Citrus Sinensis ID: 003938

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-----

MNPLCCIAPVSIDRDRANPVVAKSTAHCQLGHETAAVKTVKPSLSAQVSSVGTDCDKSSAANVVVESVTESRYNGNGGGVSASVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQCKPFGEIHLKVSSVRASKSDDKRLTIFTGTKTLHLRCISREDRTVWIDALQAAKDLFPRLLTSTDFSPSEDVVVSTERLRLRLLQEGVGDSVIKDCESIMLSEHSDLQNQLNALQRKHIMLLGTLRQLETEKMELEATVVDETKERDSYCGQGNRRYSDFYSVMSEGSASDSDAENESQDGADVETDEDDGIFFDTNDFLSSEALRSVSYRSREAMGHACIYDKELLFSDRLRGVENEIRPIQYPYVKRRDTLPEPKEKEKPVGLWSIIKDNIGKDLSGVCLPVYFNEPLSSLQKCFEDLEYSYLVDQASAWGKQGNDLMRILNVAAFAVSGYASTEGRQCKPFNPLLGETYEADYPDKGLRFFSEKVSHHPMIVACHWKFWGRSIQLDPVGVLTLQFDDGETFQWSKVTTSIYNIILGKIYCDHYGTMRIRGSGNYSCKLKFKEQSIIDRNPHQVHGFVQDNRTGEKVAMLVGKWDEAMYYVLGDPTTKPKGYDPMTEAVLLWERGKTVTKTRYNLTPFAISLNELTPGLLDKLPPTDSRLRPDQRYLENGEYELANAEKLRLEQLQRQARQLQESGWQPSWFCKDEDGCYRYMGGYWEAREKGDWGDIAEIFGQSSDSPSCLVEE

cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEEccccCEEEEEEEEccEEEEEEcccccccccccccccccEEEccccHHHHHHccccccccccHHccccccccccccccEEEcccccccccEEEccccEEEcccccHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHccccccccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccHHHHHHHHcccHHHHHHHHHccccccHHHHHHHHHHHHHHHccccccccccccccccCEEEEECcccccCEEEEECcccccccccEEEEECccEEEEEccEEEEEEcccccEEEEEEcEEEEEEEEEEEEEEECccEEEEEcccccEEEEEEEEcccccccccEEEEEEEEcccccEEEEEEEEEcccEEEECccccccccccccccccEEEEEcccccccccccccccEEEccccccccccccccccccccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccccccEEEEcccccEEEccccHHHHccccccccccccccccccccccccc

*NPLCCIAPVSIDRDRANPVVAKSTAHC***HE***********************************************SASVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQCKPFGEIHLKVSSVR*****DKRLTIFTGTKTLHLRCISREDRTVWIDALQAAKDLFPR*********SEDVVVSTERLRLRLLQEGVGDSVIKDCESIMLSEHSDLQNQLNALQRKHIMLLGTLRQLET*********************************************************************L*********************************************YVK**************VGLWSIIKDNIGKDLSGVCLPVYFNEPLSSLQKCFEDLEYSYLVDQASAWGKQGNDLMRILNVAAFAVSGYASTEGRQCKPFNPLLGETYEADYPDKGLRFFSEKVSHHPMIVACHWKFWGRSIQLDPVGVLTLQFDDGETFQWSKVTTSIYNIILGKIYCDHYGTMRIRGSGNYSCKLKFKEQSIIDRNPHQVHGFVQDNRTGEKVAMLVGKWDEAMYYVLGDPT***KG**PMTEAVLLWERGKTVTKTRYNLTPFAISLNELTPGLLDKLPPTDSRLRPDQRYLENGEYELANAEKLRLEQLQRQARQLQESGWQPSWFCKDEDGCYRYMGGYWEAREKGDWGDIAEIFGQSS*********

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MNPLCCIAPVSIDRDRANPVVAKSTAHCQLGHETAAVKTVKPSLSAQVSSVGTDCDKSSAANVVVESVTESRYNGNGGGVSASVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQCKPFGEIHLKVSSVRASKSDDKRLTIFTGTKTLHLRCISREDRTVWIDALQAAKDLFPRLLTSTDFSPSEDVVVSTERLRLRLLQEGVGDSVIKDCESIMLSEHSDLQNQxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxRDSYCGQGNRRYSDFYSVMSEGSASDSDAENESQDGADVETDEDDGIFFDTNDFLSSEALRSVSYRSREAMGHACIYDKELLFSDRLRGVENEIRPIQYPYVKRRDTLPEPKEKEKPVGLWSIIKDNIGKDLSGVCLPVYFNEPLSSLQKCFEDLEYSYLVDQASAWGKQGNDLMRILNVAAFAVSGYASTEGRQCKPFNPLLGETYEADYPDKGLRFFSEKVSHHPMIVACHWKFWGRSIQLDPVGVLTLQFDDGETFQWSKVTTSIYNIILGKIYCDHYGTMRIRGSGNYSCKLKFKEQSIIDRNPHQVHGFVQDNRTGEKVAMLVGKWDEAMYYVLGDPTTKPKGYDPMTEAVLLWERGKTVTKTRYNLTPFAISLNELTPGLLDKLPPTDSRLRPDQRYLENGEYELxxxxxxxxxxxxxxxxxxxxxGWQPSWFCKDEDGCYRYMGGYWEAREKGDWGDIAEIFGQSSDSPSCLVEE

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Oxysterol-binding protein-related protein 1D	May be involved in the transport of sterols.	confident	Q9SAF0

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1ZHX, chain A
Confidence level:very confident
Coverage over the Query: 419-746
View the alignment between query and template
View the model in PyMOL

Template: 2D9X, chain A
Confidence level:very confident
Coverage over the Query: 80-118,157-217
View the alignment between query and template
View the model in PyMOL

Template: 2FJL, chain A
Confidence level:confident
Coverage over the Query: 83-213
View the alignment between query and template
View the model in PyMOL

Template: 2RR3, chain B
Confidence level:probable
Coverage over the Query: 340-361
View the alignment between query and template
View the model in PyMOL