Citrus Sinensis ID: 003951

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780----
MSFSCAKNFFQRFCSDELHVESVAHGSFLSSDLLPSLGARINQATKLRRYIISPFNPRYRAWEMWLVVLVVYSAWICPFEFAFLTYKKDALLIIDNIVNGFFAIDIILTFFVAYLDSQSYLLVDDPKKIAIRYMSTWFIFDVCSTAPLQFLALLLTNNISELTFRLLNMLRLWRLRRVSSLFARLEKDIRFNYFWTRCTKLVAVTLFAVHCAGCFNYLIADRYPDPEKTWIGAVYPNFKEETLWNRYVTAMYWSITTLTTTGYGDLHAENPREMLFDIFYMLFNLGLTSYIIGNMTNLVVHWTSRTRNFRETVRAVSEFATRNHLPPHIHDQMLSHICLKFKTEGLKQQETLVGLPKAIRSSIAHYLFFPIVQNVYLFQGVSHDFLFQLVSDMDAEYFPPKEDVILQNEAPTDLYILVSGAVDLIHYVDGQDKVLGKAVAGDAFGEIGVLYYRPQPFTVRTTELSQILRLSRTSLMNSIQANMEDGRIVMNNLFRKLKDQESIGFEYPTTDPGIILHECIGGPTIGSSLSARHQDYPYGDSSMWETRNLNFLGPQATDIEASKDQDSTACPVDVNSKVEDGQTELNAANQRGHIEMVKVLLEGGRNGNKPDAKGWSPKAPAEQPVNRSMYDLLLSYENRTPDEHKVEIMGPEISDNIWNTRRKHRRHEWPDVSKSHSKRESIKLGSCISSCSSGEVNKSNKKRITIHMPYQNTRTSQRHLGKLIVLPDSIEELLRIAGEKFGGYKFTKVVNAENAEIDDICVIRDGDHLFLLQNEGETMGKDVS
cccccccHHHHHHccccccccccccccccccccccccccccccccccccEEEccccccHHHHHHHHHHHHHHHHHHEEEEEEEcccccccEEEHHHHHHHHHHHHHHHHccEEEEEcccEEEECcHHHHHHHHHHcHHHHHHHHHccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccHHHHHHHccHHHHHHHHHHHcHHHHHcccccccccHHHHHHHHHHcCEEECccccEEEEccccccCEEEEEEcEEEEEEEEccccEEEEEEccccEEEccccccccccCEEEEEcccccEEEEcHHHHHHHHHHcHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccHHHHHHHcccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccccccccccccEEEEccccHHHHHHHHHHHcccccccEEEcccccEEcCEcEEEcccEEEEEEccccccccccc
*************************GSFLSSDLLPSLGARINQATKLRRYIISPFNPRYRAWEMWLVVLVVYSAWICPFEFAFLTYKKDALLIIDNIVNGFFAIDIILTFFVAYLDSQSYLLVDDPKKIAIRYMSTWFIFDVCSTAPLQFLALLLTNNISELTFRLLNMLRLWRLRRVSSLFARLEKDIRFNYFWTRCTKLVAVTLFAVHCAGCFNYLIADRYPDPEKTWIGAVYPNFKEETLWNRYVTAMYWSITTLTTTGYGDLHAENPREMLFDIFYMLFNLGLTSYIIGNMTNLVVHWTSRTRNFRETVRAVSEFATRNHLPPHIHDQMLSHICLKFKTEGLKQQETLVGLPKAIRSSIAHYLFFPIVQNVYLFQGVSHDFLFQLVSDMDAEYFPPKEDVILQNEAPTDLYILVSGAVDLIHYVDGQDKVLGKAVAGDAFGEIGVLYYRPQPFTVRTTELSQILRLSRTSLMNSIQANMEDGRIVMNNLFRKLKDQESIGFEYPTTDPGIILHECIGGPTIGSSLSARHQDYPYGDSSMWETRNLNFL********************************************VKVL**********************QPVNRSMYDLLLSY********************IW*********************************************ITIHMPYQ***TSQRHLGKLIVLPDSIEELLRIAGEKFGGYKFTKVVNAENAEIDDICVIRDGDHLFLLQN**********
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
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MSFSCAKNFFQRFCSDELHVESVAHGSFLSSDLLPSLGARINQATKLRRYIISPFNPRYRAWEMWLVVLVVYSAWICPFEFAFLTYKKDALLIIDNIVNGFFAIDIILTFFVAYLDSQSYLLVDDPKKIAIRYMSTWFIFDVCSTAPLQFLALLLTNNISELTFRLLNMLRLWRLRRVSSLFARLEKDIRFNYFWTRCTKLVAVTLFAVHCAGCFNYLIADRYPDPEKTWIGAVYPNFKEETLWNRYVTAMYWSITTLTTTGYGDLHAENPREMLFDIFYMLFNLGLTSYIIGNMTNLVVHWTSRTRNFRETVRAVSEFATRNHLPPHIHDQMLSHICLKFKTEGLKQQETLVGLPKAIRSSIAHYLFFPIVQNVYLFQGVSHDFLFQLVSDMDAEYFPPKEDVILQNEAPTDLYILVSGAVDLIHYVDGQDKVLGKAVAGDAFGEIGVLYYRPQPFTVRTTELSQILRLSRTSLMNSIQANMEDGRIVMNNLFRKLKDQESIGFEYPTTDPGIILHECIGGPTIGSSLSARHQDYPYGDSSMWETRNLNFLGPQATDIEASKDQDSTACPVDVNSKVEDGQTELNAANQRGHIEMVKVLLEGGRNGNKPDAKGWSPKAPAEQPVNRSMYDLLLSYENRTPDEHKVEIMGPEISDNIWNTRRKHRRHEWPDVSKSHSKRESIKLGSCISSCSSGEVNKSNKKRITIHMPYQNTRTSQRHLGKLIVLPDSIEELLRIAGEKFGGYKFTKVVNAENAEIDDICVIRDGDHLFLLQNEGETMGKDVS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Potassium channel KAT1 Highly selective inward-rectifying potassium channel. This voltage-gated channel could mediate long-term potassium influx into guard cells leading to stomatal opening. Assuming opened or closed conformations in response to the voltage difference across the membrane, the channel is activated by hyperpolarization. The channel activity is enhanced upon external acidification. Also permeable to ammonium ions. Blocked by tetraethylammonium and barium ions.probableQ39128
Potassium channel KAT1 Probable inward-rectifying potassium channel. Assuming opened or closed conformations in response to the voltage difference across the membrane, the channel is activated by hyperpolarization.probableQ6K3T2

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1N11, chain A
Confidence level:very confident
Coverage over the Query: 514-639
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Template: 3BEH, chain A
Confidence level:very confident
Coverage over the Query: 56-223,240-305,334-337,367-370
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View the model in PyMOL
Template: 2PTM, chain A
Confidence level:very confident
Coverage over the Query: 303-497
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View the model in PyMOL
Template: 2R9R, chain B
Confidence level:confident
Coverage over the Query: 44-227,241-304
View the alignment between query and template
View the model in PyMOL
Template: 2DNF, chain A
Confidence level:probable
Coverage over the Query: 698-775
View the alignment between query and template
View the model in PyMOL