Citrus Sinensis ID: 004090

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770----

MTVAPNISISDGNLVVHGKTILTGVPDNIILTPGNGVGLVAGAFIGATASHSKSLHVFPMGVLEDLRFMCCFRFKLWWMTQRMGTCGKDVPLETQFMLVESKDNSESDQDDGPTIYTVFLPLLEGQFRSALQGNENNEIEICLESGDNAVETNQGLYLVYTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNFPDNGCISCMCHNTDGIYSSKQTAVIRASDDYYPRDPASHTIHISSVAYNTLFLGEFMQPDWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPTRDCLFADPARDGTSLLKVWNVNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVRVTDVENMAQIAGAGWNGDAIVYAHRSGEVVRLPKGASVPVTLKVLEYELFHFCPLKEISSNISFAAIGLLDMFNSGGAVENVEVHMSEKKPDLFDGEVSSELTTSLSDNRSPTATISLKVRGCGRFGIYSSQRPLKCTVGSIQTDFTYDSATGLMTMTLPVPEEEMYRWPVEIQV

cccccEEEEEccEEEEccEEEEEcccccEEEcccccccccEEEEEEccccccccEEEEEcccccccEEEEEEEEccccccccccccccccccccEEEEEcccccccccccccccEEEEEEEEEcccEEEEEEccccccEEEEEEccccccccccEEEEEEEEccccHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHcccccHHHHHHHHHHHHcccccccEEEEEccccEEcccccccccHHHHccccccccccccccccccHHccccccccccHHHHHHHHHHcccccEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccEEEEccccHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccEEEccccccccccccccccEEEEcccccccccccccccHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHcccEEEEEcccccccHHHHHHHHccccccccccccccccccccccccccccccEEEEEcccccccEEEEEEEEccccEEEcccccccccccccEEEEEEcccccHHHHcccccccccEEEEEccccEEEEccccccEEEEEccccEEEEEEEEEEEEcccEEEEEEcccccccccccEEEEEEEEcccccccccccccccccccccccccccEEEEEEEEEcEEEEEEEccccEEEEEccEEEEEEEEccccEEEEEcccccccEEEEEEEEEc

ccccccEEEcccEEEEccEEEEccccccEEEEccccccccccEEEEEccccccccEEEEcccccccEEEEEEEEEEEHHccccccccccccHHHEEEEEEccccccccccccccEEEEEEEEccccEEEEEEcccccEEEEEEEccccccccccccEEEEEEccccHHHHHHHHHHHHHHHHccccHHHHccccHHHHccccccHHHHHccccHHHHHHHHHHHHHcccccEEEEEEccccEccccccHccccccccccHccHHccccccccHccccccccccccHHHHHHHHHHHHccccEEEEEEHHHccccccccccccHHHcccEEEccccccccccccccccHHHHHccccccccHHHHHHHHHHHHHHHHHccccEEEEcHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccEEEHcccccHHHccccccEEEEccccccccccccccHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHccccEEEEcccccccHHHHHHHccccccEEEcccccccccHHccccccccccEEEEEEEcccccEEEEEEEcccccccHHHccccccccccccEEEEEcHHHcccccccccccccccEEEEEEcccEEEEccccccEEEEEccccEEEEEEEEEEEcccccEEEEEEEHHccccccEEEEEEEEcccccccccccccccccccEEEccccccEEEEEEEEcccEEEEEEcccccEEEEccEEEEEEEcccccEEEEEEccccHcccEEEEEEEc

mtvapnisisdgnlvvhgktiltgvpdniiltpgngvgLVAGAFIGAtashskslhvfpmgvleDLRFMCCFRFKLWWMTqrmgtcgkdvpleTQFMLVeskdnsesdqddgptiyTVFLPLLEGQfrsalqgnennEIEICLesgdnavetNQGLYLVYthagpnpfEVISQAVKAVEKYMQTFTHrekkklpsfldwfgwctwdafytDVTAEGVDEGlkslsaggtppkfliiddgwqqienkpkeesnciVQEGAQFASRLTGIKENSKFQKkcqnseqvsgLKHVVDeskqnhnvKYVYVWHALAGywggvkpaadgmehydtalaypvtspgvmgnqpdiVMDSLAVhglglvhpkkvFNFYNELHAYLASCGVDGVKVDVQNIIETlgaghggrvsLTRSYHQALEASIarnfpdngciscmchntdgiysskqtavirasddyyprdpashtihiSSVAYNTLFlgefmqpdwdmfhslhpaaeyhgaaravggcaiyvsdkpgnhnfDLLRKLvlpdgsvlraqlpgrptrdclfadpardgtslLKVWNVNkcsgvvgvfncqgagwckitkktrihdespgtltasVRVTDVENMAQIAGAGWNGDAIVYAHrsgevvrlpkgasvpVTLKVLEYELfhfcplkeissniSFAAIGLLdmfnsggavenvevhmsekkpdlfdgevsselttslsdnrsptatISLKvrgcgrfgiyssqrplkctvgsiqtdftydsatglmtmtlpvpeeemyrwpveiqv

mtvapnisisdgnlvVHGKTILTGVPDNIILTPGNGVGLVAGAFIGATASHSKSLHVFPMGVLEDLRFMCCFRFKLWWMTQRMGTCGKDVPLETQFMLVESkdnsesdqddgPTIYTVFLPLLEGQFRSALQGNENNEIEICLESGDNAVETNQGLYLVYTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETlgaghggrvSLTRSYHQALEASIARNFPDNGCISCMCHNTDGIYSSKQTAVIRASDDYYPRDPASHTIHISSVAYNTLFLGEFMQPDWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRaqlpgrptrdcLFADPARDGTSLLKVWNVNKCSGVVGVFNCQGAGWCKItkktrihdespgtltasvrVTDVENMAQIAGAGWNGDAIVYAHRSGEVVRLPKGASVPVTLKVLEYELFHFCPLKEISSNISFAAIGLLDMFNSGGAVENVEVHMSEKKPDLFDGEVSSElttslsdnrsptatislkvrgCGRFGIyssqrplkctvGSIQTDFTYDSATGLMTMtlpvpeeemyrwpveiqv

********ISDGNLVVHGKTILTGVPDNIILTPGNGVGLVAGAFIGATASHSKSLHVFPMGVLEDLRFMCCFRFKLWWMTQRMGTCGKDVPLETQFMLV**************TIYTVFLPLLEGQFRSALQGNENNEIEICLESGDNAVETNQGLYLVYTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQI*********CIVQ****************************************NHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNFPDNGCISCMCHNTDGIYSSKQTAVIRASDDYYPRDPASHTIHISSVAYNTLFLGEFMQPDWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPTRDCLFADPARDGTSLLKVWNVNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVRVTDVENMAQIAGAGWNGDAIVYAHRSGEVVRLPKGASVPVTLKVLEYELFHFCPLKEISSNISFAAIGLLDMFNSGGAVENV********************************TISLKVRGCGRFGIYSSQRPLKCTVGSIQTDFTYDSATGLMTMTLPVPEEEMYRWP*****

****PNISISDGNLVVHGKTILTGVPDNIILTPGNGVGLVAGAF***********HVFPMGVLEDLRFMCCFRFKLWWMTQRMGTCGKDVPLETQFMLVESKDNSESDQDDGPTIYTVFLPLLEGQFRSALQGNENNEIEICLESGDNAVETNQGLYLVYTHAGPNPFEVISQAVKAVEKY*******EKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIK********************VVDESKQNHNVKYVYVWHALAGYWGGVKPAAD**********YPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNFPDNGCISCMCHNTDGIYSSKQTAVIRASDDYYPRDPASHTIHISSVAYNTLFLGEFMQPDWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPTRDCLFADPARDGTSLLKVWNVNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVRVTDVENMAQIAGAGWNGDAIVYAHRSGEVV******SVPVTLKVLEYELFHFCPLKEISSNISFAAIGLLDMFNSGGAVENVEVHMS**************************ATISLKVRGCGRFGIYSSQRPLKCTVGSIQTDFTYDSATGLMTMTLPVPEEEMYRWPVEIQV

MTVAPNISISDGNLVVHGKTILTGVPDNIILTPGNGVGLVAGAFIGATASHSKSLHVFPMGVLEDLRFMCCFRFKLWWMTQRMGTCGKDVPLETQFMLVE**********DGPTIYTVFLPLLEGQFRSALQGNENNEIEICLESGDNAVETNQGLYLVYTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKE***************GLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNFPDNGCISCMCHNTDGIYSSKQTAVIRASDDYYPRDPASHTIHISSVAYNTLFLGEFMQPDWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPTRDCLFADPARDGTSLLKVWNVNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVRVTDVENMAQIAGAGWNGDAIVYAHRSGEVVRLPKGASVPVTLKVLEYELFHFCPLKEISSNISFAAIGLLDMFNSGGAVENVEVHMSEKKPDLFDGEVSSELTTSLSDNRSPTATISLKVRGCGRFGIYSSQRPLKCTVGSIQTDFTYDSATGLMTMTLPVPEEEMYRWPVEIQV

**VAPNISISDGNLVVHGKTILTGVPDNIILTPGNGVGLVAGAFIGATASHSKSLHVFPMGVLEDLRFMCCFRFKLWWMTQRMGTCGKDVPLETQFMLVESKDNSESDQDDGPTIYTVFLPLLEGQFRSALQGNENNEIEICLESGDNAVETNQGLYLVYTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNFPDNGCISCMCHNTDGIYSSKQTAVIRASDDYYPRDPASHTIHISSVAYNTLFLGEFMQPDWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPTRDCLFADPARDGTSLLKVWNVNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVRVTDVENMAQIAGAGWNGDAIVYAHRSGEVVRLPKGASVPVTLKVLEYELFHFCPLKEISSNISFAAIGLLDMFNSGGAVENVEVHMSEKKPDLFDGEVSSELTTSLSDNRSPTATISLKVRGCGRFGIYSSQRPLKCTVGSIQTDFTYDSATGLMTMTLPVPEEEMYRWPVEIQV

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		774	2.2.26 [Sep-21-2011]
Q94A08		773	Probable galactinol--sucr	yes	no	0.997	0.998	0.797	0.0
Q84VX0		754	Probable galactinol--sucr	no	no	0.967	0.993	0.591	0.0
Q8RX87		749	Probable galactinol--sucr	no	no	0.953	0.985	0.540	0.0
Q5VQG4		783	Galactinol--sucrose galac	no	no	0.925	0.914	0.387	1e-149
Q9FND9		783	Probable galactinol--sucr	no	no	0.935	0.924	0.367	1e-147
Q8VWN6		798	Galactinol--sucrose galac	N/A	no	0.932	0.904	0.356	1e-142
Q93XK2		853	Stachyose synthase OS=Pis	N/A	no	0.879	0.798	0.318	1e-113
Q9SYJ4		876	Probable galactinol--sucr	no	no	0.559	0.494	0.359	6e-85
Q97U94		648	Alpha-galactosidase OS=Su	yes	no	0.501	0.598	0.279	4e-36

>sp\|Q94A08\|RFS2_ARATH Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana GN=RFS2 PE=2 SV=2	Back alignment and function desciption

 Score = 1327 bits (3435), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/775 (79%), Positives = 690/775 (89%), Gaps = 3/775 (0%)

Query: 1   MTVAPNISISDGNLVVHGKTILTGVPDNIILTPGNGVGLVAGAFIGATASHSKSLHVFPM 60
           MT+  NIS+ + NLVV GKTILT +PDNIILTP  G G V+G+FIGAT   SKSLHVFP+
Sbjct: 1   MTITSNISVQNDNLVVQGKTILTKIPDNIILTPVTGNGFVSGSFIGATFEQSKSLHVFPI 60

Query: 61  GVLEDLRFMCCFRFKLWWMTQRMGTCGKDVPLETQFMLVESKDNSESDQDDGPTIYTVFL 120
           GVLE LRFMCCFRFKLWWMTQRMG+CGKD+PLETQFML+ESKD  E + DD PT+YTVFL
Sbjct: 61  GVLEGLRFMCCFRFKLWWMTQRMGSCGKDIPLETQFMLLESKDEVEGNGDDAPTVYTVFL 120

Query: 121 PLLEGQFRSALQGNENNEIEICLESGDNAVETNQGLYLVYTHAGPNPFEVISQAVKAVEK 180
           PLLEGQFR+ LQGNE NEIEIC ESGD AVET+QG +LVY HAG NPFEVI Q+VKAVE+
Sbjct: 121 PLLEGQFRAVLQGNEKNEIEICFESGDKAVETSQGTHLVYVHAGTNPFEVIRQSVKAVER 180

Query: 181 YMQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGW 240
           +MQTF HREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLS GGTPPKFLIIDDGW
Sbjct: 181 HMQTFHHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSEGGTPPKFLIIDDGW 240

Query: 241 QQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSGLKHVVDESKQNHNV 300
           QQIENK K+E NC+VQEGAQFA+RL GIKEN+KFQK  Q   QVSGLK VVD +KQ HNV
Sbjct: 241 QQIENKEKDE-NCVVQEGAQFATRLVGIKENAKFQKSDQKDTQVSGLKSVVDNAKQRHNV 299

Query: 301 KYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVH 360
           K VY WHALAGYWGGVKPAA GMEHYD+ALAYPV SPGV+GNQPDIVMDSLAVHGLGLV+
Sbjct: 300 KQVYAWHALAGYWGGVKPAASGMEHYDSALAYPVQSPGVLGNQPDIVMDSLAVHGLGLVN 359

Query: 361 PKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNF 420
           PKKVFNFYNELH+YLASCG+DGVKVDVQNIIETLGAG GGRVSLTRSY QALEASIARNF
Sbjct: 360 PKKVFNFYNELHSYLASCGIDGVKVDVQNIIETLGAGLGGRVSLTRSYQQALEASIARNF 419

Query: 421 PDNGCISCMCHNTDGIYSSKQTAVIRASDDYYPRDPASHTIHISSVAYNTLFLGEFMQPD 480
            DNGCISCMCHNTDG+YS+KQTA++RASDD+YPRDPASHTIHI+SVAYN+LFLGEFMQPD
Sbjct: 420 TDNGCISCMCHNTDGLYSAKQTAIVRASDDFYPRDPASHTIHIASVAYNSLFLGEFMQPD 479

Query: 481 WDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPTR 540
           WDMFHSLHP AEYH AARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRA+LPGRPTR
Sbjct: 480 WDMFHSLHPTAEYHAAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAKLPGRPTR 539

Query: 541 DCLFADPARDGTSLLKVWNVNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVRV 600
           DCLFADPARDG SLLK+WN+NK +G+VGVFNCQGAGWCK TKK +IHD SPGTLT S+R 
Sbjct: 540 DCLFADPARDGISLLKIWNMNKFTGIVGVFNCQGAGWCKETKKNQIHDTSPGTLTGSIRA 599

Query: 601 TDVENMAQIAGAGWNGDAIVYAHRSGEVVRLPKGASVPVTLKVLEYELFHFCPLKEISSN 660
            D + ++Q+AG  W+GD+IVYA+RSGEVVRLPKGAS+P+TLKVLEYELFH  PLKEI+ N
Sbjct: 600 DDADLISQVAGEDWSGDSIVYAYRSGEVVRLPKGASIPLTLKVLEYELFHISPLKEITEN 659

Query: 661 ISFAAIGLLDMFNSGGAVENVEV-HMSEKKPDLFDGEVSSELTTSLSDNRSPTATISLKV 719
           ISFA IGL+DMFNS GA+E++++ H+++K P+ FDGE+SS  + +LSDNRSPTA +S+ V
Sbjct: 660 ISFAPIGLVDMFNSSGAIESIDINHVTDKNPEFFDGEISSA-SPALSDNRSPTALVSVSV 718

Query: 720 RGCGRFGIYSSQRPLKCTVGSIQTDFTYDSATGLMTMTLPVPEEEMYRWPVEIQV 774
           RGCGRFG YSSQRPLKC V S +TDFTYD+  GL+T+ LPV  EEM+RW VEI V
Sbjct: 719 RGCGRFGAYSSQRPLKCAVESTETDFTYDAEVGLVTLNLPVTREEMFRWHVEILV 773

Transglycosidase operating by a ping-pong reaction mechanism. Involved in the synthesis of raffinose, a major soluble carbohydrate in seeds, roots and tubers.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 8EC: 2

>sp\|Q84VX0\|RFS1_ARATH Probable galactinol--sucrose galactosyltransferase 1 OS=Arabidopsis thaliana GN=RFS1 PE=2 SV=1	Back alignment and function description

>sp\|Q8RX87\|RFS6_ARATH Probable galactinol--sucrose galactosyltransferase 6 OS=Arabidopsis thaliana GN=RFS6 PE=2 SV=2	Back alignment and function description

>sp\|Q5VQG4\|RFS_ORYSJ Galactinol--sucrose galactosyltransferase OS=Oryza sativa subsp. japonica GN=RFS PE=1 SV=1	Back alignment and function description

>sp\|Q9FND9\|RFS5_ARATH Probable galactinol--sucrose galactosyltransferase 5 OS=Arabidopsis thaliana GN=RFS5 PE=1 SV=1	Back alignment and function description

>sp\|Q8VWN6\|RFS_PEA Galactinol--sucrose galactosyltransferase OS=Pisum sativum GN=RFS PE=1 SV=1	Back alignment and function description

>sp\|Q93XK2\|STSYN_PEA Stachyose synthase OS=Pisum sativum GN=STS1 PE=1 SV=1	Back alignment and function description

>sp\|Q9SYJ4\|RFS4_ARATH Probable galactinol--sucrose galactosyltransferase 4 OS=Arabidopsis thaliana GN=RFS4 PE=2 SV=3	Back alignment and function description

>sp\|Q97U94\|AGAL_SULSO Alpha-galactosidase OS=Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=galS PE=1 SV=2	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		774
224138022		776	predicted protein [Populus trichocarpa]	1.0	0.997	0.858	0.0
317106767		776	JMS10C05.2 [Jatropha curcas]	1.0	0.997	0.846	0.0
225441787		774	PREDICTED: probable galactinol--sucrose	0.998	0.998	0.824	0.0
187941007		774	seed imbibition protein 1 [Vitis vinifer	0.998	0.998	0.823	0.0
449463332		772	PREDICTED: probable galactinol--sucrose	0.997	1.0	0.806	0.0
449528103		772	PREDICTED: probable galactinol--sucrose	0.997	1.0	0.807	0.0
297820552		773	ATSIP2 [Arabidopsis lyrata subsp. lyrata	0.997	0.998	0.809	0.0
312282097		772	unnamed protein product [Thellungiella h	0.996	0.998	0.8	0.0
15230330		773	putative galactinol--sucrose galactosylt	0.997	0.998	0.797	0.0
15292677		773	putative imbibition protein homolog [Ara	0.997	0.998	0.796	0.0

>gi\|224138022\|ref\|XP_002322710.1\| predicted protein [Populus trichocarpa] gi\|222867340\|gb\|EEF04471.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score = 1417 bits (3667), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 666/776 (85%), Positives = 726/776 (93%), Gaps = 2/776 (0%)

Query: 1   MTVAPNISISDGNLVVHGKTILTGVPDNIILTPGNGVGLVAGAFIGATASHSKSLHVFPM 60
           MTV P ISI+DGNL+VHGKTILTGVPDNI+LTPG+GVG VAGAFIGATASHS+SLHVFP+
Sbjct: 1   MTVTPKISINDGNLLVHGKTILTGVPDNIVLTPGSGVGPVAGAFIGATASHSQSLHVFPV 60

Query: 61  GVLEDLRFMCCFRFKLWWMTQRMGTCGKDVPLETQFMLVESKDNSES-DQDDGPTIYTVF 119
           GVLEDLRFMCCFRFKLWWMTQRMG CGKD+PLETQFMLVES++  E  DQDD  TIYTVF
Sbjct: 61  GVLEDLRFMCCFRFKLWWMTQRMGKCGKDIPLETQFMLVESRNGGEGVDQDDAQTIYTVF 120

Query: 120 LPLLEGQFRSALQGNENNEIEICLESGDNAVETNQGLYLVYTHAGPNPFEVISQAVKAVE 179
           LPLLEGQFR+ LQG++ NE+EICL+SGD+AVETNQGL LVY HAG NPFEVI+QAV AVE
Sbjct: 121 LPLLEGQFRAVLQGSDRNEMEICLDSGDSAVETNQGLNLVYMHAGTNPFEVINQAVMAVE 180

Query: 180 KYMQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDG 239
           KYMQTF HREKKKLPSFLDWFGWCTWDAFYTDVTAEGV EGL+SLS GGTPP+FLIIDDG
Sbjct: 181 KYMQTFLHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVREGLESLSEGGTPPRFLIIDDG 240

Query: 240 WQQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSGLKHVVDESKQNHN 299
           WQQIENK KE++N +VQEGAQFASRLTGIKENSKFQK C+ +EQV GLKHVVD++KQ HN
Sbjct: 241 WQQIENKAKEDANVVVQEGAQFASRLTGIKENSKFQKNCEKNEQVIGLKHVVDDAKQCHN 300

Query: 300 VKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLV 359
           VK VYVWHALAGYWGGVKPAA GMEHYDTALAYPV SPGV+GNQPD+VMDSL+VHGLGLV
Sbjct: 301 VKCVYVWHALAGYWGGVKPAAAGMEHYDTALAYPVQSPGVIGNQPDVVMDSLSVHGLGLV 360

Query: 360 HPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARN 419
           HPKKVFNFYNELHAYLASCGVDGVKVD QNIIETLGAGHGGRVSLTRSYHQALEASIARN
Sbjct: 361 HPKKVFNFYNELHAYLASCGVDGVKVDAQNIIETLGAGHGGRVSLTRSYHQALEASIARN 420

Query: 420 FPDNGCISCMCHNTDGIYSSKQTAVIRASDDYYPRDPASHTIHISSVAYNTLFLGEFMQP 479
           FPDNGCI+CMCHNTDGIYS+KQTAV+RASDD+YPRDPASHTIHISSVAYNTLFLGEFMQP
Sbjct: 421 FPDNGCIACMCHNTDGIYSAKQTAVVRASDDFYPRDPASHTIHISSVAYNTLFLGEFMQP 480

Query: 480 DWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPT 539
           DWDMFHSLHPAAEYHGAARA+GGCAIYVSDKPGNHNFDLL+KLVLPDGSVLRAQLPGRPT
Sbjct: 481 DWDMFHSLHPAAEYHGAARAIGGCAIYVSDKPGNHNFDLLKKLVLPDGSVLRAQLPGRPT 540

Query: 540 RDCLFADPARDGTSLLKVWNVNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVR 599
            D LFADPARDGTSLLK+WNVNKC+GVVGVFNCQGAGWCKI KKTRIHDE+PGTLT SV 
Sbjct: 541 LDSLFADPARDGTSLLKIWNVNKCTGVVGVFNCQGAGWCKIEKKTRIHDETPGTLTGSVC 600

Query: 600 VTDVENMAQIAGAGWNGDAIVYAHRSGEVVRLPKGASVPVTLKVLEYELFHFCPLKEISS 659
            +DV+ +AQ+ GA WNG+ +VYA++SGE+VRLPKGASVPVTLKVLEYELFHFCP+ +I+S
Sbjct: 601 ASDVDCIAQVTGAKWNGETVVYAYKSGELVRLPKGASVPVTLKVLEYELFHFCPIDDIAS 660

Query: 660 NISFAAIGLLDMFNSGGAVENVEVHM-SEKKPDLFDGEVSSELTTSLSDNRSPTATISLK 718
           NISFA IGLLDMFNSGGAVE VE+HM S+K P+ FDGEVSSELTTSLS+NR PTATI+L+
Sbjct: 661 NISFAPIGLLDMFNSGGAVEQVEIHMTSDKAPEHFDGEVSSELTTSLSENRFPTATIALR 720

Query: 719 VRGCGRFGIYSSQRPLKCTVGSIQTDFTYDSATGLMTMTLPVPEEEMYRWPVEIQV 774
           VRGCGRFG YSSQRPLKCTVG++ TDF +DSATGL+T+TLPV EEEMYRWPVEIQV
Sbjct: 721 VRGCGRFGAYSSQRPLKCTVGNVDTDFNHDSATGLLTLTLPVAEEEMYRWPVEIQV 776

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|317106767\|dbj\|BAJ53259.1\| JMS10C05.2 [Jatropha curcas]	Back alignment and taxonomy information

>gi\|225441787\|ref\|XP_002283653.1\| PREDICTED: probable galactinol--sucrose galactosyltransferase 2 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|187941007\|gb\|ACD39775.1\| seed imbibition protein 1 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|449463332\|ref\|XP_004149388.1\| PREDICTED: probable galactinol--sucrose galactosyltransferase 2-like [Cucumis sativus] gi\|91075914\|gb\|ABD52008.2\| alkaline alpha galactosidase [Cucumis sativus]	Back alignment and taxonomy information

>gi\|449528103\|ref\|XP_004171046.1\| PREDICTED: probable galactinol--sucrose galactosyltransferase 2-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|297820552\|ref\|XP_002878159.1\| ATSIP2 [Arabidopsis lyrata subsp. lyrata] gi\|297323997\|gb\|EFH54418.1\| ATSIP2 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|312282097\|dbj\|BAJ33914.1\| unnamed protein product [Thellungiella halophila]	Back alignment and taxonomy information

>gi|15230330|ref|NP_191311.1| putative galactinol--sucrose galactosyltransferase 2 [Arabidopsis thaliana] gi|269969644|sp|Q94A08.2|RFS2_ARATH RecName: Full=Probable galactinol--sucrose galactosyltransferase 2; AltName: Full=Protein SEED IMBIBITION 2; AltName: Full=Raffinose synthase 2 gi|6706423|emb|CAB66109.1| imbibition protein homolog [Arabidopsis thaliana] gi|332646144|gb|AEE79665.1| putative galactinol--sucrose galactosyltransferase 2 [Arabidopsis thaliana]

Back alignment and taxonomy information

>gi\|15292677\|gb\|AAK92707.1\| putative imbibition protein homolog [Arabidopsis thaliana]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		774
TAIR\|locus:2103488		773	SIP2 "AT3G57520" [Arabidopsis	0.997	0.998	0.797	0.0
TAIR\|locus:2020452		754	SIP1 "AT1G55740" [Arabidopsis	0.873	0.896	0.633	1.6e-259
UNIPROTKB\|Q5VQG4		783	RFS "Galactinol--sucrose galac	0.873	0.863	0.399	1.2e-138
TAIR\|locus:2170528		783	SIP1 "AT5G40390" [Arabidopsis	0.934	0.923	0.369	7.4e-137
UNIPROTKB\|Q93XK2		853	STS1 "Stachyose synthase" [Pis	0.590	0.535	0.368	4e-124
TAIR\|locus:2141425		876	STS "AT4G01970" [Arabidopsis t	0.489	0.432	0.381	1e-123
ASPGD\|ASPL0000010056		863	aglF [Emericella nidulans (tax	0.344	0.309	0.308	7.2e-37
UNIPROTKB\|G4NBB7		908	MGG_11554 "Seed imbibition pro	0.383	0.327	0.311	2.1e-31
UNIPROTKB\|Q97U94		648	galS "Alpha-galactosidase" [Su	0.237	0.283	0.348	3.6e-31
UNIPROTKB\|Q8A170		693	BT_3797 "Possible alpha-galact	0.242	0.271	0.282	1.9e-23

TAIR\|locus:2103488 SIP2 "AT3G57520" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 3379 (1194.5 bits), Expect = 0., P = 0.
 Identities = 618/775 (79%), Positives = 690/775 (89%)

Query:     1 MTVAPNISISDGNLVVHGKTILTGVPDNIILTPGNGVGLVAGAFIGATASHSKSLHVFPM 60
             MT+  NIS+ + NLVV GKTILT +PDNIILTP  G G V+G+FIGAT   SKSLHVFP+
Sbjct:     1 MTITSNISVQNDNLVVQGKTILTKIPDNIILTPVTGNGFVSGSFIGATFEQSKSLHVFPI 60

Query:    61 GVLEDLRFMCCFRFKLWWMTQRMGTCGKDVPLETQFMLVESKDNSESDQDDGPTIYTVFL 120
             GVLE LRFMCCFRFKLWWMTQRMG+CGKD+PLETQFML+ESKD  E + DD PT+YTVFL
Sbjct:    61 GVLEGLRFMCCFRFKLWWMTQRMGSCGKDIPLETQFMLLESKDEVEGNGDDAPTVYTVFL 120

Query:   121 PLLEGQFRSALQGNENNEIEICLESGDNAVETNQGLYLVYTHAGPNPFEVISQAVKAVEK 180
             PLLEGQFR+ LQGNE NEIEIC ESGD AVET+QG +LVY HAG NPFEVI Q+VKAVE+
Sbjct:   121 PLLEGQFRAVLQGNEKNEIEICFESGDKAVETSQGTHLVYVHAGTNPFEVIRQSVKAVER 180

Query:   181 YMQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGW 240
             +MQTF HREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLS GGTPPKFLIIDDGW
Sbjct:   181 HMQTFHHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSEGGTPPKFLIIDDGW 240

Query:   241 QQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSGLKHVVDESKQNHNV 300
             QQIENK K+E NC+VQEGAQFA+RL GIKEN+KFQK  Q   QVSGLK VVD +KQ HNV
Sbjct:   241 QQIENKEKDE-NCVVQEGAQFATRLVGIKENAKFQKSDQKDTQVSGLKSVVDNAKQRHNV 299

Query:   301 KYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVH 360
             K VY WHALAGYWGGVKPAA GMEHYD+ALAYPV SPGV+GNQPDIVMDSLAVHGLGLV+
Sbjct:   300 KQVYAWHALAGYWGGVKPAASGMEHYDSALAYPVQSPGVLGNQPDIVMDSLAVHGLGLVN 359

Query:   361 PKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNF 420
             PKKVFNFYNELH+YLASCG+DGVKVDVQNIIETLGAG GGRVSLTRSY QALEASIARNF
Sbjct:   360 PKKVFNFYNELHSYLASCGIDGVKVDVQNIIETLGAGLGGRVSLTRSYQQALEASIARNF 419

Query:   421 PDNGCISCMCHNTDGIYSSKQTAVIRASDDYYPRDPASHTIHISSVAYNTLFLGEFMQPD 480
              DNGCISCMCHNTDG+YS+KQTA++RASDD+YPRDPASHTIHI+SVAYN+LFLGEFMQPD
Sbjct:   420 TDNGCISCMCHNTDGLYSAKQTAIVRASDDFYPRDPASHTIHIASVAYNSLFLGEFMQPD 479

Query:   481 WDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPTR 540
             WDMFHSLHP AEYH AARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRA+LPGRPTR
Sbjct:   480 WDMFHSLHPTAEYHAAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAKLPGRPTR 539

Query:   541 DCLFADPARDGTSLLKVWNVNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVRV 600
             DCLFADPARDG SLLK+WN+NK +G+VGVFNCQGAGWCK TKK +IHD SPGTLT S+R 
Sbjct:   540 DCLFADPARDGISLLKIWNMNKFTGIVGVFNCQGAGWCKETKKNQIHDTSPGTLTGSIRA 599

Query:   601 TDVENMAQIAGAGWNGDAIVYAHRSGEVVRLPKGASVPVTLKVLEYELFHFCPLKEISSN 660
              D + ++Q+AG  W+GD+IVYA+RSGEVVRLPKGAS+P+TLKVLEYELFH  PLKEI+ N
Sbjct:   600 DDADLISQVAGEDWSGDSIVYAYRSGEVVRLPKGASIPLTLKVLEYELFHISPLKEITEN 659

Query:   661 ISFAAIGLLDMFNSGGAVENVEV-HMSEKKPDLFDGEVSSELTTSLSDNRSPTATISLKV 719
             ISFA IGL+DMFNS GA+E++++ H+++K P+ FDGE+SS  + +LSDNRSPTA +S+ V
Sbjct:   660 ISFAPIGLVDMFNSSGAIESIDINHVTDKNPEFFDGEISSA-SPALSDNRSPTALVSVSV 718

Query:   720 RGCGRFGIYSSQRPLKCTVGSIQTDFTYDSATGLMTMTLPVPEEEMYRWPVEIQV 774
             RGCGRFG YSSQRPLKC V S +TDFTYD+  GL+T+ LPV  EEM+RW VEI V
Sbjct:   719 RGCGRFGAYSSQRPLKCAVESTETDFTYDAEVGLVTLNLPVTREEMFRWHVEILV 773

GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0006979 "response to oxidative stress" evidence=IEP

GO:0080167 "response to karrikin" evidence=IEP

GO:0034484 "raffinose catabolic process" evidence=IDA

GO:0047274 "galactinol-sucrose galactosyltransferase activity" evidence=IDA

GO:0052692 "raffinose alpha-galactosidase activity" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR\|locus:2020452 SIP1 "AT1G55740" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

UNIPROTKB\|Q5VQG4 RFS "Galactinol--sucrose galactosyltransferase" [Oryza sativa Japonica Group (taxid:39947)]	Back alignment and assigned GO terms

TAIR\|locus:2170528 SIP1 "AT5G40390" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

UNIPROTKB\|Q93XK2 STS1 "Stachyose synthase" [Pisum sativum (taxid:3888)]	Back alignment and assigned GO terms

TAIR\|locus:2141425 STS "AT4G01970" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

ASPGD\|ASPL0000010056 aglF [Emericella nidulans (taxid:162425)]	Back alignment and assigned GO terms

UNIPROTKB\|G4NBB7 MGG_11554 "Seed imbibition protein" [Magnaporthe oryzae 70-15 (taxid:242507)]	Back alignment and assigned GO terms

UNIPROTKB\|Q97U94 galS "Alpha-galactosidase" [Sulfolobus solfataricus P2 (taxid:273057)]	Back alignment and assigned GO terms

UNIPROTKB\|Q8A170 BT_3797 "Possible alpha-galactosidase" [Bacteroides thetaiotaomicron VPI-5482 (taxid:226186)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q94A08	RFS2_ARATH	2, ., 4, ., 1, ., 8, 2	0.7974	0.9974	0.9987	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		774
PLN02219		775	PLN02219, PLN02219, probable galactinol--sucrose g	0.0
pfam05691		742	pfam05691, Raffinose_syn, Raffinose synthase or se	0.0
PLN02355		758	PLN02355, PLN02355, probable galactinol--sucrose g	0.0
PLN02684		750	PLN02684, PLN02684, Probable galactinol--sucrose g	0.0
PLN02711		777	PLN02711, PLN02711, Probable galactinol--sucrose g	0.0
PLN02982		865	PLN02982, PLN02982, galactinol-raffinose galactosy	1e-121
PLN02982		865	PLN02982, PLN02982, galactinol-raffinose galactosy	5e-59

>gnl\|CDD\|165863 PLN02219, PLN02219, probable galactinol--sucrose galactosyltransferase 2	Back alignment and domain information

 Score = 1557 bits (4032), Expect = 0.0
 Identities = 671/776 (86%), Positives = 723/776 (93%), Gaps = 3/776 (0%)

Query: 1   MTVAPNISISDGNLVVHGKTILTGVPDNIILTPGNGVGLVAGAFIGATASHSKSLHVFPM 60
           MTV P ISI++GNLVV GKTILTGVPDNI+LTPG+G G VAGAFIGATASHSKSLHVFP+
Sbjct: 1   MTVTPKISINNGNLVVQGKTILTGVPDNIVLTPGSGNGFVAGAFIGATASHSKSLHVFPV 60

Query: 61  GVLEDLRFMCCFRFKLWWMTQRMGTCGKDVPLETQFMLVESKDNSES-DQDDGPTIYTVF 119
           GVLE LRFMCCFRFKLWWMTQRMG+CGKD+PLETQFML+ESKD  E  + DD PTIYTVF
Sbjct: 61  GVLEGLRFMCCFRFKLWWMTQRMGSCGKDIPLETQFMLLESKDEVEGGNGDDAPTIYTVF 120

Query: 120 LPLLEGQFRSALQGNENNEIEICLESGDNAVETNQGLYLVYTHAGPNPFEVISQAVKAVE 179
           LPLLEGQFR+ LQGN+ NEIEICLESGD AVETNQGL+LVY HAG NPFEVI QAVKAVE
Sbjct: 121 LPLLEGQFRAVLQGNDKNEIEICLESGDKAVETNQGLHLVYMHAGTNPFEVIRQAVKAVE 180

Query: 180 KYMQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDG 239
           K+MQTF HREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLS GGTPPKFLIIDDG
Sbjct: 181 KHMQTFLHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSEGGTPPKFLIIDDG 240

Query: 240 WQQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSGLKHVVDESKQNHN 299
           WQQIENK K+E NC+VQEGAQFA+RLTGIKEN+KFQK  Q +EQVSGLKHVVD++KQ HN
Sbjct: 241 WQQIENKEKDE-NCVVQEGAQFATRLTGIKENAKFQKNDQKNEQVSGLKHVVDDAKQRHN 299

Query: 300 VKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLV 359
           VK VYVWHALAGYWGGVKPAA GMEHYD+ALAYPV SPGV+GNQPDIVMDSL+VHGLGLV
Sbjct: 300 VKQVYVWHALAGYWGGVKPAAAGMEHYDSALAYPVQSPGVLGNQPDIVMDSLSVHGLGLV 359

Query: 360 HPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARN 419
           +PKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSY QALEASIARN
Sbjct: 360 NPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYQQALEASIARN 419

Query: 420 FPDNGCISCMCHNTDGIYSSKQTAVIRASDDYYPRDPASHTIHISSVAYNTLFLGEFMQP 479
           F DNGCISCMCHNTDG+YS+KQTAV+RASDD+YPRDPASHTIHISSVAYNTLFLGEFMQP
Sbjct: 420 FTDNGCISCMCHNTDGLYSAKQTAVVRASDDFYPRDPASHTIHISSVAYNTLFLGEFMQP 479

Query: 480 DWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPT 539
           DWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPT
Sbjct: 480 DWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPT 539

Query: 540 RDCLFADPARDGTSLLKVWNVNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVR 599
           RDCLFADPARDGTSLLK+WNVNKC+GVVGVFNCQGAGWCKI KKTRIHD SPGTLT SV 
Sbjct: 540 RDCLFADPARDGTSLLKIWNVNKCTGVVGVFNCQGAGWCKIEKKTRIHDTSPGTLTGSVC 599

Query: 600 VTDVENMAQIAGAGWNGDAIVYAHRSGEVVRLPKGASVPVTLKVLEYELFHFCPLKEISS 659
             DV+ +AQ+AG  W+GD++VYA++SGEVVRLPKGAS+PVTLKVLEYELFHFCPLKEI++
Sbjct: 600 ADDVDQIAQVAGEDWSGDSVVYAYKSGEVVRLPKGASIPVTLKVLEYELFHFCPLKEIAT 659

Query: 660 NISFAAIGLLDMFNSGGAVENVEVHM-SEKKPDLFDGEVSSELTTSLSDNRSPTATISLK 718
           NISFA IGLLDMFNSGGAVE  E+HM S+K P+LFDGE+SSEL+TSLS+NRSPTATI+L 
Sbjct: 660 NISFAPIGLLDMFNSGGAVEQFEIHMVSDKAPELFDGEISSELSTSLSENRSPTATIALS 719

Query: 719 VRGCGRFGIYSSQRPLKCTVGSIQTDFTYDSATGLMTMTLPVPEEEMYRWPVEIQV 774
           VRGCGRFG YSSQRPLKC VGS +TDFTYD+  GL+T+TLPV EEEMYRW VEIQV
Sbjct: 720 VRGCGRFGAYSSQRPLKCAVGSTETDFTYDAEVGLLTLTLPVTEEEMYRWHVEIQV 775

Length = 775

>gnl\|CDD\|218695 pfam05691, Raffinose_syn, Raffinose synthase or seed inhibition protein Sip1	Back alignment and domain information

>gnl\|CDD\|215203 PLN02355, PLN02355, probable galactinol--sucrose galactosyltransferase 1	Back alignment and domain information

>gnl\|CDD\|166325 PLN02684, PLN02684, Probable galactinol--sucrose galactosyltransferase	Back alignment and domain information

>gnl\|CDD\|215381 PLN02711, PLN02711, Probable galactinol--sucrose galactosyltransferase	Back alignment and domain information

>gnl\|CDD\|215532 PLN02982, PLN02982, galactinol-raffinose galactosyltransferase/ghydrolase, hydrolyzing O-glycosyl compounds	Back alignment and domain information

>gnl\|CDD\|215532 PLN02982, PLN02982, galactinol-raffinose galactosyltransferase/ghydrolase, hydrolyzing O-glycosyl compounds	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		774
PLN02219		775	probable galactinol--sucrose galactosyltransferase	100.0
PLN02684		750	Probable galactinol--sucrose galactosyltransferase	100.0
PLN02355		758	probable galactinol--sucrose galactosyltransferase	100.0
PLN02982		865	galactinol-raffinose galactosyltransferase/ghydrol	100.0
PLN02711		777	Probable galactinol--sucrose galactosyltransferase	100.0
PF05691		747	Raffinose_syn: Raffinose synthase or seed imbibiti	100.0
PLN02229		427	alpha-galactosidase	100.0
PLN02692		412	alpha-galactosidase	100.0
PLN02808		386	alpha-galactosidase	100.0
PLN03231		357	putative alpha-galactosidase; Provisional	100.0
PLN02899		633	alpha-galactosidase	100.0
KOG2366		414	consensus Alpha-D-galactosidase (melibiase) [Carbo	99.94
PF02065		394	Melibiase: Melibiase; InterPro: IPR000111 O-Glycos	99.93
COG3345		687	GalA Alpha-galactosidase [Carbohydrate transport a	99.9
cd06592		303	GH31_glucosidase_KIAA1161 KIAA1161 is an uncharact	99.43
cd06593		308	GH31_xylosidase_YicI YicI alpha-xylosidase is a gl	99.1
PRK10658		665	putative alpha-glucosidase; Provisional	98.85
cd06595		292	GH31_xylosidase_XylS-like This family represents a	98.72
PRK10426		635	alpha-glucosidase; Provisional	98.68
cd06598		317	GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide	98.68
cd06599		317	GH31_glycosidase_Aec37 Glycosyl hydrolase family 3	98.62
cd06591		319	GH31_xylosidase_XylS XylS is a glycosyl hydrolase	98.61
cd06594		317	GH31_glucosidase_YihQ YihQ is a bacterial alpha-gl	98.52
cd06597		340	GH31_transferase_CtsY CtsY (cyclic tetrasaccharide	98.51
PF01055		441	Glyco_hydro_31: Glycosyl hydrolases family 31 ; In	98.46
cd06589		265	GH31 The enzymes of glycosyl hydrolase family 31 (	98.4
cd06604		339	GH31_glucosidase_II_MalA Alpha-glucosidase II (alp	98.38
cd06602		339	GH31_MGAM_SI_GAA This family includes the followin	98.38
cd06600		317	GH31_MGAM-like This family includes the following	98.29
cd06601		332	GH31_lyase_GLase GLases (alpha-1,4-glucan lyases)	98.12
COG1501		772	Alpha-glucosidases, family 31 of glycosyl hydrolas	98.1
PLN02763		978	hydrolase, hydrolyzing O-glycosyl compounds	98.01
cd06603		339	GH31_GANC_GANAB_alpha This family includes the clo	98.0
PF10566		273	Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro:	97.92
KOG1065		805	consensus Maltase glucoamylase and related hydrola	96.36
PF13200		316	DUF4015: Putative glycosyl hydrolase domain	92.24
TIGR01515		613	branching_enzym alpha-1,4-glucan:alpha-1,4-glucan	90.06
cd06596		261	GH31_CPE1046 CPE1046 is an uncharacterized Clostri	83.35

>PLN02219 probable galactinol--sucrose galactosyltransferase 2	Back alignment and domain information

Probab=100.00  E-value=1.1e-220  Score=1856.40  Aligned_cols=773  Identities=86%  Similarity=1.391  Sum_probs=741.6

Q ss_pred             CcccceeEeeCCeEEEeCeeeecCCCCCeEEeecCCCCcccceeeecccCCCCcceeeeCCCccCceeEEEeeecccccc
Q 004090            1 MTVAPNISISDGNLVVHGKTILTGVPDNIILTPGNGVGLVAGAFIGATASHSKSLHVFPMGVLEDLRFMCCFRFKLWWMT   80 (774)
Q Consensus         1 ~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lg~~~~~r~~~l~r~k~~W~~   80 (774)
                      ||||+.|+|+||+|+|+|+++|++||+||+++|.+....+.|+|+||++++++|||++|||+++++|||||||||+|||+
T Consensus         1 mt~~~~~~~~~~~l~v~g~~~l~~vp~nv~~t~~~~~~~~~g~F~G~~~~~~~srhv~~~G~l~~~rf~~~fRfK~WWmt   80 (775)
T PLN02219          1 MTVTPKISINNGNLVVQGKTILTGVPDNIVLTPGSGNGFVAGAFIGATASHSKSLHVFPVGVLEGLRFMCCFRFKLWWMT   80 (775)
T ss_pred             CcccceeEEcCCeEEECCEEeeccCCCceEecCCCCCCCCcceEEeeecCCcccceeeecccccCcEEeeeeehhhhccc
Confidence            99999999999999999999999999999999998777789999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCcccEEEEEecCCCCCC-CCCCCCeEEEEEEEeecCceEEEeecCCCCeEEEEEecCCcceeccccceEE
Q 004090           81 QRMGTCGKDVPLETQFMLVESKDNSES-DQDDGPTIYTVFLPLLEGQFRSALQGNENNEIEICLESGDNAVETNQGLYLV  159 (774)
Q Consensus        81 pr~g~~~~~ip~etq~ll~e~~~~~~l-~~~~~~~~y~v~Lpl~~g~~ra~L~~~~~~~l~i~~~sg~~~~~~~~~~~~v  159 (774)
                      ||+|++++|||.||||+|+|.++.... ..+++++.|+|+|||++|.|||+||++++++|+||+|||++.++++++..+|
T Consensus        81 ~~~G~~g~dip~eTQ~~l~e~~~~~~~~~~~~~~~~Y~~~lP~~eg~fRa~Lqg~~~~~l~iclesg~~~v~~~~~~~~v  160 (775)
T PLN02219         81 QRMGSCGKDIPLETQFMLLESKDEVEGGNGDDAPTIYTVFLPLLEGQFRAVLQGNDKNEIEICLESGDKAVETNQGLHLV  160 (775)
T ss_pred             hhhccCCCcCCcceEEEEEEcCCCccccccccCCcceEEEEeecCCceEEEecCCCCCcEEEEEecCCccccccccceEE
Confidence            999999999999999999999863211 1122345799999999999999999999999999999999999999999999


Q ss_pred             EEEeCCChHHHHHHHHHHHHHHhccccccccccCCcccccccccccccccccCCHHHHHHHHHHHHhCCCCCcEEEEecc
Q 004090          160 YTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDG  239 (774)
Q Consensus       160 ~v~~g~dp~~~i~~a~~~~~~~l~t~~~~~~k~~P~~~d~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~~~~vIIDDG  239 (774)
                      ||++|+|||++|++|++++++|+++|++|++|++|+++|+||||||||||++|||++|++++++|+++|+|++|||||||
T Consensus       161 ~~~~G~dPy~li~~a~~av~~h~~tf~~re~K~~p~~~D~~GWCTWdafy~dVt~~~I~~~l~~l~e~gip~~~viIDDG  240 (775)
T PLN02219        161 YMHAGTNPFEVIRQAVKAVEKHMQTFLHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSEGGTPPKFLIIDDG  240 (775)
T ss_pred             EEecCCCHHHHHHHHHHHHHHhcccccccccccCccccceeeEEEhhHhhccCCHHHHHHHHHHHHhCCCCceEEEEccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCcccchhhccccccccccCCCccCCcccccccCCCCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCC
Q 004090          240 WQQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPA  319 (774)
Q Consensus       240 WQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n~KFp~~~~~~~~~~GLk~~v~~Ik~~~Glk~vgvWhal~GYWgGI~P~  319 (774)
                      ||+.+++++ +.++...+|.||.+||++|++|.||++......||.|||++|++||+++|||||||||||+||||||+|+
T Consensus       241 wQsi~~~~~-~~~~~~~~g~qf~~rL~~f~en~KF~~~~~~~~fp~Glk~~V~~iK~~~~vk~V~VWHAL~GYWGGv~P~  319 (775)
T PLN02219        241 WQQIENKEK-DENCVVQEGAQFATRLTGIKENAKFQKNDQKNEQVSGLKHVVDDAKQRHNVKQVYVWHALAGYWGGVKPA  319 (775)
T ss_pred             ccccccccc-cccccccccchhhhhhccccccccccccccccCCCCcHHHHHHHHHhccCCcEEEEeeeccceecCcCCC
Confidence            999998764 5577888999999999999999999954334578999999999999999999999999999999999999


Q ss_pred             CcccccccccccccCCCCCCCCCCCcceecccccccCCccChHHHHHHHHHHHHHHHhcCCCEEEEccccchhhccCCCC
Q 004090          320 ADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHG  399 (774)
Q Consensus       320 ~~~~~~y~~~~~~p~~spg~~~~~pd~~~~~~~~~glglv~p~~~~~fyd~~~~~Las~GVD~VKvD~q~~l~~l~~~~~  399 (774)
                      +++|++|+++++||+.+||..+++||++++++..+|+++++|+++++|||+||+||+++||||||||+|+++++++.+++
T Consensus       320 ~~~~~~Y~~~~~~p~~spg~~~~~pd~a~d~l~~~G~glV~P~~~~~FYd~~hsyLas~GVDgVKVDvQ~~Le~L~~~~g  399 (775)
T PLN02219        320 AAGMEHYDSALAYPVQSPGVLGNQPDIVMDSLSVHGLGLVNPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHG  399 (775)
T ss_pred             CcccccccccccccccCCCccccCcchhhhhhhhCCccccCHHHHHHHHHHHHHHHHHcCCCEEEEchhhhHHHhhccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CchhHHHHHHHHHHHHHHhcCCCCcEEeeccCCCCCccccccccEEEecCCCCCCCccchhhHHHHHHhhhhhccCCCCC
Q 004090          400 GRVSLTRSYHQALEASIARNFPDNGCISCMCHNTDGIYSSKQTAVIRASDDYYPRDPASHTIHISSVAYNTLFLGEFMQP  479 (774)
Q Consensus       400 g~~~l~~ay~~AL~~s~~~~f~g~~iI~cMs~~~~~l~~~~~~~~~R~SdDf~p~~p~~~~~hi~~na~nsl~~g~~~~P  479 (774)
                      +|++++++||+||++|++|||+++++|+||||+++++|+.++++++|+||||||++|++|++||++|||||||||+++||
T Consensus       400 grv~la~~y~~ALe~S~~r~F~~ng~I~CMsh~~d~i~~~k~sav~R~SDDF~P~dP~sh~~Hi~~nAyNSLllg~~v~P  479 (775)
T PLN02219        400 GRVSLTRSYQQALEASIARNFTDNGCISCMCHNTDGLYSAKQTAVVRASDDFYPRDPASHTIHISSVAYNTLFLGEFMQP  479 (775)
T ss_pred             cHHHHHHHHHHHHHHHHHHhCCCCCeEEecccCchhhhcccccceeecccccccCCCccCcchhhhhhhhhHHhcccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccccCCChhHHHHHHHHHhcCCcEEeecCCCCCcHHHhhhhcCCCCceeecCCCCCCCccccccCcCCCCcceEEEEe
Q 004090          480 DWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPTRDCLFADPARDGTSLLKVWN  559 (774)
Q Consensus       480 DwDMf~s~h~~a~~HaaaraisGgPvyiSD~pg~hd~~lL~~lv~pdG~ilr~~~pg~pt~d~lf~dp~~d~~~lLki~n  559 (774)
                      |||||||.||+|+|||++||||||||||||+||+|||+||||||+|||+||||++||||||||||.||++|++++|||||
T Consensus       480 DWDMFqS~Hp~A~~HAaaRAiSGGPIYvSD~PG~Hdf~LLk~LvlpDGsIlR~~~pg~PTrDclF~Dp~~dg~slLKIwn  559 (775)
T PLN02219        480 DWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPTRDCLFADPARDGTSLLKIWN  559 (775)
T ss_pred             CchhceecCccHHHHHHHHhhcCCcEEEecCCCCccHHHHHHhhCCCCceeccccCCCcchhhhccccCCCCceEEEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecCCcceeEEEeecCCccccccccccccCCCCcceeeeeecccchhhhhhhCCCCCCcEEEEEeccceEEecCCCCeeeE
Q 004090          560 VNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVRVTDVENMAQIAGAGWNGDAIVYAHRSGEVVRLPKGASVPV  639 (774)
Q Consensus       560 ~~~~~gvlg~FN~~g~~w~~~~~~~~~~~~~~~~~~~~v~~~D~~~~~~~~~~~~~~~~~vy~~~sg~~~~l~~~~~~~v  639 (774)
                      +|+++||||+|||||++||+++++|++|+.++.++|+.|++.||+++.++++.+|+++|+||+|++|+++++++++.++|
T Consensus       560 ~n~~~gviG~FNcqGagW~~~~~~~~~~~~~~~~~s~~v~~~Dv~~i~~~a~~~w~~~~~vy~~~sg~l~~l~~~~~~~v  639 (775)
T PLN02219        560 VNKCTGVVGVFNCQGAGWCKIEKKTRIHDTSPGTLTGSVCADDVDQIAQVAGEDWSGDSVVYAYKSGEVVRLPKGASIPV  639 (775)
T ss_pred             cccccceEEEEeccCCCCCchhhccccccCCCcceEEEEcchhccchhhccccCcCCCEEEEEeccCeEEEcCCCCceEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCcEEEEEEeeeeeecCceeEEEehhhhhhcCCCceeEEEEEeccCCCCCCCCCc-ccccccccCCCCCCceEEEEE
Q 004090          640 TLKVLEYELFHFCPLKEISSNISFAAIGLLDMFNSGGAVENVEVHMSEKKPDLFDGEV-SSELTTSLSDNRSPTATISLK  718 (774)
Q Consensus       640 ~L~~~~~ei~t~~Pv~~~~~~~~~A~iGL~~k~~~~~av~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~  718 (774)
                      +|++++|||||++||+.+..+++||||||+||||++|||+++++....+.+.++++|+ .|+++++++.+......|+|+
T Consensus       640 tL~~~~~Ei~tv~Pv~~~~~~~~fApiGL~~m~n~ggAi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  719 (775)
T PLN02219        640 TLKVLEYELFHFCPLKEIATNISFAPIGLLDMFNSGGAVEQFEIHMVSDKAPELFDGEISSELSTSLSENRSPTATIALS  719 (775)
T ss_pred             EecCCcEEEEEEeeEEEecCCcEEEecchhhcccCceeeEEeEeecccccccccccccccccccccccccCCCCceEEEE
Confidence            9999999999999999999899999999999999999999999986666666677765 688888888777777789999


Q ss_pred             EEeeceeEEEEcCCCceeEECCeEeeEEEeCCceeEEEEccCCccCcceeeeEEeC
Q 004090          719 VRGCGRFGIYSSQRPLKCTVGSIQTDFTYDSATGLMTMTLPVPEEEMYRWPVEIQV  774 (774)
Q Consensus       719 vkg~G~fg~YsS~~P~~c~vdg~~~~f~y~~~~gl~t~~l~~~~~~~~~~~v~i~~  774 (774)
                      |||||+||+|||++|++|.|||++++|+|++++|||+|+||||++++++|.|||++
T Consensus       720 v~G~G~f~aYsS~~P~~c~vd~~~~~f~y~~~sg~~~~~l~~~~~~~~~~~v~~~~  775 (775)
T PLN02219        720 VRGCGRFGAYSSQRPLKCAVGSTETDFTYDAEVGLLTLTLPVTEEEMYRWHVEIQV  775 (775)
T ss_pred             EEcccceeeEecCCCeEEEECCEEeeeEEcCCCCeEEEEccCCcccCceeeEEEeC
Confidence            99999999999999999999999999999999999999999999999999999985

>PLN02684 Probable galactinol--sucrose galactosyltransferase	Back alignment and domain information

>PLN02355 probable galactinol--sucrose galactosyltransferase 1	Back alignment and domain information

>PLN02982 galactinol-raffinose galactosyltransferase/ghydrolase, hydrolyzing O-glycosyl compounds	Back alignment and domain information

>PLN02711 Probable galactinol--sucrose galactosyltransferase	Back alignment and domain information

>PF05691 Raffinose_syn: Raffinose synthase or seed imbibition protein Sip1; InterPro: IPR008811 This family consists of several raffinose synthase proteins, also known as seed imbibition (Sip1) proteins	Back alignment and domain information

>PLN02229 alpha-galactosidase	Back alignment and domain information

>PLN02692 alpha-galactosidase	Back alignment and domain information

>PLN02808 alpha-galactosidase	Back alignment and domain information

>PLN03231 putative alpha-galactosidase; Provisional	Back alignment and domain information

>PLN02899 alpha-galactosidase	Back alignment and domain information

>KOG2366 consensus Alpha-D-galactosidase (melibiase) [Carbohydrate transport and metabolism]	Back alignment and domain information

>PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3	Back alignment and domain information

>COG3345 GalA Alpha-galactosidase [Carbohydrate transport and metabolism]	Back alignment and domain information

>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase	Back alignment and domain information

>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose	Back alignment and domain information

>PRK10658 putative alpha-glucosidase; Provisional	Back alignment and domain information

>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus	Back alignment and domain information

>PRK10426 alpha-glucosidase; Provisional	Back alignment and domain information

>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY	Back alignment and domain information

>cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37	Back alignment and domain information

>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate	Back alignment and domain information

>cd06594 GH31_glucosidase_YihQ YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride	Back alignment and domain information

>cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ	Back alignment and domain information

>PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3	Back alignment and domain information

>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase	Back alignment and domain information

>cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities	Back alignment and domain information

>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase	Back alignment and domain information

>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II	Back alignment and domain information

>cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end	Back alignment and domain information

>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism]	Back alignment and domain information

>PLN02763 hydrolase, hydrolyzing O-glycosyl compounds	Back alignment and domain information

>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB)	Back alignment and domain information

>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3	Back alignment and domain information

>KOG1065 consensus Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism]	Back alignment and domain information

>PF13200 DUF4015: Putative glycosyl hydrolase domain	Back alignment and domain information

>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase	Back alignment and domain information

>cd06596 GH31_CPE1046 CPE1046 is an uncharacterized Clostridium perfringens protein with a glycosyl hydrolase family 31 (GH31) domain	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		774
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-12
1zy9_A		564	Alpha-galactosidase; TM1192, struc genomics, joint	2e-08
2yfo_A		720	Alpha-galactosidase-sucrose kinase agask; hydrolas	3e-07
3mi6_A		745	Alpha-galactosidase; NESG, structural genomics, PS	9e-07
1szn_A		417	Alpha-galactosidase; (beta/alpha)8 barrel,TWO doma	6e-05
3cc1_A		433	BH1870 protein, putative alpha-N-acetylgalactosami	7e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 69.1 bits (168), Expect = 4e-12
 Identities = 49/363 (13%), Positives = 101/363 (27%), Gaps = 116/363 (31%)

Query: 31  LTPGNGVGL--VAGAFIGATASHSKSLHVFPMGVLEDLRFMCCFRFKLWWMTQRMGTCGK 88
           L P   V +  V G+  G      K+     + V    +  C   FK++W+   +  C  
Sbjct: 147 LRPAKNVLIDGVLGS--G------KT--WVALDVCLSYKVQCKMDFKIFWLN--LKNCNS 194

Query: 89  DV----PLETQFMLVESKDNSESDQDDGPTIYTVFLPLLEGQFRSALQGNENNEIEICLE 144
                  L+     ++    S SD      +       ++ + R  L+         CL 
Sbjct: 195 PETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHS---IQAELRRLLKSKPYEN---CLL 248

Query: 145 SGDNAVETNQGL--------YLVYTHAGPNPFEVISQAVK--AVEKYMQTFTHREKKKLP 194
              N V+  +           L+ T        + +      +++ +  T T  E K L 
Sbjct: 249 VLLN-VQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL- 306

Query: 195 SFLDWFG----------------------------WCTWDAFYTDVTAEGVDEGLK-SLS 225
             L +                                TWD  +  V  + +   ++ SL+
Sbjct: 307 -LLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWD-NWKHVNCDKLTTIIESSLN 364

Query: 226 AGGTPP-------KFLIIDDG-----------WQQIENKPKEESNCIVQEGAQFASRLTG 267
               P        +  +               W    +  K +   +V +          
Sbjct: 365 V-LEPAEYRKMFDRLSVFPPSAHIPTILLSLIW---FDVIKSDVMVVVNK---LHKYSL- 416

Query: 268 IKENSK----------FQKKCQNSEQVSGLKH--VVDESKQNHNVKYVYVWHALA----- 310
           +++  K           + K +   + +   H  +VD    ++N+   +    L      
Sbjct: 417 VEKQPKESTISIPSIYLELKVKLENEYA--LHRSIVD----HYNIPKTFDSDDLIPPYLD 470

Query: 311 GYW 313
            Y+
Sbjct: 471 QYF 473

PyMOL of 1vt4

>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13 Length = 564	Back alignment and structure

>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* Length = 720	Back alignment and structure

>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis} Length = 745	Back alignment and structure

>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A* Length = 417	Back alignment and structure

>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125} Length = 433	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		774
3cc1_A		433	BH1870 protein, putative alpha-N-acetylgalactosami	100.0
1uas_A		362	Alpha-galactosidase; TIM-barrel, beta-alpha-barrel	100.0
3hg3_A		404	Alpha-galactosidase A; glycoprotein, carbohydrate-	100.0
1zy9_A		564	Alpha-galactosidase; TM1192, struc genomics, joint	100.0
3a5v_A		397	Alpha-galactosidase; beta/alpha barrel, N-glycosyl	100.0
1szn_A		417	Alpha-galactosidase; (beta/alpha)8 barrel,TWO doma	100.0
3lrk_A		479	Alpha-galactosidase 1; tetramer, GH27, glycoprotei	100.0
4do4_A		400	Alpha-N-acetylgalactosaminidase; pharmacological c	100.0
3a21_A		614	Putative secreted alpha-galactosidase; beta-alpha-	100.0
4fnq_A		729	Alpha-galactosidase AGAB; glycoside hydrolase, hyd	99.97
2xn2_A		732	Alpha-galactosidase; hydrolase, glycosidase; HET:	99.93
2yfo_A		720	Alpha-galactosidase-sucrose kinase agask; hydrolas	99.93
3mi6_A		745	Alpha-galactosidase; NESG, structural genomics, PS	99.91
2f2h_A		773	Putative family 31 glucosidase YICI; BETA8alpha8 b	99.3
2g3m_A		693	Maltase, alpha-glucosidase; hydrolase, glycoside h	99.06
4ba0_A		817	Alpha-glucosidase, putative, ADG31B; hydrolase; HE	98.99
2xvl_A		1020	Alpha-xylosidase, putative, XYL31A; hydrolase, gly	98.87
3lpp_A		898	Sucrase-isomaltase; glycoside hydrolase family 31,	98.86
3l4y_A		875	Maltase-glucoamylase, intestinal; glycoside hydrol	98.82
3nsx_A		666	Alpha-glucosidase; structural genomics, PSI-2, pro	98.8
3a24_A		641	Alpha-galactosidase; glycoside hydrolase family 97	98.6
3top_A		908	Maltase-glucoamylase, intestinal; membrane, hydrol	97.9
2d73_A		738	Alpha-glucosidase SUSB; glycoside hydrolase family	97.59
2x2h_A		1027	Alpha-1,4-glucan lyase isozyme 1; anhydrofructose	96.68
3k1d_A		722	1,4-alpha-glucan-branching enzyme; mycobacterium t	89.81
1m7x_A		617	1,4-alpha-glucan branching enzyme; alpha/beta barr	82.13
3zss_A		695	Putative glucanohydrolase PEP1A; alpha-glucan bios	80.81

>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125}	Back alignment and structure

Probab=100.00  E-value=2.2e-43  Score=396.60  Aligned_cols=382  Identities=15%  Similarity=0.183  Sum_probs=255.5

Q ss_pred             ccccccccccccccCCHHHHHHHHHHH----HhCCCCCcEEEEecccccccCCCCcccchhhccccccccccCCCccC-C
Q 004090          198 DWFGWCTWDAFYTDVTAEGVDEGLKSL----SAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKEN-S  272 (774)
Q Consensus       198 d~lGWCTWdaf~~~vte~~I~~~l~~L----~~~Gi~~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n-~  272 (774)
                      .+||||||++||+++||++|++.++.|    ++.|++  +|+||||||..+++.......    ...-...+++|.++ .
T Consensus        12 pp~gwnsW~~~~~~i~e~~i~~~ad~~~~gl~~~G~~--~~~iDDgW~~~~~~~~~y~~~----~~~~~d~~G~~~~~~~   85 (433)
T 3cc1_A           12 PPMGWNSWDCYGASVTEEEVLGNAEYMANHLKKYGWE--YIVVDIQWYEPTANSSAYNPF----APLCMDEYGRLLPATN   85 (433)
T ss_dssp             CCEEEESHHHHTTCCCHHHHHHHHHHHHHHTGGGTCC--EEEECSCTTCCCTTSTTCCTT----SCSCBCTTSCBCCCTT
T ss_pred             CCEEEEChhhhCCcCCHHHHHHHHHHHHhcchhhCCe--EEEECCCcCCCCCcccccccc----cccccCCCCCEeECCc
Confidence            469999999999999999999999999    666655  999999999875442100000    00001236777865 7


Q ss_pred             cccccccCCCCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCCccccc-cccc-ccccCCCCCCCCCCCcceecc
Q 004090          273 KFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEH-YDTA-LAYPVTSPGVMGNQPDIVMDS  350 (774)
Q Consensus       273 KFp~~~~~~~~~~GLk~~v~~Ik~~~Glk~vgvWhal~GYWgGI~P~~~~~~~-y~~~-~~~p~~spg~~~~~pd~~~~~  350 (774)
                      |||+.    ..+.||++++++||+ +||| +|||+.+.-.+.++.|++++... |..+ +..|....   ...+.     
T Consensus        86 kFP~~----~~~~Gl~~l~~~ih~-~Glk-~Giw~~p~i~~~~v~~~s~~~~~~~~~~di~~~~~~~---~~~~~-----  151 (433)
T 3cc1_A           86 RFPSA----KNGAGFKPLSDAIHD-LGLK-FGIHIMRGIPRQAVYENSPVLGSTKTAREIAHTNSIC---PWNTD-----  151 (433)
T ss_dssp             TCGGG----TTTTTTHHHHHHHHH-TTCE-EEEEEESSEEHHHHHHTCBCTTSSCBHHHHEETTCCB---TTBTT-----
T ss_pred             cCCCc----ccCCCHHHHHHHHHH-cCCe-eEEEeCCCCchhccCCCCccccccceecccccCCccc---CCCCC-----
Confidence            89832    122399999999999 6999 99998873222244565543211 1100 00000000   00000     


Q ss_pred             cccccCCccChHHHHHHHHHHHHHHHhcCCCEEEEccccchhhccCCCCCchhHHHHHHHHHHHHHHhcCCCCcEEeecc
Q 004090          351 LAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNFPDNGCISCMC  430 (774)
Q Consensus       351 ~~~~glglv~p~~~~~fyd~~~~~Las~GVD~VKvD~q~~l~~l~~~~~g~~~l~~ay~~AL~~s~~~~f~g~~iI~cMs  430 (774)
                        ..++++.+|+ ++.||+.++++|++|||||||+|+|+.. .+. ++  ..+..++|++||+++      +++|+.|||
T Consensus       152 --~~~lD~~~p~-~~~~~~~~~~~l~~~GvDyvK~D~~~~~-~~~-~~--~~~~~~~~~~aL~~~------gr~i~~slc  218 (433)
T 3cc1_A          152 --MYGVDPTKEG-AQSYYNSLFELYAQWGVDFVKVDDIAAS-RLY-DT--HLEEIKMIQRAIQAC------GRPMVLSLS  218 (433)
T ss_dssp             --EEEECTTSTT-HHHHHHHHHHHHHHTTCCEEEEESCSCT-TSS-CC--CHHHHHHHHHHHHHS------SSCCEEECC
T ss_pred             --ceeecCCCHH-HHHHHHHHHHHHHHcCCCEEEeCCcccc-cCC-cc--cHHHHHHHHHHHHhc------CCCEEEEec
Confidence              1235566665 8999999999999999999999999852 221 11  346677888888753      789999999


Q ss_pred             CCCCC----ccccccccEEEecCCCCCCCccchhhHHHHHHhhhhhccCCCCCCCccccCCC------------------
Q 004090          431 HNTDG----IYSSKQTAVIRASDDYYPRDPASHTIHISSVAYNTLFLGEFMQPDWDMFHSLH------------------  488 (774)
Q Consensus       431 ~~~~~----l~~~~~~~~~R~SdDf~p~~p~~~~~hi~~na~nsl~~g~~~~PDwDMf~s~h------------------  488 (774)
                      +++..    .+..+++++||+|+|++|.|+....+ +..+++.+.++++++|||+|||+++|                  
T Consensus       219 ~g~~~~~~~~~~~~~~n~wR~s~D~~~~w~~~~~~-~~~~~~~~~~~~~g~~nD~Dml~vg~~g~~~~~~~~~~~~~~lt  297 (433)
T 3cc1_A          219 PGPAPIKYAHHFKTNANMWRITDDFWDDWSLLYQM-FERCEVWEKHIGTGHWPDCGMLPLGHIGIRSVDGPGGDRWTRFT  297 (433)
T ss_dssp             CSBSSEESCSSSCCTTGGGCCEECCCSCHHHHHHH-HHHHHHHHHSCCCSCCCBCCCBCCSEECTTCSSSSSSSEECSSC
T ss_pred             CCCCChhhhhhhhhhCcEEEeccCccccHHHHHHH-HHHHHHHHhhcCCCccCChHHhcccCccccccccccccccCCCC
Confidence            86322    24568899999999999999875432 22345667788889999999999985                  


Q ss_pred             -hhHHHHHHHHHhcCCcEEeecCCCCCc---HHHhh--hh--cCCCCceeecCCCCCCCccccccCcCCCCcceEEEEee
Q 004090          489 -PAAEYHGAARAVGGCAIYVSDKPGNHN---FDLLR--KL--VLPDGSVLRAQLPGRPTRDCLFADPARDGTSLLKVWNV  560 (774)
Q Consensus       489 -~~a~~HaaaraisGgPvyiSD~pg~hd---~~lL~--~l--v~pdG~ilr~~~pg~pt~d~lf~dp~~d~~~lLki~n~  560 (774)
                       .+.++|+++|||+++||++||.+.+.+   ++||+  .+  +.+||...|      |.    +.    ++  -+.||..
T Consensus       298 ~~E~rt~~alwai~~spL~ig~dl~~~~~~~~~lL~N~eviavnqdg~~~~------~v----~~----~~--~~~vw~~  361 (433)
T 3cc1_A          298 KDEQLTMMNLWAICHSPLMFGGELRDNDEWTLSLLTNEGILSINQKSVLNR------FV----YR----EE--DKVAWAA  361 (433)
T ss_dssp             HHHHHHHHHHHHHTTCCEEECSCGGGCCHHHHHHHCCHHHHHHHHHCEEEE------EE----EE----ET--TEEEEEE
T ss_pred             HHHHHHHHHHHHHhcCceEecCccccCCHHHHHHhcChhheeecCCCcCce------ee----Ee----cC--CcEEEEE
Confidence             457889999999999999999988766   44444  22  225664433      21    11    11  2566755


Q ss_pred             c--CCcceeEEEeecCCccccccccccccCCCCcceeeeeecccchhhhhhhCCCCCCcEEEEEeccce-EEecCCCCee
Q 004090          561 N--KCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVRVTDVENMAQIAGAGWNGDAIVYAHRSGE-VVRLPKGASV  637 (774)
Q Consensus       561 ~--~~~gvlg~FN~~g~~w~~~~~~~~~~~~~~~~~~~~v~~~D~~~~~~~~~~~~~~~~~vy~~~sg~-~~~l~~~~~~  637 (774)
                      .  .+.-+|++||.....                 .+-.++.+|+.         ..+.|-|+.--+++ +.....+..+
T Consensus       362 ~l~~g~~~val~N~~~~~-----------------~~~~~~~~~lg---------l~~~~~v~Dlw~~~~~g~~~~~~~~  415 (433)
T 3cc1_A          362 NGRNGEAYVALFNLHDQQ-----------------KTLQFRLDMVG---------IMETVQLFNVWDRSFLQSLAPSESF  415 (433)
T ss_dssp             ECSSSCEEEEEEECSSSC-----------------EEEEECGGGTT---------CCSCEEEEETTTTEEEEEECTTCCE
T ss_pred             ECCCCCEEEEEEeCCCCC-----------------EEEEEEHHHcC---------CCCceEEEECCCCCccccccCCceE
Confidence            3  455689999965421                 12224444442         12367788877776 4444333489


Q ss_pred             eEEecCCcEEEEEEeeee
Q 004090          638 PVTLKVLEYELFHFCPLK  655 (774)
Q Consensus       638 ~v~L~~~~~ei~t~~Pv~  655 (774)
                      +++|++.++.+|.+.|.+
T Consensus       416 ~~~v~~hg~~l~~l~~~~  433 (433)
T 3cc1_A          416 QIELKPHQSMMLKLSPDR  433 (433)
T ss_dssp             EEEECTTCEEEEEEEECC
T ss_pred             EEEECCCcEEEEEEEeCC
Confidence            999999999999999853

PyMOL of 3cc1

>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1	Back alignment and structure

>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A*	Back alignment and structure

>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13	Back alignment and structure

>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea}	Back alignment and structure

>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A*	Back alignment and structure

>3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A*	Back alignment and structure

>4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A*	Back alignment and structure

>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A*	Back alignment and structure

>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A*	Back alignment and structure

>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A*	Back alignment and structure

>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A*	Back alignment and structure

>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis}	Back alignment and structure

>2f2h_A Putative family 31 glucosidase YICI; BETA8alpha8 barrel, hydrolase; HET: MPO XTG; 1.95A {Escherichia coli} SCOP: b.150.1.1 b.30.5.11 b.71.1.4 c.1.8.13 PDB: 1xsj_A 1xsi_A 1xsk_A* 1we5_A*	Back alignment and structure

>2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A*	Back alignment and structure

>4ba0_A Alpha-glucosidase, putative, ADG31B; hydrolase; HET: 5GF PGE ARG; 1.85A {Cellvibrio japonicus} PDB: 4b9z_A* 4b9y_A*	Back alignment and structure

>2xvl_A Alpha-xylosidase, putative, XYL31A; hydrolase, glycosyl hydrolase family 31, (beta/alpha)8 barre; HET: PXN; 2.30A {Cellvibrio japonicus} PDB: 2xvg_A* 2xvk_A*	Back alignment and structure

>3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A*	Back alignment and structure

>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A*	Back alignment and structure

>3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A*	Back alignment and structure

>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}	Back alignment and structure

>3top_A Maltase-glucoamylase, intestinal; membrane, hydrolase-hydrolase inhibitor complex; HET: ACR; 2.88A {Homo sapiens} PDB: 3ton_A*	Back alignment and structure

>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*	Back alignment and structure

>2x2h_A Alpha-1,4-glucan lyase isozyme 1; anhydrofructose pathway, glycoside hydrolase family 3 starch binding domain; 2.06A {Gracilariopsis lemaneiformis} PDB: 2x2i_A* 2x2j_A*	Back alignment and structure

>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}	Back alignment and structure

>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*	Back alignment and structure

>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A*	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		774
d1szna2		314	c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [T	2e-15
d1zy9a2		348	c.1.8.13 (A:178-525) Alpha-galactosidase GalA cata	2e-12
d1uasa2		273	c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [	8e-06
d1r46a2		292	c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens)	8e-06
d1ktba2		293	c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallu	0.002

>d1szna2 c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [TaxId: 51453]} Length = 314	Back information, alignment and structure


class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Melibiase
species: Trichoderma reesei [TaxId: 51453]

 Score = 76.1 bits (186), Expect = 2e-15
 Identities = 47/329 (14%), Positives = 93/329 (28%), Gaps = 64/329 (19%)

Query: 200 FGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPP---KFLIIDDGWQQIENKPKEESNCIVQ 256
            GW +W+A++ D+         + + + G       ++ IDD W   + +          
Sbjct: 14  LGWNSWNAYHCDIDESKFLSAAELIVSSGLLDAGYNYVNIDDCWSMKDGR---------V 64

Query: 257 EGAQFASRLTGIKENSKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGV 316
           +G    +        ++F           G+  +  +         + ++          
Sbjct: 65  DGHIAPNA-------TRFP---------DGIDGLAKKVHALG--LKLGIYSTAGTATCAG 106

Query: 317 KPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLA 376
            PA+ G E  D                        A  G+  +      N  ++      
Sbjct: 107 YPASLGYEDVDA--------------------ADFADWGVDYLKYD-NCNVPSDWQDEYV 145

Query: 377 SCGVDGVKVDVQNIIETLG------AGHGGRVSLTRSYHQALEASIARNFPDNGCISCMC 430
           +C  D VK        T         G+    S +     A+  ++A+   +     C+ 
Sbjct: 146 ACNPDFVKTGPNGTCTTALDPTLAPPGYDWSTSKSAERFGAMRNALAKQSHEIVLSMCIW 205

Query: 431 HNTDGIYSSKQTA-VIRASDDYYPRDPASHTIHISSVAYNTLFLGEFMQPDWDMFH---- 485
              D       T    R SDD  P   +   I ++  ++    +  +   D DM      
Sbjct: 206 GQADVFSWGNSTGISWRMSDDISPNWGSVTRI-LNLNSFKLNSVDFWGHNDADMLEVGNG 264

Query: 486 SLHPAAEY-HGAARAVGGCAIYVSDKPGN 513
           +L  A    H A  A     + +      
Sbjct: 265 NLTAAETRTHFALWAAMKSPLLIGTDLAQ 293

PyMOL of d1szna2

>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} Length = 348	Back information, alignment and structure

>d1uasa2 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} Length = 273	Back information, alignment and structure

>d1r46a2 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) [TaxId: 9606]} Length = 292	Back information, alignment and structure

>d1ktba2 c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} Length = 293	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		774
d1szna2		314	Melibiase {Trichoderma reesei [TaxId: 51453]}	100.0
d1uasa2		273	Melibiase {Rice (Oryza sativa) [TaxId: 4530]}	100.0
d1r46a2		292	Melibiase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1zy9a2		348	Alpha-galactosidase GalA catalytic domain {Thermot	100.0
d1ktba2		293	Melibiase {Chicken (Gallus gallus) [TaxId: 9031]}	99.98
d2f2ha4		338	Putative glucosidase YicI, domain 2 {Escherichia c	99.14
d1gcya2		357	G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase	86.66
d1g5aa2		554	Amylosucrase {Neisseria polysaccharea [TaxId: 489]	83.48

>d1szna2 c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [TaxId: 51453]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Melibiase
species: Trichoderma reesei [TaxId: 51453]

Probab=100.00  E-value=6.5e-38  Score=332.51  Aligned_cols=271  Identities=18%  Similarity=0.224  Sum_probs=201.8

Q ss_pred             cccccccccccccCCHHHHHHHHHHHHhCCCC---CcEEEEecccccccCCCCcccchhhccccccccccCCCccC-Ccc
Q 004090          199 WFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTP---PKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKEN-SKF  274 (774)
Q Consensus       199 ~lGWCTWdaf~~~vte~~I~~~l~~L~~~Gi~---~~~vIIDDGWQ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~n-~KF  274 (774)
                      +||||||++||+++||++|++.++.|++.|++   +++|+||||||..+++.                 +++|.++ +||
T Consensus        13 p~GwnSW~~~~~~i~e~~i~~~a~~l~e~gl~~~G~~~~~iDdGW~~~~~~~-----------------~G~~~~d~~kF   75 (314)
T d1szna2          13 SLGWNSWNAYHCDIDESKFLSAAELIVSSGLLDAGYNYVNIDDCWSMKDGRV-----------------DGHIAPNATRF   75 (314)
T ss_dssp             CEEEESHHHHTTCCCHHHHHHHHHHHHHTTHHHHTCCEEECCSSCBCTTCCB-----------------TTBCCBCTTTC
T ss_pred             CCcccchhhhcccCCHHHHHHHHHHHHHcCccccCcEEEEECCCccCCCCCC-----------------CCCeeeCHhhc
Confidence            58999999999999999999999999988753   57999999999876552                 3556754 788


Q ss_pred             cccccCCCCCCChHHHHHHHHhcCCCcEEEEEeecccccCCcCCCCcccccccccccccCCCCCCCCCCCcceecccccc
Q 004090          275 QKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVH  354 (774)
Q Consensus       275 p~~~~~~~~~~GLk~~v~~Ik~~~Glk~vgvWhal~GYWgGI~P~~~~~~~y~~~~~~p~~spg~~~~~pd~~~~~~~~~  354 (774)
                      |         +|||+++++||+ +|+| +|+|+++.++|...+|+....+......                    ....
T Consensus        76 P---------~Gl~~~~~~i~~-~G~k-~Giw~~p~~~~~~~~p~~~~~~~~~~~~--------------------~~~~  124 (314)
T d1szna2          76 P---------DGIDGLAKKVHA-LGLK-LGIYSTAGTATCAGYPASLGYEDVDAAD--------------------FADW  124 (314)
T ss_dssp             T---------THHHHHHHHHHH-TTCE-EEEEEESSSBCTTSCBCCTTCHHHHHHH--------------------HHHT
T ss_pred             C---------CchHHHHHHHHh-cCCe-EEEeecccccccCCCcccccccccchhh--------------------hhhc
Confidence            8         899999999999 7999 8999999988887777653211111000                    0012


Q ss_pred             cCCccChHHHHHHHHHHHHHHHhcCCCEEEEccccchhhccC------CCCCchhHHHHHHHHHHHHHHhcCCCCcEEee
Q 004090          355 GLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGA------GHGGRVSLTRSYHQALEASIARNFPDNGCISC  428 (774)
Q Consensus       355 glglv~p~~~~~fyd~~~~~Las~GVD~VKvD~q~~l~~l~~------~~~g~~~l~~ay~~AL~~s~~~~f~g~~iI~c  428 (774)
                      |+++.+| +++.+++.++..++++||||+|+|.+........      +...........+.++.+++++.+++..+..|
T Consensus       125 ~~d~~~~-d~~~~~~~~~~~~~~~g~d~~K~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~c  203 (314)
T d1szna2         125 GVDYLKY-DNCNVPSDWQDEYVACNPDFVKTGPNGTCTTALDPTLAPPGYDWSTSKSAERFGAMRNALAKQSHEIVLSMC  203 (314)
T ss_dssp             TCCEEEE-ECCCCCGGGSCSSBCCCTTTSCCBGGGBCCTTTCTTBCCTTCCGGGSHHHHHHHHHHHHHHTSSSCCEEEEC
T ss_pred             CCccccc-hHHHHHHHHHHHHHHhCCceEEecccccchhccCcccCccccCcchhhHHHHHHHHHHHHHHhCCCeEEEec
Confidence            3333333 3456777777788999999999999875432211      11111223344455667778887777777888


Q ss_pred             ccCCCCC-ccccccccEEEecCCCCCCCccchhhHHHHHHhhhhhccCCCCCCCccccCCC-----hhHHHHHHHHHhcC
Q 004090          429 MCHNTDG-IYSSKQTAVIRASDDYYPRDPASHTIHISSVAYNTLFLGEFMQPDWDMFHSLH-----PAAEYHGAARAVGG  502 (774)
Q Consensus       429 Ms~~~~~-l~~~~~~~~~R~SdDf~p~~p~~~~~hi~~na~nsl~~g~~~~PDwDMf~s~h-----~~a~~HaaaraisG  502 (774)
                      |++.... .+...+++++|+|+|++|.|...+. ++..++++..+.+...|||+||++.++     .+.++|+++||++|
T Consensus       204 ~~~~~~~~~~~~~~~~~~R~s~D~~~~w~~~~~-~~~~~~~~~~~~~~~~~~DpDml~~g~~~lt~~e~r~~~sl~a~~~  282 (314)
T d1szna2         204 IWGQADVFSWGNSTGISWRMSDDISPNWGSVTR-ILNLNSFKLNSVDFWGHNDADMLEVGNGNLTAAETRTHFALWAAMK  282 (314)
T ss_dssp             CTTGGGHHHHGGGTCSEEECSSCCCSSHHHHHH-HHHHHHTCGGGCBTTBEEECCSCCTTCTTCCHHHHHHHHHHHHHTT
T ss_pred             CCCCCCchhhhhhcccceeecCCcccccchHHH-HHHHHHHHHHHhcCCccCCchhcccCCCCCCHHHHHHHHHHHHHHh
Confidence            8876443 2456788999999999999987654 677889999888999999999998865     36789999999999


Q ss_pred             CcEEeecCCCCCc---HHHh
Q 004090          503 CAIYVSDKPGNHN---FDLL  519 (774)
Q Consensus       503 gPvyiSD~pg~hd---~~lL  519 (774)
                      +|++|||.+.+.+   .++|
T Consensus       283 ~pl~~g~dl~~~~~~~~~ll  302 (314)
T d1szna2         283 SPLLIGTDLAQLSQNNINLL  302 (314)
T ss_dssp             CCEEECSCGGGCCHHHHHHH
T ss_pred             CchhccCCcccCCHHHHHHh
Confidence            9999999876554   4555

PyMOL of d1szna2

>d1uasa2 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [TaxId: 4530]}	Back information, alignment and structure

>d1r46a2 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d1ktba2 c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]}	Back information, alignment and structure

>d2f2ha4 c.1.8.13 (A:248-585) Putative glucosidase YicI, domain 2 {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]}	Back information, alignment and structure

>d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]}	Back information, alignment and structure