Citrus Sinensis ID: 004064

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770------

MAGDEKDEMPMLSDSQSKSSDRNFDFRLQTFASRTRSASMSITMNSTDSFEPEANLVGLTGPLRNERRTQFLQMSGPLYSNRKPDHIFRRNQGVTGVNLVETKAEKFPSFSGMDQNDWPDDRYEAKNEHLLRSGQLGMCNDPYCTTCPTYYKATRSKHSKSSGIFDPKFHNALYGDAKGWARRFISSLQRYVPGIMNPHTRIVQQWKQFFVITCLVAIFVDPLFFFLLSVQQNNKCIVINWPWTKAIVVVRSMTDLIYFLNILLQFRLAYVAPESRVVGAGELVDHPKKIALNYLRGYFFIDFFVALPLPQIIILLVLPNILGSSGANYAKNLLRAAILLQYIPRLYKFLPLFAGQSSTGFIFESAWANFFINLFTFTLSGHIVGSGWYLFGLQRVNQCLRDACHNSSIQDCKKFLDCGHGNGGAEYSQDQTWKSWSGNQQASDCFEKDKFSYGIYEQAVKLTTENSIITRYVYSLFWGFQQISTLAGNQTPSYFVGEVLFTMAIIGVGLLLFAFLIGNMQNFLQALVKRRLDMSLRRRDVEQWMRHRRLPEQLRRQVREAERYNWAATRGVNEDMLFTNLPEDLQREIRRHLFKFVKKVRIFALMDEPILDAICERLRQKTYISGSKILYRGGLIEKMVFIVRGKMESIGEDGIAVCLSEGDACGEELLTWCLEHSSVNRDAKRYRIPGQRLLCNRTVRCLTNVEAFSLRAADIEEVTSLFARFLRSPRVQGAIRYESPYWRCRAAIVIQVAWRYRKKRLNRADTSHSLSNQSSS

cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccCCcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccCECccccHHHHHHHHHHHHHHHHHHHHccEEEEEEEccccccCEECcccccEEHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHccccEEEEEEccccccEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcEEEEEEEHHHHHHcHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccccHHHHHHcccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHcccccccccEEEEccccccEEEEEEEcEEEEEccccEEEEcccccEEcccHHHHHccccccccccccccccccccccccCEEEccEEccccccHHcHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccc

****************************************************************************************************************************************GMCNDPYCTT***********************H*****DAKGWARRFISSLQRYVPGIMNPHTRIVQQWKQFFVITCLVAIFVDPLFFFLLSVQQNNKCIVINWPWTKAIVVVRSMTDLIYFLNILLQFRLAYVAPESRVVGAGELVDHPKKIALNYLRGYFFIDFFVALPLPQIIILLVLPNILGSSGANYAKNLLRAAILLQYIPRLYKFLPLFAGQSSTGFIFESAWANFFINLFTFTLSGHIVGSGWYLFGLQRVNQCLRDACHNSSIQDCKKFLDCGHGNGGAEYSQDQTWKSWSGNQQASDCFEKDKFSYGIYEQAVKLTTENSIITRYVYSLFWGFQQISTLAGNQTPSYFVGEVLFTMAIIGVGLLLFAFLIGNMQNFLQALVKRRLDMSLRRRDVEQWMRHRRLPEQLRRQVREAERYNWAATRGVNEDMLFTNLPEDLQREIRRHLFKFVKKVRIFALMDEPILDAICERLRQKTYISGSKILYRGGLIEKMVFIVRGKMESIGEDGIAVCLSEGDACGEELLTWCLEHSS*****KRYRIPGQRLLCNRTVRCLTNVEAFSLRAADIEEVTSLFARFLRSPRVQGAIRYESPYWRCRAAIVIQVAWRYRK******************

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Probable cyclic nucleotide-gated ion channel 20, chloroplastic	Probable cyclic nucleotide-gated ion channel.	probable	Q9LD37

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1WGP, chain A
Confidence level:very confident
Coverage over the Query: 596-725
View the alignment between query and template
View the model in PyMOL

Template: 2PTM, chain A
Confidence level:very confident
Coverage over the Query: 528-673,688-735
View the alignment between query and template
View the model in PyMOL

Template: 3BEH, chain A
Confidence level:confident
Coverage over the Query: 200-272,291-393,436-438,466-531,560-563,594-595
View the alignment between query and template
View the model in PyMOL

Template: 2R9R, chain B
Confidence level:confident
Coverage over the Query: 197-271,291-393,436-438,466-532
View the alignment between query and template
View the model in PyMOL