Citrus Sinensis ID: 003928

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780------

MVAVGLKGLPSSRQRLCDLVEDSLMGGDDKSYKPGRKKKGLNRKAKKESFGFDADNSNKNSSGHGADGSASARKSWKHQNASDPKTSVVRKQVDPDLAKYFAEISNLFESNEVDLEERSVLCRNALEETRGKELELATDYIISHTLQTLLEGCDVDHLCSFLRGCAKVFPAIAMDRSGSHVAETALKSLAMHLQDEHAHSIIEETLKSICKVIVANPVDVMCNCYGSHVLRSLLCLCRGAPLDSSDFHRAKPSQILAERLNLDASQSNRNNLSYHHPVFSELSKFLISGILASSRKDLRTLQTDQYSSLVLQTALRLLVGNDPELLQIISILLGSNKDNVVEGNFIPMTVVHDVLNLMKETAYSHLMEVILEVAPQSLYDEMFTKVFRNSLFDLSSHHCANFVVQALVSHARDQDQMALIWEELGGKFRELLEMGRSGVVAALIAASQRLHTHERKCCEALAAAVSSTNVSPRCIVPGILFLESYFSCEDKSNWNWPKGIKIQIIGSLILQAVFRFPSEFIQPYVTSITSMEADHVLEAAKDAAGARVIEAYLSSKVSAKQKHRVVLKLKGHFGELSVHPSGSFTVERCFTASSLSLRETIASELSAVRNELSKTKQGPHLIRKLDIDGFTARPDQWRLKQSAKQLTYKEFYSTFGSNDTKSSRKDSFLADSSKQTSNSQGIKNMRKEIDNCLDSTALLSGKSGLKRRSEKEEHRSEKYAKHVMADDISKGKNKKKNKKNQVASEYAGPSSKGAEIAAKPFLSTDKTVKKRNRSNRPSKASKKLKP

cccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHccccccHHHHHHHHHHcccccccccHHccccHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHccccHHHHHHHHHHHcccccccccccccccHHHHHHHHHHccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHccccHHHHHHHHHHHcHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccCEEEEEccccccccccccccccccccccccHHHHHHHHHHHcccccccHHHHHHHHHHcHHHHHHHHHcccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcccccHHHHHHHcccHHHcccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccccccHHHcccHHHHHHcccccccccccccccccccccccccccccccHHHccccccccccHHHHcccccccccccccccc

***********************************************************************************************DLAKYFAEISNLFESNEVDLEERSVLCRNALEETRGKELELATDYIISHTLQTLLEGCDVDHLCSFLRGCAKVFPAIAMDRSGSHVAETALKSLAMHLQDEHAHSIIEETLKSICKVIVANPVDVMCNCYGSHVLRSLLCLCRGAPLDSSDFHRAKPSQILAERLNLDASQSNRNNLSYHHPVFSELSKFLISGILASSRKDLRTLQTDQYSSLVLQTALRLLVGNDPELLQIISILLGSNKDNVVEGNFIPMTVVHDVLNLMKETAYSHLMEVILEVAPQSLYDEMFTKVFRNSLFDLSSHHCANFVVQALVSHARDQDQMALIWEELGGKFRELLEMGRSGVVAALIAASQRLHTHERKCCEALAAAVSSTNVSPRCIVPGILFLESYFSCEDKSNWNWPKGIKIQIIGSLILQAVFRFPSEFIQPYVTSITSMEADHVLEAAKDAAGARVIEAYLSSKVSAKQKHRVVLKLKGHFGELSVHPSGSFTVERCFTASSLSLRETIASELSAVRNELSKTKQGPHLIRKLDIDGFTARPDQWRLKQSAKQLTYKEFYST************************************************************************************************************************************

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Pumilio homolog 23	Sequence-specific RNA-binding protein that regulates translation and mRNA stability by binding the 3'-UTR of target mRNAs.	probable	Q9C552

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3GVO, chain A
Confidence level:very confident
Coverage over the Query: 114-193,206-240,278-333,352-426,482-483,505-506,519,533-592
View the alignment between query and template
View the model in PyMOL

Template: 3K49, chain A
Confidence level:very confident
Coverage over the Query: 143-192,205-239,281-332,351-432,502-625
View the alignment between query and template
View the model in PyMOL

Template: 3K62, chain A
Confidence level:very confident
Coverage over the Query: 130-239,277-291,330-333,350-424,462-465,476-482,501-626
View the alignment between query and template
View the model in PyMOL

Template: 3V71, chain A
Confidence level:very confident
Coverage over the Query: 296-334,350-482,501-626
View the alignment between query and template
View the model in PyMOL