + + +E++ + +H+++
Sbjct: 22 GEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNI 81
Query: 536 VSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI-------------SEGHAHQSLTW 582
++ LG C + +++I EY G LR ++ + + L+
Sbjct: 82 INLLGACTQD-------GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 134
Query: 583 TQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKV 642
+S A VA+G+++L + +L ++L+ ++ V KI+ + L + +
Sbjct: 135 KDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 191
Query: 643 GHVIPYSGSIDPTNS---ARGKLEEKIDIYDFGLILLEII-VGRPLKSRKEVDLLKNQLQ 698
+ + D++ FG++L EI +G V+ L L
Sbjct: 192 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL- 250
Query: 699 AVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754
+ C +E + + C P++RP+ + ++ +L
Sbjct: 251 ----------KEGHRMDKPSNCTNE----LYMMMRDCWHAVPSQRPTFKQLVEDLD 292
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 105 bits (262), Expect = 4e-25
Identities = 49/299 (16%), Positives = 110/299 (36%), Gaps = 32/299 (10%)
Query: 474 EATNNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTRN-FMHHIELISKLR 531
+ + +++GEG+ G + N VAI+ + + + + I+++ + R
Sbjct: 5 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 64
Query: 532 HRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIG 591
H +++ + + + ++ L + H L+
Sbjct: 65 HENIIGINDIIRAPTIEQ---MKDVYLVTHLMGADLYKLLKTQH----LSNDHICYFLYQ 117
Query: 592 VAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE----KVGHVIP 647
+ +G++++H+ V +LK +++LL+ KI + L +A+ + +
Sbjct: 118 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 174
Query: 648 YSGSIDPTNSARGKL-EEKIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQAVVTADE 705
P K + IDI+ G IL E++ RP+ + +D L + L + + +
Sbjct: 175 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 234
Query: 706 SARRSMVD----------PAVNKACLDESLKTMMEVCV----RCLLKNPAERPSVEDVL 750
+++ P NK + + + L NP +R VE L
Sbjct: 235 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 293
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 103 bits (258), Expect = 5e-25
Identities = 53/303 (17%), Positives = 96/303 (31%), Gaps = 48/303 (15%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKCHST-RNFMHHIELISK 529
+ +G G+ GQ+ VA++ LK HS R M ++++
Sbjct: 13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 72
Query: 530 LRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI-------------SEGHA 576
+ H V L + +I E+ G L +++ E
Sbjct: 73 IGHHLNVVNLLGAC-----TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 127
Query: 577 HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636
LT I + VAKG++FL + +L +ILL + V KI + L
Sbjct: 128 KDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDI 184
Query: 637 ENAEKVGHVIPYSGSIDPTNSA---RGKLEEKIDIYDFGLILLEIIVGR--PLKSRKEVD 691
+ + D++ FG++L EI P K +
Sbjct: 185 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 244
Query: 692 LLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLW 751
+L + E M + + C P++RP+ +++
Sbjct: 245 EFCRRL-----------KEGTRMRAPDYTTPE----MYQTMLDCWHGEPSQRPTFSELVE 289
Query: 752 NLQ 754
+L
Sbjct: 290 HLG 292
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 104 bits (259), Expect = 6e-25
Identities = 49/295 (16%), Positives = 98/295 (33%), Gaps = 49/295 (16%)
Query: 486 GEGSQGQMYRGRLK------NGTFVAIRCLKMKKCHSTRN-FMHHIELISKL-RHRHLVS 537
G G+ G++ VA++ LK + R M ++++S L H ++V+
Sbjct: 32 GAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVN 91
Query: 538 ALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGH---------------AHQSLTW 582
LG C +I EY G L +++ +L
Sbjct: 92 LLGACTI-------GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 144
Query: 583 TQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKV 642
+S + VAKG+ FL + +L +ILL + KI + L +N
Sbjct: 145 EDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 201
Query: 643 GHVIPYSGS---IDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQA 699
+ P + + D++ +G+ L E+
Sbjct: 202 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM---------- 251
Query: 700 VVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754
+S M+ + + M ++ C +P +RP+ + ++ ++
Sbjct: 252 ---PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 303
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 102 bits (255), Expect = 1e-24
Identities = 58/317 (18%), Positives = 112/317 (35%), Gaps = 43/317 (13%)
Query: 484 FMGEGSQGQMYRGRLKN-GTFVAIRCLKMKKCHST-----RNFMHHIELISKLRHRHLVS 537
F+GEG +Y+ R KN VAI+ +K+ R + I+L+ +L H +++
Sbjct: 5 FLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII- 63
Query: 538 ALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQ 597
+ + S I L+F+++ LT + + + +G++
Sbjct: 64 ---GLLDAFGHKS---NISLVFDFMETDLEVIIK---DNSLVLTPSHIKAYMLMTLQGLE 114
Query: 598 FLHTGIVPGVFSNNLKITDILLDQNLVAKIS--SYNLPLLAENAEKVGHVIPYSGSIDPT 655
+LH + +LK ++LLD+N V K++ + N V+
Sbjct: 115 YLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPEL 171
Query: 656 NSARGKLEEKIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQAVVTADE-------SA 707
+D++ G IL E+++ P ++D L + + T E S
Sbjct: 172 LFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSL 231
Query: 708 RRSMVDPAVNKACLDESLKTMMEVCV----RCLLKNPAERPSVEDVLWNLQFAAQVQDAW 763
+ + L + + L NP R + L + +
Sbjct: 232 PDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQAL---------KMKY 282
Query: 764 HSQSSEGSPISP-PRPS 779
S +P PRP+
Sbjct: 283 FSNRPGPTPGCQLPRPN 299
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 100 bits (251), Expect = 8e-24
Identities = 56/291 (19%), Positives = 106/291 (36%), Gaps = 37/291 (12%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHS---TRNFMHHIELISK-LR 531
+F +G+GS G+++ K F AI+ LK M ++S
Sbjct: 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 61
Query: 532 HRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIG 591
H L H F + +F + EY+ G L I + ++ A
Sbjct: 62 HPFLT----HMFCTFQTKE---NLFFVMEYLNGGDLMYHI---QSCHKFDLSRATFYAAE 111
Query: 592 VAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP-LLAENAEKVGHVIPYSG 650
+ G+QFLH+ G+ +LK+ +ILLD++ KI+ + + K
Sbjct: 112 IILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPD 168
Query: 651 SIDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTADESARR 709
I P K +D + FG++L E+++G+ P + E +L +
Sbjct: 169 YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRW--- 225
Query: 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760
L++ K ++ + ++ P +R V + ++
Sbjct: 226 -----------LEKEAKDLLV---KLFVREPEKRLGVRGDIRQHPLFREIN 262
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 100 bits (249), Expect = 8e-24
Identities = 51/291 (17%), Positives = 106/291 (36%), Gaps = 30/291 (10%)
Query: 478 NFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHST--RNFMHHIELISKLRHRH 534
NF +GEG+ G +Y+ R K G VA++ +++ + I L+ +L H +
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 535 LVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAK 594
+V + ++ +++L+FE++ + + A + S + +
Sbjct: 63 IV----KLLDVIHTEN---KLYLVFEFLHQDLKKFM--DASALTGIPLPLIKSYLFQLLQ 113
Query: 595 GIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL--PLLAENAEKVGHVIPYSGSI 652
G+ F H+ V +LK ++L++ K++ + L V+
Sbjct: 114 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 170
Query: 653 DPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTADESARRSM 711
+DI+ G I E++ R E+D L + + T DE +
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 230
Query: 712 VD--------PAVNKACLDESLKTMMEVCV----RCLLKNPAERPSVEDVL 750
P + + + + E + L +P +R S + L
Sbjct: 231 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 281
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 101 bits (252), Expect = 1e-23
Identities = 46/278 (16%), Positives = 90/278 (32%), Gaps = 35/278 (12%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHST------RNFMHHIELISK 529
N+F +G G G++Y R G A++CL K+ N + L+S
Sbjct: 4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 63
Query: 530 LRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAA 589
+V + ++ I + + G L +S+ A
Sbjct: 64 GDCPFIV----CMSYAFHTPD---KLSFILDLMNGGDLHYHLSQHGVFS---EADMRFYA 113
Query: 590 IGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYS 649
+ G++ +H V +LK +ILLD++ +IS L + V +
Sbjct: 114 AEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHG 170
Query: 650 GSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTADESAR 708
+ D + G +L +++ G P + K D + R
Sbjct: 171 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID-----------R 219
Query: 709 RSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSV 746
++ L++++E L ++ R
Sbjct: 220 MTLTMAVELPDSFSPELRSLLE---GLLQRDVNRRLGC 254
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 97.9 bits (243), Expect = 5e-23
Identities = 52/296 (17%), Positives = 112/296 (37%), Gaps = 41/296 (13%)
Query: 467 FSLEELEEATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRN------ 519
F E ++ + +DT +G G + + R K G A + +K ++ S+R
Sbjct: 3 FRQENVD---DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 59
Query: 520 FMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQS 579
+ ++ +++H +++ E Y + + + LI E V G L ++ +S
Sbjct: 60 IEREVSILKEIQHPNVI----TLHEVYENKT---DVILILELVAGGELFDFL---AEKES 109
Query: 580 LTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN----LVAKISSYNLPLL 635
LT + + G+ +LH+ + +LK +I+L KI + L
Sbjct: 110 LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 166
Query: 636 AENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLK 694
+ + ++ + P L + D++ G+I ++ G P + + L
Sbjct: 167 IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 226
Query: 695 NQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
N ++ + K + R L+K+P +R +++D L
Sbjct: 227 NVSAVNYEFEDEYFSN----------TSALAKDFIR---RLLVKDPKKRMTIQDSL 269
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 97.6 bits (242), Expect = 1e-22
Identities = 53/306 (17%), Positives = 116/306 (37%), Gaps = 32/306 (10%)
Query: 467 FSLEELEEAT----NNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHST--RN 519
F +E+ + + +G G+ G + + G VAI+ L +
Sbjct: 4 FYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKR 63
Query: 520 FMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQS 579
+ L+ +RH +++ L D + +L+ ++ + + H+
Sbjct: 64 AYRELRLLKHMRHENVIGLLDVFTPDETLDD-FTDFYLVMPFMGT-----DLGKLMKHEK 117
Query: 580 LTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENA 639
L + + KG++++H G+ +LK ++ ++++ KI + L A++
Sbjct: 118 LGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLARQADS- 173
Query: 640 EKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQ 698
E G+V+ + + +DI+ G I+ E+I G+ L K +D LK ++
Sbjct: 174 EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMK 233
Query: 699 AVVT----------ADESARRSMVDPAVNKACLDESLKTMMEVCV----RCLLKNPAERP 744
T +DE+ P + K L + V + L+ + +R
Sbjct: 234 VTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRV 293
Query: 745 SVEDVL 750
+ + L
Sbjct: 294 TAGEAL 299
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 95.3 bits (236), Expect = 5e-22
Identities = 46/300 (15%), Positives = 116/300 (38%), Gaps = 32/300 (10%)
Query: 477 NNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHST--RNFMHHIELISKLRHR 533
+ ++ A +G+G+ G++++ R K G VA++ + M+ + I+++ L+H
Sbjct: 10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 69
Query: 534 HLVSALGHCFEC-YFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGV 592
++V+ + C + I+L+F++ + + T ++ +
Sbjct: 70 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLS---NVLVKFTLSEIKRVMQML 126
Query: 593 AKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSI 652
G+ ++H + ++K ++L+ ++ V K++ + L A+ + +
Sbjct: 127 LNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVV 183
Query: 653 DPTNSARGKLE------EKIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQAVVTADE 705
L ID++ G I+ E+ P+ + E L Q +
Sbjct: 184 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITP 243
Query: 706 SARRSMVD---------PAVNKACLDESLKTMM------EVCVRCLLKNPAERPSVEDVL 750
++ + K + + LK + ++ + L+ +PA+R +D L
Sbjct: 244 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDAL 303
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 93.5 bits (231), Expect = 1e-21
Identities = 50/293 (17%), Positives = 102/293 (34%), Gaps = 32/293 (10%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHST--RNFMHHIELISKLRHR 533
++ +GEG+ G +++ + + VA++ +++ + + I L+ +L+H+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 534 HLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVA 593
++V ++ L+FE+ + + + L S +
Sbjct: 62 NIVRLHDVLHSDK-------KLTLVFEFCDQDLKKYFD---SCNGDLDPEIVKSFLFQLL 111
Query: 594 KGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKV--GHVIPYSGS 651
KG+ F H+ V +LK ++L+++N K++++ L + V+
Sbjct: 112 KGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYR 168
Query: 652 IDPTNSARGKLEEKIDIYDFGLILLEIIVGR--PLKSRKEVDLLKNQLQAVVTADESARR 709
ID++ G I E+ D LK + + T E
Sbjct: 169 PPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWP 228
Query: 710 SMVDPAVNKACLDESLKTMMEVCV------------RCLLKNPAERPSVEDVL 750
SM K T + V L NP +R S E+ L
Sbjct: 229 SMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEAL 281
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 93.2 bits (231), Expect = 3e-21
Identities = 53/294 (18%), Positives = 108/294 (36%), Gaps = 49/294 (16%)
Query: 467 FSLEELEEATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHS---TRNFMH 522
+SL+ +F +G GS G+++ R + NG + A++ LK + +
Sbjct: 1 YSLQ-------DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTND 53
Query: 523 HIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTW 582
++S + H ++ G + +IF+I +Y+ G L S + +
Sbjct: 54 ERLMLSIVTHPFIIRMWGTFQDA-------QQIFMIMDYIEGGELFSLLRKSQ-RFPNPV 105
Query: 583 TQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKV 642
+ +A + L + +LK +ILLD+N KI+ + +
Sbjct: 106 AKFYAAEV-----CLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYT 160
Query: 643 GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVV 701
P I P + + ID + FG+++ E++ G P + + L A +
Sbjct: 161 LCGTP--DYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAEL 218
Query: 702 TADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAER-----PSVEDVL 750
+E +K ++ R + ++ ++R EDV
Sbjct: 219 RFPPF--------------FNEDVKDLLS---RLITRDLSQRLGNLQNGTEDVK 255
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 90.7 bits (224), Expect = 1e-20
Identities = 31/278 (11%), Positives = 79/278 (28%), Gaps = 28/278 (10%)
Query: 486 GEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
G GS G +Y G + G VAI+ +K H ++ ++ + + C
Sbjct: 16 GSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGA 73
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHT-GI 603
++ E + + + + + A + I+++H+
Sbjct: 74 ------EGDYNVMVMELLGPSLEDLFN---FCSRKFSLKTVLLLADQMISRIEYIHSKNF 124
Query: 604 VPG-VFSNNLKITDILLDQNL------VAKISSYNLPLLAENAEKVGHVIPYSGSIDPTN 656
+ V +N + + +AK + ++ +
Sbjct: 125 IHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINT 184
Query: 657 SARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAV 716
+ + D+ G +L+ +G + + + + + S +
Sbjct: 185 HLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYE----RISEKKMSTPIEVL 240
Query: 717 NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754
K E T + C ++P + +
Sbjct: 241 CKGYPSE-FATYLN---FCRSLRFDDKPDYSYLRQLFR 274
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 88.4 bits (218), Expect = 1e-19
Identities = 38/303 (12%), Positives = 95/303 (31%), Gaps = 49/303 (16%)
Query: 477 NNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLR-HRH 534
+++ +G G +++ + N V ++ LK K + I+++ LR +
Sbjct: 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPN 91
Query: 535 LVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAK 594
+++ D L+FE+V N + Q+LT + K
Sbjct: 92 IITLAD-----IVKDPVSRTPALVFEHVNNTDFKQLY------QTLTDYDIRFYMYEILK 140
Query: 595 GIQFLHTGIVPGVFSNNLKITDILLD-QNLVAKISSYNLP-LLAENAEKVGHVIPYSGSI 652
+ + H+ G+ ++K ++++D ++ ++ + L E V
Sbjct: 141 ALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 197
Query: 653 DPTNSARGKLEEKIDIYDFGLILLEIIVGRP--LKSRKEVDLLKNQLQAVVT-------- 702
+ +D++ G +L +I + D L + + T
Sbjct: 198 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 257
Query: 703 ---------------ADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVE 747
R + N+ + ++ + L + R +
Sbjct: 258 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLD---KLLRYDHQSRLTAR 314
Query: 748 DVL 750
+ +
Sbjct: 315 EAM 317
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 87.9 bits (216), Expect = 1e-19
Identities = 87/318 (27%), Positives = 131/318 (41%), Gaps = 21/318 (6%)
Query: 31 SQAQTLLRIQGLLNNPAVLSSWNITTEFCNTEPTSSLTVVCYEES----ITQLHIVGNKR 86
Q LL+I+ L NP LSSW TT+ CN + L V+C ++ + L + G
Sbjct: 6 QDKQALLQIKKDLGNPTTLSSWLPTTDCCNR---TWLGVLCDTDTQTYRVNNLDLSGLNL 62
Query: 87 APMLPLSFSMDSFVTTLVKLPDLKVLRLVSL-GLWGPLSGKISRLSSLEILNMSSNFLNG 145
P+ S L LP L L + + L GP+ I++L+ L L ++ ++G
Sbjct: 63 PKPYPIPSS-------LANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSG 115
Query: 146 AIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENL 205
AIP LS + +L TL N L+G +P + SLP L ++ N +G +PDS+ L
Sbjct: 116 AIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKL 175
Query: 206 RV-LALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIP 264
+ +S N G++P L +DL N L + S
Sbjct: 176 FTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAF 235
Query: 265 AEVSSYYQLQRL--DLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELG 322
DL +NR G PQ L L + LN++ N L G++
Sbjct: 236 DLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEI-PQGGNLQRFD 294
Query: 323 FVDLSSN-LLTG-QLPNC 338
++N L G LP C
Sbjct: 295 VSAYANNKCLCGSPLPAC 312
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 87.9 bits (217), Expect = 2e-19
Identities = 44/275 (16%), Positives = 102/275 (37%), Gaps = 36/275 (13%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHST---RNFMHHIELISKLRH 532
N+FD +G+G+ G++ R K G + A++ L+ + + + + ++ RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 533 RHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGV 592
L + + R+ + EY G L + + T + +
Sbjct: 65 PFLT-------ALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGAEI 114
Query: 593 AKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP-LLAENAEKVGHVIPYSGS 651
+++LH+ V ++K+ +++LD++ KI+ + L + +
Sbjct: 115 VSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEY 171
Query: 652 IDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTADESARRS 710
+ P +D + G+++ E++ GR P ++ L + L + +
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT---- 227
Query: 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPS 745
L K+++ L K+P +R
Sbjct: 228 ----------LSPEAKSLLA---GLLKKDPKQRLG 249
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 87.4 bits (215), Expect = 6e-19
Identities = 52/202 (25%), Positives = 81/202 (40%), Gaps = 12/202 (5%)
Query: 128 SRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLR 187
++L++LE L ++N ++ P ILT+L L L+ N L L SL L L L
Sbjct: 194 AKLTNLESLIATNNQISDITPLG--ILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLA 249
Query: 188 NNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGK 247
NN + P S L L L L N P + EN K
Sbjct: 250 NNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLK 307
Query: 248 KLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKL 307
L + L N P VSS +LQRL ++N+ +L +L +I +L+ N++
Sbjct: 308 NLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSDV--SSLANLTNINWLSAGHNQI 363
Query: 308 TGKLFDDLSCNPELGFVDLSSN 329
+ L+ + + L+
Sbjct: 364 SD--LTPLANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 74.3 bits (181), Expect = 1e-14
Identities = 47/183 (25%), Positives = 75/183 (40%), Gaps = 10/183 (5%)
Query: 154 LTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNN 213
LT+L++LI N ++ P + L LSL N + + L NL L L+NN
Sbjct: 196 LTNLESLIATNNQISDITPLGIL--TNLDELSLNGNQLKD--IGTLASLTNLTDLDLANN 251
Query: 214 HFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQL 273
P SGLT L L L N + P G +T + N+ + + +S+ L
Sbjct: 252 QISNLAP-LSGLTKLTELKLGANQISNISPLAGLTALTNL-ELNENQLEDISPISNLKNL 309
Query: 274 QRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTG 333
L L N P + SL + L A+NK++ L+ + ++ N ++
Sbjct: 310 TYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSD--VSSLANLTNINWLSAGHNQISD 365
Query: 334 QLP 336
P
Sbjct: 366 LTP 368
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 70.8 bits (172), Expect = 2e-13
Identities = 38/169 (22%), Positives = 63/169 (37%), Gaps = 27/169 (15%)
Query: 89 MLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIP 148
L L+ + + TL L +L L L + + +S L+ L L + +N ++ P
Sbjct: 223 ELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP 280
Query: 149 --------------------QELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRN 188
+S L +L L L N ++ P + SL L L N
Sbjct: 281 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFAN 338
Query: 189 NMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNA 237
N + S + L N+ L+ +N P + LT + L L + A
Sbjct: 339 NKVSD--VSSLANLTNINWLSAGHNQISDLTP-LANLTRITQLGLNDQA 384
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 66.9 bits (162), Expect = 3e-12
Identities = 38/172 (22%), Positives = 65/172 (37%), Gaps = 28/172 (16%)
Query: 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENM 166
+L L L L G ++ L++L L++++N ++ P LS LT L L L N
Sbjct: 219 TNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQ 274
Query: 167 LAGRVP--------------------DWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLR 206
++ P + +L L L+L N + P S L L+
Sbjct: 275 ISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQ 332
Query: 207 VLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVG-KKLVTMILSKN 257
L +NN V + LT + L +N + P ++ + L+
Sbjct: 333 RLFFANNKVSD-VSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 45.4 bits (106), Expect = 2e-05
Identities = 52/258 (20%), Positives = 101/258 (39%), Gaps = 27/258 (10%)
Query: 100 VTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQT 159
+ L + L+ LG+ + G + L++L +N S+N L P L LT L
Sbjct: 37 TVSQTDLDQVTTLQADRLGIKS-IDG-VEYLNNLTQINFSNNQLTDITP--LKNLTKLVD 92
Query: 160 LILDENMLAGRVPDWLGSLPIL----------------AVLSLRNNMFNGTLPDSFSYLE 203
++++ N +A P + R + + T+ D +
Sbjct: 93 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 152
Query: 204 NLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVG-KKLVTMILSKNKFRSA 262
+ LS + ++ + LT L+ LD+ +N + L ++I + N+
Sbjct: 153 LTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDI 212
Query: 263 IPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELG 322
P + L L L+ N+ L SL ++T L++A+N+++ LS +L
Sbjct: 213 TP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISN--LAPLSGLTKLT 266
Query: 323 FVDLSSNLLTGQLPNCLL 340
+ L +N ++ P L
Sbjct: 267 ELKLGANQISNISPLAGL 284
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 86.5 bits (213), Expect = 8e-19
Identities = 44/308 (14%), Positives = 104/308 (33%), Gaps = 29/308 (9%)
Query: 462 PAYRTFSLEELE-EATNNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHST-- 517
P + L + E + + +G G+ G + K G VA++ L
Sbjct: 2 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 61
Query: 518 RNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAH 577
+ + L+ ++H +++ L + + ++ L +
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND--VYLVTHLMGADLNNI----VKC 115
Query: 578 QSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637
Q LT + +G++++H+ + +LK +++ ++++ KI + L +
Sbjct: 116 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 172
Query: 638 NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQ 696
+ + + + +DI+ G I+ E++ GR L +D LK
Sbjct: 173 DEMTGYVATRWYRA-PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 231
Query: 697 LQAVVTADESARRSMVD----------PAVNKACLDESLKTMMEVCV----RCLLKNPAE 742
L+ V T + + + K + V + L+ + +
Sbjct: 232 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 291
Query: 743 RPSVEDVL 750
R + L
Sbjct: 292 RITAAQAL 299
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 84.9 bits (209), Expect = 2e-18
Identities = 45/282 (15%), Positives = 107/282 (37%), Gaps = 38/282 (13%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRL----KNGTFVAIRCLK----MKKCHSTRNFMHHIELIS 528
NF+ +G G+ G+++ R G A++ LK ++K +T + +++
Sbjct: 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 83
Query: 529 KLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISA 588
+R + L + F+ + +++ LI +Y+ G L + + + T +
Sbjct: 84 HIRQSPFLVTLHYAFQ------TETKLHLILDYINGGELFTHL---SQRERFTEHEVQIY 134
Query: 589 AIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKIS----SYNLPLLAENAEKVGH 644
+ ++ LH G+ ++K+ +ILLD N ++ S
Sbjct: 135 VGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFC 191
Query: 645 VIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTA 703
+ D ++ +D + G+++ E++ G P E + + ++ +
Sbjct: 192 GTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKS 251
Query: 704 DESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPS 745
+ + M K +++ R L+K+P +R
Sbjct: 252 EPPYPQEM----------SALAKDLIQ---RLLMKDPKKRLG 280
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 85.4 bits (210), Expect = 2e-18
Identities = 54/330 (16%), Positives = 110/330 (33%), Gaps = 48/330 (14%)
Query: 486 GEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHST--RNFMHHIELISKLRHRHLVSALGHC 542
G G+QG + VAI+ L + T + + L+ + H++++S L
Sbjct: 26 GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN-V 84
Query: 543 FECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTG 602
F ++L+ E + + L + + GI+ LH+
Sbjct: 85 FTPQKTLEEFQDVYLVMELMDANLCQVI------QMELDHERMSYLLYQMLCGIKHLHS- 137
Query: 603 IVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKL 662
G+ +LK ++I++ + KI + L A + + + P
Sbjct: 138 --AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 195
Query: 663 EEKIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQAVVTADESARRSM---------- 711
+E +DI+ G I+ E++ + L R +D ++ + T + +
Sbjct: 196 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 255
Query: 712 -----------VDPAVNKACLDESLKTMMEVCV----RCLLKNPAERPSVEDVLWNLQFA 756
+ P E K + L+ +PA+R SV+D L
Sbjct: 256 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL------ 309
Query: 757 AQVQDAWHSQSSEGSPISPPRPSRQHLSFH 786
Q + + + + + P P
Sbjct: 310 ---QHPYINVWYDPAEVEAPPPQIYDKQLD 336
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 79.8 bits (196), Expect = 1e-16
Identities = 38/284 (13%), Positives = 98/284 (34%), Gaps = 42/284 (14%)
Query: 477 NNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTR---NFMHHIELISKLRH 532
+ FD +G GS G++ + ++G A++ L +K + + ++ ++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 533 RHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGV 592
LV + ++++ EYV G + S + + A +
Sbjct: 101 PFLVKLEFSFKDNSN-------LYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQI 150
Query: 593 AKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSI 652
++LH+ + +LK ++L+DQ +++ + + + ++
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF--GFAKRVKGRTWTLCGTPEAL 205
Query: 653 DPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTADESARRSM 711
P + +D + G+++ E+ G P + + + + + + V
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----- 260
Query: 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAER-----PSVEDVL 750
LK ++ L + +R V D+
Sbjct: 261 ---------FSSDLKDLLR---NLLQVDLTKRFGNLKNGVNDIK 292
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 79.1 bits (194), Expect = 1e-16
Identities = 30/289 (10%), Positives = 71/289 (24%), Gaps = 30/289 (10%)
Query: 477 NNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHL 535
++ +GEGS G ++ G L N VAI+ + L
Sbjct: 5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTG 62
Query: 536 VSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKG 595
+ + + + L+ + + G + AA +
Sbjct: 63 IPNVYYFGQEG------LHNVLVIDLLGPSLEDLLDLCGR---KFSVKTVAMAAKQMLAR 113
Query: 596 IQFLHT-GIVPGVFS-NNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGS-- 651
+Q +H +V +N I + + + + + H+
Sbjct: 114 VQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNL 173
Query: 652 ------IDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADE 705
+ + + D+ G + + + G + K + + + +
Sbjct: 174 SGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQ 233
Query: 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754
S + E M P + +
Sbjct: 234 STPLRELCAGF-----PEEFYKYMH---YARNLAFDATPDYDYLQGLFS 274
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 77.0 bits (189), Expect = 4e-16
Identities = 40/283 (14%), Positives = 92/283 (32%), Gaps = 42/283 (14%)
Query: 477 NNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKC------HSTRNFMHHIELISK 529
+ + +G G G +Y G + + VAI+ ++ + + + L+ K
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 530 LRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAA 589
+ S + + + S LI E +L S
Sbjct: 64 VSSGF--SGVIRLLDWFERPDS---FVLILERPEPVQDLFDFI--TERGALQEELARSFF 116
Query: 590 IGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN-LVAKISSYNLPLLAENAEKVGHVIPY 648
V + ++ H GV ++K +IL+D N K+ + L ++
Sbjct: 117 WQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGT 172
Query: 649 SGSIDPTNSARGKLE-EKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESA 707
P + ++ G++L +++ G E ++++ Q+
Sbjct: 173 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-EIIRGQVFF-------- 223
Query: 708 RRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
+ + + ++ CL P++RP+ E++
Sbjct: 224 ----------RQRVSSECQHLIR---WCLALRPSDRPTFEEIQ 253
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 76.2 bits (186), Expect = 1e-15
Identities = 48/230 (20%), Positives = 84/230 (36%), Gaps = 7/230 (3%)
Query: 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENM 166
PD +L L + + G L +L L + +N ++ P + L L+ L L +N
Sbjct: 31 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ 90
Query: 167 LAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYG---EVPDFS 223
L +L L V N F+ L + V+ L N E F
Sbjct: 91 LKELPEKMPKTLQELRVH---ENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQ 147
Query: 224 GLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRF 283
G+ L + + + + + L + L NK A + L +L LS N
Sbjct: 148 GMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSI 207
Query: 284 VGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTG 333
+L + P + L++ +NKL + + + V L +N ++
Sbjct: 208 SAVDNGSLANTPHLRELHLNNNKLVKVPGGL-ADHKYIQVVYLHNNNISA 256
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 66.2 bits (160), Expect = 3e-12
Identities = 49/234 (20%), Positives = 81/234 (34%), Gaps = 33/234 (14%)
Query: 132 SLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMF 191
L ++ S L +P++L L L N + +L L L L NN
Sbjct: 11 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKI 67
Query: 192 NGTLPDSFSYLENLRVLALSNNHFYGEVPD----------------------FSGLTYLQ 229
+ P +F+ L L L LS N F+GL +
Sbjct: 68 SKISPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMI 127
Query: 230 VLDLENNALGPQFPKVG-----KKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFV 284
V++L N L + G KKL + ++ + IP + L L L N+
Sbjct: 128 VVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLPP--SLTELHLDGNKIT 184
Query: 285 GPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNC 338
+L L ++ L ++ N ++ L+ P L + L++N L
Sbjct: 185 KVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGL 238
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 62.0 bits (149), Expect = 7e-11
Identities = 44/267 (16%), Positives = 79/267 (29%), Gaps = 46/267 (17%)
Query: 75 SITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLE 134
L + NK + F L +L L L++ + G + L LE
Sbjct: 32 DTALLDLQNNKITEIKDGDFK---------NLKNLHTLILINNKISKISPGAFAPLVKLE 82
Query: 135 ILNMSSNFLNGAIPQELSILTSLQT-----------------------LILDENMLAGRV 171
L +S N L + L L+ L + +G
Sbjct: 83 RLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIE 142
Query: 172 PDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQV 230
+ L+ + + + T+P +L L L N GL L
Sbjct: 143 NGAFQGMKKLSYIRIADTNIT-TIPQGL--PPSLTELHLDGNKITKVDAASLKGLNNLAK 199
Query: 231 LDLENNA---LGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRF---- 283
L L N+ + L + L+ NK +P ++ + +Q + L +N
Sbjct: 200 LGLSFNSISAVDNGSLANTPHLRELHLNNNKLVK-VPGGLADHKYIQVVYLHNNNISAIG 258
Query: 284 --VGPFPQALLSLPSITYLNIADNKLT 308
P S + +++ N +
Sbjct: 259 SNDFCPPGYNTKKASYSGVSLFSNPVQ 285
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 42.7 bits (99), Expect = 1e-04
Identities = 17/91 (18%), Positives = 29/91 (31%)
Query: 249 LVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLT 308
+ L NK + + L L L +N+ P A L + L ++ N+L
Sbjct: 33 TALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK 92
Query: 309 GKLFDDLSCNPELGFVDLSSNLLTGQLPNCL 339
EL + + + N L
Sbjct: 93 ELPEKMPKTLQELRVHENEITKVRKSVFNGL 123
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 76.2 bits (186), Expect = 2e-15
Identities = 36/334 (10%), Positives = 93/334 (27%), Gaps = 55/334 (16%)
Query: 486 GEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
G G ++ + + N T VA++ ++ K T I+L+ ++
Sbjct: 22 GWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGAN 80
Query: 545 ------CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQF 598
+F+ + + ++ + G + + + H+ + + + G+ +
Sbjct: 81 HILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDY 140
Query: 599 LHTGIVPGVFSNNLKITDILLDQN----LVAKISSYNLPLLAENAEKVGHVIPYSGSIDP 654
+H G+ ++K ++L++ + +I +L E + I P
Sbjct: 141 MHRR--CGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSP 198
Query: 655 TNSARGKLEEKIDIYDFGLILLEIIVGRPL---KSRKEVDLLKNQLQAVVTADESARRSM 711
DI+ ++ E+I G L + + ++ +
Sbjct: 199 EVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYL 258
Query: 712 VDPAVNKACLDESLKTMMEVCV-----------------------------RCLLKNPAE 742
+ S + + L +P +
Sbjct: 259 LRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRK 318
Query: 743 RPSVEDVLWNLQFAAQVQDAWHSQSSEGSPISPP 776
R ++ W + I P
Sbjct: 319 RADAGGLV---------NHPWLKDTLGMEEIRVP 343
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 56.3 bits (135), Expect = 3e-10
Identities = 27/106 (25%), Positives = 43/106 (40%), Gaps = 2/106 (1%)
Query: 206 RVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPA 265
RVL L++ + L + LDL +N L P + +L +
Sbjct: 1 RVLHLAHKDLT-VLCHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVD 59
Query: 266 EVSSYYQLQRLDLSSNRFVG-PFPQALLSLPSITYLNIADNKLTGK 310
V++ +LQ L L +NR Q L+S P + LN+ N L +
Sbjct: 60 GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQE 105
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 50.1 bits (119), Expect = 4e-08
Identities = 29/123 (23%), Positives = 48/123 (39%), Gaps = 7/123 (5%)
Query: 183 VLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQF 242
VL L + T+ L + L LS+N P + L L+VL +NAL
Sbjct: 2 VLHLAHKDL--TVLCHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVD 59
Query: 243 PKVGKKLV-TMILSKNKFRS-AIPAEVSSYYQLQRLDLSSNRFVG--PFPQALLS-LPSI 297
+ ++L N+ + A + S +L L+L N + L LPS+
Sbjct: 60 GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSV 119
Query: 298 TYL 300
+ +
Sbjct: 120 SSI 122
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 43.2 bits (101), Expect = 1e-05
Identities = 27/106 (25%), Positives = 42/106 (39%), Gaps = 7/106 (6%)
Query: 135 ILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGT 194
+L+++ L + L L + L L N L P L +L L VL +N
Sbjct: 2 VLHLAHKDLT--VLCHLEQLLLVTHLDLSHNRLRALPPA-LAALRCLEVLQASDNALEN- 57
Query: 195 LPDSFSYLENLRVLALSNNHFYG--EVPDFSGLTYLQVLDLENNAL 238
D + L L+ L L NN + L +L+L+ N+L
Sbjct: 58 -VDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSL 102
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.0 bits (133), Expect = 5e-09
Identities = 36/181 (19%), Positives = 57/181 (31%), Gaps = 28/181 (15%)
Query: 106 LPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDEN 165
L L L L GL G L++L+ L + N L L +L L L N
Sbjct: 104 LGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGN 163
Query: 166 MLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLE---------------------- 203
++ L L L L N P +F L
Sbjct: 164 RISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAP 223
Query: 204 --NLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPK--VGKKLVTMILSKNKF 259
L+ L L++N + + +LQ ++ + P+ G+ L L+ N
Sbjct: 224 LRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSLPQRLAGRDLKR--LAANDL 281
Query: 260 R 260
+
Sbjct: 282 Q 282
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.6 bits (132), Expect = 6e-09
Identities = 46/208 (22%), Positives = 74/208 (35%), Gaps = 5/208 (2%)
Query: 131 SSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNM 190
++ + + + N ++ +L L L N+LA L +L L L +N
Sbjct: 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNA 91
Query: 191 FNGTL-PDSFSYLENLRVLALSNNHFYGEVPDFSGLTY-LQVLDLENNALG---PQFPKV 245
++ P +F L L L L P LQ L L++NAL +
Sbjct: 92 QLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRD 151
Query: 246 GKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADN 305
L + L N+ S + L RL L NR P A L + L + N
Sbjct: 152 LGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFAN 211
Query: 306 KLTGKLFDDLSCNPELGFVDLSSNLLTG 333
L+ + L+ L ++ L+ N
Sbjct: 212 NLSALPTEALAPLRALQYLRLNDNPWVC 239
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.7 bits (130), Expect = 1e-08
Identities = 31/178 (17%), Positives = 49/178 (27%), Gaps = 2/178 (1%)
Query: 131 SSLEILNMSSNFLNGAIPQELSILTSLQTLILD-ENMLAGRVPDWLGSLPILAVLSLRNN 189
IL++S N L L T L L LD + +V L L L + +
Sbjct: 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTLDLSHNQLQ 90
Query: 190 MFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKL 249
+ + G + L L + E L P KL
Sbjct: 91 SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKL 150
Query: 250 VTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKL 307
+ L+ N ++ L L L N P+ + + + N
Sbjct: 151 EKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPW 207
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.3 bits (103), Expect = 2e-05
Identities = 36/206 (17%), Positives = 67/206 (32%), Gaps = 31/206 (15%)
Query: 150 ELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLA 209
E+S + S + D+ L +P L +L L N+ + L L
Sbjct: 5 EVSKVASHLEVNCDKRNLT-ALPPDLPKD--TTILHLSENLLYTFSLATLMPYTRLTQLN 61
Query: 210 LSNNHFYGEVPDFSGLTYLQVLDLEN--------------------------NALGPQFP 243
L ++ L L LDL + +L
Sbjct: 62 LDRAELT-KLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGAL 120
Query: 244 KVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIA 303
+ +L + L N+ ++ P ++ +L++L L++N L L ++ L +
Sbjct: 121 RGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQ 180
Query: 304 DNKLTGKLFDDLSCNPELGFVDLSSN 329
+N L + + L F L N
Sbjct: 181 ENSLY-TIPKGFFGSHLLPFAFLHGN 205
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.8 bits (86), Expect = 0.004
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 137 NMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFN 192
++++N L L+ L +L TL+L EN L +P +L L N +
Sbjct: 154 SLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 53.2 bits (127), Expect = 1e-08
Identities = 15/153 (9%), Positives = 45/153 (29%), Gaps = 26/153 (16%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAI----------RCLKMKKCHSTRNFMHHIELISKLRHRH 534
MGEG + ++ + + + +K K+ + +F ++ R
Sbjct: 8 MGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRA 67
Query: 535 LVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAK 594
L G + ++ E ++ + + + +
Sbjct: 68 LQKLQGLAVPKVYA---WEGNAVLMEL--------IDAKELYRVRVENPDEV--LDMILE 114
Query: 595 GIQFLHTGIVPGVFSNNLKITDILLDQNLVAKI 627
+ + G+ +L ++L+ + + I
Sbjct: 115 EVAKFYH---RGIVHGDLSQYNVLVSEEGIWII 144
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 49.8 bits (117), Expect = 7e-07
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 9/78 (11%)
Query: 130 LSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNN 189
SLE LN+S+N L +P ++ L+ LI N L VP+ + L L + N
Sbjct: 283 PPSLEELNVSNNKLI-ELP---ALPPRLERLIASFNHL-AEVPELPQN---LKQLHVEYN 334
Query: 190 MFNGTLPDSFSYLENLRV 207
PD +E+LR+
Sbjct: 335 PLR-EFPDIPESVEDLRM 351
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 47.5 bits (111), Expect = 4e-06
Identities = 20/95 (21%), Positives = 37/95 (38%), Gaps = 8/95 (8%)
Query: 186 LRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKV 245
N + + +L L +SNN E+P + L+ L N L + P++
Sbjct: 267 YYLNASSNEIRSLCDLPPSLEELNVSNNKL-IELP--ALPPRLERLIASFNHLA-EVPEL 322
Query: 246 GKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSS 280
+ L + + N R P S ++ L ++S
Sbjct: 323 PQNLKQLHVEYNPLRE-FPDIPES---VEDLRMNS 353
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 44.4 bits (103), Expect = 4e-05
Identities = 17/94 (18%), Positives = 30/94 (31%), Gaps = 8/94 (8%)
Query: 137 NMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLP 196
N + I + SL+ L + N L +P L L N +P
Sbjct: 266 LYYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPALPPR---LERLIASFNHLA-EVP 320
Query: 197 DSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQV 230
+ +NL+ L + N + L++
Sbjct: 321 EL---PQNLKQLHVEYNPLREFPDIPESVEDLRM 351
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 40.2 bits (92), Expect = 6e-04
Identities = 15/69 (21%), Positives = 25/69 (36%), Gaps = 8/69 (11%)
Query: 241 QFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYL 300
+ L + +S NK +PA L+RL S N P+ ++ L
Sbjct: 278 SLCDLPPSLEELNVSNNKLIE-LPALPPR---LERLIASFNHLAE-VPE---LPQNLKQL 329
Query: 301 NIADNKLTG 309
++ N L
Sbjct: 330 HVEYNPLRE 338
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 37.9 bits (86), Expect = 0.004
Identities = 11/58 (18%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Query: 204 NLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRS 261
L L+N +P+ +L+ L N+L + P++ + L ++++ N ++
Sbjct: 39 QAHELELNNLGL-SSLPEL--PPHLESLVASCNSLT-ELPELPQSLKSLLVDNNNLKA 92
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.7 bits (110), Expect = 2e-06
Identities = 33/162 (20%), Positives = 49/162 (30%), Gaps = 28/162 (17%)
Query: 147 IPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLR 206
+ +S LD L R L + I VL+ R++M TL + L
Sbjct: 12 LKLIMSKRYDGSQQALDLKGL--RSDPDLVAQNIDVVLNRRSSMAA-TLRIIEENIPELL 68
Query: 207 VLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAE 266
L LSNN Y S + L + LS N+ +S +
Sbjct: 69 SLNLSNNRLYRLDDMSSIVQKA------------------PNLKILNLSGNELKSERELD 110
Query: 267 VSSYYQLQRLDLSSNRFVGPFPQA-------LLSLPSITYLN 301
+L+ L L N F P + L+
Sbjct: 111 KIKGLKLEELWLDGNSLSDTFRDQSTYISAIRERFPKLLRLD 152
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.7 bits (84), Expect = 0.003
Identities = 23/126 (18%), Positives = 42/126 (33%), Gaps = 5/126 (3%)
Query: 195 LPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENN--ALGPQFPKVGKKLVTM 252
L S + AL PD VL+ ++ A + +L+++
Sbjct: 12 LKLIMSKRYDGSQQALDLKGLR-SDPDLVAQNIDVVLNRRSSMAATLRIIEENIPELLSL 70
Query: 253 ILSKNKFR--SAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGK 310
LS N+ + + V L+ L+LS N + + L + N L+
Sbjct: 71 NLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDT 130
Query: 311 LFDDLS 316
D +
Sbjct: 131 FRDQST 136
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.2 bits (113), Expect = 2e-06
Identities = 40/246 (16%), Positives = 77/246 (31%), Gaps = 19/246 (7%)
Query: 109 LKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNG-AIPQELSILTSLQTLILDENML 167
+ R + PL+ S ++ +++S++ + + LS + LQ L L+ L
Sbjct: 25 VIAFRCPRSFMDQPLAEHFS-PFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRL 83
Query: 168 AGRVPDWLGSLPILAVLSLRN--NMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGL 225
+ + + L L L+L L S L L LS + E +
Sbjct: 84 SDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAV 143
Query: 226 TYLQVLDLENNALG-----------PQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQ 274
++ + N G + + + ++ E LQ
Sbjct: 144 AHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQ 203
Query: 275 RLDLSSNRFVGP-FPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTG 333
L LS + P L +P++ L + G L P L ++ + T
Sbjct: 204 HLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPHL---QINCSHFTT 260
Query: 334 QLPNCL 339
+
Sbjct: 261 IARPTI 266
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.2 bits (100), Expect = 6e-05
Identities = 21/96 (21%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Query: 229 QVLDLENNALGPQFPK--VGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGP 286
Q LDL L P + + ++ ++ F AE S +++Q +DLS++
Sbjct: 3 QTLDLTGKNLHPDVTGRLLSQGVIAFRCPRS-FMDQPLAEHFSPFRVQHMDLSNSVIEVS 61
Query: 287 FPQALLS-LPSITYLNIADNKLTGKLFDDLSCNPEL 321
+LS + L++ +L+ + + L+ N L
Sbjct: 62 TLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNL 97
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.7 bits (91), Expect = 0.001
Identities = 14/81 (17%), Positives = 28/81 (34%), Gaps = 2/81 (2%)
Query: 274 QRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTG 333
Q LDL+ LLS + + + L + S + +DLS++++
Sbjct: 3 QTLDLTGKNLHPDVTGRLLSQ-GVIAFRCPRSFMDQPLAEHFSP-FRVQHMDLSNSVIEV 60
Query: 334 QLPNCLLAGSKNRVVLYARNC 354
+ +L+ L
Sbjct: 61 STLHGILSQCSKLQNLSLEGL 81
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.5 bits (88), Expect = 0.002
Identities = 17/99 (17%), Positives = 34/99 (34%), Gaps = 3/99 (3%)
Query: 206 RVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGK--KLVTMILSKNKF-RSA 262
+ L L+ + + +V + + + + ++ M LS + S
Sbjct: 3 QTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVST 62
Query: 263 IPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLN 301
+ +S +LQ L L R P L ++ LN
Sbjct: 63 LHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 101
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.0 bits (112), Expect = 3e-06
Identities = 19/78 (24%), Positives = 31/78 (39%), Gaps = 5/78 (6%)
Query: 273 LQRLDLSSNRFV-GPFPQALLSLPSITYLNIADNKLTGK----LFDDLSCNPELGFVDLS 327
+Q LD+ + + L L + + D LT + L NP L ++L
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 328 SNLLTGQLPNCLLAGSKN 345
SN L +C+L G +
Sbjct: 64 SNELGDVGVHCVLQGLQT 81
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.1 bits (107), Expect = 1e-05
Identities = 16/97 (16%), Positives = 33/97 (34%), Gaps = 9/97 (9%)
Query: 259 FRSAIPAEVSSYYQLQRLDLSSNRF----VGPFPQALLSLPSITYLNIADNKLTGK---- 310
R L+ L L+ LL+ S+ L++++N L
Sbjct: 357 VRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQ 416
Query: 311 LFDDLSCNP-ELGFVDLSSNLLTGQLPNCLLAGSKNR 346
L + + L + L + ++ + L A K++
Sbjct: 417 LVESVRQPGCLLEQLVLYDIYWSEEMEDRLQALEKDK 453
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.4 bits (100), Expect = 8e-05
Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 13/104 (12%)
Query: 118 GLWGPLSGKISRLSSLEILNMSSNFLNG----AIPQELSILTSLQTLILDENMLAGRVPD 173
G+ G S L +L ++ ++ ++ L SL+ L L N L
Sbjct: 356 GVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGIL 415
Query: 174 WLGS-----LPILAVLSLRNNMFNGTLPDSFSYLE----NLRVL 208
L +L L L + ++ + D LE +LRV+
Sbjct: 416 QLVESVRQPGCLLEQLVLYDIYWSEEMEDRLQALEKDKPSLRVI 459
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.4 bits (100), Expect = 9e-05
Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 10/95 (10%)
Query: 132 SLEILNMSSNFLNGA-IPQELSILTSLQTLILDENML----AGRVPDWLGSLPILAVLSL 186
++ L++ L+ A + L +L Q + LD+ L + L P LA L+L
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 187 RNNMFNGTLPDSF-----SYLENLRVLALSNNHFY 216
R+N + ++ L+L N
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLT 97
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.7 bits (98), Expect = 1e-04
Identities = 14/91 (15%), Positives = 32/91 (35%), Gaps = 10/91 (10%)
Query: 249 LVTMILSKNKFRSAIPAEVSSY-YQLQRLDLSSNRF----VGPFPQALLSLPSITYLNIA 303
+ ++ + + A AE+ Q Q + L AL P++ LN+
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 304 DNKLTGKLFDDL-----SCNPELGFVDLSSN 329
N+L + + + ++ + L +
Sbjct: 64 SNELGDVGVHCVLQGLQTPSCKIQKLSLQNC 94
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.5 bits (95), Expect = 4e-04
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 13/90 (14%)
Query: 109 LKVLRLVSLGL----WGPLSGKISRLSSLEILNMSSNFLNGAIPQELS-----ILTSLQT 159
L+VL L + L+ + SL L++S+N L A +L L+
Sbjct: 371 LRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQ 430
Query: 160 LILDENMLAGRVPDWLGSL----PILAVLS 185
L+L + + + D L +L P L V+S
Sbjct: 431 LVLYDIYWSEEMEDRLQALEKDKPSLRVIS 460
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.7 bits (93), Expect = 6e-04
Identities = 15/84 (17%), Positives = 24/84 (28%), Gaps = 10/84 (11%)
Query: 172 PDWLGSLPILAVLSLRNNMFNGT----LPDSFSYLENLRVLALSNNHFYGEVPD------ 221
+L VL L + + + L + +LR L LSNN
Sbjct: 362 QGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESV 421
Query: 222 FSGLTYLQVLDLENNALGPQFPKV 245
L+ L L + +
Sbjct: 422 RQPGCLLEQLVLYDIYWSEEMEDR 445
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.3 bits (92), Expect = 7e-04
Identities = 10/70 (14%), Positives = 21/70 (30%), Gaps = 6/70 (8%)
Query: 181 LAVLSLRNNMFNGT-LPDSFSYLENLRVLALSNNHFYGEVPD-----FSGLTYLQVLDLE 234
+ L ++ + + L+ +V+ L + L L+L
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 235 NNALGPQFPK 244
+N LG
Sbjct: 64 SNELGDVGVH 73
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 43.5 bits (101), Expect = 4e-05
Identities = 31/199 (15%), Positives = 60/199 (30%), Gaps = 12/199 (6%)
Query: 130 LSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNN 189
+ N+ + A+ Q L S+ +I + + + + LP + L L N
Sbjct: 23 FAETIKDNLKKKSVTDAVTQNE--LNSIDQIIANNSDIKSVQG--IQYLPNVTKLFLNGN 78
Query: 190 MFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKL 249
+ L+NL L L N + N +L
Sbjct: 79 KLTD--IKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQL 136
Query: 250 VTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTG 309
++ L NK + L+ + + P L + L ++ N ++
Sbjct: 137 ESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVPLAG----LTKLQNLYLSKNHISD 192
Query: 310 KLFDDLSCNPELGFVDLSS 328
L+ L ++L S
Sbjct: 193 --LRALAGLKNLDVLELFS 209
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 192 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 41.3 bits (95), Expect = 2e-04
Identities = 20/97 (20%), Positives = 36/97 (37%)
Query: 172 PDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVL 231
L L L+L +N + +P SF +L +L L L++N F +L+
Sbjct: 95 NKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKK 154
Query: 232 DLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVS 268
L A P + + L ++F+ +
Sbjct: 155 SLNGGAARCGAPSKVRDVQIKDLPHSEFKCSSENSEG 191
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 41.6 bits (96), Expect = 2e-04
Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 3/64 (4%)
Query: 172 PDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVL 231
L +L L L +N + P + L NL + L NN V + + L ++
Sbjct: 166 LTPLANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISD-VSPLANTSNLFIV 222
Query: 232 DLEN 235
L N
Sbjct: 223 TLTN 226
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 40.0 bits (92), Expect = 6e-04
Identities = 33/224 (14%), Positives = 75/224 (33%), Gaps = 15/224 (6%)
Query: 107 PDLKVLRLVSLGLWGP-LSGKISR--LSSLEILNMSSNFLNGAIPQELSILTSLQTLILD 163
PD + + + ++ +++ L + L+ + + + L +L L L
Sbjct: 14 PDPALANAIKIAAGKSNVTDTVTQADLDGITTLSAFGTGVTTI--EGVQYLNNLIGLELK 71
Query: 164 ENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFS 223
+N + L +L + L L N + L + + S
Sbjct: 72 DNQI--TDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLS 129
Query: 224 GLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRF 283
L L + + + LS + + +++ +L L N+
Sbjct: 130 NLQVLYLDLNQIT----NISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKI 185
Query: 284 VGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLS 327
P L SLP++ +++ +N+++ L+ L V L+
Sbjct: 186 SDISP--LASLPNLIEVHLKNNQISD--VSPLANTSNLFIVTLT 225
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 37.7 bits (86), Expect = 0.003
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 127 ISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186
++ LS L L N ++ P L+ L +L + L N ++ P L + L +++L
Sbjct: 169 LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTL 224
Query: 187 RN 188
N
Sbjct: 225 TN 226
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.2 bits (90), Expect = 5e-04
Identities = 20/131 (15%), Positives = 41/131 (31%), Gaps = 9/131 (6%)
Query: 178 LPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNA 237
L LR + + + L+ + S+N ++ F L L+ L + NN
Sbjct: 17 AVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR-KLDGFPLLRRLKTLLVNNNR 74
Query: 238 ---LGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFP----QA 290
+G + L +IL+ N + + + V
Sbjct: 75 ICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYV 134
Query: 291 LLSLPSITYLN 301
+ +P + L+
Sbjct: 135 IYKVPQVRVLD 145
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.2 bits (85), Expect = 0.003
Identities = 13/87 (14%), Positives = 29/87 (33%), Gaps = 1/87 (1%)
Query: 198 SFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVG-KKLVTMILSK 256
++ R L L + L +D +N + ++L T++++
Sbjct: 13 QYTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNN 72
Query: 257 NKFRSAIPAEVSSYYQLQRLDLSSNRF 283
N+ + L L L++N
Sbjct: 73 NRICRIGEGLDQALPDLTELILTNNSL 99
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.0 bits (86), Expect = 0.003
Identities = 12/78 (15%), Positives = 21/78 (26%), Gaps = 1/78 (1%)
Query: 160 LILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEV 219
L L++N + + + NN D F +L +S +
Sbjct: 158 LWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLP 217
Query: 220 PD-FSGLTYLQVLDLENN 236
L L+ N
Sbjct: 218 SYGLENLKKLRARSTYNL 235
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 786 | |||
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 99.97 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.92 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.91 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.9 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.89 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.89 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.88 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.87 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.85 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.84 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.75 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.75 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.75 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.75 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.73 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.71 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.71 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.7 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 99.7 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.69 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.69 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 99.59 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.48 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.48 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 99.45 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.44 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.43 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 99.43 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 99.43 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 99.36 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 99.34 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 99.33 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.27 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.25 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.25 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.19 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.31 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.13 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 97.88 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 97.43 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 97.23 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 97.13 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 96.44 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 96.05 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 95.88 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 95.85 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 94.19 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 93.23 |
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-50 Score=419.04 Aligned_cols=252 Identities=19% Similarity=0.361 Sum_probs=198.4
Q ss_pred cCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~ 556 (786)
++|+..+.||+|+||+||+|++++++.||||+++... ...++|.+|++++++++|||||+++|+|.. .+..+
T Consensus 5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-------~~~~~ 76 (263)
T d1sm2a_ 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLE-------QAPIC 76 (263)
T ss_dssp SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-------SSSCE
T ss_pred HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCc-CcHHHHHHHHHHHHhcCCCCcccccceecc-------CCceE
Confidence 4677889999999999999999888999999997543 456789999999999999999999999875 35689
Q ss_pred EEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccc
Q 003926 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636 (786)
Q Consensus 557 LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~ 636 (786)
+|||||++|+|.+++... ...++|..++.++.|+|+||+|||+. +|+||||||+|||+|+++.+||+|||+++..
T Consensus 77 lv~E~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qia~gl~~lH~~---~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~ 151 (263)
T d1sm2a_ 77 LVFEFMEHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFV 151 (263)
T ss_dssp EEEECCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCTTCSGGGEEECGGGCEEECSCC-----
T ss_pred EEEEecCCCcHHHHhhcc--ccCCCHHHHHHHHHHHHHHHHhhhcc---ceeecccchhheeecCCCCeEecccchheec
Confidence 999999999999998764 34689999999999999999999997 9999999999999999999999999999765
Q ss_pred ccccc--cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccccccccc
Q 003926 637 ENAEK--VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMVD 713 (786)
Q Consensus 637 ~~~~~--~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 713 (786)
..... .....++..|+|||.+....|+.|+|||||||++|||+| |++|+.......+...+.. .. ....
T Consensus 152 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~---~~-----~~~~ 223 (263)
T d1sm2a_ 152 LDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST---GF-----RLYK 223 (263)
T ss_dssp -------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHH---TC-----CCCC
T ss_pred cCCCceeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHh---cC-----CCCC
Confidence 43322 223456778999999999999999999999999999999 5666665544433332221 11 1111
Q ss_pred ccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 714 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
| ..++ .++.+++.+||+.||++||||+||+++|+..
T Consensus 224 p---~~~~----~~l~~li~~cl~~~p~~Rps~~~il~~L~~i 259 (263)
T d1sm2a_ 224 P---RLAS----THVYQIMNHCWKERPEDRPAFSRLLRQLAEI 259 (263)
T ss_dssp C---TTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred c---cccC----HHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence 1 1222 3567888999999999999999999998744
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-50 Score=421.76 Aligned_cols=256 Identities=20% Similarity=0.344 Sum_probs=200.1
Q ss_pred hcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
.++|...+.||+|+||+||+|+++. .||||+++.... ...+.|.+|+++|++++|||||+++|++.+ +
T Consensus 7 ~~~~~~~~~lG~G~fg~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~--------~ 76 (276)
T d1uwha_ 7 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA--------P 76 (276)
T ss_dssp TTCCCCCSEEEECSSCEEEEEESSS--EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS--------S
T ss_pred cccEEEEEEEeeCCCcEEEEEEECC--EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec--------c
Confidence 4678889999999999999998753 599999975532 335789999999999999999999998753 3
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++|||||++|+|.++++..+ ..++|..++.++.|+|+||+|||+. +||||||||+|||+|.++.+||+|||++
T Consensus 77 ~~~lv~Ey~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~gl~yLH~~---~ivHrDlKp~NiLl~~~~~~Kl~DFGla 151 (276)
T d1uwha_ 77 QLAIVTQWCEGSSLYHHLHIIE--TKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLA 151 (276)
T ss_dssp SCEEEEECCCEEEHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTSSEEECCCCCS
T ss_pred EEEEEEecCCCCCHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHhcC---CEeccccCHHHEEEcCCCCEEEccccce
Confidence 5799999999999999997543 3699999999999999999999997 9999999999999999999999999999
Q ss_pred ccccccc---ccccccccccccCcccccc---CCCCcccceeehhHHHHHHHhCCCCCCCchh-HHHHHHHHHHHHhccc
Q 003926 634 LLAENAE---KVGHVIPYSGSIDPTNSAR---GKLEEKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVVTADES 706 (786)
Q Consensus 634 ~~~~~~~---~~~~~~~~~~~~aPe~~~~---~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~-~~~~~~~~~~~~~~~~ 706 (786)
+...... ......++..|+|||.+.. +.|+.|+|||||||++|||+||+.||..... ..+...+.. ..
T Consensus 152 ~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~---~~-- 226 (276)
T d1uwha_ 152 TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR---GY-- 226 (276)
T ss_dssp CC------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHH---TS--
T ss_pred eeccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhc---CC--
Confidence 7654322 2234567889999998753 3589999999999999999999999976432 222222211 00
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.... -+.....++ ..+.+++.+||+.||++||||+||+++|+..+
T Consensus 227 -~~p~-~~~~~~~~~----~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~ 271 (276)
T d1uwha_ 227 -LSPD-LSKVRSNCP----KAMKRLMAECLKKKRDERPLFPQILASIELLA 271 (276)
T ss_dssp -CCCC-GGGSCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -CCCc-chhccccch----HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 0000 011122232 35678888999999999999999999998554
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=3.5e-50 Score=423.00 Aligned_cols=253 Identities=21% Similarity=0.371 Sum_probs=193.2
Q ss_pred CCCccCccCCCCCceeEEEEec-CC---cEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK-NG---TFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~-~g---~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
+|+..+.||+|+||+||+|+.+ +| ..||||++..... ...++|.+|+++|++++|||||+++|+|.. .
T Consensus 27 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~-------~ 99 (299)
T d1jpaa_ 27 CVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTK-------S 99 (299)
T ss_dssp GEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-------S
T ss_pred hcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEee-------C
Confidence 3455689999999999999975 23 3689999875433 234679999999999999999999999865 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..++|||||++|+|.+++.... ..++|.+++.++.|+|+||+|||+. +||||||||+|||+|.++++||+|||+
T Consensus 100 ~~~~iv~Ey~~~g~L~~~~~~~~--~~l~~~~~~~i~~qia~gl~yLH~~---~iiHrDlKp~NILl~~~~~~Kl~DFGl 174 (299)
T d1jpaa_ 100 TPVMIITEFMENGSLDSFLRQND--GQFTVIQLVGMLRGIAAGMKYLADM---NYVHRDLAARNILVNSNLVCKVSDFGL 174 (299)
T ss_dssp SSCEEEEECCTTEEHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC--
T ss_pred CEEEEEEEecCCCcceeeecccc--CCCCHHHHHHHHHHHHHHHHHHhhC---CCccCccccceEEECCCCcEEECCccc
Confidence 56899999999999999987632 3699999999999999999999997 999999999999999999999999999
Q ss_pred cccccccccc------ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcc
Q 003926 633 PLLAENAEKV------GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADE 705 (786)
Q Consensus 633 ~~~~~~~~~~------~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 705 (786)
++........ ....++..|+|||.+..+.|+.++|||||||++|||+| |++||.......+...+.. ..
T Consensus 175 a~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~---~~- 250 (299)
T d1jpaa_ 175 SRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQ---DY- 250 (299)
T ss_dssp ---------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT---TC-
T ss_pred ceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHc---CC-
Confidence 9765432211 12235678999999999999999999999999999998 8999976654443332211 10
Q ss_pred ccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 706 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
+ +..+..+ ...+.+++.+||+.||++||||+||+++|+...
T Consensus 251 ---~----~~~~~~~----~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l 291 (299)
T d1jpaa_ 251 ---R----LPPPMDC----PSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMI 291 (299)
T ss_dssp ---C----CCCCTTC----CHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred ---C----CCCCccc----hHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 0 1111122 235678889999999999999999999997443
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-50 Score=420.32 Aligned_cols=252 Identities=22% Similarity=0.369 Sum_probs=203.3
Q ss_pred HhcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
..++|+..+.||+|+||+||+|++++++.||||+++... ...++|.+|+++|++++|||||+++|+|.+ +.
T Consensus 11 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~--------~~ 81 (272)
T d1qpca_ 11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ--------EP 81 (272)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS--------SS
T ss_pred CHHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeecc--------CC
Confidence 345678889999999999999999888999999997543 456789999999999999999999998753 34
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++|||||++|+|.+++.... ...++|..++.|+.|||+||.|||+. +|+||||||+|||+|+++.+||+|||+++
T Consensus 82 ~~iv~Ey~~~g~L~~~~~~~~-~~~l~~~~~~~i~~qi~~gl~~lH~~---~ivHrDiKp~NIll~~~~~~Kl~DFGla~ 157 (272)
T d1qpca_ 82 IYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLAR 157 (272)
T ss_dssp CEEEEECCTTCBHHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred eEEEEEeCCCCcHHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccchhheeeecccceeeccccceE
Confidence 799999999999999886432 23589999999999999999999997 99999999999999999999999999997
Q ss_pred cccccc--ccccccccccccCccccccCCCCcccceeehhHHHHHHHhC-CCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 635 LAENAE--KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVG-RPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 635 ~~~~~~--~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
...... ......++..|+|||.+..+.|+.|+|||||||++|||+|| ++|+.......+...+.. .
T Consensus 158 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~----~------- 226 (272)
T d1qpca_ 158 LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER----G------- 226 (272)
T ss_dssp ECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT----T-------
T ss_pred EccCCccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHh----c-------
Confidence 664332 22234567789999999888999999999999999999995 555555444333222211 0
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
..+..+..++ ..+.+++.+||+.||++||||+||++.|+
T Consensus 227 ~~~~~p~~~~----~~l~~li~~cl~~~P~~Rpt~~ei~~~L~ 265 (272)
T d1qpca_ 227 YRMVRPDNCP----EELYQLMRLCWKERPEDRPTFDYLRSVLE 265 (272)
T ss_dssp CCCCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCcccCh----HHHHHHHHHHcCCCHhHCcCHHHHHHHhh
Confidence 1111112223 35678889999999999999999998774
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.1e-50 Score=412.03 Aligned_cols=251 Identities=20% Similarity=0.349 Sum_probs=209.2
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|+..+.||+|+||+||+|+.+ +|+.||||++.... ....+.+.+|++++++++|||||++++++.+ .
T Consensus 6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-------~ 78 (263)
T d2j4za1 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHD-------A 78 (263)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-------S
T ss_pred hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEE-------C
Confidence 46888999999999999999975 68999999987432 3446789999999999999999999999875 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..|+|||||++|+|.+++... ..+++.....++.|+++||+|||+. +||||||||+|||++.++.+||+|||+
T Consensus 79 ~~~~ivmEy~~~g~L~~~l~~~---~~l~e~~~~~i~~qi~~al~~lH~~---~ivHrDiKp~Nill~~~~~~kl~DFG~ 152 (263)
T d2j4za1 79 TRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGW 152 (263)
T ss_dssp SEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCS
T ss_pred CEEEEEEeecCCCcHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeeeeccccceecCCCCEeecccce
Confidence 5789999999999999999753 3589999999999999999999997 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
++...... .....|+..|+|||.+.+..|+.++|||||||++|||+||++||...........+. ...
T Consensus 153 a~~~~~~~-~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~---~~~-------- 220 (263)
T d2j4za1 153 SVHAPSSR-RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS---RVE-------- 220 (263)
T ss_dssp CSCCCCCC-CEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH---TTC--------
T ss_pred eeecCCCc-ccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHH---cCC--------
Confidence 97654332 334568889999999998889999999999999999999999998765544332221 110
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
+..+... ..++.+++.+||+.||++|||++||++|+|+..
T Consensus 221 -~~~p~~~----s~~~~~li~~~L~~dp~~R~t~~eil~hp~~~~ 260 (263)
T d2j4za1 221 -FTFPDFV----TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 260 (263)
T ss_dssp -CCCCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHH
T ss_pred -CCCCccC----CHHHHHHHHHHccCCHhHCcCHHHHHcCcCcCC
Confidence 1111112 235667888999999999999999999999875
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-49 Score=416.07 Aligned_cols=253 Identities=18% Similarity=0.304 Sum_probs=209.0
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
+.|+..+.||+|+||+||+|+. .+|+.||||+++.......+.+.+|+++|++++|||||++++++.+ .+..
T Consensus 20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~-------~~~~ 92 (293)
T d1yhwa1 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV-------GDEL 92 (293)
T ss_dssp TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEE-------TTEE
T ss_pred cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEE-------CCEE
Confidence 4688899999999999999995 5799999999987766667889999999999999999999999875 4578
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
|+|||||++|+|.+++.+. .+++.+...++.|++.||+|||+. +||||||||+|||++.++.+||+|||+++.
T Consensus 93 ~ivmEy~~gg~L~~~~~~~----~l~~~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~~~~~vkl~DFG~a~~ 165 (293)
T d1yhwa1 93 WVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQ 165 (293)
T ss_dssp EEEEECCTTCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEecCCCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCcHHHeEECCCCcEeeccchhhee
Confidence 9999999999999988752 589999999999999999999997 999999999999999999999999999976
Q ss_pred cccc-cccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccc
Q 003926 636 AENA-EKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDP 714 (786)
Q Consensus 636 ~~~~-~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 714 (786)
.... .......|+..|+|||.+.+..|+.++|||||||++|||+||++||...........+ .... ....
T Consensus 166 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~---~~~~---~~~~--- 236 (293)
T d1yhwa1 166 ITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI---ATNG---TPEL--- 236 (293)
T ss_dssp CCSTTCCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH---HHHC---SCCC---
T ss_pred eccccccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHH---HhCC---CCCC---
Confidence 5432 2334556889999999999888999999999999999999999999765433221111 1111 0011
Q ss_pred cccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 715 AVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 715 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
.... .....+.+++.+||+.||++|||+.|+++|+||.
T Consensus 237 ~~~~----~~s~~~~~li~~~L~~dP~~R~s~~eil~Hp~~~ 274 (293)
T d1yhwa1 237 QNPE----KLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLK 274 (293)
T ss_dssp SSGG----GSCHHHHHHHHHHTCSSTTTSCCHHHHTTCGGGG
T ss_pred CCcc----cCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhC
Confidence 1111 1223566888899999999999999999998874
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.9e-49 Score=405.59 Aligned_cols=250 Identities=21% Similarity=0.330 Sum_probs=207.3
Q ss_pred cCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~ 556 (786)
++|+..+.||+|+||+||+|++++++.||||+++... ...++|.+|++++++++|||||+++|+|.+ .+..+
T Consensus 4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~-~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~-------~~~~~ 75 (258)
T d1k2pa_ 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK-------QRPIF 75 (258)
T ss_dssp CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSS-SCHHHHHHHHHHHHTCCCTTBCCEEEEECC-------SSSEE
T ss_pred HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCc-CCHHHHHHHHHHHHhcCCCceeeEEEEEee-------CCceE
Confidence 5788999999999999999999889999999998654 346789999999999999999999999875 35689
Q ss_pred EEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccc
Q 003926 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636 (786)
Q Consensus 557 LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~ 636 (786)
+||||+++|+|.+++... ...+++..+.+++.|+|+||+|||+. +|+||||||+||++|+++.+||+|||+++..
T Consensus 76 iv~Ey~~~g~l~~~~~~~--~~~~~~~~~~~i~~qi~~gl~~LH~~---~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~ 150 (258)
T d1k2pa_ 76 IITEYMANGCLLNYLREM--RHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYV 150 (258)
T ss_dssp EEEECCTTEEHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHT---TBCCSCCSGGGEEECTTCCEEECCCSSCCBC
T ss_pred EEEEccCCCcHHHhhhcc--ccCCcHHHHHHHHHHHHHHHHHHhhc---CcccccccceeEEEcCCCcEEECcchhheec
Confidence 999999999999997653 24689999999999999999999997 9999999999999999999999999999655
Q ss_pred ccccc--cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccccccccc
Q 003926 637 ENAEK--VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMVD 713 (786)
Q Consensus 637 ~~~~~--~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 713 (786)
..... .....++..|+|||.+....|+.|+|||||||++|||+| |+.||.......+...+.. . .....
T Consensus 151 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~----~----~~~~~ 222 (258)
T d1k2pa_ 151 LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ----G----LRLYR 222 (258)
T ss_dssp SSSSCCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHT----T----CCCCC
T ss_pred cCCCceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHh----C----CCCCC
Confidence 43322 223456778999999999999999999999999999998 8999987655444332211 1 01111
Q ss_pred ccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 714 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
| ..++ ..+.+++.+||+.||++||||+||++||.
T Consensus 223 p---~~~~----~~l~~li~~cl~~dP~~RPt~~eil~~L~ 256 (258)
T d1k2pa_ 223 P---HLAS----EKVYTIMYSCWHEKADERPTFKILLSNIL 256 (258)
T ss_dssp C---TTCC----HHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred c---cccc----HHHHHHHHHHccCCHhHCcCHHHHHHHhh
Confidence 1 1222 35678889999999999999999999984
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=7.8e-50 Score=417.80 Aligned_cols=254 Identities=20% Similarity=0.355 Sum_probs=205.6
Q ss_pred HHhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 474 EATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 474 ~~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
...++|+..+.||+|+||+||+|+.+ +|+.||||+++... ...++|.+|+++|++++|||||+++|+|.+ .
T Consensus 14 i~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~-------~ 85 (287)
T d1opja_ 14 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTR-------E 85 (287)
T ss_dssp CCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-------S
T ss_pred ecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEee-------C
Confidence 34567888899999999999999975 58999999997543 456789999999999999999999999875 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..++|||||++|+|.+++.... ...++|..++.++.|+|+||+|||+. +|+||||||+|||+|+++.+||+|||+
T Consensus 86 ~~~~iv~E~~~~g~l~~~l~~~~-~~~~~~~~~~~i~~qi~~gL~yLH~~---~iiHrDlKp~NILl~~~~~~Kl~DFG~ 161 (287)
T d1opja_ 86 PPFYIITEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGL 161 (287)
T ss_dssp SSCEEEEECCTTCBHHHHHHHSC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCC
T ss_pred CeeEEEeecccCcchHHHhhhcc-ccchHHHHHHHHHHHHHHHHHHHHHC---CcccCccccCeEEECCCCcEEEccccc
Confidence 56899999999999999997542 35799999999999999999999997 999999999999999999999999999
Q ss_pred ccccccccc--cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCC-CCCchhHHHHHHHHHHHHhcccccc
Q 003926 633 PLLAENAEK--VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 633 ~~~~~~~~~--~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p-~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
++....... .....++..|+|||.+..+.|+.|+|||||||++|||++|..| +...+...+...+.. .
T Consensus 162 a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~----~----- 232 (287)
T d1opja_ 162 SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK----D----- 232 (287)
T ss_dssp TTTCCSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHT----T-----
T ss_pred eeecCCCCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhc----C-----
Confidence 976643322 2234467789999999999999999999999999999996554 544444433322211 1
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
..+..+..++ ..+.+++.+||+.||++||||+||++.|+
T Consensus 233 --~~~~~~~~~~----~~l~~li~~cl~~dP~~Rps~~ei~~~L~ 271 (287)
T d1opja_ 233 --YRMERPEGCP----EKVYELMRACWQWNPSDRPSFAEIHQAFE 271 (287)
T ss_dssp --CCCCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --CCCCCCccch----HHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 0111122222 35678889999999999999999998775
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.1e-50 Score=416.32 Aligned_cols=256 Identities=19% Similarity=0.303 Sum_probs=201.9
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
.++|+..+.||+|+||+||+|+.+ +|+.||||+++.... ...+.|.+|+++|++++|||||++++++.+ .+
T Consensus 4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~-------~~ 76 (271)
T d1nvra_ 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE-------GN 76 (271)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEE-------TT
T ss_pred CcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeecc-------Cc
Confidence 357888999999999999999964 699999999976543 234679999999999999999999999876 46
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..|+|||||++|+|.+++... ..+++.....++.|+++||+|||+. +|+||||||+|||+++++.+||+|||++
T Consensus 77 ~~~ivmEy~~gg~L~~~l~~~---~~l~e~~~~~i~~qi~~al~ylH~~---~IiHrDiKp~NILl~~~~~~KL~DFG~a 150 (271)
T d1nvra_ 77 IQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLA 150 (271)
T ss_dssp EEEEEEECCTTEEGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTC
T ss_pred eeEEEEeccCCCcHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHc---CCccCcccHHHEEECCCCCEEEccchhh
Confidence 789999999999999999753 3699999999999999999999997 9999999999999999999999999999
Q ss_pred ccccccc---ccccccccccccCccccccCCC-CcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 634 LLAENAE---KVGHVIPYSGSIDPTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 634 ~~~~~~~---~~~~~~~~~~~~aPe~~~~~~~-t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
+...... ......||..|+|||.+....+ +.++||||+||++|||+||++||........... .. ... .
T Consensus 151 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~--~~-~~~----~ 223 (271)
T d1nvra_ 151 TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DW-KEK----K 223 (271)
T ss_dssp EECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHH--HH-HTT----C
T ss_pred eeeccCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHH--HH-hcC----C
Confidence 7654322 2334568899999999877765 6789999999999999999999965432211110 00 000 0
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
....+ . .....++.+++.+||+.||++|||++|+++|+||.+
T Consensus 224 ~~~~~--~----~~~s~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~ 265 (271)
T d1nvra_ 224 TYLNP--W----KKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 265 (271)
T ss_dssp TTSTT--G----GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTC
T ss_pred CCCCc--c----ccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCc
Confidence 00000 0 111234567888999999999999999999888754
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-49 Score=416.28 Aligned_cols=255 Identities=15% Similarity=0.285 Sum_probs=206.6
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
+.|+..+.||+|+||+||+|+.+ +|+.||||+++.......+.|.+|+++|++++|||||++++++.+ .+..
T Consensus 12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~-------~~~~ 84 (288)
T d2jfla1 12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYY-------ENNL 84 (288)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEE-------TTEE
T ss_pred cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee-------CCeE
Confidence 45788899999999999999964 699999999987665666889999999999999999999999875 4578
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
++|||||++|+|.+++.+. ...+++.+...++.|+++||.|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 85 ~lvmEy~~~g~L~~~~~~~--~~~l~e~~~~~i~~qi~~gL~ylH~~---~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~ 159 (288)
T d2jfla1 85 WILIEFCAGGAVDAVMLEL--ERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAK 159 (288)
T ss_dssp EEEEECCTTEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEecCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CEEEeecChhheeECCCCCEEEEechhhhc
Confidence 9999999999999998653 23699999999999999999999998 999999999999999999999999999865
Q ss_pred cccc-cccccccccccccCccccc-----cCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 636 AENA-EKVGHVIPYSGSIDPTNSA-----RGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 636 ~~~~-~~~~~~~~~~~~~aPe~~~-----~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
.... .......|+..|+|||.+. ...|+.|+|||||||++|||+||++||...........+. ... ..
T Consensus 160 ~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~---~~~---~~ 233 (288)
T d2jfla1 160 NTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIA---KSE---PP 233 (288)
T ss_dssp CHHHHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHH---HSC---CC
T ss_pred cCCCcccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHH---cCC---CC
Confidence 4322 2233456888999999873 4558999999999999999999999997655433322211 111 00
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
.... +.....++.+++.+||+.||++|||+.|+++|+|+.
T Consensus 234 ~~~~-------~~~~s~~~~~li~~~L~~dp~~R~t~~ell~hp~~~ 273 (288)
T d2jfla1 234 TLAQ-------PSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVT 273 (288)
T ss_dssp CCSS-------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGC
T ss_pred CCCc-------cccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccC
Confidence 1111 111223567888899999999999999999988764
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.1e-50 Score=416.50 Aligned_cols=258 Identities=19% Similarity=0.299 Sum_probs=196.1
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
++|+..+.||+|+||+||+|+.+ +|+.||||+++..... ..+.|.+|+++|++++|||||++++++.+ ...+
T Consensus 4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~-----~~~~ 78 (269)
T d2java1 4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIID-----RTNT 78 (269)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC---------
T ss_pred hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEe-----CCCC
Confidence 57889999999999999999864 7999999999765432 24569999999999999999999998864 1234
Q ss_pred eEEEEEecCCCCChhHHhhcC-CCCCCCCHHHHHHHHHHHHHHhhhhhcCC--CCCccccCCCCCceeecCCCcccccCC
Q 003926 554 RIFLIFEYVPNGTLRSWISEG-HAHQSLTWTQRISAAIGVAKGIQFLHTGI--VPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~ia~~ia~gL~yLH~~~--~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
..|+|||||++|+|.+++.+. .....+++.....++.|++.||+|||+.. ..+||||||||+|||++.++.+||+||
T Consensus 79 ~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DF 158 (269)
T d2java1 79 TLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDF 158 (269)
T ss_dssp CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCH
T ss_pred EEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeec
Confidence 689999999999999998642 12346999999999999999999999741 125999999999999999999999999
Q ss_pred Cccccccccc-ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 631 NLPLLAENAE-KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 631 Gl~~~~~~~~-~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
|+++...... ......++..|+|||.+....|+.|+|||||||++|||+||++||.......+...+.. .. .
T Consensus 159 G~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~---~~---~- 231 (269)
T d2java1 159 GLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE---GK---F- 231 (269)
T ss_dssp HHHHHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH---TC---C-
T ss_pred cceeecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHc---CC---C-
Confidence 9997654332 23345678899999999888999999999999999999999999987655443322211 11 1
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
+.++..++ .++.+++.+||+.||++|||+.|+++|+|
T Consensus 232 ----~~~~~~~s----~~l~~li~~~L~~dp~~Rps~~ell~hp~ 268 (269)
T d2java1 232 ----RRIPYRYS----DELNEIITRMLNLKDYHRPSVEEILENPL 268 (269)
T ss_dssp ----CCCCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred ----CCCCcccC----HHHHHHHHHHcCCChhHCcCHHHHHhCCc
Confidence 11111222 34667888999999999999999999876
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-49 Score=420.34 Aligned_cols=266 Identities=16% Similarity=0.294 Sum_probs=206.6
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
.++|+..+.||+|+||+||+|+. .+|+.||||+++..... ..+.+.+|+++|++++|||||+++++|.+ .+
T Consensus 5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~-------~~ 77 (322)
T d1s9ja_ 5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-------DG 77 (322)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEEC-------SS
T ss_pred ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-------CC
Confidence 46788999999999999999996 47999999999765333 34679999999999999999999999875 45
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhc-CCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHT-GIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~-~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
..|+|||||++|+|.+++.+. ..+++.....++.|+++||.|||+ + +|+||||||+|||++.++.+||+|||+
T Consensus 78 ~~~iVmEy~~gg~L~~~l~~~---~~l~~~~~~~~~~qil~aL~yLH~~~---~IiHRDiKP~NILl~~~~~vkl~DFGl 151 (322)
T d1s9ja_ 78 EISICMEHMDGGSLDQVLKKA---GRIPEQILGKVSIAVIKGLTYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGV 151 (322)
T ss_dssp EEEEEEECCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHHH---CCCCSCCSGGGEEECTTCCEEECCCCC
T ss_pred EEEEEEEcCCCCcHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHhC---CEEccccCHHHeeECCCCCEEEeeCCC
Confidence 799999999999999999753 358999999999999999999996 4 799999999999999999999999999
Q ss_pred ccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccc-----
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESA----- 707 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~----- 707 (786)
|+...... .....||..|+|||.+.+..|+.++||||+||++|||+||+.||...+..................
T Consensus 152 a~~~~~~~-~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (322)
T d1s9ja_ 152 SGQLIDSM-ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRP 230 (322)
T ss_dssp CHHHHHHT-C---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC---------------
T ss_pred ccccCCCc-cccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccc
Confidence 97554322 234578899999999999999999999999999999999999996543322111100000000000
Q ss_pred -------cc-------------------ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 708 -------RR-------------------SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 708 -------~~-------------------~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
.. ....+...... ...++.+++.+||+.||++|||++|+++|+|+.+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~~ 304 (322)
T d1s9ja_ 231 RTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGV---FSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 304 (322)
T ss_dssp ---------------CCCCHHHHHHHHHTSCCCCCCBTT---BCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHH
T ss_pred ccccccccccccccccchhHHHHHhhhhccCCccCcccc---CCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCcC
Confidence 00 00001111111 12356788889999999999999999999999764
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.7e-49 Score=410.23 Aligned_cols=249 Identities=17% Similarity=0.270 Sum_probs=199.6
Q ss_pred CCCccC-ccCCCCCceeEEEEec---CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 478 NFDTSA-FMGEGSQGQMYRGRLK---NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 478 ~f~~~~-~iG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
+|...+ .||+|+||+||+|+++ ++..||||+++.... ...++|.+|+++|++++|||||+++|+|..
T Consensus 9 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-------- 80 (285)
T d1u59a_ 9 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-------- 80 (285)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES--------
T ss_pred CeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc--------
Confidence 444555 4999999999999864 456899999975543 234679999999999999999999998853
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..|+|||||++|+|.+++... ...+++..+..++.|+|+||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 81 ~~~~lvmE~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~gL~ylH~~---~iiHrDlKp~Nill~~~~~~Kl~DFGl 155 (285)
T d1u59a_ 81 EALMLVMEMAGGGPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGL 155 (285)
T ss_dssp SSEEEEEECCTTEEHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTT
T ss_pred CeEEEEEEeCCCCcHHHHhhcc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCcCchhheeeccCCceeeccchh
Confidence 3479999999999999998653 24699999999999999999999997 999999999999999999999999999
Q ss_pred ccccccccc----cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccc
Q 003926 633 PLLAENAEK----VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESA 707 (786)
Q Consensus 633 ~~~~~~~~~----~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (786)
++....... .....++..|+|||.+..+.++.|+|||||||++|||+| |++||.......+...+.. . .
T Consensus 156 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~----~--~ 229 (285)
T d1u59a_ 156 SKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ----G--K 229 (285)
T ss_dssp CEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHT----T--C
T ss_pred hhcccccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHc----C--C
Confidence 976543221 123346678999999988899999999999999999998 8999986554443322211 1 0
Q ss_pred ccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 708 RRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 708 ~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
.+..+..++ .++.+++.+||+.||++||||.+|+++|+
T Consensus 230 -----~~~~p~~~~----~~l~~li~~cl~~~p~~RPs~~~i~~~L~ 267 (285)
T d1u59a_ 230 -----RMECPPECP----PELYALMSDCWIYKWEDRPDFLTVEQRMR 267 (285)
T ss_dssp -----CCCCCTTCC----HHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred -----CCCCCCcCC----HHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 111222233 35678889999999999999999988775
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-48 Score=405.01 Aligned_cols=256 Identities=20% Similarity=0.349 Sum_probs=196.9
Q ss_pred cCCCccCccCCCCCceeEEEEecCC-----cEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKNG-----TFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~g-----~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
+.|+..++||+|+||+||+|.+++. ..||||+++..... ...+|.+|++++++++|||||+++|+|.+
T Consensus 7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~------ 80 (283)
T d1mqba_ 7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISK------ 80 (283)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS------
T ss_pred HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEec------
Confidence 4577789999999999999997632 47999999754432 24579999999999999999999999875
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
.+..++|||||.+|++.+++... ...++|.+++.++.|+|+||+|||+. +|+||||||+|||+|.++.+||+||
T Consensus 81 -~~~~~~v~e~~~~~~l~~~~~~~--~~~~~~~~~~~i~~~i~~gl~~lH~~---~iiHrDlKp~NILl~~~~~~Kl~DF 154 (283)
T d1mqba_ 81 -YKPMMIITEYMENGALDKFLREK--DGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDF 154 (283)
T ss_dssp -SSSEEEEEECCTTEEHHHHHHHT--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC
T ss_pred -CCceEEEEEecccCcchhhhhcc--cccccHHHHHHHHHHHHHhhhhcccc---ccccCccccceEEECCCCeEEEccc
Confidence 45689999999999999988754 24699999999999999999999997 9999999999999999999999999
Q ss_pred Ccccccccccc----cccccccccccCccccccCCCCcccceeehhHHHHHHHhCC-CCCCCchhHHHHHHHHHHHHhcc
Q 003926 631 NLPLLAENAEK----VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTADE 705 (786)
Q Consensus 631 Gl~~~~~~~~~----~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~-~p~~~~~~~~~~~~~~~~~~~~~ 705 (786)
|+++....... .....++..|+|||.+..+.|+.|+|||||||++|||+||. +|+.......+...+. ..
T Consensus 155 Gla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~----~~- 229 (283)
T d1mqba_ 155 GLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIN----DG- 229 (283)
T ss_dssp CC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH----TT-
T ss_pred chhhcccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHh----cc-
Confidence 99976543221 12234677899999999999999999999999999999965 5554444333322221 11
Q ss_pred ccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 003926 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQV 759 (786)
Q Consensus 706 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~ 759 (786)
..+..+..++ ..+.+++.+||+.||++||||.||++.|+...+.
T Consensus 230 ------~~~~~~~~~~----~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~ 273 (283)
T d1mqba_ 230 ------FRLPTPMDCP----SAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 273 (283)
T ss_dssp ------CCCCCCTTCB----HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred ------CCCCCchhhH----HHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhC
Confidence 0111122233 3567888999999999999999999988754443
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.2e-48 Score=412.35 Aligned_cols=256 Identities=20% Similarity=0.291 Sum_probs=192.5
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
.+.|+..+.||+|+||+||+|+.+ +|+.||||++..... ...+.|.+|+++|++++|||||++++++.+ .+
T Consensus 8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~-------~~ 80 (307)
T d1a06a_ 8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYES-------GG 80 (307)
T ss_dssp GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEEC-------SS
T ss_pred ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-------CC
Confidence 355888999999999999999965 689999999976543 234568899999999999999999998865 46
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeec---CCCcccccCC
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD---QNLVAKISSY 630 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld---~~~~~kl~Df 630 (786)
..|+|||||++|+|.+++... ..+++.....++.|++.||+|||+. +||||||||+|||+. +++.+||+||
T Consensus 81 ~~~lvmE~~~gg~L~~~l~~~---~~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~Nil~~~~~~~~~vkl~DF 154 (307)
T d1a06a_ 81 HLYLIMQLVSGGELFDRIVEK---GFYTERDASRLIFQVLDAVKYLHDL---GIVHRDLKPENLLYYSLDEDSKIMISDF 154 (307)
T ss_dssp EEEEEECCCCSCBHHHHHHTC---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCC
T ss_pred EEEEEEeccCCCcHHHhhhcc---cCCCHHHHHHHHHHHHHHHHhhhhc---eeeeEEecccceeecccCCCceEEEecc
Confidence 789999999999999999763 4699999999999999999999997 999999999999994 5789999999
Q ss_pred CcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 631 NLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 631 Gl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
|+++............||..|+|||.+....|+.++|||||||++|||+||++||...........+. .... .
T Consensus 155 G~a~~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~---~~~~----~ 227 (307)
T d1a06a_ 155 GLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQIL---KAEY----E 227 (307)
T ss_dssp ------------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH---TTCC----C
T ss_pred ceeEEccCCCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHh---ccCC----C
Confidence 99987665555555678999999999998899999999999999999999999998765443322221 1110 0
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
.+.... ......+.+++.+||++||++|||+.|+++|+|+.
T Consensus 228 -~~~~~~----~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~ 268 (307)
T d1a06a_ 228 -FDSPYW----DDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIA 268 (307)
T ss_dssp -CCTTTT----TTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTT
T ss_pred -CCCccc----cCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhC
Confidence 111111 11223567888999999999999999999999875
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-48 Score=403.36 Aligned_cols=253 Identities=23% Similarity=0.333 Sum_probs=198.8
Q ss_pred CccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEE
Q 003926 480 DTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (786)
Q Consensus 480 ~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~ 556 (786)
+..+.||+|+||+||+|+.. +++.||||++...... ..+.|.+|+++|++++|||||+++|++.... ......|
T Consensus 12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~---~~~~~~~ 88 (270)
T d1t4ha_ 12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV---KGKKCIV 88 (270)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEES---SSCEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeecc---ccCCEEE
Confidence 34567999999999999965 6899999998765432 2467999999999999999999999986421 2245689
Q ss_pred EEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeec-CCCcccccCCCcccc
Q 003926 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD-QNLVAKISSYNLPLL 635 (786)
Q Consensus 557 LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld-~~~~~kl~DfGl~~~ 635 (786)
+|||||++|+|.+++.+. ..+++.....++.|+++||+|||+. .++|+||||||+|||++ +++.+||+|||+++.
T Consensus 89 ivmE~~~~g~L~~~l~~~---~~~~~~~~~~~~~qi~~gl~yLH~~-~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~ 164 (270)
T d1t4ha_ 89 LVTELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 164 (270)
T ss_dssp EEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EEEeCCCCCcHHHHHhcc---ccccHHHHHHHHHHHHHHHHHHHHC-CCCEEeCCcChhhceeeCCCCCEEEeecCccee
Confidence 999999999999999763 3689999999999999999999986 23499999999999996 578999999999976
Q ss_pred cccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCch-hHHHHHHHHHHHHhccccccccccc
Q 003926 636 AENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVVTADESARRSMVDP 714 (786)
Q Consensus 636 ~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~ 714 (786)
.... ......||..|+|||.+. +.|+.++|||||||++|||+||+.||.... ...+...+. . . ...+
T Consensus 165 ~~~~-~~~~~~GT~~Y~aPE~~~-~~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~---~-~------~~~~ 232 (270)
T d1t4ha_ 165 KRAS-FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVT---S-G------VKPA 232 (270)
T ss_dssp CCTT-SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHT---T-T------CCCG
T ss_pred ccCC-ccCCcccCccccCHHHhC-CCCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHH---c-C------CCCc
Confidence 5433 233457889999999875 569999999999999999999999996533 222222111 1 0 0011
Q ss_pred cccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 715 AVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 715 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
....... .++.+++.+||++||++|||+.|+++|+||
T Consensus 233 ~~~~~~~----~~~~~li~~~l~~dp~~R~s~~ell~Hp~f 269 (270)
T d1t4ha_ 233 SFDKVAI----PEVKEIIEGCIRQNKDERYSIKDLLNHAFF 269 (270)
T ss_dssp GGGGCCC----HHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred ccCccCC----HHHHHHHHHHccCCHhHCcCHHHHhCCccc
Confidence 1111222 246678889999999999999999999886
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-48 Score=404.98 Aligned_cols=243 Identities=19% Similarity=0.300 Sum_probs=193.0
Q ss_pred CccCCCCCceeEEEEec---CCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEE
Q 003926 483 AFMGEGSQGQMYRGRLK---NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFL 557 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~L 557 (786)
+.||+|+||+||+|.++ .++.||||+++..... ..++|.+|+++|++++|||||+++|+|.. +..+|
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~--------~~~~l 84 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA--------ESWML 84 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES--------SSEEE
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc--------CCEEE
Confidence 46999999999999864 3568999999754332 24679999999999999999999998853 34789
Q ss_pred EEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccc
Q 003926 558 IFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637 (786)
Q Consensus 558 V~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~ 637 (786)
|||||++|+|.++++.. ..++|..++.++.|+|+||+|||+. +||||||||+|||++.++.+||+|||+++...
T Consensus 85 vmE~~~~g~L~~~l~~~---~~l~~~~~~~i~~qi~~gl~ylH~~---~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~ 158 (277)
T d1xbba_ 85 VMEMAELGPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALR 158 (277)
T ss_dssp EEECCTTEEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEcCCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHhhHHhC---CcccCCCcchhhcccccCcccccchhhhhhcc
Confidence 99999999999999863 3699999999999999999999997 99999999999999999999999999997653
Q ss_pred cccc----cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 638 NAEK----VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 638 ~~~~----~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
.... .....++..|+|||.+..+.|+.++|||||||++|||+| |++||.......+...+.. . ..
T Consensus 159 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~----~--~~---- 228 (277)
T d1xbba_ 159 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK----G--ER---- 228 (277)
T ss_dssp TTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT----T--CC----
T ss_pred ccccccccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHc----C--CC----
Confidence 3221 123356778999999988899999999999999999998 8999987654443332221 1 00
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
+..+..++ ..+.+++.+||+.||++||||+||++.|.
T Consensus 229 -~~~p~~~~----~~~~~li~~cl~~dp~~RPs~~~i~~~L~ 265 (277)
T d1xbba_ 229 -MGCPAGCP----REMYDLMNLCWTYDVENRPGFAAVELRLR 265 (277)
T ss_dssp -CCCCTTCC----HHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred -CCCCcccC----HHHHHHHHHHcCCCHhHCcCHHHHHHHhh
Confidence 11122233 35668889999999999999999976553
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=2.4e-48 Score=417.10 Aligned_cols=258 Identities=16% Similarity=0.235 Sum_probs=212.1
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
.++|+..+.||+|+||+||+|+.+ +|+.||||++........+.+.+|+++|++++|||||++++++.+ .+.
T Consensus 25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~-------~~~ 97 (350)
T d1koaa2 25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFED-------DNE 97 (350)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEE-------TTE
T ss_pred ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEE-------CCE
Confidence 357889999999999999999964 799999999976654456779999999999999999999999875 467
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeec--CCCcccccCCCc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD--QNLVAKISSYNL 632 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld--~~~~~kl~DfGl 632 (786)
.|+|||||++|+|.+++.+. ...+++.....++.|++.||.|||+. +||||||||+|||++ .++.+||+|||+
T Consensus 98 ~~ivmE~~~gg~L~~~l~~~--~~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHrDiKp~NIll~~~~~~~vkL~DFG~ 172 (350)
T d1koaa2 98 MVMIYEFMSGGELFEKVADE--HNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGL 172 (350)
T ss_dssp EEEEECCCCSCBHHHHHTCT--TSCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTSCCEEECCCTT
T ss_pred EEEEEEcCCCCCHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhc---CCeeeeechhHeeeccCCCCeEEEeecch
Confidence 99999999999999999653 24699999999999999999999998 999999999999995 467899999999
Q ss_pred ccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
++............+|..|+|||.+.+..|+.++||||+||++|||+||++||...........+. .... . .
T Consensus 173 a~~~~~~~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~---~~~~----~-~ 244 (350)
T d1koaa2 173 TAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVK---SCDW----N-M 244 (350)
T ss_dssp CEECCTTSCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---HTCC----C-S
T ss_pred heecccccccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHH---hCCC----C-C
Confidence 987665555556778999999999998899999999999999999999999998665443322221 1110 0 1
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
++.... .....+.+++.+||+.||++|||++|+++|+|+..
T Consensus 245 ~~~~~~----~~s~~~~~li~~~L~~dP~~R~t~~eil~hp~~~~ 285 (350)
T d1koaa2 245 DDSAFS----GISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTP 285 (350)
T ss_dssp CCGGGG----GCCHHHHHHHHHHCCSSGGGSCCHHHHHHSTTTSC
T ss_pred Cccccc----CCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCC
Confidence 111111 11235668888999999999999999999998753
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-48 Score=405.62 Aligned_cols=251 Identities=23% Similarity=0.389 Sum_probs=198.1
Q ss_pred hcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
.++|+..+.||+|+||+||+|+.++++.||||+++... ...++|.+|+.+|++++|||||+++|+|.+ +..
T Consensus 16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~--------~~~ 86 (285)
T d1fmka3 16 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE--------EPI 86 (285)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS--------SSC
T ss_pred HHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECccc-CCHHHHHHHHHHHHhcccCCEeEEEEEEec--------CCe
Confidence 35688899999999999999999888899999997543 456789999999999999999999998853 347
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
++|||||++|+|..++.... ...++|.+++.++.|||+||+|||+. +|+||||||+|||+|.++++||+|||+++.
T Consensus 87 ~lv~Ey~~~g~l~~~~~~~~-~~~l~~~~~~~i~~~i~~gl~~LH~~---~ivH~DlKp~NIll~~~~~~kl~DfGla~~ 162 (285)
T d1fmka3 87 YIVTEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARL 162 (285)
T ss_dssp EEEECCCTTCBHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC-
T ss_pred EEEEEecCCCchhhhhhhcc-cccchHHHHHHHHHHHHHHHHHHhhh---heecccccceEEEECCCCcEEEcccchhhh
Confidence 99999999999999887532 23599999999999999999999997 999999999999999999999999999976
Q ss_pred ccccc--ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCC-CCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 636 AENAE--KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 636 ~~~~~--~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
..... ......++..|+|||.+..+.++.|+|||||||++|||+||. +|+...........+.. . .
T Consensus 163 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~---~----~---- 231 (285)
T d1fmka3 163 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER---G----Y---- 231 (285)
T ss_dssp -------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT---T----C----
T ss_pred ccCCCceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHh---c----C----
Confidence 53322 222345678899999999999999999999999999999965 55554443333322211 1 0
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
.+.....++ .++.+++.+||+.||++||||+||++.++
T Consensus 232 ~~~~~~~~~----~~l~~li~~cl~~dP~~Rps~~~i~~~L~ 269 (285)
T d1fmka3 232 RMPCPPECP----ESLHDLMCQCWRKEPEERPTFEYLQAFLE 269 (285)
T ss_dssp CCCCCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCcccC----HHHHHHHHHHcccCHhHCcCHHHHHHHHh
Confidence 111122222 35678889999999999999999997764
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-48 Score=407.89 Aligned_cols=255 Identities=17% Similarity=0.254 Sum_probs=208.8
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCC------CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC------HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDD 549 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~------~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~ 549 (786)
+.|+..+.||+|+||+||+|+. .+|+.||||+++.... ...+.|.+|+++|++++|||||++++++.+
T Consensus 10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~----- 84 (293)
T d1jksa_ 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN----- 84 (293)
T ss_dssp GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----
T ss_pred cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-----
Confidence 4688899999999999999996 4799999999975432 135789999999999999999999999875
Q ss_pred CCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC----cc
Q 003926 550 SSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL----VA 625 (786)
Q Consensus 550 ~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~----~~ 625 (786)
.+..|+|||||++|+|.+++.+. ..+++.....++.|++.||+|||+. +||||||||+|||++.++ .+
T Consensus 85 --~~~~~iv~E~~~gg~L~~~i~~~---~~l~~~~~~~~~~qi~~al~yLH~~---~ivHrDiKp~Nill~~~~~~~~~v 156 (293)
T d1jksa_ 85 --KTDVILILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRI 156 (293)
T ss_dssp --SSEEEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCSSSSSCCE
T ss_pred --CCEEEEEEEcCCCccccchhccc---cccchhHHHHHHHHHHHHHHhhhhc---ceeecccccceEEEecCCCcccce
Confidence 46789999999999999999763 3699999999999999999999998 999999999999999876 48
Q ss_pred cccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcc
Q 003926 626 KISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADE 705 (786)
Q Consensus 626 kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 705 (786)
|++|||+++............++..|+|||.+....|+.++|||||||++|||+||++||...........+.. ..
T Consensus 157 kl~DfG~a~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~---~~- 232 (293)
T d1jksa_ 157 KIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSA---VN- 232 (293)
T ss_dssp EECCCTTCEECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHT---TC-
T ss_pred EecchhhhhhcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHh---cC-
Confidence 99999999776655555556778899999999888899999999999999999999999987654433222211 10
Q ss_pred ccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 706 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
.. ..+..... ....+.+++.+||+.||++|||++|+++|+|+.
T Consensus 233 ---~~-~~~~~~~~----~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~ 275 (293)
T d1jksa_ 233 ---YE-FEDEYFSN----TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275 (293)
T ss_dssp ---CC-CCHHHHTT----SCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTC
T ss_pred ---CC-CCchhcCC----CCHHHHHHHHHHccCChhHCcCHHHHhcCcccC
Confidence 00 01111111 123566888999999999999999999999875
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=5.1e-48 Score=407.51 Aligned_cols=250 Identities=18% Similarity=0.301 Sum_probs=201.8
Q ss_pred CCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCC---hHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 478 NFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHS---TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~---~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
.|+..+.||+|+||+||+|+. .+|+.||||+++...... .+.|.+|+++|++++|||||+++|++.+ .+
T Consensus 16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~-------~~ 88 (309)
T d1u5ra_ 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-------EH 88 (309)
T ss_dssp HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-------TT
T ss_pred hcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEE-------CC
Confidence 477889999999999999995 478999999997654322 3568999999999999999999999875 45
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..|+|||||++|+|..++... ..+++.++..++.|++.||.|||+. +||||||||+|||++.++.+||+|||++
T Consensus 89 ~~~iv~E~~~~g~l~~~~~~~---~~l~e~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~~~~~~Kl~DFG~a 162 (309)
T d1u5ra_ 89 TAWLVMEYCLGSASDLLEVHK---KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSA 162 (309)
T ss_dssp EEEEEEECCSEEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTC
T ss_pred EEEEEEEecCCCchHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEECCCCCEEEeecccc
Confidence 789999999999998776643 3699999999999999999999997 9999999999999999999999999999
Q ss_pred cccccccccccccccccccCcccccc---CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 634 LLAENAEKVGHVIPYSGSIDPTNSAR---GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~aPe~~~~---~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
+..... ....||..|+|||.+.. +.|+.++|||||||++|||++|++||.......... ...... ...
T Consensus 163 ~~~~~~---~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~---~i~~~~---~~~ 233 (309)
T d1u5ra_ 163 SIMAPA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY---HIAQNE---SPA 233 (309)
T ss_dssp BSSSSB---CCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH---HHHHSC---CCC
T ss_pred cccCCC---CccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHH---HHHhCC---CCC
Confidence 755432 34568889999998753 468999999999999999999999987654322211 111111 111
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
..+ ..++ ..+.+++.+||+.||++|||+.|+++|+|+.+
T Consensus 234 ~~~----~~~s----~~~~~li~~~L~~dP~~Rpt~~ell~Hp~~~~ 272 (309)
T d1u5ra_ 234 LQS----GHWS----EYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR 272 (309)
T ss_dssp CSC----TTSC----HHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHS
T ss_pred CCC----CCCC----HHHHHHHHHHCcCChhHCcCHHHHHhCHHhcC
Confidence 111 1122 35667888999999999999999999999763
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=4e-48 Score=415.60 Aligned_cols=256 Identities=16% Similarity=0.211 Sum_probs=210.9
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
++|+..+.||+|+||+||+|+. .+|+.||||+++.......+.+.+|+++|++++|||||++++++.+ .+..
T Consensus 29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~-------~~~~ 101 (352)
T d1koba_ 29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFED-------KYEM 101 (352)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEEC-------SSEE
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-------CCEE
Confidence 4688899999999999999996 4799999999976554445678999999999999999999998865 4678
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeec--CCCcccccCCCcc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD--QNLVAKISSYNLP 633 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld--~~~~~kl~DfGl~ 633 (786)
|+|||||++|+|.+++... ...+++.+...++.|++.||+|||+. +||||||||+|||++ .++.+||+|||++
T Consensus 102 ~ivmE~~~gg~L~~~~~~~--~~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHRDiKp~NILl~~~~~~~vkL~DFGla 176 (352)
T d1koba_ 102 VLILEFLSGGELFDRIAAE--DYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLA 176 (352)
T ss_dssp EEEEECCCCCBHHHHTTCT--TCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTC
T ss_pred EEEEEcCCCChHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccccccccccccCCCeEEEeecccc
Confidence 9999999999999987653 24699999999999999999999997 999999999999998 6789999999999
Q ss_pred cccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccccc
Q 003926 634 LLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVD 713 (786)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 713 (786)
+............++..|+|||.+....|+.++||||+||++|||+||++||...........+.. ... . ..
T Consensus 177 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~---~~~-~----~~ 248 (352)
T d1koba_ 177 TKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKR---CDW-E----FD 248 (352)
T ss_dssp EECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHH---CCC-C----CC
T ss_pred eecCCCCceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh---CCC-C----CC
Confidence 877655555566788899999999988999999999999999999999999987654433222211 110 0 01
Q ss_pred ccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 714 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
+.. .......+.+++.+||+.||++|||+.|+++|+|+.
T Consensus 249 ~~~----~~~~s~~~~~li~~~L~~dp~~R~s~~eil~Hp~~~ 287 (352)
T d1koba_ 249 EDA----FSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLK 287 (352)
T ss_dssp SST----TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTS
T ss_pred ccc----ccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhC
Confidence 111 111223567888999999999999999999999874
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.7e-48 Score=412.16 Aligned_cols=255 Identities=22% Similarity=0.354 Sum_probs=201.2
Q ss_pred HhcCCCccCccCCCCCceeEEEEecC-C-----cEEEEEEecccC-CCChHHHHHHHHHHhcC-CCCCcceeeeeeeecc
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLKN-G-----TFVAIRCLKMKK-CHSTRNFMHHIELISKL-RHRHLVSALGHCFECY 546 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~~-g-----~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~ 546 (786)
..++|+..+.||+|+||+||+|+... + ..||||.+.... ......|.+|+.+|+++ +|||||+++|+|.+
T Consensus 35 ~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~-- 112 (325)
T d1rjba_ 35 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL-- 112 (325)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECS--
T ss_pred CHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEee--
Confidence 34678889999999999999998642 2 369999987543 23456899999999998 89999999999875
Q ss_pred ccCCCCceEEEEEecCCCCChhHHhhcCCC--------------------CCCCCHHHHHHHHHHHHHHhhhhhcCCCCC
Q 003926 547 FDDSSVSRIFLIFEYVPNGTLRSWISEGHA--------------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPG 606 (786)
Q Consensus 547 ~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~--------------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ 606 (786)
.+..++|||||++|+|.++|+.... ...++|..++.++.|+++||+|||+. +
T Consensus 113 -----~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~---~ 184 (325)
T d1rjba_ 113 -----SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---S 184 (325)
T ss_dssp -----SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred -----CCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---C
Confidence 4568999999999999999975421 13589999999999999999999997 9
Q ss_pred ccccCCCCCceeecCCCcccccCCCcccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CC
Q 003926 607 VFSNNLKITDILLDQNLVAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GR 682 (786)
Q Consensus 607 ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~ 682 (786)
||||||||+|||++.++.+||+|||+++....... .....++..|+|||.+..+.|+.++|||||||++|||+| |+
T Consensus 185 IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~ 264 (325)
T d1rjba_ 185 CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGV 264 (325)
T ss_dssp EEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSC
T ss_pred eeeccCchhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCC
Confidence 99999999999999999999999999976543332 223456788999999999999999999999999999998 89
Q ss_pred CCCCCchhH-HHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 683 PLKSRKEVD-LLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 683 ~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
+||...... .+...+. .. ..+..+..++ ..+.+++.+||+.||++||||+||+++|.
T Consensus 265 ~Pf~~~~~~~~~~~~~~----~~-------~~~~~p~~~~----~~l~~li~~cl~~dP~~RPt~~ei~~~L~ 322 (325)
T d1rjba_ 265 NPYPGIPVDANFYKLIQ----NG-------FKMDQPFYAT----EEIYIIMQSCWAFDSRKRPSFPNLTSFLG 322 (325)
T ss_dssp CSSTTCCCSHHHHHHHH----TT-------CCCCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHh----cC-------CCCCCCCcCC----HHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence 999764432 2222221 11 0111112222 35678889999999999999999999984
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.6e-48 Score=404.43 Aligned_cols=251 Identities=16% Similarity=0.260 Sum_probs=203.7
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|+..+.||+|+||+||+|+. .+|+.||||+++... ....+.|.+|+++|++++|||||++++++.+ .
T Consensus 8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~-------~ 80 (288)
T d1uu3a_ 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQD-------D 80 (288)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEEC-------S
T ss_pred CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEE-------C
Confidence 4688899999999999999996 479999999997532 3445789999999999999999999998865 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..|+|||||++|+|.+++... ..+++.....++.|++.||+|||+. +||||||||+|||+++++.+||+|||+
T Consensus 81 ~~~~ivmEy~~gg~L~~~~~~~---~~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~NIll~~~~~vkl~DFG~ 154 (288)
T d1uu3a_ 81 EKLYFGLSYAKNGELLKYIRKI---GSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGT 154 (288)
T ss_dssp SEEEEEECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEEccCCCCHHHhhhcc---CCCCHHHHHHHHHHHHHHHHhhccc---cEEcCcCCccccccCCCceEEeccccc
Confidence 6789999999999999998753 3689999999999999999999997 999999999999999999999999999
Q ss_pred cccccccc---ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 633 PLLAENAE---KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 633 ~~~~~~~~---~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
++...... ......||..|+|||.+.+..|+.++||||+||++|||+||++||...+...+...+. ...
T Consensus 155 a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~---~~~----- 226 (288)
T d1uu3a_ 155 AKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII---KLE----- 226 (288)
T ss_dssp CEECC----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---TTC-----
T ss_pred ceecccCCcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHH---cCC-----
Confidence 97654322 2234568899999999998899999999999999999999999998765444332221 111
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
..++... ..++.+++.+||+.||++|||++|++.+.+..
T Consensus 227 ----~~~p~~~----s~~~~~li~~~L~~dP~~R~t~~e~~~~~~i~ 265 (288)
T d1uu3a_ 227 ----YDFPEKF----FPKARDLVEKLLVLDATKRLGCEEMEGYGPLK 265 (288)
T ss_dssp ----CCCCTTC----CHHHHHHHHTTSCSSGGGSTTSGGGTCHHHHH
T ss_pred ----CCCCccC----CHHHHHHHHHHccCCHhHCcCHHHHcCCHHHH
Confidence 1111112 23566888899999999999999976665543
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=5.9e-48 Score=407.23 Aligned_cols=260 Identities=22% Similarity=0.340 Sum_probs=207.5
Q ss_pred HHHHHHhcCCCccCccCCCCCceeEEEEec------CCcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeee
Q 003926 470 EELEEATNNFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHC 542 (786)
Q Consensus 470 ~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~ 542 (786)
.+++.+.++|+..+.||+|+||+||+|+.+ +++.||||+++..... ..++|.+|+++|++++|||||+++|+|
T Consensus 6 ~~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~ 85 (301)
T d1lufa_ 6 LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC 85 (301)
T ss_dssp HHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred hhccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeee
Confidence 445567788999999999999999999864 3578999999765433 246799999999999999999999998
Q ss_pred eeccccCCCCceEEEEEecCCCCChhHHhhcCC---------------------CCCCCCHHHHHHHHHHHHHHhhhhhc
Q 003926 543 FECYFDDSSVSRIFLIFEYVPNGTLRSWISEGH---------------------AHQSLTWTQRISAAIGVAKGIQFLHT 601 (786)
Q Consensus 543 ~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~---------------------~~~~l~~~~~~~ia~~ia~gL~yLH~ 601 (786)
.. .+..++||||+++|+|.+++.... ....++|..++.|+.|+|+||+|||+
T Consensus 86 ~~-------~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~ 158 (301)
T d1lufa_ 86 AV-------GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE 158 (301)
T ss_dssp CS-------SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cc-------CCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhccc
Confidence 65 356899999999999999996421 12358999999999999999999999
Q ss_pred CCCCCccccCCCCCceeecCCCcccccCCCccccccccc---ccccccccccccCccccccCCCCcccceeehhHHHHHH
Q 003926 602 GIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEI 678 (786)
Q Consensus 602 ~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~---~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~El 678 (786)
. +||||||||+|||+|.++++||+|||+++...... ......++..|+|||.+....||.|+|||||||++|||
T Consensus 159 ~---~ivHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~el 235 (301)
T d1lufa_ 159 R---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI 235 (301)
T ss_dssp T---TCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred C---CeEeeEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHH
Confidence 7 99999999999999999999999999997553332 22234566789999999999999999999999999999
Q ss_pred HhCC-CCCCCchhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 679 IVGR-PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 679 ltG~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
++|. +|+.......+...+. .. .. +..+..++ .++.+++.+||+.||++||||.||++.|+
T Consensus 236 l~~~~~p~~~~~~~e~~~~v~----~~--~~-----~~~p~~~~----~~~~~li~~cl~~~P~~RPt~~ev~~~L~ 297 (301)
T d1lufa_ 236 FSYGLQPYYGMAHEEVIYYVR----DG--NI-----LACPENCP----LELYNLMRLCWSKLPADRPSFCSIHRILQ 297 (301)
T ss_dssp HTTTCCTTTTSCHHHHHHHHH----TT--CC-----CCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HccCCCCCCCCCHHHHHHHHH----cC--CC-----CCCCccch----HHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 9985 6777655444333221 11 11 11122233 35778999999999999999999999886
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-47 Score=406.17 Aligned_cols=259 Identities=18% Similarity=0.332 Sum_probs=204.6
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCc----EEEEEEecccC-CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGT----FVAIRCLKMKK-CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~----~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
++|+..+.||+|+||+||+|++. +|+ .||||+++... ....++|.+|++++++++|||||+++|+|.+
T Consensus 9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~------ 82 (317)
T d1xkka_ 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT------ 82 (317)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEES------
T ss_pred HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec------
Confidence 46888999999999999999864 444 68999887543 3456789999999999999999999999875
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
+..++++||+.+|+|.+++... ...+++..++.++.|||+||+|||+. +||||||||+|||+|.++.+||+||
T Consensus 83 --~~~~~v~e~~~~~~l~~~~~~~--~~~~~~~~~~~i~~qi~~gl~yLH~~---~iiHrDlKp~NIll~~~~~~kl~DF 155 (317)
T d1xkka_ 83 --STVQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDF 155 (317)
T ss_dssp --SSEEEEEECCTTCBHHHHHHHT--SSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCC
T ss_pred --CCeeEEEEeccCCccccccccc--ccCCCHHHHHHHHHHHHHHHHHHHHc---CcccCcchhhcceeCCCCCeEeecc
Confidence 3468999999999999988764 34699999999999999999999997 9999999999999999999999999
Q ss_pred Cccccccccccc---ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccc
Q 003926 631 NLPLLAENAEKV---GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADES 706 (786)
Q Consensus 631 Gl~~~~~~~~~~---~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (786)
|+++........ ....++..|+|||.+..+.|+.++|||||||++|||+| |++||+......+...+....
T Consensus 156 Gla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~----- 230 (317)
T d1xkka_ 156 GLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE----- 230 (317)
T ss_dssp SHHHHTTTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTC-----
T ss_pred ccceecccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCC-----
Confidence 999765433221 22346788999999999999999999999999999999 789998765555444332210
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhhhhh
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAW 763 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~~~~ 763 (786)
+ +..+..++ ..+.+++.+||+.||++||||.||+++++........+
T Consensus 231 --~----~~~p~~~~----~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~~~~~~ 277 (317)
T d1xkka_ 231 --R----LPQPPICT----IDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRY 277 (317)
T ss_dssp --C----CCCCTTBC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSHHHH
T ss_pred --C----CCCCcccC----HHHHHHHHHhCCCChhhCcCHHHHHHHHHHHHhChHhh
Confidence 0 11111222 35678889999999999999999999988665443333
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.5e-48 Score=397.08 Aligned_cols=250 Identities=22% Similarity=0.384 Sum_probs=197.1
Q ss_pred cCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~ 556 (786)
++|+..+.||+|+||.||+|+++ |+.||||+++.. ...++|.+|++++++++|||||+++|+|.+. .+..+
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~i~~~--~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~------~~~~~ 77 (262)
T d1byga_ 7 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEE------KGGLY 77 (262)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--------CCE
T ss_pred HHeEEeEEEecCCCeEEEEEEEC-CeEEEEEEECcH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEEec------CCcEE
Confidence 45677899999999999999985 789999999754 3457899999999999999999999998641 24579
Q ss_pred EEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccc
Q 003926 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636 (786)
Q Consensus 557 LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~ 636 (786)
+||||+++|+|.++|.... ...++|..+++++.|+|.||.|||+. +|+||||||+|||++.++.+|++|||+++..
T Consensus 78 lv~ey~~~g~L~~~l~~~~-~~~l~~~~~~~i~~~i~~al~ylH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~ 153 (262)
T d1byga_ 78 IVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEA 153 (262)
T ss_dssp EEECCCTTEEHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC----
T ss_pred EEEeccCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHhhccccccC---ceeccccchHhheecCCCCEeecccccceec
Confidence 9999999999999997531 23589999999999999999999997 9999999999999999999999999999765
Q ss_pred ccccccccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccccccccccc
Q 003926 637 ENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPA 715 (786)
Q Consensus 637 ~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 715 (786)
.... ....++..|+|||.+.++.+|.++|||||||++|||+| |++|+.......+...+.. . ..+.
T Consensus 154 ~~~~--~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~----~-------~~~~ 220 (262)
T d1byga_ 154 SSTQ--DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK----G-------YKMD 220 (262)
T ss_dssp ----------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTT----T-------CCCC
T ss_pred CCCC--ccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHc----C-------CCCC
Confidence 4322 23345678999999988999999999999999999998 7888877655554433321 0 1111
Q ss_pred ccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 716 VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 716 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
.+..++ ..+.+++.+||+.||++||||.||+++|+-.
T Consensus 221 ~~~~~~----~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i 257 (262)
T d1byga_ 221 APDGCP----PAVYEVMKNCWHLDAAMRPSFLQLREQLEHI 257 (262)
T ss_dssp CCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCccCC----HHHHHHHHHHcccCHhHCcCHHHHHHHHHHH
Confidence 222222 3567888999999999999999999999744
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-46 Score=400.94 Aligned_cols=253 Identities=17% Similarity=0.274 Sum_probs=210.6
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
.++|+..+.||+|+||+||+|+. .+|+.||||+++... ....+.+.+|+++|++++|||||++++++.+
T Consensus 4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~------- 76 (337)
T d1o6la_ 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT------- 76 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEEC-------
T ss_pred hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeecc-------
Confidence 35788999999999999999996 479999999997542 3346789999999999999999999998875
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
.+..|+|||||++|+|.+++... ..++......++.|++.||+|||+. +||||||||+|||+|.++.+||+|||
T Consensus 77 ~~~~~iv~ey~~gg~L~~~~~~~---~~~~e~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NILl~~~g~vkl~DFG 150 (337)
T d1o6la_ 77 HDRLCFVMEYANGGELFFHLSRE---RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFG 150 (337)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred ccccccceeccCCCchhhhhhcc---cCCcHHHHHHHHHHHhhhhhhhhhc---CccccccCHHHeEecCCCCEEEeecc
Confidence 46799999999999999999863 3588888999999999999999998 99999999999999999999999999
Q ss_pred ccccccc-ccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 632 LPLLAEN-AEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 632 l~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
+++.... ........||+.|+|||.+.+..|+.++||||+||++|||++|++||...+...+...+.. ..
T Consensus 151 ~a~~~~~~~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~---~~------ 221 (337)
T d1o6la_ 151 LCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM---EE------ 221 (337)
T ss_dssp TCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---CC------
T ss_pred cccccccCCcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhc---CC------
Confidence 9975533 3334456789999999999999999999999999999999999999987665544332211 11
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCC-----HHHHHHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPS-----VEDVLWNLQFAA 757 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt-----~~evl~~l~~~~ 757 (786)
...+.... .++.+++.+||++||++||+ +.|+++|+||..
T Consensus 222 ---~~~p~~~s----~~~~dli~~~L~~dP~~R~~~~~~~~~eil~Hp~f~~ 266 (337)
T d1o6la_ 222 ---IRFPRTLS----PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 266 (337)
T ss_dssp ---CCCCTTSC----HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred ---CCCCccCC----HHHHHHHHhhccCCchhhcccccccHHHHHcCccccc
Confidence 11111222 34668888999999999994 899999999864
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.7e-47 Score=395.40 Aligned_cols=253 Identities=18% Similarity=0.321 Sum_probs=195.3
Q ss_pred hcCCCccCccCCCCCceeEEEEecC----CcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLKN----GTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~~----g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
.++|+..+.||+|+||+||+|+... +..||||.++..... ..+.|.+|+++|++++|||||+++|+|.+
T Consensus 6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~------ 79 (273)
T d1mp8a_ 6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE------ 79 (273)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS------
T ss_pred HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec------
Confidence 4568888999999999999998642 457999998754433 24679999999999999999999998853
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
+..++|||||++|+|.+++.... ..+++..++.++.|+++||.|||+. +||||||||+||+++.++.+||+||
T Consensus 80 --~~~~iv~E~~~~g~l~~~~~~~~--~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDlKp~NIll~~~~~~Kl~Df 152 (273)
T d1mp8a_ 80 --NPVWIIMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDF 152 (273)
T ss_dssp --SSCEEEEECCTTEEHHHHHHHTT--TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC-
T ss_pred --CeEEEEEEeccCCcHHhhhhccC--CCCCHHHHHHHHHHHHHHhhhhccc---CeeccccchhheeecCCCcEEEccc
Confidence 35799999999999999887532 4689999999999999999999997 9999999999999999999999999
Q ss_pred Cccccccccc--ccccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccc
Q 003926 631 NLPLLAENAE--KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESA 707 (786)
Q Consensus 631 Gl~~~~~~~~--~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (786)
|+++...... ......++..|+|||.+..+.|+.++|||||||++|||+| |++|+.......+...+.. . .
T Consensus 153 G~a~~~~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~----~--~ 226 (273)
T d1mp8a_ 153 GLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN----G--E 226 (273)
T ss_dssp ------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT----T--C
T ss_pred hhheeccCCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHc----C--C
Confidence 9997654322 2223456778999999999999999999999999999998 8999987655444332211 1 0
Q ss_pred ccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 708 RRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 708 ~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
.+..+..++ ..+.+++.+||+.||++|||+.||+++|...
T Consensus 227 -----~~~~~~~~~----~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i 266 (273)
T d1mp8a_ 227 -----RLPMPPNCP----PTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 266 (273)
T ss_dssp -----CCCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -----CCCCCCCCC----HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 011122233 3567888999999999999999999998754
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-46 Score=398.40 Aligned_cols=256 Identities=24% Similarity=0.378 Sum_probs=201.8
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCc--EEEEEEecccC-CCChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGT--FVAIRCLKMKK-CHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~--~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~~ 551 (786)
++|+..++||+|+||+||+|+++ +|. .||||+++... ....++|.+|+++|+++ +|||||+++|+|.+
T Consensus 10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~------- 82 (309)
T d1fvra_ 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH------- 82 (309)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEE-------
T ss_pred HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEec-------
Confidence 56778899999999999999975 444 57888876433 33456899999999999 79999999999976
Q ss_pred CceEEEEEecCCCCChhHHhhcCC-------------CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCcee
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGH-------------AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDIL 618 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~-------------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NIL 618 (786)
.+..++||||+++|+|.++|+... ....++|.++..++.|+|+||.|||+. +|+||||||+|||
T Consensus 83 ~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~---~iiHrDlkp~NIL 159 (309)
T d1fvra_ 83 RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNIL 159 (309)
T ss_dssp TTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred CCeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcC---CccccccccceEE
Confidence 467899999999999999997531 235699999999999999999999997 9999999999999
Q ss_pred ecCCCcccccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCC-CCCCCchhHHHHHHH
Q 003926 619 LDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQL 697 (786)
Q Consensus 619 ld~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~-~p~~~~~~~~~~~~~ 697 (786)
++.++.+||+|||+++............++..|+|||.+..+.|+.++|||||||++|||++|. +|+.......+...+
T Consensus 160 ~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i 239 (309)
T d1fvra_ 160 VGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL 239 (309)
T ss_dssp ECGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHG
T ss_pred EcCCCceEEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence 9999999999999997655444334456778899999999999999999999999999999975 567665544433222
Q ss_pred HHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 698 QAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 698 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
. .. ..+..+..++ .++.+++.+||+.||++||||+||+++|....
T Consensus 240 ~----~~-------~~~~~~~~~~----~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~ 284 (309)
T d1fvra_ 240 P----QG-------YRLEKPLNCD----DEVYDLMRQCWREKPYERPSFAQILVSLNRML 284 (309)
T ss_dssp G----GT-------CCCCCCTTBC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred H----hc-------CCCCCCccCC----HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 1 10 0111122222 35678888999999999999999999986443
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.7e-46 Score=397.42 Aligned_cols=250 Identities=20% Similarity=0.313 Sum_probs=207.6
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEeccc---CCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMK---KCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|+..+.||+|+||+||+|+. .+|+.||||+++.. .....+.|.+|+.++++++|||||++++++.+ .
T Consensus 4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~-------~ 76 (316)
T d1fota_ 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQD-------A 76 (316)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEEC-------S
T ss_pred hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEee-------C
Confidence 5688899999999999999996 46999999999753 23456789999999999999999999999875 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..|+|||||++|+|..++... ..+++.....++.|++.||+|||+. +||||||||+|||++.++.+||+|||+
T Consensus 77 ~~~~ivmE~~~gg~l~~~~~~~---~~~~~~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NILl~~~g~vkL~DFG~ 150 (316)
T d1fota_ 77 QQIFMIMDYIEGGELFSLLRKS---QRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGF 150 (316)
T ss_dssp SEEEEEECCCCSCBHHHHHHHT---SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSS
T ss_pred CeeeeEeeecCCcccccccccc---ccccccHHHHHHHHHHHhhhhhccC---cEEccccCchheeEcCCCCEEEecCcc
Confidence 6799999999999999998763 3578888889999999999999998 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
++..... .....|+..|+|||.+.+..|+.++||||+||++|||+||++||...+...+...+. ...
T Consensus 151 a~~~~~~--~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~---~~~-------- 217 (316)
T d1fota_ 151 AKYVPDV--TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKIL---NAE-------- 217 (316)
T ss_dssp CEECSSC--BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH---HCC--------
T ss_pred ceEeccc--cccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHH---cCC--------
Confidence 9765433 234578899999999988889999999999999999999999998765544332221 111
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERP-----SVEDVLWNLQFAA 757 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~~l~~~~ 757 (786)
...+...+ .++.+++.+||++||.+|| |++|+++|+||..
T Consensus 218 -~~~p~~~s----~~~~~li~~~L~~dp~~R~~~~r~t~~~il~Hp~f~~ 262 (316)
T d1fota_ 218 -LRFPPFFN----EDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKE 262 (316)
T ss_dssp -CCCCTTSC----HHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSS
T ss_pred -CCCCCCCC----HHHHHHHHHHhhhCHHhccccchhhHHHHHcCccccc
Confidence 00111112 3466788899999999996 9999999999865
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=8.4e-47 Score=392.04 Aligned_cols=255 Identities=18% Similarity=0.308 Sum_probs=206.7
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCC---------hHHHHHHHHHHhcCC-CCCcceeeeeeeec
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHS---------TRNFMHHIELISKLR-HRHLVSALGHCFEC 545 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~---------~~~f~~E~~~l~~l~-H~NIv~l~g~~~~~ 545 (786)
++|+..+.||+|+||+||+|+. .+|+.||||+++...... .+.+.+|+.++++++ |||||++++++.+
T Consensus 3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~- 81 (277)
T d1phka_ 3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET- 81 (277)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC-
T ss_pred ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeccc-
Confidence 5788899999999999999996 479999999997654221 235889999999997 9999999999875
Q ss_pred cccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcc
Q 003926 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVA 625 (786)
Q Consensus 546 ~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~ 625 (786)
.+..|+|||||++|||.++|... ..+++.+...++.|+++||+|||+. +|+||||||+|||++.++.+
T Consensus 82 ------~~~~~ivmE~~~~g~L~~~l~~~---~~l~e~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~~ 149 (277)
T d1phka_ 82 ------NTFFFLVFDLMKKGELFDYLTEK---VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNI 149 (277)
T ss_dssp ------SSEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCE
T ss_pred ------CcceEEEEEcCCCchHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHc---CCcccccccceEEEcCCCCe
Confidence 46799999999999999999753 3699999999999999999999997 99999999999999999999
Q ss_pred cccCCCcccccccccccccccccccccCcccccc------CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHH
Q 003926 626 KISSYNLPLLAENAEKVGHVIPYSGSIDPTNSAR------GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQA 699 (786)
Q Consensus 626 kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~------~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~ 699 (786)
||+|||+++............++..|++||.+.. ..++.++||||+||++|||+||+.||...........+..
T Consensus 150 kl~DFG~a~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~ 229 (277)
T d1phka_ 150 KLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMS 229 (277)
T ss_dssp EECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred EEccchheeEccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHh
Confidence 9999999977655444455678889999998652 3578899999999999999999999987655443322211
Q ss_pred HHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 700 VVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 700 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
... ....+ .. .....++.+++.+||+.||++|||+.||++|+||.
T Consensus 230 ---~~~----~~~~~-~~----~~~s~~~~~li~~~L~~~p~~R~s~~eil~h~~~~ 274 (277)
T d1phka_ 230 ---GNY----QFGSP-EW----DDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 274 (277)
T ss_dssp ---TCC----CCCTT-TG----GGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred ---CCC----CCCCc-cc----ccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHHH
Confidence 110 00011 11 11223567888999999999999999999998874
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-46 Score=399.29 Aligned_cols=257 Identities=14% Similarity=0.201 Sum_probs=208.8
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
++|...+.||+|+||+||+|+.+ +|+.||||.++... .....+.+|+++|++++|||||++++++.+ .+..
T Consensus 5 ~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~-------~~~~ 76 (321)
T d1tkia_ 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFES-------MEEL 76 (321)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEE-------TTEE
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEE-------CCEE
Confidence 56888999999999999999965 68999999997653 234568899999999999999999998875 4679
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCC--CcccccCCCcc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN--LVAKISSYNLP 633 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~--~~~kl~DfGl~ 633 (786)
|+|||||++|+|.+++.... ..+++.+...++.|++.||+|||+. +|+||||||+|||++.+ ..+||+|||++
T Consensus 77 ~lvmE~~~gg~L~~~i~~~~--~~l~e~~~~~i~~qi~~al~yLH~~---~iiHrDlKp~NIll~~~~~~~ikl~DFG~~ 151 (321)
T d1tkia_ 77 VMIFEFISGLDIFERINTSA--FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQA 151 (321)
T ss_dssp EEEECCCCCCBHHHHHTSSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTC
T ss_pred EEEEecCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHc---CCCcccccccceeecCCCceEEEEcccchh
Confidence 99999999999999997532 3589999999999999999999997 99999999999999854 47899999999
Q ss_pred cccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccccc
Q 003926 634 LLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVD 713 (786)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 713 (786)
+............++..|+|||......|+.++||||+||++|||++|++||.......+...+.. ... .++
T Consensus 152 ~~~~~~~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~---~~~-----~~~ 223 (321)
T d1tkia_ 152 RQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMN---AEY-----TFD 223 (321)
T ss_dssp EECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH---TCC-----CCC
T ss_pred hccccCCcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHh---CCC-----CCC
Confidence 766554444556678899999999888899999999999999999999999987654433322211 110 011
Q ss_pred ccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 714 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
...... ...++.+++.+||+.||++|||+.|+++|+|+.+.
T Consensus 224 ~~~~~~----~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~ 264 (321)
T d1tkia_ 224 EEAFKE----ISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK 264 (321)
T ss_dssp HHHHTT----SCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred hhhccC----CCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccC
Confidence 111111 12346788889999999999999999999998753
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5e-47 Score=393.42 Aligned_cols=252 Identities=19% Similarity=0.317 Sum_probs=191.6
Q ss_pred cCCCccCccCCCCCceeEEEEec--C--CcEEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK--N--GTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDD 549 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~--~--g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~ 549 (786)
++|+..+.||+|+||+||+|++. + +..||||+++.... ...++|.+|+++|++++|||||+++|+|.+
T Consensus 8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~----- 82 (273)
T d1u46a_ 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT----- 82 (273)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-----
T ss_pred HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-----
Confidence 46788899999999999999864 2 34789999875432 224679999999999999999999999864
Q ss_pred CCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccC
Q 003926 550 SSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISS 629 (786)
Q Consensus 550 ~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 629 (786)
+..++|||||++|++.+++.... ..+++..++.++.|+|+||.|||+. +|+||||||+||+++.++.+||+|
T Consensus 83 ---~~~~lv~e~~~~~~l~~~~~~~~--~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDikp~NIll~~~~~vkl~D 154 (273)
T d1u46a_ 83 ---PPMKMVTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGD 154 (273)
T ss_dssp ---SSCEEEEECCTTCBHHHHHHHHG--GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECC
T ss_pred ---cchheeeeeecCcchhhhhhccc--CCCCHHHHHHHHHHHHHHHHHhhhC---CEeeeeecHHHhccccccceeecc
Confidence 24689999999999999887532 3599999999999999999999997 999999999999999999999999
Q ss_pred CCcccccccccc----cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhc
Q 003926 630 YNLPLLAENAEK----VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTAD 704 (786)
Q Consensus 630 fGl~~~~~~~~~----~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 704 (786)
||+++....... .....++..|+|||.+....++.++|||||||++|||+| |++||...........+. ...
T Consensus 155 fGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~---~~~ 231 (273)
T d1u46a_ 155 FGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKID---KEG 231 (273)
T ss_dssp CTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH---TSC
T ss_pred chhhhhcccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHH---hCC
Confidence 999976533221 123345668999999999999999999999999999998 899997765544332221 111
Q ss_pred cccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 705 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
. .+.....++ ..+.+++.+||+.||++||||.||++.|..
T Consensus 232 ---~----~~~~~~~~~----~~l~~li~~cl~~dp~~RPt~~ei~~~L~~ 271 (273)
T d1u46a_ 232 ---E----RLPRPEDCP----QDIYNVMVQCWAHKPEDRPTFVALRDFLLE 271 (273)
T ss_dssp ---C----CCCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ---C----CCCCccccc----HHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 0 111112222 356788899999999999999999987753
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-46 Score=395.12 Aligned_cols=261 Identities=20% Similarity=0.317 Sum_probs=195.2
Q ss_pred HHHHHhcCCCccCccCCCCCceeEEEEec------CCcEEEEEEecccCC-CChHHHHHHHHHHhcC-CCCCcceeeeee
Q 003926 471 ELEEATNNFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKC-HSTRNFMHHIELISKL-RHRHLVSALGHC 542 (786)
Q Consensus 471 ~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l-~H~NIv~l~g~~ 542 (786)
+++...++|+..+.||+|+||+||+|+.. +++.||||+++.... ...++|.+|++++.++ +|+|||.+++++
T Consensus 7 ~wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~ 86 (299)
T d1ywna1 7 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGAC 86 (299)
T ss_dssp HHBCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cccccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeee
Confidence 34444567889999999999999999853 356899999975433 2346788898888877 689999999987
Q ss_pred eeccccCCCCceEEEEEecCCCCChhHHhhcCCC-------------CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccc
Q 003926 543 FECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHA-------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFS 609 (786)
Q Consensus 543 ~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivH 609 (786)
.+. ....++|||||++|+|.++++.... ...++|.+++.++.|+|+||+|||+. +|||
T Consensus 87 ~~~------~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~ivH 157 (299)
T d1ywna1 87 TKP------GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIH 157 (299)
T ss_dssp CST------TSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHT---TCCC
T ss_pred ccC------CCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhC---CCcC
Confidence 641 3458999999999999999975321 23589999999999999999999997 9999
Q ss_pred cCCCCCceeecCCCcccccCCCccccccccc---ccccccccccccCccccccCCCCcccceeehhHHHHHHHhC-CCCC
Q 003926 610 NNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVG-RPLK 685 (786)
Q Consensus 610 rdlk~~NILld~~~~~kl~DfGl~~~~~~~~---~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG-~~p~ 685 (786)
|||||+|||+++++.+||+|||+++...... ......++..|+|||.+..+.++.++|||||||++|||+|| ++||
T Consensus 158 rDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~ 237 (299)
T d1ywna1 158 RDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 237 (299)
T ss_dssp SCCCGGGEEECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred CcCCccceeECCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCC
Confidence 9999999999999999999999997553322 22334678889999999999999999999999999999997 5677
Q ss_pred CCchh-HHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 686 SRKEV-DLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 686 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
..... ..+...+. ... .+..+..++ .++.+++.+||+.||++||||.||++||+-
T Consensus 238 ~~~~~~~~~~~~~~----~~~-------~~~~~~~~~----~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ 293 (299)
T d1ywna1 238 PGVKIDEEFCRRLK----EGT-------RMRAPDYTT----PEMYQTMLDCWHGEPSQRPTFSELVEHLGN 293 (299)
T ss_dssp TTCCCSHHHHHHHH----HTC-------CCCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHh----cCC-------CCCCCccCC----HHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 65432 22222211 110 111112222 356788899999999999999999999974
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.8e-46 Score=398.02 Aligned_cols=262 Identities=14% Similarity=0.218 Sum_probs=203.9
Q ss_pred hcCCCcc-CccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhc-CCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTS-AFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISK-LRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~-~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~-l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.++|.+. ++||+|+||+||+|+. .+|+.||||+++. ...+.+|++++.+ .+|||||++++++.... ...
T Consensus 10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~---~~~ 81 (335)
T d2ozaa1 10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLY---AGR 81 (335)
T ss_dssp GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEE---TTE
T ss_pred ccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecc---cCC
Confidence 3567765 4699999999999995 5799999999853 3567899998765 48999999999875421 123
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC---CCcccccC
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ---NLVAKISS 629 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~---~~~~kl~D 629 (786)
...|+|||||++|+|.++|.+.. ...+++.+...++.|++.||+|||+. +|+||||||+|||++. ++.+||+|
T Consensus 82 ~~~~ivmEy~~gg~L~~~i~~~~-~~~l~e~~~~~i~~qi~~al~ylH~~---~iiHRDiKp~NIll~~~~~~~~~Kl~D 157 (335)
T d2ozaa1 82 KCLLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTD 157 (335)
T ss_dssp EEEEEEEECCCSEEHHHHHHSCS-CCCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCSSTTCCEEECC
T ss_pred CEEEEEEECCCCCcHHHHHHhcC-CCCcCHHHHHHHHHHHHHHHHHHHHc---CCccccccccccccccccccccccccc
Confidence 56899999999999999998632 34699999999999999999999997 9999999999999986 45799999
Q ss_pred CCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 630 YNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 630 fGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
||+++............|+..|+|||.+....|+.++|||||||++|||+||++||...........+..... .
T Consensus 158 FG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~------~ 231 (335)
T d2ozaa1 158 FGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR------M 231 (335)
T ss_dssp CTTCEECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCC------S
T ss_pred cceeeeccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHh------c
Confidence 9999776555555566789999999999888899999999999999999999999975433222111110000 0
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.....+.........++.+++.+||+.||++|||+.|+++|+|+.+
T Consensus 232 --~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~ 277 (335)
T d2ozaa1 232 --GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 277 (335)
T ss_dssp --CSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSHHHHT
T ss_pred --CCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHhhC
Confidence 0001111111233456778899999999999999999999999864
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-45 Score=390.30 Aligned_cols=249 Identities=20% Similarity=0.357 Sum_probs=194.8
Q ss_pred cCccCCCCCceeEEEEecC----CcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEE
Q 003926 482 SAFMGEGSQGQMYRGRLKN----GTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (786)
Q Consensus 482 ~~~iG~G~fg~Vy~~~~~~----g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~ 556 (786)
.++||+|+||+||+|++.+ ...||||+++.... ...++|.+|+++|++++|||||+++|+|.+. ....+
T Consensus 32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~------~~~~~ 105 (311)
T d1r0pa_ 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS------EGSPL 105 (311)
T ss_dssp EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEET------TTEEE
T ss_pred ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEec------CCceE
Confidence 4689999999999999753 23699999975332 2346799999999999999999999998752 34689
Q ss_pred EEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccc
Q 003926 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636 (786)
Q Consensus 557 LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~ 636 (786)
+|||||++|+|.++++.. ...+++..++.++.|+|+||.|||+. +|+||||||+|||+|+++.+||+|||+++..
T Consensus 106 lv~E~~~~g~l~~~~~~~--~~~~~~~~~~~i~~qia~gL~~lH~~---~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~ 180 (311)
T d1r0pa_ 106 VVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDM 180 (311)
T ss_dssp EEEECCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSSGGGCCT
T ss_pred EEEEEeecCchhhhhccc--cccchHHHHHHHHHHHHHhhhhhccc---CcccCCccHHhEeECCCCCEEEecccchhhc
Confidence 999999999999998864 34678999999999999999999997 9999999999999999999999999999765
Q ss_pred ccccc-----cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCch-hHHHHHHHHHHHHhccccccc
Q 003926 637 ENAEK-----VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 637 ~~~~~-----~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~ 710 (786)
..... .....++..|+|||....+.++.|+|||||||++|||+||+.|+.... ...+...+ .... .
T Consensus 181 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i---~~g~-----~ 252 (311)
T d1r0pa_ 181 YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL---LQGR-----R 252 (311)
T ss_dssp TTTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHH---HTTC-----C
T ss_pred cccccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHH---HcCC-----C
Confidence 43221 122346778999999999999999999999999999999776664322 21111111 1110 1
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
...| ..++ ..+.+++.+||+.||++||+|.||+++|+..
T Consensus 253 ~~~p---~~~~----~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i 291 (311)
T d1r0pa_ 253 LLQP---EYCP----DPLYEVMLKCWHPKAEMRPSFSELVSRISAI 291 (311)
T ss_dssp CCCC---TTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCc---ccCc----HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 1111 2222 3567888999999999999999999998744
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=8.1e-46 Score=399.80 Aligned_cols=255 Identities=17% Similarity=0.242 Sum_probs=202.1
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHH---HHHHHhcCCCCCcceeeeeeeecccc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMH---HIELISKLRHRHLVSALGHCFECYFD 548 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~---E~~~l~~l~H~NIv~l~g~~~~~~~~ 548 (786)
.++|+..+.||+|+||+||+|+.. +|+.||||++..... .....+.+ |+++++.++|||||++++++..
T Consensus 3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~---- 78 (364)
T d1omwa3 3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT---- 78 (364)
T ss_dssp STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEEC----
T ss_pred HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEE----
Confidence 367889999999999999999965 699999999864321 22334444 4778888899999999998865
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCccccc
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKIS 628 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~ 628 (786)
.+..|+|||||++|+|.++|.+. ..+++.....++.|++.||+|||+. +||||||||+|||++.++.+||+
T Consensus 79 ---~~~~~ivmE~~~gg~L~~~l~~~---~~~~e~~~~~~~~qi~~aL~ylH~~---~iiHrDlKP~NILl~~~g~iKl~ 149 (364)
T d1omwa3 79 ---PDKLSFILDLMNGGDLHYHLSQH---GVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRIS 149 (364)
T ss_dssp ---SSEEEEEECCCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSSSCEEEC
T ss_pred ---CCEEEEEEEecCCCcHHHHHHhc---ccccHHHHHHHHHHHHHHHHHHHHC---CccceeeccceeEEcCCCcEEEe
Confidence 46789999999999999999763 3588999999999999999999997 99999999999999999999999
Q ss_pred CCCcccccccccccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccc
Q 003926 629 SYNLPLLAENAEKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESA 707 (786)
Q Consensus 629 DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (786)
|||+++..... ......||..|+|||.+.. ..|+.++|||||||++|||+||++||................ ..
T Consensus 150 DFGla~~~~~~-~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~-~~--- 224 (364)
T d1omwa3 150 DLGLACDFSKK-KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL-TM--- 224 (364)
T ss_dssp CCTTCEECSSS-CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSS-SC---
T ss_pred eeceeeecCCC-cccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc-cC---
Confidence 99999765443 2334568899999999865 458999999999999999999999997644332222111110 00
Q ss_pred ccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCC-----HHHHHHHHHHHH
Q 003926 708 RRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPS-----VEDVLWNLQFAA 757 (786)
Q Consensus 708 ~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt-----~~evl~~l~~~~ 757 (786)
.+..+...+ ..+.+++.+||+.||++||| +.|+++|+||..
T Consensus 225 -----~~~~~~~~s----~~~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~ 270 (364)
T d1omwa3 225 -----AVELPDSFS----PELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS 270 (364)
T ss_dssp -----CCCCCSSSC----HHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTT
T ss_pred -----CCCCCCCCC----HHHHHHHHHHcccCHHHhCCCcccCHHHHHcCccccC
Confidence 111111122 34678888999999999999 699999999865
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.8e-46 Score=393.10 Aligned_cols=263 Identities=21% Similarity=0.328 Sum_probs=195.9
Q ss_pred CCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHH--HHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHI--ELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~--~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
+|...+.||+|+||.||+|++ +|+.||||+++... .+++.+|. ..+++++|||||+++|+|.... .....+
T Consensus 4 ~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~---~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~---~~~~~~ 76 (303)
T d1vjya_ 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDN---GTWTQL 76 (303)
T ss_dssp GEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC---SSSEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCC---CcceEE
Confidence 455678899999999999997 58899999986543 34454554 4556789999999999997632 223468
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCC-----CCCccccCCCCCceeecCCCcccccCC
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI-----VPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~-----~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
|+|||||++|+|.++|++. .++|.+++.++.|+|.||+|+|+.. .++||||||||+|||+|+++.+||+||
T Consensus 77 ~lv~Ey~~~g~L~~~l~~~----~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DF 152 (303)
T d1vjya_ 77 WLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp EEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCC
T ss_pred EEEEecccCCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEec
Confidence 9999999999999999863 5899999999999999999999731 358999999999999999999999999
Q ss_pred Cccccccccc-----ccccccccccccCccccccC------CCCcccceeehhHHHHHHHhCCCCCCCchhH--------
Q 003926 631 NLPLLAENAE-----KVGHVIPYSGSIDPTNSARG------KLEEKIDIYDFGLILLEIIVGRPLKSRKEVD-------- 691 (786)
Q Consensus 631 Gl~~~~~~~~-----~~~~~~~~~~~~aPe~~~~~------~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~-------- 691 (786)
|+++...... ......++..|+|||.+... .++.|+|||||||++|||+||.+|+......
T Consensus 153 Gl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~ 232 (303)
T d1vjya_ 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 232 (303)
T ss_dssp TTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTS
T ss_pred CccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcc
Confidence 9987654322 12335678999999987653 2677999999999999999998876432110
Q ss_pred ---HHHHHHHHHHHhccccccccccccccccC-cHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 692 ---LLKNQLQAVVTADESARRSMVDPAVNKAC-LDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 692 ---~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
........... ....+|.++... ..+....+.+++.+||+.||++||||.||+++|....
T Consensus 233 ~~~~~~~~~~~~~~------~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~ 296 (303)
T d1vjya_ 233 PSDPSVEEMRKVVC------EQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296 (303)
T ss_dssp CSSCCHHHHHHHHT------TSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHH
T ss_pred cccchHHHHHHHHh------ccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence 00011111111 111222222221 2345567888999999999999999999999997443
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.7e-45 Score=395.03 Aligned_cols=251 Identities=16% Similarity=0.244 Sum_probs=208.0
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|+..+.||+|+||+||+|+.+ +|+.||||+++... ....+.+.+|+++|++++|||||++++++.. .
T Consensus 41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-------~ 113 (350)
T d1rdqe_ 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD-------N 113 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-------S
T ss_pred cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccc-------c
Confidence 46888999999999999999964 79999999987432 3445789999999999999999999998865 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
...++||||+.+|+|.+++.+. ..+++.....++.|++.||.|||+. +||||||||+|||++.++.+||+|||+
T Consensus 114 ~~~~~v~e~~~~g~l~~~l~~~---~~l~e~~~~~i~~qi~~aL~yLH~~---~iiHRDIKP~NILl~~~g~ikL~DFG~ 187 (350)
T d1rdqe_ 114 SNLYMVMEYVAGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGF 187 (350)
T ss_dssp SEEEEEEECCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred cccccccccccccchhhhHhhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCcCCHHHcccCCCCCEEeeecee
Confidence 5689999999999999999753 3589999999999999999999998 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
++..... .....|+..|+|||.+.+..|+.++|||||||++|||+||++||...........+. ...
T Consensus 188 a~~~~~~--~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~---~~~-------- 254 (350)
T d1rdqe_ 188 AKRVKGR--TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV---SGK-------- 254 (350)
T ss_dssp CEECSSC--BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---HCC--------
T ss_pred eeecccc--cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHh---cCC--------
Confidence 9766432 234568889999999998889999999999999999999999998765443322221 111
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCC-----CCHHHHHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAER-----PSVEDVLWNLQFAAQ 758 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~R-----Pt~~evl~~l~~~~~ 758 (786)
+..+... ..++.+++.+||+.||++| ||++|+++|+||...
T Consensus 255 -~~~p~~~----s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~f~~~ 300 (350)
T d1rdqe_ 255 -VRFPSHF----SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300 (350)
T ss_dssp -CCCCTTC----CHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred -CCCCccC----CHHHHHHHHHHhhhCHHhccccccccHHHHHcCccccCC
Confidence 0111112 2356688889999999999 499999999998753
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-45 Score=387.60 Aligned_cols=255 Identities=20% Similarity=0.367 Sum_probs=200.2
Q ss_pred hcCCCccCccCCCCCceeEEEEec--------CCcEEEEEEecccCCC-ChHHHHHHHHHHhcC-CCCCcceeeeeeeec
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK--------NGTFVAIRCLKMKKCH-STRNFMHHIELISKL-RHRHLVSALGHCFEC 545 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~ 545 (786)
.++|...+.||+|+||.||+|+.. ++..||||+++..... ...+|.+|+..+.++ +|||||+++|+|.+
T Consensus 12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~- 90 (299)
T d1fgka_ 12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ- 90 (299)
T ss_dssp GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEeccccccc-
Confidence 456778899999999999999853 2357999999765432 346799999999888 89999999999975
Q ss_pred cccCCCCceEEEEEecCCCCChhHHhhcCCC-------------CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCC
Q 003926 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGHA-------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNL 612 (786)
Q Consensus 546 ~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdl 612 (786)
.+..++|||||++|+|.++|..... ...+++.+++.++.|+|.||+|||+. +||||||
T Consensus 91 ------~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~---~ivHrDi 161 (299)
T d1fgka_ 91 ------DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDL 161 (299)
T ss_dssp ------SSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred ------CCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhC---CEEeeee
Confidence 3568999999999999999975421 24589999999999999999999998 9999999
Q ss_pred CCCceeecCCCcccccCCCcccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCc
Q 003926 613 KITDILLDQNLVAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRK 688 (786)
Q Consensus 613 k~~NILld~~~~~kl~DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~ 688 (786)
||+|||++.++.+||+|||+++....... .....++..|+|||.+..+.|+.|+|||||||++|||+| |++||...
T Consensus 162 Kp~NiLl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~ 241 (299)
T d1fgka_ 162 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 241 (299)
T ss_dssp SGGGEEECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred cccceeecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCC
Confidence 99999999999999999999976543322 223456778999999999999999999999999999998 78888776
Q ss_pred hhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 689 EVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
..+.+...+.. . ..+..+..++ ..+.+++.+||+.||++|||+.||++.|+-
T Consensus 242 ~~~~~~~~i~~----~-------~~~~~p~~~~----~~l~~li~~cl~~dP~~Rps~~eil~~L~~ 293 (299)
T d1fgka_ 242 PVEELFKLLKE----G-------HRMDKPSNCT----NELYMMMRDCWHAVPSQRPTFKQLVEDLDR 293 (299)
T ss_dssp CHHHHHHHHHT----T-------CCCCCCSSCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CHHHHHHHHHc----C-------CCCCCCccch----HHHHHHHHHHccCCHhHCcCHHHHHHHHHH
Confidence 65544333211 1 0111122222 356788999999999999999999999863
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.9e-46 Score=392.97 Aligned_cols=252 Identities=22% Similarity=0.369 Sum_probs=206.6
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHh-cCCCCCcceeeeeeeeccccCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELIS-KLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~-~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
++|+..+.||+|+||+||+|+.+ +|+.||||+++... ....+.+.+|+.++. .++|||||++++++.+
T Consensus 2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~------- 74 (320)
T d1xjda_ 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQT------- 74 (320)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEEC-------
T ss_pred CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEcc-------
Confidence 57888999999999999999965 79999999997532 334567788888765 6899999999999875
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
.+..|+|||||++|+|.+++... ..++..+...++.|++.||+|||+. +|+||||||+|||+++++.+||+|||
T Consensus 75 ~~~~yivmEy~~~g~L~~~i~~~---~~~~e~~~~~~~~qi~~al~ylH~~---~iiHrDikp~NiL~~~~~~~kl~DFG 148 (320)
T d1xjda_ 75 KENLFFVMEYLNGGDLMYHIQSC---HKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFG 148 (320)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred CCceeEEEeecCCCcHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCcccceeecCCCceeccccc
Confidence 46799999999999999999763 3588899999999999999999998 99999999999999999999999999
Q ss_pred cccccccc-cccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 632 LPLLAENA-EKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 632 l~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
+++..... .......|+..|+|||.+....|+.++|||||||++|||+||+.||.+.....+...+.. .
T Consensus 149 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~----~------ 218 (320)
T d1xjda_ 149 MCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRM----D------ 218 (320)
T ss_dssp TCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH----C------
T ss_pred hhhhcccccccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHc----C------
Confidence 99754332 233345678899999999999999999999999999999999999987665544332211 1
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHH-HHHHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVE-DVLWNLQFAA 757 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~-evl~~l~~~~ 757 (786)
.+..+...+ ..+.+++.+||+.||++|||+. |+++|+||.+
T Consensus 219 --~~~~p~~~s----~~~~dli~~~L~~dP~~R~s~~~~l~~hpff~~ 260 (320)
T d1xjda_ 219 --NPFYPRWLE----KEAKDLLVKLFVREPEKRLGVRGDIRQHPLFRE 260 (320)
T ss_dssp --CCCCCTTSC----HHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTT
T ss_pred --CCCCCccCC----HHHHHHHHHhcccCCCCCcCHHHHHHhCchhcc
Confidence 111111222 3467888899999999999995 8999999864
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-45 Score=386.52 Aligned_cols=262 Identities=20% Similarity=0.278 Sum_probs=196.4
Q ss_pred cCccCCCCCceeEEEEe-cCCcEEEEEEecccCCC-----ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 482 SAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCH-----STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 482 ~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~-----~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
.++||+|+||+||+|+. .+|+.||||+++..... ..+.+.+|+++|++++|||||++++++.. .+..
T Consensus 3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~-------~~~~ 75 (299)
T d1ua2a_ 3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGH-------KSNI 75 (299)
T ss_dssp EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECC-------TTCC
T ss_pred ceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeecc-------CCce
Confidence 47899999999999996 46999999999754322 13568999999999999999999999865 4568
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
|+|||||++|++..+... ...+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 76 ~ivmE~~~~~~~~~~~~~---~~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDiKp~NIli~~~~~~KL~DFG~a~~ 149 (299)
T d1ua2a_ 76 SLVFDFMETDLEVIIKDN---SLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKS 149 (299)
T ss_dssp EEEEECCSEEHHHHHTTC---CSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGST
T ss_pred eehhhhhcchHHhhhhhc---ccCCCHHHHHHHHHHHHHHHHHhhcc---ceecccCCcceEEecCCCccccccCccccc
Confidence 999999999887776653 24588888999999999999999998 999999999999999999999999999965
Q ss_pred cccc-cccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCchhHH-HHHHHHHHHHhccccccccc
Q 003926 636 AENA-EKVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL-LKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 636 ~~~~-~~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 712 (786)
.... .......++..|+|||.+... .|+.++|||||||++|||+||++||....... +...................
T Consensus 150 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~ 229 (299)
T d1ua2a_ 150 FGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMC 229 (299)
T ss_dssp TTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTT
T ss_pred cCCCcccccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchh
Confidence 5432 233345678899999987654 58999999999999999999999997654433 33222222111111110000
Q ss_pred c-------cccccc----CcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 713 D-------PAVNKA----CLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 713 d-------~~~~~~----~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
. ...... ........+.+++.+||+.||++|||++|+++|+||.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~ 284 (299)
T d1ua2a_ 230 SLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFS 284 (299)
T ss_dssp SSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGT
T ss_pred ccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHhhC
Confidence 0 000000 0011234677899999999999999999999988864
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-45 Score=390.37 Aligned_cols=255 Identities=19% Similarity=0.314 Sum_probs=202.4
Q ss_pred HhcCCCccCccCCCCCceeEEEEec------CCcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeeeccc
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYF 547 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~ 547 (786)
..++|...+.||+|+||+||+|+++ +++.||||+++..... ....|.+|++++++++|||||+++|+|..
T Consensus 18 ~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~--- 94 (308)
T d1p4oa_ 18 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ--- 94 (308)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECS---
T ss_pred cHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEec---
Confidence 3467778899999999999999863 3678999999754322 23569999999999999999999999864
Q ss_pred cCCCCceEEEEEecCCCCChhHHhhcC-------CCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeec
Q 003926 548 DDSSVSRIFLIFEYVPNGTLRSWISEG-------HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD 620 (786)
Q Consensus 548 ~~~~~~~~~LV~Ey~~~GsL~~~l~~~-------~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld 620 (786)
.+..++|||||++|+|.+++... .....++|..+.+++.|+|+||.|||+. +|+||||||+|||+|
T Consensus 95 ----~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~---~ivHrDlk~~NiLld 167 (308)
T d1p4oa_ 95 ----GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVA 167 (308)
T ss_dssp ----SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEEC
T ss_pred ----CCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeeceEcCCceeec
Confidence 45689999999999999988632 1224579999999999999999999997 999999999999999
Q ss_pred CCCcccccCCCcccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHhCC-CCCCCchhHHHHHH
Q 003926 621 QNLVAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQ 696 (786)
Q Consensus 621 ~~~~~kl~DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~-~p~~~~~~~~~~~~ 696 (786)
+++++||+|||+++....... .....++..|+|||.+..+.++.++|||||||++|||+||. +|+...........
T Consensus 168 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~ 247 (308)
T d1p4oa_ 168 EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF 247 (308)
T ss_dssp TTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHH
T ss_pred CCceEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 999999999999975543322 12234678899999999999999999999999999999984 77766544333222
Q ss_pred HHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 697 LQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 697 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
+ ... .. +..+..++ ..+.+++.+||+.||++||||.||+++|+
T Consensus 248 i---~~~---~~-----~~~p~~~~----~~l~~li~~cl~~~P~~RPs~~~il~~L~ 290 (308)
T d1p4oa_ 248 V---MEG---GL-----LDKPDNCP----DMLFELMRMCWQYNPKMRPSFLEIISSIK 290 (308)
T ss_dssp H---HTT---CC-----CCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHG
T ss_pred H---HhC---CC-----CCCcccch----HHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 2 111 11 11112222 35778889999999999999999999885
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=3.9e-45 Score=381.04 Aligned_cols=257 Identities=18% Similarity=0.304 Sum_probs=197.8
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCC---hHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHS---TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~---~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|+..+.||+|+||+||+|+. .+|+.||||+++...... .+.|.+|++++++++|||||++++++... +...
T Consensus 7 drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~---~~~~ 83 (277)
T d1o6ya_ 7 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAE---TPAG 83 (277)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEE---CSSS
T ss_pred ceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeec---cCCC
Confidence 5688899999999999999995 579999999998654433 35699999999999999999999988652 2223
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
...|+|||||++|+|.+++... ..+++.+...++.|+++||+|||+. +||||||||+|||++.++..+++|||.
T Consensus 84 ~~~~lvmE~~~g~~L~~~~~~~---~~l~~~~~~~i~~qi~~al~~lH~~---~iiHrDiKP~NIll~~~~~~~l~d~~~ 157 (277)
T d1o6ya_ 84 PLPYIVMEYVDGVTLRDIVHTE---GPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGI 157 (277)
T ss_dssp EEEEEEEECCCEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTSCEEECCCTT
T ss_pred ceEEEEEECCCCCEehhhhccc---CCCCHHHHHHHHHHHHHHHHHHHhC---CccCccccCcccccCccccceeehhhh
Confidence 4589999999999999998753 3689999999999999999999997 999999999999999999999999999
Q ss_pred cccccccc----ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccc
Q 003926 633 PLLAENAE----KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESAR 708 (786)
Q Consensus 633 ~~~~~~~~----~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (786)
+....... ......|+..|+|||.+....|+.++|||||||++|||+||++||........... ......
T Consensus 158 ~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~---~~~~~~--- 231 (277)
T d1o6ya_ 158 ARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ---HVREDP--- 231 (277)
T ss_dssp CEECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH---HHHCCC---
T ss_pred hhhhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHH---HHhcCC---
Confidence 75442221 22345678899999999888899999999999999999999999986554332211 111110
Q ss_pred cccccccccccCcHHHHHHHHHHHHHhccCCCCCCC-CHHHHHHHHH
Q 003926 709 RSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERP-SVEDVLWNLQ 754 (786)
Q Consensus 709 ~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-t~~evl~~l~ 754 (786)
.......... ...+.+++.+||++||++|| |++|++..+.
T Consensus 232 --~~~~~~~~~~----s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~ 272 (277)
T d1o6ya_ 232 --IPPSARHEGL----SADLDAVVLKALAKNPENRYQTAAEMRADLV 272 (277)
T ss_dssp --CCGGGTSSSC----CHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred --CCCchhccCC----CHHHHHHHHHHccCCHhHCHhHHHHHHHHHH
Confidence 0000111111 23566788899999999999 7888887765
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=4.5e-45 Score=382.68 Aligned_cols=267 Identities=18% Similarity=0.263 Sum_probs=202.5
Q ss_pred cCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
++|+..+.||+|+||+||+|+.++|+.||||+++.... ...+.|.+|+.+|++++|||||++++++.. .+.
T Consensus 2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-------~~~ 74 (286)
T d1ob3a_ 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHT-------KKR 74 (286)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEEC-------SSC
T ss_pred CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeeccc-------CCc
Confidence 46888899999999999999998999999999976532 235789999999999999999999998875 456
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.+++|||+.++.+..+.... ..++......++.|++.||+|||+. +||||||||+|||++.++.+|++|||.+.
T Consensus 75 ~~i~~e~~~~~~~~~~~~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~IvHrDiKp~NIll~~~~~~kl~DfG~a~ 148 (286)
T d1ob3a_ 75 LVLVFEHLDQDLKKLLDVCE---GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLAR 148 (286)
T ss_dssp EEEEEECCSEEHHHHHHTST---TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHH
T ss_pred eeEEEEeehhhhHHHHHhhc---CCcchhhhHHHHHHHHHHHHHhccC---cEEecCCCCceeeEcCCCCEEecccccce
Confidence 89999999987777776542 4699999999999999999999997 99999999999999999999999999986
Q ss_pred ccccc-cccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHh-cccccccc
Q 003926 635 LAENA-EKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTA-DESARRSM 711 (786)
Q Consensus 635 ~~~~~-~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 711 (786)
..... .......++..|++||.+.. ..++.++||||+||++|||++|++||...........+...... ........
T Consensus 149 ~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 228 (286)
T d1ob3a_ 149 AFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNV 228 (286)
T ss_dssp HHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTG
T ss_pred ecccCccccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccch
Confidence 65332 22233456778999998765 45799999999999999999999999765443322222211111 10001000
Q ss_pred ------------ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 712 ------------VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 712 ------------~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
..+.............+.+++.+||+.||++|||++|+++|+||.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~Hp~f~ 285 (286)
T d1ob3a_ 229 TELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285 (286)
T ss_dssp GGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGG
T ss_pred hhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccC
Confidence 000000111112234667889999999999999999999998874
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-44 Score=381.97 Aligned_cols=268 Identities=20% Similarity=0.303 Sum_probs=200.8
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
++|+..+.||+|+||+||+|+. .+|+.||||+++.... ...+++.+|+++|++++|||||++++++.+ .+
T Consensus 2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~-------~~ 74 (298)
T d1gz8a_ 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT-------EN 74 (298)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEE-------TT
T ss_pred CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEecccccc-------cc
Confidence 5788999999999999999996 5799999999975542 235789999999999999999999999875 46
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..|+||||+.++ +.+++.... ...+++.....++.|++.||+|||+. +||||||||+|||++.++.+||+|||++
T Consensus 75 ~~~iv~e~~~~~-~~~~~~~~~-~~~l~e~~~~~~~~qil~~L~yLH~~---~IiHrDiKpeNIl~~~~~~~kl~DFG~a 149 (298)
T d1gz8a_ 75 KLYLVFEFLHQD-LKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 149 (298)
T ss_dssp EEEEEEECCSEE-HHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTHH
T ss_pred ceeEEEeecCCc-hhhhhhhhc-ccCCCHHHHHHHHHHHHHHHHHhhcC---CEEccccCchheeecccCcceeccCCcc
Confidence 799999999865 444443321 34699999999999999999999997 9999999999999999999999999999
Q ss_pred cccccc-cccccccccccccCccccccCC-CCcccceeehhHHHHHHHhCCCCCCCchhHH-HHHHHHHHHHhccccccc
Q 003926 634 LLAENA-EKVGHVIPYSGSIDPTNSARGK-LEEKIDIYDFGLILLEIIVGRPLKSRKEVDL-LKNQLQAVVTADESARRS 710 (786)
Q Consensus 634 ~~~~~~-~~~~~~~~~~~~~aPe~~~~~~-~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~ 710 (786)
+..... .......++..|+|||...... ++.++||||+||++|||++|+.||...+... +...........+.....
T Consensus 150 ~~~~~~~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 229 (298)
T d1gz8a_ 150 RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 229 (298)
T ss_dssp HHHCCCSBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTT
T ss_pred eeccCCcccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccc
Confidence 765432 2333456788999999866554 5889999999999999999999997654333 222222211111111111
Q ss_pred cc---c--c---cccccC----cHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 711 MV---D--P---AVNKAC----LDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 711 ~~---d--~---~~~~~~----~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
.. + + ...... .......+.+++.+||+.||++|||+.|+++|+||.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~ 287 (298)
T d1gz8a_ 230 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287 (298)
T ss_dssp GGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGT
T ss_pred cccccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhc
Confidence 00 0 0 000000 011224667888999999999999999999988864
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.2e-45 Score=386.22 Aligned_cols=255 Identities=20% Similarity=0.324 Sum_probs=202.9
Q ss_pred HhcCCCccCccCCCCCceeEEEEec------CCcEEEEEEecccCCC-ChHHHHHHHHHHhcC-CCCCcceeeeeeeecc
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKCH-STRNFMHHIELISKL-RHRHLVSALGHCFECY 546 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~ 546 (786)
..++|+..+.||+|+||.||+|++. +++.||||+++..... ...+|.+|+.+++++ +|||||+++|+|.+
T Consensus 21 ~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~-- 98 (311)
T d1t46a_ 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI-- 98 (311)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--
T ss_pred CHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEee--
Confidence 4567888899999999999999852 4679999999865432 345799999999999 69999999999875
Q ss_pred ccCCCCceEEEEEecCCCCChhHHhhcCC---------------CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccC
Q 003926 547 FDDSSVSRIFLIFEYVPNGTLRSWISEGH---------------AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNN 611 (786)
Q Consensus 547 ~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~---------------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrd 611 (786)
.+..++|||||++|+|.++++... ....+++..+..++.|||+||+|||+. +|||||
T Consensus 99 -----~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~---~ivHrD 170 (311)
T d1t46a_ 99 -----GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRD 170 (311)
T ss_dssp -----SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred -----CCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---Ceeecc
Confidence 356899999999999999997532 123589999999999999999999998 999999
Q ss_pred CCCCceeecCCCcccccCCCcccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCC
Q 003926 612 LKITDILLDQNLVAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSR 687 (786)
Q Consensus 612 lk~~NILld~~~~~kl~DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~ 687 (786)
|||+||+++.++.+|++|||+++....... .....++..|+|||.+..+.++.++|||||||++|||+| |++|+..
T Consensus 171 LKp~NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~ 250 (311)
T d1t46a_ 171 LAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG 250 (311)
T ss_dssp CSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred cccccccccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCC
Confidence 999999999999999999999976543322 223456788999999999999999999999999999999 6666655
Q ss_pred chh-HHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 688 KEV-DLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 688 ~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
... ..+...+.. . .+ +..+..+ ...+.+++.+||+.||++||||.||++.|+
T Consensus 251 ~~~~~~~~~~i~~----~---~~----~~~~~~~----~~~l~~Li~~cl~~dP~~RPs~~~il~~L~ 303 (311)
T d1t46a_ 251 MPVDSKFYKMIKE----G---FR----MLSPEHA----PAEMYDIMKTCWDADPLKRPTFKQIVQLIE 303 (311)
T ss_dssp CCSSHHHHHHHHH----T---CC----CCCCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCHHHHHHHHHhc----C---CC----CCCcccc----cHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 433 222222221 1 11 1111112 235678889999999999999999999886
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-44 Score=382.67 Aligned_cols=275 Identities=18% Similarity=0.263 Sum_probs=208.0
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cC-CcEEEEEEecccCC--CChHHHHHHHHHHhcC---CCCCcceeeeeeeecccc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KN-GTFVAIRCLKMKKC--HSTRNFMHHIELISKL---RHRHLVSALGHCFECYFD 548 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~-g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l---~H~NIv~l~g~~~~~~~~ 548 (786)
.++|+..+.||+|+||+||+|+. ++ ++.||||+++.... .....+.+|+++|+.+ +|||||+++++|.....
T Consensus 6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~- 84 (305)
T d1blxa_ 6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT- 84 (305)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC-
T ss_pred cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccc-
Confidence 46799999999999999999996 44 67899999975432 2344677888877765 89999999999864322
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCccccc
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKIS 628 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~ 628 (786)
......+++||||++|++....... ...+++.....++.|++.||+|||+. +||||||||+|||++.++.+||+
T Consensus 85 -~~~~~~~~~~e~~~~~~~~~~~~~~--~~~~~~~~~~~~~~qi~~aL~yLH~~---~ivHrDiKp~NILi~~~~~~kl~ 158 (305)
T d1blxa_ 85 -DRETKLTLVFEHVDQDLTTYLDKVP--EPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLA 158 (305)
T ss_dssp -SSEEEEEEEEECCSCBHHHHHHHSC--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred -ccCceEEEEEEeccCCchhhhhhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecCCCccEEEEcCCCCeeec
Confidence 1235789999999998776555432 34689999999999999999999998 99999999999999999999999
Q ss_pred CCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHH-HHHHHHHHHhcccc
Q 003926 629 SYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLL-KNQLQAVVTADESA 707 (786)
Q Consensus 629 DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~-~~~~~~~~~~~~~~ 707 (786)
|||+++............||..|+|||.+....|+.++||||+||++|||+||++||........ ..............
T Consensus 159 dfg~~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 238 (305)
T d1blxa_ 159 DFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEED 238 (305)
T ss_dssp SCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGG
T ss_pred chhhhhhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhc
Confidence 99998776555555667789999999999999999999999999999999999999987554332 22222221111111
Q ss_pred cccc-------c---cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 708 RRSM-------V---DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 708 ~~~~-------~---d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.... . .+.............+.+++.+||+.||++|||+.|+++|+||..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~ 298 (305)
T d1blxa_ 239 WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD 298 (305)
T ss_dssp SCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTT
T ss_pred ccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhcC
Confidence 1000 0 000000111112235667888999999999999999999998753
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.7e-44 Score=383.85 Aligned_cols=273 Identities=19% Similarity=0.255 Sum_probs=200.5
Q ss_pred CCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEE
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~ 556 (786)
+|+..++||+|+||+||+|+.. +|+.||||+++.... .+.+|+++|++++|||||++++++...... ....+.+
T Consensus 21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~-~~~~~~~ 95 (350)
T d1q5ka_ 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEK-KDEVYLN 95 (350)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----SCCHHHHHHHHCCCTTBCCEEEEEEEC--C-CSCCEEE
T ss_pred CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch----HHHHHHHHHHhcCCCCCCcEEEEEEecCcc-CCceEEE
Confidence 4667789999999999999965 699999999976432 234799999999999999999998653221 2245689
Q ss_pred EEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC-cccccCCCcccc
Q 003926 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL-VAKISSYNLPLL 635 (786)
Q Consensus 557 LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~-~~kl~DfGl~~~ 635 (786)
+|||||++|.+..+.+.......+++.++..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||+++.
T Consensus 96 lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~---~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~ 172 (350)
T d1q5ka_ 96 LVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172 (350)
T ss_dssp EEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTTCCEEECCCTTCEE
T ss_pred EEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhc---CCcccCCCcceEEEecCCCceeEecccchhh
Confidence 9999998765444433222235699999999999999999999997 999999999999999775 899999999976
Q ss_pred cccccccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhH-HHHHHHHHHHHhccccc-----
Q 003926 636 AENAEKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVD-LLKNQLQAVVTADESAR----- 708 (786)
Q Consensus 636 ~~~~~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~----- 708 (786)
...........++..|+|||.... ..|+.++||||+||++|||++|++||...... .+...............
T Consensus 173 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~ 252 (350)
T d1q5ka_ 173 LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 252 (350)
T ss_dssp CCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC
T ss_pred ccCCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhcc
Confidence 655544555677889999998654 46899999999999999999999999765432 22222221110000000
Q ss_pred --cccccccc-----cccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 709 --RSMVDPAV-----NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 709 --~~~~d~~~-----~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
....-+.. ...........+.+++.+||+.||++|||+.|+++|+||.+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~ 309 (350)
T d1q5ka_ 253 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309 (350)
T ss_dssp ---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred chhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccc
Confidence 00000000 000111123356788899999999999999999999998653
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.7e-44 Score=372.36 Aligned_cols=245 Identities=17% Similarity=0.245 Sum_probs=196.7
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCC------ChHHHHHHHHHHhcCC--CCCcceeeeeeeeccc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCH------STRNFMHHIELISKLR--HRHLVSALGHCFECYF 547 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~------~~~~f~~E~~~l~~l~--H~NIv~l~g~~~~~~~ 547 (786)
++|+..+.||+|+||+||+|+. .+|+.||||+++..... ....+.+|+++|++++ |||||++++++..
T Consensus 4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~--- 80 (273)
T d1xwsa_ 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER--- 80 (273)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC---
T ss_pred CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEee---
Confidence 4688899999999999999996 47999999999754322 1244789999999986 9999999998865
Q ss_pred cCCCCceEEEEEecCCC-CChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCC-Ccc
Q 003926 548 DDSSVSRIFLIFEYVPN-GTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN-LVA 625 (786)
Q Consensus 548 ~~~~~~~~~LV~Ey~~~-GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~-~~~ 625 (786)
.+..++||||+.+ +++.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.+ +.+
T Consensus 81 ----~~~~~lv~e~~~~~~~l~~~~~~~---~~l~e~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NIll~~~~~~v 150 (273)
T d1xwsa_ 81 ----PDSFVLILERPEPVQDLFDFITER---GALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGEL 150 (273)
T ss_dssp ----SSEEEEEEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEE
T ss_pred ----CCeEEEEEEeccCcchHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCccccCcccceEEecCCCeE
Confidence 4678999999976 6888888753 3689999999999999999999997 99999999999999854 799
Q ss_pred cccCCCcccccccccccccccccccccCccccccCCC-CcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhc
Q 003926 626 KISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704 (786)
Q Consensus 626 kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~-t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 704 (786)
||+|||+++..... ......||..|+|||.+....+ +.++||||+||++|||+||+.||...+. .. . .
T Consensus 151 kl~DFG~a~~~~~~-~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~-----i~----~-~ 219 (273)
T d1xwsa_ 151 KLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-----II----R-G 219 (273)
T ss_dssp EECCCTTCEECCSS-CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-----HH----H-C
T ss_pred EECccccceecccc-cccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchH-----Hh----h-c
Confidence 99999999765433 2334568889999999877665 5779999999999999999999975321 00 0 0
Q ss_pred cccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 705 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
. ....+ ..+ .++.+++.+||+.||++|||++|+++|+|+.+
T Consensus 220 ~----~~~~~----~~s----~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~ 260 (273)
T d1xwsa_ 220 Q----VFFRQ----RVS----SECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260 (273)
T ss_dssp C----CCCSS----CCC----HHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSS
T ss_pred c----cCCCC----CCC----HHHHHHHHHHccCCHhHCcCHHHHhcCHhhCC
Confidence 0 00111 122 34667888999999999999999999998753
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-42 Score=370.38 Aligned_cols=275 Identities=15% Similarity=0.243 Sum_probs=200.6
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeecccc-CCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFD-DSS 551 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~-~~~ 551 (786)
.++|+..+.||+|+||+||+|+. ++|+.||||++..... ...+++.+|+++|++++||||+++++++...... ...
T Consensus 9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~ 88 (318)
T d3blha1 9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 88 (318)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence 36788899999999999999996 5799999999875533 3457899999999999999999999988642210 112
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
....|+|||||+++.+..+... ...++......++.|+++||.|||+. +|+||||||+|||++.++.+|++|||
T Consensus 89 ~~~~~iv~e~~~~~~~~~~~~~---~~~~~~~~~~~i~~qil~~l~~lH~~---~ivHrDlKp~NILl~~~~~~kl~dfg 162 (318)
T d3blha1 89 KGSIYLVFDFCEHDLAGLLSNV---LVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFG 162 (318)
T ss_dssp --CEEEEEECCCEEHHHHHTCT---TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCT
T ss_pred CceEEEEEeccCCCccchhhhc---ccccccHHHHHHHHHHHHHHHHhccC---CEEecCcCchheeecCCCcEEeeecc
Confidence 3568999999998877655443 23578888999999999999999997 99999999999999999999999999
Q ss_pred ccccccccc-----ccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcc
Q 003926 632 LPLLAENAE-----KVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADE 705 (786)
Q Consensus 632 l~~~~~~~~-----~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 705 (786)
+++...... ......++..|+|||.+... .|+.|+||||+||++|||++|++||...........+........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~ 242 (318)
T d3blha1 163 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 242 (318)
T ss_dssp TCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred eeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 986543221 12234578899999987654 589999999999999999999999986554433333333221111
Q ss_pred ccc-ccccc---------ccccccCcHHH------HHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 706 SAR-RSMVD---------PAVNKACLDES------LKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 706 ~~~-~~~~d---------~~~~~~~~~~~------~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
... ..... .........+. ...+.+++.+||+.||++|||++|+++|+||.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~ 309 (318)
T d3blha1 243 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFW 309 (318)
T ss_dssp TTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGS
T ss_pred hhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChhhc
Confidence 110 00000 00000111111 23566889999999999999999999999874
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=100.00 E-value=1.1e-42 Score=369.64 Aligned_cols=289 Identities=30% Similarity=0.450 Sum_probs=215.8
Q ss_pred cCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCC--CCCCCCccEEeCC----CCEEEEEeCCCCCCCCCCCCCcCCccc
Q 003926 27 QLQSSQAQTLLRIQGLLNNPAVLSSWNITTEFCN--TEPTSSLTVVCYE----ESITQLHIVGNKRAPMLPLSFSMDSFV 100 (786)
Q Consensus 27 ~~~~~~~~~ll~~k~~~~~~~~l~~W~~~~~~C~--w~~~~~~~v~c~~----~~v~~l~l~~~~~~~~l~~~~~~~~~~ 100 (786)
-|.++|++||++||+.+.+|..+++|..++|||. |. ||+|+. .+|++|+|+++.+.|.. .+|
T Consensus 2 ~c~~~e~~aLl~~k~~~~~~~~l~sW~~~~d~C~~~w~-----gv~C~~~~~~~~v~~L~L~~~~l~g~~-------~lp 69 (313)
T d1ogqa_ 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWL-----GVLCDTDTQTYRVNNLDLSGLNLPKPY-------PIP 69 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTTTTCST-----TEEECCSSSCCCEEEEEEECCCCSSCE-------ECC
T ss_pred CCCHHHHHHHHHHHHHCCCCCcCCCCCCCCCCCCCcCC-----CeEEeCCCCcEEEEEEECCCCCCCCCC-------CCC
Confidence 4899999999999999999888999998899995 77 699963 37999999998877632 245
Q ss_pred cccCCCCCCCEEEccC-CCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCC
Q 003926 101 TTLVKLPDLKVLRLVS-LGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLP 179 (786)
Q Consensus 101 ~~l~~l~~L~~L~L~~-n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 179 (786)
..+++|++|++|+|++ |++.|.+|..|++|++|++|+|++|++.+..|..+..+.+|+.+++++|.+.+.+|..+++++
T Consensus 70 ~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~ 149 (313)
T d1ogqa_ 70 SSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLP 149 (313)
T ss_dssp GGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCT
T ss_pred hHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhccCc
Confidence 6888999999999987 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEccCCcCcccCCccccCCCCC-CEEEccCCcCCcCCCC-CCCCCcCCEEEcccCCCCCCCCccc---cchhhhhc
Q 003926 180 ILAVLSLRNNMFNGTLPDSFSYLENL-RVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKVG---KKLVTMIL 254 (786)
Q Consensus 180 ~L~~L~Ls~N~l~~~~p~~~~~l~~L-~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~p~~~---~~L~~L~l 254 (786)
+|+.+++++|.+.|.+|..+..+.++ +.+++++|++++..|. +..+ .+..+++++|.+.+.+|... .+++.+++
T Consensus 150 ~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l-~~~~l~l~~~~~~~~~~~~~~~~~~l~~l~~ 228 (313)
T d1ogqa_ 150 NLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHL 228 (313)
T ss_dssp TCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGC-CCSEEECCSSEEEECCGGGCCTTSCCSEEEC
T ss_pred ccceeecccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccc
Confidence 99999999999999999999888776 8899999999988775 4443 34467776666554444321 33444445
Q ss_pred cCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCc
Q 003926 255 SKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNL 330 (786)
Q Consensus 255 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~ 330 (786)
++|.+++.+| .++.+++|+.|+|++|+|+|.+|+.|+++++|++|+|++|+|+|.+|. ++.+++|+.+++++|+
T Consensus 229 ~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~-~~~L~~L~~l~l~~N~ 302 (313)
T d1ogqa_ 229 AKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ-GGNLQRFDVSAYANNK 302 (313)
T ss_dssp CSSEECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC-STTGGGSCGGGTCSSS
T ss_pred cccccccccc-ccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCC-cccCCCCCHHHhCCCc
Confidence 5555544333 344444455555555555555555555555555555555555544442 3344444444444443
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-42 Score=373.19 Aligned_cols=272 Identities=17% Similarity=0.246 Sum_probs=198.5
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
+.|+..+.||+|+||+||+|+. .+|+.||||+++.... ...+.+++|+++|++++|||||++++++....+. ...
T Consensus 8 ~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~---~~~ 84 (345)
T d1pmea_ 8 PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIE---QMK 84 (345)
T ss_dssp TTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTT---TCC
T ss_pred CCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeecccc---ccc
Confidence 4588889999999999999985 5799999999975442 2346799999999999999999999998653221 122
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++++||+.+|+|.+++... .+++.....++.|++.||+|||+. +||||||||+|||++.++.+||+|||+++
T Consensus 85 ~~~l~~~~~~g~L~~~l~~~----~l~~~~i~~i~~qil~al~yLH~~---~iiHRDIKp~NILl~~~~~~kl~DfG~a~ 157 (345)
T d1pmea_ 85 DVYLVTHLMGADLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR 157 (345)
T ss_dssp CEEEEEECCCEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred eEEEEEeecCCchhhhhhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCcceEEECCCCCEEEcccCcee
Confidence 34555667799999999753 589999999999999999999998 99999999999999999999999999986
Q ss_pred ccccccc----cccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcc-ccc
Q 003926 635 LAENAEK----VGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADE-SAR 708 (786)
Q Consensus 635 ~~~~~~~----~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~-~~~ 708 (786)
....... .....++..|+|||.+.. ..++.++||||+||++|||++|++||.................... ...
T Consensus 158 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 237 (345)
T d1pmea_ 158 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 237 (345)
T ss_dssp ECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHH
T ss_pred eccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhh
Confidence 5533221 234457788999998744 4578999999999999999999999976544332222211111100 000
Q ss_pred ccc----------cccccccc----CcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 709 RSM----------VDPAVNKA----CLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 709 ~~~----------~d~~~~~~----~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
... ..+..... .......++.+++.+||+.||++|||+.|+++|+|+.+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~ 301 (345)
T d1pmea_ 238 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 301 (345)
T ss_dssp HTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTT
T ss_pred hhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccC
Confidence 000 00000000 001112356789999999999999999999999987643
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-42 Score=372.11 Aligned_cols=270 Identities=15% Similarity=0.226 Sum_probs=198.0
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.+.|+..+.||+|+||+||+|+. .+|+.||||+++..... ..+.+.+|+++|++++|||||+++++|...... ...
T Consensus 17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~-~~~ 95 (346)
T d1cm8a_ 17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETL-DDF 95 (346)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSST-TTC
T ss_pred CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccc-ccc
Confidence 35688889999999999999995 46999999999754332 245789999999999999999999998652211 123
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
.+.|+||||| +++|..+++. ..+++.....++.|++.||+|||+. +||||||||+|||++.++.+|++|||+
T Consensus 96 ~~~~lv~e~~-~~~l~~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~---~IiHrDiKp~NIL~~~~~~~kl~Dfg~ 167 (346)
T d1cm8a_ 96 TDFYLVMPFM-GTDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGL 167 (346)
T ss_dssp CCCEEEEECC-SEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEecc-cccHHHHHHh----ccccHHHHHHHHHHHHHHHHHHHhC---CCcccccCcchhhcccccccccccccc
Confidence 4579999999 5688887764 3599999999999999999999998 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccc----
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESA---- 707 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~---- 707 (786)
++..... .....++..|+|||.+.+ ..++.++||||+||++|||++|++||...+..................
T Consensus 168 a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (346)
T d1cm8a_ 168 ARQADSE--MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQR 245 (346)
T ss_dssp CEECCSS--CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHT
T ss_pred eeccCCc--cccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhh
Confidence 9765432 234567788999998765 457899999999999999999999997654433222221111100000
Q ss_pred ------------ccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 708 ------------RRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 708 ------------~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
........ ...........+.+++.+||+.||++|||+.|+++|+||..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~ 306 (346)
T d1cm8a_ 246 LQSDEAKNYMKGLPELEKKD-FASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFES 306 (346)
T ss_dssp CSCHHHHHHHHHSCCCCCCC-GGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTT
T ss_pred hcchhhhhhhccCCcccccc-hHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCc
Confidence 00000000 00111112235678889999999999999999999999864
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=3.3e-42 Score=368.22 Aligned_cols=264 Identities=13% Similarity=0.185 Sum_probs=200.6
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCC-CCCcceeeeeeeeccccCCCCce
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLR-HRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
++|+..+.||+|+||+||+|+. .+|+.||||+++.. ..+++.+|+++|++++ ||||+++++++.. .....
T Consensus 35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~-----~~~~~ 106 (328)
T d3bqca1 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKD-----PVSRT 106 (328)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEEEEEEC-----TTTCS
T ss_pred cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH---HHHHHHHHHHHHHhccCCCCCcEEEEEEEe-----cCCCc
Confidence 5788999999999999999996 57999999998643 3578999999999995 9999999998753 12356
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC-cccccCCCcc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL-VAKISSYNLP 633 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~-~~kl~DfGl~ 633 (786)
.++|||||++|+|..+.+ .++......++.|++.||+|||+. +||||||||+|||++.++ .+||+|||++
T Consensus 107 ~~~v~e~~~~~~L~~~~~------~l~e~~i~~i~~qil~aL~~LH~~---gIvHrDiKp~NILi~~~~~~vkl~DFG~a 177 (328)
T d3bqca1 107 PALVFEHVNNTDFKQLYQ------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLA 177 (328)
T ss_dssp EEEEEECCCSCBGGGTTT------SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCGGGC
T ss_pred eeEEEeecCCCcHHHHhc------CCCHHHHHHHHHHHHHHHHHHhhc---ccccccccccceEEcCCCCeeeecccccc
Confidence 899999999999987642 489999999999999999999998 999999999999998654 6899999999
Q ss_pred cccccccccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCchh--HHHHHHHHHHH--------H
Q 003926 634 LLAENAEKVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRKEV--DLLKNQLQAVV--------T 702 (786)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~~~--~~~~~~~~~~~--------~ 702 (786)
+............++..|+|||..... .++.++||||+||++|||++|+.||..... +.......... .
T Consensus 178 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~ 257 (328)
T d3bqca1 178 EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 257 (328)
T ss_dssp EECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHH
T ss_pred eeccCCCcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhh
Confidence 776655555556678889999987654 479999999999999999999999865322 11111111000 0
Q ss_pred hc----cccccccc--------cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 703 AD----ESARRSMV--------DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 703 ~~----~~~~~~~~--------d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.. ........ ..............++.+++.+||+.||++|||++|+++|+||..
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~ 324 (328)
T d3bqca1 258 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYT 324 (328)
T ss_dssp HTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred hcccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCC
Confidence 00 00000000 000000011122345778899999999999999999999999864
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.5e-42 Score=359.90 Aligned_cols=267 Identities=19% Similarity=0.256 Sum_probs=202.4
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
++|+..+.||+|+||+||+|+. .+|+.||||+++..... ..+++.+|+++|++++|||||++++++.. ..
T Consensus 2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~-------~~ 74 (292)
T d1unla_ 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS-------DK 74 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEC-------SS
T ss_pred CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeecccccc-------cc
Confidence 4688899999999999999996 57999999999755432 35789999999999999999999999875 45
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++|+||+.+++|..++... ..+++..+..++.|++.||+|||+. +||||||||+|||++.++.+|++|||.+
T Consensus 75 ~~~iv~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~q~~~aL~~lH~~---~IvHrDiKP~NIli~~~~~~kl~DFG~a 148 (292)
T d1unla_ 75 KLTLVFEFCDQDLKKYFDSCN---GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLA 148 (292)
T ss_dssp EEEEEEECCSEEHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTC
T ss_pred ceeEEeeeccccccccccccc---cccchhHHHHHHHHHHHHHHHhhcC---CEeeecccCcccccccCCceeeeecchh
Confidence 789999999999998888753 4688999999999999999999998 9999999999999999999999999999
Q ss_pred cccccccc-cccccccccccCccccccCC-CCcccceeehhHHHHHHHhCCCCC-CCchhHHHHHHHHHHHHhc-ccccc
Q 003926 634 LLAENAEK-VGHVIPYSGSIDPTNSARGK-LEEKIDIYDFGLILLEIIVGRPLK-SRKEVDLLKNQLQAVVTAD-ESARR 709 (786)
Q Consensus 634 ~~~~~~~~-~~~~~~~~~~~aPe~~~~~~-~t~ksDVwSfGvvl~ElltG~~p~-~~~~~~~~~~~~~~~~~~~-~~~~~ 709 (786)
+....... .....++..+++||.+.... ++.++||||+||++|||++|+.|+ ...+.......+....... +....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (292)
T d1unla_ 149 RAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWP 228 (292)
T ss_dssp EECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCT
T ss_pred hcccCCCccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhh
Confidence 76543322 22334556788899876554 689999999999999999999875 3333333322222221111 00000
Q ss_pred c---ccc----c-----cccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 710 S---MVD----P-----AVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 710 ~---~~d----~-----~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
. ..+ + .............+.+++.+||+.||.+|||++||++|+||.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~ 287 (292)
T d1unla_ 229 SMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287 (292)
T ss_dssp TGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGS
T ss_pred hhhhcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcChhhc
Confidence 0 000 0 000011112234567888899999999999999999998874
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-42 Score=365.66 Aligned_cols=256 Identities=18% Similarity=0.308 Sum_probs=199.6
Q ss_pred cCCCccCccCCCCCceeEEEEec----CCcEEEEEEecccC----CCChHHHHHHHHHHhcCCC-CCcceeeeeeeeccc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK----NGTFVAIRCLKMKK----CHSTRNFMHHIELISKLRH-RHLVSALGHCFECYF 547 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~----~~~~~~f~~E~~~l~~l~H-~NIv~l~g~~~~~~~ 547 (786)
++|+..+.||+|+||+||+|+.. +|+.||||+++... ....+.+.+|++++++++| |||+++++++..
T Consensus 24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~--- 100 (322)
T d1vzoa_ 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT--- 100 (322)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE---
T ss_pred hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeecc---
Confidence 56889999999999999999842 48999999987542 2345678999999999976 899999998765
Q ss_pred cCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccc
Q 003926 548 DDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKI 627 (786)
Q Consensus 548 ~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl 627 (786)
....++|||||.+|+|.+++.... .+.......++.|++.||+|+|+. +||||||||+|||+|.++.+||
T Consensus 101 ----~~~~~~v~e~~~~~~L~~~i~~~~---~~~e~~~~~~~~Qi~~al~~lH~~---~ivHrDiKp~Nill~~~~~vkL 170 (322)
T d1vzoa_ 101 ----ETKLHLILDYINGGELFTHLSQRE---RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVL 170 (322)
T ss_dssp ----TTEEEEEECCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEE
T ss_pred ----CCceeeeeecccccHHHHHHHhcc---cccHHHHHHHHHHHHHHHHHhhcC---CEEeccCCccceeecCCCCEEE
Confidence 456899999999999999997642 467788888999999999999997 9999999999999999999999
Q ss_pred cCCCcccccccc--cccccccccccccCccccccC--CCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHh
Q 003926 628 SSYNLPLLAENA--EKVGHVIPYSGSIDPTNSARG--KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTA 703 (786)
Q Consensus 628 ~DfGl~~~~~~~--~~~~~~~~~~~~~aPe~~~~~--~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~ 703 (786)
+|||+++..... .......++..|++||..... .++.++|||||||+||||+||+.||...........+......
T Consensus 171 ~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~ 250 (322)
T d1vzoa_ 171 TDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK 250 (322)
T ss_dssp SCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHH
T ss_pred eeccchhhhcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhccc
Confidence 999998654322 223345677889999987654 4788999999999999999999999765432222222111111
Q ss_pred ccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHHHHHHH
Q 003926 704 DESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERP-----SVEDVLWNLQFAA 757 (786)
Q Consensus 704 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~~l~~~~ 757 (786)
.. +..+.. ....+.+++.+||++||++|| |++|+++|+||.+
T Consensus 251 ~~--------~~~~~~----~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~ 297 (322)
T d1vzoa_ 251 SE--------PPYPQE----MSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK 297 (322)
T ss_dssp CC--------CCCCTT----SCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTT
T ss_pred CC--------CCCccc----CCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcC
Confidence 10 111111 224567788899999999999 5899999999864
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-41 Score=367.02 Aligned_cols=271 Identities=17% Similarity=0.182 Sum_probs=196.3
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
+.|+..+.||+|+||+||+|+.. +|+.||||++...... ..+.+.+|+.++++++|||||++++++...... ....
T Consensus 17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~-~~~~ 95 (355)
T d2b1pa1 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL-EEFQ 95 (355)
T ss_dssp TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCST-TTCC
T ss_pred CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEeccccc-ccCc
Confidence 56888999999999999999965 6999999999765432 235689999999999999999999988642211 1246
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..|+|||||.+|.+ +.+. ..+++.....++.|++.||.|||+. +|+||||||+|||++.++.+|++|||++
T Consensus 96 ~~~iv~Ey~~~~l~-~~~~-----~~~~~~~i~~~~~qil~gl~~LH~~---giiHrDlKP~Nil~~~~~~~kl~df~~~ 166 (355)
T d2b1pa1 96 DVYLVMELMDANLC-QVIQ-----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA 166 (355)
T ss_dssp EEEEEEECCSEEHH-HHHT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-
T ss_pred eeEEEEeccchHHH-Hhhh-----cCCCHHHHHHHHHHHHHHHHHhhhc---ccccccCCccccccccccceeeechhhh
Confidence 78999999976544 4443 2489999999999999999999998 9999999999999999999999999998
Q ss_pred cccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHH-hccccc----
Q 003926 634 LLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVT-ADESAR---- 708 (786)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~-~~~~~~---- 708 (786)
+............++..|+|||.+.+..++.++||||+||++|||++|++||...+.......+..... .....+
T Consensus 167 ~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 246 (355)
T d2b1pa1 167 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 246 (355)
T ss_dssp --------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSC
T ss_pred hccccccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhh
Confidence 766555555556778899999999888999999999999999999999999976543332222111110 000000
Q ss_pred ------------------ccccccccc---ccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 709 ------------------RSMVDPAVN---KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 709 ------------------~~~~d~~~~---~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
......... ..........+.+++.+||+.||++|||++||++|+|+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~ 316 (355)
T d2b1pa1 247 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 316 (355)
T ss_dssp HHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred hhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCC
Confidence 000000000 0112234567889999999999999999999999999864
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-41 Score=364.57 Aligned_cols=271 Identities=14% Similarity=0.191 Sum_probs=199.7
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.+.|+..+.||+|+||+||+|+. .+|+.||||+++..... ..+.+.+|+++|++++|||||++++++...... ..
T Consensus 17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~--~~ 94 (348)
T d2gfsa1 17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSL--EE 94 (348)
T ss_dssp ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSST--TT
T ss_pred CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeecccc--cc
Confidence 45688899999999999999995 57999999999865432 235789999999999999999999987542111 12
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
...++++||+.+|+|.+++.. ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+|++|||+
T Consensus 95 ~~~~~i~~~~~gg~L~~~~~~----~~l~e~~~~~i~~qil~aL~~LH~~---giiHrDiKp~NILi~~~~~~kl~dfg~ 167 (348)
T d2gfsa1 95 FNDVYLVTHLMGADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGL 167 (348)
T ss_dssp CCCCEEEEECCSEEHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCC--
T ss_pred CceEEEEEeecCCchhhhccc----ccccHHHHHHHHHHHHHHHHHHHhC---CCcccccCCccccccccccccccccch
Confidence 334677888899999999964 2599999999999999999999998 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
+...... .....++..|+|||..... .++.++||||+||++|||++|++||...+.......+..............
T Consensus 168 a~~~~~~--~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~ 245 (348)
T d2gfsa1 168 ARHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 245 (348)
T ss_dssp --CCTGG--GSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTT
T ss_pred hcccCcc--cccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhh
Confidence 8655332 2334567789999986554 468999999999999999999999987654433333222211110000000
Q ss_pred c-----------cccccccC----cHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 712 V-----------DPAVNKAC----LDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 712 ~-----------d~~~~~~~----~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
. -+...... .......+.+++.+||+.||++|||+.|+++|+||.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~ 306 (348)
T d2gfsa1 246 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306 (348)
T ss_dssp CCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred ccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCC
Confidence 0 00000000 0112245678889999999999999999999998764
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.3e-40 Score=349.03 Aligned_cols=256 Identities=12% Similarity=0.144 Sum_probs=190.4
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
+.|+..+.||+|+||+||+|+. .+|+.||||++.... ..+++.+|++++++++|+|+|..++.|.. ..+..
T Consensus 7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~i~~~l~~~~~i~~~~~~~~------~~~~~ 78 (299)
T d1ckia_ 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGA------EGDYN 78 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT--TSCCHHHHHHHHHHSTTSTTCCCEEEEEE------ETTEE
T ss_pred CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc--cCHHHHHHHHHHHHccCCCcccEEEEEEe------cCCEE
Confidence 3588899999999999999996 568999999887543 23458899999999998888777776654 14578
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeec---CCCcccccCCCc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD---QNLVAKISSYNL 632 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld---~~~~~kl~DfGl 632 (786)
++||||+. |++.+.+... ...+++..+..++.|+++||+|||+. +||||||||+|||++ .+..+|++|||+
T Consensus 79 ~ivme~~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~ 152 (299)
T d1ckia_ 79 VMVMELLG-PSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGL 152 (299)
T ss_dssp EEEEECCC-CBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCSS
T ss_pred EEEEEEcC-Cchhhhhhhc--cCCCcHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHhhccccccCCCceeeeeccCc
Confidence 99999995 5676666543 24689999999999999999999997 999999999999875 455799999999
Q ss_pred cccccccc--------ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhc
Q 003926 633 PLLAENAE--------KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704 (786)
Q Consensus 633 ~~~~~~~~--------~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 704 (786)
++...... ......|+..|+|||...+..++.++|||||||++|||+||+.||...........+.......
T Consensus 153 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~ 232 (299)
T d1ckia_ 153 AKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKK 232 (299)
T ss_dssp CEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHH
T ss_pred ceeccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhccc
Confidence 97654322 1234468889999999988889999999999999999999999997644332222221111110
Q ss_pred cccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 705 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
. ....+.....++ .++.+++.+||+.+|++||++.++.+.++
T Consensus 233 ~----~~~~~~~~~~~p----~~~~~li~~cl~~~p~~RP~~~~i~~~l~ 274 (299)
T d1ckia_ 233 M----STPIEVLCKGYP----SEFATYLNFCRSLRFDDKPDYSYLRQLFR 274 (299)
T ss_dssp H----HSCHHHHTTTSC----HHHHHHHHHHHHSCTTCCCCHHHHHHHHH
T ss_pred C----CCChhHhccCCC----HHHHHHHHHHccCChhHCcCHHHHHHHHH
Confidence 0 000011112222 35667888999999999999987765443
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=1.6e-39 Score=340.80 Aligned_cols=255 Identities=10% Similarity=0.092 Sum_probs=194.7
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCC-CCcceeeeeeeeccccCCCCce
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRH-RHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H-~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
++|++.+.||+|+||+||+|+.. +|+.||||++.... ....+.+|+++++.++| +||+.+++++.+ ...
T Consensus 5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~-------~~~ 75 (293)
T d1csna_ 5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQE-------GLH 75 (293)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEE-------TTE
T ss_pred CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc--CcHHHHHHHHHHHHhcCCCCCCEEEEEeec-------CCc
Confidence 46888999999999999999954 69999999886543 23457889999999975 899999988765 456
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC-----CCcccccC
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ-----NLVAKISS 629 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~-----~~~~kl~D 629 (786)
.++||||+ +|+|.+++.... ..+++.+...++.|++.||+|||+. +|+||||||+|||++. ++.+||+|
T Consensus 76 ~~~vme~~-~~~l~~~~~~~~--~~~~~~~~~~i~~q~~~~l~~lH~~---giiHrDiKp~Nili~~~~~~~~~~vkl~D 149 (293)
T d1csna_ 76 NVLVIDLL-GPSLEDLLDLCG--RKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVD 149 (293)
T ss_dssp EEEEEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECC
T ss_pred cEEEEEec-CCCHHHHHHhhc--cchhhHHHHHHHHHHHHHHHHHHHC---CceeccCCccceeecCcccccCCceEEcc
Confidence 89999999 689999987532 3689999999999999999999998 9999999999999975 56799999
Q ss_pred CCccccccccc--------ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHH
Q 003926 630 YNLPLLAENAE--------KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVV 701 (786)
Q Consensus 630 fGl~~~~~~~~--------~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~ 701 (786)
||+++...... ......||..|+|||.+....++.++|||||||++|||+||+.||................
T Consensus 150 FG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~ 229 (293)
T d1csna_ 150 FGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIG 229 (293)
T ss_dssp CTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHH
T ss_pred cceeEEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHH
Confidence 99997653221 1234568899999999988889999999999999999999999997543221111111111
Q ss_pred HhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 702 TADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 702 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
..... ..-+.+...++ .++.+++..|++.+|++||+++.+.+.+.
T Consensus 230 ~~~~~----~~~~~l~~~~p----~~l~~ii~~~~~~~~~~rP~y~~l~~~l~ 274 (293)
T d1csna_ 230 EKKQS----TPLRELCAGFP----EEFYKYMHYARNLAFDATPDYDYLQGLFS 274 (293)
T ss_dssp HHHHH----SCHHHHTTTSC----HHHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred hccCC----CChHHhcCCCC----HHHHHHHHHHhcCCcccCcCHHHHHHHHH
Confidence 10000 00011112223 34667788999999999999988876654
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2e-36 Score=327.97 Aligned_cols=269 Identities=13% Similarity=0.161 Sum_probs=193.0
Q ss_pred CCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCC-----------CCCcceeeeeeeecc
Q 003926 479 FDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLR-----------HRHLVSALGHCFECY 546 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-----------H~NIv~l~g~~~~~~ 546 (786)
|+..+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|++++++++ |+|||++++++...
T Consensus 15 Y~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~- 92 (362)
T d1q8ya_ 15 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK- 92 (362)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE-
T ss_pred EEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec-
Confidence 78899999999999999996 579999999997543 22467889999988875 57899999887542
Q ss_pred ccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCc--
Q 003926 547 FDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV-- 624 (786)
Q Consensus 547 ~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~-- 624 (786)
.....+++|+++..+..............+++.....++.|+++||+|||+. .+|+||||||+|||++.++.
T Consensus 93 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~--~~IvHrDlKp~NIll~~~~~~~ 166 (362)
T d1q8ya_ 93 ----GPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRR--CGIIHTDIKPENVLMEIVDSPE 166 (362)
T ss_dssp ----ETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHT--TCEECSCCSGGGEEEEEEETTT
T ss_pred ----cccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhh--cCcccccCChhHeeeeccCccc
Confidence 1345677777776665444333223345688899999999999999999973 28999999999999986653
Q ss_pred ----ccccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhH-------HH
Q 003926 625 ----AKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVD-------LL 693 (786)
Q Consensus 625 ----~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~-------~~ 693 (786)
+|++|||.+...... .....++..|+|||......|+.++||||+||+++||++|+.||...+.. .+
T Consensus 167 ~~~~~kl~dfg~s~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~ 244 (362)
T d1q8ya_ 167 NLIQIKIADLGNACWYDEH--YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHI 244 (362)
T ss_dssp TEEEEEECCCTTCEETTBC--CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHH
T ss_pred ccceeeEeecccccccccc--cccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHH
Confidence 899999998654332 23456788899999998889999999999999999999999998643211 11
Q ss_pred HHHHHHHHHhccc----------------ccccccccc---------ccccCcHHHHHHHHHHHHHhccCCCCCCCCHHH
Q 003926 694 KNQLQAVVTADES----------------ARRSMVDPA---------VNKACLDESLKTMMEVCVRCLLKNPAERPSVED 748 (786)
Q Consensus 694 ~~~~~~~~~~~~~----------------~~~~~~d~~---------~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~e 748 (786)
...+......... ....+.... ............+.+++.+|++.||.+|||++|
T Consensus 245 ~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e 324 (362)
T d1q8ya_ 245 AQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGG 324 (362)
T ss_dssp HHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHH
T ss_pred HHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHH
Confidence 1111110000000 000000000 011123456678899999999999999999999
Q ss_pred HHHHHHHHH
Q 003926 749 VLWNLQFAA 757 (786)
Q Consensus 749 vl~~l~~~~ 757 (786)
+++|+||.+
T Consensus 325 ~L~Hp~f~~ 333 (362)
T d1q8ya_ 325 LVNHPWLKD 333 (362)
T ss_dssp HHTCGGGTT
T ss_pred HhcCcccCC
Confidence 999998873
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.97 E-value=5.5e-32 Score=286.62 Aligned_cols=249 Identities=26% Similarity=0.376 Sum_probs=227.7
Q ss_pred CCCCEEEccCCCCcc--CCCccCCCCCCCCEEeccC-CCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCE
Q 003926 107 PDLKVLRLVSLGLWG--PLSGKISRLSSLEILNMSS-NFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAV 183 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g--~~~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 183 (786)
..++.|+|++|++.| .+|.++++|++|++|+|++ |+++|.+|..|+++++|++|+|++|++.+..|..+..+++|+.
T Consensus 50 ~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~ 129 (313)
T d1ogqa_ 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred EEEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcc
Confidence 367899999999998 5799999999999999997 8999999999999999999999999999999999999999999
Q ss_pred EEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCCCcC-CEEEcccCCCCCCCCcccc--chhhhhccCCcc
Q 003926 184 LSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYL-QVLDLENNALGPQFPKVGK--KLVTMILSKNKF 259 (786)
Q Consensus 184 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L-~~L~L~~N~l~~~~p~~~~--~L~~L~ls~N~l 259 (786)
+++++|.+.+.+|..|+++++|+.+++++|.++|.+|. +..+..+ +.+++++|++++..|.... .+..+++++|.+
T Consensus 130 l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~~l~l~~~~~ 209 (313)
T d1ogqa_ 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNML 209 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEE
T ss_pred cccccccccccCchhhccCcccceeecccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999999998886 6677665 8999999999998887654 345688999999
Q ss_pred CCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhh
Q 003926 260 RSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCL 339 (786)
Q Consensus 260 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~ 339 (786)
.+.+|..+..+++|+.|++++|.+.+.+| .++.+++|+.|+|++|+|+|.+|+.++.+++|+.|+|++|+|+|.+|..
T Consensus 210 ~~~~~~~~~~~~~l~~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~- 287 (313)
T d1ogqa_ 210 EGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG- 287 (313)
T ss_dssp EECCGGGCCTTSCCSEEECCSSEECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-
T ss_pred ccccccccccccccccccccccccccccc-ccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCCc-
Confidence 99999999999999999999999998765 6899999999999999999999999999999999999999999999963
Q ss_pred hcCCCCcEEEcCCcc-cCC
Q 003926 340 LAGSKNRVVLYARNC-LAA 357 (786)
Q Consensus 340 ~~~~~~~~~~~~~N~-l~~ 357 (786)
..+.++..+.+++|. ++|
T Consensus 288 ~~L~~L~~l~l~~N~~l~g 306 (313)
T d1ogqa_ 288 GNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp TTGGGSCGGGTCSSSEEES
T ss_pred ccCCCCCHHHhCCCccccC
Confidence 556677788888886 555
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.92 E-value=3.6e-24 Score=225.07 Aligned_cols=245 Identities=21% Similarity=0.254 Sum_probs=212.7
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEc
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 186 (786)
++|++|+|++|+++...+..|.++++|+.|++++|.+....|..|.++++|++|++++|+++. +|..+ ...|..|++
T Consensus 31 ~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~l~~-l~~~~--~~~l~~L~~ 107 (305)
T d1xkua_ 31 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKE-LPEKM--PKTLQELRV 107 (305)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSB-CCSSC--CTTCCEEEC
T ss_pred CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccCCccCc-Cccch--hhhhhhhhc
Confidence 579999999999998888899999999999999999999889999999999999999999984 55443 457999999
Q ss_pred cCCcCcccCCccccCCCCCCEEEccCCcCCcCC--C-CCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcC
Q 003926 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYGEV--P-DFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAI 263 (786)
Q Consensus 187 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~--p-~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~ 263 (786)
..|.+.+..+..+.....+..++...|...... + .+..+++|+.+++++|.+........++|+.|++++|.+++..
T Consensus 108 ~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~~l~~~~~~~L~~L~l~~n~~~~~~ 187 (305)
T d1xkua_ 108 HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVD 187 (305)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCCTTCSEEECTTSCCCEEC
T ss_pred cccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCccccCcccCCccCEEECCCCcCCCCC
Confidence 999999877777888888999999988664322 2 3788899999999999997655556789999999999999999
Q ss_pred hhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChh-h---
Q 003926 264 PAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNC-L--- 339 (786)
Q Consensus 264 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~-~--- 339 (786)
+..|.+++.++.|++++|.+.+..+..+.++++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|+. ++.. +
T Consensus 188 ~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l~~l~~L~~L~Ls~N~i~~-i~~~~f~~~ 265 (305)
T d1xkua_ 188 AASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISA-IGSNDFCPP 265 (305)
T ss_dssp TGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCC-CCTTSSSCS
T ss_pred hhHhhccccccccccccccccccccccccccccceeeeccccccc-ccccccccccCCCEEECCCCccCc-cChhhccCc
Confidence 999999999999999999999998999999999999999999998 467889999999999999999984 4432 2
Q ss_pred ---hcCCCCcEEEcCCcccC
Q 003926 340 ---LAGSKNRVVLYARNCLA 356 (786)
Q Consensus 340 ---~~~~~~~~~~~~~N~l~ 356 (786)
.....+..+.+.+|.+.
T Consensus 266 ~~~~~~~~L~~L~L~~N~~~ 285 (305)
T d1xkua_ 266 GYNTKKASYSGVSLFSNPVQ 285 (305)
T ss_dssp SCCTTSCCCSEEECCSSSSC
T ss_pred chhcccCCCCEEECCCCcCc
Confidence 23456788899988764
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=1.2e-23 Score=218.59 Aligned_cols=206 Identities=23% Similarity=0.198 Sum_probs=155.1
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcc-cccCCCCCCcccCCCCCCCEEE
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILD-ENMLAGRVPDWLGSLPILAVLS 185 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~-~N~l~~~~p~~~~~l~~L~~L~ 185 (786)
+++++|+|++|+|++..+..|.++++|++|++++|.+.+..+..+..+..++.+... .|.++...|..|.++++|++|+
T Consensus 32 ~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~ 111 (284)
T d1ozna_ 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (284)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhcccccCCEEe
Confidence 467899999999988888889999999999999999998888888889999988765 5566666678899999999999
Q ss_pred ccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcCh
Q 003926 186 LRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIP 264 (786)
Q Consensus 186 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p 264 (786)
+++|.+....+..+..+++|+.+++++|++++.++. |..+++|+.|++++|++.. ..+
T Consensus 112 l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~---------------------l~~ 170 (284)
T d1ozna_ 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISS---------------------VPE 170 (284)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCE---------------------ECT
T ss_pred cCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccc---------------------cch
Confidence 999998877777888889999999999999876654 7778888888888777653 344
Q ss_pred hhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCc
Q 003926 265 AEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTG 333 (786)
Q Consensus 265 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g 333 (786)
..|.++++|+.|++++|++++..|..|..+++|++|++++|++++..+..+..+++|+.|++++|.+.+
T Consensus 171 ~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C 239 (284)
T d1ozna_ 171 RAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (284)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred hhhccccccchhhhhhccccccChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCCC
Confidence 445555556666666666665555556666666666666666655555555555556666666665554
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.90 E-value=1.1e-22 Score=220.59 Aligned_cols=256 Identities=23% Similarity=0.250 Sum_probs=135.8
Q ss_pred CCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccC
Q 003926 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSI 153 (786)
Q Consensus 74 ~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 153 (786)
.++++|+++++++.. + ..+..|++|++|+|++|++++..+ |++|++|++|++++|.+++.. .+++
T Consensus 44 ~~l~~L~l~~~~I~~-l----------~gl~~L~nL~~L~Ls~N~l~~l~~--l~~L~~L~~L~L~~n~i~~i~--~l~~ 108 (384)
T d2omza2 44 DQVTTLQADRLGIKS-I----------DGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADIT--PLAN 108 (384)
T ss_dssp TTCCEEECCSSCCCC-C----------TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCG--GGTT
T ss_pred CCCCEEECCCCCCCC-c----------cccccCCCCCEEeCcCCcCCCCcc--ccCCccccccccccccccccc--cccc
Confidence 356777777665432 1 134566677777777777766432 667777777777777776542 2666
Q ss_pred CCCCcEEEcccccCCCCC--------------------------------------------------------------
Q 003926 154 LTSLQTLILDENMLAGRV-------------------------------------------------------------- 171 (786)
Q Consensus 154 l~~L~~L~L~~N~l~~~~-------------------------------------------------------------- 171 (786)
+++|+.|++++|.+++..
T Consensus 109 l~~L~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (384)
T d2omza2 109 LTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVS 188 (384)
T ss_dssp CTTCCEEECCSSCCCCCGGGTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCC
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccccc
Confidence 777777776666554211
Q ss_pred -CcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCc-cccch
Q 003926 172 -PDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPK-VGKKL 249 (786)
Q Consensus 172 -p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~-~~~~L 249 (786)
...+..++++..+++++|.+++..| +...++|+.|++++|.++. ++.+..+++|+.|++++|.+++..+. ..++|
T Consensus 189 ~~~~~~~l~~~~~l~l~~n~i~~~~~--~~~~~~L~~L~l~~n~l~~-~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~L 265 (384)
T d2omza2 189 DISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD-IGTLASLTNLTDLDLANNQISNLAPLSGLTKL 265 (384)
T ss_dssp CCGGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGGGGGCTTCSEEECCSSCCCCCGGGTTCTTC
T ss_pred cccccccccccceeeccCCccCCCCc--ccccCCCCEEECCCCCCCC-cchhhcccccchhccccCccCCCCcccccccC
Confidence 1123344556666666666665433 3445566666666666553 34455556666666666665544332 13455
Q ss_pred hhhhccCCccCCcCh--------------------hhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCc
Q 003926 250 VTMILSKNKFRSAIP--------------------AEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTG 309 (786)
Q Consensus 250 ~~L~ls~N~l~~~~p--------------------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g 309 (786)
+.|++++|++++..+ ..+..+++++.|++++|++++..| +..+++|+.|++++|++++
T Consensus 266 ~~L~l~~~~l~~~~~~~~~~~l~~l~~~~n~l~~~~~~~~~~~l~~L~ls~n~l~~l~~--l~~l~~L~~L~L~~n~l~~ 343 (384)
T d2omza2 266 TELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSD 343 (384)
T ss_dssp SEEECCSSCCCCCGGGTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCC
T ss_pred CEeeccCcccCCCCccccccccccccccccccccccccchhcccCeEECCCCCCCCCcc--cccCCCCCEEECCCCCCCC
Confidence 555555555544322 123444445555555555544321 4445555555555555543
Q ss_pred ccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCc
Q 003926 310 KLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARN 353 (786)
Q Consensus 310 ~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N 353 (786)
. + .+..+++|+.|++++|++++..| +..+++++.+.+++|
T Consensus 344 l-~-~l~~l~~L~~L~l~~N~l~~l~~--l~~l~~L~~L~L~~N 383 (384)
T d2omza2 344 V-S-SLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQ 383 (384)
T ss_dssp C-G-GGGGCTTCCEEECCSSCCCBCGG--GTTCTTCSEEECCCE
T ss_pred C-h-hHcCCCCCCEEECCCCcCCCChh--hccCCCCCEeeCCCC
Confidence 1 1 34445555555555555554332 344444555555444
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=2.3e-22 Score=208.79 Aligned_cols=221 Identities=22% Similarity=0.181 Sum_probs=185.6
Q ss_pred EccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEcc-CCcC
Q 003926 113 RLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLR-NNMF 191 (786)
Q Consensus 113 ~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls-~N~l 191 (786)
+.++++++ .+|..+. +++++|+|++|+|++..+..|.++++|++|++++|++.+..+..+..++.+..++.. .|.+
T Consensus 17 ~c~~~~L~-~iP~~ip--~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~ 93 (284)
T d1ozna_ 17 SCPQQGLQ-AVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQL 93 (284)
T ss_dssp ECCSSCCS-SCCTTCC--TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTC
T ss_pred EcCCCCCC-ccCCCCC--CCCCEEECcCCcCCCCCHHHhhcccccccccccccccccccccccccccccccccccccccc
Confidence 34444444 3344332 568999999999998777889999999999999999988888888888999988765 5667
Q ss_pred cccCCccccCCCCCCEEEccCCcCCcCCCC-CCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhhcCc
Q 003926 192 NGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSY 270 (786)
Q Consensus 192 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l 270 (786)
+...|..|.++++|+.|++++|.+....+. +....+|+.+++++|+++ +..+..|..+
T Consensus 94 ~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~---------------------~i~~~~f~~~ 152 (284)
T d1ozna_ 94 RSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ---------------------ALPDDTFRDL 152 (284)
T ss_dssp CCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCC---------------------CCCTTTTTTC
T ss_pred ccccchhhcccccCCEEecCCcccccccccccchhcccchhhhcccccc---------------------ccChhHhccc
Confidence 766678889999999999999988765543 667778888887777664 4445667888
Q ss_pred cccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEc
Q 003926 271 YQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLY 350 (786)
Q Consensus 271 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~ 350 (786)
++|+.|+|++|+|++..+..|.++++|+.+++++|++++..|..|..+++|+.||+++|.+++..|..+....++..+++
T Consensus 153 ~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l 232 (284)
T d1ozna_ 153 GNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRL 232 (284)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEEC
T ss_pred cchhhcccccCcccccchhhhccccccchhhhhhccccccChhHhhhhhhcccccccccccccccccccccccccCEEEe
Confidence 99999999999999988999999999999999999999999999999999999999999999988888889999999999
Q ss_pred CCcccCC
Q 003926 351 ARNCLAA 357 (786)
Q Consensus 351 ~~N~l~~ 357 (786)
++|.+.+
T Consensus 233 ~~N~l~C 239 (284)
T d1ozna_ 233 NDNPWVC 239 (284)
T ss_dssp CSSCEEC
T ss_pred cCCCCCC
Confidence 9998875
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=1.3e-22 Score=208.48 Aligned_cols=200 Identities=26% Similarity=0.262 Sum_probs=112.7
Q ss_pred CCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEE
Q 003926 105 KLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVL 184 (786)
Q Consensus 105 ~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 184 (786)
+...+...+.++++++. +|..+. ++|++|+|++|+|++..+..|.++++|++|+|++|+|+. +| .++.+++|++|
T Consensus 8 ~~~~~~~v~C~~~~L~~-iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L 82 (266)
T d1p9ag_ 8 KVASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQ-VDGTLPVLGTL 82 (266)
T ss_dssp CSTTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EE-CCSCCTTCCEE
T ss_pred ccCCCeEEEccCCCCCe-eCcCcC--cCCCEEECcCCcCCCcCHHHhhccccccccccccccccc-cc-ccccccccccc
Confidence 44455555666666654 344332 356666666666665555556666666666666666652 22 23455556666
Q ss_pred EccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcC
Q 003926 185 SLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAI 263 (786)
Q Consensus 185 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~ 263 (786)
+|++|++++ ++..+.++++|+.|++++|.+.+..+. +..+.+++.|++++|.+ +...
T Consensus 83 ~Ls~N~l~~-~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l---------------------~~l~ 140 (266)
T d1p9ag_ 83 DLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNEL---------------------KTLP 140 (266)
T ss_dssp ECCSSCCSS-CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCC---------------------CCCC
T ss_pred ccccccccc-cccccccccccccccccccccceeecccccccccccccccccccc---------------------ceec
Confidence 666665553 344555555555555555555443332 44444555554444443 3334
Q ss_pred hhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCC
Q 003926 264 PAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLT 332 (786)
Q Consensus 264 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~ 332 (786)
+..+..+++|+.|++++|+|++..+..|..+++|++|+|++|+|+ .+|+.+..+++|+.|+|++|.+.
T Consensus 141 ~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~ 208 (266)
T d1p9ag_ 141 PGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (266)
T ss_dssp TTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred cccccccccchhcccccccccccCccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecCCCCC
Confidence 444555666666666666666666666666666666666666666 45555555666666666666554
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.88 E-value=1.9e-21 Score=203.94 Aligned_cols=259 Identities=20% Similarity=0.232 Sum_probs=213.8
Q ss_pred cEEeCC-----------CCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEE
Q 003926 68 TVVCYE-----------ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEIL 136 (786)
Q Consensus 68 ~v~c~~-----------~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L 136 (786)
+|.|.+ ..++.|+|++|.++...+. .+.++++|++|++++|.+....|..|.++++|+.|
T Consensus 14 ~~~C~~~~L~~lP~~l~~~l~~L~Ls~N~i~~l~~~---------~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L 84 (305)
T d1xkua_ 14 VVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDG---------DFKNLKNLHTLILINNKISKISPGAFAPLVKLERL 84 (305)
T ss_dssp EEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTT---------TTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEE
T ss_pred EEEecCCCCCccCCCCCCCCCEEECcCCcCCCcChh---------HhhccccccccccccccccccchhhhhCCCccCEe
Confidence 588854 2467788888776543322 46789999999999999999989999999999999
Q ss_pred eccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCc--ccCCccccCCCCCCEEEccCCc
Q 003926 137 NMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFN--GTLPDSFSYLENLRVLALSNNH 214 (786)
Q Consensus 137 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~Ls~N~ 214 (786)
++++|+++. +|.. ....|..|++.+|.+.+..+..+.....+..++...|... ...+..|..+++|+.+++++|.
T Consensus 85 ~l~~n~l~~-l~~~--~~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~ 161 (305)
T d1xkua_ 85 YLSKNQLKE-LPEK--MPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTN 161 (305)
T ss_dssp ECCSSCCSB-CCSS--CCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSC
T ss_pred cccCCccCc-Cccc--hhhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCC
Confidence 999999985 5543 3468999999999999877778888999999999988643 4456678999999999999999
Q ss_pred CCcCCCCCCCCCcCCEEEcccCCCCCCCCccc---cchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhh
Q 003926 215 FYGEVPDFSGLTYLQVLDLENNALGPQFPKVG---KKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQAL 291 (786)
Q Consensus 215 l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~---~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 291 (786)
++..... ..++|+.|++++|......+... +.++.|++++|.+++..+..+.++++|++|+|++|+|+ .+|..|
T Consensus 162 l~~l~~~--~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l 238 (305)
T d1xkua_ 162 ITTIPQG--LPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGL 238 (305)
T ss_dssp CCSCCSS--CCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTT
T ss_pred ccccCcc--cCCccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeeccccccc-cccccc
Confidence 8754332 36899999999999987776543 57889999999999999999999999999999999998 568899
Q ss_pred CCCCCCcEEEeecCCCCcccCcc------CCCCCCCCEEeCcCCcCC-ccCChhhhc
Q 003926 292 LSLPSITYLNIADNKLTGKLFDD------LSCNPELGFVDLSSNLLT-GQLPNCLLA 341 (786)
Q Consensus 292 ~~l~~L~~L~l~~N~l~g~~~~~------~~~~~~L~~l~ls~N~l~-g~~p~~~~~ 341 (786)
.++++|+.|+|++|+|+...... +..+++|+.|+|++|.+. +.++...+.
T Consensus 239 ~~l~~L~~L~Ls~N~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~~~~~~~~~~~f~ 295 (305)
T d1xkua_ 239 ADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFR 295 (305)
T ss_dssp TTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGT
T ss_pred ccccCCCEEECCCCccCccChhhccCcchhcccCCCCEEECCCCcCccCcCCHhHhc
Confidence 99999999999999999654333 346788999999999985 556655443
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=9.1e-22 Score=202.07 Aligned_cols=203 Identities=25% Similarity=0.193 Sum_probs=175.5
Q ss_pred CCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCE
Q 003926 128 SRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRV 207 (786)
Q Consensus 128 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 207 (786)
.+.+.+...|.+++.++. +|+.+. ++|++|+|++|+|++..+..|.++++|++|+|++|+|+. +| .++.+++|+.
T Consensus 7 ~~~~~~~~v~C~~~~L~~-iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~-l~-~~~~l~~L~~ 81 (266)
T d1p9ag_ 7 SKVASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQ-VDGTLPVLGT 81 (266)
T ss_dssp ECSTTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EE-CCSCCTTCCE
T ss_pred cccCCCeEEEccCCCCCe-eCcCcC--cCCCEEECcCCcCCCcCHHHhhccccccccccccccccc-cc-cccccccccc
Confidence 456677778999999984 676664 578999999999987777889999999999999999985 44 4678999999
Q ss_pred EEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCC
Q 003926 208 LALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPF 287 (786)
Q Consensus 208 L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 287 (786)
|+|++|++++..+.+.++++|+.|++++|.+. +..+..+..+.+++.|++++|.+.+..
T Consensus 82 L~Ls~N~l~~~~~~~~~l~~L~~L~l~~~~~~---------------------~~~~~~~~~l~~l~~L~l~~n~l~~l~ 140 (266)
T d1p9ag_ 82 LDLSHNQLQSLPLLGQTLPALTVLDVSFNRLT---------------------SLPLGALRGLGELQELYLKGNELKTLP 140 (266)
T ss_dssp EECCSSCCSSCCCCTTTCTTCCEEECCSSCCC---------------------CCCSSTTTTCTTCCEEECTTSCCCCCC
T ss_pred cccccccccccccccccccccccccccccccc---------------------eeeccccccccccccccccccccceec
Confidence 99999999887777888888998888877664 344556677889999999999999888
Q ss_pred chhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 288 PQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 288 p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
+..+..+++|+.|++++|++++..+..+..+++|+.|+|++|+|+ .+|..++....++.+.+++|.+.+
T Consensus 141 ~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~C 209 (266)
T d1p9ag_ 141 PGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (266)
T ss_dssp TTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred cccccccccchhcccccccccccCccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecCCCCCC
Confidence 888999999999999999999999999999999999999999999 899999999999999999998764
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.85 E-value=1.7e-20 Score=202.93 Aligned_cols=241 Identities=24% Similarity=0.283 Sum_probs=176.5
Q ss_pred CCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCE
Q 003926 104 VKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAV 183 (786)
Q Consensus 104 ~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 183 (786)
..+.+|++|++++++++.. ..+..|++|++|+|++|+|++.. .++++++|++|++++|++++.. .++++++|+.
T Consensus 41 ~~l~~l~~L~l~~~~I~~l--~gl~~L~nL~~L~Ls~N~l~~l~--~l~~L~~L~~L~L~~n~i~~i~--~l~~l~~L~~ 114 (384)
T d2omza2 41 TDLDQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQIADIT--PLANLTNLTG 114 (384)
T ss_dssp HHHTTCCEEECCSSCCCCC--TTGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCCCG--GGTTCTTCCE
T ss_pred HHhCCCCEEECCCCCCCCc--cccccCCCCCEEeCcCCcCCCCc--cccCCccccccccccccccccc--cccccccccc
Confidence 4577899999999999764 35789999999999999999754 3999999999999999998643 3899999999
Q ss_pred EEccCCcCcccCC---------------------------------------------------------------cccc
Q 003926 184 LSLRNNMFNGTLP---------------------------------------------------------------DSFS 200 (786)
Q Consensus 184 L~Ls~N~l~~~~p---------------------------------------------------------------~~~~ 200 (786)
|++++|.+++..+ ..+.
T Consensus 115 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (384)
T d2omza2 115 LTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLA 194 (384)
T ss_dssp EECCSSCCCCCGGGTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCCGGGG
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccccccccccc
Confidence 9999888764211 2345
Q ss_pred CCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCC-ccccchhhhhccCCccCCcChhhhcCccccceeecc
Q 003926 201 YLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFP-KVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLS 279 (786)
Q Consensus 201 ~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p-~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls 279 (786)
.+++++.+++++|.+++..| +...++|+.|++++|.++.... ...++|+.|++++|.+++..+ +..+++|+.|+++
T Consensus 195 ~l~~~~~l~l~~n~i~~~~~-~~~~~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~ 271 (384)
T d2omza2 195 KLTNLESLIATNNQISDITP-LGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLG 271 (384)
T ss_dssp GCTTCSEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECC
T ss_pred cccccceeeccCCccCCCCc-ccccCCCCEEECCCCCCCCcchhhcccccchhccccCccCCCCc--ccccccCCEeecc
Confidence 56778888888888876544 5667888999999998875321 234788899999999887544 7788889999999
Q ss_pred CccccCCCc--------------------hhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhh
Q 003926 280 SNRFVGPFP--------------------QALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCL 339 (786)
Q Consensus 280 ~N~l~~~~p--------------------~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~ 339 (786)
+|++++..+ ..+..+++++.|++++|++++..+ +..+++|+.|++++|++++ +| .+
T Consensus 272 ~~~l~~~~~~~~~~~l~~l~~~~n~l~~~~~~~~~~~l~~L~ls~n~l~~l~~--l~~l~~L~~L~L~~n~l~~-l~-~l 347 (384)
T d2omza2 272 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSD-VS-SL 347 (384)
T ss_dssp SSCCCCCGGGTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCC-CG-GG
T ss_pred CcccCCCCccccccccccccccccccccccccchhcccCeEECCCCCCCCCcc--cccCCCCCEEECCCCCCCC-Ch-hH
Confidence 888876432 123444556666666666665432 5556666666666666664 33 35
Q ss_pred hcCCCCcEEEcCCcccCC
Q 003926 340 LAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 340 ~~~~~~~~~~~~~N~l~~ 357 (786)
..+++++.+++++|.+++
T Consensus 348 ~~l~~L~~L~l~~N~l~~ 365 (384)
T d2omza2 348 ANLTNINWLSAGHNQISD 365 (384)
T ss_dssp GGCTTCCEEECCSSCCCB
T ss_pred cCCCCCCEEECCCCcCCC
Confidence 556666666666666654
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.84 E-value=1.4e-22 Score=197.05 Aligned_cols=167 Identities=11% Similarity=0.036 Sum_probs=117.1
Q ss_pred ccCccCCCCCceeEEEEecCCcEEEEEEecccCCC-----C-------------hHHHHHHHHHHhcCCCCCcceeeeee
Q 003926 481 TSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCH-----S-------------TRNFMHHIELISKLRHRHLVSALGHC 542 (786)
Q Consensus 481 ~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~-----~-------------~~~f~~E~~~l~~l~H~NIv~l~g~~ 542 (786)
..+.||+|+||+||+|+..+|+.||||+++..... . ...+.+|...+.+++|.+++..+++.
T Consensus 4 vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~ 83 (191)
T d1zara2 4 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE 83 (191)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE
T ss_pred hCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEec
Confidence 46889999999999999888999999987632110 0 12345788999999999999877642
Q ss_pred eeccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCC
Q 003926 543 FECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN 622 (786)
Q Consensus 543 ~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~ 622 (786)
. .++||||++++.+.++ +......++.|+++|++|||+. +|+||||||+|||++++
T Consensus 84 ~-----------~~lvme~~~~~~~~~l----------~~~~~~~i~~ql~~~l~~lH~~---giiHrDiKP~NILv~~~ 139 (191)
T d1zara2 84 G-----------NAVLMELIDAKELYRV----------RVENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVSEE 139 (191)
T ss_dssp T-----------TEEEEECCCCEEGGGC----------CCSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEETT
T ss_pred C-----------CEEEEEeeccccccch----------hhHHHHHHHHHHHHHHHHHhhC---CEEEccCChhheeeeCC
Confidence 1 3799999998665432 2233457889999999999997 99999999999999976
Q ss_pred CcccccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHH
Q 003926 623 LVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLI 674 (786)
Q Consensus 623 ~~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvv 674 (786)
+ +++.|||.+..................+ .+.+ .++|+.++||||..--
T Consensus 140 ~-~~liDFG~a~~~~~~~~~~~l~rd~~~~-~~~f-~r~y~~~~d~~s~~~~ 188 (191)
T d1zara2 140 G-IWIIDFPQSVEVGEEGWREILERDVRNI-ITYF-SRTYRTEKDINSAIDR 188 (191)
T ss_dssp E-EEECCCTTCEETTSTTHHHHHHHHHHHH-HHHH-HHHHCCCCCHHHHHHH
T ss_pred C-EEEEECCCcccCCCCCcHHHHHHHHHHH-HHHH-cCCCCCcccHHHHHHH
Confidence 5 7899999986543221100000000000 1111 3467889999997543
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.75 E-value=7.9e-19 Score=170.39 Aligned_cols=154 Identities=25% Similarity=0.251 Sum_probs=85.5
Q ss_pred CCCCEEEccCCCCccCC-CccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEE
Q 003926 107 PDLKVLRLVSLGLWGPL-SGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLS 185 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~-~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 185 (786)
+++++|+|++|.|++.+ +..|.++++|+.|+|++|.+.+..+..|..+++|+.|+|++|++++..|..|.++++|++|+
T Consensus 29 ~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l~~l~~~~F~~l~~L~~L~ 108 (192)
T d1w8aa_ 29 LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLN 108 (192)
T ss_dssp TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEE
T ss_pred CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccccccccCHHHHhCCCcccccc
Confidence 35566666666665433 44455566666666666666655555566666666666666666555555555555566666
Q ss_pred ccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChh
Q 003926 186 LRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPA 265 (786)
Q Consensus 186 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~ 265 (786)
|++|+|++..|+.|..+++|++|+|++|.+....... .....++.+.+..|.++...|.
T Consensus 109 L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~~~~---------------------~~~~~l~~~~l~~~~~~c~~p~ 167 (192)
T d1w8aa_ 109 LYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLA---------------------WFAEWLRKKSLNGGAARCGAPS 167 (192)
T ss_dssp CCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGH---------------------HHHHHHHHHCCSGGGCBBCSST
T ss_pred cCCccccccCHHHhcCCcccccccccccccccccchH---------------------HHhhhhhhhcccCCCeEeCCCh
Confidence 6666555555555555555555555555554322110 0113355555666666655554
Q ss_pred hhcCccccceeeccCcccc
Q 003926 266 EVSSYYQLQRLDLSSNRFV 284 (786)
Q Consensus 266 ~~~~l~~L~~L~Ls~N~l~ 284 (786)
. +..++.++|+.|.|.
T Consensus 168 ~---l~~~~l~~L~~n~l~ 183 (192)
T d1w8aa_ 168 K---VRDVQIKDLPHSEFK 183 (192)
T ss_dssp T---TTTSBGGGSCTTTCC
T ss_pred h---hcCCEeeecCHhhCc
Confidence 4 344556677777765
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.75 E-value=3.2e-18 Score=165.98 Aligned_cols=171 Identities=20% Similarity=0.205 Sum_probs=137.5
Q ss_pred CEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCC-CccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccC
Q 003926 110 KVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAI-PQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRN 188 (786)
Q Consensus 110 ~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 188 (786)
+.++.++++++. +|..+. +++++|+|++|+|++.+ +..|.++++|+.|+|++|.+.+..+..|..+++|++|+|++
T Consensus 11 ~~v~Cs~~~L~~-iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~ 87 (192)
T d1w8aa_ 11 TTVDCTGRGLKE-IPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEEeCCCcCc-cCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeecc
Confidence 356677777764 454443 68999999999998744 66789999999999999999999999999999999999999
Q ss_pred CcCcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcCh-hh
Q 003926 189 NMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIP-AE 266 (786)
Q Consensus 189 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p-~~ 266 (786)
|+|++..|..|.++++|++|+|++|+|++..++ |..+++|++|+|++|.+.. ..+ .+
T Consensus 88 N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~---------------------~~~~~~ 146 (192)
T d1w8aa_ 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNC---------------------NCHLAW 146 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCC---------------------SGGGHH
T ss_pred ccccccCHHHHhCCCcccccccCCccccccCHHHhcCCccccccccccccccc---------------------ccchHH
Confidence 999998888999999999999999999988775 8899999999998887632 111 11
Q ss_pred hcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCc
Q 003926 267 VSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTG 309 (786)
Q Consensus 267 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g 309 (786)
+ ...++.+.+..|.+....|..+ ..++.++|+.|.|+-
T Consensus 147 ~--~~~l~~~~l~~~~~~c~~p~~l---~~~~l~~L~~n~l~C 184 (192)
T d1w8aa_ 147 F--AEWLRKKSLNGGAARCGAPSKV---RDVQIKDLPHSEFKC 184 (192)
T ss_dssp H--HHHHHHHCCSGGGCBBCSSTTT---TTSBGGGSCTTTCCC
T ss_pred H--hhhhhhhcccCCCeEeCCChhh---cCCEeeecCHhhCcC
Confidence 1 1235667788888887777654 556778889998864
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.75 E-value=2.9e-18 Score=171.20 Aligned_cols=187 Identities=21% Similarity=0.307 Sum_probs=98.2
Q ss_pred CCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCE
Q 003926 128 SRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRV 207 (786)
Q Consensus 128 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 207 (786)
..|.+|+.|++++|.|+. ++ .+..+++|++|+|++|++++..| +..+++|+++++++|.++. ++ .+.++++|+.
T Consensus 38 ~~l~~L~~L~l~~~~i~~-l~-~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~~-i~-~l~~l~~L~~ 111 (227)
T d1h6ua2 38 ADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKT 111 (227)
T ss_dssp HHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCE
T ss_pred HHcCCcCEEECCCCCCCc-ch-hHhcCCCCcEeecCCceeecccc--ccccccccccccccccccc-cc-cccccccccc
Confidence 334445555555555543 22 34455555555555555543222 4555555555555554442 22 3445555555
Q ss_pred EEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCc-cccchhhhhccCCccCCcChhhhcCccccceeeccCccccCC
Q 003926 208 LALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPK-VGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGP 286 (786)
Q Consensus 208 L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~-~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 286 (786)
+++++|...+. +.+...+.++.+.++++.+....+. ...+|+.|++++|.+.... .++++++|+.|+|++|++++
T Consensus 112 l~l~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~--~l~~l~~L~~L~Ls~n~l~~- 187 (227)
T d1h6ua2 112 LDLTSTQITDV-TPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLT--PLANLSKLTTLKADDNKISD- 187 (227)
T ss_dssp EECTTSCCCCC-GGGTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCC-
T ss_pred ccccccccccc-chhccccchhhhhchhhhhchhhhhccccccccccccccccccch--hhcccccceecccCCCccCC-
Confidence 55555544322 2233444455555555444332221 1233444444444443322 26677777777777777775
Q ss_pred CchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCc
Q 003926 287 FPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLS 327 (786)
Q Consensus 287 ~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls 327 (786)
+| .+.++++|++|+|++|++++..| +..+++|+.|+++
T Consensus 188 l~-~l~~l~~L~~L~Ls~N~lt~i~~--l~~l~~L~~L~ls 225 (227)
T d1h6ua2 188 IS-PLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLT 225 (227)
T ss_dssp CG-GGGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEE
T ss_pred Ch-hhcCCCCCCEEECcCCcCCCCcc--cccCCCCCEEEee
Confidence 33 26777777777777777775432 6677777777775
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.75 E-value=4.4e-18 Score=171.55 Aligned_cols=198 Identities=19% Similarity=0.120 Sum_probs=117.7
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCC-CccccCCCCCcEEEccc-ccCCCCCCcccCCCCCCCEE
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAI-PQELSILTSLQTLILDE-NMLAGRVPDWLGSLPILAVL 184 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L 184 (786)
+++++|+|++|.++...+..|.++++|++|+|++|.+...+ +..|.++++++.|.+.. |++....+..|.++++|+.|
T Consensus 29 ~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l 108 (242)
T d1xwdc1 29 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 108 (242)
T ss_dssp SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCEE
T ss_pred CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeecccccccccccccccccccccccccccccccccccccc
Confidence 36778888888887766667788888888888888776644 34567777777777653 56666666777777777777
Q ss_pred EccCCcCcccCCc-cccCCCCCCEEEccCCcCCcCCC-CCCCCC-cCCEEEcccCCCCCCCCccccchhhhhccCCccCC
Q 003926 185 SLRNNMFNGTLPD-SFSYLENLRVLALSNNHFYGEVP-DFSGLT-YLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRS 261 (786)
Q Consensus 185 ~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~-~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~ 261 (786)
++++|.+....+. .+..+..|..+..+++.+....+ .|.+++ .++.|++++|+++ .
T Consensus 109 ~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~---------------------~ 167 (242)
T d1xwdc1 109 LISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ---------------------E 167 (242)
T ss_dssp EEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC---------------------E
T ss_pred ccchhhhcccccccccccccccccccccccccccccccccccccccceeeeccccccc---------------------c
Confidence 7777777643221 23344445555555555554332 244433 4555565555553 2
Q ss_pred cChhhhcCcccc-ceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeC
Q 003926 262 AIPAEVSSYYQL-QRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDL 326 (786)
Q Consensus 262 ~~p~~~~~l~~L-~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~l 326 (786)
..+..+ +..++ +.+++++|+|+...+..|.++++|+.|+|++|+|+...+..+.++++|+.+++
T Consensus 168 i~~~~~-~~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~l~~ 232 (242)
T d1xwdc1 168 IHNCAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST 232 (242)
T ss_dssp ECTTTT-TTCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTTCCEEESSSE
T ss_pred cccccc-cchhhhccccccccccccccHHHhcCCCCCCEEECCCCcCCccCHHHHcCCcccccCcC
Confidence 222222 22333 33345566666444445666666666777666666544445555555555444
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.73 E-value=1.5e-17 Score=165.92 Aligned_cols=189 Identities=24% Similarity=0.301 Sum_probs=140.7
Q ss_pred cCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCC
Q 003926 103 LVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILA 182 (786)
Q Consensus 103 l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 182 (786)
+..|.+|+.|++.+|+++.. + .+..+++|+.|+|++|.+++..| +..+++|+.|++++|.++ .++ .+..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~l-~-~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~-~i~-~l~~l~~L~ 110 (227)
T d1h6ua2 37 QADLDGITTLSAFGTGVTTI-E-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLK-NVS-AIAGLQSIK 110 (227)
T ss_dssp HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCS-CCG-GGTTCTTCC
T ss_pred HHHcCCcCEEECCCCCCCcc-h-hHhcCCCCcEeecCCceeecccc--cccccccccccccccccc-ccc-ccccccccc
Confidence 34567788888888887754 3 47788888888888888876543 778888888888888776 333 577788888
Q ss_pred EEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCC-ccccchhhhhccCCccCC
Q 003926 183 VLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFP-KVGKKLVTMILSKNKFRS 261 (786)
Q Consensus 183 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p-~~~~~L~~L~ls~N~l~~ 261 (786)
.+++++|...+. ..+...+.+..+.++++.+... ..+.+.++|+.|++++|.+....+ ..+++|+.|++++|++++
T Consensus 111 ~l~l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~L~~L~l~~n~~~~~~~l~~l~~L~~L~Ls~n~l~~ 187 (227)
T d1h6ua2 111 TLDLTSTQITDV--TPLAGLSNLQVLYLDLNQITNI-SPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISD 187 (227)
T ss_dssp EEECTTSCCCCC--GGGTTCTTCCEEECCSSCCCCC-GGGGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCC
T ss_pred cccccccccccc--chhccccchhhhhchhhhhchh-hhhccccccccccccccccccchhhcccccceecccCCCccCC
Confidence 888888777643 2356677788888887777643 336677788888888887765443 234678888888888876
Q ss_pred cChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeec
Q 003926 262 AIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIAD 304 (786)
Q Consensus 262 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 304 (786)
++ .+.++++|++|+|++|+|++. | .+.++++|+.|++++
T Consensus 188 -l~-~l~~l~~L~~L~Ls~N~lt~i-~-~l~~l~~L~~L~lsn 226 (227)
T d1h6ua2 188 -IS-PLASLPNLIEVHLKNNQISDV-S-PLANTSNLFIVTLTN 226 (227)
T ss_dssp -CG-GGGGCTTCCEEECTTSCCCBC-G-GGTTCTTCCEEEEEE
T ss_pred -Ch-hhcCCCCCCEEECcCCcCCCC-c-ccccCCCCCEEEeeC
Confidence 33 388999999999999999964 3 389999999999974
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.71 E-value=2.9e-17 Score=161.54 Aligned_cols=179 Identities=22% Similarity=0.287 Sum_probs=103.6
Q ss_pred EccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCc
Q 003926 113 RLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFN 192 (786)
Q Consensus 113 ~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 192 (786)
++..+.+.+.++. ..|.+|+.|++++|.++... .+..+++|++|+|++|++++. + .++.+++|+.|++++|+++
T Consensus 30 ~l~~~~~~~~~~~--~~L~~L~~L~l~~~~i~~l~--~l~~l~~L~~L~L~~n~i~~l-~-~~~~l~~L~~L~l~~n~i~ 103 (210)
T d1h6ta2 30 NLKKKSVTDAVTQ--NELNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTDI-K-PLANLKNLGWLFLDENKVK 103 (210)
T ss_dssp HTTCSCTTSEECH--HHHHTCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCC
T ss_pred HhCcCccCCccCH--HHhcCccEEECcCCCCCCch--hHhhCCCCCEEeCCCccccCc-c-ccccCcccccccccccccc
Confidence 4455555554432 24566777777777776432 366677777777777777643 3 3566777777777777776
Q ss_pred ccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhhcCccc
Q 003926 193 GTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQ 272 (786)
Q Consensus 193 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~ 272 (786)
+ +| .+.++++|+.|++++|.+. .++.+..+++|+.+++++|.++.. ..+..+++
T Consensus 104 ~-l~-~l~~l~~L~~L~l~~~~~~-~~~~l~~l~~l~~l~~~~n~l~~~-----------------------~~~~~l~~ 157 (210)
T d1h6ta2 104 D-LS-SLKDLKKLKSLSLEHNGIS-DINGLVHLPQLESLYLGNNKITDI-----------------------TVLSRLTK 157 (210)
T ss_dssp C-GG-GGTTCTTCCEEECTTSCCC-CCGGGGGCTTCCEEECCSSCCCCC-----------------------GGGGGCTT
T ss_pred c-cc-ccccccccccccccccccc-cccccccccccccccccccccccc-----------------------cccccccc
Confidence 4 33 4666777777777777664 344566666777777766665421 12334445
Q ss_pred cceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCc
Q 003926 273 LQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLS 327 (786)
Q Consensus 273 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls 327 (786)
|+.+++++|++++. + .+.++++|+.|+|++|+++. ++ .+..+++|+.|+|+
T Consensus 158 L~~l~l~~n~l~~i-~-~l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~Ls 208 (210)
T d1h6ta2 158 LDTLSLEDNQISDI-V-PLAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELF 208 (210)
T ss_dssp CSEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEE
T ss_pred cccccccccccccc-c-cccCCCCCCEEECCCCCCCC-Ch-hhcCCCCCCEEEcc
Confidence 55555555555532 2 15555555555555555553 22 34555555555554
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.71 E-value=4.6e-17 Score=163.92 Aligned_cols=200 Identities=18% Similarity=0.102 Sum_probs=150.5
Q ss_pred CEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCC-CccCCCCCCCCEEecc-CCCCCCCCCcccc
Q 003926 75 SITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPL-SGKISRLSSLEILNMS-SNFLNGAIPQELS 152 (786)
Q Consensus 75 ~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~-~~~~~~l~~L~~L~Ls-~N~l~~~~p~~~~ 152 (786)
.++.|++++|.+....+ ..|.++++|++|+|++|.+...+ +..|.++++++.|++. .|++....+..|.
T Consensus 30 ~l~~L~Ls~n~i~~l~~---------~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~ 100 (242)
T d1xwdc1 30 NAIELRFVLTKLRVIQK---------GAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQ 100 (242)
T ss_dssp CCSEEEEESCCCCEECT---------TTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEE
T ss_pred CCCEEECcCCcCCccCh---------hHhhccchhhhhhhccccccceeecccccccccccccccccccccccccccccc
Confidence 46777777776543222 24678999999999999998755 5578899999999986 4788888888999
Q ss_pred CCCCCcEEEcccccCCCCCC-cccCCCCCCCEEEccCCcCcccCCccccCCC-CCCEEEccCCcCCcCCCCCCCCCcCCE
Q 003926 153 ILTSLQTLILDENMLAGRVP-DWLGSLPILAVLSLRNNMFNGTLPDSFSYLE-NLRVLALSNNHFYGEVPDFSGLTYLQV 230 (786)
Q Consensus 153 ~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~l~~L~~ 230 (786)
++++|+.|++++|.+....+ ..+..+..|..+..+++.+....+..|.+++ .++.|++++|+++...+.....++++.
T Consensus 101 ~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~~i~~~~~~~~~l~~ 180 (242)
T d1xwdc1 101 NLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDE 180 (242)
T ss_dssp CCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTTTTTCCEEE
T ss_pred ccccccccccchhhhcccccccccccccccccccccccccccccccccccccccceeeecccccccccccccccchhhhc
Confidence 99999999999999975433 2455667777778888888877777787765 789999999999876665555555544
Q ss_pred EE-cccCCCCCCCCccccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeec
Q 003926 231 LD-LENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIAD 304 (786)
Q Consensus 231 L~-L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 304 (786)
+. +++|+ ++...+..|.++++|++|||++|+|+...+..|.++++|+.|++.+
T Consensus 181 ~~~l~~n~---------------------l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~l~~~~ 234 (242)
T d1xwdc1 181 LNLSDNNN---------------------LEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYN 234 (242)
T ss_dssp EECTTCTT---------------------CCCCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTTCCEEESSSEES
T ss_pred cccccccc---------------------cccccHHHhcCCCCCCEEECCCCcCCccCHHHHcCCcccccCcCCC
Confidence 43 34444 4433344578889999999999999866566678888887777654
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.70 E-value=8.8e-17 Score=158.05 Aligned_cols=166 Identities=28% Similarity=0.327 Sum_probs=136.4
Q ss_pred CCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEE
Q 003926 105 KLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVL 184 (786)
Q Consensus 105 ~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 184 (786)
.|.+|+.|++++|.+.... .+..+++|+.|+|++|.|++.. .++.+++|++|++++|++++ +| .+..+++|+.|
T Consensus 44 ~L~~L~~L~l~~~~i~~l~--~l~~l~~L~~L~L~~n~i~~l~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L 117 (210)
T d1h6ta2 44 ELNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTDIK--PLANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSL 117 (210)
T ss_dssp HHHTCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEE
T ss_pred HhcCccEEECcCCCCCCch--hHhhCCCCCEEeCCCccccCcc--ccccCccccccccccccccc-cc-ccccccccccc
Confidence 4778999999999987653 3788999999999999998743 37889999999999999985 45 58899999999
Q ss_pred EccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcCh
Q 003926 185 SLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIP 264 (786)
Q Consensus 185 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p 264 (786)
++++|.+.. + ..+..+++|+.+++++|.+++ ++.+..+++|+.+++++|+++ + ++
T Consensus 118 ~l~~~~~~~-~-~~l~~l~~l~~l~~~~n~l~~-~~~~~~l~~L~~l~l~~n~l~---------------------~-i~ 172 (210)
T d1h6ta2 118 SLEHNGISD-I-NGLVHLPQLESLYLGNNKITD-ITVLSRLTKLDTLSLEDNQIS---------------------D-IV 172 (210)
T ss_dssp ECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCC-CGGGGGCTTCSEEECCSSCCC---------------------C-CG
T ss_pred ccccccccc-c-ccccccccccccccccccccc-ccccccccccccccccccccc---------------------c-cc
Confidence 999998863 3 468889999999999999875 445777888999988888764 2 22
Q ss_pred hhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeec
Q 003926 265 AEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIAD 304 (786)
Q Consensus 265 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 304 (786)
.+.++++|+.|+|++|+|+. +| .+.++++|+.|+|++
T Consensus 173 -~l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 173 -PLAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFS 209 (210)
T ss_dssp -GGTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEE
T ss_pred -cccCCCCCCEEECCCCCCCC-Ch-hhcCCCCCCEEEccC
Confidence 26778899999999999885 55 588999999999874
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=99.70 E-value=3.8e-16 Score=165.91 Aligned_cols=247 Identities=23% Similarity=0.256 Sum_probs=152.4
Q ss_pred CCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccC
Q 003926 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSI 153 (786)
Q Consensus 74 ~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 153 (786)
.+++.|+|++++++ .+|. .+++|++|+|++|+|+ .+|+. +.+|+.|++++|+++. ++. +
T Consensus 38 ~~l~~LdLs~~~L~-~lp~------------~~~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~l~~n~l~~-l~~-l-- 96 (353)
T d1jl5a_ 38 RQAHELELNNLGLS-SLPE------------LPPHLESLVASCNSLT-ELPEL---PQSLKSLLVDNNNLKA-LSD-L-- 96 (353)
T ss_dssp HTCSEEECTTSCCS-CCCS------------CCTTCSEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSC-CCS-C--
T ss_pred cCCCEEEeCCCCCC-CCCC------------CCCCCCEEECCCCCCc-ccccc---hhhhhhhhhhhcccch-hhh-h--
Confidence 35678888887765 2442 2467888888888887 45654 4577888888888773 332 1
Q ss_pred CCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCC------------------ccccCCCCCCEEEccCCcC
Q 003926 154 LTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLP------------------DSFSYLENLRVLALSNNHF 215 (786)
Q Consensus 154 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p------------------~~~~~l~~L~~L~Ls~N~l 215 (786)
.++|++|+|++|.+. .+|. ++.+++|+.|++++|.+....+ ..+..++.++.|++++|.+
T Consensus 97 p~~L~~L~L~~n~l~-~lp~-~~~l~~L~~L~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~l~~l~~l~~L~l~~n~~ 174 (353)
T d1jl5a_ 97 PPLLEYLGVSNNQLE-KLPE-LQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQLEELPELQNLPFLTAIYADNNSL 174 (353)
T ss_dssp CTTCCEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCC
T ss_pred ccccccccccccccc-cccc-hhhhccceeeccccccccccccccccccchhhccccccccccccccccceecccccccc
Confidence 245888888888887 4554 5778888888888887653221 2345566777788777765
Q ss_pred CcC-------------------CCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhhcCc------
Q 003926 216 YGE-------------------VPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSY------ 270 (786)
Q Consensus 216 ~~~-------------------~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l------ 270 (786)
... ++.+..++.|+.+++++|.... ++....++..+.+..|.+.... .....+
T Consensus 175 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~L~~l~l~~n~~~~-~~~~~~~l~~~~~~~~~~~~~~-~~~~~l~~~~~~ 252 (353)
T d1jl5a_ 175 KKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIYADNNLLKT-LPDLPPSLEALNVRDNYLTDLP-ELPQSLTFLDVS 252 (353)
T ss_dssp SSCCCCCTTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCSS-CCSCCTTCCEEECCSSCCSCCC-CCCTTCCEEECC
T ss_pred cccccccccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccc-cccccccccccc
Confidence 432 2335567788888888887653 3444445555555555554321 111000
Q ss_pred -----------cccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhh
Q 003926 271 -----------YQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCL 339 (786)
Q Consensus 271 -----------~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~ 339 (786)
......++..|.+. .....+++|++|+|++|+|+ .+|.. +++|+.|+|++|+|+ .+|..
T Consensus 253 ~~~~~~l~~l~~~~~~~~~~~~~~~----~~~~~~~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~L~~N~L~-~l~~~- 322 (353)
T d1jl5a_ 253 ENIFSGLSELPPNLYYLNASSNEIR----SLCDLPPSLEELNVSNNKLI-ELPAL---PPRLERLIASFNHLA-EVPEL- 322 (353)
T ss_dssp SSCCSEESCCCTTCCEEECCSSCCS----EECCCCTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCS-CCCCC-
T ss_pred cccccccccccchhcccccccCccc----cccccCCCCCEEECCCCccC-ccccc---cCCCCEEECCCCcCC-ccccc-
Confidence 01122223333222 12233567888888888887 34543 467788888888887 56653
Q ss_pred hcCCCCcEEEcCCcccCC
Q 003926 340 LAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 340 ~~~~~~~~~~~~~N~l~~ 357 (786)
..+++.+++++|.+..
T Consensus 323 --~~~L~~L~L~~N~L~~ 338 (353)
T d1jl5a_ 323 --PQNLKQLHVEYNPLRE 338 (353)
T ss_dssp --CTTCCEEECCSSCCSS
T ss_pred --cCCCCEEECcCCcCCC
Confidence 3457778888887764
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.69 E-value=1.1e-16 Score=156.04 Aligned_cols=175 Identities=25% Similarity=0.315 Sum_probs=88.3
Q ss_pred EccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCc
Q 003926 113 RLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFN 192 (786)
Q Consensus 113 ~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 192 (786)
.+..+.+++.++. ..+.+|+.|++++|.++.. +.+..+++|++|+|++|++++..| ++++++|++|++++|.+.
T Consensus 24 ~l~~~~~~~~~~~--~~l~~l~~L~l~~~~i~~l--~~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~ 97 (199)
T d2omxa2 24 VLGKTNVTDTVSQ--TDLDQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIA 97 (199)
T ss_dssp HTTCSSTTSEECH--HHHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred HhCCCCCCCccCH--HHhcCCCEEECCCCCCCCc--cccccCCCcCcCccccccccCccc--ccCCcccccccccccccc
Confidence 3444555444321 2455566666666665532 235556666666666666654322 556666666666666554
Q ss_pred ccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhhcCccc
Q 003926 193 GTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQ 272 (786)
Q Consensus 193 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~ 272 (786)
. ++ .+.++++|+.|++++|.+.. ++.+..+++|+.|++++|++.. ++ .+..+++
T Consensus 98 ~-~~-~l~~l~~L~~L~l~~~~~~~-~~~~~~l~~L~~L~l~~n~l~~----------------------~~-~l~~~~~ 151 (199)
T d2omxa2 98 D-IT-PLANLTNLTGLTLFNNQITD-IDPLKNLTNLNRLELSSNTISD----------------------IS-ALSGLTS 151 (199)
T ss_dssp C-CG-GGTTCTTCSEEECCSSCCCC-CGGGTTCTTCSEEECCSSCCCC----------------------CG-GGTTCTT
T ss_pred c-cc-cccccccccccccccccccc-ccccchhhhhHHhhhhhhhhcc----------------------cc-ccccccc
Confidence 3 22 25556666666666555543 2334555555555555554421 11 2344455
Q ss_pred cceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCE
Q 003926 273 LQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGF 323 (786)
Q Consensus 273 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~ 323 (786)
|+.|++++|++++. + .+.++++|+.|++++|++++. + .+..+++|+.
T Consensus 152 L~~L~l~~n~l~~l-~-~l~~l~~L~~L~ls~N~i~~i-~-~l~~L~~L~~ 198 (199)
T d2omxa2 152 LQQLNFSSNQVTDL-K-PLANLTTLERLDISSNKVSDI-S-VLAKLTNLES 198 (199)
T ss_dssp CSEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCCC-G-GGGGCTTCSE
T ss_pred ccccccccccccCC-c-cccCCCCCCEEECCCCCCCCC-c-cccCCCCCCc
Confidence 55555555555532 1 245555555555555555432 1 2344444443
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.69 E-value=1.6e-16 Score=154.85 Aligned_cols=163 Identities=31% Similarity=0.438 Sum_probs=132.1
Q ss_pred CCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCE
Q 003926 104 VKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAV 183 (786)
Q Consensus 104 ~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 183 (786)
..+++|++|++++|++... + .+..+++|++|+|++|++++..| ++++++|++|++++|.+.. ++ .+.++++|+.
T Consensus 37 ~~l~~l~~L~l~~~~i~~l-~-~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~~-~~-~l~~l~~L~~ 110 (199)
T d2omxa2 37 TDLDQVTTLQADRLGIKSI-D-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIAD-IT-PLANLTNLTG 110 (199)
T ss_dssp HHHTTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSE
T ss_pred HHhcCCCEEECCCCCCCCc-c-ccccCCCcCcCccccccccCccc--ccCCccccccccccccccc-cc-cccccccccc
Confidence 4578889999999988753 3 47889999999999999987543 8899999999999998874 44 4889999999
Q ss_pred EEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcC
Q 003926 184 LSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAI 263 (786)
Q Consensus 184 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~ 263 (786)
|++++|.+... ..+..+++|+.|++++|++.. ++.+..+++|+.|++++|++++ +
T Consensus 111 L~l~~~~~~~~--~~~~~l~~L~~L~l~~n~l~~-~~~l~~~~~L~~L~l~~n~l~~----------------------l 165 (199)
T d2omxa2 111 LTLFNNQITDI--DPLKNLTNLNRLELSSNTISD-ISALSGLTSLQQLNFSSNQVTD----------------------L 165 (199)
T ss_dssp EECCSSCCCCC--GGGTTCTTCSEEECCSSCCCC-CGGGTTCTTCSEEECCSSCCCC----------------------C
T ss_pred ccccccccccc--cccchhhhhHHhhhhhhhhcc-cccccccccccccccccccccC----------------------C
Confidence 99999988753 357889999999999999874 5668888999999988887642 2
Q ss_pred hhhhcCccccceeeccCccccCCCchhhCCCCCCcEE
Q 003926 264 PAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYL 300 (786)
Q Consensus 264 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 300 (786)
+ .++++++|+.|+|++|++++ ++ .+.++++|+.|
T Consensus 166 ~-~l~~l~~L~~L~ls~N~i~~-i~-~l~~L~~L~~L 199 (199)
T d2omxa2 166 K-PLANLTTLERLDISSNKVSD-IS-VLAKLTNLESL 199 (199)
T ss_dssp G-GGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCSEE
T ss_pred c-cccCCCCCCEEECCCCCCCC-Cc-cccCCCCCCcC
Confidence 2 36778889999999999885 44 47888888876
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=99.59 E-value=5.3e-14 Score=148.96 Aligned_cols=225 Identities=26% Similarity=0.348 Sum_probs=144.8
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEc
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 186 (786)
.+|++|||++|+++. +|+. +++|++|+|++|+|+ .+|.. +.+|+.|++++|+++ .++.. .++|++|++
T Consensus 38 ~~l~~LdLs~~~L~~-lp~~---~~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~l~~n~l~-~l~~l---p~~L~~L~L 105 (353)
T d1jl5a_ 38 RQAHELELNNLGLSS-LPEL---PPHLESLVASCNSLT-ELPEL---PQSLKSLLVDNNNLK-ALSDL---PPLLEYLGV 105 (353)
T ss_dssp HTCSEEECTTSCCSC-CCSC---CTTCSEEECCSSCCS-SCCCC---CTTCCEEECCSSCCS-CCCSC---CTTCCEEEC
T ss_pred cCCCEEEeCCCCCCC-CCCC---CCCCCEEECCCCCCc-ccccc---hhhhhhhhhhhcccc-hhhhh---ccccccccc
Confidence 468999999999975 6653 578999999999998 66765 468999999999987 34431 146999999
Q ss_pred cCCcCcccCCccccCCCCCCEEEccCCcCCcCCCC-------------------CCCCCcCCEEEcccCCCCCCCCcc--
Q 003926 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-------------------FSGLTYLQVLDLENNALGPQFPKV-- 245 (786)
Q Consensus 187 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-------------------~~~l~~L~~L~L~~N~l~~~~p~~-- 245 (786)
++|.+.. +|. ++++++|+.|++++|.++..... +..++.++.|++++|.+.......
T Consensus 106 ~~n~l~~-lp~-~~~l~~L~~L~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~l~~l~~l~~L~l~~n~~~~~~~~~~~ 183 (353)
T d1jl5a_ 106 SNNQLEK-LPE-LQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQLEELPELQNLPFLTAIYADNNSLKKLPDLPLS 183 (353)
T ss_dssp CSSCCSS-CCC-CTTCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCSSCCCCCTT
T ss_pred ccccccc-ccc-hhhhccceeeccccccccccccccccccchhhccccccccccccccccceeccccccccccccccccc
Confidence 9999984 664 68899999999999988754321 345667778888877664322110
Q ss_pred -------------------ccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCC
Q 003926 246 -------------------GKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNK 306 (786)
Q Consensus 246 -------------------~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 306 (786)
.+.|+.+++++|.... +|. ...++..+++.+|.+... +. ...++..+++..|.
T Consensus 184 ~~~l~~~~~~~~~~~~~~~l~~L~~l~l~~n~~~~-~~~---~~~~l~~~~~~~~~~~~~-~~---~~~~l~~~~~~~~~ 255 (353)
T d1jl5a_ 184 LESIVAGNNILEELPELQNLPFLTTIYADNNLLKT-LPD---LPPSLEALNVRDNYLTDL-PE---LPQSLTFLDVSENI 255 (353)
T ss_dssp CCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCSS-CCS---CCTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSC
T ss_pred ccccccccccccccccccccccccccccccccccc-ccc---cccccccccccccccccc-cc---cccccccccccccc
Confidence 1233444444443322 111 122333344444433321 11 12233444444433
Q ss_pred CCcc----------------cCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 307 LTGK----------------LFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 307 l~g~----------------~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
+.+. +......+++|+.|+|++|+++ .+|.. ..+++.+.+++|.++.
T Consensus 256 ~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~L~~N~L~~ 318 (353)
T d1jl5a_ 256 FSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPAL---PPRLERLIASFNHLAE 318 (353)
T ss_dssp CSEESCCCTTCCEEECCSSCCSEECCCCTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCSC
T ss_pred ccccccccchhcccccccCccccccccCCCCCEEECCCCccC-ccccc---cCCCCEEECCCCcCCc
Confidence 3321 1111233578999999999998 67764 4578899999999874
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.48 E-value=1.4e-14 Score=135.33 Aligned_cols=129 Identities=19% Similarity=0.192 Sum_probs=101.4
Q ss_pred ccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCC
Q 003926 102 TLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPIL 181 (786)
Q Consensus 102 ~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 181 (786)
.+.+..+|++|+|++|+++.. ++.+..+++|+.|||++|.|+.. + .|..+++|++|+|++|+++...+..+..+++|
T Consensus 13 ~~~n~~~lr~L~L~~n~I~~i-~~~~~~l~~L~~L~Ls~N~i~~l-~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L 89 (162)
T d1a9na_ 13 QYTNAVRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRKL-D-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 89 (162)
T ss_dssp EEECTTSCEEEECTTSCCCSC-CCGGGGTTCCSEEECCSSCCCEE-C-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred hccCcCcCcEEECCCCCCCcc-CccccccccCCEEECCCCCCCcc-C-CcccCcchhhhhcccccccCCCcccccccccc
Confidence 355778899999999998765 66677889999999999998854 3 58889999999999999987666667788999
Q ss_pred CEEEccCCcCcccCC-ccccCCCCCCEEEccCCcCCcCCC----CCCCCCcCCEEEc
Q 003926 182 AVLSLRNNMFNGTLP-DSFSYLENLRVLALSNNHFYGEVP----DFSGLTYLQVLDL 233 (786)
Q Consensus 182 ~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p----~~~~l~~L~~L~L 233 (786)
+.|+|++|+++..-. ..+..+++|+.|++++|.++.... .+..+++|++||-
T Consensus 90 ~~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~~~~~~r~~~i~~lp~L~~LD~ 146 (162)
T d1a9na_ 90 TELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDF 146 (162)
T ss_dssp CEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETT
T ss_pred ccceeccccccccccccccccccccchhhcCCCccccccchHHHHHHHCCCcCeeCC
Confidence 999999998874311 357788899999999998875432 1566788888763
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.48 E-value=6.5e-14 Score=124.38 Aligned_cols=104 Identities=29% Similarity=0.343 Sum_probs=79.4
Q ss_pred CEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCC
Q 003926 110 KVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNN 189 (786)
Q Consensus 110 ~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 189 (786)
|+|+|++|+++.. + .+..+++|++|++++|.|+ .+|+.++.+++|+.|++++|+++. +| .+..+++|+.|++++|
T Consensus 1 R~L~Ls~n~l~~l-~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 1 RVLHLAHKDLTVL-C-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNN 75 (124)
T ss_dssp SEEECTTSCCSSC-C-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSS
T ss_pred CEEEcCCCCCCCC-c-ccccCCCCCEEECCCCccC-cchhhhhhhhcccccccccccccc-cC-ccccccccCeEECCCC
Confidence 5788888888744 3 3788888888888888887 457778888888888888888874 44 4788888888888888
Q ss_pred cCcccC-CccccCCCCCCEEEccCCcCCcC
Q 003926 190 MFNGTL-PDSFSYLENLRVLALSNNHFYGE 218 (786)
Q Consensus 190 ~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~ 218 (786)
+++... ...+..+++|+.|++++|.++..
T Consensus 76 ~i~~~~~~~~l~~~~~L~~L~l~~N~i~~~ 105 (124)
T d1dcea3 76 RLQQSAAIQPLVSCPRLVLLNLQGNSLCQE 105 (124)
T ss_dssp CCCSSSTTGGGGGCTTCCEEECTTSGGGGS
T ss_pred ccCCCCCchhhcCCCCCCEEECCCCcCCcC
Confidence 887532 24577788888888888888653
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.45 E-value=1.1e-15 Score=168.22 Aligned_cols=133 Identities=20% Similarity=0.172 Sum_probs=85.8
Q ss_pred CCCcCCEEEcccCCCCCCCCc-------cccchhhhhccCCccCCcChhhh-----cCccccceeeccCccccCCCch--
Q 003926 224 GLTYLQVLDLENNALGPQFPK-------VGKKLVTMILSKNKFRSAIPAEV-----SSYYQLQRLDLSSNRFVGPFPQ-- 289 (786)
Q Consensus 224 ~l~~L~~L~L~~N~l~~~~p~-------~~~~L~~L~ls~N~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~~~~p~-- 289 (786)
....|+.|++++|.+...... ..+.+..+++++|.++......+ .....|+.+++++|.++..-..
T Consensus 253 ~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l~~~l~~~~~~L~~l~l~~~~l~~~~~~~l 332 (460)
T d1z7xw1 253 PSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHF 332 (460)
T ss_dssp TTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccchhhccccccccccccccccccchhhhhhhhc
Confidence 356789999999987543221 12456777888887754322221 2335688888888887654322
Q ss_pred --hhCCCCCCcEEEeecCCCCcc----cCccCC-CCCCCCEEeCcCCcCCc----cCChhhhcCCCCcEEEcCCcccC
Q 003926 290 --ALLSLPSITYLNIADNKLTGK----LFDDLS-CNPELGFVDLSSNLLTG----QLPNCLLAGSKNRVVLYARNCLA 356 (786)
Q Consensus 290 --~~~~l~~L~~L~l~~N~l~g~----~~~~~~-~~~~L~~l~ls~N~l~g----~~p~~~~~~~~~~~~~~~~N~l~ 356 (786)
.+...++|+.|+|++|++++. ++..+. ..+.|+.|+|++|.|+. .++..+..+.+++.+++++|+++
T Consensus 333 ~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~N~i~ 410 (460)
T d1z7xw1 333 SSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLG 410 (460)
T ss_dssp HHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred ccccccccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCCCCCChHHHHHHHHHHhcCCCCCEEECCCCcCC
Confidence 334556788888888887653 223332 45668888888888874 34555666677888888888775
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.44 E-value=8.8e-14 Score=129.85 Aligned_cols=87 Identities=17% Similarity=0.103 Sum_probs=43.1
Q ss_pred CCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCC
Q 003926 127 ISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLR 206 (786)
Q Consensus 127 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 206 (786)
|.+..+|+.|||++|+|+. +|..+..+++|+.|+|++|+++. ++ .|..+++|++|++++|+++...+..+..+++|+
T Consensus 14 ~~n~~~lr~L~L~~n~I~~-i~~~~~~l~~L~~L~Ls~N~i~~-l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~ 90 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRK-LD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 90 (162)
T ss_dssp EECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCE-EC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred ccCcCcCcEEECCCCCCCc-cCccccccccCCEEECCCCCCCc-cC-CcccCcchhhhhcccccccCCCccccccccccc
Confidence 4455555555555555553 24444455555555555555542 22 244555555555555555443333344445555
Q ss_pred EEEccCCcCC
Q 003926 207 VLALSNNHFY 216 (786)
Q Consensus 207 ~L~Ls~N~l~ 216 (786)
.|++++|+++
T Consensus 91 ~L~L~~N~i~ 100 (162)
T d1a9na_ 91 ELILTNNSLV 100 (162)
T ss_dssp EEECCSCCCC
T ss_pred cceecccccc
Confidence 5555555443
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.43 E-value=2.7e-13 Score=120.31 Aligned_cols=101 Identities=26% Similarity=0.332 Sum_probs=87.1
Q ss_pred CEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCC
Q 003926 134 EILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNN 213 (786)
Q Consensus 134 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 213 (786)
++|+|++|+++. ++ .+..+++|++|++++|+++ .+|+.|+.+++|+.|++++|.++. +| .+.++++|+.|++++|
T Consensus 1 R~L~Ls~n~l~~-l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 1 RVLHLAHKDLTV-LC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNN 75 (124)
T ss_dssp SEEECTTSCCSS-CC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSS
T ss_pred CEEEcCCCCCCC-Cc-ccccCCCCCEEECCCCccC-cchhhhhhhhcccccccccccccc-cC-ccccccccCeEECCCC
Confidence 589999999984 44 4899999999999999998 578889999999999999999985 44 5899999999999999
Q ss_pred cCCcCC--CCCCCCCcCCEEEcccCCCC
Q 003926 214 HFYGEV--PDFSGLTYLQVLDLENNALG 239 (786)
Q Consensus 214 ~l~~~~--p~~~~l~~L~~L~L~~N~l~ 239 (786)
+++... ..+..+++|+.|++++|.++
T Consensus 76 ~i~~~~~~~~l~~~~~L~~L~l~~N~i~ 103 (124)
T d1dcea3 76 RLQQSAAIQPLVSCPRLVLLNLQGNSLC 103 (124)
T ss_dssp CCCSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred ccCCCCCchhhcCCCCCCEEECCCCcCC
Confidence 998643 34788899999999998874
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.43 E-value=8.1e-15 Score=155.49 Aligned_cols=241 Identities=21% Similarity=0.206 Sum_probs=138.3
Q ss_pred cccCCCCCCCEEEccCCCCccC----CCccCCCCCCCCEEeccCCCCCCC----------CCccccCCCCCcEEEccccc
Q 003926 101 TTLVKLPDLKVLRLVSLGLWGP----LSGKISRLSSLEILNMSSNFLNGA----------IPQELSILTSLQTLILDENM 166 (786)
Q Consensus 101 ~~l~~l~~L~~L~L~~n~l~g~----~~~~~~~l~~L~~L~Ls~N~l~~~----------~p~~~~~l~~L~~L~L~~N~ 166 (786)
..+.+.+.|+.|+|++|.+... +...+...++|+.|+++++.+... +...+..+++|+.|+|++|.
T Consensus 25 ~~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~ 104 (344)
T d2ca6a1 25 AVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNA 104 (344)
T ss_dssp HHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCC
T ss_pred HHHhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCcccccccccc
Confidence 4566678888888888877442 344567778888888887765422 11234566777778887777
Q ss_pred CCCC----CCcccCCCCCCCEEEccCCcCcccCCc-------------cccCCCCCCEEEccCCcCCcCCC-----CCCC
Q 003926 167 LAGR----VPDWLGSLPILAVLSLRNNMFNGTLPD-------------SFSYLENLRVLALSNNHFYGEVP-----DFSG 224 (786)
Q Consensus 167 l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~-------------~~~~l~~L~~L~Ls~N~l~~~~p-----~~~~ 224 (786)
+... +...+...++|+.|++++|.+...-.. .....+.|+.|++++|+++..-- .+..
T Consensus 105 i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l~~ 184 (344)
T d2ca6a1 105 FGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQS 184 (344)
T ss_dssp CCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHH
T ss_pred cccccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccccccccccchhhh
Confidence 7643 223344567777777777766421000 01234556666666666542110 1334
Q ss_pred CCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhhcCccccceeeccCccccCC----CchhhCCCCCCcEE
Q 003926 225 LTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGP----FPQALLSLPSITYL 300 (786)
Q Consensus 225 l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L 300 (786)
.+.|+.|+|++|.++..- +...+...+..+++|+.|+|++|.++.. +...+..+++|+.|
T Consensus 185 ~~~L~~L~L~~n~i~~~g----------------~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L 248 (344)
T d2ca6a1 185 HRLLHTVKMVQNGIRPEG----------------IEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLREL 248 (344)
T ss_dssp CTTCCEEECCSSCCCHHH----------------HHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEE
T ss_pred hhhhcccccccccccccc----------------cccchhhhhcchhhhcccccccccccccccccccccccccccchhh
Confidence 455666666666553100 0001122345566777777777776532 34456667777777
Q ss_pred EeecCCCCcccCcc----CC--CCCCCCEEeCcCCcCCcc----CChhhh-cCCCCcEEEcCCcccCC
Q 003926 301 NIADNKLTGKLFDD----LS--CNPELGFVDLSSNLLTGQ----LPNCLL-AGSKNRVVLYARNCLAA 357 (786)
Q Consensus 301 ~l~~N~l~g~~~~~----~~--~~~~L~~l~ls~N~l~g~----~p~~~~-~~~~~~~~~~~~N~l~~ 357 (786)
+|++|.|++.-... +. ..+.|+.|++++|+++.. +...+. ..+.++.+++++|.+..
T Consensus 249 ~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~ 316 (344)
T d2ca6a1 249 GLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 316 (344)
T ss_dssp ECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred hhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCCC
Confidence 77777776542222 21 235677777777777632 233332 34567777777777753
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.43 E-value=1.6e-14 Score=148.68 Aligned_cols=217 Identities=19% Similarity=0.146 Sum_probs=129.0
Q ss_pred CCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCC-CCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEcc
Q 003926 109 LKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGA-IPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLR 187 (786)
Q Consensus 109 L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 187 (786)
+..+.++.......+.. .....+|++|||++|.++.. ++..+..+++|++|+|++|.++...+..++.+++|++|+++
T Consensus 25 ~~~lrl~~~~~~~~~~~-~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls 103 (284)
T d2astb2 25 VIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLS 103 (284)
T ss_dssp CSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECT
T ss_pred ceEeeccccccccchhh-hccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCcccc
Confidence 34556655544433332 33455777777777776543 34445677777777777777766666677777777777777
Q ss_pred CC-cCccc-CCccccCCCCCCEEEccCC-cCCcC-CC-CCC-CCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCC
Q 003926 188 NN-MFNGT-LPDSFSYLENLRVLALSNN-HFYGE-VP-DFS-GLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRS 261 (786)
Q Consensus 188 ~N-~l~~~-~p~~~~~l~~L~~L~Ls~N-~l~~~-~p-~~~-~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~ 261 (786)
++ .++.. +...+.++++|+.|+++++ .++.. +. .+. ..++|+.|+++++.. .++.
T Consensus 104 ~c~~itd~~l~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~-------------------~i~~ 164 (284)
T d2astb2 104 GCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRK-------------------NLQK 164 (284)
T ss_dssp TCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGG-------------------GSCH
T ss_pred ccccccccccchhhHHHHhccccccccccccccccchhhhcccccccchhhhccccc-------------------cccc
Confidence 74 34321 1222345677777777764 33321 11 111 124566666654310 1111
Q ss_pred -cChhhhcCccccceeeccCc-cccCCCchhhCCCCCCcEEEeec-CCCCcccCccCCCCCCCCEEeCcCCcCCccCChh
Q 003926 262 -AIPAEVSSYYQLQRLDLSSN-RFVGPFPQALLSLPSITYLNIAD-NKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNC 338 (786)
Q Consensus 262 -~~p~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~l~~-N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~ 338 (786)
.+...+.++++|++|+|++| .+++.....+.++++|++|+|++ +.+++.....++.+++|+.|+++++--.+.++..
T Consensus 165 ~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~~~d~~l~~l 244 (284)
T d2astb2 165 SDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLL 244 (284)
T ss_dssp HHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTSSCTTCHHHH
T ss_pred ccccccccccccccccccccccCCCchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCCCCHHHHHHH
Confidence 12233456778888888875 46766777788888888888888 4677766677778888888888876322333333
Q ss_pred hhcCCCC
Q 003926 339 LLAGSKN 345 (786)
Q Consensus 339 ~~~~~~~ 345 (786)
...++.+
T Consensus 245 ~~~lp~L 251 (284)
T d2astb2 245 KEALPHL 251 (284)
T ss_dssp HHHSTTS
T ss_pred HHhCccc
Confidence 3334443
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.36 E-value=5.1e-14 Score=144.79 Aligned_cols=213 Identities=19% Similarity=0.150 Sum_probs=148.1
Q ss_pred CCCCCCCEEEccCCCCccC-CCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccc-cCCCC-CCcccCCCCC
Q 003926 104 VKLPDLKVLRLVSLGLWGP-LSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDEN-MLAGR-VPDWLGSLPI 180 (786)
Q Consensus 104 ~~l~~L~~L~L~~n~l~g~-~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~ 180 (786)
....+|++|||+++.+.+. +...+.++++|++|+|++|.+++..+..++.+++|++|+|+++ .++.. +...+.++++
T Consensus 43 ~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~ 122 (284)
T d2astb2 43 FSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSR 122 (284)
T ss_dssp CCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTT
T ss_pred ccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHh
Confidence 4567899999999988754 4556789999999999999999888889999999999999995 45421 2233467899
Q ss_pred CCEEEccCC-cCcc-cCCccccC-CCCCCEEEccCC--cCCcC-CCC-CCCCCcCCEEEcccCCCCCCCCccccchhhhh
Q 003926 181 LAVLSLRNN-MFNG-TLPDSFSY-LENLRVLALSNN--HFYGE-VPD-FSGLTYLQVLDLENNALGPQFPKVGKKLVTMI 253 (786)
Q Consensus 181 L~~L~Ls~N-~l~~-~~p~~~~~-l~~L~~L~Ls~N--~l~~~-~p~-~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ 253 (786)
|++|+++++ .++. .+...+.. .++|+.|++++. .++.. +.. +.++++|++|++++|..
T Consensus 123 L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~--------------- 187 (284)
T d2astb2 123 LDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVM--------------- 187 (284)
T ss_dssp CCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTT---------------
T ss_pred ccccccccccccccccchhhhcccccccchhhhcccccccccccccccccccccccccccccccC---------------
Confidence 999999985 4432 12223333 478999999875 33321 222 34578888888887632
Q ss_pred ccCCccCCcChhhhcCccccceeeccC-ccccCCCchhhCCCCCCcEEEeecCCCCc-ccCccCCCCCCCCEEeCcCCcC
Q 003926 254 LSKNKFRSAIPAEVSSYYQLQRLDLSS-NRFVGPFPQALLSLPSITYLNIADNKLTG-KLFDDLSCNPELGFVDLSSNLL 331 (786)
Q Consensus 254 ls~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~g-~~~~~~~~~~~L~~l~ls~N~l 331 (786)
+++.....+..+++|++|+|++ +.+++.....++++++|+.|+++++ ++. .+......+|+| .+..+.+
T Consensus 188 -----itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~-~~d~~l~~l~~~lp~L---~i~~~~l 258 (284)
T d2astb2 188 -----LKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPDGTLQLLKEALPHL---QINCSHF 258 (284)
T ss_dssp -----CCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCTTCHHHHHHHSTTS---EESCCCS
T ss_pred -----CCchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCC-CCHHHHHHHHHhCccc---cccCccC
Confidence 2334445567788899999988 4677666677888899999999877 332 222222334554 4566777
Q ss_pred CccCChhhh
Q 003926 332 TGQLPNCLL 340 (786)
Q Consensus 332 ~g~~p~~~~ 340 (786)
++..++.++
T Consensus 259 s~~~~~~~~ 267 (284)
T d2astb2 259 TTIARPTIG 267 (284)
T ss_dssp CCTTCSSCS
T ss_pred CCCCCCccC
Confidence 765555443
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.34 E-value=4.6e-14 Score=149.58 Aligned_cols=218 Identities=17% Similarity=0.132 Sum_probs=142.6
Q ss_pred CCccCCCCCCCCEEeccCCCCCCC----CCccccCCCCCcEEEcccccCCCCC----------CcccCCCCCCCEEEccC
Q 003926 123 LSGKISRLSSLEILNMSSNFLNGA----IPQELSILTSLQTLILDENMLAGRV----------PDWLGSLPILAVLSLRN 188 (786)
Q Consensus 123 ~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~----------p~~~~~l~~L~~L~Ls~ 188 (786)
+...+...+.|+.|+|++|.+... +...+...++|+.|+++++.+.... ...+..+++|+.|+|++
T Consensus 23 l~~~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~ 102 (344)
T d2ca6a1 23 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 102 (344)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCcccccccc
Confidence 344566778899999999987542 3344667788888888877653221 12345667788888888
Q ss_pred CcCccc----CCccccCCCCCCEEEccCCcCCcCCC--------C------CCCCCcCCEEEcccCCCCCCCCccccchh
Q 003926 189 NMFNGT----LPDSFSYLENLRVLALSNNHFYGEVP--------D------FSGLTYLQVLDLENNALGPQFPKVGKKLV 250 (786)
Q Consensus 189 N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p--------~------~~~l~~L~~L~L~~N~l~~~~p~~~~~L~ 250 (786)
|.+... +...+...++|+.|++++|.+...-. . ......|+.|++++|.++..-.
T Consensus 103 n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~------- 175 (344)
T d2ca6a1 103 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSM------- 175 (344)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGH-------
T ss_pred cccccccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeeccccccccccc-------
Confidence 877643 22334456777778877777642100 0 1234456666666655421000
Q ss_pred hhhccCCccCCcChhhhcCccccceeeccCccccCC-----CchhhCCCCCCcEEEeecCCCCcc----cCccCCCCCCC
Q 003926 251 TMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGP-----FPQALLSLPSITYLNIADNKLTGK----LFDDLSCNPEL 321 (786)
Q Consensus 251 ~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-----~p~~~~~l~~L~~L~l~~N~l~g~----~~~~~~~~~~L 321 (786)
..+...+...+.|+.|+|++|++... +...+..+++|+.|+|++|.++.. +...+..+++|
T Consensus 176 ----------~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L 245 (344)
T d2ca6a1 176 ----------KEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNL 245 (344)
T ss_dssp ----------HHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTC
T ss_pred ----------ccccchhhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccc
Confidence 11233455667899999999998642 344577889999999999998753 34556788999
Q ss_pred CEEeCcCCcCCccCCh----hhhc--CCCCcEEEcCCcccCC
Q 003926 322 GFVDLSSNLLTGQLPN----CLLA--GSKNRVVLYARNCLAA 357 (786)
Q Consensus 322 ~~l~ls~N~l~g~~p~----~~~~--~~~~~~~~~~~N~l~~ 357 (786)
+.|+|++|.+++.-.. .+.. ...+..++++.|.+..
T Consensus 246 ~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~ 287 (344)
T d2ca6a1 246 RELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIEL 287 (344)
T ss_dssp CEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBH
T ss_pred hhhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCCh
Confidence 9999999999864222 2222 3568899999998753
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.33 E-value=9.8e-15 Score=160.48 Aligned_cols=275 Identities=23% Similarity=0.221 Sum_probs=184.2
Q ss_pred CEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCcc----CCCccCCCCCCCCEEeccCCCCCCC----
Q 003926 75 SITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWG----PLSGKISRLSSLEILNMSSNFLNGA---- 146 (786)
Q Consensus 75 ~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g----~~~~~~~~l~~L~~L~Ls~N~l~~~---- 146 (786)
.++.||+++++++. ..+...+..+++|+.|+|++|+++. .+...+..+++|+.|||++|.|+..
T Consensus 3 ~l~~ld~~~~~i~~--------~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~ 74 (460)
T d1z7xw1 3 DIQSLDIQCEELSD--------ARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHC 74 (460)
T ss_dssp EEEEEEEESCCCCH--------HHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHH
T ss_pred CCCEEEeeCCcCCh--------HHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHH
Confidence 57899998887552 1223345678999999999999873 3456678899999999999998531
Q ss_pred CCcccc-CCCCCcEEEcccccCCCC----CCcccCCCCCCCEEEccCCcCcccCCc------------------------
Q 003926 147 IPQELS-ILTSLQTLILDENMLAGR----VPDWLGSLPILAVLSLRNNMFNGTLPD------------------------ 197 (786)
Q Consensus 147 ~p~~~~-~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~------------------------ 197 (786)
+...+. ...+|++|+|++|+++.. ++..+..+++|++|+|++|.++.....
T Consensus 75 l~~~l~~~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 154 (460)
T d1z7xw1 75 VLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLS 154 (460)
T ss_dssp HHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCB
T ss_pred HHHHHhcCCCCCCEEECCCCCccccccccccchhhccccccccccccccchhhhhhhhhhcccccccccccccccccccc
Confidence 222232 345899999999999753 456788899999999999987531000
Q ss_pred ---------cccCCCCCCEEEccCCcCCcC-----------CC-----------------------CCCCCCcCCEEEcc
Q 003926 198 ---------SFSYLENLRVLALSNNHFYGE-----------VP-----------------------DFSGLTYLQVLDLE 234 (786)
Q Consensus 198 ---------~~~~l~~L~~L~Ls~N~l~~~-----------~p-----------------------~~~~l~~L~~L~L~ 234 (786)
.+.....++.++++++..... .+ .+.....++.++++
T Consensus 155 ~~~~~~~~~~l~~~~~~~~~~ls~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~ 234 (460)
T d1z7xw1 155 AASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALG 234 (460)
T ss_dssp GGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECC
T ss_pred hhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhcccccccccccccccchh
Confidence 011234566666665544210 00 01224556677777
Q ss_pred cCCCCCC--------CCccccchhhhhccCCccCCcC----hhhhcCccccceeeccCccccCCCchh----h-CCCCCC
Q 003926 235 NNALGPQ--------FPKVGKKLVTMILSKNKFRSAI----PAEVSSYYQLQRLDLSSNRFVGPFPQA----L-LSLPSI 297 (786)
Q Consensus 235 ~N~l~~~--------~p~~~~~L~~L~ls~N~l~~~~----p~~~~~l~~L~~L~Ls~N~l~~~~p~~----~-~~l~~L 297 (786)
+|.+... .......++.+++++|.+.... ...+...+.++.+++++|.+....... + .....|
T Consensus 235 ~n~~~~~~~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l~~~l~~~~~~L 314 (460)
T d1z7xw1 235 SNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQL 314 (460)
T ss_dssp SSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCC
T ss_pred hccccccccchhhcccccccccccccccccccccccccccccccccccccccccccccccccccccchhhcccccccccc
Confidence 7654221 0112346888999999886542 233456788999999999987432222 2 245689
Q ss_pred cEEEeecCCCCcccCcc----CCCCCCCCEEeCcCCcCCcc----CChhhh-cCCCCcEEEcCCcccCC
Q 003926 298 TYLNIADNKLTGKLFDD----LSCNPELGFVDLSSNLLTGQ----LPNCLL-AGSKNRVVLYARNCLAA 357 (786)
Q Consensus 298 ~~L~l~~N~l~g~~~~~----~~~~~~L~~l~ls~N~l~g~----~p~~~~-~~~~~~~~~~~~N~l~~ 357 (786)
+.+++++|.++...... +...+.|+.|+|++|+++.. ++..+. ....++.+++++|.++.
T Consensus 315 ~~l~l~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~~ 383 (460)
T d1z7xw1 315 ESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSD 383 (460)
T ss_dssp CEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCH
T ss_pred ccccccccchhhhhhhhcccccccccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCCCCCCh
Confidence 99999999998654332 34567899999999999753 444443 34568999999998863
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.27 E-value=5.1e-14 Score=136.25 Aligned_cols=40 Identities=25% Similarity=0.225 Sum_probs=16.9
Q ss_pred CccccceeeccCccccCCCc-hhhCCCCCCcEEEeecCCCC
Q 003926 269 SYYQLQRLDLSSNRFVGPFP-QALLSLPSITYLNIADNKLT 308 (786)
Q Consensus 269 ~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~ 308 (786)
.+++|+.|+|++|+|+.... ..+..+++|+.|+|++|+++
T Consensus 113 ~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~ 153 (198)
T d1m9la_ 113 KLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLY 153 (198)
T ss_dssp HHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHH
T ss_pred ccccccccccccchhccccccccccCCCccceeecCCCccc
Confidence 33444444444444432111 23444444444444444443
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.25 E-value=1.4e-13 Score=133.03 Aligned_cols=129 Identities=21% Similarity=0.317 Sum_probs=77.4
Q ss_pred CCCEEeccCCC--CCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEE
Q 003926 132 SLEILNMSSNF--LNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLA 209 (786)
Q Consensus 132 ~L~~L~Ls~N~--l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 209 (786)
.++.++++.+. +. .+|..+..+++|++|+|++|+++ .++ .|..+++|+.|+|++|.++ .+|..+..+++|+.|+
T Consensus 24 ~~~~~~l~~~~~~i~-~l~~sl~~L~~L~~L~Ls~n~I~-~i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~ 99 (198)
T d1m9la_ 24 EAEKVELHGMIPPIE-KMDATLSTLKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELW 99 (198)
T ss_dssp TCSCEECCBCCTTCC-CCHHHHHHTTTCCEEECSEEEES-CCC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEE
T ss_pred ccceeeeecccCchh-hhhhHHhcccccceeECcccCCC-Ccc-cccCCccccChhhcccccc-cccccccccccccccc
Confidence 34455555432 22 34456666777777777777766 333 3666667777777777665 3454444455666666
Q ss_pred ccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcCh--hhhcCccccceeeccCccccCCC
Q 003926 210 LSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIP--AEVSSYYQLQRLDLSSNRFVGPF 287 (786)
Q Consensus 210 Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~~ 287 (786)
+++|+++. ++.+..+++|+.|+|++|+++ . ++ ..+..+++|+.|+|++|.+....
T Consensus 100 l~~N~i~~-l~~~~~l~~L~~L~L~~N~i~---------------------~-~~~~~~l~~l~~L~~L~L~~N~l~~~~ 156 (198)
T d1m9la_ 100 ISYNQIAS-LSGIEKLVNLRVLYMSNNKIT---------------------N-WGEIDKLAALDKLEDLLLAGNPLYNDY 156 (198)
T ss_dssp CSEEECCC-HHHHHHHHHSSEEEESEEECC---------------------C-HHHHHHHTTTTTCSEEEECSSHHHHHH
T ss_pred cccccccc-cccccccccccccccccchhc---------------------c-ccccccccCCCccceeecCCCccccCc
Confidence 66666653 234555666666666666552 2 22 35677888888888888876543
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.25 E-value=2.2e-11 Score=112.46 Aligned_cols=106 Identities=22% Similarity=0.097 Sum_probs=61.6
Q ss_pred CCCEEeccCCCCCCCCCccccCCCCCcEEEccccc-CCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEc
Q 003926 132 SLEILNMSSNFLNGAIPQELSILTSLQTLILDENM-LAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLAL 210 (786)
Q Consensus 132 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 210 (786)
..+.++.+++.+. ..|..+..+++|+.|+|++|+ ++...+..|.++++|+.|+|++|+|+...|..|..+++|++|+|
T Consensus 9 ~~~~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L 87 (156)
T d2ifga3 9 GSSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNL 87 (156)
T ss_dssp SSSCEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEEC
T ss_pred CCCeEEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceec
Confidence 3444555555554 334555556666666665443 55444455666666666666666666655666666666666666
Q ss_pred cCCcCCcCCCCCCCCCcCCEEEcccCCC
Q 003926 211 SNNHFYGEVPDFSGLTYLQVLDLENNAL 238 (786)
Q Consensus 211 s~N~l~~~~p~~~~l~~L~~L~L~~N~l 238 (786)
++|+|+...+......+|+.|+|++|.+
T Consensus 88 s~N~l~~l~~~~~~~~~l~~L~L~~Np~ 115 (156)
T d2ifga3 88 SFNALESLSWKTVQGLSLQELVLSGNPL 115 (156)
T ss_dssp CSSCCSCCCSTTTCSCCCCEEECCSSCC
T ss_pred cCCCCcccChhhhccccccccccCCCcc
Confidence 6666665444433333566666666655
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.19 E-value=4.4e-11 Score=110.41 Aligned_cols=107 Identities=22% Similarity=0.166 Sum_probs=70.0
Q ss_pred CCCEEEccCCCCccCCCccCCCCCCCCEEeccCC-CCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEc
Q 003926 108 DLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSN-FLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (786)
Q Consensus 108 ~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 186 (786)
..+.++.+++++.. .|..+..+++|+.|+|++| .++...+..|.++++|+.|+|++|+|+...|..|..+++|++|+|
T Consensus 9 ~~~~l~c~~~~~~~-~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L 87 (156)
T d2ifga3 9 GSSGLRCTRDGALD-SLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNL 87 (156)
T ss_dssp SSSCEECCSSCCCT-TTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEEC
T ss_pred CCCeEEecCCCCcc-CcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceec
Confidence 34456666666543 3445666777777777655 366555666777777777777777777666677777777777777
Q ss_pred cCCcCcccCCccccCCCCCCEEEccCCcCC
Q 003926 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFY 216 (786)
Q Consensus 187 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 216 (786)
++|+|+...+..|..+ +|+.|+|++|.+.
T Consensus 88 s~N~l~~l~~~~~~~~-~l~~L~L~~Np~~ 116 (156)
T d2ifga3 88 SFNALESLSWKTVQGL-SLQELVLSGNPLH 116 (156)
T ss_dssp CSSCCSCCCSTTTCSC-CCCEEECCSSCCC
T ss_pred cCCCCcccChhhhccc-cccccccCCCccc
Confidence 7777774444444443 5777777777764
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.31 E-value=8.9e-09 Score=95.19 Aligned_cols=104 Identities=20% Similarity=0.102 Sum_probs=57.2
Q ss_pred CCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCC--CcccCCCCCCCEEEccCCcCcccCCccccCCCCC
Q 003926 128 SRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRV--PDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENL 205 (786)
Q Consensus 128 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 205 (786)
..+..+..|++.+|... .++..+..+++|++|+|++|+++..- +..+..+++|+.|+|++|.++..-+-.+....+|
T Consensus 39 ~~~~~~~~l~~~~~~~~-~l~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L 117 (162)
T d1koha1 39 VAQNIDVVLNRRSSMAA-TLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKL 117 (162)
T ss_dssp TTTTCCCCTTSHHHHHH-HHHHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCC
T ss_pred hhccchhhcchhhhHhh-hhHHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhcccc
Confidence 33344444444444332 33334455666777777777666432 3445566777777777777664322233334457
Q ss_pred CEEEccCCcCCcCCCC--------CCCCCcCCEEE
Q 003926 206 RVLALSNNHFYGEVPD--------FSGLTYLQVLD 232 (786)
Q Consensus 206 ~~L~Ls~N~l~~~~p~--------~~~l~~L~~L~ 232 (786)
+.|++++|.++..... +..+++|+.||
T Consensus 118 ~~L~L~~Npl~~~~~~~~~y~~~i~~~~P~L~~LD 152 (162)
T d1koha1 118 EELWLDGNSLSDTFRDQSTYISAIRERFPKLLRLD 152 (162)
T ss_dssp SSCCCTTSTTSSSSSSHHHHHHHHHTTSTTCCEET
T ss_pred ceeecCCCCcCcCcccchhHHHHHHHHCCCCCEEC
Confidence 7777777777654432 34566666664
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.13 E-value=4.4e-08 Score=90.36 Aligned_cols=86 Identities=22% Similarity=0.045 Sum_probs=56.8
Q ss_pred CccCCCCCCCCEEeccCCCCCCCC--CccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCc----
Q 003926 124 SGKISRLSSLEILNMSSNFLNGAI--PQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPD---- 197 (786)
Q Consensus 124 ~~~~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~---- 197 (786)
+..+..+++|+.|+|++|+|+..- +..+..+++|+.|+|++|.++..-+-.+....+|+.|++++|.+......
T Consensus 58 ~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y 137 (162)
T d1koha1 58 RIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTY 137 (162)
T ss_dssp HHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHH
T ss_pred HHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcCcccchhH
Confidence 444456777888888888877542 34456778888888888887743332334445678888888887765442
Q ss_pred ---cccCCCCCCEEE
Q 003926 198 ---SFSYLENLRVLA 209 (786)
Q Consensus 198 ---~~~~l~~L~~L~ 209 (786)
.+..+++|+.||
T Consensus 138 ~~~i~~~~P~L~~LD 152 (162)
T d1koha1 138 ISAIRERFPKLLRLD 152 (162)
T ss_dssp HHHHHTTSTTCCEET
T ss_pred HHHHHHHCCCCCEEC
Confidence 256678888776
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=97.88 E-value=3e-05 Score=76.70 Aligned_cols=148 Identities=9% Similarity=-0.014 Sum_probs=92.2
Q ss_pred HHHHHhcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCC-CCCcceeeeeeeeccccC
Q 003926 471 ELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLR-HRHLVSALGHCFECYFDD 549 (786)
Q Consensus 471 ~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~NIv~l~g~~~~~~~~~ 549 (786)
++....+.|...+..+-++.+.||+.... +..+.||+...........+.+|+..++.+. +--+-+++.++..
T Consensus 8 ~l~~~~~~~~~~~~~~G~s~~~v~rv~~~-~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~----- 81 (263)
T d1j7la_ 8 ELKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERH----- 81 (263)
T ss_dssp HHHHHHTTSEEEECSCCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEE-----
T ss_pred HHHHhhhceEEEEcCCCCCCCcEEEEEeC-CCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEec-----
Confidence 44555556655555444455689998754 5567788876554444556788888877663 3223444544432
Q ss_pred CCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcC---------------------------
Q 003926 550 SSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTG--------------------------- 602 (786)
Q Consensus 550 ~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~--------------------------- 602 (786)
.+..++||||+++.++.+..... -. ...++.++++.++.||+.
T Consensus 82 --~~~~~lv~~~l~G~~~~~~~~~~-----~~---~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (263)
T d1j7la_ 82 --DGWSNLLMSEADGVLCSEEYEDE-----QS---PEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLA 151 (263)
T ss_dssp --TTEEEEEEECCSSEEHHHHTTTC-----SC---HHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCS
T ss_pred --CCceEEEEEeccccccccccccc-----cc---HHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhh
Confidence 35679999999998876543221 11 122334444445555531
Q ss_pred -----------------------------CCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 603 -----------------------------IVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 603 -----------------------------~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
-.+.++|+|+.+.||+++++...-|.||+.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T d1j7la_ 152 DVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp CCCGGGGSTTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred hhhhhcccccccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhcc
Confidence 01237899999999999988777799998653
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.43 E-value=1.6e-05 Score=72.91 Aligned_cols=64 Identities=16% Similarity=0.236 Sum_probs=29.4
Q ss_pred CCCCCCEEEccCC-CCccC----CCccCCCCCCCCEEeccCCCCCC----CCCccccCCCCCcEEEcccccCC
Q 003926 105 KLPDLKVLRLVSL-GLWGP----LSGKISRLSSLEILNMSSNFLNG----AIPQELSILTSLQTLILDENMLA 168 (786)
Q Consensus 105 ~l~~L~~L~L~~n-~l~g~----~~~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~ 168 (786)
+.+.|+.|+|+++ .++.. +-..+...+.|+.|+|++|.+.. .+...+...+.|+.|+|++|.++
T Consensus 13 n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~ 85 (167)
T d1pgva_ 13 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 85 (167)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred CCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcc
Confidence 4456666666653 33221 22234455556666666655542 11122233444455555544443
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.23 E-value=4.5e-05 Score=69.84 Aligned_cols=109 Identities=11% Similarity=0.091 Sum_probs=65.7
Q ss_pred CCCCCCCEEeccCC-CCCCC----CCccccCCCCCcEEEcccccCCC----CCCcccCCCCCCCEEEccCCcCccc----
Q 003926 128 SRLSSLEILNMSSN-FLNGA----IPQELSILTSLQTLILDENMLAG----RVPDWLGSLPILAVLSLRNNMFNGT---- 194 (786)
Q Consensus 128 ~~l~~L~~L~Ls~N-~l~~~----~p~~~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~---- 194 (786)
.+.++|+.|+|+++ .++.. +-..+...++|+.|+|++|.+.. .+...+...+.|+.|+|++|.++..
T Consensus 12 ~n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~ 91 (167)
T d1pgva_ 12 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 91 (167)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hCCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHH
Confidence 35678888888864 45422 23345667788888888887752 2223445567788888888877642
Q ss_pred CCccccCCCCCCEEEccCCcCCcCC----C----CCCCCCcCCEEEcccC
Q 003926 195 LPDSFSYLENLRVLALSNNHFYGEV----P----DFSGLTYLQVLDLENN 236 (786)
Q Consensus 195 ~p~~~~~l~~L~~L~Ls~N~l~~~~----p----~~~~l~~L~~L~L~~N 236 (786)
+-..+...++|+.|+|++|.+...- . .+...++|+.|+++.+
T Consensus 92 l~~aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~ 141 (167)
T d1pgva_ 92 LLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFA 141 (167)
T ss_dssp HHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCC
T ss_pred HHHHHHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHhCCCccEeeCcCC
Confidence 1223455567777777777554210 0 1333466667766554
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=97.13 E-value=0.00079 Score=65.62 Aligned_cols=75 Identities=15% Similarity=0.135 Sum_probs=49.1
Q ss_pred ccCCCCC-ceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCC--cceeeeeeeeccccCCCCceEEEEEe
Q 003926 484 FMGEGSQ-GQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRH--LVSALGHCFECYFDDSSVSRIFLIFE 560 (786)
Q Consensus 484 ~iG~G~f-g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~N--Iv~l~g~~~~~~~~~~~~~~~~LV~E 560 (786)
.+..|.. +.||+...+++..+.+|.-.... ...+.+|+..++.+.... +.++++++.. .+..++|||
T Consensus 17 ~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~---~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~-------~~~~~~v~~ 86 (255)
T d1nd4a_ 17 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTE-------AGRDWLLLG 86 (255)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEEC-------SSCEEEEEE
T ss_pred EcCCcccCCeEEEEEeCCCCEEEEEeCCccC---HhHHHHHHHHHHHHHhcCCCCCceeeeccc-------ccceEEEEE
Confidence 3445544 57999998888888889765443 234677888777664333 3445554432 345799999
Q ss_pred cCCCCChh
Q 003926 561 YVPNGTLR 568 (786)
Q Consensus 561 y~~~GsL~ 568 (786)
|+++-++.
T Consensus 87 ~i~G~~~~ 94 (255)
T d1nd4a_ 87 EVPGQDLL 94 (255)
T ss_dssp CCSSEETT
T ss_pred eeeccccc
Confidence 99876653
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.44 E-value=0.00018 Score=65.56 Aligned_cols=65 Identities=15% Similarity=0.282 Sum_probs=31.9
Q ss_pred CCCCCCCEEEccC-CCCccC----CCccCCCCCCCCEEeccCCCCCCCC----CccccCCCCCcEEEcccccCC
Q 003926 104 VKLPDLKVLRLVS-LGLWGP----LSGKISRLSSLEILNMSSNFLNGAI----PQELSILTSLQTLILDENMLA 168 (786)
Q Consensus 104 ~~l~~L~~L~L~~-n~l~g~----~~~~~~~l~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~ 168 (786)
.+.++|++|+|++ +.++.. +-..+...++|+.|+|++|.++... -..+...++|+.|++++|.+.
T Consensus 14 ~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~ 87 (166)
T d1io0a_ 14 NNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 87 (166)
T ss_dssp TTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred hcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhcccccc
Confidence 3456666666665 334221 2233445566666666666654321 122334455555555555443
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=96.05 E-value=0.011 Score=61.27 Aligned_cols=77 Identities=6% Similarity=-0.012 Sum_probs=46.7
Q ss_pred cCccCCCCCceeEEEEecC-CcEEEEEEeccc------C-CCChHHHHHHHHHHhcCC-C--CCcceeeeeeeeccccCC
Q 003926 482 SAFMGEGSQGQMYRGRLKN-GTFVAIRCLKMK------K-CHSTRNFMHHIELISKLR-H--RHLVSALGHCFECYFDDS 550 (786)
Q Consensus 482 ~~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~------~-~~~~~~f~~E~~~l~~l~-H--~NIv~l~g~~~~~~~~~~ 550 (786)
.+.||.|....||+....+ ++.|+||.-... . .........|.+.|+.+. + ..+.+++.+..
T Consensus 31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~d~------- 103 (392)
T d2pula1 31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSDT------- 103 (392)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEET-------
T ss_pred EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEEcC-------
Confidence 3578999999999998654 678999965321 1 112234456887777652 2 33445554321
Q ss_pred CCceEEEEEecCCCCCh
Q 003926 551 SVSRIFLIFEYVPNGTL 567 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL 567 (786)
+..++||||+++..+
T Consensus 104 --~~~~lvmE~L~~~~~ 118 (392)
T d2pula1 104 --EMAVTVMEDLSHLKI 118 (392)
T ss_dssp --TTTEEEECCCTTSEE
T ss_pred --CCCEEEEeccCCccc
Confidence 235799999986543
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=95.88 E-value=0.00046 Score=62.69 Aligned_cols=111 Identities=14% Similarity=0.124 Sum_probs=71.3
Q ss_pred CCCCCCCCEEeccC-CCCCCC----CCccccCCCCCcEEEcccccCCCC----CCcccCCCCCCCEEEccCCcCccc---
Q 003926 127 ISRLSSLEILNMSS-NFLNGA----IPQELSILTSLQTLILDENMLAGR----VPDWLGSLPILAVLSLRNNMFNGT--- 194 (786)
Q Consensus 127 ~~~l~~L~~L~Ls~-N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~--- 194 (786)
..+.++|+.|+|++ |.++.. +-..+...++|+.|+|++|.++.. +-..+...++|+.|++++|.+...
T Consensus 13 ~~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~ 92 (166)
T d1io0a_ 13 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGIL 92 (166)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHH
T ss_pred HhcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHH
Confidence 45678899999987 456432 234456788899999999887643 223455677888888888887532
Q ss_pred -CCccccCCCCCCEEEc--cCCcCCcC----C-CCCCCCCcCCEEEcccCC
Q 003926 195 -LPDSFSYLENLRVLAL--SNNHFYGE----V-PDFSGLTYLQVLDLENNA 237 (786)
Q Consensus 195 -~p~~~~~l~~L~~L~L--s~N~l~~~----~-p~~~~l~~L~~L~L~~N~ 237 (786)
+-..+...++|+.++| ++|.+... + ..+...++|+.|+++.+.
T Consensus 93 ~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~~ 143 (166)
T d1io0a_ 93 ALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQ 143 (166)
T ss_dssp HHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSS
T ss_pred HHHHHHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCCC
Confidence 2245566777876555 45555421 1 114456778888776654
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=95.85 E-value=0.011 Score=59.47 Aligned_cols=73 Identities=7% Similarity=0.163 Sum_probs=45.7
Q ss_pred ceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCc--ceeeeeeeeccccCCCCceEEEEEecCCCCC
Q 003926 491 GQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHL--VSALGHCFECYFDDSSVSRIFLIFEYVPNGT 566 (786)
Q Consensus 491 g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NI--v~l~g~~~~~~~~~~~~~~~~LV~Ey~~~Gs 566 (786)
-.||+.+.++|+.|++|..+... ...+++..|...+..+....| +..+...-...+ ...+..+.+++|++|..
T Consensus 36 N~vy~v~~~dg~~~VlK~~rp~~-~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~--~~~~~~~~l~~~~~G~~ 110 (325)
T d1zyla1 36 NRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLL--NHQGFYFAVFPSVGGRQ 110 (325)
T ss_dssp SEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCE--EETTEEEEEEECCCCEE
T ss_pred ceeEEEEcCCCCEEEEEEeCCCC-CCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeee--eeeeEEEEEEeecCCcC
Confidence 47999999999999999876542 346778888888877753322 111111000000 11356788999998644
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=94.19 E-value=0.049 Score=56.24 Aligned_cols=72 Identities=19% Similarity=0.230 Sum_probs=47.0
Q ss_pred CccCCCCCceeEEEEecCC--------cEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcc-eeeeeeeeccccCCCCc
Q 003926 483 AFMGEGSQGQMYRGRLKNG--------TFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLV-SALGHCFECYFDDSSVS 553 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~~g--------~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv-~l~g~~~~~~~~~~~~~ 553 (786)
+.|+.|-.-.+|+...+++ ..|.+++.-. ........+|..+++.+.-.+++ ++++++..
T Consensus 48 ~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~--~~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~--------- 116 (395)
T d1nw1a_ 48 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFN--PETESHLVAESVIFTLLSERHLGPKLYGIFSG--------- 116 (395)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECS--CCCHHHHHHHHHHHHHHHHTTSSSCEEEEETT---------
T ss_pred EEcCCccccceEEEEeCCCCccccCCCCcEEEEecCC--cchhhHHHHHHHHHHHHHhCCCCCeEEEEcCC---------
Confidence 5678788889999987532 4566665542 22334456888888887544554 66665421
Q ss_pred eEEEEEecCCCCCh
Q 003926 554 RIFLIFEYVPNGTL 567 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL 567 (786)
.+||||+++-.+
T Consensus 117 --g~I~efi~g~~l 128 (395)
T d1nw1a_ 117 --GRLEEYIPSRPL 128 (395)
T ss_dssp --EEEECCCCEEEC
T ss_pred --ceEEEEeccccC
Confidence 689999987544
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=93.23 E-value=0.11 Score=51.59 Aligned_cols=164 Identities=10% Similarity=0.115 Sum_probs=81.8
Q ss_pred ccCHHHHHHHhcCCCccCcc-----CCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcc--ee
Q 003926 466 TFSLEELEEATNNFDTSAFM-----GEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLV--SA 538 (786)
Q Consensus 466 ~~~~~~l~~~~~~f~~~~~i-----G~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv--~l 538 (786)
.++.+|++....+|..++.. ..|---+.|+....+|+ +++|+..... ..++...|+++|..+.+.++. ..
T Consensus 2 ~ls~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~g~-yVLri~~~~~--~~~~l~~~~~~l~~L~~~g~pvp~p 78 (316)
T d2ppqa1 2 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKDP-LILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLP 78 (316)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSCC-EEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred CCCHHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEECCCc-EEEEEcCCCC--CHHHHHHHHHHHHhhhhcccccccc
Confidence 35677888888888775543 35555778999887765 7888875432 223444566666665432221 11
Q ss_pred eeeeeeccccCCCCceEEEEEecCCCCChhH--------------Hhhc---CCC----CCCC-CHHH------------
Q 003926 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRS--------------WISE---GHA----HQSL-TWTQ------------ 584 (786)
Q Consensus 539 ~g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~--------------~l~~---~~~----~~~l-~~~~------------ 584 (786)
+-. ..+............++.+..+..... .++. ... .... .|..
T Consensus 79 i~~-~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (316)
T d2ppqa1 79 LPR-KDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADE 157 (316)
T ss_dssp CCB-TTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGG
T ss_pred cee-cCCCcceeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhh
Confidence 100 000000001234566777776643321 0110 000 0000 0000
Q ss_pred ----HHHHHHHHHHHhhhhh-cCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 585 ----RISAAIGVAKGIQFLH-TGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 585 ----~~~ia~~ia~gL~yLH-~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
....+......+.-.+ .....++||+|+.+.||+++++...-|.||+.+
T Consensus 158 ~~~~~~~~l~~~~~~~~~~~~~~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~ 211 (316)
T d2ppqa1 158 VEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFA 211 (316)
T ss_dssp TSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTC
T ss_pred cchhHHHHHHHHHHhhhccCccccccccccCCcchhhhhcccccceeEeccccc
Confidence 0111111111111111 223457999999999999999887789999975
|