Citrus Sinensis ID: 004157
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 771 | 2.2.26 [Sep-21-2011] | |||||||
| Q55GS2 | 813 | Probable inactive serine/ | yes | no | 0.653 | 0.619 | 0.380 | 1e-104 | |
| Q96KG9 | 808 | N-terminal kinase-like pr | yes | no | 0.645 | 0.616 | 0.382 | 1e-100 | |
| A6QLH6 | 807 | N-terminal kinase-like pr | yes | no | 0.647 | 0.618 | 0.379 | 8e-99 | |
| Q561M0 | 827 | N-terminal kinase-like pr | N/A | no | 0.699 | 0.651 | 0.358 | 1e-97 | |
| Q28FH2 | 827 | N-terminal kinase-like pr | yes | no | 0.789 | 0.736 | 0.338 | 2e-97 | |
| Q5M9F8 | 807 | N-terminal kinase-like pr | yes | no | 0.645 | 0.617 | 0.386 | 5e-97 | |
| Q9EQC5 | 806 | N-terminal kinase-like pr | yes | no | 0.647 | 0.619 | 0.374 | 7e-97 | |
| O13733 | 637 | Protein kinase domain-con | yes | no | 0.649 | 0.786 | 0.256 | 5e-33 | |
| Q9DBQ7 | 735 | Protein-associating with | no | no | 0.470 | 0.493 | 0.287 | 5e-31 | |
| Q8IZE3 | 742 | Protein-associating with | no | no | 0.574 | 0.597 | 0.266 | 2e-29 |
| >sp|Q55GS2|SCY1_DICDI Probable inactive serine/threonine-protein kinase scy1 OS=Dictyostelium discoideum GN=scy1 PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 378 bits (971), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/554 (38%), Positives = 321/554 (57%), Gaps = 50/554 (9%)
Query: 4 FLKGVVGGSGAGVKDLPYNIGDPYPSAWGS--WSHFQGTSKDDGSPVSIFSISGTNAQDG 61
++ ++G + + PYNIG G W+ GT K+DGS VSIFS
Sbjct: 2 YIFKLMGQNLTASQSFPYNIGPIVTGYVGKSIWTLHSGTKKEDGSAVSIFSFD-IKKNPS 60
Query: 62 HLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGL 121
L A+NG KR +T RHPN+L +L D T+ IYIVTEP+ L E ++++
Sbjct: 61 KLEVAKNGFKRAKTTRHPNVLKYL--------DGLETETNIYIVTEPIQLLDELLEDI-- 110
Query: 122 EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181
+ +WGL Q + +SFLNN C L HGN+ SS+ V + DW++ D +S+
Sbjct: 111 --RNFENAISWGLYQ--EGLSFLNNKCNLTHGNIQSSSIFVNKGGDWQIGGLDFVSDVKD 166
Query: 182 NNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLS 241
N N + + L+ +YK E+ KS W +++SP +SIDSW LGCL+YE ++G ++
Sbjct: 167 IN---NSILRNHNDLIPNKYKSPEIMKSQWQQIQQSPSYSIDSWMLGCLMYECYNGT-MT 222
Query: 242 KTEELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKLVDTIHFMEILNLK 301
K E+++N IPK L YQ+ + RLN K +E S YFQN V+T+ F+E + LK
Sbjct: 223 KAEDIKNLDQIPKQLHQAYQKSFAVKTESRLNPQKFLE-SPYFQNVFVETLVFLENITLK 281
Query: 302 DSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLSTEE 361
D+ EK+ FF+KL E++P I K+LP L +A + G L+ LLK+GS LSTEE
Sbjct: 282 DTFEKEQFFKKLDQHIEKIPINICKFKILPHLVTAFDLGPVNPRLLSTLLKIGSNLSTEE 341
Query: 362 FSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLR 421
++ +++P++VK FA +DRA+R+ LL++++ Y Q + +++Q++PHV GF D L+
Sbjct: 342 YNSRIVPSVVKWFACDDRALRINLLENLEHYIQHLNEATINDQIFPHVVNGFNDNPT-LK 400
Query: 422 EMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKR 481
E+T+KSML+ APKL ++T+ LLKY + LQ D++ +R NTTI LG I ++NE T+KR
Sbjct: 401 ELTIKSMLLFAPKLQEKTMI-ILLKYFAALQKDQQAGVRCNTTICLGRITEYMNEATKKR 459
Query: 482 VLINAFTVRALRDTFSPARGAA-------------------------KILSYLNCDVRSK 516
VLI AF+ AL+D F P++ AA ++L +R+
Sbjct: 460 VLIPAFST-ALKDPFVPSQNAAIQAFMFTISNYSLEELATRVIPEVSRMLISPEKSIRTS 518
Query: 517 AFQAVDQFLQIVKQ 530
AF A++ FLQ +++
Sbjct: 519 AFTAINMFLQKIEK 532
|
Dictyostelium discoideum (taxid: 44689) |
| >sp|Q96KG9|NTKL_HUMAN N-terminal kinase-like protein OS=Homo sapiens GN=SCYL1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 367 bits (941), Expect = e-100, Method: Compositional matrix adjust.
Identities = 212/554 (38%), Positives = 307/554 (55%), Gaps = 56/554 (10%)
Query: 16 VKDLPYNIGDPYPSAW--GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRL 73
V+D P+ + P G W+ +G K GSPVSIF + A+ KR
Sbjct: 9 VRDFPFELIPEPPEGGLPGPWALHRGRKKATGSPVSIFVYDVKPGAEEQTQVAKAAFKRF 68
Query: 74 RTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWG 133
+T+RHPNILA+ ID T+ +++VTE V PL +K G ++ +WG
Sbjct: 69 KTLRHPNILAY--------IDGLETEKCLHVVTEAVTPLGIYLKARVEAGGLKELEISWG 120
Query: 134 LNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEA---ANGPM 190
L+QI KA+SFL NDC L+H NVC+++V V + +WKL D + GN P
Sbjct: 121 LHQIVKALSFLVNDCSLIHNNVCMAAVFVDRAGEWKLGGLDYMYSAQGNGGGPPRKGIPE 180
Query: 191 LQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTA 250
L+ QY P ELA S VR+ WS D W LGCLI+E+F+G L + LRN
Sbjct: 181 LE-------QYDPPELADSSGRVVREK--WSADMWRLGCLIWEVFNGP-LPRAAALRNPG 230
Query: 251 SIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE----YFQNKLVDTIHFMEILNLKDSVEK 306
IPK+L+P Y L+ + P R N ++ ++N + N+ V+T F+E + +K+ EK
Sbjct: 231 KIPKTLVPHYCELVGANPKVRPNPARFLQNCRAPGGFMSNRFVETNLFLEEIQIKEPAEK 290
Query: 307 DTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLSTEEFSVKV 366
FF++L + P K+LP L +A EFG+A A LT L K+G +LS EE+ K+
Sbjct: 291 QKFFQELSKSLDAFPEDFCRHKVLPQLLTAFEFGNAGAVVLTPLFKVGKFLSAEEYQQKI 350
Query: 367 LPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLK 426
+P +VK+F+S DRA+R+ LLQ ++Q+ Q V+ Q++PHV GF DT+ +RE T+K
Sbjct: 351 IPVVVKMFSSTDRAMRIRLLQQMEQFIQYLDEPTVNTQIFPHVVHGFLDTNPAIREQTVK 410
Query: 427 SMLVLAPKLSQRTISGSLLKYLSKLQV-DEEPAIRTNTTILLGNIASHLNEGTRKRVLIN 485
SML+LAPKL++ ++ L+K+ ++LQ DE+ IR NTT+ LG I S+L+ TR RVL +
Sbjct: 411 SMLLLAPKLNEANLNVELMKHFARLQAKDEQGPIRCNTTVCLGKIGSYLSASTRHRVLTS 470
Query: 486 AFTVRALRDTFSPAR------------------GAAKILSYLNC--------DVRSKAFQ 519
AF+ RA RD F+P+R A KIL L C VR +AF+
Sbjct: 471 AFS-RATRDPFAPSRVAGVLGFAATHNLYSMNDCAQKILPVL-CGLTVDPEKSVRDQAFK 528
Query: 520 AVDQFLQIVKQYHE 533
A+ FL ++ E
Sbjct: 529 AIRSFLSKLESVSE 542
|
Isoform 6 acts as transcriptional activator. It binds to three different types of GC-rich DNA binding sites (box-A, -B and -C) in the beta-polymerase promoter region. It also binds to the TERT promoter region. Homo sapiens (taxid: 9606) |
| >sp|A6QLH6|NTKL_BOVIN N-terminal kinase-like protein OS=Bos taurus GN=SCYL1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 362 bits (928), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 210/553 (37%), Positives = 304/553 (54%), Gaps = 54/553 (9%)
Query: 16 VKDLPYNIGDPYPSAWGS--WSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRL 73
V+D P+ + P W +G K GSPVSIF + A+ KRL
Sbjct: 9 VRDFPFELSPEPPEGSPPGPWVLHRGRKKATGSPVSIFVYDVKPVAEEQTQVAKAAFKRL 68
Query: 74 RTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWG 133
+T+RHPNILA+ ID T +++VTE V PL +K G ++ +WG
Sbjct: 69 KTLRHPNILAY--------IDGLETDKCLHVVTEAVTPLGVYLKARAEAGGLKELELSWG 120
Query: 134 LNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEA---ANGPM 190
L+QI KA+SFL NDC L+H NVC+++V V + +WKL D + GN P
Sbjct: 121 LHQIVKALSFLVNDCSLIHNNVCMAAVFVDRAGEWKLGGLDYMYSAQGNGGGPPRKGIPE 180
Query: 191 LQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTA 250
L+ QY P ELA AVR+ WS D W LGCLI+E+F+G L + LRN
Sbjct: 181 LE-------QYDPPELADGSGRAVREK--WSADMWRLGCLIWEVFNGP-LPRAAALRNPG 230
Query: 251 SIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE----YFQNKLVDTIHFMEILNLKDSVEK 306
IPKSL+P Y L+ + P R N ++ ++N + N+ V+T F+E + +K+ EK
Sbjct: 231 KIPKSLVPHYCELVGANPKVRPNPARFLQNCRAPGGFMNNRFVETNLFLEEIQIKEPAEK 290
Query: 307 DTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLSTEEFSVKV 366
FF++L + P K+LP L +A EFGSA A LT L K+G +L+ EE+ K+
Sbjct: 291 QKFFQELSKSLDSFPEDFCRHKVLPQLLTAFEFGSAGAVVLTPLFKVGKFLNAEEYQQKI 350
Query: 367 LPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLK 426
+P +VK+F+S DRA+R+ LLQ ++Q+ Q V+ Q++PHV GF DT+ +RE T+K
Sbjct: 351 IPVVVKMFSSTDRAMRIRLLQQMEQFIQYLDEPTVNTQIFPHVVHGFLDTNPAIREQTVK 410
Query: 427 SMLVLAPKLSQRTISGSLLKYLSKLQV-DEEPAIRTNTTILLGNIASHLNEGTRKRVLIN 485
SML+LAPKL++ ++ L+K+ ++LQ DE+ IR NTT+ LG I S+L+ TR RVL +
Sbjct: 411 SMLLLAPKLNETNLNVELMKHFARLQAKDEQGPIRCNTTVCLGKIGSYLSASTRHRVLTS 470
Query: 486 AFTVRALRDTFSPARGAA---------------------KILSYLNCD----VRSKAFQA 520
AF+ RA +D F+P+R A +L L D VR +AF+A
Sbjct: 471 AFS-RATKDPFAPSRVAGVLGFAATHNLYSMNDCAHKILPVLCGLTVDPEKSVRDQAFKA 529
Query: 521 VDQFLQIVKQYHE 533
+ FL ++ E
Sbjct: 530 IRSFLSKLESVSE 542
|
Regulates COPI-mediated retrograde traffic. Has no detectable kinase activity in vitro. Bos taurus (taxid: 9913) |
| >sp|Q561M0|NTKL_XENLA N-terminal kinase-like protein OS=Xenopus laevis GN=scyl1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 357 bits (917), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 220/614 (35%), Positives = 327/614 (53%), Gaps = 75/614 (12%)
Query: 17 KDLPYNIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV 76
+D PY++ G W +G K G PVS+F+ + AA+ KR++T+
Sbjct: 10 RDFPYDVTGEREELPGGWGIQKGKKKTGGDPVSVFTYEIRPGAEEQTQAAKTASKRIKTL 69
Query: 77 RHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQ 136
+HPNIL++ +D T +YIVTEPV PL +K G + +WGL+Q
Sbjct: 70 KHPNILSY--------VDGLETDKCLYIVTEPVTPLETYVKLRTDSGGVSELEISWGLHQ 121
Query: 137 IAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEA-ANGPMLQYAW 195
I KA+SFL ND L+H NVC+S+V V + +WKL D + N A G ++
Sbjct: 122 IVKALSFLVNDGNLIHNNVCMSAVFVDRAGEWKLGGLDYMYTAGAENTAPRKGVEME--- 178
Query: 196 LVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTASIPKS 255
+Y P E K+D + K WS D W LGCLI+E+F+G L + LR+ I KS
Sbjct: 179 ----KYNPPE--KTDRSKTSKEK-WSADMWCLGCLIWEVFNGP-LPRPTALRSLGKIAKS 230
Query: 256 LLPDYQRLLSSMPSRRLNSSKLIENSE----YFQNKLVDTIHFMEILNLKDSVEKDTFFR 311
L+P Y L+ + P R N S+ ++N +F N V+T F+E + +KD EK TFF
Sbjct: 231 LVPHYCELVGANPKIRPNPSRFLQNCRSPGGFFCNSFVETNLFLEEIQIKDPAEKQTFFE 290
Query: 312 KLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLSTEEFSVKVLPTIV 371
+L + P K+LP L +A EFGSA A L L K+G +L+ +E+ K++P +V
Sbjct: 291 QLSENLDSFPEDFCRHKILPQLLTAFEFGSAGAVVLPPLFKIGKFLNADEYQQKIIPVVV 350
Query: 372 KLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVL 431
K+F+S DRA+R+ LLQ ++ + Q + V+ Q++PHV GF DT+ +RE T+KSML+L
Sbjct: 351 KMFSSTDRAMRIRLLQQMENFIQYLNEPTVNAQIFPHVVHGFMDTNPAIREQTVKSMLLL 410
Query: 432 APKLSQRTISGSLLKYLSKLQV-DEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVR 490
APKL++ ++ L+K+ ++LQ D++ IR NTT+ LG IA +LN TR+RVLI+AF+ R
Sbjct: 411 APKLNENNLNMDLMKHFARLQARDDQGPIRCNTTVCLGKIAPYLNPATRQRVLISAFS-R 469
Query: 491 ALRDTFSPARGAA--------KILSYLNC-----------------DVRSKAFQAVDQFL 525
A +D F+P+R A S +C +VR +AF+ + FL
Sbjct: 470 ATKDPFAPSRAAGVLGFAATHNFYSMADCAGKVLPVLCGVTLDPEKNVREQAFKTIRSFL 529
Query: 526 QIVKQYHEKTNTGDATGASSVGISSMPGNAS---LLGWA------MSSLTLK-------- 568
+ +T +GD + + + +AS + GWA +SSLT K
Sbjct: 530 DKL-----ETVSGDPSQLAELEKDVHTASASPSVVGGWAGWAVTGVSSLTSKFIRTGGGA 584
Query: 569 --GKPSEQAPVASA 580
PSE AP A
Sbjct: 585 QDASPSEGAPAPPA 598
|
Xenopus laevis (taxid: 8355) |
| >sp|Q28FH2|NTKL_XENTR N-terminal kinase-like protein OS=Xenopus tropicalis GN=scyl1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 357 bits (916), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 231/682 (33%), Positives = 356/682 (52%), Gaps = 73/682 (10%)
Query: 17 KDLPYNIG---DPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRL 73
+D PY++ + P+ WG +G K G VS+F+ + AA+ +KR+
Sbjct: 10 RDFPYDVTGEREELPAGWGVQ---KGKKKTGGDAVSVFTYEIRPGAEEQTQAAKTALKRI 66
Query: 74 RTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWG 133
+T++HPNIL++ +D T +YIVTEPV PL +K G + +WG
Sbjct: 67 KTLKHPNILSY--------VDGLETDKCLYIVTEPVTPLGTYVKLRTDSGGVSELEISWG 118
Query: 134 LNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAA-NGPMLQ 192
L+QI KA+SFL ND L+H NVC+S+V V + +WKL D + + A G ++
Sbjct: 119 LHQIVKALSFLVNDGNLIHNNVCMSAVFVDRAGEWKLGGLDYMYTAGAEDTAPLKGIEME 178
Query: 193 YAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTASI 252
+Y P E K+D + K WS D W LGCLI+E+F+G L + LR+ I
Sbjct: 179 -------KYNPPE--KTDRSKTSKEK-WSADMWCLGCLIWEVFNGP-LPRPTALRSLGKI 227
Query: 253 PKSLLPDYQRLLSSMPSRRLNSSKLIENSE----YFQNKLVDTIHFMEILNLKDSVEKDT 308
PKSL+P Y L+ + P R N ++ ++N +F N V+T F+E + +KD EK T
Sbjct: 228 PKSLVPHYCELVGANPKVRPNPARFLQNCRSPGGFFCNSFVETNLFLEEIQIKDPAEKQT 287
Query: 309 FFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLSTEEFSVKVLP 368
FF +L + P K+LP L +A EFGSA A L L K+G +L+ +E+ K++P
Sbjct: 288 FFEQLSENLDSFPEDFCRHKILPQLLTAFEFGSAGAVVLPPLFKIGKFLNADEYQQKIIP 347
Query: 369 TIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSM 428
+VK+F+S DRA+R+ LLQ ++ + Q + V+ Q++PHV GF DT+ +RE T+KSM
Sbjct: 348 VVVKMFSSTDRAMRIRLLQQMENFIQYLNEPTVNAQIFPHVVHGFMDTNPAIREQTVKSM 407
Query: 429 LVLAPKLSQRTISGSLLKYLSKLQV-DEEPAIRTNTTILLGNIASHLNEGTRKRVLINAF 487
L+LAPKL++ ++ L+K+ ++LQ D++ IR NTT+ LG IA +LN TR+RVLI+AF
Sbjct: 408 LLLAPKLNENNLNMELMKHFARLQARDDQGPIRCNTTVCLGKIAPYLNPATRQRVLISAF 467
Query: 488 TVRALRDTFSPARGAA--------KILSYLNC-----------------DVRSKAFQAVD 522
+ RA +D FSP+R A S +C +VR +AF+A+
Sbjct: 468 S-RATKDPFSPSRAAGVLGFAATHNFYSLTDCAGKVLPVLCGVTVDPEKNVREQAFKAIR 526
Query: 523 QFLQIVKQYHEK----TNTGDATGASSVGISSMPGNASLLGWA---MSSLT---LKGKPS 572
FL ++ E +SV S + G A GWA +SSLT ++
Sbjct: 527 SFLDKLETVSEDPSQLAELEKDVHTASVSPSVVGGWA---GWAVTGVSSLTSKFIRTGGG 583
Query: 573 EQAPVASANSITPLTSTTSSTSSVMENAINAPLRHVSSGTDFADQPAGPAPPSPT---ST 629
Q AS + P T++ +S ++ P ++ T + + AP +
Sbjct: 584 AQDAAASEGASAPSTASEASKPDTAPSSSAPPAAASTAPTSYEPEEEKGAPDNSLDRWDD 643
Query: 630 DGWGEIENGLHEDHDSDKDGWD 651
+ WG +E+ ++ D WD
Sbjct: 644 EDWGSLEDAEQNRGQTENDDWD 665
|
Xenopus tropicalis (taxid: 8364) |
| >sp|Q5M9F8|NTKL_RAT N-terminal kinase-like protein OS=Rattus norvegicus GN=Scyl1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 356 bits (913), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 214/554 (38%), Positives = 306/554 (55%), Gaps = 56/554 (10%)
Query: 16 VKDLPY--NIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRL 73
V+D P+ N P G W +G K GS VSIF + A+ KRL
Sbjct: 9 VRDFPFELNPEPPEGGPPGPWVLHRGRKKATGSAVSIFVYDVKPGAEEQTQVAKAAFKRL 68
Query: 74 RTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWG 133
+T+RHPNILA+ ID T+ ++IVTE V PL +K G +++ +WG
Sbjct: 69 KTLRHPNILAY--------IDGLETEKCLHIVTEAVTPLGTYLKARAEAGGLKEQELSWG 120
Query: 134 LNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANG---PM 190
L+QI KA+SFL NDC L+H NVC+++V V + +WKL D + GN P
Sbjct: 121 LHQIVKALSFLVNDCNLIHNNVCMAAVFVDKAGEWKLGGLDYMYSAQGNGGGPPNKGIPE 180
Query: 191 LQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTA 250
L+ QY P ELA S AV++ WS D W LGCLI+E+F+G L + LRN
Sbjct: 181 LE-------QYDPPELADSSSRAVKEK--WSADMWRLGCLIWEVFNG-SLPRATALRNPG 230
Query: 251 SIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE----YFQNKLVDTIHFMEILNLKDSVEK 306
IPKSL+ Y L+ + P R N ++ ++N + N+ V+T F+E + +K+ EK
Sbjct: 231 KIPKSLVTHYCELVGANPKVRPNPARFLQNCRAPGGFMSNRFVETNLFLEEIQIKEPAEK 290
Query: 307 DTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLSTEEFSVKV 366
FF++L + P K+LP L +A EFG+A A LT L K+G +LS EE+ K+
Sbjct: 291 QKFFQELSKSLDSFPEDFCRHKVLPQLLTAFEFGNAGAVVLTPLFKVGKFLSAEEYQQKI 350
Query: 367 LPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLK 426
+P +VK+F+S DRA+RV LLQ ++Q+ Q V+ Q++PHV GF DT+ +RE T+K
Sbjct: 351 IPVVVKMFSSTDRAMRVRLLQQMEQFIQYLDEPTVNTQIFPHVTHGFLDTNPAIREQTVK 410
Query: 427 SMLVLAPKLSQRTISGSLLKYLSKLQV-DEEPAIRTNTTILLGNIASHLNEGTRKRVLIN 485
SML+LAPKLS+ ++ LLK+ ++LQ D++ IR NTT+ LG I S+L+ TR RVL +
Sbjct: 411 SMLLLAPKLSETNLNVELLKHFARLQAKDDQGPIRCNTTVCLGKIGSYLSASTRHRVLTS 470
Query: 486 AFTVRALRDTFSPAR------------------GAAKILSYLNC--------DVRSKAFQ 519
AF+ RA +D F+P+R A KIL L C VR +AF+
Sbjct: 471 AFS-RATKDPFAPSRVAGVLGFAATHNLYSMDDCAHKILPVL-CGLTVDPEKSVRDQAFK 528
Query: 520 AVDQFLQIVKQYHE 533
+ FL ++ E
Sbjct: 529 TIRSFLSKLESVSE 542
|
Regulates COPI-mediated retrograde traffic. Has no detectable kinase activity in vitro. Rattus norvegicus (taxid: 10116) |
| >sp|Q9EQC5|NTKL_MOUSE N-terminal kinase-like protein OS=Mus musculus GN=Scyl1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 355 bits (911), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 207/553 (37%), Positives = 303/553 (54%), Gaps = 54/553 (9%)
Query: 16 VKDLPYNIGDPYPSAWGS--WSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRL 73
V+D P+ + P W +G K GS VSIF + A+ KRL
Sbjct: 9 VRDFPFELSPEPPEGGPPGPWILHRGRKKATGSAVSIFVYDVKPGAEEQTQVAKAAFKRL 68
Query: 74 RTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWG 133
+T+RHPNILA+ ID T+ ++IVTE V PL +K G +++ +WG
Sbjct: 69 KTLRHPNILAY--------IDGLETEKCLHIVTEAVTPLGTYLKARAEAGGLKEQELSWG 120
Query: 134 LNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNN---EAANGPM 190
L+QI KA+SFL NDC L+H NVC+++V V + +WKL D + GN + P
Sbjct: 121 LHQIVKALSFLVNDCNLIHNNVCMAAVFVDRAGEWKLGGLDYMYSAQGNGGGPPSKGIPE 180
Query: 191 LQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTA 250
L+ QY P ELA S AVR+ WS D W LGCLI+E+F+G L + LRN
Sbjct: 181 LE-------QYDPPELADSSSRAVREK--WSADMWRLGCLIWEVFNG-SLPRAAALRNPG 230
Query: 251 SIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE----YFQNKLVDTIHFMEILNLKDSVEK 306
IPKSL+ Y L+ + P R N ++ ++N + N+ V+T F+E + +K+ EK
Sbjct: 231 KIPKSLVTHYCELVGANPKVRPNPARFLQNCRAPGGFMSNRFVETNLFLEEIQIKEPAEK 290
Query: 307 DTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLSTEEFSVKV 366
FF++L + P K+LP L +A EFG+A A LT L K+G L EE+ K+
Sbjct: 291 QKFFQELSKSLDSFPEDFCRHKVLPQLLTAFEFGNAGAVVLTPLFKVGKSLRAEEYQEKI 350
Query: 367 LPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLK 426
+P +VK+F+S DRA+R+ LLQ ++Q+ Q V+ Q++PHV GF DT+ +RE T+K
Sbjct: 351 IPVVVKMFSSTDRAMRIRLLQQMEQFIQYLDEPTVNTQIFPHVTHGFLDTNPAIREQTVK 410
Query: 427 SMLVLAPKLSQRTISGSLLKYLSKLQV-DEEPAIRTNTTILLGNIASHLNEGTRKRVLIN 485
SML+LAPKL++ ++ L+K+ ++LQ D++ IR NTT+ LG I S+L+ TR RVL +
Sbjct: 411 SMLLLAPKLNEANLNVELMKHFARLQAKDDQGPIRCNTTVCLGKIGSYLSASTRHRVLTS 470
Query: 486 AFTVRALRDTFSPARGAA---------------------KILSYLNCD----VRSKAFQA 520
AF+ RA +D F+P+R A +L L D VR +AF+
Sbjct: 471 AFS-RATKDPFAPSRVAGVLGFAATHNLYSMDDCAHKILPVLCGLTVDPEKSVRDQAFKT 529
Query: 521 VDQFLQIVKQYHE 533
+ FL ++ E
Sbjct: 530 IRSFLSKLESVSE 542
|
Regulates COPI-mediated retrograde traffic. Has no detectable kinase activity in vitro. Mus musculus (taxid: 10090) |
| >sp|O13733|PPK3_SCHPO Protein kinase domain-containing protein ppk3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ppk3 PE=4 SV=1 | Back alignment and function description |
|---|
Score = 143 bits (361), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 147/572 (25%), Positives = 264/572 (46%), Gaps = 71/572 (12%)
Query: 4 FLKGVVGGSGAGVKDLPYNIGDPYPSAWGS-WSHFQGTSKDDGSPVSIFSISGTNAQDGH 62
F+K PY++ + P + S W+ G+ ++ P S+FSIS + +
Sbjct: 3 FIKSAASFIAKAGSQFPYDLNEKIPLSSNSVWTLQTGSIRESAQPCSVFSISLSTHPEWA 62
Query: 63 LAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLE 122
A R + ++T+RHP I+ +L + + +ST + YI TE V P++ ++ EL
Sbjct: 63 ELADR-ACETMKTLRHPCIIKYLSTYK------SSTHL--YIATETVRPVTTELNELS-- 111
Query: 123 GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGN 182
E +GL +++ A+SFLN D +VHGN+ +SSV + +W + F + +
Sbjct: 112 ----AEIKTYGLWRVSAALSFLN-DKNIVHGNLQMSSVYLNSADEWIIGDFFLAGDSPQF 166
Query: 183 NEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSK 242
+ + +L ++ LV P E+ S + + +DS+ LG I L++G
Sbjct: 167 IKDNHDKILNWSRLV-----PFEIQSS---TLNSASFIYLDSYELGKFISHLYNGT---- 214
Query: 243 TEELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE----YFQNKLVDTIHFMEIL 298
+L +IP ++ ++LL+ ++L +S+ ++ E +F+ L+ + +
Sbjct: 215 PGDLSQRGNIPANIFVSAKKLLNVEGKQKLLASEFLKLGERPGGFFRTHLITLYELLSEV 274
Query: 299 NLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLS 358
+ + ++ + L + E +P+ + K +L +L L + + + L K +
Sbjct: 275 RINEEEDRVKLKQLLSSKLEVIPKNYIQKVVLNILFLLLSIDTHS-DVVELLFKCAQIVK 333
Query: 359 -----TEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGF 413
++F V +L L IR LL I + ++ + A
Sbjct: 334 GRPDIEKDFGVPLL----SLLKQQSVPIRGLLLSGIINNPDVLPKNIYEDTSFSVFANLV 389
Query: 414 ADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASH 473
S L+E + ++APKLS++T++ LL+ L+ +Q D+ P +RTN+TI LG IA +
Sbjct: 390 RSNSPTLKEHAIVVFSIIAPKLSKKTLNNELLRSLAVVQNDQHPTLRTNSTICLGKIAEY 449
Query: 474 LNEGTRKRVLINAFTVRALRDTFSPARGAA-KIL----SYLNC-DVRSKAFQAV------ 521
L+ RK VL A + R+L+D F PAR AA K+L +Y + DV K F +V
Sbjct: 450 LDASVRKPVLAAALS-RSLKDPFVPAREAALKVLLSVQNYFDTKDVAIKLFPSVVPLLID 508
Query: 522 -------------DQFLQIVKQYH--EKTNTG 538
DQFL +K ++ EK N
Sbjct: 509 ENEGIRRTAEDVTDQFLSRIKNFNLGEKENVS 540
|
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) |
| >sp|Q9DBQ7|PACE1_MOUSE Protein-associating with the carboxyl-terminal domain of ezrin OS=Mus musculus GN=Scyl3 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 136 bits (343), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 120/418 (28%), Positives = 198/418 (47%), Gaps = 55/418 (13%)
Query: 44 DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIY 103
DG S+F N + AA K L+T+RHP +L FL T ++A I+
Sbjct: 33 DGKCASVFVYKRENEDKVNKAA-----KHLKTLRHPCLLRFLSCT----VEADG----IH 79
Query: 104 IVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT 163
+VTE V PL E+ LE E A G+ I A+ FL++ L H NVCLSSV V+
Sbjct: 80 LVTERVQPL-----EVALETLSPAEVCA-GIYDILLALIFLHDRGHLTHNNVCLSSVFVS 133
Query: 164 QTLDWKLHAFDVLS-------EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRK 216
+ WKL + + EF N ++ P A P E++ +++ + +
Sbjct: 134 EDGHWKLGGMETVCQVPQATPEFLRNIQSVRDP---------ASIPPEEMSP-EFSGLPE 183
Query: 217 SPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTASIPKSLLPD-YQRLLSSMPSRRLNSS 275
S + D++ G L+ L E++ +A + S L + LL+ MP R S
Sbjct: 184 SHGHARDAYAFGALVDSLLPIF----NEQV--SADVLSSFLQILHSALLNPMPECRPALS 237
Query: 276 KLIENSEYFQNKLVDTIHFMEILNLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLAS 335
L+ + ++F+N ++ ++F++ L LK EK FF+ L + L +++ +L+PLL +
Sbjct: 238 TLLSH-DFFRNDFLEVVNFLKSLTLKSEDEKTEFFKFLLDRVSCLSEELIASRLVPLLLN 296
Query: 336 ALEFGSAAA-----PALTALLKMGS------WLSTEEFSVKVLPTIVKLFASNDRAIRVA 384
L F A P L K + LS F +V+P +++LF ++ +R+
Sbjct: 297 QLVFAEPVAVKSFLPYLLGPKKENAPGETPCLLSPALFQSRVIPVLLRLFEVHEEHVRMV 356
Query: 385 LLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISG 442
LL HI+ Y + F+ + + + + P V G DTS + +TL+S+ VL L + G
Sbjct: 357 LLSHIEAYVEHFTQEQLKKVILPQVLLGLRDTSNSIVAITLRSLAVLVSLLGPEVVVG 414
|
May play a role in regulating cell adhesion/migration complexes in migrating cells. Mus musculus (taxid: 10090) |
| >sp|Q8IZE3|PACE1_HUMAN Protein-associating with the carboxyl-terminal domain of ezrin OS=Homo sapiens GN=SCYL3 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 136/511 (26%), Positives = 235/511 (45%), Gaps = 68/511 (13%)
Query: 44 DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIY 103
DG S+F N + AA K L+T+RHP +L FL T ++A I+
Sbjct: 33 DGKFASVFVYKRENEDKVNKAA-----KHLKTLRHPCLLRFLSCT----VEADG----IH 79
Query: 104 IVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT 163
+VTE V PL E+ LE E A G+ I A+ FL++ L H NVCLSSV V+
Sbjct: 80 LVTERVQPL-----EVALETLSSAEVCA-GIYDILLALIFLHDRGHLTHNNVCLSSVFVS 133
Query: 164 QTLDWKLHAFDVLS-------EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRK 216
+ WKL + + EF + ++ P A P E++ ++T + +
Sbjct: 134 EDGHWKLGGMETVCKVSQATPEFLRSIQSIRDP---------ASIPPEEMS-PEFTTLPE 183
Query: 217 SPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTASIPKSLLPDYQRLLSSMPSRRLNSSK 276
+ D++ G L+ L + + + ++ +S ++L + LL+ +P R
Sbjct: 184 CHGHARDAFSFGTLVESLLTILNEQVSADV--LSSFQQTL---HSTLLNPIPKCRPALCT 238
Query: 277 LIENSEYFQNKLVDTIHFMEILNLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASA 336
L+ + ++F+N ++ ++F++ L LK EK FF+ L + L +++ +L+PLL +
Sbjct: 239 LLSH-DFFRNDFLEVVNFLKSLTLKSEEEKTEFFKFLLDRVSCLSEELIASRLVPLLLNQ 297
Query: 337 LEFGS--AAAPALTALL---------KMGSWLSTEEFSVKVLPTIVKLFASNDRAIRVAL 385
L F A L LL + LS F +V+P +++LF ++ +R+ L
Sbjct: 298 LVFAEPVAVKSFLPYLLGPKKDHAQGETPCLLSPALFQSRVIPVLLQLFEVHEEHVRMVL 357
Query: 386 LQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLL 445
L HI+ Y + F+ + + + + P V G DTS + +TL S+ VL L + G
Sbjct: 358 LSHIEAYVEHFTQEQLKKVILPQVLLGLRDTSDSIVAITLHSLAVLVSLLGPEVVVGG-- 415
Query: 446 KYLSKLQVDEEPAIRTNTTILLGN-----IASHLNEGTRKRVLINAFTVRALRDTFSPAR 500
+K+ P+ NT + L + + SH ++ + +L N F+ + FS
Sbjct: 416 -ERTKIFKRTAPSFTKNTDLSLEDSPMCVVCSHHSQIS--PILENPFSSIFPKCFFS--- 469
Query: 501 GAAKILS--YLNCDVRSKAFQAVDQFLQIVK 529
G+ I S ++ D + Q D F Q +K
Sbjct: 470 GSTPINSKKHIQRDYYNTLLQTGDPFSQPIK 500
|
May play a role in regulating cell adhesion/migration complexes in migrating cells. Homo sapiens (taxid: 9606) |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 771 | ||||||
| 225448715 | 794 | PREDICTED: probable inactive serine/thre | 0.992 | 0.963 | 0.825 | 0.0 | |
| 224124488 | 800 | predicted protein [Populus trichocarpa] | 0.992 | 0.956 | 0.812 | 0.0 | |
| 225448717 | 808 | PREDICTED: probable inactive serine/thre | 0.981 | 0.936 | 0.797 | 0.0 | |
| 356576646 | 793 | PREDICTED: probable inactive serine/thre | 0.987 | 0.959 | 0.779 | 0.0 | |
| 224146234 | 794 | predicted protein [Populus trichocarpa] | 0.983 | 0.954 | 0.795 | 0.0 | |
| 449453348 | 796 | PREDICTED: probable inactive serine/thre | 0.993 | 0.962 | 0.780 | 0.0 | |
| 359486325 | 788 | PREDICTED: probable inactive serine/thre | 0.984 | 0.963 | 0.796 | 0.0 | |
| 356568471 | 793 | PREDICTED: LOW QUALITY PROTEIN: probable | 0.988 | 0.960 | 0.779 | 0.0 | |
| 356531920 | 794 | PREDICTED: LOW QUALITY PROTEIN: probable | 0.989 | 0.960 | 0.775 | 0.0 | |
| 255559707 | 792 | ATP binding protein, putative [Ricinus c | 0.987 | 0.960 | 0.789 | 0.0 |
| >gi|225448715|ref|XP_002280870.1| PREDICTED: probable inactive serine/threonine-protein kinase scy1 isoform 1 [Vitis vinifera] gi|297736476|emb|CBI25347.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1269 bits (3283), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 657/796 (82%), Positives = 711/796 (89%), Gaps = 31/796 (3%)
Query: 1 MFKFLKGVVGGSGAGVKDLPYNIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQD 60
M KFLKGVV GSGAG+KDLPYNIG+PY SAWGSW+H +GTSKDDGSPVSIFS+SG+NAQD
Sbjct: 1 MLKFLKGVVAGSGAGLKDLPYNIGEPYSSAWGSWTHSRGTSKDDGSPVSIFSLSGSNAQD 60
Query: 61 GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELG 120
GHLAA RNGVKRLRTVRHPNIL+FLHSTE E D +STK+TIYIVTEPVMPLSEKIKELG
Sbjct: 61 GHLAAGRNGVKRLRTVRHPNILSFLHSTEAETFDGSSTKVTIYIVTEPVMPLSEKIKELG 120
Query: 121 LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180
LEG+QRDEYYAWGL+QIAKAVSFLNNDCKLVHGNVCL+SVVVTQTLDWKLHAFDVLSEFD
Sbjct: 121 LEGTQRDEYYAWGLHQIAKAVSFLNNDCKLVHGNVCLASVVVTQTLDWKLHAFDVLSEFD 180
Query: 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL 240
G++EAA GP+LQY WLVG+QYKP+EL KSDW A+RKSPPW+IDSWGLGCLIYELFSGMRL
Sbjct: 181 GHSEAATGPLLQYEWLVGSQYKPMELLKSDWAAIRKSPPWAIDSWGLGCLIYELFSGMRL 240
Query: 241 SKTEELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKLVDTIHFMEILNL 300
KTEELRNTASIPKSLLPDYQRLLSSMP+RRLN+SKLIENSEYFQNKLVDTIHFM+ILNL
Sbjct: 241 GKTEELRNTASIPKSLLPDYQRLLSSMPARRLNTSKLIENSEYFQNKLVDTIHFMDILNL 300
Query: 301 KDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLSTE 360
KDSVEKDTFFRKLPNLAEQLPRQIVLKKLLP+LASALEFGSAAAPALTALLKM SWLS E
Sbjct: 301 KDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPMLASALEFGSAAAPALTALLKMASWLSAE 360
Query: 361 EFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFL 420
+FS KVLPTIVKLFASNDRAIRV LLQHIDQYG+S SAQ+VDEQVY HVATGF+DTSAFL
Sbjct: 361 DFSAKVLPTIVKLFASNDRAIRVGLLQHIDQYGESLSAQIVDEQVYTHVATGFSDTSAFL 420
Query: 421 REMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRK 480
RE+TLKSML+LAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIAS+LNEGTRK
Sbjct: 421 RELTLKSMLILAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASYLNEGTRK 480
Query: 481 RVLINAFTVRALRDTFSPARGAA------------------KILSYL-------NCDVRS 515
RVLINAFTVRALRDTFSPARGA +IL + + DVRS
Sbjct: 481 RVLINAFTVRALRDTFSPARGAGVMALCATSSYYDITEIATRILPNVVVLTIDPDSDVRS 540
Query: 516 KAFQAVDQFLQIVKQYHEKTNTGDATGASSVGISSMPGNASLLGWAMSSLTLKGKPSEQA 575
KAFQAVDQFLQIVKQYHEKTN GD TG SS+GISS+PGNASLLGWAMSSLTLK KPSEQA
Sbjct: 541 KAFQAVDQFLQIVKQYHEKTNAGDTTG-SSMGISSIPGNASLLGWAMSSLTLKSKPSEQA 599
Query: 576 PVASANSITPLTSTTSSTSSVMENAINAPLRHVSSGTDFADQPAGPAPPSPTSTDGWGEI 635
P+A ANS PL S +S+ SSVM+ A A + +VSS TDF+DQ P SPTSTDGWGE+
Sbjct: 600 PLAPANSSAPLASASSNDSSVMDTATPASI-NVSSPTDFSDQ---AVPASPTSTDGWGEL 655
Query: 636 ENGLHEDHDSDKDGWDDIEPLEEPKPSPVLANIQAAQKRPVSQPRPTATSLRPKSTGKVP 695
ENG+HE+H+SDKDGWDDIEPLEEPKP LANIQAAQKRPVSQP+P S RPK KV
Sbjct: 656 ENGIHEEHESDKDGWDDIEPLEEPKPPSALANIQAAQKRPVSQPKPQVPS-RPKIPPKVS 714
Query: 696 KEEDDDLWGSIAAPAPRTSSKPLNVKPAAALDDDDPWAAIAAPPPTTKAKPLAAGRGRGA 755
K+EDDDLWGSIAAPAP+T+SKPLNVK A A+D+DDPWAAIAAPPPTT+AKPL+AGRGRGA
Sbjct: 715 KDEDDDLWGSIAAPAPKTASKPLNVKTAGAVDNDDPWAAIAAPPPTTRAKPLSAGRGRGA 774
Query: 756 KPVAPKLGAQRINRTS 771
KP APKLGAQRINRTS
Sbjct: 775 KPAAPKLGAQRINRTS 790
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224124488|ref|XP_002319344.1| predicted protein [Populus trichocarpa] gi|222857720|gb|EEE95267.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1268 bits (3280), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 652/802 (81%), Positives = 711/802 (88%), Gaps = 37/802 (4%)
Query: 1 MFKFLKGVVGGSGAGVKDLPYNIGDPYPSAWGSWSHFQGTSKDD--GSPVSIFSISGTNA 58
M +FLKGVVGGSG G+KDLPYNIGDPYPSAWGSW+H +GTSKDD GS VSIFS+SG+NA
Sbjct: 1 MLRFLKGVVGGSGTGLKDLPYNIGDPYPSAWGSWTHHRGTSKDDDGGSAVSIFSLSGSNA 60
Query: 59 QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKE 118
DGHLAA RNGVKRLRTVRHPNIL+FLHSTEVE+++ +S+++TIYIVTEPVMPLSEKIKE
Sbjct: 61 LDGHLAAGRNGVKRLRTVRHPNILSFLHSTEVESVEGSSSRVTIYIVTEPVMPLSEKIKE 120
Query: 119 LGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178
LGLEG+QRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCL+SVVVT TLDWKLHAFDVLSE
Sbjct: 121 LGLEGAQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLASVVVTPTLDWKLHAFDVLSE 180
Query: 179 FDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM 238
FDG+N A GPMLQY WL+G+QYKP+ELAKSDW A+RKSPPW+IDSWGLGCLIYELFSGM
Sbjct: 181 FDGSNGNATGPMLQYEWLIGSQYKPMELAKSDWVAIRKSPPWAIDSWGLGCLIYELFSGM 240
Query: 239 RLSKTEELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKLVDTIHFMEIL 298
+L KTEELRNT+SIPKSLL DYQRLLSSMPSRR+N++KL+ENSEYFQNKLVDTIHFMEIL
Sbjct: 241 KLGKTEELRNTSSIPKSLLQDYQRLLSSMPSRRMNTAKLLENSEYFQNKLVDTIHFMEIL 300
Query: 299 NLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLS 358
LKDSVEKDTFFRKLPNLAEQLPR IVLKKLLPLLASALEFGSAAAPALTALLKMGSWLS
Sbjct: 301 TLKDSVEKDTFFRKLPNLAEQLPRPIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLS 360
Query: 359 TEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSA 418
+EEFSVKVLPTIVKLF+SNDRA+RV+LLQHIDQYG+S SAQVVDEQV+PHVATGF+DTSA
Sbjct: 361 SEEFSVKVLPTIVKLFSSNDRAVRVSLLQHIDQYGESLSAQVVDEQVFPHVATGFSDTSA 420
Query: 419 FLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGT 478
FLRE+TLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIAS+LNEGT
Sbjct: 421 FLRELTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASYLNEGT 480
Query: 479 RKRVLINAFTVRALRDTFSPARGAA------------------KILSYL-------NCDV 513
RKRVLINAFTVRALRDTFSPARGA +IL + + DV
Sbjct: 481 RKRVLINAFTVRALRDTFSPARGAGVMALCATSSYYDINEIATRILPNVVVLTIDPDSDV 540
Query: 514 RSKAFQAVDQFLQIVKQYHEKTNTGDATGASSVGISSMPGNASLLGWAMSSLTLKGKPSE 573
RSK+FQA +QFLQIVKQYHE TN GDA GA+S GISS+PGNASLLGWAMSSLT KGKPSE
Sbjct: 541 RSKSFQAAEQFLQIVKQYHE-TNVGDAAGAASTGISSIPGNASLLGWAMSSLTSKGKPSE 599
Query: 574 QAPVASANSITPLTSTTSSTSSVMENAINAPLRHVSSGTDFADQPAGPAPPSPTSTDGWG 633
QAP+A ANS PL+STTS+ SSVM++ AP R SSG D ADQ P P SPTSTDGWG
Sbjct: 600 QAPLAPANSGVPLSSTTSNASSVMDSPSIAPARVNSSG-DLADQ---PVPESPTSTDGWG 655
Query: 634 EIENGLHEDHDSDKDGWDDIEPLEEPKPSPVLANIQAAQKRPVSQP----RPTATSLRPK 689
EIENG+HE+ S KDGWDDIEPLEEPKPSP LA+IQAAQKRPVSQP + A S+RPK
Sbjct: 656 EIENGIHEEQGSVKDGWDDIEPLEEPKPSPALASIQAAQKRPVSQPVSQQKAQAASVRPK 715
Query: 690 STGKVPKEEDDDLWGSIAAPAPRTSSKPLNVKPAAALDDDDPWAAIAAPPPTTKAKPLAA 749
STG+ K+EDDDLWGSIAAPAP+T+ KPLNVK A ALDDDDPWAAIAAPPPTT+AKPL A
Sbjct: 716 STGRATKDEDDDLWGSIAAPAPKTNKKPLNVKSATALDDDDPWAAIAAPPPTTRAKPLVA 775
Query: 750 GRGRGAKPVAPKLGAQRINRTS 771
GRGRG KP APKLGAQRINRTS
Sbjct: 776 GRGRG-KPAAPKLGAQRINRTS 796
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225448717|ref|XP_002280879.1| PREDICTED: probable inactive serine/threonine-protein kinase scy1 isoform 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1250 bits (3234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 652/818 (79%), Positives = 706/818 (86%), Gaps = 61/818 (7%)
Query: 1 MFKFLKGVVGGSGAGVKDLPYNIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQD 60
M KFLKGVV GSGAG+KDLPYNIG+PY SAWGSW+H +GTSKDDGSPVSIFS+SG+NAQD
Sbjct: 1 MLKFLKGVVAGSGAGLKDLPYNIGEPYSSAWGSWTHSRGTSKDDGSPVSIFSLSGSNAQD 60
Query: 61 GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELG 120
GHLAA RNGVKRLRTVRHPNIL+FLHSTE E D +STK+TIYIVTEPVMPLSEKIKELG
Sbjct: 61 GHLAAGRNGVKRLRTVRHPNILSFLHSTEAETFDGSSTKVTIYIVTEPVMPLSEKIKELG 120
Query: 121 LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180
LEG+QRDEYYAWGL+QIAKAVSFLNNDCKLVHGNVCL+SVVVTQTLDWKLHAFDVLSEFD
Sbjct: 121 LEGTQRDEYYAWGLHQIAKAVSFLNNDCKLVHGNVCLASVVVTQTLDWKLHAFDVLSEFD 180
Query: 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL 240
G++EAA GP+LQY WLVG+QYKP+EL KSDW A+RKSPPW+IDSWGLGCLIYELFSGMRL
Sbjct: 181 GHSEAATGPLLQYEWLVGSQYKPMELLKSDWAAIRKSPPWAIDSWGLGCLIYELFSGMRL 240
Query: 241 SKTEELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKLVDTIHFMEILNL 300
KTEELRNTASIPKSLLPDYQRLLSSMP+RRLN+SKLIENSEYFQNKLVDTIHFM+ILNL
Sbjct: 241 GKTEELRNTASIPKSLLPDYQRLLSSMPARRLNTSKLIENSEYFQNKLVDTIHFMDILNL 300
Query: 301 KDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLSTE 360
KDSVEKDTFFRKLPNLAEQLPRQIVLKKLLP+LASALEFGSAAAPALTALLKM SWLS E
Sbjct: 301 KDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPMLASALEFGSAAAPALTALLKMASWLSAE 360
Query: 361 EFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFL 420
+FS KVLPTIVKLFASNDRAIRV LLQHIDQYG+S SAQ+VDEQVY HVATGF+DTSAFL
Sbjct: 361 DFSAKVLPTIVKLFASNDRAIRVGLLQHIDQYGESLSAQIVDEQVYTHVATGFSDTSAFL 420
Query: 421 REMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRK 480
RE+TLKSML+LAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIAS+LNEGTRK
Sbjct: 421 RELTLKSMLILAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASYLNEGTRK 480
Query: 481 RVLINAFTVRALRDTFSPARGAA------------------KILSYL-------NCDVRS 515
RVLINAFTVRALRDTFSPARGA +IL + + DVRS
Sbjct: 481 RVLINAFTVRALRDTFSPARGAGVMALCATSSYYDITEIATRILPNVVVLTIDPDSDVRS 540
Query: 516 KAFQAVDQFLQIVKQYHEKTNTGDATGASSVGISSMPGNASLLGWAMSSLTLKGKPSEQA 575
KAFQAVDQFLQIVKQYHEKTN GD TG SS+GISS+PGNASLLGWAMSSLTLK KPSEQA
Sbjct: 541 KAFQAVDQFLQIVKQYHEKTNAGDTTG-SSMGISSIPGNASLLGWAMSSLTLKSKPSEQA 599
Query: 576 PVASANSITPLTSTTSSTSSVMENAINAPLRHVSSGTDFADQPAGPAPPSPTSTDGWGEI 635
P+A ANS PL S +S+ +S+ +VSS TDF+DQ P SPTSTDGWGE+
Sbjct: 600 PLAPANSSAPLASASSNDTSI----------NVSSPTDFSDQ---AVPASPTSTDGWGEL 646
Query: 636 ENGLHEDHDSDKDGWDDIEPLEEPKPSPVLANIQAAQKRPVSQPRP-------------- 681
ENG+HE+H+SDKDGWDDIEPLEEPKP LANIQAAQKRPVSQP+P
Sbjct: 647 ENGIHEEHESDKDGWDDIEPLEEPKPPSALANIQAAQKRPVSQPKPQGNIISLASSCFPV 706
Query: 682 --------TATSLRPKSTGKVPKEEDDDLWGSIAAPAPRTSSKPLNVKPAAALDDDDPWA 733
A RPK KV K+EDDDLWGSIAAPAP+T+SKPLNVK A A+D+DDPWA
Sbjct: 707 AYLMGDFLCAVPSRPKIPPKVSKDEDDDLWGSIAAPAPKTASKPLNVKTAGAVDNDDPWA 766
Query: 734 AIAAPPPTTKAKPLAAGRGRGAKPVAPKLGAQRINRTS 771
AIAAPPPTT+AKPL+AGRGRGAKP APKLGAQRINRTS
Sbjct: 767 AIAAPPPTTRAKPLSAGRGRGAKPAAPKLGAQRINRTS 804
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356576646|ref|XP_003556441.1| PREDICTED: probable inactive serine/threonine-protein kinase scy1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1244 bits (3219), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/799 (77%), Positives = 695/799 (86%), Gaps = 38/799 (4%)
Query: 1 MFKFLKGVVGGSGAGVKDLPYNIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQD 60
MFKFLK VV GSG G+KDLPYNIG+PY SAWGSW HF+GTSKDDGSPVSIFS+SG+N+QD
Sbjct: 1 MFKFLKEVVSGSGTGLKDLPYNIGEPYASAWGSWLHFRGTSKDDGSPVSIFSLSGSNSQD 60
Query: 61 GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELG 120
GHLAA RNGVKRLRTVRHPNIL+FLHSTE+E +DA S K+TIY+VTEPVMPLS+KIKELG
Sbjct: 61 GHLAAGRNGVKRLRTVRHPNILSFLHSTEIETVDAGSPKVTIYMVTEPVMPLSDKIKELG 120
Query: 121 LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180
LEG+QRDEYYAWGL+QIAKAVSFLNNDCKLVHGNVCL+SVVVTQTLDWKLHAFDVLSEF+
Sbjct: 121 LEGTQRDEYYAWGLHQIAKAVSFLNNDCKLVHGNVCLASVVVTQTLDWKLHAFDVLSEFE 180
Query: 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL 240
G+NEA++G MLQYAWLVG+QYKP+ELAKSDW A++KSPPW+IDSWG+G LIYELFSGM+L
Sbjct: 181 GSNEASSGQMLQYAWLVGSQYKPMELAKSDWAAIKKSPPWAIDSWGMGSLIYELFSGMKL 240
Query: 241 SKTEELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKLVDTIHFMEILNL 300
KTEELRNT SIPKSLLPDYQRLLSS+PSRRLN+SKLIENSEYFQNKLVDTIHFMEIL+L
Sbjct: 241 GKTEELRNTVSIPKSLLPDYQRLLSSVPSRRLNTSKLIENSEYFQNKLVDTIHFMEILSL 300
Query: 301 KDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLSTE 360
KDSVEKDTFFRKLPNLAEQLP+QIVLKKLLPLLASALEFGSA+APALTALLKMGS LS E
Sbjct: 301 KDSVEKDTFFRKLPNLAEQLPQQIVLKKLLPLLASALEFGSASAPALTALLKMGSSLSAE 360
Query: 361 EFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFL 420
EF VKVLPTIVKLFASNDRAIRV LLQHIDQ+G+S SAQVVDEQVYPHVATGF+DTSAFL
Sbjct: 361 EFRVKVLPTIVKLFASNDRAIRVGLLQHIDQFGESLSAQVVDEQVYPHVATGFSDTSAFL 420
Query: 421 REMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRK 480
RE+TLKSML+LAPKLSQRT SGSLLK++SKLQVDEEPAIRTNTTILLGNIASHLNEGTRK
Sbjct: 421 RELTLKSMLILAPKLSQRTFSGSLLKHMSKLQVDEEPAIRTNTTILLGNIASHLNEGTRK 480
Query: 481 RVLINAFTVRALRDTFSPARGAAKIL-----SY--------------------LNCDVRS 515
RVLINAFTVRALRDTF PARGA + SY L+ DVRS
Sbjct: 481 RVLINAFTVRALRDTFPPARGAGIMALCATSSYYDITEIATRILPNVVVLTIDLDSDVRS 540
Query: 516 KAFQAVDQFLQIVKQYHEKTNTGDATGASSVGISSMPGNASLLGWAMSSLTLKGKPSEQA 575
KAFQAVDQFLQ+ KQ++EKTNT +AT +++GISS+PGNA LLGWAMSSLTLKGKPS+ A
Sbjct: 541 KAFQAVDQFLQMAKQHYEKTNTAEATEGTAIGISSLPGNAGLLGWAMSSLTLKGKPSDHA 600
Query: 576 PVASANSITPLTSTTSSTSSVMENAINAPLRHVSSGTDFADQPAGPAPPSPTSTDGWGEI 635
PVAS +S + T T+S+ S ++ AP+R VSS DFA+ P SPTSTDGWGE+
Sbjct: 601 PVASVSS-SARTPTSSNASPAVDAPSTAPVR-VSSTPDFAEH---LVPTSPTSTDGWGEL 655
Query: 636 ENGLHEDHDSDKDGWDDIEPLEEPKPSPVLANIQAAQKRPVSQPR---PTATSLRPKSTG 692
ENGL E+ DKDGWDD+EPLEE KP+P L NIQAAQ+RPVSQP A+SL KST
Sbjct: 656 ENGLGEN---DKDGWDDLEPLEEIKPTPALVNIQAAQRRPVSQPVSQIKQASSLLSKSTP 712
Query: 693 KVPKEEDDDLWGSIAAPAPRTSSKPLNVKPAAALDDDDPWAAIAAPPPTTKAKPLAAGRG 752
K+ K+ED DLWGSIAAPAP+ SSKPL++K + DDDDPWA+IAAP PTTKAKPL+AGRG
Sbjct: 713 KLSKDEDGDLWGSIAAPAPK-SSKPLSLK-STVTDDDDPWASIAAPAPTTKAKPLSAGRG 770
Query: 753 RGAKPVAPKLGAQRINRTS 771
RGAK APKLGAQRINRT+
Sbjct: 771 RGAKLAAPKLGAQRINRTT 789
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224146234|ref|XP_002325930.1| predicted protein [Populus trichocarpa] gi|222862805|gb|EEF00312.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1236 bits (3198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 639/803 (79%), Positives = 695/803 (86%), Gaps = 45/803 (5%)
Query: 1 MFKFLKGVVGG-SGAGVKDLPYNIGDPYPSAWGSWSHFQGTSK--DDGSPVSIFSISGTN 57
M +FLKGVVGG SG G+KDLPYNIGDPYPSAWGSW+H +GTS DDGSPVSIFS S +N
Sbjct: 1 MLRFLKGVVGGASGTGLKDLPYNIGDPYPSAWGSWTHHRGTSSKDDDGSPVSIFSFSASN 60
Query: 58 AQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIK 117
AQD HLAAARNGVKRLRTVRHPNIL+FLHSTEVE+++ +S++ITIYIVTEPVMPLSEKIK
Sbjct: 61 AQDAHLAAARNGVKRLRTVRHPNILSFLHSTEVESVEGSSSRITIYIVTEPVMPLSEKIK 120
Query: 118 ELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177
ELGLEG+QRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCL+SVVVT TLDWKLHAFDVLS
Sbjct: 121 ELGLEGTQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLASVVVTPTLDWKLHAFDVLS 180
Query: 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG 237
EFDG+N A GPMLQY WL+G+QYKP+ELAKSDW A+RKSPPW+IDSWGLGCLIYELF+G
Sbjct: 181 EFDGSNGNATGPMLQYEWLIGSQYKPIELAKSDWVAIRKSPPWAIDSWGLGCLIYELFTG 240
Query: 238 MRLSKTEELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKLVDTIHFMEI 297
M+L KTEELRNTASIPKSLL DYQRLLSSMPSRR+N++KL+ENSEYFQNKLVDTIHFMEI
Sbjct: 241 MKLGKTEELRNTASIPKSLLQDYQRLLSSMPSRRMNTAKLLENSEYFQNKLVDTIHFMEI 300
Query: 298 LNLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMGSWL 357
L LKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMGSWL
Sbjct: 301 LTLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMGSWL 360
Query: 358 STEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTS 417
S EEFSVKVLPTIVKLF+SNDRAIRV+LLQHIDQ+G S SAQVVDEQVY HVATGF+DTS
Sbjct: 361 SAEEFSVKVLPTIVKLFSSNDRAIRVSLLQHIDQFGDSLSAQVVDEQVYSHVATGFSDTS 420
Query: 418 AFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEG 477
A LRE+TLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEE AIRTNTTILLGNIA +LNEG
Sbjct: 421 ALLRELTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEHAIRTNTTILLGNIAIYLNEG 480
Query: 478 TRKRVLINAFTVRALRDTFSPARGAAKIL-----SYLNC--------------------D 512
TRKRVLINAFTVRALRDTF PARGA + SY + D
Sbjct: 481 TRKRVLINAFTVRALRDTFPPARGAGVMALCATSSYYDVTEIATRILPNVVVLTIDPDSD 540
Query: 513 VRSKAFQAVDQFLQIVKQYHEKTNTGDATGASSVGISSMPGNASLLGWAMSSLTLKGKPS 572
VRSK+FQAV+QF+QIVKQYHEKTN GD T AS+ ISS+P NASLLGWAMSSLT+KGKP
Sbjct: 541 VRSKSFQAVEQFMQIVKQYHEKTNVGDTTAAST-RISSIPENASLLGWAMSSLTIKGKPL 599
Query: 573 EQAPVASANSITPLTSTTSSTSSVMENAINAPLRHVSSGTDFADQPAGPAPPSPTSTDGW 632
EQAP+A ANS +PL+STTS+ N+ ++S TD ADQ P P SP STDGW
Sbjct: 600 EQAPLAPANSGSPLSSTTSNA--------NSAAVQINSSTDLADQ---PVPDSPPSTDGW 648
Query: 633 GEIENGLHEDHDSDKDGWDDIEPLEEPKPSPVLANIQAAQKRPVSQP----RPTATSLRP 688
GEIENG+HE+ SDKDGWDDIEP EEPKPSP L NIQAAQKRPVSQP + ATSLRP
Sbjct: 649 GEIENGIHEEQGSDKDGWDDIEPFEEPKPSPALVNIQAAQKRPVSQPVSQHKAQATSLRP 708
Query: 689 KSTGKVPKEEDDDLWGSIAAPAPRTSSKPLNVKPAAALDDDDPWAAIAAPPPTTKAKPLA 748
KST KV +EDDDLWGSIAAPAP+T+++PLNVK A ALDDDDPWAAIAAPPPTT+AKPL
Sbjct: 709 KSTVKVTNDEDDDLWGSIAAPAPKTTTRPLNVKSATALDDDDPWAAIAAPPPTTRAKPLV 768
Query: 749 AGRGRGAKPVAPKLGAQRINRTS 771
AGRGRG KP A KLGAQRINRTS
Sbjct: 769 AGRGRG-KPAASKLGAQRINRTS 790
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449453348|ref|XP_004144420.1| PREDICTED: probable inactive serine/threonine-protein kinase scy1-like [Cucumis sativus] gi|449500052|ref|XP_004160990.1| PREDICTED: probable inactive serine/threonine-protein kinase scy1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1214 bits (3142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 622/797 (78%), Positives = 693/797 (86%), Gaps = 31/797 (3%)
Query: 1 MFKFLKGVVGGSGAGVKDLPYNIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQD 60
MFKFLKGVVGGSG G+KDLPYNIGDPYPSAWGSW+HF+GTSKDDGSPVSIFS+SG+NAQD
Sbjct: 1 MFKFLKGVVGGSGTGLKDLPYNIGDPYPSAWGSWTHFRGTSKDDGSPVSIFSLSGSNAQD 60
Query: 61 GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELG 120
GHLAA RNGVKRLRTVRHPNIL+FLHSTE E ID +++K+TIYIVTEPVMPLSEKIKELG
Sbjct: 61 GHLAAGRNGVKRLRTVRHPNILSFLHSTEAETIDGSASKVTIYIVTEPVMPLSEKIKELG 120
Query: 121 LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180
LEG+QRDEYYAWGL+Q+AKAVSFLNNDCKLVHGNVCL+SVVVT TLDWKLHAFDVLSEFD
Sbjct: 121 LEGTQRDEYYAWGLHQVAKAVSFLNNDCKLVHGNVCLASVVVTPTLDWKLHAFDVLSEFD 180
Query: 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL 240
G+NEA +G MLQYAWL+G+QYKP+EL KSDW A+RKSP W+IDSWGLGCLIYELFSG++L
Sbjct: 181 GSNEATSGQMLQYAWLIGSQYKPMELVKSDWAAIRKSPAWAIDSWGLGCLIYELFSGLKL 240
Query: 241 SKTEELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKLVDTIHFMEILNL 300
KTEELRNTASIPKSLLPDYQRLLSSMPSRRLN+SKLIENSEYFQNKLVDTIHFMEIL+L
Sbjct: 241 GKTEELRNTASIPKSLLPDYQRLLSSMPSRRLNTSKLIENSEYFQNKLVDTIHFMEILSL 300
Query: 301 KDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLSTE 360
KDSVEKDTFFRKLP LAEQLPRQIVLKKLLPLLAS+LEFGSAAAPALTALLKMGSWLSTE
Sbjct: 301 KDSVEKDTFFRKLPILAEQLPRQIVLKKLLPLLASSLEFGSAAAPALTALLKMGSWLSTE 360
Query: 361 EFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFL 420
EFS KVLPTIVKLFASNDRAIR LLQHIDQ+G+S S+Q+VDEQVYPH+ATGF+DTSAFL
Sbjct: 361 EFSAKVLPTIVKLFASNDRAIRTGLLQHIDQFGESLSSQMVDEQVYPHIATGFSDTSAFL 420
Query: 421 REMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRK 480
RE+TLKSMLVLAPKLSQRTISGSLLK+LSKLQVDEEPAIRTNTTILLGNIAS+LN+GTRK
Sbjct: 421 RELTLKSMLVLAPKLSQRTISGSLLKHLSKLQVDEEPAIRTNTTILLGNIASYLNDGTRK 480
Query: 481 RVLINAFTVRALRDTFSPARGA--------------AKILSYL-----------NCDVRS 515
RVLINAFTVRALRDTFSPARGA A+I + + + DVR
Sbjct: 481 RVLINAFTVRALRDTFSPARGAGIMALCATSGYYDSAEIATRILPNVVVLTIDPDSDVRL 540
Query: 516 KAFQAVDQFLQIVKQYHEKTNTGDATGASSVGISSMPGNASLLGWAMSSLTLKGKPSEQA 575
K+FQAVDQFLQI+KQ +EK +GD T A + I S+PGNASLLGWAMSSLTLKGKPSE +
Sbjct: 541 KSFQAVDQFLQILKQNNEKEISGD-TAAGGLNIPSLPGNASLLGWAMSSLTLKGKPSEHS 599
Query: 576 PVASANSITPLTSTTSSTSSVMENAINAPLRHVSSGTDFADQPAGPAPPSPTSTDGWGEI 635
A +S PL +T+S + SV AP+R VSS D +Q A SPTSTDGWGE+
Sbjct: 600 SSAPVSSNAPLGTTSSDSISVENAQTTAPVR-VSSSFDLTEQ---HATESPTSTDGWGEV 655
Query: 636 ENGLHEDHDSDKDGWDDIEPLEEPKPSPVLANIQAAQKRPVSQP-RPTATSLRPKSTGKV 694
ENG+H++ +++KDGWD++EPL+EPKPSP LANIQAAQKRPVSQP T + S
Sbjct: 656 ENGIHDEDETEKDGWDELEPLDEPKPSPALANIQAAQKRPVSQPVSQTKPPILSGSRSAR 715
Query: 695 PKEEDDDLWGSIAAPAPRTSSKPLNVKPAAALDDDDPWAAIAAPPPTTKAKPLAAGRGRG 754
P +EDDDLWGSIAAPAPRT SKPLNVK +A +DDDDPWAAIAAP P+T+AKPL+AGRGRG
Sbjct: 716 PAKEDDDLWGSIAAPAPRTVSKPLNVKSSAPVDDDDPWAAIAAPAPSTRAKPLSAGRGRG 775
Query: 755 AKPVAPKLGAQRINRTS 771
+K APKLGAQRINRTS
Sbjct: 776 SKAAAPKLGAQRINRTS 792
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359486325|ref|XP_003633430.1| PREDICTED: probable inactive serine/threonine-protein kinase scy1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1208 bits (3125), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 634/796 (79%), Positives = 691/796 (86%), Gaps = 37/796 (4%)
Query: 1 MFKFLKGVVGGSGAGVKDLPYNIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQD 60
M KFLKGVV GSGAG+KDLPYNIG+PY SAWGSW+H +GTSKDDGSPVSIFS+SG+NAQD
Sbjct: 1 MLKFLKGVVAGSGAGLKDLPYNIGEPYSSAWGSWTHSRGTSKDDGSPVSIFSLSGSNAQD 60
Query: 61 GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELG 120
GHLAA RNGVKRLRTVRHPNIL+FLHSTE E D +STK+TIYIVTEPVMPLSEKIKELG
Sbjct: 61 GHLAAGRNGVKRLRTVRHPNILSFLHSTEAETFDGSSTKVTIYIVTEPVMPLSEKIKELG 120
Query: 121 LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180
LEG+QRDEYYAWGL+QIAKAVSFLNNDCKLVHGNVCL+SVVVTQTLDWKLHAFDVLSEFD
Sbjct: 121 LEGTQRDEYYAWGLHQIAKAVSFLNNDCKLVHGNVCLASVVVTQTLDWKLHAFDVLSEFD 180
Query: 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL 240
G++EAA GP+LQY WLVG+QYKP+EL KSDW A+RKSPPW+IDSWGL Y L +
Sbjct: 181 GHSEAATGPLLQYEWLVGSQYKPMELLKSDWAAIRKSPPWAIDSWGL-VAFYLLKNSFSF 239
Query: 241 SKTEELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKLVDTIHFMEILNL 300
+ L + +SLLPDYQRLLSSMP+RRLN+SKLIENSEYFQNKLVDTIHFM+ILNL
Sbjct: 240 ASVYFL-----VSQSLLPDYQRLLSSMPARRLNTSKLIENSEYFQNKLVDTIHFMDILNL 294
Query: 301 KDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLSTE 360
KDSVEKDTFFRKLPNLAEQLPRQIVLKKLLP+LASALEFGSAAAPALTALLKM SWLS E
Sbjct: 295 KDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPMLASALEFGSAAAPALTALLKMASWLSAE 354
Query: 361 EFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFL 420
+FS KVLPTIVKLFASNDRAIRV LLQHIDQYG+S SAQ+VDEQVY HVATGF+DTSAFL
Sbjct: 355 DFSAKVLPTIVKLFASNDRAIRVGLLQHIDQYGESLSAQIVDEQVYTHVATGFSDTSAFL 414
Query: 421 REMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRK 480
RE+TLKSML+LAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIAS+LNEGTRK
Sbjct: 415 RELTLKSMLILAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASYLNEGTRK 474
Query: 481 RVLINAFTVRALRDTFSPARGAAKIL-----SYLNC--------------------DVRS 515
RVLINAFTVRALRDTFSPARGA + SY + DVRS
Sbjct: 475 RVLINAFTVRALRDTFSPARGAGVMALCATSSYYDITEIATRILPNVVVLTIDPDSDVRS 534
Query: 516 KAFQAVDQFLQIVKQYHEKTNTGDATGASSVGISSMPGNASLLGWAMSSLTLKGKPSEQA 575
KAFQAVDQFLQIVKQYHEKTN GD TG SS+GISS+PGNASLLGWAMSSLTLK KPSEQA
Sbjct: 535 KAFQAVDQFLQIVKQYHEKTNAGDTTG-SSMGISSIPGNASLLGWAMSSLTLKSKPSEQA 593
Query: 576 PVASANSITPLTSTTSSTSSVMENAINAPLRHVSSGTDFADQPAGPAPPSPTSTDGWGEI 635
P+A ANS PL S +S+ SSVM+ A A + +VSS TDF+DQ P SPTSTDGWGE+
Sbjct: 594 PLAPANSSAPLASASSNDSSVMDTATPASI-NVSSPTDFSDQ---AVPASPTSTDGWGEL 649
Query: 636 ENGLHEDHDSDKDGWDDIEPLEEPKPSPVLANIQAAQKRPVSQPRPTATSLRPKSTGKVP 695
ENG+HE+H+SDKDGWDDIEPLEEPKP LANIQAAQKRPVSQP+P S RPK KV
Sbjct: 650 ENGIHEEHESDKDGWDDIEPLEEPKPPSALANIQAAQKRPVSQPKPQVPS-RPKIPPKVS 708
Query: 696 KEEDDDLWGSIAAPAPRTSSKPLNVKPAAALDDDDPWAAIAAPPPTTKAKPLAAGRGRGA 755
K+EDDDLWGSIAAPAP+T+SKPLNVK A A+D+DDPWAAIAAPPPTT+AKPL+AGRGRGA
Sbjct: 709 KDEDDDLWGSIAAPAPKTASKPLNVKTAGAVDNDDPWAAIAAPPPTTRAKPLSAGRGRGA 768
Query: 756 KPVAPKLGAQRINRTS 771
KP APKLGAQRINRTS
Sbjct: 769 KPAAPKLGAQRINRTS 784
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356568471|ref|XP_003552434.1| PREDICTED: LOW QUALITY PROTEIN: probable inactive serine/threonine-protein kinase scy1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1198 bits (3099), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/799 (77%), Positives = 695/799 (86%), Gaps = 37/799 (4%)
Query: 1 MFKFLKGVVGGSGAGVKDLPYNIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQD 60
MFKFLK VVGGSG GVKDLPY I + YPSAWGSW+H +GTSKDDGSPVS+FS+SG+NAQD
Sbjct: 1 MFKFLKEVVGGSGTGVKDLPYTIAESYPSAWGSWTHSRGTSKDDGSPVSVFSLSGSNAQD 60
Query: 61 GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELG 120
GHLAAARNGVKRLRTVRHPNIL+FLHSTE+E DA S K+TIYIVTEPVMPLSEKIKELG
Sbjct: 61 GHLAAARNGVKRLRTVRHPNILSFLHSTEIETYDAGSPKVTIYIVTEPVMPLSEKIKELG 120
Query: 121 LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180
LEG+QRDEYYA GL+QIAKAVSFLNNDCKLVHGNVC++SVVVT TLDWKLHAFDVLSEFD
Sbjct: 121 LEGTQRDEYYALGLHQIAKAVSFLNNDCKLVHGNVCMASVVVTPTLDWKLHAFDVLSEFD 180
Query: 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL 240
G++E ++G MLQYAWLVG+QYKP+ELAKSDW A++KSPPW+IDSWG+GCLIYE+FSG+RL
Sbjct: 181 GSSEMSSGQMLQYAWLVGSQYKPMELAKSDWDAIKKSPPWAIDSWGMGCLIYEVFSGLRL 240
Query: 241 SKTEELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKLVDTIHFMEILNL 300
KTEELRN SIPKSLLPDYQRLLSSMPSRRLN+SKLIENSEYFQNKLVDTIHFMEIL+L
Sbjct: 241 GKTEELRNIGSIPKSLLPDYQRLLSSMPSRRLNTSKLIENSEYFQNKLVDTIHFMEILSL 300
Query: 301 KDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLSTE 360
KDSVE+DTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAA ALTALLKMGSWLS E
Sbjct: 301 KDSVERDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAASALTALLKMGSWLSAE 360
Query: 361 EFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFL 420
EF+VKVLPTIVKLFASNDRAIRVALLQHIDQYG+S SAQ VDEQVYPHVATGF+DTSAFL
Sbjct: 361 EFNVKVLPTIVKLFASNDRAIRVALLQHIDQYGESLSAQAVDEQVYPHVATGFSDTSAFL 420
Query: 421 REMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRK 480
RE+TLKSML+LAPKLSQRT+SGSLLKYLSKLQVDEEPAIRTNTTILLGNI S+LNEGTRK
Sbjct: 421 RELTLKSMLILAPKLSQRTMSGSLLKYLSKLQVDEEPAIRTNTTILLGNIGSYLNEGTRK 480
Query: 481 RVLINAFTVRALRDTFSPARGAA------------------KILSYL-------NCDVRS 515
RVLINAFTVRALRDTF PARGA +IL + + DVR+
Sbjct: 481 RVLINAFTVRALRDTFPPARGAGIMALCATSSYYDITEVATRILPNVVVLTIDPDSDVRT 540
Query: 516 KAFQAVDQFLQIVKQYHEKTNTGDATGASSVGISSMPGNASLLGWAMSSLTLKGKPSEQA 575
KAFQAVDQFLQI KQ++EKTN D TG + VG SS+PGNASLLGWAMSSLTLKGKPS+ A
Sbjct: 541 KAFQAVDQFLQIAKQHYEKTNAADTTGVAGVGSSSVPGNASLLGWAMSSLTLKGKPSDHA 600
Query: 576 PVASANSITPLTSTTSSTSSVMENAINAPLRHVSSGTDFADQPAGPAPPSPTSTDGWGEI 635
PVASA+S +++++ T+ + E AP R V+S +D A+ P P SPTSTDGWGE+
Sbjct: 601 PVASASSTAITSTSSNGTAGI-ETPSTAPAR-VNSTSDLAEH---PVPTSPTSTDGWGEL 655
Query: 636 ENGLHEDHDSDKDGWDDIEPLEEPKPSPVLANIQAAQKRPVSQP---RPTATSLRPKSTG 692
ENG+ E+H SD+DGWDD+EPLEE KP+ LANIQAAQ+RPVSQP A++L KST
Sbjct: 656 ENGIDEEHGSDRDGWDDLEPLEESKPA--LANIQAAQRRPVSQPISHTKQASNLLSKSTP 713
Query: 693 KVPKEEDDDLWGSIAAPAPRTSSKPLNVKPAAALDDDDPWAAIAAPPPTTKAKPLAAGRG 752
K+ K+EDDDLWGSIAAPAP+T ++PLN+K +A DDDDPWAAIAAP PTTKAKPL+ GRG
Sbjct: 714 KLNKDEDDDLWGSIAAPAPKT-ARPLNLK-SAQTDDDDPWAAIAAPAPTTKAKPLSTGRG 771
Query: 753 RGAKPVAPKLGAQRINRTS 771
RGAKP APKLGAQRINRTS
Sbjct: 772 RGAKPAAPKLGAQRINRTS 790
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356531920|ref|XP_003534524.1| PREDICTED: LOW QUALITY PROTEIN: probable inactive serine/threonine-protein kinase scy1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1193 bits (3087), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 620/799 (77%), Positives = 690/799 (86%), Gaps = 36/799 (4%)
Query: 1 MFKFLKGVVGGSGAGVKDLPYNIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQD 60
MFKFLK VVGGSG GVKDLPY I +PYPSAWGSW+H +GTSKDDGSPVS+FS+SG+NAQD
Sbjct: 1 MFKFLKEVVGGSGTGVKDLPYTIAEPYPSAWGSWTHSRGTSKDDGSPVSVFSLSGSNAQD 60
Query: 61 GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELG 120
GHLAAARNGVKRLRTVRHPNIL+FLHS E+E DA S K+TIYIVTEPVMPLSEKIKELG
Sbjct: 61 GHLAAARNGVKRLRTVRHPNILSFLHSAEIETYDAGSPKVTIYIVTEPVMPLSEKIKELG 120
Query: 121 LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180
LEG+QRDEYYA GL+QIAKAVSFLNNDCKLVHGN+C++S VVT TLDWKLHA DVLSEFD
Sbjct: 121 LEGTQRDEYYALGLHQIAKAVSFLNNDCKLVHGNICMASTVVTPTLDWKLHALDVLSEFD 180
Query: 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL 240
G++EA++G MLQYAWLVG+QYKP+ELAKSDW A++KSPPW+IDSWG+GCLIYE+FSG+RL
Sbjct: 181 GSSEASSGQMLQYAWLVGSQYKPMELAKSDWDAIKKSPPWAIDSWGMGCLIYEVFSGLRL 240
Query: 241 SKTEELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKLVDTIHFMEILNL 300
KTEELRN SIPKSLLPDYQRLLSSMPSRRLN+SKLIENSEYFQNKLVDTIHFMEIL+L
Sbjct: 241 GKTEELRNIGSIPKSLLPDYQRLLSSMPSRRLNTSKLIENSEYFQNKLVDTIHFMEILSL 300
Query: 301 KDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLSTE 360
KDSVE+DTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAA ALTALLKMGSWLS E
Sbjct: 301 KDSVERDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAASALTALLKMGSWLSAE 360
Query: 361 EFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFL 420
EF+VKVLPTIVKLFASNDRAIRVALLQHIDQYG+S SAQ VDEQVYPHVATGF+DTSAFL
Sbjct: 361 EFNVKVLPTIVKLFASNDRAIRVALLQHIDQYGESLSAQAVDEQVYPHVATGFSDTSAFL 420
Query: 421 REMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRK 480
RE+TLKSML+LAPKLSQRT+SGSLLKYLSKLQVDEEPAIRTNTTILLGNI S+LNEGTRK
Sbjct: 421 RELTLKSMLILAPKLSQRTMSGSLLKYLSKLQVDEEPAIRTNTTILLGNIGSYLNEGTRK 480
Query: 481 RVLINAFTVRALRDTFSPARGAA------------------KILSYL-------NCDVRS 515
RVLINAFTVRALRDTF PARGA +IL + + DVR+
Sbjct: 481 RVLINAFTVRALRDTFPPARGAGIMALCATSSYYDITEVATRILPNVVVLTIDPDSDVRT 540
Query: 516 KAFQAVDQFLQIVKQYHEKTNTGDATGASSVGISSMPGNASLLGWAMSSLTLKGKPSEQA 575
KAFQAVDQFLQI KQ++EKTN D + VG SS+PGNASLLGWAMSSLTLKGKPS+ A
Sbjct: 541 KAFQAVDQFLQIAKQHYEKTNAADTS--CGVGSSSVPGNASLLGWAMSSLTLKGKPSDHA 598
Query: 576 PVASANSITPLTSTTSSTSSVMENAINAPLRHVSSGTDFADQPAGPAPPSPTSTDGWGEI 635
PVASA+S +++++ T +E A HVSS D A+ P P SPTSTDGWGE+
Sbjct: 599 PVASASSTAITSTSSNGTXLGIETPSTAA-AHVSSTADLAEHPV---PTSPTSTDGWGEL 654
Query: 636 ENGLHEDHDSDKDGWDDIEPLEEPKPSPVLANIQAAQKRPVSQP---RPTATSLRPKSTG 692
ENG+ E+H SD+DGWDD+EPLEE KP+P LANIQAAQ+RPVSQP A++L KST
Sbjct: 655 ENGIDEEHGSDRDGWDDLEPLEETKPAPALANIQAAQRRPVSQPISHTKQASNLLSKSTP 714
Query: 693 KVPKEEDDDLWGSIAAPAPRTSSKPLNVKPAAALDDDDPWAAIAAPPPTTKAKPLAAGRG 752
K+ K+EDDDLWGSIAAPAP+T ++PLN+K +A DDDDPWAAIAAP PT KAKPL+AGRG
Sbjct: 715 KLNKDEDDDLWGSIAAPAPKT-ARPLNLK-SAQTDDDDPWAAIAAPAPTIKAKPLSAGRG 772
Query: 753 RGAKPVAPKLGAQRINRTS 771
RGAKP APKLGAQRINRTS
Sbjct: 773 RGAKPAAPKLGAQRINRTS 791
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255559707|ref|XP_002520873.1| ATP binding protein, putative [Ricinus communis] gi|223540004|gb|EEF41582.1| ATP binding protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1184 bits (3064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 630/798 (78%), Positives = 687/798 (86%), Gaps = 37/798 (4%)
Query: 1 MFKFLKGVVGGSGAGVKDLPYNIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQD 60
M KFLKGVVGGSG GVKDLPYNIG+PYPSAWGSW+H +GTSKDDGSPVS+FS+SG+NAQD
Sbjct: 1 MLKFLKGVVGGSGTGVKDLPYNIGEPYPSAWGSWTHHRGTSKDDGSPVSVFSLSGSNAQD 60
Query: 61 GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELG 120
GHLAA RNGVKRLRTVRHPNIL+FLHSTEVE D +++K+TIY+VTEPVMPLSEKIKELG
Sbjct: 61 GHLAAGRNGVKRLRTVRHPNILSFLHSTEVETFDGSTSKVTIYMVTEPVMPLSEKIKELG 120
Query: 121 LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180
LEG+QRDEYYAWGL+QIAKAVSFLNNDCKLVHGNVC++S+VVT TLDWKLHAFDVLSEFD
Sbjct: 121 LEGTQRDEYYAWGLHQIAKAVSFLNNDCKLVHGNVCMASIVVTPTLDWKLHAFDVLSEFD 180
Query: 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL 240
GNNE A GPMLQY WL+G QYKP+EL KSDW ++RKSP W+IDSWGL I +S
Sbjct: 181 GNNETATGPMLQYEWLIGTQYKPMELVKSDWVSIRKSPTWAIDSWGLVAWISSEYS-FYF 239
Query: 241 SKTEELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKLVDTIHFMEILNL 300
+ L +SLL DYQRLLSSMPSRR+N+SKLIEN EYFQNKLVDTIHFMEIL L
Sbjct: 240 ASVYFL-----ALQSLLQDYQRLLSSMPSRRMNTSKLIENGEYFQNKLVDTIHFMEILTL 294
Query: 301 KDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLSTE 360
KDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLAS+LEFGSAAAPALTALLKMGSWLS E
Sbjct: 295 KDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASSLEFGSAAAPALTALLKMGSWLSAE 354
Query: 361 EFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFL 420
EFS KVLPTIVKLFASNDRAIRV+LLQHIDQYG+S SAQVVDEQVYPHVATGF+DTSAFL
Sbjct: 355 EFSAKVLPTIVKLFASNDRAIRVSLLQHIDQYGESLSAQVVDEQVYPHVATGFSDTSAFL 414
Query: 421 REMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRK 480
RE+TLKSMLVLAPKLSQRTISG+LLKYLSKLQVDEEPAIRTNTTILLGNIAS LNEGTRK
Sbjct: 415 RELTLKSMLVLAPKLSQRTISGTLLKYLSKLQVDEEPAIRTNTTILLGNIASFLNEGTRK 474
Query: 481 RVLINAFTVRALRDTFSPARGAA------------------KILSYL-------NCDVRS 515
RVLINAFTVRALRDTFSPARGA +IL + + DVRS
Sbjct: 475 RVLINAFTVRALRDTFSPARGAGIMALCATSSYYDINEIATRILPNVVVLTIDGDSDVRS 534
Query: 516 KAFQAVDQFLQIVKQYHEKTNTGDATGASSVGISSMPGNASLLGWAMSSLTLKGKPSEQA 575
KAFQAV+QFLQIVKQYHEKTN GD + A+++GISS+PGNASLLGWAMSSLTLKGKPSEQA
Sbjct: 535 KAFQAVEQFLQIVKQYHEKTNAGDTSAATTLGISSIPGNASLLGWAMSSLTLKGKPSEQA 594
Query: 576 PVASANSITPLTSTTSSTSSVMENAINAPLRHVSSGTDFADQPAGPAPPSPTSTDGWGEI 635
+A NS PL ST S+ SSV++ AP+R V+S TDFADQ P P SPTSTDGWGEI
Sbjct: 595 SLAPVNSDAPLISTASNASSVLDTPSAAPIR-VNSSTDFADQ---PVPGSPTSTDGWGEI 650
Query: 636 ENGLHEDHDSDKDGWDDIEPLEEPKPSPVLANIQAAQKRPVSQP--RPTATSLRPKSTGK 693
ENG E+HDSDKDGWDDIEPLEEPKPSP LANIQAAQKRPVSQP +P LRPK+ K
Sbjct: 651 ENGTQEEHDSDKDGWDDIEPLEEPKPSPALANIQAAQKRPVSQPVSQPRQQGLRPKNAVK 710
Query: 694 VPKEEDDDLWGSIAAPAPRTSSKPLNVKPAAALDDDDPWAAIAAPPPTTKAKPLAAGRGR 753
V K+EDDDLWGSIAAPAP+T+SKPLNV+ A+A DDDDPWAAIAAPPPTTKAKPL+AGRGR
Sbjct: 711 VTKDEDDDLWGSIAAPAPKTTSKPLNVRAASAADDDDPWAAIAAPPPTTKAKPLSAGRGR 770
Query: 754 GAKPVAPKLGAQRINRTS 771
G KP A KLGAQRINRTS
Sbjct: 771 GTKPAALKLGAQRINRTS 788
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 771 | ||||||
| TAIR|locus:2064821 | 798 | CTEXP "AT2G40730" [Arabidopsis | 0.651 | 0.629 | 0.838 | 5.2e-294 | |
| UNIPROTKB|A6QLH6 | 807 | SCYL1 "N-terminal kinase-like | 0.616 | 0.588 | 0.392 | 1.6e-95 | |
| UNIPROTKB|F1MVK2 | 807 | SCYL1 "N-terminal kinase-like | 0.616 | 0.588 | 0.392 | 1.6e-95 | |
| RGD|1307330 | 807 | Scyl1 "SCY1-like 1 (S. cerevis | 0.616 | 0.588 | 0.392 | 1.6e-95 | |
| UNIPROTKB|Q5M9F8 | 807 | Scyl1 "N-terminal kinase-like | 0.616 | 0.588 | 0.392 | 1.6e-95 | |
| UNIPROTKB|E9PK59 | 780 | SCYL1 "N-terminal kinase-like | 0.616 | 0.608 | 0.388 | 3.4e-95 | |
| UNIPROTKB|E9PS17 | 775 | SCYL1 "N-terminal kinase-like | 0.616 | 0.612 | 0.388 | 3.4e-95 | |
| UNIPROTKB|Q96KG9 | 808 | SCYL1 "N-terminal kinase-like | 0.616 | 0.587 | 0.388 | 3.4e-95 | |
| MGI|MGI:1931787 | 806 | Scyl1 "SCY1-like 1 (S. cerevis | 0.616 | 0.589 | 0.386 | 3.4e-95 | |
| UNIPROTKB|E2QUV4 | 791 | SCYL1 "Uncharacterized protein | 0.616 | 0.600 | 0.392 | 8.9e-94 |
| TAIR|locus:2064821 CTEXP "AT2G40730" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2212 (783.7 bits), Expect = 5.2e-294, Sum P(2) = 5.2e-294
Identities = 421/502 (83%), Positives = 458/502 (91%)
Query: 1 MFKFLKXXXXXXXXXXKDLPYNIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQD 60
MFKFLK KDLPYNIGDPYPSAWGSWSHF+GTSKDDGSPVSIF++SG NAQD
Sbjct: 1 MFKFLKGVVAGSGTGLKDLPYNIGDPYPSAWGSWSHFRGTSKDDGSPVSIFALSGNNAQD 60
Query: 61 GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELG 120
GHLAA RNGVKRLRTVRHPNIL+FLHSTEVE D ++TK+TIYIVTEPVMPLS+KIKELG
Sbjct: 61 GHLAAGRNGVKRLRTVRHPNILSFLHSTEVETHDGSTTKVTIYIVTEPVMPLSDKIKELG 120
Query: 121 LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180
L+ +QRDEY+A GL+QI KAVSFLNNDCKLVHGNVCL+SVVVT TLDWKLHA DVLSEFD
Sbjct: 121 LKATQRDEYFALGLHQIGKAVSFLNNDCKLVHGNVCLASVVVTPTLDWKLHALDVLSEFD 180
Query: 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL 240
G+NE+A+GPML Y WLVG QYKP+E+ KSDW A+RKSPPW+IDSWGLGCLIYELFSG +L
Sbjct: 181 GSNESASGPMLPYEWLVGTQYKPMEMVKSDWVAIRKSPPWAIDSWGLGCLIYELFSGSKL 240
Query: 241 SKTEELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKLVDTIHFMEILNL 300
+KTEELRNT IPKSLLPDYQRLLSSMPSRRLN+SKL+EN EYFQNKLVDTIHFM+ILNL
Sbjct: 241 AKTEELRNTVGIPKSLLPDYQRLLSSMPSRRLNTSKLLENGEYFQNKLVDTIHFMDILNL 300
Query: 301 KDSVEKDTFFRKLPNLAEQLPRQIVXXXXXXXXXXXXEFGSAAAPALTALLKMGSWLSTE 360
KDSVEKDTFFRKLPN+AEQLPR+IV EFGSAAAPALTALLKMGSWLSTE
Sbjct: 301 KDSVEKDTFFRKLPNVAEQLPREIVLKKLLPLLASSLEFGSAAAPALTALLKMGSWLSTE 360
Query: 361 EFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFL 420
+FSVKVLPTIVKLFASNDRAIRV+LLQH+DQ+G+S S Q+VDEQVYPHVATGFADTSAFL
Sbjct: 361 DFSVKVLPTIVKLFASNDRAIRVSLLQHVDQFGESMSGQIVDEQVYPHVATGFADTSAFL 420
Query: 421 REMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRK 480
RE+TLKSMLVLAPKLSQRT+SGSLLKYLSKLQVDEEPAIRTNTTILLGNIA++LNEGTRK
Sbjct: 421 RELTLKSMLVLAPKLSQRTLSGSLLKYLSKLQVDEEPAIRTNTTILLGNIATYLNEGTRK 480
Query: 481 RVLINAFTVRALRDTFSPARGA 502
RVLINAFTVRALRDTF PARGA
Sbjct: 481 RVLINAFTVRALRDTFPPARGA 502
|
|
| UNIPROTKB|A6QLH6 SCYL1 "N-terminal kinase-like protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 882 (315.5 bits), Expect = 1.6e-95, Sum P(3) = 1.6e-95
Identities = 196/499 (39%), Positives = 285/499 (57%)
Query: 17 KDLPYNIGDPYP--SAWGSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLR 74
+D P+ + P S G W +G K GSPVSIF + A+ KRL+
Sbjct: 10 RDFPFELSPEPPEGSPPGPWVLHRGRKKATGSPVSIFVYDVKPVAEEQTQVAKAAFKRLK 69
Query: 75 TVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGL 134
T+RHPNILA+ ID T +++VTE V PL +K G ++ +WGL
Sbjct: 70 TLRHPNILAY--------IDGLETDKCLHVVTEAVTPLGVYLKARAEAGGLKELELSWGL 121
Query: 135 NQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYA 194
+QI KA+SFL NDC L+H NVC+++V V + +WKL D + GN GP +
Sbjct: 122 HQIVKALSFLVNDCSLIHNNVCMAAVFVDRAGEWKLGGLDYMYSAQGNG---GGPPRKGI 178
Query: 195 WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTASIPK 254
+ QY P ELA AVR+ WS D W LGCLI+E+F+G L + LRN IPK
Sbjct: 179 PEL-EQYDPPELADGSGRAVREK--WSADMWRLGCLIWEVFNGP-LPRAAALRNPGKIPK 234
Query: 255 SLLPDYQRLLSSMPSRRLNSSKLIENSE----YFQNKLVDTIHFMEILNLKDSVEKDTFF 310
SL+P Y L+ + P R N ++ ++N + N+ V+T F+E + +K+ EK FF
Sbjct: 235 SLVPHYCELVGANPKVRPNPARFLQNCRAPGGFMNNRFVETNLFLEEIQIKEPAEKQKFF 294
Query: 311 RKLPNLAEQLPRQIVXXXXXXXXXXXXEFGSAAAPALTALLKMGSWLSTEEFSVKVLPTI 370
++L + P EFGSA A LT L K+G +L+ EE+ K++P +
Sbjct: 295 QELSKSLDSFPEDFCRHKVLPQLLTAFEFGSAGAVVLTPLFKVGKFLNAEEYQQKIIPVV 354
Query: 371 VKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLV 430
VK+F+S DRA+R+ LLQ ++Q+ Q V+ Q++PHV GF DT+ +RE T+KSML+
Sbjct: 355 VKMFSSTDRAMRIRLLQQMEQFIQYLDEPTVNTQIFPHVVHGFLDTNPAIREQTVKSMLL 414
Query: 431 LAPKLSQRTISGSLLKYLSKLQV-DEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTV 489
LAPKL++ ++ L+K+ ++LQ DE+ IR NTT+ LG I S+L+ TR RVL +AF+
Sbjct: 415 LAPKLNETNLNVELMKHFARLQAKDEQGPIRCNTTVCLGKIGSYLSASTRHRVLTSAFS- 473
Query: 490 RALRDTFSPARGAAKILSY 508
RA +D F+P+R A +L +
Sbjct: 474 RATKDPFAPSR-VAGVLGF 491
|
|
| UNIPROTKB|F1MVK2 SCYL1 "N-terminal kinase-like protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 882 (315.5 bits), Expect = 1.6e-95, Sum P(3) = 1.6e-95
Identities = 196/499 (39%), Positives = 285/499 (57%)
Query: 17 KDLPYNIGDPYP--SAWGSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLR 74
+D P+ + P S G W +G K GSPVSIF + A+ KRL+
Sbjct: 10 RDFPFELSPEPPEGSPPGPWVLHRGRKKATGSPVSIFVYDVKPGAEEQTQVAKAAFKRLK 69
Query: 75 TVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGL 134
T+RHPNILA+ ID T +++VTE V PL +K G ++ +WGL
Sbjct: 70 TLRHPNILAY--------IDGLETDKCLHVVTEAVTPLGVYLKARAEAGGLKELELSWGL 121
Query: 135 NQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYA 194
+QI KA+SFL NDC L+H NVC+++V V + +WKL D + GN GP +
Sbjct: 122 HQIVKALSFLVNDCSLIHNNVCMAAVFVDRAGEWKLGGLDYMYSAQGNG---GGPPRKGI 178
Query: 195 WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTASIPK 254
+ QY P ELA AVR+ WS D W LGCLI+E+F+G L + LRN IPK
Sbjct: 179 PEL-EQYDPPELADGSGRAVREK--WSADMWRLGCLIWEVFNGP-LPRAAALRNPGKIPK 234
Query: 255 SLLPDYQRLLSSMPSRRLNSSKLIENSE----YFQNKLVDTIHFMEILNLKDSVEKDTFF 310
SL+P Y L+ + P R N ++ ++N + N+ V+T F+E + +K+ EK FF
Sbjct: 235 SLVPHYCELVGANPKVRPNPARFLQNCRAPGGFMNNRFVETNLFLEEIQIKEPAEKQKFF 294
Query: 311 RKLPNLAEQLPRQIVXXXXXXXXXXXXEFGSAAAPALTALLKMGSWLSTEEFSVKVLPTI 370
++L + P EFGSA A LT L K+G +L+ EE+ K++P +
Sbjct: 295 QELSKSLDSFPEDFCRHKVLPQLLTAFEFGSAGAVVLTPLFKVGKFLNAEEYQQKIIPVV 354
Query: 371 VKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLV 430
VK+F+S DRA+R+ LLQ ++Q+ Q V+ Q++PHV GF DT+ +RE T+KSML+
Sbjct: 355 VKMFSSTDRAMRIRLLQQMEQFIQYLDEPTVNTQIFPHVVHGFLDTNPAIREQTVKSMLL 414
Query: 431 LAPKLSQRTISGSLLKYLSKLQV-DEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTV 489
LAPKL++ ++ L+K+ ++LQ DE+ IR NTT+ LG I S+L+ TR RVL +AF+
Sbjct: 415 LAPKLNETNLNVELMKHFARLQAKDEQGPIRCNTTVCLGKIGSYLSASTRHRVLTSAFS- 473
Query: 490 RALRDTFSPARGAAKILSY 508
RA +D F+P+R A +L +
Sbjct: 474 RATKDPFAPSR-VAGVLGF 491
|
|
| RGD|1307330 Scyl1 "SCY1-like 1 (S. cerevisiae)" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 877 (313.8 bits), Expect = 1.6e-95, Sum P(3) = 1.6e-95
Identities = 196/499 (39%), Positives = 285/499 (57%)
Query: 17 KDLPYNIGDPYPSAW--GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLR 74
+D P+ + P G W +G K GS VSIF + A+ KRL+
Sbjct: 10 RDFPFELNPEPPEGGPPGPWVLHRGRKKATGSAVSIFVYDVKPGAEEQTQVAKAAFKRLK 69
Query: 75 TVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGL 134
T+RHPNILA+ ID T+ ++IVTE V PL +K G +++ +WGL
Sbjct: 70 TLRHPNILAY--------IDGLETEKCLHIVTEAVTPLGTYLKARAEAGGLKEQELSWGL 121
Query: 135 NQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYA 194
+QI KA+SFL NDC L+H NVC+++V V + +WKL D + GN GP +
Sbjct: 122 HQIVKALSFLVNDCNLIHNNVCMAAVFVDKAGEWKLGGLDYMYSAQGNG---GGPPNKGI 178
Query: 195 WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTASIPK 254
+ QY P ELA S AV++ WS D W LGCLI+E+F+G L + LRN IPK
Sbjct: 179 PEL-EQYDPPELADSSSRAVKEK--WSADMWRLGCLIWEVFNGS-LPRATALRNPGKIPK 234
Query: 255 SLLPDYQRLLSSMPSRRLNSSKLIENSE----YFQNKLVDTIHFMEILNLKDSVEKDTFF 310
SL+ Y L+ + P R N ++ ++N + N+ V+T F+E + +K+ EK FF
Sbjct: 235 SLVTHYCELVGANPKVRPNPARFLQNCRAPGGFMSNRFVETNLFLEEIQIKEPAEKQKFF 294
Query: 311 RKLPNLAEQLPRQIVXXXXXXXXXXXXEFGSAAAPALTALLKMGSWLSTEEFSVKVLPTI 370
++L + P EFG+A A LT L K+G +LS EE+ K++P +
Sbjct: 295 QELSKSLDSFPEDFCRHKVLPQLLTAFEFGNAGAVVLTPLFKVGKFLSAEEYQQKIIPVV 354
Query: 371 VKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLV 430
VK+F+S DRA+RV LLQ ++Q+ Q V+ Q++PHV GF DT+ +RE T+KSML+
Sbjct: 355 VKMFSSTDRAMRVRLLQQMEQFIQYLDEPTVNTQIFPHVTHGFLDTNPAIREQTVKSMLL 414
Query: 431 LAPKLSQRTISGSLLKYLSKLQV-DEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTV 489
LAPKLS+ ++ LLK+ ++LQ D++ IR NTT+ LG I S+L+ TR RVL +AF+
Sbjct: 415 LAPKLSETNLNVELLKHFARLQAKDDQGPIRCNTTVCLGKIGSYLSASTRHRVLTSAFS- 473
Query: 490 RALRDTFSPARGAAKILSY 508
RA +D F+P+R A +L +
Sbjct: 474 RATKDPFAPSR-VAGVLGF 491
|
|
| UNIPROTKB|Q5M9F8 Scyl1 "N-terminal kinase-like protein" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 877 (313.8 bits), Expect = 1.6e-95, Sum P(3) = 1.6e-95
Identities = 196/499 (39%), Positives = 285/499 (57%)
Query: 17 KDLPYNIGDPYPSAW--GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLR 74
+D P+ + P G W +G K GS VSIF + A+ KRL+
Sbjct: 10 RDFPFELNPEPPEGGPPGPWVLHRGRKKATGSAVSIFVYDVKPGAEEQTQVAKAAFKRLK 69
Query: 75 TVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGL 134
T+RHPNILA+ ID T+ ++IVTE V PL +K G +++ +WGL
Sbjct: 70 TLRHPNILAY--------IDGLETEKCLHIVTEAVTPLGTYLKARAEAGGLKEQELSWGL 121
Query: 135 NQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYA 194
+QI KA+SFL NDC L+H NVC+++V V + +WKL D + GN GP +
Sbjct: 122 HQIVKALSFLVNDCNLIHNNVCMAAVFVDKAGEWKLGGLDYMYSAQGNG---GGPPNKGI 178
Query: 195 WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTASIPK 254
+ QY P ELA S AV++ WS D W LGCLI+E+F+G L + LRN IPK
Sbjct: 179 PEL-EQYDPPELADSSSRAVKEK--WSADMWRLGCLIWEVFNGS-LPRATALRNPGKIPK 234
Query: 255 SLLPDYQRLLSSMPSRRLNSSKLIENSE----YFQNKLVDTIHFMEILNLKDSVEKDTFF 310
SL+ Y L+ + P R N ++ ++N + N+ V+T F+E + +K+ EK FF
Sbjct: 235 SLVTHYCELVGANPKVRPNPARFLQNCRAPGGFMSNRFVETNLFLEEIQIKEPAEKQKFF 294
Query: 311 RKLPNLAEQLPRQIVXXXXXXXXXXXXEFGSAAAPALTALLKMGSWLSTEEFSVKVLPTI 370
++L + P EFG+A A LT L K+G +LS EE+ K++P +
Sbjct: 295 QELSKSLDSFPEDFCRHKVLPQLLTAFEFGNAGAVVLTPLFKVGKFLSAEEYQQKIIPVV 354
Query: 371 VKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLV 430
VK+F+S DRA+RV LLQ ++Q+ Q V+ Q++PHV GF DT+ +RE T+KSML+
Sbjct: 355 VKMFSSTDRAMRVRLLQQMEQFIQYLDEPTVNTQIFPHVTHGFLDTNPAIREQTVKSMLL 414
Query: 431 LAPKLSQRTISGSLLKYLSKLQV-DEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTV 489
LAPKLS+ ++ LLK+ ++LQ D++ IR NTT+ LG I S+L+ TR RVL +AF+
Sbjct: 415 LAPKLSETNLNVELLKHFARLQAKDDQGPIRCNTTVCLGKIGSYLSASTRHRVLTSAFS- 473
Query: 490 RALRDTFSPARGAAKILSY 508
RA +D F+P+R A +L +
Sbjct: 474 RATKDPFAPSR-VAGVLGF 491
|
|
| UNIPROTKB|E9PK59 SCYL1 "N-terminal kinase-like protein" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 873 (312.4 bits), Expect = 3.4e-95, Sum P(3) = 3.4e-95
Identities = 194/499 (38%), Positives = 285/499 (57%)
Query: 17 KDLPYNIGDPYPSAW--GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLR 74
+D P+ + P G W+ +G K GSPVSIF + A+ KR +
Sbjct: 10 RDFPFELIPEPPEGGLPGPWALHRGRKKATGSPVSIFVYDVKPGAEEQTQVAKAAFKRFK 69
Query: 75 TVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGL 134
T+RHPNILA+ ID T+ +++VTE V PL +K G ++ +WGL
Sbjct: 70 TLRHPNILAY--------IDGLETEKCLHVVTEAVTPLGIYLKARVEAGGLKELEISWGL 121
Query: 135 NQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYA 194
+QI KA+SFL NDC L+H NVC+++V V + +WKL D + GN GP +
Sbjct: 122 HQIVKALSFLVNDCSLIHNNVCMAAVFVDRAGEWKLGGLDYMYSAQGNG---GGPPRKGI 178
Query: 195 WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTASIPK 254
+ QY P ELA S VR+ WS D W LGCLI+E+F+G L + LRN IPK
Sbjct: 179 PEL-EQYDPPELADSSGRVVREK--WSADMWRLGCLIWEVFNGP-LPRAAALRNPGKIPK 234
Query: 255 SLLPDYQRLLSSMPSRRLNSSKLIENSE----YFQNKLVDTIHFMEILNLKDSVEKDTFF 310
+L+P Y L+ + P R N ++ ++N + N+ V+T F+E + +K+ EK FF
Sbjct: 235 TLVPHYCELVGANPKVRPNPARFLQNCRAPGGFMSNRFVETNLFLEEIQIKEPAEKQKFF 294
Query: 311 RKLPNLAEQLPRQIVXXXXXXXXXXXXEFGSAAAPALTALLKMGSWLSTEEFSVKVLPTI 370
++L + P EFG+A A LT L K+G +LS EE+ K++P +
Sbjct: 295 QELSKSLDAFPEDFCRHKVLPQLLTAFEFGNAGAVVLTPLFKVGKFLSAEEYQQKIIPVV 354
Query: 371 VKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLV 430
VK+F+S DRA+R+ LLQ ++Q+ Q V+ Q++PHV GF DT+ +RE T+KSML+
Sbjct: 355 VKMFSSTDRAMRIRLLQQMEQFIQYLDEPTVNTQIFPHVVHGFLDTNPAIREQTVKSMLL 414
Query: 431 LAPKLSQRTISGSLLKYLSKLQV-DEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTV 489
LAPKL++ ++ L+K+ ++LQ DE+ IR NTT+ LG I S+L+ TR RVL +AF+
Sbjct: 415 LAPKLNEANLNVELMKHFARLQAKDEQGPIRCNTTVCLGKIGSYLSASTRHRVLTSAFS- 473
Query: 490 RALRDTFSPARGAAKILSY 508
RA RD F+P+R A +L +
Sbjct: 474 RATRDPFAPSR-VAGVLGF 491
|
|
| UNIPROTKB|E9PS17 SCYL1 "N-terminal kinase-like protein" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 873 (312.4 bits), Expect = 3.4e-95, Sum P(3) = 3.4e-95
Identities = 194/499 (38%), Positives = 285/499 (57%)
Query: 17 KDLPYNIGDPYPSAW--GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLR 74
+D P+ + P G W+ +G K GSPVSIF + A+ KR +
Sbjct: 10 RDFPFELIPEPPEGGLPGPWALHRGRKKATGSPVSIFVYDVKPGAEEQTQVAKAAFKRFK 69
Query: 75 TVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGL 134
T+RHPNILA+ ID T+ +++VTE V PL +K G ++ +WGL
Sbjct: 70 TLRHPNILAY--------IDGLETEKCLHVVTEAVTPLGIYLKARVEAGGLKELEISWGL 121
Query: 135 NQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYA 194
+QI KA+SFL NDC L+H NVC+++V V + +WKL D + GN GP +
Sbjct: 122 HQIVKALSFLVNDCSLIHNNVCMAAVFVDRAGEWKLGGLDYMYSAQGNG---GGPPRKGI 178
Query: 195 WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTASIPK 254
+ QY P ELA S VR+ WS D W LGCLI+E+F+G L + LRN IPK
Sbjct: 179 PEL-EQYDPPELADSSGRVVREK--WSADMWRLGCLIWEVFNGP-LPRAAALRNPGKIPK 234
Query: 255 SLLPDYQRLLSSMPSRRLNSSKLIENSE----YFQNKLVDTIHFMEILNLKDSVEKDTFF 310
+L+P Y L+ + P R N ++ ++N + N+ V+T F+E + +K+ EK FF
Sbjct: 235 TLVPHYCELVGANPKVRPNPARFLQNCRAPGGFMSNRFVETNLFLEEIQIKEPAEKQKFF 294
Query: 311 RKLPNLAEQLPRQIVXXXXXXXXXXXXEFGSAAAPALTALLKMGSWLSTEEFSVKVLPTI 370
++L + P EFG+A A LT L K+G +LS EE+ K++P +
Sbjct: 295 QELSKSLDAFPEDFCRHKVLPQLLTAFEFGNAGAVVLTPLFKVGKFLSAEEYQQKIIPVV 354
Query: 371 VKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLV 430
VK+F+S DRA+R+ LLQ ++Q+ Q V+ Q++PHV GF DT+ +RE T+KSML+
Sbjct: 355 VKMFSSTDRAMRIRLLQQMEQFIQYLDEPTVNTQIFPHVVHGFLDTNPAIREQTVKSMLL 414
Query: 431 LAPKLSQRTISGSLLKYLSKLQV-DEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTV 489
LAPKL++ ++ L+K+ ++LQ DE+ IR NTT+ LG I S+L+ TR RVL +AF+
Sbjct: 415 LAPKLNEANLNVELMKHFARLQAKDEQGPIRCNTTVCLGKIGSYLSASTRHRVLTSAFS- 473
Query: 490 RALRDTFSPARGAAKILSY 508
RA RD F+P+R A +L +
Sbjct: 474 RATRDPFAPSR-VAGVLGF 491
|
|
| UNIPROTKB|Q96KG9 SCYL1 "N-terminal kinase-like protein" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 873 (312.4 bits), Expect = 3.4e-95, Sum P(3) = 3.4e-95
Identities = 194/499 (38%), Positives = 285/499 (57%)
Query: 17 KDLPYNIGDPYPSAW--GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLR 74
+D P+ + P G W+ +G K GSPVSIF + A+ KR +
Sbjct: 10 RDFPFELIPEPPEGGLPGPWALHRGRKKATGSPVSIFVYDVKPGAEEQTQVAKAAFKRFK 69
Query: 75 TVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGL 134
T+RHPNILA+ ID T+ +++VTE V PL +K G ++ +WGL
Sbjct: 70 TLRHPNILAY--------IDGLETEKCLHVVTEAVTPLGIYLKARVEAGGLKELEISWGL 121
Query: 135 NQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYA 194
+QI KA+SFL NDC L+H NVC+++V V + +WKL D + GN GP +
Sbjct: 122 HQIVKALSFLVNDCSLIHNNVCMAAVFVDRAGEWKLGGLDYMYSAQGNG---GGPPRKGI 178
Query: 195 WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTASIPK 254
+ QY P ELA S VR+ WS D W LGCLI+E+F+G L + LRN IPK
Sbjct: 179 PEL-EQYDPPELADSSGRVVREK--WSADMWRLGCLIWEVFNGP-LPRAAALRNPGKIPK 234
Query: 255 SLLPDYQRLLSSMPSRRLNSSKLIENSE----YFQNKLVDTIHFMEILNLKDSVEKDTFF 310
+L+P Y L+ + P R N ++ ++N + N+ V+T F+E + +K+ EK FF
Sbjct: 235 TLVPHYCELVGANPKVRPNPARFLQNCRAPGGFMSNRFVETNLFLEEIQIKEPAEKQKFF 294
Query: 311 RKLPNLAEQLPRQIVXXXXXXXXXXXXEFGSAAAPALTALLKMGSWLSTEEFSVKVLPTI 370
++L + P EFG+A A LT L K+G +LS EE+ K++P +
Sbjct: 295 QELSKSLDAFPEDFCRHKVLPQLLTAFEFGNAGAVVLTPLFKVGKFLSAEEYQQKIIPVV 354
Query: 371 VKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLV 430
VK+F+S DRA+R+ LLQ ++Q+ Q V+ Q++PHV GF DT+ +RE T+KSML+
Sbjct: 355 VKMFSSTDRAMRIRLLQQMEQFIQYLDEPTVNTQIFPHVVHGFLDTNPAIREQTVKSMLL 414
Query: 431 LAPKLSQRTISGSLLKYLSKLQV-DEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTV 489
LAPKL++ ++ L+K+ ++LQ DE+ IR NTT+ LG I S+L+ TR RVL +AF+
Sbjct: 415 LAPKLNEANLNVELMKHFARLQAKDEQGPIRCNTTVCLGKIGSYLSASTRHRVLTSAFS- 473
Query: 490 RALRDTFSPARGAAKILSY 508
RA RD F+P+R A +L +
Sbjct: 474 RATRDPFAPSR-VAGVLGF 491
|
|
| MGI|MGI:1931787 Scyl1 "SCY1-like 1 (S. cerevisiae)" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 866 (309.9 bits), Expect = 3.4e-95, Sum P(3) = 3.4e-95
Identities = 193/499 (38%), Positives = 283/499 (56%)
Query: 17 KDLPYNIGDPYPSAW--GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLR 74
+D P+ + P G W +G K GS VSIF + A+ KRL+
Sbjct: 10 RDFPFELSPEPPEGGPPGPWILHRGRKKATGSAVSIFVYDVKPGAEEQTQVAKAAFKRLK 69
Query: 75 TVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGL 134
T+RHPNILA+ ID T+ ++IVTE V PL +K G +++ +WGL
Sbjct: 70 TLRHPNILAY--------IDGLETEKCLHIVTEAVTPLGTYLKARAEAGGLKEQELSWGL 121
Query: 135 NQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYA 194
+QI KA+SFL NDC L+H NVC+++V V + +WKL D + GN GP +
Sbjct: 122 HQIVKALSFLVNDCNLIHNNVCMAAVFVDRAGEWKLGGLDYMYSAQGNG---GGPPSKGI 178
Query: 195 WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTASIPK 254
+ QY P ELA S AVR+ WS D W LGCLI+E+F+G L + LRN IPK
Sbjct: 179 PEL-EQYDPPELADSSSRAVREK--WSADMWRLGCLIWEVFNGS-LPRAAALRNPGKIPK 234
Query: 255 SLLPDYQRLLSSMPSRRLNSSKLIENSE----YFQNKLVDTIHFMEILNLKDSVEKDTFF 310
SL+ Y L+ + P R N ++ ++N + N+ V+T F+E + +K+ EK FF
Sbjct: 235 SLVTHYCELVGANPKVRPNPARFLQNCRAPGGFMSNRFVETNLFLEEIQIKEPAEKQKFF 294
Query: 311 RKLPNLAEQLPRQIVXXXXXXXXXXXXEFGSAAAPALTALLKMGSWLSTEEFSVKVLPTI 370
++L + P EFG+A A LT L K+G L EE+ K++P +
Sbjct: 295 QELSKSLDSFPEDFCRHKVLPQLLTAFEFGNAGAVVLTPLFKVGKSLRAEEYQEKIIPVV 354
Query: 371 VKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLV 430
VK+F+S DRA+R+ LLQ ++Q+ Q V+ Q++PHV GF DT+ +RE T+KSML+
Sbjct: 355 VKMFSSTDRAMRIRLLQQMEQFIQYLDEPTVNTQIFPHVTHGFLDTNPAIREQTVKSMLL 414
Query: 431 LAPKLSQRTISGSLLKYLSKLQV-DEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTV 489
LAPKL++ ++ L+K+ ++LQ D++ IR NTT+ LG I S+L+ TR RVL +AF+
Sbjct: 415 LAPKLNEANLNVELMKHFARLQAKDDQGPIRCNTTVCLGKIGSYLSASTRHRVLTSAFS- 473
Query: 490 RALRDTFSPARGAAKILSY 508
RA +D F+P+R A +L +
Sbjct: 474 RATKDPFAPSR-VAGVLGF 491
|
|
| UNIPROTKB|E2QUV4 SCYL1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 893 (319.4 bits), Expect = 8.9e-94, Sum P(2) = 8.9e-94
Identities = 196/499 (39%), Positives = 285/499 (57%)
Query: 17 KDLPYNIGDPYPSAW--GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLR 74
+D P+ + P G W +G K GSPVSIF D A+ KRL+
Sbjct: 10 RDFPFELSPDPPEGGPPGPWVLHRGRKKATGSPVSIFVYDVKPGADEQTQVAKAAFKRLK 69
Query: 75 TVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGL 134
T+RHPNILA+ ID T +++VTE V PL +KE G ++ +WGL
Sbjct: 70 TLRHPNILAY--------IDGLETDKCLHVVTEAVTPLGMYLKERAEAGGLKELELSWGL 121
Query: 135 NQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYA 194
+QI KA+SFL NDC L+H N+C+++V V + +WKL D + GN GP +
Sbjct: 122 HQIVKALSFLVNDCSLIHNNICMAAVFVDRAGEWKLGGLDYMYSAQGNG---GGPPRKGV 178
Query: 195 WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTASIPK 254
+ QY P ELA AVR+ WS D W LGCLI+E+F+G L + LRN IPK
Sbjct: 179 PEL-EQYDPPELADGSGRAVREK--WSADMWRLGCLIWEVFNGP-LPRAAALRNPGKIPK 234
Query: 255 SLLPDYQRLLSSMPSRRLNSSKLIENSE----YFQNKLVDTIHFMEILNLKDSVEKDTFF 310
SL+P Y L+ + P R N ++ ++N + N+ V+T F+E + +K+ EK FF
Sbjct: 235 SLVPHYCELVGANPKVRPNPARFLQNCRAPGGFMNNRFVETNLFLEEIQIKEPAEKQKFF 294
Query: 311 RKLPNLAEQLPRQIVXXXXXXXXXXXXEFGSAAAPALTALLKMGSWLSTEEFSVKVLPTI 370
++L + P EFG+A A LT L K+G +L+ EE+ K++P +
Sbjct: 295 QELSKSLDSFPEDFCRHRVLPQLLTAFEFGNAGAVVLTPLFKVGKFLNAEEYQQKIIPVV 354
Query: 371 VKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLV 430
VK+F+S DRA+R+ LLQ ++Q+ Q V+ Q++PHV GF DT+ +RE T+KSML+
Sbjct: 355 VKMFSSTDRAMRIRLLQQMEQFIQYLDEPTVNTQIFPHVVHGFLDTNPAIREQTVKSMLL 414
Query: 431 LAPKLSQRTISGSLLKYLSKLQV-DEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTV 489
LAPKL++ ++ L+K+ ++LQ DE+ IR NTT+ LG I S+LN TR RVL +AF+
Sbjct: 415 LAPKLNEANLNVELMKHFARLQAKDEQGPIRCNTTVCLGKIGSYLNASTRHRVLTSAFS- 473
Query: 490 RALRDTFSPARGAAKILSY 508
RA +D F+P+R A +L +
Sbjct: 474 RATKDPFAPSR-VAGVLGF 491
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 771 | |||
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 5e-10 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 1e-06 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 8e-06 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 8e-06 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 2e-04 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 2e-04 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 9e-04 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 0.002 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 59.6 bits (145), Expect = 5e-10
Identities = 48/247 (19%), Positives = 98/247 (39%), Gaps = 45/247 (18%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
+ K G V+I I L ++ L+ + HPNI+
Sbjct: 10 YLARDKKTGKKVAIKIIK-KEDSSSLLEELLREIEILKKLNHPNIVKL--------YGVF 60
Query: 97 STKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGN 154
+ +Y+V E L + +KE EG ++ L QI + + +L++ ++H +
Sbjct: 61 EDENHLYLVMEYCEGGSLKDLLKEN--EGKLSEDEILRILLQILEGLEYLHS-NGIIHRD 117
Query: 155 VCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVG-AQYKPVELAKSDWTA 213
+ ++++ + K+ L++F G ++ +VG Y E+
Sbjct: 118 LKPENILLDSD-NGKV----KLADF-GLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYY 171
Query: 214 VRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTASIPKSLLPDYQRLLSSMPSRRLN 273
KS D W LG ++YEL EL++ L+ +++L P +R +
Sbjct: 172 SEKS-----DIWSLGVILYEL---------PELKD-------LI---RKMLQKDPEKRPS 207
Query: 274 SSKLIEN 280
+ +++E+
Sbjct: 208 AKEILEH 214
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 50.3 bits (121), Expect = 1e-06
Identities = 44/273 (16%), Positives = 102/273 (37%), Gaps = 53/273 (19%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
++ K G V++ + + + AR ++ LR + HPNI+ + + E ++
Sbjct: 16 YKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLIDAFEDKD---- 71
Query: 97 STKITIYIVTE--PVMPLSEKIKELG-LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHG 153
+Y+V E L + + G L + + QI + + +L++ ++H
Sbjct: 72 ----HLYLVMEYCEGGDLFDYLSRGGPLSEDEAKKI----ALQILRGLEYLHS-NGIIHR 122
Query: 154 NVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVG-AQYKPVELAKSDWT 212
++ ++++ + K+ F + + ++ + VG Y E+
Sbjct: 123 DLKPENILLDENGVVKIADFGLAKKLLKSSSSLTT-------FVGTPWYMAPEV------ 169
Query: 213 AVRKSPPWS--IDSWGLGCLIYELFSG---------------MRLSKTEELRNTASIPKS 255
+ + +D W LG ++YEL +G +R L S
Sbjct: 170 -LLGGNGYGPKVDVWSLGVILYELLTGKPPFSGENILDQLQLIRRILGPPLEFDEPKWSS 228
Query: 256 LLPDYQRLLSSM----PSRRLNSSKLIENSEYF 284
+ + L+ PS+R + +++ +F
Sbjct: 229 GSEEAKDLIKKCLNKDPSKRPTAEEIL-QHPWF 260
|
Length = 260 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 47.5 bits (114), Expect = 8e-06
Identities = 45/248 (18%), Positives = 84/248 (33%), Gaps = 61/248 (24%)
Query: 59 QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVM--PLSEKI 116
+K L+ ++HPNI+ E E+ +Y+V E L + +
Sbjct: 37 IKKDRERILREIKILKKLKHPNIVRLYDVFEDED--------KLYLVMEYCEGGDLFDLL 88
Query: 117 KELGLEGSQRDE----YYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172
K+ G + E +Y QI A+ +L + +VH ++ ++++ + KL
Sbjct: 89 KKRG----RLSEDEARFYLR---QILSALEYL-HSKGIVHRDLKPENILLDEDGHVKLAD 140
Query: 173 FDVLSEFDGNNEAANGPM--LQYA---WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGL 227
F L+ E + +Y L+G Y D W L
Sbjct: 141 FG-LARQLDPGEKLTTFVGTPEYMAPEVLLGKGYGK----AVDI-------------WSL 182
Query: 228 GCLIYELFSGMRL-----SKTEELRNTASIPKSLLPDYQR-------LLSSM----PSRR 271
G ++YEL +G E + P L+ + P +R
Sbjct: 183 GVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWDISPEAKDLIRKLLVKDPEKR 242
Query: 272 LNSSKLIE 279
L + + ++
Sbjct: 243 LTAEEALQ 250
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 47.9 bits (115), Expect = 8e-06
Identities = 64/271 (23%), Positives = 108/271 (39%), Gaps = 65/271 (23%)
Query: 40 TSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99
K DG + I +N + A N VK L+ + HPNI+ + ++ K
Sbjct: 20 RRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKY--------YESFEEK 71
Query: 100 ITIYIVTEPVM--PLSEKIKELGLEGS--QRDEYYAWGLNQIAKAVSFLNNDCKLVH--- 152
+ IV E LS+KIK+ EG ++ W Q+ A+ +L++ K++H
Sbjct: 72 GKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDW-FVQLCLALKYLHSR-KILHRDI 129
Query: 153 --GNVCLSS--VVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVG-AQYKPVELA 207
N+ L+S +V KL F + + A +VG Y EL
Sbjct: 130 KPQNIFLTSNGLV-------KLGDFGISKVLSSTVDLAKT-------VVGTPYYLSPELC 175
Query: 208 KSDWTAVRKSPPWS--IDSWGLGCLIYEL------FSGMRLSKTEELRN------TASIP 253
++ P++ D W LGC++YEL F G EL IP
Sbjct: 176 QNK--------PYNYKSDIWSLGCVLYELCTLKHPFEG---ENLLELALKILKGQYPPIP 224
Query: 254 KSLLPDYQRLLSSM----PSRRLNSSKLIEN 280
+ + L+SS+ P R + ++++++
Sbjct: 225 SQYSSELRNLVSSLLQKDPEERPSIAQILQS 255
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 44.3 bits (103), Expect = 2e-04
Identities = 61/341 (17%), Positives = 110/341 (32%), Gaps = 26/341 (7%)
Query: 73 LRTVRHP-NILAFLHSTEVENIDATSTKITIYIVTEPVM--PLSEKIKELGLEGSQRDEY 129
L ++ HP NI+ + E ++Y+V E V L + +K++G +G +
Sbjct: 51 LASLNHPPNIVKLYDFFQDEG--------SLYLVMEYVDGGSLEDLLKKIGRKGPLSESE 102
Query: 130 YAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDW-KLHAFDVLSEFDGNNEAANG 188
+ L QI A+ +L+ ++H ++ ++++ + KL F + ++
Sbjct: 103 ALFILAQILSALEYLH-SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSI 161
Query: 189 PMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-ELR 247
P L + Y E+ S D W LG +YEL +G+ + E
Sbjct: 162 PALPSTSVGTPGYMAPEVLLG---LSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSS 218
Query: 248 NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKLVDTIHFMEILNLKDSVEKD 307
T+ K +L L+S S S+ KL+ + + S
Sbjct: 219 ATSQTLKIILELPTPSLASPLSPSNPELISKAASD-LLKKLLAKDPKNRLSS--SSDLSH 275
Query: 308 TFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLSTEEFSVKVL 367
L L + PL S A +L +L GS
Sbjct: 276 DLLAHLKLKESDLSDLLKPDDSAPLRLSLPPSLEALISSLNSLAISGS------DLKLDD 329
Query: 368 PTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPH 408
K A N + + S + +
Sbjct: 330 SNFSKELAPNGVSSSPHNSSSLLLSTASSKRSSLPKISARS 370
|
Length = 384 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 2e-04
Identities = 61/296 (20%), Positives = 99/296 (33%), Gaps = 73/296 (24%)
Query: 70 VKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPV-----MPLSEKIKELGLEGS 124
VK LR +RH NI+ +A K +Y+V E V L L +
Sbjct: 51 VKVLRQLRHENIVNLK--------EAFRRKGRLYLVFEYVERTLLELLEASPGGLPPDAV 102
Query: 125 QRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNE 184
+ Y W Q+ +A+++ ++ ++H ++ +++V+++ KL F
Sbjct: 103 RS---YIW---QLLQAIAYCHSH-NIIHRDIKPENILVSESGVLKLCDFGFARALRARPA 155
Query: 185 AANGPMLQYA---WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL- 240
+ P+ Y W Y+ EL D P +D W +GC++ EL G L
Sbjct: 156 S---PLTDYVATRW-----YRAPELLVGD---TNYGKP--VDVWAIGCIMAELLDGEPLF 202
Query: 241 ---SKTEELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKLVDTIHFMEI 297
S ++L L P +Q L SS P R E S+
Sbjct: 203 PGDSDIDQLYLIQKCLGPLPPSHQELFSSNP--RFAGVAFPEPSQ--------------- 245
Query: 298 LNLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKM 353
P E+ V L L + L LL+
Sbjct: 246 ----------------PESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 9e-04
Identities = 51/234 (21%), Positives = 93/234 (39%), Gaps = 43/234 (18%)
Query: 66 ARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTE--PVMPLSEKIKELGLEG 123
A N ++ L +V HPNI+++ + N + IV E P LS+ I + +
Sbjct: 46 AVNEIRILASVNHPNIISYKEAFLDGNK--------LCIVMEYAPFGDLSKAISKRKKKR 97
Query: 124 SQRDEYYAWG-LNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGN 182
E W Q+ + + L+ + K++H ++ +++++ K+ +
Sbjct: 98 KLIPEQEIWRIFIQLLRGLQALH-EQKILHRDLKSANILLVANDLVKIGDLGI------- 149
Query: 183 NEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSI--DSWGLGCLIYELFSG--- 237
++ M + +G P +A W K P+S D W LGCL+YE+ +
Sbjct: 150 SKVLKKNMAKTQ--IGT---PHYMAPEVW----KGRPYSYKSDIWSLGCLLYEMATFAPP 200
Query: 238 MRLSKTEELRNTA------SIPKSLLPDYQRLLSSM----PSRRLNSSKLIENS 281
++LR IP D Q + SM P R N K++ +
Sbjct: 201 FEARSMQDLRYKVQRGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASP 254
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 0.002
Identities = 43/213 (20%), Positives = 78/213 (36%), Gaps = 45/213 (21%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
++ K G V+I I +G A +K L+ + HPNI+ L D
Sbjct: 16 YKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLL--------DVF 67
Query: 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQ-RDEYYAWGLNQIAKAVSFLNNDCKLVHGN 154
K +Y+V E + L + IK+ + + Y + Q+ + ++F ++ ++H +
Sbjct: 68 RHKGDLYLVFEFMDTDLYKLIKDRQRGLPESLIKSYLY---QLLQGLAFCHSH-GILHRD 123
Query: 155 VCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYA---W------LVGA-QYKPV 204
+ ++++ KL F + F P Y W L+G Y
Sbjct: 124 LKPENLLINTEGVLKLADFGLARSFGSP----VRPYTHYVVTRWYRAPELLLGDKGYST- 178
Query: 205 ELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG 237
+D W +GC+ EL S
Sbjct: 179 ----------------PVDIWSVGCIFAELLSR 195
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 771 | |||
| KOG1243 | 690 | consensus Protein kinase [General function predict | 100.0 | |
| KOG2137 | 700 | consensus Protein kinase [Signal transduction mech | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 99.98 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 99.98 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 99.98 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 99.98 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 99.98 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 99.98 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 99.98 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 99.98 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 99.98 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 99.98 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 99.98 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 99.98 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 99.98 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 99.98 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 99.98 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 99.98 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 99.98 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 99.98 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 99.98 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 99.98 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 99.98 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 99.98 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 99.98 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 99.97 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 99.97 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 99.97 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 99.97 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 99.97 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 99.97 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 99.97 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 99.97 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 99.97 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 99.97 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 99.97 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 99.97 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 99.97 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 99.97 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 99.97 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 99.97 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 99.97 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 99.97 | |
| PTZ00284 | 467 | protein kinase; Provisional | 99.97 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 99.97 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 99.97 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 99.97 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 99.97 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 99.97 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 99.97 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 99.97 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 99.97 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 99.97 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 99.97 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 99.97 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 99.97 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 99.97 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 99.97 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 99.97 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 99.97 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 99.97 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 99.97 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 99.97 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 99.97 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 99.97 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 99.97 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.97 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 99.97 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 99.97 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 99.97 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 99.97 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 99.97 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 99.97 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 99.97 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 99.97 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 99.97 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 99.97 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 99.97 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 99.97 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 99.97 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 99.97 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 99.97 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 99.97 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 99.97 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 99.97 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 99.97 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 99.97 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 99.97 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 99.97 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 99.97 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 99.97 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 99.97 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 99.97 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 99.97 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 99.97 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.97 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 99.97 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 99.97 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 99.97 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 99.97 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 99.97 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 99.97 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 99.97 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 99.97 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.97 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 99.97 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 99.97 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 99.97 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 99.97 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.97 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 99.97 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 99.97 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 99.97 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 99.97 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 99.97 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 99.97 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.97 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.97 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 99.97 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 99.97 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 99.97 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 99.97 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.97 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 99.97 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 99.97 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 99.97 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 99.97 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 99.97 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 99.97 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.97 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 99.97 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 99.97 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 99.97 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.96 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 99.96 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 99.96 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 99.96 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 99.96 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 99.96 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 99.96 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 99.96 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 99.96 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.96 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 99.96 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 99.96 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 99.96 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.96 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.96 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 99.96 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 99.96 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 99.96 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.96 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 99.96 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 99.96 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 99.96 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.96 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 99.96 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 99.96 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 99.96 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 99.96 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 99.96 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 99.96 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 99.96 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 99.96 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 99.96 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 99.96 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 99.96 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 99.96 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.96 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 99.96 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 99.96 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 99.96 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 99.96 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 99.96 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 99.96 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 99.96 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 99.96 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.96 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 99.96 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 99.96 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 99.96 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 99.96 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 99.96 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 99.96 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 99.96 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 99.96 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 99.96 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 99.96 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.96 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 99.96 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 99.96 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 99.96 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 99.96 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 99.96 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 99.96 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 99.96 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 99.96 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 99.96 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 99.96 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.96 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 99.96 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 99.96 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.96 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 99.96 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 99.95 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 99.95 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 99.95 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 99.95 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.95 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 99.95 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 99.95 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 99.95 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 99.95 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 99.95 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.95 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.95 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 99.95 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 99.95 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.94 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.94 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 99.94 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.94 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.94 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 99.94 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.94 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 99.94 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 99.94 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.94 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 99.94 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.94 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.94 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.94 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.94 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.93 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 99.93 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.93 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.93 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 99.93 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.93 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 99.93 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 99.92 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.92 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 99.92 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.92 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.92 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.91 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.91 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 99.91 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 99.91 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.91 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.9 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 99.9 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.9 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.89 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 99.87 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.87 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 99.87 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.85 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.84 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.84 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.8 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.78 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.75 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.74 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.72 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.72 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.71 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.7 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.66 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.66 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.64 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.59 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.57 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.56 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.56 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.53 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.5 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.5 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.49 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.45 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.43 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.43 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.43 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.42 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.4 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.35 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.34 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.33 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.2 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.2 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.17 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.04 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.02 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 98.97 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 98.92 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 98.85 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 98.73 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 98.7 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 98.69 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 98.49 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 98.45 | |
| PF06293 | 206 | Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; | 98.45 | |
| KOG0211 | 759 | consensus Protein phosphatase 2A regulatory subuni | 98.45 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 98.4 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 98.39 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 98.38 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 98.27 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 98.24 | |
| COG4248 | 637 | Uncharacterized protein with protein kinase and he | 98.17 | |
| KOG0211 | 759 | consensus Protein phosphatase 2A regulatory subuni | 98.16 | |
| KOG2137 | 700 | consensus Protein kinase [Signal transduction mech | 98.16 | |
| PRK09902 | 216 | hypothetical protein; Provisional | 98.09 | |
| COG1718 | 268 | RIO1 Serine/threonine protein kinase involved in c | 97.93 | |
| COG0661 | 517 | AarF Predicted unusual protein kinase [General fun | 97.68 | |
| KOG1235 | 538 | consensus Predicted unusual protein kinase [Genera | 97.65 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 97.59 | |
| PRK09687 | 280 | putative lyase; Provisional | 97.56 | |
| PRK09687 | 280 | putative lyase; Provisional | 97.48 | |
| PF06176 | 229 | WaaY: Lipopolysaccharide core biosynthesis protein | 97.47 | |
| PTZ00429 | 746 | beta-adaptin; Provisional | 97.47 | |
| PF12717 | 178 | Cnd1: non-SMC mitotic condensation complex subunit | 97.46 | |
| PF12348 | 228 | CLASP_N: CLASP N terminal; InterPro: IPR024395 Thi | 97.45 | |
| PF01602 | 526 | Adaptin_N: Adaptin N terminal region; InterPro: IP | 97.34 | |
| KOG2270 | 520 | consensus Serine/threonine protein kinase involved | 97.33 | |
| TIGR02172 | 226 | Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou | 97.22 | |
| PF12755 | 97 | Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region | 97.03 | |
| PF12348 | 228 | CLASP_N: CLASP N terminal; InterPro: IPR024395 Thi | 97.03 | |
| cd05150 | 244 | APH Aminoglycoside 3'-phosphotransferase (APH). Th | 97.02 | |
| PRK13800 | 897 | putative oxidoreductase/HEAT repeat-containing pro | 96.84 | |
| PRK13800 | 897 | putative oxidoreductase/HEAT repeat-containing pro | 96.77 | |
| PF01636 | 239 | APH: Phosphotransferase enzyme family This family | 96.77 | |
| cd00020 | 120 | ARM Armadillo/beta-catenin-like repeats. An approx | 96.69 | |
| KOG1820 | 815 | consensus Microtubule-associated protein [Cytoskel | 96.62 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 96.46 | |
| COG2112 | 201 | Predicted Ser/Thr protein kinase [Signal transduct | 96.41 | |
| PRK09550 | 401 | mtnK methylthioribose kinase; Reviewed | 96.28 | |
| cd05155 | 235 | APH_ChoK_like_1 Uncharacterized bacterial proteins | 96.25 | |
| PF02985 | 31 | HEAT: HEAT repeat; InterPro: IPR000357 The HEAT re | 96.24 | |
| PF12755 | 97 | Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region | 96.24 | |
| PF12260 | 188 | PIP49_C: Protein-kinase domain of FAM69; InterPro: | 96.23 | |
| PF10508 | 503 | Proteasom_PSMB: Proteasome non-ATPase 26S subunit; | 96.21 | |
| PF13646 | 88 | HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2I | 96.2 | |
| COG5096 | 757 | Vesicle coat complex, various subunits [Intracellu | 96.17 | |
| KOG2268 | 465 | consensus Serine/threonine protein kinase [Signal | 96.16 | |
| TIGR01767 | 370 | MTRK 5-methylthioribose kinase. This enzyme is inv | 96.15 | |
| PRK12396 | 409 | 5-methylribose kinase; Reviewed | 96.13 | |
| cd05157 | 235 | ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. | 96.11 | |
| KOG1967 | 1030 | consensus DNA repair/transcription protein Mms19 [ | 96.1 | |
| PF01602 | 526 | Adaptin_N: Adaptin N terminal region; InterPro: IP | 96.05 | |
| PTZ00429 | 746 | beta-adaptin; Provisional | 96.05 | |
| KOG1820 | 815 | consensus Microtubule-associated protein [Cytoskel | 96.04 | |
| cd00020 | 120 | ARM Armadillo/beta-catenin-like repeats. An approx | 95.9 | |
| KOG0213 | 1172 | consensus Splicing factor 3b, subunit 1 [RNA proce | 95.9 | |
| PF10707 | 199 | YrbL-PhoP_reg: PhoP regulatory network protein Yrb | 95.88 |
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-97 Score=819.94 Aligned_cols=519 Identities=46% Similarity=0.754 Sum_probs=461.8
Q ss_pred CCCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 15 GVKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 15 ~~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
...+|+|+| +...-++ ++|. .|+.|.++.+|+||+++.++. .....++++++.||+||||||++|++.++.+.
T Consensus 9 ~~~~fpY~l-e~~~~~~~a~~~--~~t~k~~~~~vsVF~~~~~~~--~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~- 82 (690)
T KOG1243|consen 9 SSSQFPYDL-EETAFSSEALWP--DGTRKADGGPVSVFVYKRSNG--EVTELAKRAVKRLKTLRHPNILSYLDTTEEEG- 82 (690)
T ss_pred ccccCCccc-ccccCCCccccc--ccceeccCCceEEEEEeCCCc--hhhHHHHHHHHHhhhccCchhhhhhhhhcccC-
Confidence 347999999 4444333 5554 799999999999999997655 56778999999999999999999999999853
Q ss_pred CcCCcccEEEEEecCCcchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 94 DATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
++|||||+|.||..++++.+ ..++.||++||+.||.|||++|+++||||+.++|||++.|+|||+||
T Consensus 83 -------~~ylvTErV~Pl~~~lk~l~------~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggl 149 (690)
T KOG1243|consen 83 -------TLYLVTERVRPLETVLKELG------KEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGL 149 (690)
T ss_pred -------ceEEEeeccccHHHHHHHhH------HHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeee
Confidence 89999999999999999875 66799999999999999999999999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhccCCCC
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTASIP 253 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~~~~IP 253 (771)
++++...+.+. ..++.+.. ..|..|+.+.. ..+..|+|.|||+++|+|+| .+-...++.....||
T Consensus 150 e~v~~~~~~~~-----~~~~~~~~-~s~~~P~~~~~--------s~~s~D~~~Lg~li~el~ng-~~~~~~~~~~~~~ip 214 (690)
T KOG1243|consen 150 ELVSKASGFNA-----PAKSLYLI-ESFDDPEEIDP--------SEWSIDSWGLGCLIEELFNG-SLLTKTDLSNTGKIP 214 (690)
T ss_pred EEEeccccCCc-----ccccchhh-hcccChhhcCc--------cccchhhhhHHHHHHHHhCc-ccCcchhhhccCccc
Confidence 99988776432 11111122 14566665432 22679999999999999999 556677888899999
Q ss_pred cchHHHHHHHhccCCCCCCChHHHhhC----CCCCcchhhhhhhhhhhhccCChhhHHhhhhhchhhhcCCChhhhhhhh
Q 004157 254 KSLLPDYQRLLSSMPSRRLNSSKLIEN----SEYFQNKLVDTIHFMEILNLKDSVEKDTFFRKLPNLAEQLPRQIVLKKL 329 (771)
Q Consensus 254 ~~l~~~i~~lL~~~P~~Rps~~~lL~~----~~fF~n~lv~~~~~L~~l~~k~~~eK~~F~~~L~~~l~~fP~~~~~~kI 329 (771)
+.....+++.+-..+..|++...++.. ++||+|.++.++.||+++.+|+.+||..||++|.+.++.||++++++||
T Consensus 215 k~~~~~~~k~~~~~~~~r~n~~~~~~~~~~~~gff~n~fvd~~~fLeel~lks~~eK~~Ff~~L~~~l~~~pe~i~~~kv 294 (690)
T KOG1243|consen 215 KALIELYCKKLGATELKRPNKLRFILECRLLGGFFRNDFVDTLLFLEELRLKSVEEKQKFFSGLIDRLDNFPEEIIASKV 294 (690)
T ss_pred hhHHHHHHHHhccccccccchhhHHHHHHhccccccchHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 999999999888999999997766553 5899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCchhhHHHHHhccCCChhhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHH
Q 004157 330 LPLLASALEFGSAAAPALTALLKMGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHV 409 (771)
Q Consensus 330 LP~Ll~~~~~~~~~~~~L~~ll~i~~~l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l 409 (771)
+|.|+..++++.+...+|.|+|++++.++.++|++.|.|+|++||+++||+||+.||+|++.|+++|++++++++|||+|
T Consensus 295 lp~Ll~~~~~g~a~~~~ltpl~k~~k~ld~~eyq~~i~p~l~kLF~~~Dr~iR~~LL~~i~~~i~~Lt~~~~~d~I~phv 374 (690)
T KOG1243|consen 295 LPILLAALEFGDAASDFLTPLFKLGKDLDEEEYQVRIIPVLLKLFKSPDRQIRLLLLQYIEKYIDHLTKQILNDQIFPHV 374 (690)
T ss_pred HHHHHHHhhccccchhhhhHHHHhhhhccccccccchhhhHHHHhcCcchHHHHHHHHhHHHHhhhcCHHhhcchhHHHH
Confidence 99999999999989999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHH
Q 004157 410 ATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTV 489 (771)
Q Consensus 410 ~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~ 489 (771)
..||.|+++.|||+|||+|+.++|||+++++|+||||+|+++|.|++++|||||+||||||++||....|+.||+.||+
T Consensus 375 ~~G~~DTn~~Lre~Tlksm~~La~kL~~~~Ln~Ellr~~ar~q~d~~~~irtntticlgki~~~l~~~~R~~vL~~aft- 453 (690)
T KOG1243|consen 375 ALGFLDTNATLREQTLKSMAVLAPKLSKRNLNGELLRYLARLQPDEHGGIRTNTTICLGKIAPHLAASVRKRVLASAFT- 453 (690)
T ss_pred HhhcccCCHHHHHHHHHHHHHHHhhhchhhhcHHHHHHHHhhCccccCcccccceeeecccccccchhhhccccchhhh-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCcchhhheeee-----cc--------------------CCHHHHHHHHHHHHHHHHHHHHHH-hhcCCCCCCCC
Q 004157 490 RALRDTFSPARGAAKIL-----SY--------------------LNCDVRSKAFQAVDQFLQIVKQYH-EKTNTGDATGA 543 (771)
Q Consensus 490 ~~lkD~f~~~R~a~l~a-----~~--------------------~~~~VR~~a~~~~~~~l~~l~~~~-~~~~~~~~~~~ 543 (771)
|+|||||+|+|.|++.+ +| +++.||++||++++.|++++|+.+ +.+..+..+++
T Consensus 454 ralkdpf~paR~a~v~~l~at~~~~~~~~va~kIlp~l~pl~vd~e~~vr~~a~~~i~~fl~kl~~~~~~~~~~ge~~~s 533 (690)
T KOG1243|consen 454 RALKDPFVPARKAGVLALAATQEYFDQSEVANKILPSLVPLTVDPEKTVRDTAEKAIRQFLEKLEKVSPESTEAGEKAAS 533 (690)
T ss_pred hhhcCCCCCchhhhhHHHhhcccccchhhhhhhccccccccccCcccchhhHHHHHHHHHHhhhhhhccccccccceecc
Confidence 99999999999999999 33 899999999999999999999996 44544443321
Q ss_pred CccCCCCCCCcchhHHHHHHhhccCCCC
Q 004157 544 SSVGISSMPGNASLLGWAMSSLTLKGKP 571 (771)
Q Consensus 544 ~~~~~~~~~~~~~~~~wa~~~~~~~~~~ 571 (771)
+....++...|+||++++++.||++
T Consensus 534 ---~~~~~~~~~~~a~Wa~t~~s~~f~~ 558 (690)
T KOG1243|consen 534 ---PVKNHPAEPVWAGWALTSLSAKFKP 558 (690)
T ss_pred ---ccccCCccccccccchhhhhccccC
Confidence 1111234456999999999999998
|
|
| >KOG2137 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-43 Score=394.77 Aligned_cols=431 Identities=21% Similarity=0.335 Sum_probs=355.2
Q ss_pred CCCCCceecCCCCCCC--CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 16 VKDLPYNIGDPYPSAW--GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~--g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
...-.|++.+.++..+ +.|.+|.|+.+..+.+.-.+..- +..+++...-+.+||| .+
T Consensus 34 ~~~~~~~~~~~~~~~g~g~~~~ly~~~~~~sk~~~~~~s~~--------~~~ld~~~~~~~~lr~------~~------- 92 (700)
T KOG2137|consen 34 KESQSYRSLNQVGSAGPGDAWKLYAGKKSGSKAPTLKKSAV--------VWMLDKRASSLQQLRG------LD------- 92 (700)
T ss_pred ccccccccccceeecCCCchhhhhhhhccCccCccccceee--------eeecChhhhHHHHHhc------cc-------
Confidence 3445788888887755 78999999988776655211111 1112223344556666 11
Q ss_pred CcCCcccEEEEEecCCcchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 94 DATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
.+...||-. -..+.+++.||.|+|+++++||+||.|++|+++..|.|||+||
T Consensus 93 -------~vs~aTe~~---------------------f~nl~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf 144 (700)
T KOG2137|consen 93 -------GVSKATEDG---------------------FANLGNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGF 144 (700)
T ss_pred -------chhhcccHh---------------------hhhhhcccchhhhhccCcceeecccchhheeeccCcceeeccc
Confidence 233344422 1114566689999999999999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccC------CCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCC-CCCChh--
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVG------AQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM-RLSKTE-- 244 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~------~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~-~p~~~~-- 244 (771)
+++....+... .++..|....+ ..|.+||++.+ ...+.++|+|||||+||.+++|+ .++...
T Consensus 145 ~f~v~~~~~~~---~p~~~yd~~lp~~~~~~~~f~apE~~~~------~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~ 215 (700)
T KOG2137|consen 145 SFCVNANGPTE---YPFSEYDPPLPLLLQPHLNFLAPEYLLG------TTNTPASDVFSLGVLIYTIYNGGKSIIAANGG 215 (700)
T ss_pred hhhhccCCCCc---cccccCCCCCChhhccCcccccchhhcc------ccccccccceeeeeEEEEEecCCcchhhccCC
Confidence 99987665322 22333322222 27999999887 35668999999999999999654 333211
Q ss_pred --------------hhhccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcchhhhhhhhhhhhccCChhhHHhhh
Q 004157 245 --------------ELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKLVDTIHFMEILNLKDSVEKDTFF 310 (771)
Q Consensus 245 --------------~l~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n~lv~~~~~L~~l~~k~~~eK~~F~ 310 (771)
....-.+||.++.+.++++++.++..||++..++. .+||++..+.+++||+.+..|++.||.+|+
T Consensus 216 ~~~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~~-~~ff~D~~~~aLrfLD~l~~kdn~qKs~Fl 294 (700)
T KOG2137|consen 216 LLSYSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLLLS-IPFFSDPGLKALRFLDDLPQKDNSQKSSFL 294 (700)
T ss_pred cchhhhhhcccccccccccccCcHHHHHHHHHHhcCCcccCcchhhhhc-ccccCCchhhhhhhcccccccCcHHHHHHH
Confidence 00112579999999999999999999997766554 599999999999999999999999999999
Q ss_pred hhchhhhcCCChhhhhhhhHHHHHHHHhcCCCCchhhHHHHHhccCCChhhhhhhhHHHHHHhhcCCcH-HHHHHHHHhH
Q 004157 311 RKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLSTEEFSVKVLPTIVKLFASNDR-AIRVALLQHI 389 (771)
Q Consensus 311 ~~L~~~l~~fP~~~~~~kILP~Ll~~~~~~~~~~~~L~~ll~i~~~l~~eef~~~i~P~i~~lF~~~Dr-~iR~~LL~~l 389 (771)
+.|.++++.||.++..+||||.|++++......+.+|+.++.|++.++..+|..+++|.|.++|..++. ++++++++|+
T Consensus 295 k~Ls~~ip~fp~rv~~~kiLP~L~~el~n~~~vp~~LP~v~~i~~~~s~~~~~~~~~p~l~pi~~~~~~~~~~l~i~e~m 374 (700)
T KOG2137|consen 295 KGLSKLIPTFPARVLFQKILPTLVAELVNTKMVPIVLPLVLLIAEGLSQNEFGPKMLPALKPIYSASDPKQALLFILENM 374 (700)
T ss_pred HHHHHhhccCCHHHHHHhhhhHHHHHhccccccccccchhhhhhhccchhhhhhhhhHHHHHHhccCCcccchhhHHhhH
Confidence 999999999999999999999999999988888889999999999999999999999999999997665 8999999999
Q ss_pred HHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHHHHHHhhccC-CCCcchhhHHHHHH
Q 004157 390 DQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVD-EEPAIRTNTTILLG 468 (771)
Q Consensus 390 ~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL~~laklq~D-~~~~IRtnt~icl~ 468 (771)
+.+.++++++++.++|+|.|+..++|.+..|+|.+|+.++.++..|+...+++.|||.|..+... +...||+|++.||+
T Consensus 375 dlL~~Kt~~e~~~~~IlplL~~S~~~~~~~iQ~~~L~~lptv~e~iD~~~vk~~ilP~l~~l~~~tt~~~vkvn~L~c~~ 454 (700)
T KOG2137|consen 375 DLLKEKTPPEEVKEKILPLLYRSLEDSDVQIQELALQILPTVAESIDVPFVKQAILPRLKNLAFKTTNLYVKVNVLPCLA 454 (700)
T ss_pred HHHHhhCChHHHHHHHHHHHHHHhcCcchhhHHHHHHhhhHHHHhccHHHHHHHHHHHhhcchhcccchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999875 57999999999999
Q ss_pred HhhhccCcchhhHHhHHHHHHhh-hcCCCcchhhheeee
Q 004157 469 NIASHLNEGTRKRVLINAFTVRA-LRDTFSPARGAAKIL 506 (771)
Q Consensus 469 kia~~L~~~~~~~vL~~af~~~~-lkD~f~~~R~a~l~a 506 (771)
++++.|++.+....++|.+. .. .+||-+-.+...|+.
T Consensus 455 ~l~q~lD~~~v~d~~lpi~~-~~~~~dp~iv~~~~~i~~ 492 (700)
T KOG2137|consen 455 GLIQRLDKAAVLDELLPILK-CIKTRDPAIVMGFLRIYE 492 (700)
T ss_pred HHHHHHHHHHhHHHHHHHHH-HhcCCCcHHHHHHHHHHH
Confidence 99999999988888899988 55 889988888777766
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-41 Score=339.61 Aligned_cols=242 Identities=20% Similarity=0.284 Sum_probs=201.7
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|+...++|+|+ | +||++++|++|+-||||+|..+..+....+.+.+|++.||+|+|||++.++++|..
T Consensus 3 kYE~LgkvGEGSYG--vV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrr-------- 72 (396)
T KOG0593|consen 3 KYEKLGKVGEGSYG--VVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRR-------- 72 (396)
T ss_pred HHhhhhccccCcce--EEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHh--------
Confidence 588888999998 9 99999999999999999998776666778889999999999999999999999976
Q ss_pred ccEEEEEecCCc-chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
+..+|+|+|||. .+.+.|.+.... ...+.++.+++|++.|+.|||. +++|||||||+||+|+.+|.+|||||||++
T Consensus 73 krklhLVFE~~dhTvL~eLe~~p~G--~~~~~vk~~l~Q~l~ai~~cHk-~n~IHRDIKPENILit~~gvvKLCDFGFAR 149 (396)
T KOG0593|consen 73 KRKLHLVFEYCDHTVLHELERYPNG--VPSELVKKYLYQLLKAIHFCHK-NNCIHRDIKPENILITQNGVVKLCDFGFAR 149 (396)
T ss_pred cceeEEEeeecchHHHHHHHhccCC--CCHHHHHHHHHHHHHHhhhhhh-cCeecccCChhheEEecCCcEEeccchhhH
Confidence 458999999994 555556654422 3345577889999999999996 899999999999999999999999999999
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-hhc--------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-LRN-------- 248 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-l~~-------- 248 (771)
.+...+. + ...++.+..|+|||++.++ ..|+..+|||++||++.||++|.++|.... +.+
T Consensus 150 ~L~~pgd-----~-YTDYVATRWYRaPELLvGD-----tqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktL 218 (396)
T KOG0593|consen 150 TLSAPGD-----N-YTDYVATRWYRAPELLVGD-----TQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTL 218 (396)
T ss_pred hhcCCcc-----h-hhhhhhhhhccChhhhccc-----CcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHH
Confidence 8875321 1 2345777899999999986 578899999999999999999999885421 100
Q ss_pred ----------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 249 ----------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 249 ----------------------------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
...+...+.++++.||..||.+|++.++++.| +||++
T Consensus 219 G~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H-~yFd~ 289 (396)
T KOG0593|consen 219 GNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH-PYFDG 289 (396)
T ss_pred cccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcC-hHHHH
Confidence 01233347788999999999999999999988 78843
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-40 Score=361.42 Aligned_cols=245 Identities=20% Similarity=0.341 Sum_probs=206.9
Q ss_pred CCCCceecCCCCCCCCceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
.+-+|+.++.+|.|+ .-++|.+++..+|+.||+|++.++.. +....+.+.+||++.+.|+|||||+++++||+.
T Consensus 16 ~~~~Y~~g~~LGkGg-FA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs---- 90 (592)
T KOG0575|consen 16 RSKRYKRGRFLGKGG-FARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDS---- 90 (592)
T ss_pred CcceeeeeeeeccCc-ceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecC----
Confidence 346799999999996 33999999999999999999997533 235577889999999999999999999999974
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
+++|||.|+| ++|..+++++....+.. ..++++||+.||.|||+ .+|+|||||..|+|++++-++|||||
T Consensus 91 ----~nVYivLELC~~~sL~el~Krrk~ltEpE---ary~l~QIv~GlkYLH~-~~IiHRDLKLGNlfL~~~~~VKIgDF 162 (592)
T KOG0575|consen 91 ----NNVYIVLELCHRGSLMELLKRRKPLTEPE---ARYFLRQIVEGLKYLHS-LGIIHRDLKLGNLFLNENMNVKIGDF 162 (592)
T ss_pred ----CceEEEEEecCCccHHHHHHhcCCCCcHH---HHHHHHHHHHHHHHHHh-cCceecccchhheeecCcCcEEeccc
Confidence 5999999999 68999998765443333 45569999999999997 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhcc----
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT---- 249 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~~---- 249 (771)
|++......++ ...+.++++.|.|||++.. .+.++.+||||+||+||.|+.|.|||+...++.+
T Consensus 163 GLAt~le~~~E------rk~TlCGTPNYIAPEVl~k------~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~I 230 (592)
T KOG0575|consen 163 GLATQLEYDGE------RKKTLCGTPNYIAPEVLNK------SGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKI 230 (592)
T ss_pred ceeeeecCccc------ccceecCCCcccChhHhcc------CCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHH
Confidence 99999875432 1344566779999999985 5788999999999999999999999998765543
Q ss_pred ----C----CCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcch
Q 004157 250 ----A----SIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNK 287 (771)
Q Consensus 250 ----~----~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n~ 287 (771)
+ .+.....++|.+||+.+|.+||+++++|.| .||.+-
T Consensus 231 k~~~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h-~Ff~~g 275 (592)
T KOG0575|consen 231 KLNEYSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH-PFFKSG 275 (592)
T ss_pred HhcCcccccccCHHHHHHHHHHhcCCcccCCCHHHHhcC-HhhhCC
Confidence 3 344557789999999999999999999998 677443
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-40 Score=345.42 Aligned_cols=245 Identities=20% Similarity=0.254 Sum_probs=198.6
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-----hHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-----GHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-----~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
-|.+.+.+|+|+ | .|-.|..+.+|+.||||++++..... ......++|+++|++|.||||++++++|+.++
T Consensus 173 ~yii~~~LGsGafg--~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d- 249 (475)
T KOG0615|consen 173 YYIISKTLGSGAFG--LVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD- 249 (475)
T ss_pred eeEeeeeecCCcee--EEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC-
Confidence 488999999998 8 99999999999999999999753222 11233679999999999999999999999753
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCC---CcE
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT---LDW 168 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~---G~~ 168 (771)
+.|||+||| |.|.+.+-.++...+... +.+++|++.||.|||+ .||+||||||+||+++.+ ..+
T Consensus 250 -------s~YmVlE~v~GGeLfd~vv~nk~l~ed~~---K~~f~Qll~avkYLH~-~GI~HRDiKPeNILl~~~~e~~ll 318 (475)
T KOG0615|consen 250 -------SSYMVLEYVEGGELFDKVVANKYLREDLG---KLLFKQLLTAVKYLHS-QGIIHRDIKPENILLSNDAEDCLL 318 (475)
T ss_pred -------ceEEEEEEecCccHHHHHHhccccccchh---HHHHHHHHHHHHHHHH-cCcccccCCcceEEeccCCcceEE
Confidence 789999999 579998888776554444 4449999999999996 999999999999999877 669
Q ss_pred EEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh---
Q 004157 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE--- 245 (771)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~--- 245 (771)
||.|||++....... .....++++.|.|||++.+.-. ..++.++|+|||||++|-+++|.+||..+.
T Consensus 319 KItDFGlAK~~g~~s-------fm~TlCGTpsYvAPEVl~~kg~---~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~ 388 (475)
T KOG0615|consen 319 KITDFGLAKVSGEGS-------FMKTLCGTPSYVAPEVLASKGV---EYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP 388 (475)
T ss_pred Eecccchhhccccce-------ehhhhcCCccccChhheecCCe---ecccchheeeeccceEEEEeccCCCcccccCCc
Confidence 999999998775421 1234566779999999976422 244568999999999999999999996432
Q ss_pred -h-hc------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcchh
Q 004157 246 -L-RN------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKL 288 (771)
Q Consensus 246 -l-~~------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n~l 288 (771)
+ .+ -..|..+..+++.+||..||+.||+++++|+|+||...+.
T Consensus 389 sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~~ 445 (475)
T KOG0615|consen 389 SLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAPC 445 (475)
T ss_pred cHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhcccc
Confidence 1 11 1357788999999999999999999999999966554443
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=336.26 Aligned_cols=235 Identities=20% Similarity=0.307 Sum_probs=196.6
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
-+|.+.++||.|. + +||+|+++.++..||||.+.++.......+.+..|+++|+.|+|||||.++|+++.+
T Consensus 10 ~~y~~~~~iG~Gsfa--vVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~------ 81 (429)
T KOG0595|consen 10 GDYELSREIGSGSFA--VVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDD------ 81 (429)
T ss_pred ccceehhhccCcceE--EEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecC------
Confidence 4699999999998 8 999999999999999999998876666788899999999999999999999999974
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCC------CcEE
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT------LDWK 169 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~------G~~K 169 (771)
+++|+||||| ++|..+|+.++.. .+..++..+.||+.||+|||+ ++||||||||+||+++.. -..|
T Consensus 82 --~~i~lVMEyC~gGDLs~yi~~~~~l---~e~t~r~Fm~QLA~alq~L~~-~~IiHRDLKPQNiLLs~~~~~~~~~~LK 155 (429)
T KOG0595|consen 82 --DFIYLVMEYCNGGDLSDYIRRRGRL---PEATARHFMQQLASALQFLHE-NNIIHRDLKPQNILLSTTARNDTSPVLK 155 (429)
T ss_pred --CeEEEEEEeCCCCCHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeeeccCCcceEEeccCCCCCCCceEE
Confidence 4999999999 6899999998643 344466669999999999996 999999999999999875 3489
Q ss_pred EEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhcc
Q 004157 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT 249 (771)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~~ 249 (771)
|+|||+++.+.... .....++.+-|||||++.. +.|..++|+||+|+++|++++|.+||......++
T Consensus 156 IADFGfAR~L~~~~-------~a~tlcGSplYMAPEV~~~------~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL 222 (429)
T KOG0595|consen 156 IADFGFARFLQPGS-------MAETLCGSPLYMAPEVIMS------QQYDAKADLWSIGTILYQCLTGKPPFDAETPKEL 222 (429)
T ss_pred ecccchhhhCCchh-------HHHHhhCCccccCHHHHHh------ccccchhhHHHHHHHHHHHHhCCCCccccCHHHH
Confidence 99999999887421 1222344568999999975 5788999999999999999999999985443221
Q ss_pred ---------------CCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 250 ---------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 250 ---------------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
..+...+.+++..+|..++..|....+++.|
T Consensus 223 ~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~ 268 (429)
T KOG0595|consen 223 LLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDH 268 (429)
T ss_pred HHHHhccccccCchhhhccCchhhhhhHHHhcCccccCchHHhhhh
Confidence 1223346677888999999999998887776
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=340.85 Aligned_cols=245 Identities=19% Similarity=0.248 Sum_probs=205.0
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccC
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENID 94 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d 94 (771)
...+|++.+++|.|+ | .||+|+.+++|+.||||.+.++...-+..-. .+|++.|++|. |||||++.+++.+.+
T Consensus 8 ~m~RY~~i~klGDGTfG--sV~la~~~~~~~~VAIK~MK~Kf~s~ee~~n-LREvksL~kln~hpniikL~Evi~d~~-- 82 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFG--SVYLAKSKETGELVAIKKMKKKFYSWEECMN-LREVKSLRKLNPHPNIIKLKEVIRDND-- 82 (538)
T ss_pred HHHHHHHHHHhcCCcce--eEEEeeecCCCceeeHHHHHhhhccHHHHHH-HHHHHHHHhcCCCCcchhhHHHhhccC--
Confidence 356899999999999 9 9999999999999999999877655433333 46999999999 999999999997632
Q ss_pred cCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 95 ATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
.++||||||+ ..|+++++.++.. ..+..|.-+++||++||+|+|. .|+.||||||+||+|+....+||+||
T Consensus 83 -----~~L~fVfE~Md~NLYqLmK~R~r~--fse~~irnim~QilqGL~hiHk-~GfFHRDlKPENiLi~~~~~iKiaDF 154 (538)
T KOG0661|consen 83 -----RILYFVFEFMDCNLYQLMKDRNRL--FSESDIRNIMYQILQGLAHIHK-HGFFHRDLKPENILISGNDVIKIADF 154 (538)
T ss_pred -----ceEeeeHHhhhhhHHHHHhhcCCc--CCHHHHHHHHHHHHHHHHHHHh-cCcccccCChhheEecccceeEeccc
Confidence 3899999999 6899999988532 3455678889999999999996 99999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh----hhh--
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----ELR-- 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~----~l~-- 247 (771)
|+|+.+.+.. |+. .++.+..|+|||++... ..|+.++|||++||+++|+++-+++|.+. ++-
T Consensus 155 GLARev~Skp-----PYT--eYVSTRWYRAPEvLLrs-----~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KI 222 (538)
T KOG0661|consen 155 GLAREVRSKP-----PYT--EYVSTRWYRAPEVLLRS-----GYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKI 222 (538)
T ss_pred ccccccccCC-----Ccc--hhhhcccccchHHhhhc-----cccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHH
Confidence 9999987632 433 34667799999999865 57889999999999999999999888532 110
Q ss_pred ------------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcch
Q 004157 248 ------------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNK 287 (771)
Q Consensus 248 ------------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n~ 287 (771)
-+.+.+.+..+++.+||..||.+|||+.+.|+| +||+..
T Consensus 223 c~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~-pffq~~ 297 (538)
T KOG0661|consen 223 CEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH-PFFQVG 297 (538)
T ss_pred HHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC-cccccc
Confidence 012345678888999999999999999999998 788753
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-37 Score=324.31 Aligned_cols=235 Identities=17% Similarity=0.201 Sum_probs=197.1
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
..+....||.|. | +||++.++.+++-+|+|++... .+....+++.+|+++|+...||||++||+.|..+.
T Consensus 80 dle~~~~lG~G~gG--~V~kv~Hk~t~~i~AlK~I~~~-~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~------ 150 (364)
T KOG0581|consen 80 DLERLGVLGSGNGG--TVYKVRHKPTGKIYALKVILLN-IDPALQKQILRELEILRSCQSPYIVGFYGAFYSNG------ 150 (364)
T ss_pred HhhhhhhcccCCCc--EEEEEEEcCCCeEEEEEeeccc-CCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCC------
Confidence 455667899998 8 9999999999999999999543 44456778899999999999999999999999753
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..++|+|||| ++|..+++..+. ..+..+..+.++|++||.|||+..+||||||||+||+||..|++||||||.+
T Consensus 151 -~~isI~mEYMDgGSLd~~~k~~g~---i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS 226 (364)
T KOG0581|consen 151 -EEISICMEYMDGGSLDDILKRVGR---IPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVS 226 (364)
T ss_pred -ceEEeehhhcCCCCHHHHHhhcCC---CCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEecccccc
Confidence 1599999999 689999987643 3355677779999999999997689999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh-----h----hh
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-----E----LR 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~-----~----l~ 247 (771)
..+.++ ....++++..||+||.+.+ ..|+.++||||||+.|+|+..|+.|+... . +.
T Consensus 227 ~~lvnS--------~a~tfvGT~~YMsPERi~g------~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~ 292 (364)
T KOG0581|consen 227 GILVNS--------IANTFVGTSAYMSPERISG------ESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLC 292 (364)
T ss_pred HHhhhh--------hcccccccccccChhhhcC------CcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHH
Confidence 887653 2344566779999999998 47888999999999999999998776542 1 10
Q ss_pred -----ccCCC-----CcchHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 248 -----NTASI-----PKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 248 -----~~~~I-----P~~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
....+ ++++..++..||.++|.+|+++.++++|+
T Consensus 293 ~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hp 336 (364)
T KOG0581|consen 293 AIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHP 336 (364)
T ss_pred HHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCH
Confidence 11334 44599999999999999999999999993
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-38 Score=314.67 Aligned_cols=245 Identities=18% Similarity=0.271 Sum_probs=204.8
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|...+++|+|. | .||+|++..+|+.||||++...+..+..-..+.+|++.|+.|+||||+.++|+|-.
T Consensus 3 rY~~~~~lGEG~~g--vVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~-------- 72 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYG--VVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPH-------- 72 (318)
T ss_pred hhhhhhhhcCcceE--EEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccC--------
Confidence 688899999999 9 99999999999999999999887777777778899999999999999999999987
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
.+.+.||+||+ .+|...|+.....- ....|++++.++++||.|||. +.|+||||||.|++|+.+|.+||+|||+++
T Consensus 73 ~~~l~lVfEfm~tdLe~vIkd~~i~l--~pa~iK~y~~m~LkGl~y~H~-~~IlHRDlKPnNLLis~~g~lKiADFGLAr 149 (318)
T KOG0659|consen 73 KSNLSLVFEFMPTDLEVVIKDKNIIL--SPADIKSYMLMTLKGLAYCHS-KWILHRDLKPNNLLISSDGQLKIADFGLAR 149 (318)
T ss_pred CCceEEEEEeccccHHHHhccccccc--CHHHHHHHHHHHHHHHHHHHh-hhhhcccCCccceEEcCCCcEEeecccchh
Confidence 34899999999 68999998876432 234478889999999999996 899999999999999999999999999999
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-hhc--------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-LRN-------- 248 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-l~~-------- 248 (771)
.+...+.. ..+ .+.+..|+|||++.|. +.|+..+||||.||++.||+.+.|+|..+. +.+
T Consensus 150 ~f~~p~~~-----~~~-~V~TRWYRAPELLfGs-----r~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~L 218 (318)
T KOG0659|consen 150 FFGSPNRI-----QTH-QVVTRWYRAPELLFGS-----RQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRAL 218 (318)
T ss_pred ccCCCCcc-----ccc-ceeeeeccChHHhccc-----hhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHc
Confidence 88764321 122 2667799999999986 689999999999999999999998875321 110
Q ss_pred ----------c---------------------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcchh
Q 004157 249 ----------T---------------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKL 288 (771)
Q Consensus 249 ----------~---------------------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n~l 288 (771)
+ ...+.+..+++.+|+..||.+|+++.|.|+|..|.+.+.
T Consensus 219 GTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~ 289 (318)
T KOG0659|consen 219 GTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPL 289 (318)
T ss_pred CCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCC
Confidence 0 112345778899999999999999999999944434444
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-38 Score=342.62 Aligned_cols=240 Identities=22% Similarity=0.335 Sum_probs=205.2
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.+|-+.+.||+|. | .||+|++|.+.+.||||.+++....+..+..+++|+++++.|+||||+.++++||+.
T Consensus 2 e~yhv~e~iG~Gsfg--~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~------ 73 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFG--RVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETS------ 73 (808)
T ss_pred cchhHHHHhcCCccc--eeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhccc------
Confidence 3588899999999 8 999999999999999999999887777889999999999999999999999999984
Q ss_pred cccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
.++|+||||| ++|..+|...+...+ +.+..+.+|++.||.|||+ .+|+|||+||.||++...|.+||||||++
T Consensus 74 --~~~~vVte~a~g~L~~il~~d~~lpE---e~v~~~a~~LVsaL~yLhs-~rilhrd~kPqniLl~~~~~~KlcdFg~A 147 (808)
T KOG0597|consen 74 --AHLWVVTEYAVGDLFTILEQDGKLPE---EQVRAIAYDLVSALYYLHS-NRILHRDMKPQNILLEKGGTLKLCDFGLA 147 (808)
T ss_pred --ceEEEEehhhhhhHHHHHHhccCCCH---HHHHHHHHHHHHHHHHHHh-cCcccccCCcceeeecCCCceeechhhhh
Confidence 5999999999 789999988765443 3455559999999999996 99999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc--------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN-------- 248 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~-------- 248 (771)
+.+.... .+ ...-.+++.|||||+..+ +.|+..+|+|||||++||++.|+|||-...+.+
T Consensus 148 r~m~~~t-----~v-ltsikGtPlYmAPElv~e------~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d 215 (808)
T KOG0597|consen 148 RAMSTNT-----SV-LTSIKGTPLYMAPELVEE------QPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKD 215 (808)
T ss_pred hhcccCc-----ee-eeeccCcccccCHHHHcC------CCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcC
Confidence 9876521 11 112234558999999986 588899999999999999999999997654322
Q ss_pred ----cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 249 ----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 249 ----~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
...+...+.++++.||.+||.+|++..+++.| +|+.
T Consensus 216 ~v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H-pF~k 255 (808)
T KOG0597|consen 216 PVKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGH-PFWK 255 (808)
T ss_pred CCCCcccccHHHHHHHHHHhhcChhhcccHHHHhcC-hHHh
Confidence 23455678899999999999999999999998 4443
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=335.50 Aligned_cols=244 Identities=22% Similarity=0.352 Sum_probs=206.0
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
..|+..++||+|+ | .||+|++..+|+-||+|++...+.++.....+.+||++|++|.||||+++.+.+....
T Consensus 117 ~~feki~kIGeGTyg--~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~----- 189 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYG--QVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKL----- 189 (560)
T ss_pred HHHHHHHHhcCcchh--heeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecC-----
Confidence 3699999999999 9 9999999999999999999988877777888889999999999999999999987653
Q ss_pred cccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
...+|+|+||+ .+|.-++...... .....|+.++.||+.||.|||. .|++|||||.+|||||.+|..||+|||++
T Consensus 190 -~~siYlVFeYMdhDL~GLl~~p~vk--ft~~qIKc~mkQLl~Gl~~cH~-~gvlHRDIK~SNiLidn~G~LKiaDFGLA 265 (560)
T KOG0600|consen 190 -SGSIYLVFEYMDHDLSGLLSSPGVK--FTEPQIKCYMKQLLEGLEYCHS-RGVLHRDIKGSNILIDNNGVLKIADFGLA 265 (560)
T ss_pred -CceEEEEEecccchhhhhhcCCCcc--cChHHHHHHHHHHHHHHHHHhh-cCeeeccccccceEEcCCCCEEeccccce
Confidence 34899999999 5888887765322 1233477789999999999996 99999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh----hhhc----
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----ELRN---- 248 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~----~l~~---- 248 (771)
+.+...... + ....+++..|+|||++.+. ..|+.++|+||.|||+.|||.|+++++.. ++..
T Consensus 266 r~y~~~~~~---~--~T~rVvTLWYRpPELLLG~-----t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfkl 335 (560)
T KOG0600|consen 266 RFYTPSGSA---P--YTSRVVTLWYRPPELLLGA-----TSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKL 335 (560)
T ss_pred eeccCCCCc---c--cccceEEeeccChHHhcCC-----cccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHH
Confidence 987664321 1 2345677899999999987 68999999999999999999999987542 1110
Q ss_pred ---------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 249 ---------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 249 ---------------------------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
...+|....+++..||..||.+|.|+.+.|++ +||
T Consensus 336 cGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s-eyF 403 (560)
T KOG0600|consen 336 CGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS-EYF 403 (560)
T ss_pred hCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC-ccc
Confidence 13456778889999999999999999999987 666
|
|
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=324.42 Aligned_cols=246 Identities=20% Similarity=0.329 Sum_probs=201.9
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|...+.||.|. | .|..++++.+|+.||||++..........++..+|++.|+.++|+||+.++|.+.....+ .
T Consensus 23 ~y~~~~~iG~GAyG--vVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~---~ 97 (359)
T KOG0660|consen 23 YYVLIEPIGRGAYG--VVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRD---K 97 (359)
T ss_pred eecccccccCccee--eEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccc---c
Confidence 466678999999 8 899999999999999999985555556678888999999999999999999999762221 1
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
-+.+|+|+|++ .+|...|+.... ...+.+++.+|||++||+|+|+ ++++||||||.|+++|.+++.|+||||+++
T Consensus 98 f~DvYiV~elMetDL~~iik~~~~---L~d~H~q~f~YQiLrgLKyiHS-AnViHRDLKPsNll~n~~c~lKI~DFGLAR 173 (359)
T KOG0660|consen 98 FNDVYLVFELMETDLHQIIKSQQD---LTDDHAQYFLYQILRGLKYIHS-ANVIHRDLKPSNLLLNADCDLKICDFGLAR 173 (359)
T ss_pred cceeEEehhHHhhHHHHHHHcCcc---ccHHHHHHHHHHHHHhcchhhc-ccccccccchhheeeccCCCEEecccccee
Confidence 45899999999 579999988763 2345577789999999999997 999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----h-------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----L------- 246 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----l------- 246 (771)
..... ...+ ...+++.+..|+|||++... ..|+.++||||.||++.||++|+++|...+ +
T Consensus 174 ~~~~~--~~~~--~mTeYVaTRWYRAPElll~~-----~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~l 244 (359)
T KOG0660|consen 174 YLDKF--FEDG--FMTEYVATRWYRAPELLLNS-----SEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELL 244 (359)
T ss_pred ecccc--Cccc--chhcceeeeeecCHHHHhcc-----ccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhc
Confidence 88653 1111 12456778899999999764 688999999999999999999999885421 1
Q ss_pred --------------------hcc------------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 247 --------------------RNT------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 247 --------------------~~~------------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
++. .+......+++++||..||.+|+|+++.|.| +|+
T Consensus 245 GtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h-PYl 313 (359)
T KOG0660|consen 245 GTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH-PYL 313 (359)
T ss_pred CCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC-hhh
Confidence 111 2333457888999999999999999999999 444
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-37 Score=317.24 Aligned_cols=264 Identities=18% Similarity=0.268 Sum_probs=214.9
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|+...+|++|+ | .||+|+++.+++-||+|.+..+...+..--...+||.+|.+++||||+.+-+++.-.+
T Consensus 77 efe~lnrI~EGtyG--iVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~------ 148 (419)
T KOG0663|consen 77 EFEKLNRIEEGTYG--VVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSN------ 148 (419)
T ss_pred HHHHHhhcccCcce--eEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccc------
Confidence 589999999999 9 9999999999999999999987777666566778999999999999999999998655
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
-+.+||||||| .+|..+|...+. ......++..+.|+++||+|||. +.|+|||||++|++++..|.+|++|||+++
T Consensus 149 ~d~iy~VMe~~EhDLksl~d~m~q--~F~~~evK~L~~QlL~glk~lH~-~wilHRDLK~SNLLm~~~G~lKiaDFGLAR 225 (419)
T KOG0663|consen 149 MDKIYIVMEYVEHDLKSLMETMKQ--PFLPGEVKTLMLQLLRGLKHLHD-NWILHRDLKTSNLLLSHKGILKIADFGLAR 225 (419)
T ss_pred cceeeeeHHHHHhhHHHHHHhccC--CCchHHHHHHHHHHHHHHHHHhh-ceeEecccchhheeeccCCcEEecccchhh
Confidence 34899999999 589988887651 12233456669999999999995 999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCccccc-cccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh----hhhcc---
Q 004157 178 EFDGNNEAANGPMLQYA-WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----ELRNT--- 249 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~-~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~----~l~~~--- 249 (771)
.+.+ |...+. -+++..|+|||++.+. ..|+.++||||+||++.|++.+.|+|... ++..+
T Consensus 226 ~ygs-------p~k~~T~lVVTLWYRaPELLLG~-----~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~l 293 (419)
T KOG0663|consen 226 EYGS-------PLKPYTPLVVTLWYRAPELLLGA-----KTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKL 293 (419)
T ss_pred hhcC-------CcccCcceEEEeeecCHHHhcCC-----cccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHH
Confidence 9876 333333 3566799999999986 68899999999999999999999987532 11000
Q ss_pred -------------------------------------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcchhhhhh
Q 004157 250 -------------------------------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKLVDTI 292 (771)
Q Consensus 250 -------------------------------------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n~lv~~~ 292 (771)
..+...-.+++..||..||.+|.|+.+.|+|.+|-..++...-
T Consensus 294 lGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~p~~P 373 (419)
T KOG0663|consen 294 LGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPLPIDP 373 (419)
T ss_pred hCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCCCCCCh
Confidence 1133556788999999999999999999999544456666666
Q ss_pred hhhhhhccCChhhH
Q 004157 293 HFMEILNLKDSVEK 306 (771)
Q Consensus 293 ~~L~~l~~k~~~eK 306 (771)
.++-.++.|...++
T Consensus 374 ~~~Pt~P~k~~~~~ 387 (419)
T KOG0663|consen 374 SMFPTWPAKSEQQR 387 (419)
T ss_pred hhcCCCcccccccc
Confidence 66666666654443
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-37 Score=330.93 Aligned_cols=250 Identities=18% Similarity=0.297 Sum_probs=204.4
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccCc
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d~ 95 (771)
.+|.+|+.+|.|. + +|++|+.+.++..||||+++++-- ++...+.+..|-..|.+| .||+|++++..|.++.
T Consensus 73 ~DF~Fg~~lGeGSYS--tV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~--- 147 (604)
T KOG0592|consen 73 NDFKFGKILGEGSYS--TVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEE--- 147 (604)
T ss_pred hhcchhheeccccce--eEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeeccc---
Confidence 4699999999998 7 999999999999999999997532 223345667788888888 7999999999999854
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
.+|+|+||+ |+|.++|++.+... +...+++..||+.||+|||+ +|||||||||+||+++.+|.+||.||
T Consensus 148 -----sLYFvLe~A~nGdll~~i~K~Gsfd---e~caR~YAAeIldAleylH~-~GIIHRDlKPENILLd~dmhikITDF 218 (604)
T KOG0592|consen 148 -----SLYFVLEYAPNGDLLDLIKKYGSFD---ETCARFYAAEILDALEYLHS-NGIIHRDLKPENILLDKDGHIKITDF 218 (604)
T ss_pred -----ceEEEEEecCCCcHHHHHHHhCcch---HHHHHHHHHHHHHHHHHHHh-cCceeccCChhheeEcCCCcEEEeec
Confidence 899999999 78999999986543 33345669999999999996 99999999999999999999999999
Q ss_pred CcccccCCCCCCCCC---Ccc----ccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh
Q 004157 174 DVLSEFDGNNEAANG---PML----QYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~---~~~----~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l 246 (771)
|-+..+......... +.. ...++++..|.+||++..+ ..+..+|+|+|||++|.|+.|.+||.....
T Consensus 219 GsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~------~~~~~sDiWAlGCilyQmlaG~PPFra~Ne 292 (604)
T KOG0592|consen 219 GSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDS------PAGPSSDLWALGCILYQMLAGQPPFRAANE 292 (604)
T ss_pred cccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCC------CCCcccchHHHHHHHHHHhcCCCCCccccH
Confidence 999877654322111 111 1335666699999999873 567899999999999999999999975431
Q ss_pred ------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcchhh
Q 004157 247 ------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKLV 289 (771)
Q Consensus 247 ------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n~lv 289 (771)
.-...+|+...++++++|..+|..|+++.++-+| +||.+.-.
T Consensus 293 yliFqkI~~l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H-pFF~~Vdw 346 (604)
T KOG0592|consen 293 YLIFQKIQALDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH-PFFEGVDW 346 (604)
T ss_pred HHHHHHHHHhcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhC-cccccCCh
Confidence 1225678889999999999999999999998887 88877543
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=312.38 Aligned_cols=241 Identities=17% Similarity=0.217 Sum_probs=197.8
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
..|+|.++||.|. | +||++.+..+|..||.|.+.....+....+..-.|+.+|++|+||||+++++....++
T Consensus 19 ~~y~Il~~IG~GsFg--~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~----- 91 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFG--EVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIED----- 91 (375)
T ss_pred HHHHHHHHHcCCcch--heEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhcc-----
Confidence 3599999999999 9 9999999999999999999876666667788889999999999999999999433332
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCC-CcHHHHHHHHHHHHHHHHHHHc--CC-CceecCCCCCCEEEcCCCcEEEE
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGS-QRDEYYAWGLNQIAKAVSFLNN--DC-KLVHGNVCLSSVVVTQTLDWKLH 171 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~-~~~~~i~~gl~QI~~aL~fLH~--~~-~ivH~dIkp~NI~v~~~G~~KL~ 171 (771)
...+|||||+| ++|...|+..+.... ..+.+++.++.|++.||..+|+ +. -++||||||.|||++.+|.+|||
T Consensus 92 -~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLG 170 (375)
T KOG0591|consen 92 -NEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLG 170 (375)
T ss_pred -chhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeec
Confidence 34699999999 789999987553322 2345577779999999999997 22 38999999999999999999999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc---
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN--- 248 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~--- 248 (771)
|||+++.+... ......+++++.||+||.+.+ ..|..++|+|||||++|||+.-.+||....+-.
T Consensus 171 DfGL~r~l~s~------~tfA~S~VGTPyYMSPE~i~~------~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~ 238 (375)
T KOG0591|consen 171 DFGLGRFLSSK------TTFAHSLVGTPYYMSPERIHE------SGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCK 238 (375)
T ss_pred cchhHhHhcch------hHHHHhhcCCCcccCHHHHhc------CCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHH
Confidence 99999988753 222345677789999999987 588999999999999999999999987665322
Q ss_pred ------cCCCC-----cchHHHHHHHhccCCCCCCChHHHhh
Q 004157 249 ------TASIP-----KSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 249 ------~~~IP-----~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
...+| ..+..++..|+..||..||+...++.
T Consensus 239 KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~ 280 (375)
T KOG0591|consen 239 KIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQ 280 (375)
T ss_pred HHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHH
Confidence 23355 45888899999999999998644443
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=315.85 Aligned_cols=247 Identities=19% Similarity=0.256 Sum_probs=206.5
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
-.|++.+.||.|. + +||.|+.+..++.||||+++....++. +..+++|++.++.++||||++++.+|..+
T Consensus 26 ~~YeL~e~IG~G~sa--~V~~A~c~p~~e~VAIK~inLEkc~~~-ld~l~kE~~~msl~~HPNIv~~~~sFvv~------ 96 (516)
T KOG0582|consen 26 KDYELQEVIGVGASA--VVYLARCIPTNEVVAIKIINLEKCNND-LDALRKEVQTMSLIDHPNIVTYHCSFVVD------ 96 (516)
T ss_pred cceeEEEEEecccee--EeeeeeecccCCEEEEEEeehhhhhhh-HHHHHHHHHHhhhcCCCCcceEEEEEEec------
Confidence 3699999999998 6 999999999999999999998877665 78899999999999999999999999985
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+|+||.++ |++.+.|+..-..+ ..+..|+.+++++++||.|||. .|.||||||+.||+|+.+|.+||+|||.
T Consensus 97 --~~LWvVmpfMa~GS~ldIik~~~~~G-l~E~~Ia~iLre~LkaL~YLH~-~G~IHRdvKAgnILi~~dG~VkLadFgv 172 (516)
T KOG0582|consen 97 --SELWVVMPFMAGGSLLDIIKTYYPDG-LEEASIATILREVLKALDYLHQ-NGHIHRDVKAGNILIDSDGTVKLADFGV 172 (516)
T ss_pred --ceeEEeehhhcCCcHHHHHHHHcccc-ccHHHHHHHHHHHHHHHHHHHh-cCceecccccccEEEcCCCcEEEcCcee
Confidence 4899999999 78999998764433 3455688889999999999996 9999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccc-cccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh--------
Q 004157 176 LSEFDGNNEAANGPMLQ-YAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------- 246 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~-~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-------- 246 (771)
+..+...+.. .... ..+.+...|||||++...- .+|.+++||||||+...||.+|..||.....
T Consensus 173 sa~l~~~G~R---~~~rf~tfvgtp~wmAPEvl~q~~----~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tL 245 (516)
T KOG0582|consen 173 SASLFDSGDR---QVTRFNTFVGTPCWMAPEVLMQQL----HGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTL 245 (516)
T ss_pred eeeecccCce---eeEeeccccCcccccChHHhhhcc----cCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHh
Confidence 8877664321 1222 3345556999999954321 5889999999999999999999988854221
Q ss_pred --------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 247 --------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 247 --------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
.+....+++++.++..||..||.+||+++++|+| .||++
T Consensus 246 qn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh-~FFk~ 298 (516)
T KOG0582|consen 246 QNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH-AFFKK 298 (516)
T ss_pred cCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc-HHHhh
Confidence 1113455678899999999999999999999998 77754
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=311.56 Aligned_cols=246 Identities=18% Similarity=0.287 Sum_probs=202.5
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
-..|++.+.||.|+ | +||.++++++++-+|+|++.++...+ ......++|..+|.+++||.||+++..|++.
T Consensus 24 ~~dF~~lkviGkG~fG--kV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~---- 97 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFG--KVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTE---- 97 (357)
T ss_pred hhheeeeeeeeccCCc--eEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccC----
Confidence 34699999999997 7 99999999999999999999764333 3567788999999999999999999999974
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+|+|+||+ |.|..+|++.+... +...+.++..|+.||.|||+ .+||||||||+||+++.+|.++|+||
T Consensus 98 ----~kLylVld~~~GGeLf~hL~~eg~F~---E~~arfYlaEi~lAL~~LH~-~gIiyRDlKPENILLd~~GHi~LtDF 169 (357)
T KOG0598|consen 98 ----EKLYLVLDYLNGGELFYHLQREGRFS---EDRARFYLAEIVLALGYLHS-KGIIYRDLKPENILLDEQGHIKLTDF 169 (357)
T ss_pred ----CeEEEEEeccCCccHHHHHHhcCCcc---hhHHHHHHHHHHHHHHHHHh-CCeeeccCCHHHeeecCCCcEEEecc
Confidence 4999999999 57999999766433 33355669999999999997 99999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhcc----
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT---- 249 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~~---- 249 (771)
|+|......+.. ...++++..|||||++.. ..++.++|.||||+++|||++|.+||..++...+
T Consensus 170 gL~k~~~~~~~~------t~tfcGT~eYmAPEil~~------~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I 237 (357)
T KOG0598|consen 170 GLCKEDLKDGDA------TRTFCGTPEYMAPEILLG------KGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKI 237 (357)
T ss_pred ccchhcccCCCc------cccccCCccccChHHHhc------CCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHH
Confidence 999865543221 233566779999999987 5888999999999999999999999976653221
Q ss_pred --------CC-CCcchHHHHHHHhccCCCCCC----ChHHHhhCCCCCcchhhh
Q 004157 250 --------AS-IPKSLLPDYQRLLSSMPSRRL----NSSKLIENSEYFQNKLVD 290 (771)
Q Consensus 250 --------~~-IP~~l~~~i~~lL~~~P~~Rp----s~~~lL~~~~fF~n~lv~ 290 (771)
.. ++...++++++||..+|.+|. .+.++ +.++||...-.+
T Consensus 238 ~~~k~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~i-k~HpfF~~inW~ 290 (357)
T KOG0598|consen 238 LKGKLPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEI-KRHPFFKGINWE 290 (357)
T ss_pred hcCcCCCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHh-hcCcccccCCHH
Confidence 22 566789999999999999997 35554 444888764443
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-36 Score=327.86 Aligned_cols=238 Identities=18% Similarity=0.243 Sum_probs=205.3
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
+...|+.-++||+|. | .||.++.+.+++.|+||.++..... ..+.+.||+.+|+.++|+||+++++.|-..
T Consensus 271 P~~~y~~~~kigqgaSG--~vy~A~~~~~~~~VaiK~m~l~~Q~--~keLilnEi~Vm~~~~H~NiVnfl~Sylv~---- 342 (550)
T KOG0578|consen 271 PRSKYTDFKKIGQGATG--GVYVARKISTKQEVAIKRMDLRKQP--KKELLLNEILVMRDLHHPNIVNFLDSYLVG---- 342 (550)
T ss_pred hhhhhcchhhhcccccc--ceeeeeeccCCceEEEEEEEeccCC--chhhhHHHHHHHHhccchHHHHHHHHhccc----
Confidence 678899999999999 8 8999999999999999999976433 457899999999999999999999999873
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
+.+|+||||+ ++|.+.+....+. +..|+.++++++.||+|||. .+|+|||||.+||+++.+|.+||+||
T Consensus 343 ----deLWVVMEym~ggsLTDvVt~~~~~----E~qIA~Icre~l~aL~fLH~-~gIiHrDIKSDnILL~~~g~vKltDF 413 (550)
T KOG0578|consen 343 ----DELWVVMEYMEGGSLTDVVTKTRMT----EGQIAAICREILQGLKFLHA-RGIIHRDIKSDNILLTMDGSVKLTDF 413 (550)
T ss_pred ----ceeEEEEeecCCCchhhhhhccccc----HHHHHHHHHHHHHHHHHHHh-cceeeeccccceeEeccCCcEEEeee
Confidence 4899999999 5799988877643 44577889999999999997 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh-h-------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-E------- 245 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~-~------- 245 (771)
|||..+..... .+..-++++.|||||+... +.|+.++||||||++++||+-|.+||-.+ .
T Consensus 414 GFcaqi~~~~~------KR~TmVGTPYWMAPEVvtr------k~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLI 481 (550)
T KOG0578|consen 414 GFCAQISEEQS------KRSTMVGTPYWMAPEVVTR------KPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI 481 (550)
T ss_pred eeeeccccccC------ccccccCCCCccchhhhhh------cccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHH
Confidence 99998876432 2333455668999999876 58899999999999999999999887432 2
Q ss_pred -------hhccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 246 -------LRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 246 -------l~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
++....++..+.+++.+||..|+.+|+++.+||+| +||
T Consensus 482 a~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H-pFl 526 (550)
T KOG0578|consen 482 ATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH-PFL 526 (550)
T ss_pred hhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC-hhh
Confidence 23346678889999999999999999999999999 566
|
|
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-35 Score=307.37 Aligned_cols=250 Identities=20% Similarity=0.318 Sum_probs=203.9
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCC-eeEEeeeEEecccCcC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPN-ILAFLHSTEVENIDAT 96 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPn-Ilkv~d~~e~e~~d~~ 96 (771)
..|+..+++|+|+ | +||+|+.+.+|+-||+|++......+.....+.+|+-+|+.|+|+| |+.++|++.+++..+
T Consensus 11 ~~~~~~eklGeGtyg--~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~- 87 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYG--VVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHR- 87 (323)
T ss_pred HHHHHHHHhCCCCce--EEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccc-
Confidence 4588889999999 9 9999999999999999999987665556667889999999999999 999999998764211
Q ss_pred CcccEEEEEecCC-cchHHHHHHhCCC-CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV-MPLSEKIKELGLE-GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v-~~L~~~L~~~~~~-~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
....+|+|+||+ .+|..++...... .......|+..++||+.||.|||+ .+|+||||||+||+|+++|.+||+|||
T Consensus 88 -~~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~-~~IlHRDLKPQNlLi~~~G~lKlaDFG 165 (323)
T KOG0594|consen 88 -GIGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHS-HGILHRDLKPQNLLISSSGVLKLADFG 165 (323)
T ss_pred -ccceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHh-CCeecccCCcceEEECCCCcEeeeccc
Confidence 134899999999 7899999887642 122236788889999999999997 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccc-cccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----hhcc
Q 004157 175 VLSEFDGNNEAANGPMLQYA-WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LRNT 249 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~-~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----l~~~ 249 (771)
+++.+.- |+..+. .+++..|+|||++.+. ..|+..+||||+||+++||+++.++|.... +..+
T Consensus 166 lAra~~i-------p~~~yt~evvTlWYRaPEvLlGs-----~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~I 233 (323)
T KOG0594|consen 166 LARAFSI-------PMRTYTPEVVTLWYRAPEVLLGS-----TSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRI 233 (323)
T ss_pred hHHHhcC-------CcccccccEEEeeccCHHHhcCC-----CcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHH
Confidence 9986543 333333 2344589999999885 578899999999999999999999885421 1000
Q ss_pred -----------------------------------CCCC---cchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 250 -----------------------------------ASIP---KSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 250 -----------------------------------~~IP---~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
..+| .+..+++.+||..+|.+|.++...|+| +||+.
T Consensus 234 f~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h-~yf~~ 307 (323)
T KOG0594|consen 234 FRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH-PYFSE 307 (323)
T ss_pred HHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC-hhhcc
Confidence 0112 367788899999999999999999998 67754
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=327.73 Aligned_cols=238 Identities=18% Similarity=0.266 Sum_probs=203.8
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCC-CCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGT-NAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~-~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
-+|++|+.+|.|. | .|..|++..+|+.+|||++.+. ...+.....+.+|+-+||.|.||||+++||+|++
T Consensus 12 GpwkLgkTLG~Gstg--~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~------ 83 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTG--CVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWEN------ 83 (786)
T ss_pred cceeccccccCCCCc--eehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeecc------
Confidence 3799999999998 8 8999999999999999999976 4444556678899999999999999999999997
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
+.++|+|.||+ |.|.++|.+++...+. +. ...+.||+.|+.|||. .+|+|||+||+|++++..+++||+|||
T Consensus 84 --~~~lylvlEyv~gGELFdylv~kG~l~e~--ea-a~ff~QIi~gv~yCH~-~~icHRDLKpENlLLd~~~nIKIADFG 157 (786)
T KOG0588|consen 84 --KQHLYLVLEYVPGGELFDYLVRKGPLPER--EA-AHFFRQILDGVSYCHA-FNICHRDLKPENLLLDVKNNIKIADFG 157 (786)
T ss_pred --CceEEEEEEecCCchhHHHHHhhCCCCCH--HH-HHHHHHHHHHHHHHhh-hcceeccCCchhhhhhcccCEeeeccc
Confidence 56999999999 6799988877654332 22 2349999999999996 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhcc-----
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT----- 249 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~~----- 249 (771)
++..-... .++ -..++.+.|.+||++.+. ...+.++|+||+|+++|.|++|.-||+++.++.+
T Consensus 158 MAsLe~~g------klL-eTSCGSPHYA~PEIV~G~-----pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~ 225 (786)
T KOG0588|consen 158 MASLEVPG------KLL-ETSCGSPHYAAPEIVSGR-----PYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQ 225 (786)
T ss_pred eeecccCC------ccc-cccCCCcccCCchhhcCC-----CCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHH
Confidence 99754432 222 234566799999999985 5567899999999999999999999998876643
Q ss_pred -------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 250 -------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 250 -------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
..||.+.++++.+||..||.+|++.+++++|++
T Consensus 226 ~G~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~ 265 (786)
T KOG0588|consen 226 RGVFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPF 265 (786)
T ss_pred cCcccCCCcCCHHHHHHHHHHhccCccccccHHHHhhCch
Confidence 578889999999999999999999999999954
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-35 Score=321.76 Aligned_cols=243 Identities=22% Similarity=0.288 Sum_probs=198.0
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc---hhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ---DGHLAAARNGVKRLRTVR-HPNILAFLHSTEVEN 92 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~---~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~ 92 (771)
.-+|.+++.+|.|. | +|+.|.++.+|+.||||+++++... ....+.+++|+.++++++ ||||++++++++..+
T Consensus 16 ~g~y~~~~~lG~Gsfg--kV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 16 IGKYELGRTLGSGSFG--KVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cCceeeeeeecCCCCe--eEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 45799999999998 8 9999999999999999988875221 234567789999999999 999999999999853
Q ss_pred cCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCC-CcEE
Q 004157 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT-LDWK 169 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~-G~~K 169 (771)
.+||||||| +.|.++|.+.+...+ .....+++||+.|+.|||+ .||+||||||+||+++.+ +++|
T Consensus 94 --------~~~ivmEy~~gGdL~~~i~~~g~l~E---~~ar~~F~Qlisav~y~H~-~gi~HRDLK~ENilld~~~~~~K 161 (370)
T KOG0583|consen 94 --------KIYIVMEYCSGGDLFDYIVNKGRLKE---DEARKYFRQLISAVAYCHS-RGIVHRDLKPENILLDGNEGNLK 161 (370)
T ss_pred --------eEEEEEEecCCccHHHHHHHcCCCCh---HHHHHHHHHHHHHHHHHHh-CCEeeCCCCHHHEEecCCCCCEE
Confidence 799999999 479999988554333 3456669999999999997 899999999999999999 9999
Q ss_pred EEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh--
Q 004157 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-- 247 (771)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~-- 247 (771)
|+|||++....... -.....++.+.|+|||++.+.+. ..+.++|+||+|+++|.|++|..||......
T Consensus 162 l~DFG~s~~~~~~~------~~l~t~cGsp~Y~aPEvl~~~~~----Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l 231 (370)
T KOG0583|consen 162 LSDFGLSAISPGED------GLLKTFCGSPAYAAPEVLSGKGT----YSGKAADVWSLGVILYVLLCGRLPFDDSNVPNL 231 (370)
T ss_pred EeccccccccCCCC------CcccCCCCCcccCCHHHhCCCCC----cCCchhhhhhhHHHHHHHHhCCCCCCCccHHHH
Confidence 99999998773110 01223456679999999987421 2358999999999999999999999875522
Q ss_pred ------ccCCCCc-----chHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 ------NTASIPK-----SLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 ------~~~~IP~-----~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
....+|. .+..++.+||..+|.+|+++.+++.| +||+
T Consensus 232 ~~ki~~~~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h-~w~~ 279 (370)
T KOG0583|consen 232 YRKIRKGEFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILEH-PWFQ 279 (370)
T ss_pred HHHHhcCCccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhC-hhhc
Confidence 2234454 45889999999999999999999977 5554
|
|
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-34 Score=313.40 Aligned_cols=250 Identities=20% Similarity=0.289 Sum_probs=194.0
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.||.|+ | .||+|+++.+|..|+||++............+.+|++++++|+||||+++++++...+.. .
T Consensus 1 ry~i~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~---~ 75 (338)
T cd07859 1 RYKIQEVIGKGSYG--VVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRR---E 75 (338)
T ss_pred CeEEEEEEeecCCe--EEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCC---C
Confidence 599999999998 8 999999999999999999875433333445678899999999999999999988654321 1
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
...+|+||||| ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++.
T Consensus 76 ~~~~~lv~e~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~aL~~LH~-~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~ 151 (338)
T cd07859 76 FKDIYVVFELMESDLHQVIKANDD---LTPEHHQFFLYQLLRALKYIHT-ANVFHRDLKPKNILANADCKLKICDFGLAR 151 (338)
T ss_pred CceEEEEEecCCCCHHHHHHhccc---CCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeEECCCCcEEEccCcccc
Confidence 24689999999 578888876532 2344566779999999999996 899999999999999999999999999997
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-----------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----------- 246 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----------- 246 (771)
........ ........++..|+|||++.+.. ..++.++|+|||||++|+|++|.+||.....
T Consensus 152 ~~~~~~~~---~~~~~~~~~t~~y~aPE~~~~~~----~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~ 224 (338)
T cd07859 152 VAFNDTPT---AIFWTDYVATRWYRAPELCGSFF----SKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLL 224 (338)
T ss_pred ccccccCc---cccccCCCCCCCcCCHHHHhccc----cccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHh
Confidence 65332110 11111234456899999976421 2466789999999999999999988743211
Q ss_pred --------------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 247 --------------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 247 --------------------------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
.....++..+.+++.+||..+|.+||++.++++| +||++
T Consensus 225 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h-p~f~~ 295 (338)
T cd07859 225 GTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD-PYFKG 295 (338)
T ss_pred CCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC-chhhh
Confidence 0012456678899999999999999999999998 56643
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=309.00 Aligned_cols=245 Identities=18% Similarity=0.271 Sum_probs=198.5
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
....|+-.+.+|.|. | .||+|+..++++.||||+.-.... .-.+|+++|+.++||||++++.+|......
T Consensus 22 ~~i~~~~~~liG~GsFg--~Vyq~~~~e~~~~vAIKKv~~d~r------~knrEl~im~~l~HpNIV~L~~~f~~~~~~- 92 (364)
T KOG0658|consen 22 VEISYEAVRLIGSGSFG--VVYQAKLRETEEEVAIKKVLQDKR------YKNRELQIMRKLDHPNIVRLLYFFSSSTES- 92 (364)
T ss_pred eEEEEEeeEEEeecccc--eEEEEEEcCCCceeEEEEecCCCC------cCcHHHHHHHhcCCcCeeeEEEEEEecCCC-
Confidence 456789999999999 9 999999999999999999875321 234699999999999999999999764321
Q ss_pred CCcccEEEEEecCC-cchHHHHHHhCCCC-CCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCC-CcEEEEc
Q 004157 96 TSTKITIYIVTEPV-MPLSEKIKELGLEG-SQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT-LDWKLHA 172 (771)
Q Consensus 96 ~~~~~~iyIVtE~v-~~L~~~L~~~~~~~-~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~-G~~KL~d 172 (771)
..-+..+||||+ .+|.++++...... ......|+.+.+||++||.|||+ .+|+||||||.||+||.+ |..||||
T Consensus 93 --d~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~-~~IcHRDIKPqNlLvD~~tg~LKicD 169 (364)
T KOG0658|consen 93 --DEVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHS-HGICHRDIKPQNLLVDPDTGVLKICD 169 (364)
T ss_pred --chhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHh-cCcccCCCChheEEEcCCCCeEEecc
Confidence 023667999999 78999998642111 11223477779999999999997 999999999999999976 9999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----hh-
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LR- 247 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----l~- 247 (771)
||-+..+..... ...+.+...|+|||++.+. ..|+.++|+||.||++.||+-|+++|.+++ +.
T Consensus 170 FGSAK~L~~~ep-------niSYicSRyYRaPELifga-----~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~e 237 (364)
T KOG0658|consen 170 FGSAKVLVKGEP-------NISYICSRYYRAPELIFGA-----TEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVE 237 (364)
T ss_pred CCcceeeccCCC-------ceeEEEeccccCHHHHcCc-----cccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHH
Confidence 999988765322 2345778899999999986 789999999999999999999999986432 10
Q ss_pred ------------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 ------------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 ------------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....+|.+..+++.++|..+|.+|.++.+++.| +||+.
T Consensus 238 Iik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h-~fFde 311 (364)
T KOG0658|consen 238 IIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH-PFFDE 311 (364)
T ss_pred HHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc-hhhHH
Confidence 013567889999999999999999999999998 56643
|
|
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-34 Score=305.80 Aligned_cols=244 Identities=19% Similarity=0.277 Sum_probs=191.3
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
...+|++.+.||.|+ | +||+|+++.+|+.|+||++....... ....+.+|+++++.++||||++++++++.+
T Consensus 3 ~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---- 75 (303)
T cd07869 3 KADSYEKLEKLGEGSYA--TVYKGKSKVNGKLVALKVIRLQEEEG-TPFTAIREASLLKGLKHANIVLLHDIIHTK---- 75 (303)
T ss_pred ccccceEeeeEEecCCE--EEEEEEECCCCCEEEEEEeccccccc-cchhHHHHHHHHhhCCCCCcCeEEEEEecC----
Confidence 346799999999998 8 99999999999999999997543222 234567899999999999999999999863
Q ss_pred CCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 96 ~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 76 ----~~~~lv~e~~~~~l~~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~-~~ivH~dlkp~Nill~~~~~~kl~Dfg 148 (303)
T cd07869 76 ----ETLTLVFEYVHTDLCQYMDKHPG--GLHPENVKLFLFQLLRGLSYIHQ-RYILHRDLKPQNLLISDTGELKLADFG 148 (303)
T ss_pred ----CeEEEEEECCCcCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECCCCCEEECCCC
Confidence 4899999999 678887765431 12344567779999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-----hhc-
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-----LRN- 248 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-----l~~- 248 (771)
++......... ......+..|+|||++.+. ..++.++|+|||||++|+|++|..||.... +..
T Consensus 149 ~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~ 217 (303)
T cd07869 149 LARAKSVPSHT------YSNEVVTLWYRPPDVLLGS-----TEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERI 217 (303)
T ss_pred cceeccCCCcc------CCCCcccCCCCChHHHcCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHH
Confidence 98754332110 1112345589999997653 345678999999999999999998885310 000
Q ss_pred ---------------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 249 ---------------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 249 ---------------------------------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
...++..+.+++.+||+.+|.+|+|+.++++| +||++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h-~~f~~ 293 (303)
T cd07869 218 FLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH-EYFSD 293 (303)
T ss_pred HHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC-ccccc
Confidence 00123457789999999999999999999998 66665
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-34 Score=303.02 Aligned_cols=240 Identities=18% Similarity=0.260 Sum_probs=190.6
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.+|.|+ | +||+|+++.+++.|+||++......+...+.+.+|++++++++||||++++++++.+
T Consensus 2 ~y~~~~~lg~g~~~--~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------- 72 (287)
T cd07848 2 KFEVLGVVGEGAYG--VVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRR------- 72 (287)
T ss_pred CceEEEEecccCCE--EEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecC-------
Confidence 599999999998 8 999999999999999999986544445567788999999999999999999999864
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
..+|+||||+ +.+...+.... .......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++.
T Consensus 73 -~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~-~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~ 148 (287)
T cd07848 73 -GKLYLVFEYVEKNMLELLEEMP--NGVPPEKVRSYIYQLIKAIHWCHK-NDIVHRDIKPENLLISHNDVLKLCDFGFAR 148 (287)
T ss_pred -CEEEEEEecCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEEcCCCcEEEeeccCcc
Confidence 4899999999 44444444322 123344567779999999999996 899999999999999999999999999998
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h---c--
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R---N-- 248 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~---~-- 248 (771)
......... .....++..|+|||++.+ ..++.++|+|||||++|||++|.+||..... . .
T Consensus 149 ~~~~~~~~~-----~~~~~~~~~y~aPE~~~~------~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~ 217 (287)
T cd07848 149 NLSEGSNAN-----YTEYVATRWYRSPELLLG------APYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVL 217 (287)
T ss_pred ccccccccc-----ccccccccccCCcHHHcC------CCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhh
Confidence 764321110 111234558999999876 3567899999999999999999988853210 0 0
Q ss_pred -----------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCC
Q 004157 249 -----------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEY 283 (771)
Q Consensus 249 -----------------------------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~f 283 (771)
...++..+.+++++||+.+|.+||+++++++|++|
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 218 GPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred CCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 01255668899999999999999999999999543
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-35 Score=303.97 Aligned_cols=239 Identities=21% Similarity=0.295 Sum_probs=202.9
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
.+|+|.+.+|.|+ | +|-+|+....|+.||||.+.+..-.+ ..+-.+++|++++..|.||||+++|++||+
T Consensus 53 HRyE~~etLGkGTYG--KVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFEN------ 124 (668)
T KOG0611|consen 53 HRYEITETLGKGTYG--KVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFEN------ 124 (668)
T ss_pred hHHHHHHHhcCCccc--ceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcC------
Confidence 4799999999999 9 99999999999999999998765443 667889999999999999999999999997
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
++.+.|||||. +.|++++.+++...+.. ...+++||+.|+.|||. ++++|||||.+||+++.++++||+|||
T Consensus 125 --kdKIvivMEYaS~GeLYDYiSer~~LsErE---aRhfFRQIvSAVhYCHk-nrVvHRDLKLENILLD~N~NiKIADFG 198 (668)
T KOG0611|consen 125 --KDKIVIVMEYASGGELYDYISERGSLSERE---ARHFFRQIVSAVHYCHK-NRVVHRDLKLENILLDQNNNIKIADFG 198 (668)
T ss_pred --CceEEEEEEecCCccHHHHHHHhccccHHH---HHHHHHHHHHHHHHHhh-ccceecccchhheeecCCCCeeeeccc
Confidence 45899999999 68999999987554333 33449999999999995 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh----cc-
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----NT- 249 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~----~~- 249 (771)
++-.+.+.. +-..+++.+-|.+||++.+. ..-+..+|.||||+|+|.|..|..||+..+.+ ++
T Consensus 199 LSNly~~~k-------fLqTFCGSPLYASPEIvNG~-----PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs 266 (668)
T KOG0611|consen 199 LSNLYADKK-------FLQTFCGSPLYASPEIVNGT-----PYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQIS 266 (668)
T ss_pred hhhhhcccc-------HHHHhcCCcccCCccccCCC-----CCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhh
Confidence 987776532 12345666799999999874 33457899999999999999999999876543 22
Q ss_pred ------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 250 ------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 250 ------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
..-|....-+|+.||-.||.+|-|+.++-.| ||.
T Consensus 267 ~GaYrEP~~PSdA~gLIRwmLmVNP~RRATieDiAsH-WWv 306 (668)
T KOG0611|consen 267 RGAYREPETPSDASGLIRWMLMVNPERRATIEDIASH-WWV 306 (668)
T ss_pred cccccCCCCCchHHHHHHHHHhcCcccchhHHHHhhh-hee
Confidence 2457778889999999999999999999887 554
|
|
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=302.74 Aligned_cols=240 Identities=18% Similarity=0.260 Sum_probs=189.6
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
..|++.+.||.|+ | +||+|.++.++..|+||++...... .....+.+|+++++.|+||||+++++++..+
T Consensus 5 ~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------ 75 (288)
T cd07871 5 ETYVKLDKLGEGTYA--TVFKGRSKLTENLVALKEIRLEHEE-GAPCTAIREVSLLKNLKHANIVTLHDIIHTE------ 75 (288)
T ss_pred ccceEeeEEecCCCE--EEEEEEECCCCCEEEEEEecccccC-CcchhHHHHHHHHHhCCCCCEeeEEEEEcCC------
Confidence 4599999999998 8 9999999999999999999754322 2234567899999999999999999999764
Q ss_pred cccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+|+||||+ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 76 --~~~~lv~e~~~~~l~~~l~~~~~~--~~~~~~~~~~~qi~~aL~~LH~-~~ivH~dlkp~Nil~~~~~~~kl~DfG~~ 150 (288)
T cd07871 76 --RCLTLVFEYLDSDLKQYLDNCGNL--MSMHNVKIFMFQLLRGLSYCHK-RKILHRDLKPQNLLINEKGELKLADFGLA 150 (288)
T ss_pred --CeEEEEEeCCCcCHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEECCCCCEEECcCcce
Confidence 3899999999 6788888654321 2234456679999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh---------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--------- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~--------- 247 (771)
......... ......+..|+|||++.+. ..++.++|+|||||++|+|++|.+||......
T Consensus 151 ~~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~ 219 (288)
T cd07871 151 RAKSVPTKT------YSNEVVTLWYRPPDVLLGS-----TEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRL 219 (288)
T ss_pred eeccCCCcc------ccCceecccccChHHhcCC-----cccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 765432110 1112345589999998653 34677899999999999999999887432210
Q ss_pred ----------c-----------------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCC
Q 004157 248 ----------N-----------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEY 283 (771)
Q Consensus 248 ----------~-----------------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~f 283 (771)
. ...++....+++++||..+|.+|+|+.++++|++|
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 220 LGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred hCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 0 01245567889999999999999999999999543
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-34 Score=306.71 Aligned_cols=237 Identities=16% Similarity=0.195 Sum_probs=192.0
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
+|++.+.||.|+ | +||+|.++.+|+.|+||++...... ....+.+.+|++++++++||||+++++.+++.
T Consensus 2 ~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~------ 73 (291)
T cd05612 2 DLERIKTVGTGTFG--RVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQ------ 73 (291)
T ss_pred CceeeeeeecCCCe--EEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccC------
Confidence 599999999998 8 9999999999999999999754322 13456788999999999999999999998763
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
.++|+||||+ ++|.+++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~e~~~~~~L~~~~~~~~~~---~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~NIli~~~~~~kl~Dfg~ 147 (291)
T cd05612 74 --RFLYMLMEYVPGGELFSYLRNSGRF---SNSTGLFYASEIVCALEYLHS-KEIVYRDLKPENILLDKEGHIKLTDFGF 147 (291)
T ss_pred --CeEEEEEeCCCCCCHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeeecCCCHHHeEECCCCCEEEEecCc
Confidence 4899999999 5799998775432 233455669999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh--------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~-------- 247 (771)
+....... ....+...|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 148 ~~~~~~~~---------~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~ 212 (291)
T cd05612 148 AKKLRDRT---------WTLCGTPEYLAPEVIQS------KGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILA 212 (291)
T ss_pred chhccCCc---------ccccCChhhcCHHHHcC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence 87664311 11234458999999876 35678999999999999999999888543211
Q ss_pred ----ccCCCCcchHHHHHHHhccCCCCCCC-----hHHHhhCCCCCcc
Q 004157 248 ----NTASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENSEYFQN 286 (771)
Q Consensus 248 ----~~~~IP~~l~~~i~~lL~~~P~~Rps-----~~~lL~~~~fF~n 286 (771)
....++..+.+++++||..||.+|++ +.++++| +||..
T Consensus 213 ~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h-~~~~~ 259 (291)
T cd05612 213 GKLEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH-RWFKS 259 (291)
T ss_pred CCcCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC-ccccC
Confidence 11235667899999999999999995 9999998 55543
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-34 Score=312.04 Aligned_cols=240 Identities=16% Similarity=0.234 Sum_probs=194.5
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
.-..|++.+.||.|+ | +||+|+++.+|+.|+||++.+... .....+.+.+|+++|++++||||++++++++.+
T Consensus 16 ~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--- 90 (329)
T PTZ00263 16 KLSDFEMGETLGTGSFG--RVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDE--- 90 (329)
T ss_pred CchheEEEEEEEecCCe--EEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcC---
Confidence 345799999999998 8 999999999999999999975421 123456788999999999999999999999864
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
..+|+||||+ ++|.+++...... ....+.+++.||+.||.|||+ .+++||||||+||+++.+|.+||+|
T Consensus 91 -----~~~~lv~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~qi~~aL~~LH~-~~ivH~dlkp~NIll~~~~~~kl~D 161 (329)
T PTZ00263 91 -----NRVYFLLEFVVGGELFTHLRKAGRF---PNDVAKFYHAELVLAFEYLHS-KDIIYRDLKPENLLLDNKGHVKVTD 161 (329)
T ss_pred -----CEEEEEEcCCCCChHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeeecCCCHHHEEECCCCCEEEee
Confidence 4899999999 5798888775432 344566679999999999996 8999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----hc
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN 248 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~~ 248 (771)
||++....... ....++..|+|||++.+ ..++.++|+|||||++|+|++|..||..... ..
T Consensus 162 fg~~~~~~~~~---------~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~ 226 (329)
T PTZ00263 162 FGFAKKVPDRT---------FTLCGTPEYLAPEVIQS------KGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEK 226 (329)
T ss_pred ccCceEcCCCc---------ceecCChhhcCHHHHcC------CCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHH
Confidence 99998664321 11234458999999876 3567899999999999999999998854321 11
Q ss_pred --------cCCCCcchHHHHHHHhccCCCCCCC-----hHHHhhCCCCCcc
Q 004157 249 --------TASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENSEYFQN 286 (771)
Q Consensus 249 --------~~~IP~~l~~~i~~lL~~~P~~Rps-----~~~lL~~~~fF~n 286 (771)
...++..+.+++.+||+.+|.+|++ +.+++.| +||.+
T Consensus 227 i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h-p~f~~ 276 (329)
T PTZ00263 227 ILAGRLKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH-PYFHG 276 (329)
T ss_pred HhcCCcCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC-CccCC
Confidence 1235667889999999999999997 6899998 66654
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=306.55 Aligned_cols=257 Identities=16% Similarity=0.232 Sum_probs=207.7
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
-..|++...||.|+ | .||.|+.|.+|+.+|+|++.++..-. .+.+.++.|-.+|....+|+||++|..|.+
T Consensus 140 ~~DFe~Lk~IgkGAfG--eVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD----- 212 (550)
T KOG0605|consen 140 LDDFELLKVIGKGAFG--EVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQD----- 212 (550)
T ss_pred cccchhheeeccccce--eEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecC-----
Confidence 45799999999999 9 99999999999999999999875433 457778889999999999999999999987
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
+.++|+||||+ |++..+|.+.+.. .+++.+.++.+++.|+..||. .|+|||||||+|++|+..|.+||+||
T Consensus 213 ---~~~LYLiMEylPGGD~mTLL~~~~~L---~e~~arfYiaE~vlAI~~iH~-~gyIHRDIKPdNlLiD~~GHiKLSDF 285 (550)
T KOG0605|consen 213 ---KEYLYLIMEYLPGGDMMTLLMRKDTL---TEDWARFYIAETVLAIESIHQ-LGYIHRDIKPDNLLIDAKGHIKLSDF 285 (550)
T ss_pred ---CCeeEEEEEecCCccHHHHHHhcCcC---chHHHHHHHHHHHHHHHHHHH-cCcccccCChhheeecCCCCEeeccc
Confidence 45999999999 6899999887654 345567779999999999996 99999999999999999999999999
Q ss_pred CcccccCCCCC--------------------CCC---------------------CCccccccccCCCCCChhccccccc
Q 004157 174 DVLSEFDGNNE--------------------AAN---------------------GPMLQYAWLVGAQYKPVELAKSDWT 212 (771)
Q Consensus 174 gla~~~~~~~~--------------------~~~---------------------~~~~~~~~~~~~~Y~aPE~~~~~~~ 212 (771)
|+|..+..... ... ...+.+..++++.|+|||++.+
T Consensus 286 GLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~--- 362 (550)
T KOG0605|consen 286 GLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLG--- 362 (550)
T ss_pred cccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhc---
Confidence 99964322000 000 0111233456679999999988
Q ss_pred cccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhcc----------------CCCCcchHHHHHHHhccCCCCCCC---
Q 004157 213 AVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT----------------ASIPKSLLPDYQRLLSSMPSRRLN--- 273 (771)
Q Consensus 213 ~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~~----------------~~IP~~l~~~i~~lL~~~P~~Rps--- 273 (771)
++|+..+|.|||||+||||+.|.|||.+++...+ ..+..+..++|.+||. +|..|.-
T Consensus 363 ---kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G 438 (550)
T KOG0605|consen 363 ---KGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKG 438 (550)
T ss_pred ---CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCccc
Confidence 5789999999999999999999999976553221 3455678999999999 9999996
Q ss_pred hHHHhhCCCCCcchhhhhhhhhh
Q 004157 274 SSKLIENSEYFQNKLVDTIHFME 296 (771)
Q Consensus 274 ~~~lL~~~~fF~n~lv~~~~~L~ 296 (771)
++++-.| +||++.-.+.+....
T Consensus 439 ~~EIK~H-PfF~~v~W~~l~~~~ 460 (550)
T KOG0605|consen 439 AEEIKKH-PFFKGVDWDHLREMP 460 (550)
T ss_pred HHHHhcC-CccccCCcchhhcCC
Confidence 6777666 899876666555443
|
|
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-33 Score=295.48 Aligned_cols=241 Identities=18% Similarity=0.254 Sum_probs=192.3
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|++.+.||.|. | +||+|+++.+|..|+||++......+.....+.+|+.++++++||||+++++.++.+
T Consensus 1 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------- 71 (285)
T cd07861 1 DYTKIEKIGEGTYG--VVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQE------- 71 (285)
T ss_pred CceEeeEecccCce--EEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeC-------
Confidence 489999999997 7 999999999999999999976544444456788999999999999999999999863
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
..+|+||||+ ++|.+++.............+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||++.
T Consensus 72 -~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~-~~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 149 (285)
T cd07861 72 -SRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHS-RRVLHRDLKPQNLLIDNKGVIKLADFGLAR 149 (285)
T ss_pred -CeEEEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHh-CCeeecCCCHHHEEEcCCCcEEECccccee
Confidence 4899999999 6788887664432333455566779999999999996 899999999999999999999999999987
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-----------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----------- 246 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----------- 246 (771)
........ .........|+|||++.+. ..++.++|+|||||++|+|++|.++|.....
T Consensus 150 ~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~ 218 (285)
T cd07861 150 AFGIPVRV------YTHEVVTLWYRAPEVLLGS-----PRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRIL 218 (285)
T ss_pred ecCCCccc------ccCCcccccccChHHhcCC-----CCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHh
Confidence 55331110 1111334579999987653 2456789999999999999999988753210
Q ss_pred ------------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 247 ------------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 247 ------------------------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
.....++..+.+++++||..+|.+||++.++++|++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~ 284 (285)
T cd07861 219 GTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPY 284 (285)
T ss_pred CCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCC
Confidence 001246777889999999999999999999999854
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=300.28 Aligned_cols=246 Identities=18% Similarity=0.284 Sum_probs=194.6
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
...|..++.+|.|. | +||.++++.+|+.+|||........ ..+.+.+|+++|++|+|||||++++......
T Consensus 16 ~~~~~~~~~lG~Gs~G--~V~l~~~~~~g~~~AvK~v~~~~~~--~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~---- 87 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFG--SVYLATNKKTGELMAVKSVELEDSP--TSESLEREIRILSRLNHPNIVQYYGSSSSRE---- 87 (313)
T ss_pred cchhhhhccccCccce--EEEEEEecCCCcceeeeeeecccch--hHHHHHHHHHHHHhCCCCCEEeeCCcccccc----
Confidence 34689999999998 9 9999999999999999999875222 2677899999999999999999999744321
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC-CCcEEEEcc
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ-TLDWKLHAF 173 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~-~G~~KL~dF 173 (771)
...++|.|||+ ++|.+++++.+. ...+..++....||++||.|||+ .|+|||||||+||+++. +|.+||+||
T Consensus 88 --~~~~~i~mEy~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylHs-~g~vH~DiK~~NiLl~~~~~~~KlaDF 162 (313)
T KOG0198|consen 88 --NDEYNIFMEYAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLHS-KGIVHCDIKPANILLDPSNGDVKLADF 162 (313)
T ss_pred --CeeeEeeeeccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHh-CCEeccCcccceEEEeCCCCeEEeccC
Confidence 12699999999 689999998763 23355577779999999999996 99999999999999999 799999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh----h--h-
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----E--L- 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~----~--l- 246 (771)
|++......... ........++..|||||++..+ .....++|||||||++.||++|.+|+... . +
T Consensus 163 G~a~~~~~~~~~---~~~~~~~~Gtp~~maPEvi~~g-----~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ 234 (313)
T KOG0198|consen 163 GLAKKLESKGTK---SDSELSVQGTPNYMAPEVIRNG-----EVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLL 234 (313)
T ss_pred cccccccccccc---ccccccccCCccccCchhhcCC-----CcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHH
Confidence 999877641111 1112234556799999999852 12235899999999999999999887641 1 0
Q ss_pred ----hcc----CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 247 ----RNT----ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 247 ----~~~----~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
... ..++....+++.+|+..+|..|||++++|+| +|..
T Consensus 235 ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~h-pf~~ 280 (313)
T KOG0198|consen 235 IGREDSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEH-PFLK 280 (313)
T ss_pred HhccCCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhC-hhhh
Confidence 011 2345567888999999999999999999998 4443
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=285.27 Aligned_cols=239 Identities=16% Similarity=0.249 Sum_probs=198.7
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
-.|++.+.+|.|+ | +|+.++.+.+|..+|+|++++...-. .+.+...||-++|+.+.||.+++++..+.+.
T Consensus 44 ~dfe~~~tlGtGSFG--rV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~----- 116 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFG--RVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDN----- 116 (355)
T ss_pred hhhhheeeeccCccc--eEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccC-----
Confidence 4688888999999 9 99999999999999999998753322 5567788999999999999999999999863
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
+++|+||||+ +.|..+|++.+...+.. ...+..||+.||+|||. ++|++|||||+||+++.+|.+||.|||
T Consensus 117 ---~~lymvmeyv~GGElFS~Lrk~~rF~e~~---arFYAAeivlAleylH~-~~iiYRDLKPENiLlD~~G~iKitDFG 189 (355)
T KOG0616|consen 117 ---SNLYMVMEYVPGGELFSYLRKSGRFSEPH---ARFYAAEIVLALEYLHS-LDIIYRDLKPENLLLDQNGHIKITDFG 189 (355)
T ss_pred ---CeEEEEEeccCCccHHHHHHhcCCCCchh---HHHHHHHHHHHHHHHHh-cCeeeccCChHHeeeccCCcEEEEecc
Confidence 4999999999 57999999876544433 34459999999999996 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------ 248 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~------ 248 (771)
++....+. .+.-++++.|+|||++.+ +.+..++|.|+||+|||||+.|.+||...+...
T Consensus 190 FAK~v~~r---------T~TlCGTPeYLAPEii~s------k~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~ 254 (355)
T KOG0616|consen 190 FAKRVSGR---------TWTLCGTPEYLAPEIIQS------KGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKIL 254 (355)
T ss_pred ceEEecCc---------EEEecCCccccChHHhhc------CCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHH
Confidence 99988652 344456679999999987 688899999999999999999999986554322
Q ss_pred ------cCCCCcchHHHHHHHhccCCCCCCC-----hHHHhhCCCCCcch
Q 004157 249 ------TASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENSEYFQNK 287 (771)
Q Consensus 249 ------~~~IP~~l~~~i~~lL~~~P~~Rps-----~~~lL~~~~fF~n~ 287 (771)
...+...+.+++.+||+.|-.+|.. ..++..| +||+..
T Consensus 255 ~~~v~fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H-~wF~~v 303 (355)
T KOG0616|consen 255 EGKVKFPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNH-PWFKGV 303 (355)
T ss_pred hCcccCCcccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccC-cccccc
Confidence 2345567889999999999999942 4466555 677653
|
|
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=307.16 Aligned_cols=234 Identities=17% Similarity=0.240 Sum_probs=187.6
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEE
Q 004157 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIY 103 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iy 103 (771)
.||.|+ | +||+++++.+|+.|+||++.+... .......+.+|+++|++++||||+++++.++.. ..+|
T Consensus 2 ~lG~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~--------~~~~ 71 (323)
T cd05571 2 LLGKGTFG--KVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTH--------DRLC 71 (323)
T ss_pred eeeeCCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcC--------CEEE
Confidence 578887 8 999999999999999999986422 223445677899999999999999999999863 4899
Q ss_pred EEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCC
Q 004157 104 IVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (771)
Q Consensus 104 IVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~ 181 (771)
|||||+ ++|.+++...... ....+.+++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++.....
T Consensus 72 lv~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~qi~~~L~~lH~-~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~ 147 (323)
T cd05571 72 FVMEYANGGELFFHLSRERVF---SEDRARFYGAEIVSALGYLHS-CDVVYRDLKLENLMLDKDGHIKITDFGLCKEGIS 147 (323)
T ss_pred EEEeCCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHh-CCeEeCCCCHHHEEECCCCCEEEeeCCCCccccc
Confidence 999999 4788888765432 344566779999999999996 8999999999999999999999999999875432
Q ss_pred CCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh------------cc
Q 004157 182 NNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------------NT 249 (771)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------------~~ 249 (771)
... ......++..|+|||++.+ ..++.++|+|||||++|||++|..||...+.. ..
T Consensus 148 ~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p 215 (323)
T cd05571 148 DGA------TMKTFCGTPEYLAPEVLED------NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP 215 (323)
T ss_pred CCC------cccceecCccccChhhhcC------CCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence 111 0112334568999999876 35778999999999999999999888543211 11
Q ss_pred CCCCcchHHHHHHHhccCCCCCC-----ChHHHhhCCCCCcc
Q 004157 250 ASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENSEYFQN 286 (771)
Q Consensus 250 ~~IP~~l~~~i~~lL~~~P~~Rp-----s~~~lL~~~~fF~n 286 (771)
..++..+.+++.+||..+|.+|+ ++.++++| +||.+
T Consensus 216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h-~~f~~ 256 (323)
T cd05571 216 RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH-RFFAS 256 (323)
T ss_pred CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC-CCcCC
Confidence 34677889999999999999999 89999998 56655
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-34 Score=304.71 Aligned_cols=251 Identities=16% Similarity=0.198 Sum_probs=192.3
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch------------hHHHHHHHHHHHHhcCCCCCeeEEe
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD------------GHLAAARNGVKRLRTVRHPNILAFL 85 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~------------~~~~~~~~ei~~Lk~LrHPnIlkv~ 85 (771)
..|++++.||.|. | .|-+|++..+++.||||+++++.... ...+..++|+.+||+|+|||||+++
T Consensus 97 Nqy~l~~eiG~G~yG--kVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 97 NQYELIKEIGSGQYG--KVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred hheehhhhhcCCccc--eEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 4699999999999 9 99999999999999999999753211 2246889999999999999999999
Q ss_pred eeEEecccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEc
Q 004157 86 HSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT 163 (771)
Q Consensus 86 d~~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~ 163 (771)
+++.+.. .+.+|||+||| +++.+.=.... ......-+.++..++.||.|||. .|||||||||+|++++
T Consensus 175 EvLDDP~------s~~~YlVley~s~G~v~w~p~d~~---els~~~Ar~ylrDvv~GLEYLH~-QgiiHRDIKPsNLLl~ 244 (576)
T KOG0585|consen 175 EVLDDPE------SDKLYLVLEYCSKGEVKWCPPDKP---ELSEQQARKYLRDVVLGLEYLHY-QGIIHRDIKPSNLLLS 244 (576)
T ss_pred EeecCcc------cCceEEEEEeccCCccccCCCCcc---cccHHHHHHHHHHHHHHHHHHHh-cCeeccccchhheEEc
Confidence 9998766 44999999999 45433211111 02223345559999999999996 8999999999999999
Q ss_pred CCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCCh
Q 004157 164 QTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT 243 (771)
Q Consensus 164 ~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~ 243 (771)
++|.+||+|||.+..............+. ..++++.|+|||.+.++-. ....+.+.|||+||+++|.++.|..||-.
T Consensus 245 ~~g~VKIsDFGVs~~~~~~~~~~~d~~L~-~tvGTPAF~APE~c~~~~~--~~~~g~a~DiWalGVTLYCllfG~~PF~~ 321 (576)
T KOG0585|consen 245 SDGTVKISDFGVSNEFPQGSDEGSDDQLS-RTVGTPAFFAPELCSGGNS--FSYSGFALDIWALGVTLYCLLFGQLPFFD 321 (576)
T ss_pred CCCcEEeeccceeeecccCCccccHHHHh-hcCCCccccchHhhcCCCC--ccccchhhhhhhhhhhHHHhhhccCCccc
Confidence 99999999999998764332111111111 1355669999999887422 13456799999999999999999988765
Q ss_pred hhhhc----c----------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 244 EELRN----T----------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 244 ~~l~~----~----------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
+.... + ..+...+.+++.+||.+||..|+++.++..|+|.-
T Consensus 322 ~~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt 376 (576)
T KOG0585|consen 322 DFELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVT 376 (576)
T ss_pred chHHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceec
Confidence 43211 1 22455689999999999999999999998885533
|
|
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=313.28 Aligned_cols=195 Identities=22% Similarity=0.278 Sum_probs=169.3
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-C-----CCeeEEeeeEEec
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-H-----PNILAFLHSTEVE 91 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-H-----PnIlkv~d~~e~e 91 (771)
.+|+|.+.||.|+ | .|.+|.++.+++.||||++..+ .....+...|+++|..|+ | -|||+++|+|..
T Consensus 186 ~rY~V~e~LGkGtFG--QVvk~~d~~T~e~VAIKIiKN~---k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~f- 259 (586)
T KOG0667|consen 186 YRYEVLEVLGKGSFG--QVVKAYDHKTGEIVAIKIIKNK---KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYF- 259 (586)
T ss_pred EEEEEEEEecccccc--eeEEEEecCCCcEEEEEeeccC---hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccc-
Confidence 3789999999999 9 9999999999999999999743 356778889999999998 4 289999999987
Q ss_pred ccCcCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCC--CcE
Q 004157 92 NIDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT--LDW 168 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~--G~~ 168 (771)
++++|||+|.. .+|+++|+.+.+.+. ....++.++.||+.||.|||+ .+||||||||+||++... ..+
T Consensus 260 -------r~HlciVfELL~~NLYellK~n~f~Gl-sl~~ir~~~~Qil~~L~~L~~-l~IIHcDLKPENILL~~~~r~~v 330 (586)
T KOG0667|consen 260 -------RNHLCIVFELLSTNLYELLKNNKFRGL-SLPLVRKFAQQILTALLFLHE-LGIIHCDLKPENILLKDPKRSRI 330 (586)
T ss_pred -------ccceeeeehhhhhhHHHHHHhcCCCCC-CHHHHHHHHHHHHHHHHHHHh-CCeeeccCChhheeeccCCcCce
Confidence 45999999999 689999999988764 345577789999999999996 999999999999999754 469
Q ss_pred EEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCCh
Q 004157 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT 243 (771)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~ 243 (771)
|++|||.++..... -|.++....|+|||++.+ ..|+.++|||||||+++||++|.++|..
T Consensus 331 KVIDFGSSc~~~q~---------vytYiQSRfYRAPEVILG------lpY~~~IDmWSLGCIlAEL~tG~PLfpG 390 (586)
T KOG0667|consen 331 KVIDFGSSCFESQR---------VYTYIQSRFYRAPEVILG------LPYDTAIDMWSLGCILAELFTGEPLFPG 390 (586)
T ss_pred eEEecccccccCCc---------ceeeeeccccccchhhcc------CCCCCccceeehhhhHHhHhcCccccCC
Confidence 99999999877542 235677789999999998 4788999999999999999999998753
|
|
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-33 Score=294.70 Aligned_cols=243 Identities=19% Similarity=0.261 Sum_probs=185.3
Q ss_pred CceecCCCCCCC-CceEEEEeEECC-CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC---CCCCeeEEeeeEEecccC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKD-DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV---RHPNILAFLHSTEVENID 94 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~-~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L---rHPnIlkv~d~~e~e~~d 94 (771)
+|++.+.||.|+ | +||+|++.. +|..|+||++......+.....+.+|+..++.+ +||||+++++++.....+
T Consensus 2 ~Y~~~~~lg~G~~g--~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~ 79 (290)
T cd07862 2 QYECVAEIGEGAYG--KVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 79 (290)
T ss_pred CcceeeEeccCCCe--EEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence 599999999998 8 999999854 468899999986544333333455666666655 699999999998632211
Q ss_pred cCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 95 ATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
....+|+|||++ ++|.+++....... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+||
T Consensus 80 ---~~~~~~lv~e~~~~~l~~~~~~~~~~~-~~~~~~~~i~~qi~~aL~~lH~-~~iiH~dlkp~Nil~~~~~~~kl~Df 154 (290)
T cd07862 80 ---RETKLTLVFEHVDQDLTTYLDKVPEPG-VPTETIKDMMFQLLRGLDFLHS-HRVVHRDLKPQNILVTSSGQIKLADF 154 (290)
T ss_pred ---CCCcEEEEEccCCCCHHHHHHhCCCCC-CCHHHHHHHHHHHHHHHHHHHH-CCeeeCCCCHHHEEEcCCCCEEEccc
Confidence 134799999999 67888887643222 2344567779999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h--
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R-- 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~-- 247 (771)
|++....... ......++..|+|||++.+ ..++.++|+|||||++|||++|.++|..... .
T Consensus 155 g~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i 221 (290)
T cd07862 155 GLARIYSFQM-------ALTSVVVTLWYRAPEVLLQ------SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKI 221 (290)
T ss_pred cceEeccCCc-------ccccccccccccChHHHhC------CCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHH
Confidence 9987654321 0112234558999999865 3566789999999999999999988753210 0
Q ss_pred ---------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 248 ---------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 248 ---------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
....++..+.+++.+||+.+|++||++.++++|++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~ 289 (290)
T cd07862 222 LDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 289 (290)
T ss_pred HHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCC
Confidence 00235566789999999999999999999999844
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-33 Score=294.58 Aligned_cols=243 Identities=19% Similarity=0.256 Sum_probs=187.4
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC---CCCCeeEEeeeEEecccCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV---RHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L---rHPnIlkv~d~~e~e~~d~ 95 (771)
+|++.+.||.|+ | +||+|+++.+|+.|+||.+......+.....+.+|+..+++| +||||+++++++.....+
T Consensus 1 ~y~~~~~lg~g~~g--~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~- 77 (288)
T cd07863 1 QYEPVAEIGVGAYG--TVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTD- 77 (288)
T ss_pred CceEeeEEeecCCe--EEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCC-
Confidence 599999999998 8 999999999999999999986543332233455677666665 699999999998753221
Q ss_pred CCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 96 ~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
....+|+|+|++ ++|..++....... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 78 --~~~~~~lv~e~~~~~l~~~~~~~~~~~-~~~~~~~~~~~qi~~al~~lH~-~~ivH~dikp~Nili~~~~~~kl~dfg 153 (288)
T cd07863 78 --RETKVTLVFEHVDQDLRTYLDKVPPPG-LPAETIKDLMRQFLRGLDFLHA-NCIVHRDLKPENILVTSGGQVKLADFG 153 (288)
T ss_pred --CCceEEEEEcccccCHHHHHHhcCCCC-CCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEECCCCCEEECccC
Confidence 134789999999 57888887643221 2345577789999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h---
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R--- 247 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~--- 247 (771)
++........ .....++..|+|||++.+ ..++.++|+|||||++|+|++|.++|..... .
T Consensus 154 ~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~------~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~ 220 (288)
T cd07863 154 LARIYSCQMA-------LTPVVVTLWYRAPEVLLQ------STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIF 220 (288)
T ss_pred ccccccCccc-------CCCccccccccCchHhhC------CCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHH
Confidence 9876543211 111233458999999865 3567899999999999999999988743210 0
Q ss_pred --------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 248 --------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 248 --------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
....++..+.+++.+||..||.+||++.+++.|++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~ 287 (288)
T cd07863 221 DLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPF 287 (288)
T ss_pred HHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCC
Confidence 01235666789999999999999999999999844
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-33 Score=302.92 Aligned_cols=238 Identities=19% Similarity=0.206 Sum_probs=188.4
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCc-EEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSP-VSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~-VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
+..+.+.+|.|+ | +||+|.++ |+. |+||++......+...+.+++|+.+|.+|+|||||++++++....
T Consensus 42 ~l~~~~~iG~G~~g--~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~----- 112 (362)
T KOG0192|consen 42 ELPIEEVLGSGSFG--TVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPP----- 112 (362)
T ss_pred HhhhhhhcccCCce--eEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC-----
Confidence 355667799998 8 99999997 666 999999876555444778999999999999999999999997632
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCC-ceecCCCCCCEEEcCCC-cEEEEcc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCK-LVHGNVCLSSVVVTQTL-DWKLHAF 173 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~-ivH~dIkp~NI~v~~~G-~~KL~dF 173 (771)
..++|||||+ ++|..+|..... .......+..++.||+.||.|||+ ++ |||||||++||+|+.++ .+||+||
T Consensus 113 --~~~~iVtEy~~~GsL~~~l~~~~~-~~l~~~~~l~~aldiArGm~YLH~-~~~iIHrDLK~~NiLv~~~~~~~KI~DF 188 (362)
T KOG0192|consen 113 --GSLCIVTEYMPGGSLSVLLHKKRK-RKLPLKVRLRIALDIARGMEYLHS-EGPIIHRDLKSDNILVDLKGKTLKIADF 188 (362)
T ss_pred --CceEEEEEeCCCCcHHHHHhhccc-CCCCHHHHHHHHHHHHHHHHHHhc-CCCeeecccChhhEEEcCCCCEEEECCC
Confidence 1589999999 689999977411 111222334459999999999997 78 99999999999999998 9999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------ 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------ 247 (771)
|+++....... . .....++..|||||++.+. ...++.++|+||||+++|||++|..||......
T Consensus 189 Glsr~~~~~~~----~--~~~~~GT~~wMAPEv~~~~----~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v 258 (362)
T KOG0192|consen 189 GLSREKVISKT----S--MTSVAGTYRWMAPEVLRGE----KSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAV 258 (362)
T ss_pred ccceeeccccc----c--ccCCCCCccccChhhhcCC----CCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 99987764310 0 1112344589999999853 256889999999999999999999888543211
Q ss_pred --------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 --------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 --------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....|+.+..++.+|++.+|..||+..+++..
T Consensus 259 ~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~ 299 (362)
T KOG0192|consen 259 VVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSR 299 (362)
T ss_pred HhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHH
Confidence 113377789999999999999999999988754
|
|
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=286.20 Aligned_cols=243 Identities=16% Similarity=0.225 Sum_probs=199.8
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
....|++-+.||.|. + .||++.++.+|+.+++|+++.+.......+.+.+|+++.+.|+||||+++++.+..+.
T Consensus 9 f~d~y~l~e~igkG~FS--vVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~--- 83 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFS--VVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEES--- 83 (355)
T ss_pred cchhhhHHHHHccCchH--HHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccc---
Confidence 566799999999998 7 8999999999999999999876555556788999999999999999999999998754
Q ss_pred CCcccEEEEEecCCc--chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCC---CcEEE
Q 004157 96 TSTKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT---LDWKL 170 (771)
Q Consensus 96 ~~~~~~iyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~---G~~KL 170 (771)
..|||+|+|. .|..-|-.+.. ..+-.....+.||+.||.|+|. ++|||||+||+|+++-.. .-+||
T Consensus 84 -----~~ylvFe~m~G~dl~~eIV~R~~---ySEa~aSH~~rQiLeal~yCH~-n~IvHRDvkP~nllLASK~~~A~vKL 154 (355)
T KOG0033|consen 84 -----FHYLVFDLVTGGELFEDIVAREF---YSEADASHCIQQILEALAYCHS-NGIVHRDLKPENLLLASKAKGAAVKL 154 (355)
T ss_pred -----eeEEEEecccchHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHh-cCceeccCChhheeeeeccCCCceee
Confidence 8899999993 56654443321 1222245559999999999995 999999999999999643 44999
Q ss_pred EccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL---- 246 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l---- 246 (771)
+|||++..+.+. ....++.+.+.|++||+++. ..++..+|||+.|+++|-|+.|.+||..++.
T Consensus 155 ~~FGvAi~l~~g-------~~~~G~~GtP~fmaPEvvrk------dpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rly 221 (355)
T KOG0033|consen 155 ADFGLAIEVNDG-------EAWHGFAGTPGYLSPEVLKK------DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLY 221 (355)
T ss_pred cccceEEEeCCc-------cccccccCCCcccCHHHhhc------CCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHH
Confidence 999999988732 12345567789999999987 4788899999999999999999999876321
Q ss_pred ------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 247 ------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 247 ------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
+....|.++..+++++||..||.+|+|+.+.|+|+|..+.
T Consensus 222 e~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r 273 (355)
T KOG0033|consen 222 EQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICNR 273 (355)
T ss_pred HHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcch
Confidence 1335788889999999999999999999999999766544
|
|
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-33 Score=301.77 Aligned_cols=241 Identities=16% Similarity=0.164 Sum_probs=194.8
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
...+|++.+.||.|+ | .||+++++.+|..|++|++.... .......+.+|+++|++++||||+++++++..+
T Consensus 3 ~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---- 75 (331)
T cd06649 3 KDDDFERISELGAGNGG--VVTKVQHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD---- 75 (331)
T ss_pred CcccceEEEeecCCCCE--EEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC----
Confidence 466899999999998 8 99999999999999999998643 234456788999999999999999999999864
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+|+||||+ ++|.+++..... .....+..++.|++.||.|||+..+++||||||+||+++.+|.+||+||
T Consensus 76 ----~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Df 148 (331)
T cd06649 76 ----GEISICMEHMDGGSLDQVLKEAKR---IPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDF 148 (331)
T ss_pred ----CEEEEEeecCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccC
Confidence 3899999999 579999877543 2344566779999999999997557999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------ 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------ 247 (771)
|++....... .....++..|+|||++.+ ..++.++|+|||||++|||++|..||......
T Consensus 149 g~~~~~~~~~--------~~~~~g~~~y~aPE~~~~------~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~ 214 (331)
T cd06649 149 GVSGQLIDSM--------ANSFVGTRSYMSPERLQG------THYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIF 214 (331)
T ss_pred cccccccccc--------cccCCCCcCcCCHhHhcC------CCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHh
Confidence 9987654311 111234558999999876 35678999999999999999999887421100
Q ss_pred ------------------------------------------------------ccCCCCcchHHHHHHHhccCCCCCCC
Q 004157 248 ------------------------------------------------------NTASIPKSLLPDYQRLLSSMPSRRLN 273 (771)
Q Consensus 248 ------------------------------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps 273 (771)
....++..+.+++.+||..||++||+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt 294 (331)
T cd06649 215 GRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERAD 294 (331)
T ss_pred cccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCC
Confidence 00124567889999999999999999
Q ss_pred hHHHhhCCCCCcc
Q 004157 274 SSKLIENSEYFQN 286 (771)
Q Consensus 274 ~~~lL~~~~fF~n 286 (771)
+.++++| +||+.
T Consensus 295 ~~ell~h-~~~~~ 306 (331)
T cd06649 295 LKMLMNH-TFIKR 306 (331)
T ss_pred HHHHhcC-hHHhh
Confidence 9999998 55543
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-33 Score=304.99 Aligned_cols=238 Identities=15% Similarity=0.241 Sum_probs=194.1
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.|++.+.||.|+ | .||+|+++.+|+.|+||++.+.... ......+.+|+++++.++||||+++++.++..
T Consensus 2 ~y~~~~~ig~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~------ 73 (333)
T cd05600 2 DFQILTQVGQGGYG--QVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDD------ 73 (333)
T ss_pred CcEEEEEEeecCCe--EEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcC------
Confidence 599999999998 8 9999999999999999999864222 13455678899999999999999999999863
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
.++||||||+ ++|.+++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~e~~~g~~L~~~l~~~~~l---~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nil~~~~~~~kL~Dfg~ 147 (333)
T cd05600 74 --EYLYLAMEYVPGGDFRTLLNNLGVL---SEDHARFYMAEMFEAVDALHE-LGYIHRDLKPENFLIDASGHIKLTDFGL 147 (333)
T ss_pred --CEEEEEEeCCCCCCHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCccccCCCHHHEEECCCCCEEEEeCcC
Confidence 4899999999 5799999765432 234456669999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc-------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------- 248 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~------- 248 (771)
+...... .....++..|+|||++.+ ..++.++|+|||||++|||++|..||.......
T Consensus 148 a~~~~~~---------~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~ 212 (333)
T cd05600 148 SKGIVTY---------ANSVVGSPDYMAPEVLRG------KGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKY 212 (333)
T ss_pred Ccccccc---------cCCcccCccccChhHhcC------CCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHh
Confidence 8765431 112234568999999876 356789999999999999999999885432110
Q ss_pred -------c------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcch
Q 004157 249 -------T------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNK 287 (771)
Q Consensus 249 -------~------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n~ 287 (771)
. ..++..+.+++.+||..+|.+|+++.++++| +||.+.
T Consensus 213 ~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h-~~~~~~ 263 (333)
T cd05600 213 WKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH-PFFKEV 263 (333)
T ss_pred ccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC-cccCCC
Confidence 0 1346778999999999999999999999998 666653
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=305.64 Aligned_cols=260 Identities=20% Similarity=0.224 Sum_probs=212.6
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
..|..++.+|.|. | .++..+++.++..|++|++......+.....+.+|+..+++++||||+.++|.|+.++
T Consensus 4 ~~Ye~~~~iG~GafG--~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~----- 76 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFG--SALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDG----- 76 (426)
T ss_pred chhhhhhhcCccccc--hhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCC-----
Confidence 4699999999999 8 7888888999999999999987777766778999999999999999999999999753
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+||||||| ++|.+.|++.+.. ...++.|.+.+.|++.|+.|||+ .+|+|||||+.|||++.++.+||+|||+
T Consensus 77 --~~l~Ivm~Y~eGg~l~~~i~~~k~~-~f~E~~i~~~~~Q~~~av~ylH~-~~iLHRDlK~~Nifltk~~~VkLgDfGl 152 (426)
T KOG0589|consen 77 --QLLCIVMEYCEGGDLAQLIKEQKGV-LFPEERILKWFVQILLAVNYLHE-NRVLHRDLKCANIFLTKDKKVKLGDFGL 152 (426)
T ss_pred --ceEEEEEeecCCCCHHHHHHHHhhc-cccHHHHHHHHHHHHHHHHHHHh-hhhhcccchhhhhhccccCceeecchhh
Confidence 3599999999 5799999887622 23345567779999999999995 9999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhcc------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT------ 249 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~~------ 249 (771)
++.+..... .....++++.|+.||++.+ ..|..++|||||||++|||++-++.|...++..+
T Consensus 153 aK~l~~~~~------~a~tvvGTp~YmcPEil~d------~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~ 220 (426)
T KOG0589|consen 153 AKILNPEDS------LASTVVGTPYYMCPEILSD------IPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINR 220 (426)
T ss_pred hhhcCCchh------hhheecCCCcccCHHHhCC------CCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhh
Confidence 998876321 2334466679999999987 5888999999999999999999999987664322
Q ss_pred ---CCC----CcchHHHHHHHhccCCCCCCChHHHhhCCCCCcchhhhhhhhhhhhccCC
Q 004157 250 ---ASI----PKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKLVDTIHFMEILNLKD 302 (771)
Q Consensus 250 ---~~I----P~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n~lv~~~~~L~~l~~k~ 302 (771)
..+ ..++..++..||..+|..||++.++|.+ +......++....+..+....
T Consensus 221 ~~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~-P~l~~~~~~~~~~~~~~~~~~ 279 (426)
T KOG0589|consen 221 GLYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR-PHLLRYLVESQELETSIELPT 279 (426)
T ss_pred ccCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC-hhhhhHHHhhhccccccccCC
Confidence 233 3568888999999999999999999998 444433444444444444433
|
|
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-33 Score=308.73 Aligned_cols=237 Identities=15% Similarity=0.171 Sum_probs=187.4
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
+...+|++.+.||.|+ | .||.+.++.+++.|+||.... ..+.+|+++|++|+||||+++++++...
T Consensus 89 ~~~~~y~~~~~lg~G~~g--~V~~~~d~~~~~~vaiK~~~~--------~~~~~E~~il~~l~HpnIv~~~~~~~~~--- 155 (391)
T PHA03212 89 IEKAGFSILETFTPGAEG--FAFACIDNKTCEHVVIKAGQR--------GGTATEAHILRAINHPSIIQLKGTFTYN--- 155 (391)
T ss_pred cccCCcEEEEEEcCCCCe--EEEEEEECCCCCEEEEechhh--------hhhHHHHHHHHhCCCCCCCCEeEEEEEC---
Confidence 3446799999999998 8 999999999999999997532 2467899999999999999999999863
Q ss_pred cCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 95 ATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
...|+|+|++ ++|..++...... ....+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+||
T Consensus 156 -----~~~~lv~e~~~~~L~~~l~~~~~l---~~~~~~~i~~qi~~aL~ylH~-~~IvHrDiKP~NIll~~~~~vkL~DF 226 (391)
T PHA03212 156 -----KFTCLILPRYKTDLYCYLAAKRNI---AICDILAIERSVLRAIQYLHE-NRIIHRDIKAENIFINHPGDVCLGDF 226 (391)
T ss_pred -----CeeEEEEecCCCCHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHh-CCcccCCCChHhEEEcCCCCEEEEeC
Confidence 4889999999 5788887664322 233456679999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCC-Chhh-------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLS-KTEE------- 245 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~-~~~~------- 245 (771)
|++........ .....+.++..|+|||++.+ ..++.++|+|||||++|||++|..++ ....
T Consensus 227 G~a~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~ 295 (391)
T PHA03212 227 GAACFPVDINA-----NKYYGWAGTIATNAPELLAR------DPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDS 295 (391)
T ss_pred Ccccccccccc-----cccccccCccCCCChhhhcC------CCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCch
Confidence 99865432110 01123445668999999876 35678999999999999999997543 1100
Q ss_pred -------------------------h---------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 246 -------------------------L---------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 246 -------------------------l---------------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
+ .....+|..+.+++.+||+.+|.+||++.++|+
T Consensus 296 ~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 296 DRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred hHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0 001235667889999999999999999999999
Q ss_pred CCCCCcc
Q 004157 280 NSEYFQN 286 (771)
Q Consensus 280 ~~~fF~n 286 (771)
| +||+.
T Consensus 376 h-p~f~~ 381 (391)
T PHA03212 376 F-AAFQD 381 (391)
T ss_pred C-hhhcc
Confidence 8 45543
|
|
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-32 Score=302.12 Aligned_cols=244 Identities=19% Similarity=0.253 Sum_probs=190.5
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
.-+|++.+.||.|+ | +||.++++.+|..|+||++............+.+|+.+++.++||||+++++++......
T Consensus 20 ~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-- 95 (359)
T cd07876 20 LKRYQQLKPIGSGAQG--IVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSL-- 95 (359)
T ss_pred hhceEEEEEeecCCCE--EEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCc--
Confidence 35799999999998 8 999999999999999999976544444566778999999999999999999998653210
Q ss_pred CcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 97 ~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
.....+|+||||+ +.|...+... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 96 ~~~~~~~lv~e~~~~~l~~~~~~~-----~~~~~~~~~~~qi~~~L~~LH~-~~ivHrDlkp~NIl~~~~~~~kl~Dfg~ 169 (359)
T cd07876 96 EEFQDVYLVMELMDANLCQVIHME-----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGL 169 (359)
T ss_pred cccceeEEEEeCCCcCHHHHHhcc-----CCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEECCCCCEEEecCCC
Confidence 0123689999999 5676666432 2234466779999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh---------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--------- 246 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l--------- 246 (771)
+....... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||...+.
T Consensus 170 a~~~~~~~-------~~~~~~~t~~y~aPE~~~~------~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~ 236 (359)
T cd07876 170 ARTACTNF-------MMTPYVVTRYYRAPEVILG------MGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIE 236 (359)
T ss_pred ccccccCc-------cCCCCcccCCCCCchhccC------CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 87543311 0112234558999999876 3567789999999999999999988853210
Q ss_pred -----------------h----cc------------------------CCCCcchHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 247 -----------------R----NT------------------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 247 -----------------~----~~------------------------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
. .. ...+..+.+++.+||..+|.+||++.++++|+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 316 (359)
T cd07876 237 QLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHP 316 (359)
T ss_pred hcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCc
Confidence 0 00 01234578999999999999999999999994
Q ss_pred CCCc
Q 004157 282 EYFQ 285 (771)
Q Consensus 282 ~fF~ 285 (771)
||.
T Consensus 317 -~~~ 319 (359)
T cd07876 317 -YIT 319 (359)
T ss_pred -hhh
Confidence 443
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=312.11 Aligned_cols=247 Identities=16% Similarity=0.272 Sum_probs=189.0
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
+..+|++++.||.|+ | +||+|+++.+++.||||++.... ....+|+.+|+.++||||+++++++..+..+.
T Consensus 64 ~~~~y~~~~~LG~G~fg--~Vy~~~~~~~~~~vAiK~i~~~~------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~ 135 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFG--VVYEAICIDTSEKVAIKKVLQDP------QYKNRELLIMKNLNHINIIFLKDYYYTECFKK 135 (440)
T ss_pred cCCeEEEeEEEEeCCCE--EEEEEEECCCCCEEEEEEEecCc------chHHHHHHHHHhcCCCCCcceeeeEeeccccc
Confidence 456799999999998 8 99999999999999999986431 12457999999999999999999875432111
Q ss_pred CCcccEEEEEecCC-cchHHHHHHhCC-CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC-cEEEEc
Q 004157 96 TSTKITIYIVTEPV-MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL-DWKLHA 172 (771)
Q Consensus 96 ~~~~~~iyIVtE~v-~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G-~~KL~d 172 (771)
......+|+||||+ ++|.+++..... ........+..+++||+.||.|||+ .+|+||||||+||+++.++ .+||+|
T Consensus 136 ~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~-~~IiHrDLKp~NILl~~~~~~vkL~D 214 (440)
T PTZ00036 136 NEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHS-KFICHRDLKPQNLLIDPNTHTLKLCD 214 (440)
T ss_pred CCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCEecCCcCHHHEEEcCCCCceeeec
Confidence 11133678999999 577777764321 1223344566778999999999996 8999999999999999665 699999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----hhc
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LRN 248 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----l~~ 248 (771)
||+++....... .....++..|+|||++.+. ..++.++|+|||||++|||++|.+||.... +..
T Consensus 215 FGla~~~~~~~~-------~~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~ 282 (440)
T PTZ00036 215 FGSAKNLLAGQR-------SVSYICSRFYRAPELMLGA-----TNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVR 282 (440)
T ss_pred cccchhccCCCC-------cccCCCCcCccCHHHhcCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence 999987643211 1123455689999997653 356789999999999999999999885421 000
Q ss_pred -------------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 249 -------------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 249 -------------------------------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
....|..+.+++.+||..+|.+|+++.++++| +||.
T Consensus 283 i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h-p~f~ 355 (440)
T PTZ00036 283 IIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD-PFFD 355 (440)
T ss_pred HHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC-hhHH
Confidence 01245678899999999999999999999998 5664
|
|
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-32 Score=295.49 Aligned_cols=243 Identities=17% Similarity=0.269 Sum_probs=191.0
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
-..|++.+.||.|+ | +||+|+++.+++.|+||++....... ....+.+|++++++++||||+++++++..+
T Consensus 5 ~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 76 (309)
T cd07872 5 METYIKLEKLGEGTYA--TVFKGRSKLTENLVALKEIRLEHEEG-APCTAIREVSLLKDLKHANIVTLHDIVHTD----- 76 (309)
T ss_pred CCceEEEEEecccCCE--EEEEEEecCCCCeEEEEEeeccccCC-cchhHHHHHHHHHhCCCCCcceEEEEEeeC-----
Confidence 35699999999998 8 99999999999999999998643322 234567899999999999999999999864
Q ss_pred CcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 97 ~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+|+||||+ ++|..++...... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 77 ---~~~~lv~e~~~~~l~~~~~~~~~~--~~~~~~~~~~~qi~~aL~~lH~-~~ivH~dlkp~Nill~~~~~~kl~Dfg~ 150 (309)
T cd07872 77 ---KSLTLVFEYLDKDLKQYMDDCGNI--MSMHNVKIFLYQILRGLAYCHR-RKVLHRDLKPQNLLINERGELKLADFGL 150 (309)
T ss_pred ---CeEEEEEeCCCCCHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECCCCCEEECcccc
Confidence 3899999999 5788777654321 2234455668999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh--------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~-------- 247 (771)
+......... ......+..|+|||++.+. ..++.++|+|||||++|+|++|.+||......
T Consensus 151 ~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 219 (309)
T cd07872 151 ARAKSVPTKT------YSNEVVTLWYRPPDVLLGS-----SEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFR 219 (309)
T ss_pred ceecCCCccc------cccccccccccCCHHHhCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence 8764332110 1112335589999987653 34567899999999999999999887432110
Q ss_pred ----------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 ----------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 ----------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||+.+|.+|+++.++++| +||+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h-~~~~~ 291 (309)
T cd07872 220 LLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH-AYFRS 291 (309)
T ss_pred HhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC-hhhhh
Confidence 012356678899999999999999999999998 56654
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-33 Score=304.74 Aligned_cols=245 Identities=16% Similarity=0.242 Sum_probs=194.9
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
+|++.+.||.|+ | +||+|+++.+|+.|+||++.+..... .....+++|+++++.++||||+++++.++.+
T Consensus 2 ~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------ 73 (350)
T cd05573 2 DFEVIKVIGRGAFG--EVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDE------ 73 (350)
T ss_pred CceEEEEEEeCCcE--EEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecC------
Confidence 599999999998 8 99999999999999999998643222 3456788999999999999999999999863
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
.++|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~e~~~~~~L~~~l~~~~~---l~~~~~~~i~~qi~~aL~~LH~-~giiH~Dlkp~NIll~~~~~~kL~Dfg~ 147 (350)
T cd05573 74 --EHLYLVMEYMPGGDLMNLLIRKDV---FPEETARFYIAELVLALDSVHK-LGFIHRDIKPDNILIDADGHIKLADFGL 147 (350)
T ss_pred --CeEEEEEcCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHeEECCCCCEEeecCCC
Confidence 4899999999 579998877632 2344566779999999999996 9999999999999999999999999999
Q ss_pred ccccCCCCCCC-----------------------CCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHH
Q 004157 176 LSEFDGNNEAA-----------------------NGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIY 232 (771)
Q Consensus 176 a~~~~~~~~~~-----------------------~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~ 232 (771)
+.......... ..........++..|+|||++.+ ..++.++|+|||||++|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlG~il~ 221 (350)
T cd05573 148 CKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRG------TPYGLECDWWSLGVILY 221 (350)
T ss_pred CccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcC------CCCCCceeeEecchhhh
Confidence 98665432000 00001112234458999999876 36778999999999999
Q ss_pred HHhhCCCCCChhhh-------h---------ccCCCCcchHHHHHHHhccCCCCCCC-hHHHhhCCCCCcc
Q 004157 233 ELFSGMRLSKTEEL-------R---------NTASIPKSLLPDYQRLLSSMPSRRLN-SSKLIENSEYFQN 286 (771)
Q Consensus 233 el~~g~~p~~~~~l-------~---------~~~~IP~~l~~~i~~lL~~~P~~Rps-~~~lL~~~~fF~n 286 (771)
||++|..||..... . ....++..+.+++.+||. +|..|++ +.++++| +||.+
T Consensus 222 ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h-p~~~~ 290 (350)
T cd05573 222 EMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH-PFFKG 290 (350)
T ss_pred hhccCCCCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC-CCcCC
Confidence 99999998854221 0 112357888999999997 9999999 9999998 56654
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=305.84 Aligned_cols=247 Identities=18% Similarity=0.237 Sum_probs=191.9
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|++++.||.|+ | +||+|.++.+|+.|+||++............+.+|+++|+.++||||++++++++..+.+ .
T Consensus 1 ~~~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~---~ 75 (372)
T cd07853 1 DVEPDRPIGYGAFG--VVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHID---P 75 (372)
T ss_pred CCcccceeeeCCCE--EEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCcc---c
Confidence 488999999998 8 999999999999999999875433334456788999999999999999999999764311 1
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
...+|+||||+ .+|...+..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++.
T Consensus 76 ~~~~~lv~e~~~~~l~~~~~~~~~---l~~~~~~~~~~qi~~aL~~LH~-~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~ 151 (372)
T cd07853 76 FEEIYVVTELMQSDLHKIIVSPQP---LSSDHVKVFLYQILRGLKYLHS-AGILHRDIKPGNLLVNSNCVLKICDFGLAR 151 (372)
T ss_pred cceEEEEeeccccCHHHHHhcCCC---CCHHHHHHHHHHHHHHHHHHHh-CCeeCCCCChHHEEECCCCCEEecccccee
Confidence 23789999999 567777755432 2344567779999999999996 899999999999999999999999999987
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh----------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---------- 247 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~---------- 247 (771)
........ .......+..|+|||++.+. ..++.++|+|||||++|||++|..||......
T Consensus 152 ~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~-----~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~ 221 (372)
T cd07853 152 VEEPDESK-----HMTQEVVTQYYRAPEILMGS-----RHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLL 221 (372)
T ss_pred ecccCccc-----cCCCCCcCCCcCCHHHHcCC-----CCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHc
Confidence 65432110 01112345589999998753 34567899999999999999999887432100
Q ss_pred ----------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 ----------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 ----------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
.....+..+.+++.+||+.||.+||++.++++| +||..
T Consensus 222 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h-p~~~~ 293 (372)
T cd07853 222 GTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH-PYLDE 293 (372)
T ss_pred CCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC-HhhCC
Confidence 001235567889999999999999999999999 45543
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-32 Score=291.93 Aligned_cols=240 Identities=15% Similarity=0.213 Sum_probs=190.0
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
|++.+.||.|+ | +||+|.++.+|+.|+||++.+..... .....+.+|++++++++||||+++++.+...
T Consensus 2 f~~~~~lg~G~~g--~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~------- 72 (285)
T cd05631 2 FRHYRVLGKGGFG--EVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETK------- 72 (285)
T ss_pred ceEEEEEecCCCE--EEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccC-------
Confidence 78889999998 8 99999999999999999998643222 2334577899999999999999999998763
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+|+||||+ ++|..++....... .....+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|||++
T Consensus 73 -~~~~lv~e~~~~g~L~~~~~~~~~~~-~~~~~~~~~~~qi~~~l~~lH~-~~iiH~dikp~Nill~~~~~~kl~Dfg~~ 149 (285)
T cd05631 73 -DALCLVLTIMNGGDLKFHIYNMGNPG-FDEQRAIFYAAELCCGLEDLQR-ERIVYRDLKPENILLDDRGHIRISDLGLA 149 (285)
T ss_pred -CeEEEEEEecCCCcHHHHHHhhCCCC-CCHHHHHHHHHHHHHHHHHHHh-CCEEeCCCCHHHEEECCCCCEEEeeCCCc
Confidence 4899999999 57887776533211 2334456668999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-------hh--
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-------LR-- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-------l~-- 247 (771)
........ .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||.... ..
T Consensus 150 ~~~~~~~~-------~~~~~g~~~y~aPE~~~~------~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~ 216 (285)
T cd05631 150 VQIPEGET-------VRGRVGTVGYMAPEVINN------EKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRR 216 (285)
T ss_pred EEcCCCCe-------ecCCCCCCCccCHhhhcC------CCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHH
Confidence 76543110 112234568999999876 356789999999999999999999885321 10
Q ss_pred -------ccCCCCcchHHHHHHHhccCCCCCCC-----hHHHhhCCCCCcc
Q 004157 248 -------NTASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENSEYFQN 286 (771)
Q Consensus 248 -------~~~~IP~~l~~~i~~lL~~~P~~Rps-----~~~lL~~~~fF~n 286 (771)
....++..+..++++||+.+|.+|++ ++++++| +||.+
T Consensus 217 ~~~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h-~~~~~ 266 (285)
T cd05631 217 VKEDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH-PIFKN 266 (285)
T ss_pred hhcccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC-HhhcC
Confidence 11346778899999999999999997 7899988 55644
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=300.24 Aligned_cols=238 Identities=17% Similarity=0.248 Sum_probs=186.1
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHH---hcCCCCCeeEEeeeEEecccCc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRL---RTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~L---k~LrHPnIlkv~d~~e~e~~d~ 95 (771)
|++.+.||.|+ | +||+|.++.+|+.|+||++.+... .....+.+.+|++.+ +.++||||++++++++..
T Consensus 1 y~i~~~lg~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~---- 74 (324)
T cd05589 1 FRCLAVLGRGHFG--KVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTE---- 74 (324)
T ss_pred CeEEEEEeecCCE--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcC----
Confidence 78889999998 8 999999999999999999985421 112344566666554 567899999999999863
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+|+||||+ ++|...+....+ ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+||
T Consensus 75 ----~~~~lv~E~~~~~~L~~~~~~~~l----~~~~~~~~~~qi~~al~~lH~-~~ivHrdlkp~Nill~~~~~~kL~Df 145 (324)
T cd05589 75 ----DHVCFVMEYAAGGDLMMHIHTDVF----SEPRAVFYAACVVLGLQYLHE-NKIVYRDLKLDNLLLDTEGFVKIADF 145 (324)
T ss_pred ----CEEEEEEcCCCCCcHHHHhhcCCC----CHHHHHHHHHHHHHHHHHHHh-CCeEecCCCHHHeEECCCCcEEeCcc
Confidence 4899999999 468777765332 334456669999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------ 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------ 247 (771)
|++........ ......+...|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 146 g~~~~~~~~~~------~~~~~~g~~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i 213 (324)
T cd05589 146 GLCKEGMGFGD------RTSTFCGTPEFLAPEVLTE------TSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSI 213 (324)
T ss_pred cCCccCCCCCC------cccccccCccccCHhHhcC------CCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 99875432111 0112234558999999876 35678899999999999999999998643211
Q ss_pred ------ccCCCCcchHHHHHHHhccCCCCCC-----ChHHHhhCCCCCcc
Q 004157 248 ------NTASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENSEYFQN 286 (771)
Q Consensus 248 ------~~~~IP~~l~~~i~~lL~~~P~~Rp-----s~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||+.+|.+|| ++.++++| +||++
T Consensus 214 ~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~-~~f~~ 262 (324)
T cd05589 214 VNDEVRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ-PFFRD 262 (324)
T ss_pred HhCCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC-CCcCC
Confidence 1235677889999999999999999 68888888 66655
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-32 Score=298.35 Aligned_cols=241 Identities=16% Similarity=0.187 Sum_probs=193.1
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
...+|++.++||.|+ | .||.++++.++..|++|++.... .+.....+.+|+++++.++||||++++++++.+
T Consensus 3 ~~~~y~~~~~lg~g~~g--~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---- 75 (333)
T cd06650 3 KDDDFEKISELGAGNGG--VVFKVSHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD---- 75 (333)
T ss_pred chhhhheeccccCCCCE--EEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCcccceeEEEEEC----
Confidence 456899999999998 8 99999999999999999987643 233456788999999999999999999999874
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+|+||||+ ++|.++++..... ....+..++.||+.||.|||+..+++||||||+||+++.+|.+||+||
T Consensus 76 ----~~~~lv~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Df 148 (333)
T cd06650 76 ----GEISICMEHMDGGSLDQVLKKAGRI---PEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDF 148 (333)
T ss_pred ----CEEEEEEecCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeC
Confidence 4899999999 5799999775432 334456678999999999997568999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc-----
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN----- 248 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~----- 248 (771)
|++....... .....++..|+|||++.+ ..++.++|+|||||++|++++|..||.......
T Consensus 149 g~~~~~~~~~--------~~~~~~~~~y~aPE~~~~------~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~ 214 (333)
T cd06650 149 GVSGQLIDSM--------ANSFVGTRSYMSPERLQG------THYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMF 214 (333)
T ss_pred Ccchhhhhhc--------cccCCCCccccCHHHhcC------CCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHh
Confidence 9987653311 011234458999999876 356678999999999999999987764221000
Q ss_pred -----------------------------------------------------cCCCCcchHHHHHHHhccCCCCCCChH
Q 004157 249 -----------------------------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSS 275 (771)
Q Consensus 249 -----------------------------------------------------~~~IP~~l~~~i~~lL~~~P~~Rps~~ 275 (771)
...++..+.+++.+||..||.+||++.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ 294 (333)
T cd06650 215 GCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLK 294 (333)
T ss_pred cCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHH
Confidence 012345678899999999999999999
Q ss_pred HHhhCCCCCcc
Q 004157 276 KLIENSEYFQN 286 (771)
Q Consensus 276 ~lL~~~~fF~n 286 (771)
+++.| +||+.
T Consensus 295 ell~h-~~~~~ 304 (333)
T cd06650 295 QLMVH-AFIKR 304 (333)
T ss_pred HHhhC-HHHhc
Confidence 99998 55543
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-32 Score=297.18 Aligned_cols=233 Identities=16% Similarity=0.201 Sum_probs=184.8
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEEE
Q 004157 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104 (771)
Q Consensus 27 ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iyI 104 (771)
||.|+ | +||+|+++.+++.|+||++.+... .......+.+|+.+|++++||||+++++.++.+ ..+|+
T Consensus 1 lg~G~~g--~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--------~~~~l 70 (312)
T cd05585 1 IGKGSFG--KVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSP--------EKLYL 70 (312)
T ss_pred CCcCCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecC--------CeEEE
Confidence 56776 7 999999999999999999975321 223456678899999999999999999998763 48999
Q ss_pred EecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCCC
Q 004157 105 VTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGN 182 (771)
Q Consensus 105 VtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~ 182 (771)
||||+ ++|.+++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++......
T Consensus 71 v~e~~~~g~L~~~l~~~~~~---~~~~~~~~~~qi~~~l~~lH~-~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 146 (312)
T cd05585 71 VLAFINGGELFHHLQREGRF---DLSRARFYTAELLCALENLHK-FNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD 146 (312)
T ss_pred EEcCCCCCcHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHh-CCeEeCCCCHHHeEECCCCcEEEEECcccccCccC
Confidence 99999 5798888765432 234456679999999999996 89999999999999999999999999998754321
Q ss_pred CCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh------------ccC
Q 004157 183 NEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------------NTA 250 (771)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------------~~~ 250 (771)
... .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||...... ...
T Consensus 147 ~~~------~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 214 (312)
T cd05585 147 DDK------TNTFCGTPEYLAPELLLG------HGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFPD 214 (312)
T ss_pred CCc------cccccCCcccCCHHHHcC------CCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCCC
Confidence 110 112234558999999876 35778999999999999999999998543221 123
Q ss_pred CCCcchHHHHHHHhccCCCCCCC---hHHHhhCCCCCcc
Q 004157 251 SIPKSLLPDYQRLLSSMPSRRLN---SSKLIENSEYFQN 286 (771)
Q Consensus 251 ~IP~~l~~~i~~lL~~~P~~Rps---~~~lL~~~~fF~n 286 (771)
.++..+.+++.+||..+|.+|++ +.++++| +||..
T Consensus 215 ~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~h-p~~~~ 252 (312)
T cd05585 215 GFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNH-PFFSQ 252 (312)
T ss_pred cCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcC-CCcCC
Confidence 56778999999999999999974 6889998 56654
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-32 Score=293.31 Aligned_cols=241 Identities=18% Similarity=0.269 Sum_probs=181.5
Q ss_pred CCceecCCCCCCC-CceEEEEeEECC--CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKD--DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~--~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
|.|+ +.+||.|+ | +||+|+++. ++..|+||.+..... ...+.+|+++|++++||||+++++.+....
T Consensus 2 ~~~~-~~~lG~G~~g--~Vy~~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--- 71 (317)
T cd07868 2 FEYE-GCKVGRGTYG--HVYKAKRKDGKDDRDYALKQIEGTGI----SMSACREIALLRELKHPNVISLQKVFLSHA--- 71 (317)
T ss_pred cccc-ccccccCCCe--EEEEEEEccCCCCceEEEEEECCCCC----cHHHHHHHHHHHhcCCCCCcceeeeEecCC---
Confidence 3455 56899998 8 999999764 578999999875422 234678999999999999999999987544
Q ss_pred CCcccEEEEEecCC-cchHHHHHHhCCC------CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEE----cC
Q 004157 96 TSTKITIYIVTEPV-MPLSEKIKELGLE------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV----TQ 164 (771)
Q Consensus 96 ~~~~~~iyIVtE~v-~~L~~~L~~~~~~------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v----~~ 164 (771)
...+|+||||+ ++|..++...... .......++.++.||+.||.|||+ .+++||||||+||++ +.
T Consensus 72 ---~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~-~~ivHrDlkp~Nil~~~~~~~ 147 (317)
T cd07868 72 ---DRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA-NWVLHRDLKPANILVMGEGPE 147 (317)
T ss_pred ---CcEEEEEEeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHh-CCEEcCCCCHHHEEEecCCCC
Confidence 34899999999 5788777643211 113345577789999999999996 899999999999999 46
Q ss_pred CCcEEEEccCcccccCCCCCCCCCCccc-cccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCCh
Q 004157 165 TLDWKLHAFDVLSEFDGNNEAANGPMLQ-YAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT 243 (771)
Q Consensus 165 ~G~~KL~dFgla~~~~~~~~~~~~~~~~-~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~ 243 (771)
.|.+||+|||++........ +... ....++..|+|||++.+. ..++.++|+|||||++|+|++|.+||..
T Consensus 148 ~~~~kl~DfG~a~~~~~~~~----~~~~~~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwslG~il~el~~g~~~f~~ 218 (317)
T cd07868 148 RGRVKIADMGFARLFNSPLK----PLADLDPVVVTFWYRAPELLLGA-----RHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred cCcEEEeecCceeccCCCCc----cccccCCccccccccCCHHHcCC-----CCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence 68899999999986643211 1111 122345589999998753 3467889999999999999999988742
Q ss_pred hhh-------------h---------------ccC-------------------------------CCCcchHHHHHHHh
Q 004157 244 EEL-------------R---------------NTA-------------------------------SIPKSLLPDYQRLL 264 (771)
Q Consensus 244 ~~l-------------~---------------~~~-------------------------------~IP~~l~~~i~~lL 264 (771)
.+. . ... ..+..+.+++++||
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL 298 (317)
T cd07868 219 RQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLL 298 (317)
T ss_pred CcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHh
Confidence 110 0 000 01234678899999
Q ss_pred ccCCCCCCChHHHhhCCC
Q 004157 265 SSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 265 ~~~P~~Rps~~~lL~~~~ 282 (771)
..||.+|+|++++|+|++
T Consensus 299 ~~dP~~R~t~~e~l~hp~ 316 (317)
T cd07868 299 TMDPIKRITSEQAMQDPY 316 (317)
T ss_pred ccCcccCCCHHHHhcCCC
Confidence 999999999999999944
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=299.27 Aligned_cols=234 Identities=16% Similarity=0.219 Sum_probs=185.5
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEE
Q 004157 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIY 103 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iy 103 (771)
.||.|+ | +||++.++.+|..|+||++..... .......+.+|+++++.++||||+++++.++.. ..+|
T Consensus 2 ~lG~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~--------~~~~ 71 (323)
T cd05595 2 LLGKGTFG--KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH--------DRLC 71 (323)
T ss_pred eeeeCCCE--EEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecC--------CEEE
Confidence 578887 8 999999999999999999986422 123455677899999999999999999999864 4899
Q ss_pred EEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCC
Q 004157 104 IVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (771)
Q Consensus 104 IVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~ 181 (771)
|||||+ ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++.....
T Consensus 72 lv~E~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~-~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 147 (323)
T cd05595 72 FVMEYANGGELFFHLSRERV---FTEERARFYGAEIVSALEYLHS-RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 147 (323)
T ss_pred EEEeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHEEEcCCCCEEecccHHhccccC
Confidence 999999 478888876542 2344466678999999999996 8999999999999999999999999999875432
Q ss_pred CCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh------------cc
Q 004157 182 NNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------------NT 249 (771)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------------~~ 249 (771)
... ......++..|+|||++.+ ..++.++|+|||||++|||++|..||...... ..
T Consensus 148 ~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p 215 (323)
T cd05595 148 DGA------TMKTFCGTPEYLAPEVLED------NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP 215 (323)
T ss_pred CCC------ccccccCCcCcCCcccccC------CCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC
Confidence 111 0111234558999999875 35678999999999999999999887543211 11
Q ss_pred CCCCcchHHHHHHHhccCCCCCC-----ChHHHhhCCCCCcc
Q 004157 250 ASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENSEYFQN 286 (771)
Q Consensus 250 ~~IP~~l~~~i~~lL~~~P~~Rp-----s~~~lL~~~~fF~n 286 (771)
..+++.+.+++.+||..+|.+|+ ++.++++| .||.+
T Consensus 216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h-~~~~~ 256 (323)
T cd05595 216 RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH-RFFLS 256 (323)
T ss_pred CCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC-CCcCC
Confidence 35677889999999999999998 89999998 56654
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-32 Score=302.83 Aligned_cols=239 Identities=18% Similarity=0.208 Sum_probs=192.1
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCC-CcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDG-SPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g-~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
...|++.+.||.|+ | +||+|+++.++ ..|+||++.+... .....+.+.+|+++++.++||||+++++++..+
T Consensus 29 ~~~y~~~~~ig~G~~g--~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~--- 103 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFG--RVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDE--- 103 (340)
T ss_pred hhhcEEEEEEeecCCe--EEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeC---
Confidence 34699999999998 8 99999876554 6899999975322 223456788999999999999999999999864
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
..+|+||||+ ++|.+++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|
T Consensus 104 -----~~~~lv~Ey~~~g~L~~~i~~~~~~---~~~~~~~~~~qi~~aL~~LH~-~~ivHrDLkp~NILl~~~~~ikL~D 174 (340)
T PTZ00426 104 -----SYLYLVLEFVIGGEFFTFLRRNKRF---PNDVGCFYAAQIVLIFEYLQS-LNIVYRDLKPENLLLDKDGFIKMTD 174 (340)
T ss_pred -----CEEEEEEeCCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeEccCCCHHHEEECCCCCEEEec
Confidence 4899999999 5799998765432 344456679999999999996 8999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-----
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----- 247 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~----- 247 (771)
||++...... .....++..|+|||++.+ ..++.++|+|||||++|||++|.+||......
T Consensus 175 FG~a~~~~~~---------~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~ 239 (340)
T PTZ00426 175 FGFAKVVDTR---------TYTLCGTPEYIAPEILLN------VGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQK 239 (340)
T ss_pred CCCCeecCCC---------cceecCChhhcCHHHHhC------CCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHH
Confidence 9998765431 112234558999999876 35678999999999999999999988543211
Q ss_pred ---c----cCCCCcchHHHHHHHhccCCCCCC-----ChHHHhhCCCCCcc
Q 004157 248 ---N----TASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENSEYFQN 286 (771)
Q Consensus 248 ---~----~~~IP~~l~~~i~~lL~~~P~~Rp-----s~~~lL~~~~fF~n 286 (771)
. ...++..+.+++++||+.+|.+|+ ++.++++| +||++
T Consensus 240 i~~~~~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h-p~f~~ 289 (340)
T PTZ00426 240 ILEGIIYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH-PWFGN 289 (340)
T ss_pred HhcCCCCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC-CCcCC
Confidence 1 133566788999999999999996 89999998 67765
|
|
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-32 Score=300.25 Aligned_cols=240 Identities=17% Similarity=0.226 Sum_probs=186.9
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|++.++||.|+ | +||+|+++.+|+.|+||++.... .+.....+.+|+++++.++||||++++++++..
T Consensus 75 ~~~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------- 144 (353)
T PLN00034 75 ELERVNRIGSGAGG--TVYKVIHRPTGRLYALKVIYGNH-EDTVRRQICREIEILRDVNHPNVVKCHDMFDHN------- 144 (353)
T ss_pred HHhhhhhccCCCCe--EEEEEEECCCCCEEEEEEEecCC-cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccC-------
Confidence 588899999998 8 99999999999999999997543 334456788999999999999999999999763
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+|+||||+ ++|.... . .....+..+++||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 145 -~~~~lv~e~~~~~~L~~~~----~---~~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~~~~kL~DfG~~ 215 (353)
T PLN00034 145 -GEIQVLLEFMDGGSLEGTH----I---ADEQFLADVARQILSGIAYLHR-RHIVHRDIKPSNLLINSAKNVKIADFGVS 215 (353)
T ss_pred -CeEEEEEecCCCCcccccc----c---CCHHHHHHHHHHHHHHHHHHHH-CCEeecCCCHHHEEEcCCCCEEEcccccc
Confidence 4899999999 3554321 1 1233456679999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL---------- 246 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l---------- 246 (771)
......... .....++..|+|||++...... ....+.++|+|||||++|||++|..+|.....
T Consensus 216 ~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~-~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~ 288 (353)
T PLN00034 216 RILAQTMDP------CNSSVGTIAYMSPERINTDLNH-GAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAI 288 (353)
T ss_pred eeccccccc------ccccccCccccCcccccccccc-CcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHH
Confidence 766432110 0112344589999987542110 02334689999999999999999988852211
Q ss_pred ------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 247 ------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 247 ------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
.....++..+.+++.+||+.+|.+||++.++++| +||..
T Consensus 289 ~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h-p~~~~ 333 (353)
T PLN00034 289 CMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH-PFILR 333 (353)
T ss_pred hccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC-ccccc
Confidence 0113467789999999999999999999999998 56654
|
|
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-32 Score=299.97 Aligned_cols=244 Identities=17% Similarity=0.224 Sum_probs=190.8
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
.-+|++.+.||.|+ | .||.+.++.+++.|+||++............+.+|+.+++.++||||+++++++......
T Consensus 16 ~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-- 91 (355)
T cd07874 16 LKRYQNLKPIGSGAQG--IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSL-- 91 (355)
T ss_pred hhceeEEEEeeecCCE--EEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccc--
Confidence 34799999999998 8 999999999999999999986544445566778899999999999999999998653210
Q ss_pred CcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 97 ~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
.....+|+||||+ +.|...+... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 92 ~~~~~~~lv~e~~~~~l~~~~~~~-----l~~~~~~~~~~qi~~aL~~LH~-~givHrDikp~Nill~~~~~~kl~Dfg~ 165 (355)
T cd07874 92 EEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGL 165 (355)
T ss_pred cccceeEEEhhhhcccHHHHHhhc-----CCHHHHHHHHHHHHHHHHHHHh-CCcccCCCChHHEEECCCCCEEEeeCcc
Confidence 1134689999999 5677666532 2234466679999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh--------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~-------- 247 (771)
++...... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 166 ~~~~~~~~-------~~~~~~~t~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~ 232 (355)
T cd07874 166 ARTAGTSF-------MMTPYVVTRYYRAPEVILG------MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE 232 (355)
T ss_pred cccCCCcc-------ccCCccccCCccCHHHHcC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 97654321 1112344568999999876 35678999999999999999999887532100
Q ss_pred c----------------------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 248 N----------------------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 248 ~----------------------------------------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
. ....+..+.+++.+||..+|.+||++.++++|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h- 311 (355)
T cd07874 233 QLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH- 311 (355)
T ss_pred HhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC-
Confidence 0 00112346789999999999999999999999
Q ss_pred CCCc
Q 004157 282 EYFQ 285 (771)
Q Consensus 282 ~fF~ 285 (771)
+||+
T Consensus 312 p~~~ 315 (355)
T cd07874 312 PYIN 315 (355)
T ss_pred cchh
Confidence 4543
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=304.58 Aligned_cols=245 Identities=15% Similarity=0.208 Sum_probs=192.5
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.|++.+.||.|+ | +||+|+++.+|+.|+||++.+... .......+++|+.+|+.++||||+++++.+++.
T Consensus 2 ~y~~~~~lG~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~------ 73 (364)
T cd05599 2 DFESIKVIGRGAFG--EVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDE------ 73 (364)
T ss_pred CceEEEEEEecCCE--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcC------
Confidence 599999999998 8 999999999999999999985321 223456688999999999999999999999863
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
.++||||||| ++|.+++..... .....+.+++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~E~~~~g~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~~lH~-~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 147 (364)
T cd05599 74 --NYLYLIMEYLPGGDMMTLLMKKDT---FTEEETRFYIAETILAIDSIHK-LGYIHRDIKPDNLLLDAKGHIKLSDFGL 147 (364)
T ss_pred --CeEEEEECCCCCcHHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeEeccCCHHHeEECCCCCEEEeeccc
Confidence 4899999999 579988876543 2344567779999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCC-----------------C---------------ccccccccCCCCCChhccccccccccCCCCCcch
Q 004157 176 LSEFDGNNEAANG-----------------P---------------MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSID 223 (771)
Q Consensus 176 a~~~~~~~~~~~~-----------------~---------------~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~D 223 (771)
+..+......... + ...+..+++..|+|||++.. ..++.++|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~D 221 (364)
T cd05599 148 CTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQ------TGYNKECD 221 (364)
T ss_pred ceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcC------CCCCCeee
Confidence 8765322110000 0 00111234558999999865 45778999
Q ss_pred HHHHHHHHHHHhhCCCCCChhhhh----------c------cCCCCcchHHHHHHHhccCCCCCCC---hHHHhhCCCCC
Q 004157 224 SWGLGCLIYELFSGMRLSKTEELR----------N------TASIPKSLLPDYQRLLSSMPSRRLN---SSKLIENSEYF 284 (771)
Q Consensus 224 i~SLG~li~el~~g~~p~~~~~l~----------~------~~~IP~~l~~~i~~lL~~~P~~Rps---~~~lL~~~~fF 284 (771)
+|||||++|||++|..||...... . ...+++.+.+++.+||. +|.+|++ +.++++| +||
T Consensus 222 iwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h-~~~ 299 (364)
T cd05599 222 WWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH-PFF 299 (364)
T ss_pred eecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC-CCc
Confidence 999999999999999988543211 0 11356678899999996 8999998 9999998 566
Q ss_pred cc
Q 004157 285 QN 286 (771)
Q Consensus 285 ~n 286 (771)
..
T Consensus 300 ~~ 301 (364)
T cd05599 300 KG 301 (364)
T ss_pred CC
Confidence 54
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-32 Score=310.11 Aligned_cols=238 Identities=18% Similarity=0.185 Sum_probs=189.8
Q ss_pred CceecCCCCCCC-CceEEEEeEECCC-CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDD-GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~-g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.|.+.+.+|.|+ | .||.|.+..+ ++.|++|.+... .......+++|+++|+.++||||+++++.++.+
T Consensus 68 ~y~~~~~lg~G~~g--~vy~a~~~~~~~~~vv~K~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~------ 137 (478)
T PTZ00267 68 MYVLTTLVGRNPTT--AAFVATRGSDPKEKVVAKFVMLN--DERQAAYARSELHCLAACDHFGIVKHFDDFKSD------ 137 (478)
T ss_pred eEEEEEEEEeCCCc--EEEEEEEcCCCCeEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEEC------
Confidence 499999999997 7 8999999888 788999987543 233456788999999999999999999999874
Q ss_pred cccEEEEEecCC--cchHHHHHHhC-CCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELG-LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~-~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
.++||||||+ ++|.++|+... .........+.+++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 138 --~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~-~~ivHrDlkp~NIll~~~~~~kL~DFg 214 (478)
T PTZ00267 138 --DKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHS-RKMMHRDLKSANIFLMPTGIIKLGDFG 214 (478)
T ss_pred --CEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh-CCEEECCcCHHhEEECCCCcEEEEeCc
Confidence 4899999999 57998886532 11122344567779999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------- 247 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------- 247 (771)
++......... .......++..|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 215 la~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~------~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~ 284 (478)
T PTZ00267 215 FSKQYSDSVSL----DVASSFCGTPYYLAPELWER------KRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVL 284 (478)
T ss_pred CceecCCcccc----ccccccCCCccccCHhHhCC------CCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 99876542110 01112234558999999876 35678999999999999999999887543211
Q ss_pred --c----cCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 --N----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 --~----~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
. ...++..+.+++.+||..+|..||++.+++.+
T Consensus 285 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 285 YGKYDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred hCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence 1 12456779999999999999999999999987
|
|
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-32 Score=299.66 Aligned_cols=243 Identities=18% Similarity=0.229 Sum_probs=190.1
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.+|++.+.||.|+ | .||.|.++.+++.|+||++............+.+|+.+++.++||||+++++++...... .
T Consensus 24 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~--~ 99 (364)
T cd07875 24 KRYQNLKPIGSGAQG--IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL--E 99 (364)
T ss_pred cceeEEEEeecCCCe--EEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccc--c
Confidence 4799999999998 8 999999999999999999986544444556778899999999999999999988643210 0
Q ss_pred cccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
....+|+||||+ +.|...+... .....+.+++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 100 ~~~~~~lv~e~~~~~l~~~~~~~-----~~~~~~~~~~~qi~~aL~~LH~-~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 173 (364)
T cd07875 100 EFQDVYIVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLA 173 (364)
T ss_pred ccCeEEEEEeCCCCCHHHHHHhc-----CCHHHHHHHHHHHHHHHHHHhh-CCeecCCCCHHHEEECCCCcEEEEeCCCc
Confidence 124689999999 5677776532 2234466779999999999996 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh--------hc
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--------RN 248 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l--------~~ 248 (771)
+...... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||...+. ..
T Consensus 174 ~~~~~~~-------~~~~~~~t~~y~aPE~~~~------~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~ 240 (364)
T cd07875 174 RTAGTSF-------MMTPYVVTRYYRAPEVILG------MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 240 (364)
T ss_pred cccCCCC-------cccCCcccCCcCCHHHHhC------CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 7654321 1112344568999999876 3567899999999999999999988753210 00
Q ss_pred c----------------------------------------------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 249 T----------------------------------------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 249 ~----------------------------------------------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
. ......+.+++.+||..||.+|||+.++|+| +
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h-p 319 (364)
T cd07875 241 LGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH-P 319 (364)
T ss_pred cCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC-c
Confidence 0 0012346789999999999999999999999 4
Q ss_pred CCc
Q 004157 283 YFQ 285 (771)
Q Consensus 283 fF~ 285 (771)
||+
T Consensus 320 ~~~ 322 (364)
T cd07875 320 YIN 322 (364)
T ss_pred ccc
Confidence 553
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-32 Score=298.33 Aligned_cols=234 Identities=16% Similarity=0.228 Sum_probs=185.4
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEE
Q 004157 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIY 103 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iy 103 (771)
.||.|+ | +||.+.++.+|+.|+||++.+... .......+.+|+++++.++||||+++++.++.+ ..+|
T Consensus 2 ~lG~G~~g--~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--------~~~~ 71 (328)
T cd05593 2 LLGKGTFG--KVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTK--------DRLC 71 (328)
T ss_pred eeeeCCCE--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcC--------CEEE
Confidence 577787 7 999999999999999999986422 223456678899999999999999999999863 4899
Q ss_pred EEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCC
Q 004157 104 IVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (771)
Q Consensus 104 IVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~ 181 (771)
|||||+ ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++.....
T Consensus 72 lv~Ey~~~g~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~~LH~-~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~ 147 (328)
T cd05593 72 FVMEYVNGGELFFHLSRERV---FSEDRTRFYGAEIVSALDYLHS-GKIVYRDLKLENLMLDKDGHIKITDFGLCKEGIT 147 (328)
T ss_pred EEEeCCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeEecccCHHHeEECCCCcEEEecCcCCccCCC
Confidence 999999 478888766542 2344456679999999999996 8999999999999999999999999999875432
Q ss_pred CCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh------------cc
Q 004157 182 NNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------------NT 249 (771)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------------~~ 249 (771)
... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||...... ..
T Consensus 148 ~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p 215 (328)
T cd05593 148 DAA------TMKTFCGTPEYLAPEVLED------NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFP 215 (328)
T ss_pred ccc------ccccccCCcCccChhhhcC------CCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCC
Confidence 110 0112234558999999875 35678999999999999999999988543211 11
Q ss_pred CCCCcchHHHHHHHhccCCCCCC-----ChHHHhhCCCCCcc
Q 004157 250 ASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENSEYFQN 286 (771)
Q Consensus 250 ~~IP~~l~~~i~~lL~~~P~~Rp-----s~~~lL~~~~fF~n 286 (771)
..++..+.+++.+||..+|.+|+ ++.++++| .||.+
T Consensus 216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h-~~~~~ 256 (328)
T cd05593 216 RTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH-SFFTG 256 (328)
T ss_pred CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC-CCcCC
Confidence 34567789999999999999997 89999998 55644
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-32 Score=310.07 Aligned_cols=255 Identities=19% Similarity=0.200 Sum_probs=200.3
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
...+|++.+.||.|+ | +||.|+++.+|+.||||++............+.+|+..+..++|+||+++++.+.......
T Consensus 30 ~~~rY~i~~~LG~G~fG--~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 30 QAKKYWISRVLGSGATG--TVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred cCCCEEEEEEEecCCCE--EEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 346899999999998 8 9999999999999999999876655556677889999999999999999998876432211
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCC-CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
......+|+||||+ ++|.++|+.... ........+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~-~~IiHrDLKP~NILl~~~~~vkL~D 186 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHS-KHMIHRDIKSANILLCSNGLVKLGD 186 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEEeCCCCEEEEe
Confidence 11122579999999 579998876432 1223344567779999999999996 8999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-----
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----- 247 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~----- 247 (771)
||+++.+....... ......++..|+|||++.+ ..++.++|+|||||++|||++|..||......
T Consensus 187 FGls~~~~~~~~~~----~~~~~~Gt~~Y~aPE~~~~------~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~ 256 (496)
T PTZ00283 187 FGFSKMYAATVSDD----VGRTFCGTPYYVAPEIWRR------KPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHK 256 (496)
T ss_pred cccCeecccccccc----ccccccCCcceeCHHHhCC------CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence 99987654321110 0112234558999999876 35678999999999999999999988653321
Q ss_pred --------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 --------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 --------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
....++..+.+++.+||+.+|.+||++.++++| +++.
T Consensus 257 ~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~-p~~~ 301 (496)
T PTZ00283 257 TLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM-PICK 301 (496)
T ss_pred HhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC-HHHH
Confidence 113467789999999999999999999999998 4443
|
|
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-31 Score=285.29 Aligned_cols=241 Identities=18% Similarity=0.274 Sum_probs=193.3
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.||.|. | .||+|+++.+|+.|+||++......+.....+.+|+..+++++||||+++++++...
T Consensus 1 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------- 71 (286)
T cd07832 1 RYKILGRIGEGAHG--IVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHG------- 71 (286)
T ss_pred CceEEeecccCCCc--EEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecC-------
Confidence 589999999998 8 899999999999999999987654445566788999999999999999999999863
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
..+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++|+||+|+||+++.+|.++|+|||++.
T Consensus 72 -~~~~~v~e~~~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~ 147 (286)
T cd07832 72 -SGFVLVMEYMPSDLSEVLRDEER--PLPEAQVKSYMRMLLKGVAYMHA-NGIMHRDLKPANLLISADGVLKIADFGLAR 147 (286)
T ss_pred -CeeEEEecccCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH-CCeecCCcCHHHEEEcCCCcEEEeeeeecc
Confidence 4899999999 579888876442 12344466679999999999996 899999999999999999999999999988
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-----------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----------- 246 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----------- 246 (771)
........ .......+..|+|||++.+. ..++.++|+|||||++|+|++|.+++.....
T Consensus 148 ~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~ 217 (286)
T cd07832 148 LFSEEEPR-----LYSHQVATRWYRAPELLYGA-----RKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTL 217 (286)
T ss_pred cccCCCCC-----ccccccCcccccCceeeecc-----ccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHc
Confidence 76542210 01112344589999987643 3456799999999999999999877643210
Q ss_pred -------------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCC
Q 004157 247 -------------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEY 283 (771)
Q Consensus 247 -------------------------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~f 283 (771)
.....++..+.+++++||+.+|.+||++.++++|++|
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~ 285 (286)
T cd07832 218 GTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYF 285 (286)
T ss_pred CCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCc
Confidence 0012456778899999999999999999999999654
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=298.38 Aligned_cols=237 Identities=17% Similarity=0.217 Sum_probs=202.2
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
+...|+..+.||.|. | .||+|.+..+++.||||+++.....+ ..+.+..|+..|..++||||.++|..+..
T Consensus 11 ~~~~~~~~~~IgrGsfG--~Vyk~~d~~t~k~vAiKii~Le~~~d-eIediqqei~~Ls~~~~~~it~yygsyl~----- 82 (467)
T KOG0201|consen 11 PELLYTKLELIGRGSFG--EVYKAIDNKTKKVVAIKIIDLEEAED-EIEDIQQEISVLSQCDSPNITEYYGSYLK----- 82 (467)
T ss_pred cccccccchhccccccc--eeeeeeeccccceEEEEEechhhcch-hhHHHHHHHHHHHhcCcchHHhhhhheee-----
Confidence 456799999999999 9 99999999999999999999875554 46778899999999999999999999987
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
++.++|+|||| +++.+.|+..... .+..|.+++++++.||.|||. .+.+|||||+.||+|...|.+||+||
T Consensus 83 ---g~~LwiiMey~~gGsv~~lL~~~~~~---~E~~i~~ilre~l~~l~ylH~-~~kiHrDIKaanil~s~~g~vkl~Df 155 (467)
T KOG0201|consen 83 ---GTKLWIIMEYCGGGSVLDLLKSGNIL---DEFEIAVILREVLKGLDYLHS-EKKIHRDIKAANILLSESGDVKLADF 155 (467)
T ss_pred ---cccHHHHHHHhcCcchhhhhccCCCC---ccceeeeehHHHHHHhhhhhh-cceecccccccceeEeccCcEEEEec
Confidence 45899999999 5788888876653 233467779999999999997 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh-hhhccC--
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-ELRNTA-- 250 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~-~l~~~~-- 250 (771)
|++..+... ...+..+++++.|||||++++ ..|..++||||||++.+||.+|.||+... .++-+.
T Consensus 156 gVa~ql~~~------~~rr~tfvGTPfwMAPEVI~~------~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflI 223 (467)
T KOG0201|consen 156 GVAGQLTNT------VKRRKTFVGTPFWMAPEVIKQ------SGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLI 223 (467)
T ss_pred ceeeeeech------hhccccccccccccchhhhcc------ccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEec
Confidence 999888763 233456777789999999996 57889999999999999999999987542 233222
Q ss_pred ----------CCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 251 ----------SIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 251 ----------~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
...+.+.+++..||+.||+.||++.++|+|
T Consensus 224 pk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 224 PKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred cCCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 344568999999999999999999999998
|
|
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=299.41 Aligned_cols=247 Identities=15% Similarity=0.153 Sum_probs=194.6
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.|++.+.||.|+ | +||++.++.+|+.|+||++.+... .......+++|+++++.++||||+++++.++..
T Consensus 2 ~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~------ 73 (330)
T cd05601 2 DFDVKSLVGRGHFG--EVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDK------ 73 (330)
T ss_pred CceEEEEEEeccCE--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecC------
Confidence 599999999998 8 999999999999999999986432 223456788999999999999999999998863
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+||||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~qi~~aL~~lH~-~~i~H~Dlkp~NIll~~~~~~kL~Dfg~ 148 (330)
T cd05601 74 --DNLYLVMEYQPGGDLLSLLNRYED--QFDEDMAQFYLAELVLAIHSVHQ-MGYVHRDIKPENVLIDRTGHIKLADFGS 148 (330)
T ss_pred --CeEEEEECCCCCCCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH-CCeEcccCchHheEECCCCCEEeccCCC
Confidence 4899999999 579999877521 12344566679999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h----
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R---- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~---- 247 (771)
+........ .......++..|+|||++..........++.++|+|||||++|+|++|..||..... .
T Consensus 149 a~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~ 223 (330)
T cd05601 149 AARLTANKM-----VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMN 223 (330)
T ss_pred CeECCCCCc-----eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHc
Confidence 987653211 111112344589999998642111123566889999999999999999998854221 1
Q ss_pred --------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 --------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 --------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....++..+.+++++||. +|.+|+++.+++.| +||..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h-~~~~~ 268 (330)
T cd05601 224 FQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH-PFFSK 268 (330)
T ss_pred CCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC-CCcCC
Confidence 112456778999999998 99999999999998 56654
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-31 Score=282.03 Aligned_cols=240 Identities=14% Similarity=0.184 Sum_probs=190.8
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch---hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD---GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~---~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
+|++++.+|.|+ | .||.|.+..++++|+||.+....... .....+++|++++++++||||++++++++.+
T Consensus 3 ~~~~~~~lg~g~~~--~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---- 76 (263)
T cd06625 3 NWRRGKLLGQGAFG--RVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDD---- 76 (263)
T ss_pred cccccceecCCCce--EEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccC----
Confidence 599999999998 8 89999999999999999987543222 2356788999999999999999999999864
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+|+|+||+ +.|.+++..... .....+..+++||+.||.|||+ .+++||||+|+||+++.+|.+||+||
T Consensus 77 ----~~~~~v~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~l~~~l~~lH~-~~i~H~dl~p~nilv~~~~~~~l~df 148 (263)
T cd06625 77 ----ETLSIFMEYMPGGSVKDQLKAYGA---LTETVTRKYTRQILEGVEYLHS-NMIVHRDIKGANILRDSAGNVKLGDF 148 (263)
T ss_pred ----CeEEEEEEECCCCcHHHHHHHhCC---CCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCCCEEEeec
Confidence 3899999999 468888876543 2334456669999999999996 99999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------ 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------ 247 (771)
|++............ .........|+|||++.+. .++.++|+|||||++|++++|..||...+..
T Consensus 149 g~~~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~ 219 (263)
T cd06625 149 GASKRLQTICSSGTG---MKSVTGTPYWMSPEVISGE------GYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKI 219 (263)
T ss_pred ccceecccccccccc---ccCCCcCccccCcceeccC------CCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHH
Confidence 998765431110000 0112234589999998763 4668999999999999999999887542110
Q ss_pred --------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 248 --------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 248 --------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
....++..+.+++.+||..+|.+||++.++++|.+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~ 262 (263)
T cd06625 220 ATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFF 262 (263)
T ss_pred hccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCC
Confidence 11245677889999999999999999999999854
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-32 Score=298.09 Aligned_cols=242 Identities=17% Similarity=0.263 Sum_probs=189.0
Q ss_pred CceecCCCCCCC-CceEEEEeEEC---CCCCcEEEEEEeCCCC--chhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSK---DDGSPVSIFSISGTNA--QDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVEN 92 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k---~~g~~VaIK~~~~~~~--~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~ 92 (771)
+|++.+.||.|+ | +||.+++. .+|..|+||++.+... .....+.+.+|+++|+.++ ||||++++++++.+
T Consensus 1 ~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~- 77 (332)
T cd05614 1 NFELLKVLGTGAYG--KVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTE- 77 (332)
T ss_pred CceEEEEEeecCCE--EEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecC-
Confidence 489999999998 8 88887764 5789999999975321 2234566788999999995 99999999998864
Q ss_pred cCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEE
Q 004157 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL 170 (771)
..+|+||||+ ++|.+++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||
T Consensus 78 -------~~~~lv~e~~~~g~L~~~l~~~~~~---~~~~~~~~~~qi~~~l~~lH~-~~ivHrDlkp~Nili~~~~~~kl 146 (332)
T cd05614 78 -------AKLHLILDYVSGGEMFTHLYQRDNF---SEDEVRFYSGEIILALEHLHK-LGIVYRDIKLENILLDSEGHVVL 146 (332)
T ss_pred -------CEEEEEEeCCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCcEecCCCHHHeEECCCCCEEE
Confidence 3899999999 5798888765432 234466679999999999996 89999999999999999999999
Q ss_pred EccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-----
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----- 245 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----- 245 (771)
+|||++......... ......++..|+|||++.+. ..++.++|+|||||++|||++|..||....
T Consensus 147 ~DfG~~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~-----~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~ 216 (332)
T cd05614 147 TDFGLSKEFLSEEKE-----RTYSFCGTIEYMAPEIIRGK-----GGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQ 216 (332)
T ss_pred eeCcCCccccccCCC-----ccccccCCccccCHHHhcCC-----CCCCCccccccchhhhhhhhcCCCCCCCCCCCCCH
Confidence 999998765432111 11223445689999998753 235678999999999999999998884311
Q ss_pred --h-----h----ccCCCCcchHHHHHHHhccCCCCCC-----ChHHHhhCCCCCcc
Q 004157 246 --L-----R----NTASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENSEYFQN 286 (771)
Q Consensus 246 --l-----~----~~~~IP~~l~~~i~~lL~~~P~~Rp-----s~~~lL~~~~fF~n 286 (771)
. . ....++..+.+++.+||+.+|++|+ ++.++++| +||++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h-~~~~~ 272 (332)
T cd05614 217 SEVSRRILKCDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH-PFFKG 272 (332)
T ss_pred HHHHHHHhcCCCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC-CCcCC
Confidence 0 0 0124667789999999999999999 78899998 56654
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-32 Score=298.26 Aligned_cols=243 Identities=17% Similarity=0.281 Sum_probs=190.3
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.+|++.+.||.|+ | +||+|.++.+++.|+||++............+.+|+++|++++||||+++++++...... .
T Consensus 15 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~--~ 90 (343)
T cd07878 15 ERYQNLTPVGSGAYG--SVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSI--E 90 (343)
T ss_pred hhhhhheecccCCCe--EEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccc--c
Confidence 4799999999998 8 999999999999999999976533333455677899999999999999999988643211 1
Q ss_pred cccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
....+|+++|++ ++|..+++...+ ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 91 ~~~~~~~~~~~~~~~l~~~~~~~~l----~~~~~~~i~~qi~~aL~~LH~-~~ivHrdikp~Nil~~~~~~~kl~Dfg~~ 165 (343)
T cd07878 91 NFNEVYLVTNLMGADLNNIVKCQKL----SDEHVQFLIYQLLRGLKYIHS-AGIIHRDLKPSNVAVNEDCELRILDFGLA 165 (343)
T ss_pred ccCcEEEEeecCCCCHHHHHhcCCC----CHHHHHHHHHHHHHHHHHHHH-CCeecccCChhhEEECCCCCEEEcCCccc
Confidence 124689999999 468777764432 344567779999999999996 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h-----
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R----- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~----- 247 (771)
...... .....++..|+|||++.+. ..++.++|+|||||++|+|++|..||..... .
T Consensus 166 ~~~~~~---------~~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~ 231 (343)
T cd07878 166 RQADDE---------MTGYVATRWYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEV 231 (343)
T ss_pred eecCCC---------cCCccccccccCchHhcCC-----ccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
Confidence 865431 1122445689999998652 3466789999999999999999988753210 0
Q ss_pred ----------------------cc------------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 ----------------------NT------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 ----------------------~~------------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
.+ ...++.+.+++.+||..+|.+||++.++++| +||.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h-p~~~ 302 (343)
T cd07878 232 VGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH-PYFS 302 (343)
T ss_pred hCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC-cchh
Confidence 00 1223346788999999999999999999999 4553
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-32 Score=289.45 Aligned_cols=243 Identities=19% Similarity=0.273 Sum_probs=191.4
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
-..|++.++||.|+ | .||+|+++.+++.|+||.+...... .....+.+|+++++.|+||||++++++++.+
T Consensus 5 ~~~y~~~~~lg~g~~g--~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~----- 76 (301)
T cd07873 5 LETYIKLDKLGEGTYA--TVYKGRSKLTDNLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIIHTE----- 76 (301)
T ss_pred ccceEEeeEeccCcCE--EEEEEEEcCCCcEEEEEEEeccccc-CchhHHHHHHHHHHhcCCCCcceEEEEEecC-----
Confidence 35699999999998 7 9999999999999999999754332 2234567899999999999999999999864
Q ss_pred CcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 97 ~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+|+||||+ ++|..++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 77 ---~~~~lv~e~~~~~l~~~l~~~~~--~~~~~~~~~~~~qi~~aL~~lH~-~~i~H~dlkp~Nil~~~~~~~kl~dfg~ 150 (301)
T cd07873 77 ---KSLTLVFEYLDKDLKQYLDDCGN--SINMHNVKLFLFQLLRGLNYCHR-RKVLHRDLKPQNLLINERGELKLADFGL 150 (301)
T ss_pred ---CeEEEEEeccccCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHh-CCeeCCCCCHHHEEECCCCcEEECcCcc
Confidence 4899999999 678887765432 12344566779999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh--------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~-------- 247 (771)
+......... ......+..|+|||++.+. ..++.++|+|||||++|+|++|.++|...+..
T Consensus 151 ~~~~~~~~~~------~~~~~~~~~y~~PE~~~~~-----~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~ 219 (301)
T cd07873 151 ARAKSIPTKT------YSNEVVTLWYRPPDILLGS-----TDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFR 219 (301)
T ss_pred hhccCCCCCc------ccccceeecccCcHHHhCC-----CCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 8765432110 1112334589999987653 34567899999999999999999887532110
Q ss_pred ----------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 ----------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 ----------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||..+|.+||++.++++| +||+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h-~~f~~ 291 (301)
T cd07873 220 ILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH-PYFHC 291 (301)
T ss_pred HcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC-ccccc
Confidence 001356677899999999999999999999998 56644
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=299.41 Aligned_cols=235 Identities=16% Similarity=0.220 Sum_probs=185.8
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEE
Q 004157 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIY 103 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iy 103 (771)
.||.|+ | +||.++++.+|+.|+||++.+... .......+.+|+++++.++||||+++++.++.. ..+|
T Consensus 2 ~lG~G~~g--~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~--------~~~~ 71 (325)
T cd05594 2 LLGKGTFG--KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTH--------DRLC 71 (325)
T ss_pred eeeeCCCE--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcC--------CEEE
Confidence 578887 8 999999999999999999986422 123345667899999999999999999999864 4899
Q ss_pred EEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCC
Q 004157 104 IVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (771)
Q Consensus 104 IVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~ 181 (771)
|||||+ ++|..++..... .....+..++.||+.||.|||+..+++||||||+||+++.+|.+||+|||++.....
T Consensus 72 lv~E~~~~~~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~ 148 (325)
T cd05594 72 FVMEYANGGELFFHLSRERV---FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 148 (325)
T ss_pred EEEeCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCC
Confidence 999999 478888766543 234446667999999999999647999999999999999999999999999875432
Q ss_pred CCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh------------cc
Q 004157 182 NNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------------NT 249 (771)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------------~~ 249 (771)
... . .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||...... ..
T Consensus 149 ~~~----~--~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p 216 (325)
T cd05594 149 DGA----T--MKTFCGTPEYLAPEVLED------NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP 216 (325)
T ss_pred CCc----c--cccccCCcccCCHHHHcc------CCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCC
Confidence 111 0 111234558999999876 35678999999999999999999888543211 11
Q ss_pred CCCCcchHHHHHHHhccCCCCCC-----ChHHHhhCCCCCcc
Q 004157 250 ASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENSEYFQN 286 (771)
Q Consensus 250 ~~IP~~l~~~i~~lL~~~P~~Rp-----s~~~lL~~~~fF~n 286 (771)
..++..+.+++.+||..+|.+|+ ++.++++| .||.+
T Consensus 217 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h-~~~~~ 257 (325)
T cd05594 217 RTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH-KFFAG 257 (325)
T ss_pred CCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC-CCcCC
Confidence 34677889999999999999997 89999998 56654
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-32 Score=288.62 Aligned_cols=240 Identities=17% Similarity=0.243 Sum_probs=188.3
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.+|.|. | +||+|+++.+|+.|++|.+............+.+|++.++.++||||+++++++...
T Consensus 1 ~y~~~~~l~~g~~~--~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~------- 71 (284)
T cd07839 1 KYEKLEKIGEGTYG--TVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSD------- 71 (284)
T ss_pred CceeEEEecccCCe--EEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccC-------
Confidence 589999999987 7 999999999999999999986544333445677899999999999999999999863
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
..+|+|+||+ ++|..++..... ......+..++.||++||.|||+ .+++||||+|+||+++.+|.+||+|||++.
T Consensus 72 -~~~~lv~e~~~~~l~~~~~~~~~--~~~~~~~~~~~~qi~~al~~LH~-~~i~H~dl~~~nil~~~~~~~~l~dfg~~~ 147 (284)
T cd07839 72 -KKLTLVFEYCDQDLKKYFDSCNG--DIDPEIVKSFMFQLLKGLAFCHS-HNVLHRDLKPQNLLINKNGELKLADFGLAR 147 (284)
T ss_pred -CceEEEEecCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH-CCEecCCCCHHHEEEcCCCcEEECccchhh
Confidence 4899999999 678877765321 13345566779999999999996 899999999999999999999999999987
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCC-Chhhh----------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLS-KTEEL---------- 246 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~-~~~~l---------- 246 (771)
........ .........|+|||++.+. ..++.++|+|||||++|+|++|..|+ ...+.
T Consensus 148 ~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~ 216 (284)
T cd07839 148 AFGIPVRC------YSAEVVTLWYRPPDVLFGA-----KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRL 216 (284)
T ss_pred ccCCCCCC------cCCCccccCCcChHHHhCC-----cccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHH
Confidence 65432110 0112334589999987653 34567899999999999999987663 21110
Q ss_pred -------------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCC
Q 004157 247 -------------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEY 283 (771)
Q Consensus 247 -------------------------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~f 283 (771)
.....++..+.+++++||..+|.+|||+.++++|+||
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 217 LGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred hCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 0012355677899999999999999999999998543
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-31 Score=291.80 Aligned_cols=249 Identities=14% Similarity=0.149 Sum_probs=190.0
Q ss_pred eecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCccc
Q 004157 22 NIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKI 100 (771)
Q Consensus 22 ~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~ 100 (771)
++.+.||.|. +.++||.++++.+|+.|+||+++.....+.....+++|+++++.++||||+++++++..+ .
T Consensus 1 ~~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~--------~ 72 (327)
T cd08227 1 ELLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIAD--------N 72 (327)
T ss_pred ChhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEEC--------C
Confidence 3567889886 566999999999999999999987655555667888999999999999999999999874 4
Q ss_pred EEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccc
Q 004157 101 TIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (771)
Q Consensus 101 ~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~ 178 (771)
.+|+||||+ ++|.+++....... .....+.+++.||+.||.|||+ .+++||||||+||+++.+|.++++||+.+..
T Consensus 73 ~~~lv~e~~~~~~l~~~~~~~~~~~-l~~~~~~~i~~qi~~~L~~LH~-~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~ 150 (327)
T cd08227 73 ELWVVTSFMAYGSAKDLICTHFMDG-MSELAIAYILQGVLKALDYIHH-MGYVHRSVKASHILISVDGKVYLSGLRSNLS 150 (327)
T ss_pred EEEEEEeccCCCcHHHHHHhhccCC-CCHHHHHHHHHHHHHHHHHHHH-CCEecCCCChhhEEEecCCcEEEcccchhhc
Confidence 899999999 57988887643221 2345567789999999999996 8999999999999999999999999987654
Q ss_pred cCCCCCCCC--CCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc--------
Q 004157 179 FDGNNEAAN--GPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN-------- 248 (771)
Q Consensus 179 ~~~~~~~~~--~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~-------- 248 (771)
......... ... ......+..|+|||++.+.. ..++.++|+|||||++|||++|..||.......
T Consensus 151 ~~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~----~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~ 225 (327)
T cd08227 151 MINHGQRLRVVHDF-PKYSVKVLPWLSPEVLQQNL----QGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNG 225 (327)
T ss_pred cccccccccccccc-cccccceecccChHHhhccc----CCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcC
Confidence 432111000 000 01112334799999986531 246678999999999999999998875211000
Q ss_pred --------------------------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHh
Q 004157 249 --------------------------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLI 278 (771)
Q Consensus 249 --------------------------------------------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL 278 (771)
...++..+.+++.+||+.+|.+||++.+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell 305 (327)
T cd08227 226 TVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLL 305 (327)
T ss_pred CccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHh
Confidence 001234577899999999999999999999
Q ss_pred hCCCCCcc
Q 004157 279 ENSEYFQN 286 (771)
Q Consensus 279 ~~~~fF~n 286 (771)
+| +||++
T Consensus 306 ~~-p~f~~ 312 (327)
T cd08227 306 NH-SFFKQ 312 (327)
T ss_pred cC-hhhhh
Confidence 98 55544
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-32 Score=302.43 Aligned_cols=246 Identities=11% Similarity=0.149 Sum_probs=190.1
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.|++.+.||.|+ | +||+|+++.+++.|+||++.+... .......+++|++++++++||||+++++.+++.
T Consensus 2 ~f~~~~~LG~G~~g--~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~------ 73 (381)
T cd05626 2 MFVKIKTLGIGAFG--EVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDK------ 73 (381)
T ss_pred CceEEEEEeecCCE--EEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecC------
Confidence 489999999998 8 999999999999999999986432 234566789999999999999999999999863
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
.++|+||||| ++|.+++...... ....+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~E~~~gg~L~~~l~~~~~~---~e~~~~~~~~qi~~aL~~LH~-~givHrDlKp~Nili~~~~~~kL~DFGl 147 (381)
T cd05626 74 --DNLYFVMDYIPGGDMMSLLIRMEVF---PEVLARFYIAELTLAIESVHK-MGFIHRDIKPDNILIDLDGHIKLTDFGL 147 (381)
T ss_pred --CEEEEEEecCCCCcHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHh-CCeeecCCcHHHEEECCCCCEEEeeCcC
Confidence 4899999999 4799988775432 334466678999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCC-----------------------------------------CCCccccccccCCCCCChhccccccccc
Q 004157 176 LSEFDGNNEAA-----------------------------------------NGPMLQYAWLVGAQYKPVELAKSDWTAV 214 (771)
Q Consensus 176 a~~~~~~~~~~-----------------------------------------~~~~~~~~~~~~~~Y~aPE~~~~~~~~~ 214 (771)
+..+....... ..........++..|+|||++.+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~----- 222 (381)
T cd05626 148 CTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLR----- 222 (381)
T ss_pred CcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcC-----
Confidence 86432110000 00000112234558999999875
Q ss_pred cCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-------h---c------cCCCCcchHHHHHHHhc--cCCCCCCChHH
Q 004157 215 RKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------R---N------TASIPKSLLPDYQRLLS--SMPSRRLNSSK 276 (771)
Q Consensus 215 ~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-------~---~------~~~IP~~l~~~i~~lL~--~~P~~Rps~~~ 276 (771)
..++.++|+|||||++|||++|..||..... . . ...++..+.+++.+|+. .++..|+++.+
T Consensus 223 -~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~ 301 (381)
T cd05626 223 -KGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADD 301 (381)
T ss_pred -CCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHH
Confidence 3567899999999999999999998853221 0 0 12356678899998664 45556999999
Q ss_pred HhhCCCCCcc
Q 004157 277 LIENSEYFQN 286 (771)
Q Consensus 277 lL~~~~fF~n 286 (771)
++.| +||..
T Consensus 302 ~l~h-p~f~~ 310 (381)
T cd05626 302 IKAH-PFFSE 310 (381)
T ss_pred HhcC-cccCC
Confidence 9998 66654
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-32 Score=301.59 Aligned_cols=246 Identities=14% Similarity=0.159 Sum_probs=194.3
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
...|++.+.||.|+ | +||+++++.+++.|+||++.+... .......+.+|+++++.++||||++++++++++
T Consensus 42 ~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~---- 115 (370)
T cd05596 42 AEDFDVIKVIGRGAFG--EVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDD---- 115 (370)
T ss_pred HHHcEEEEEEeeCCCE--EEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecC----
Confidence 34699999999998 8 999999999999999999975321 123345577899999999999999999999863
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
.++|+||||| ++|.+++..... ...++..++.||+.||.|||+ .+++||||||+||+++.+|.+||+||
T Consensus 116 ----~~~~lv~Ey~~gg~L~~~l~~~~l----~~~~~~~~~~qi~~aL~~LH~-~~ivHrDLkp~NILl~~~~~~kL~Df 186 (370)
T cd05596 116 ----KYLYMVMEYMPGGDLVNLMSNYDI----PEKWARFYTAEVVLALDAIHS-MGFIHRDVKPDNMLLDKSGHLKLADF 186 (370)
T ss_pred ----CEEEEEEcCCCCCcHHHHHHhcCC----CHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHEEEcCCCCEEEEec
Confidence 4899999999 579998876543 234566668999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----hc-
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN- 248 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~~- 248 (771)
|++........ .......++..|+|||++.+... ...++.++|+|||||++|||++|..||..... ..
T Consensus 187 G~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~--~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i 259 (370)
T cd05596 187 GTCMKMDANGM-----VRCDTAVGTPDYISPEVLKSQGG--DGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKI 259 (370)
T ss_pred cceeeccCCCc-----ccCCCCCCCcCeECHHHhccCCC--CCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHH
Confidence 99976643211 11122344568999999864210 12366799999999999999999999864321 11
Q ss_pred -----------cCCCCcchHHHHHHHhccCCCC--CCChHHHhhCCCCCcc
Q 004157 249 -----------TASIPKSLLPDYQRLLSSMPSR--RLNSSKLIENSEYFQN 286 (771)
Q Consensus 249 -----------~~~IP~~l~~~i~~lL~~~P~~--Rps~~~lL~~~~fF~n 286 (771)
...++..+.+++++||+.+|.+ |+++.++++| +||.+
T Consensus 260 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h-~~~~~ 309 (370)
T cd05596 260 MDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH-PFFKN 309 (370)
T ss_pred HcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC-cccCC
Confidence 1245678899999999999987 9999999999 56654
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.4e-33 Score=277.14 Aligned_cols=246 Identities=17% Similarity=0.253 Sum_probs=202.7
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc------hhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEe
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ------DGHLAAARNGVKRLRTVR-HPNILAFLHSTEV 90 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~------~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~ 90 (771)
..|+-.+.+|.|. + +|.++.++.+|...++|+++..... ...++.-++|+.+|+++. ||+|+++.|++++
T Consensus 17 ~~y~pkeilgrgvss--~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes 94 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSS--VVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES 94 (411)
T ss_pred hhcChHHHhcccchh--hhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC
Confidence 3688888898886 5 7899999999999999999853211 144667788999999986 9999999999997
Q ss_pred cccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcE
Q 004157 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDW 168 (771)
Q Consensus 91 e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~ 168 (771)
+ ..+++|+|.| +.|.++|...--..+.. ...++.|++.+++|||. .+||||||||+||+++++-++
T Consensus 95 ~--------sF~FlVFdl~prGELFDyLts~VtlSEK~---tR~iMrqlfegVeylHa-~~IVHRDLKpENILlddn~~i 162 (411)
T KOG0599|consen 95 D--------AFVFLVFDLMPRGELFDYLTSKVTLSEKE---TRRIMRQLFEGVEYLHA-RNIVHRDLKPENILLDDNMNI 162 (411)
T ss_pred c--------chhhhhhhhcccchHHHHhhhheeecHHH---HHHHHHHHHHHHHHHHH-hhhhhcccChhheeeccccce
Confidence 4 4889999999 78999998764333222 34449999999999996 899999999999999999999
Q ss_pred EEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh-hh-
Q 004157 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-EL- 246 (771)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~-~l- 246 (771)
||+|||+++.+..... -..-++++.|.|||.++..|.....+|+..+|+|++|++||.|+.|.+||... ++
T Consensus 163 ~isDFGFa~~l~~Gek-------LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQml 235 (411)
T KOG0599|consen 163 KISDFGFACQLEPGEK-------LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQML 235 (411)
T ss_pred EEeccceeeccCCchh-------HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHH
Confidence 9999999998865321 12234556999999999999887788999999999999999999999988532 21
Q ss_pred --h------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 247 --R------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 247 --~------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
+ +...|.....+++.+||..+|.+|+|+.+.|.| +||..
T Consensus 236 MLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH-pff~q 288 (411)
T KOG0599|consen 236 MLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAH-PFFIQ 288 (411)
T ss_pred HHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC-hHHHH
Confidence 1 124678889999999999999999999999999 66644
|
|
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.3e-31 Score=277.97 Aligned_cols=238 Identities=16% Similarity=0.159 Sum_probs=192.5
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|++.+.++.|. | .||+|+++.+|+.|++|.+............+.+|+++++.++||||+++++.+...
T Consensus 1 ~~~~~~~l~~g~~~--~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------- 71 (256)
T cd08529 1 DFEILNKIGKGSFG--VVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDK------- 71 (256)
T ss_pred CceEeEEecCCCCe--EEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccC-------
Confidence 488889999986 6 999999999999999999986554555567788999999999999999999998863
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+|+||||+ ++|.+++..... .......+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+|||++
T Consensus 72 -~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~~l~~al~~lH~-~~i~h~dl~~~nili~~~~~~~l~df~~~ 148 (256)
T cd08529 72 -GKLNIVMEYAENGDLHKLLKMQRG-RPLPEDQVWRFFIQILLGLAHLHS-KKILHRDIKSLNLFLDAYDNVKIGDLGVA 148 (256)
T ss_pred -CEEEEEEEeCCCCcHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCcceEEEeCCCCEEEcccccc
Confidence 4899999999 579998877522 122344456678999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh---------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--------- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~--------- 247 (771)
........ ..........|+|||+..+ ..++.++|+|||||++|+|++|..||......
T Consensus 149 ~~~~~~~~------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 216 (256)
T cd08529 149 KLLSDNTN------FANTIVGTPYYLSPELCED------KPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRG 216 (256)
T ss_pred eeccCccc------hhhccccCccccCHHHhcC------CCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Confidence 86654211 0111233457999999876 34667899999999999999999887543210
Q ss_pred ---c-cCCCCcchHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 248 ---N-TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 248 ---~-~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
. ...++..+.+++.+|++.+|++||++.++++|.
T Consensus 217 ~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~ 254 (256)
T cd08529 217 VFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNP 254 (256)
T ss_pred CCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhCC
Confidence 0 124567899999999999999999999999984
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.9e-32 Score=285.26 Aligned_cols=252 Identities=15% Similarity=0.195 Sum_probs=200.5
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.|++.+.+|.|. | +||.+..+.++..+|+|++++.... ...+.++.-|-++|+.+.||-+..+|..|+++
T Consensus 78 ~f~llk~LG~GdiG--~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~------ 149 (459)
T KOG0610|consen 78 HFRLLKRLGCGDIG--TVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETD------ 149 (459)
T ss_pred HHHHHHHcCCCCce--eEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeecc------
Confidence 588899999999 9 9999999999999999999976433 24466788899999999999999999999985
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
.++|+||||| ++|..+++++.. ....+..+.+++..|+.||+|||. .|||+|||||+||+|-++|.+.|.||++
T Consensus 150 --~~~cl~meyCpGGdL~~LrqkQp~-~~fse~~aRFYaAEvl~ALEYLHm-lGivYRDLKPENILvredGHIMLsDFDL 225 (459)
T KOG0610|consen 150 --KYSCLVMEYCPGGDLHSLRQKQPG-KRFSESAARFYAAEVLLALEYLHM-LGIVYRDLKPENILVREDGHIMLSDFDL 225 (459)
T ss_pred --ceeEEEEecCCCccHHHHHhhCCC-CccchhhHHHHHHHHHHHHHHHHh-hceeeccCCcceeEEecCCcEEeeeccc
Confidence 4899999999 679887776542 223455577889999999999996 9999999999999999999999999999
Q ss_pred ccccCCCCC---------------------CCC---------------------------CC--ccccccccCCCCCChh
Q 004157 176 LSEFDGNNE---------------------AAN---------------------------GP--MLQYAWLVGAQYKPVE 205 (771)
Q Consensus 176 a~~~~~~~~---------------------~~~---------------------------~~--~~~~~~~~~~~Y~aPE 205 (771)
+........ ... .+ .....++++..|.|||
T Consensus 226 S~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPE 305 (459)
T KOG0610|consen 226 SLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPE 305 (459)
T ss_pred cccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccce
Confidence 853311000 000 00 0111233444899999
Q ss_pred ccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----hhcc----------CCCCcchHHHHHHHhccCCCCC
Q 004157 206 LAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LRNT----------ASIPKSLLPDYQRLLSSMPSRR 271 (771)
Q Consensus 206 ~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----l~~~----------~~IP~~l~~~i~~lL~~~P~~R 271 (771)
++.+ .+.+.++|.|.||+++|||+.|..||.... +.++ ..++..+.++|++||.+||.+|
T Consensus 306 vI~G------~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kR 379 (459)
T KOG0610|consen 306 VIRG------EGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKR 379 (459)
T ss_pred eeec------CCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhh
Confidence 9998 478899999999999999999999997543 2221 2345678999999999999999
Q ss_pred CC----hHHHhhCCCCCcchhhh
Q 004157 272 LN----SSKLIENSEYFQNKLVD 290 (771)
Q Consensus 272 ps----~~~lL~~~~fF~n~lv~ 290 (771)
+. ++++-+| +||+..-..
T Consensus 380 lg~~rGA~eIK~H-pFF~gVnWa 401 (459)
T KOG0610|consen 380 LGSKRGAAEIKRH-PFFEGVNWA 401 (459)
T ss_pred hccccchHHhhcC-ccccCCChh
Confidence 98 8888777 899764443
|
|
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.9e-32 Score=301.42 Aligned_cols=245 Identities=14% Similarity=0.220 Sum_probs=188.7
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
+|++.+.||.|+ | +||++.++.+|+.|+||++.+... .......+++|+++++.++||||+++++++++.
T Consensus 2 ~y~~~~~lG~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~------ 73 (377)
T cd05629 2 DFHTVKVIGKGAFG--EVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDA------ 73 (377)
T ss_pred CceEeEEEeecCCE--EEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcC------
Confidence 599999999998 8 999999999999999999875321 223456788999999999999999999999863
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
.++||||||| ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~E~~~gg~L~~~l~~~~~---~~~~~~~~~~~ql~~aL~~LH~-~givHrDlkp~NIll~~~~~~kl~DfGl 147 (377)
T cd05629 74 --QYLYLIMEFLPGGDLMTMLIKYDT---FSEDVTRFYMAECVLAIEAVHK-LGFIHRDIKPDNILIDRGGHIKLSDFGL 147 (377)
T ss_pred --CeeEEEEeCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHEEECCCCCEEEeeccc
Confidence 4899999999 579988876543 2344566679999999999996 9999999999999999999999999999
Q ss_pred ccccCCCCCC-----------CCCC------------------------------ccccccccCCCCCChhccccccccc
Q 004157 176 LSEFDGNNEA-----------ANGP------------------------------MLQYAWLVGAQYKPVELAKSDWTAV 214 (771)
Q Consensus 176 a~~~~~~~~~-----------~~~~------------------------------~~~~~~~~~~~Y~aPE~~~~~~~~~ 214 (771)
++.+...... .... .......++..|+|||++.+
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----- 222 (377)
T cd05629 148 STGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQ----- 222 (377)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHcc-----
Confidence 8643211000 0000 00011234558999999875
Q ss_pred cCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----hc------c------CCCCcchHHHHHHHhccCCCCC---CChH
Q 004157 215 RKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN------T------ASIPKSLLPDYQRLLSSMPSRR---LNSS 275 (771)
Q Consensus 215 ~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~~------~------~~IP~~l~~~i~~lL~~~P~~R---ps~~ 275 (771)
..++.++|+|||||++|||++|.+||..... .. . ..++..+.+++.+||. +|..| +++.
T Consensus 223 -~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~ 300 (377)
T cd05629 223 -QGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAH 300 (377)
T ss_pred -CCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHH
Confidence 4577899999999999999999998853221 11 1 1345668899999997 66655 5999
Q ss_pred HHhhCCCCCcc
Q 004157 276 KLIENSEYFQN 286 (771)
Q Consensus 276 ~lL~~~~fF~n 286 (771)
+++.| +||..
T Consensus 301 ~~l~h-p~~~~ 310 (377)
T cd05629 301 EIKSH-PFFRG 310 (377)
T ss_pred HHhcC-CCcCC
Confidence 99998 56654
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.7e-32 Score=293.02 Aligned_cols=240 Identities=18% Similarity=0.233 Sum_probs=188.3
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccCcC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d~~ 96 (771)
.|++.+.||.|+ | +||+|+++.+++.|+||++.+... .+........|.+++..+ +||+|++++++++..
T Consensus 1 df~~~~~lg~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~----- 73 (323)
T cd05616 1 DFNFLMVLGKGSFG--KVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTM----- 73 (323)
T ss_pred CceEEEEEeeCCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecC-----
Confidence 488999999998 8 999999999999999999986432 223345566788888877 488999999998763
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+||||||+ ++|..++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 74 ---~~~~lv~E~~~~g~L~~~~~~~~~~---~~~~~~~~~~qi~~aL~~LH~-~~ivHrDlkp~Nill~~~~~~kL~DfG 146 (323)
T cd05616 74 ---DRLYFVMEYVNGGDLMYQIQQVGRF---KEPHAVFYAAEIAIGLFFLHS-KGIIYRDLKLDNVMLDSEGHIKIADFG 146 (323)
T ss_pred ---CEEEEEEcCCCCCCHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCEEecCCCHHHeEECCCCcEEEccCC
Confidence 4899999999 5788888765432 233456669999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------- 247 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------- 247 (771)
++........ ......++..|+|||++.+ ..++.++|+|||||++|||++|..||......
T Consensus 147 ~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~ 214 (323)
T cd05616 147 MCKENMWDGV------TTKTFCGTPDYIAPEIIAY------QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM 214 (323)
T ss_pred CceecCCCCC------ccccCCCChhhcCHHHhcC------CCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9875432111 0112234458999999876 35778999999999999999999998643211
Q ss_pred -----ccCCCCcchHHHHHHHhccCCCCCCCh-----HHHhhCCCCCcc
Q 004157 248 -----NTASIPKSLLPDYQRLLSSMPSRRLNS-----SKLIENSEYFQN 286 (771)
Q Consensus 248 -----~~~~IP~~l~~~i~~lL~~~P~~Rps~-----~~lL~~~~fF~n 286 (771)
....++..+.+++.+||+.+|.+|++. .++++| .||+.
T Consensus 215 ~~~~~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h-~~~~~ 262 (323)
T cd05616 215 EHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH-AFFRY 262 (323)
T ss_pred hCCCCCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcC-CCcCC
Confidence 113467788999999999999999985 677777 67754
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.5e-32 Score=297.69 Aligned_cols=247 Identities=12% Similarity=0.155 Sum_probs=189.0
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
+|++.+.||.|+ | +||.|.++.+++.|+||++.+... .......+++|+.+++.++||||+++++.+++.
T Consensus 2 ~y~~~~~LG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~------ 73 (363)
T cd05628 2 DFESLKVIGRGAFG--EVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDK------ 73 (363)
T ss_pred CceEeEEEEeCCCE--EEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecC------
Confidence 589999999998 8 999999999999999999986422 123456788999999999999999999999863
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+||||||| ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~E~~~gg~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~~lH~-~givHrDlKp~NILi~~~~~vkL~DFGl 147 (363)
T cd05628 74 --LNLYLIMEFLPGGDMMTLLMKKDT---LTEEETQFYIAETVLAIDSIHQ-LGFIHRDIKPDNLLLDSKGHVKLSDFGL 147 (363)
T ss_pred --CeEEEEEcCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeEecCCCHHHeEECCCCCEEEeeccC
Confidence 4899999999 479988876543 2344566779999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCC-----------------------------CCccccccccCCCCCChhccccccccccCCCCCcchHHH
Q 004157 176 LSEFDGNNEAAN-----------------------------GPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWG 226 (771)
Q Consensus 176 a~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~S 226 (771)
++.......... ........+++..|+|||++.+ ..++.++|+||
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~------~~~~~~~DvwS 221 (363)
T cd05628 148 CTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQ------TGYNKLCDWWS 221 (363)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcC------CCCCCchhhhh
Confidence 876532110000 0000112244558999999876 35678999999
Q ss_pred HHHHHHHHhhCCCCCChhhh----hcc------------CCCCcchHHHHHHHhcc--CCCCCCChHHHhhCCCCCcch
Q 004157 227 LGCLIYELFSGMRLSKTEEL----RNT------------ASIPKSLLPDYQRLLSS--MPSRRLNSSKLIENSEYFQNK 287 (771)
Q Consensus 227 LG~li~el~~g~~p~~~~~l----~~~------------~~IP~~l~~~i~~lL~~--~P~~Rps~~~lL~~~~fF~n~ 287 (771)
|||++|||++|..||..... ..+ ..++..+.+++.+|+.. ++..||+++++++| +||++.
T Consensus 222 lGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h-p~f~~~ 299 (363)
T cd05628 222 LGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTN-PFFEGV 299 (363)
T ss_pred hHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC-CCCCCC
Confidence 99999999999999864321 111 12445677888887642 23356899999998 677654
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.2e-32 Score=304.01 Aligned_cols=245 Identities=12% Similarity=0.187 Sum_probs=189.7
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.|++.+.||.|+ | +||+|+++.+++.|+||++.+... .......+++|+++|+.++||||+++++.++.+
T Consensus 2 ~y~~~~~lG~G~~g--~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~------ 73 (376)
T cd05598 2 MFVKIKTIGIGAFG--EVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDK------ 73 (376)
T ss_pred CceEEEEEEeCCCe--EEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcC------
Confidence 599999999998 8 999999999999999999975321 123356688999999999999999999999863
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+||||||| ++|.+++...... ....+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~E~~~~g~L~~~i~~~~~~---~~~~~~~~~~qi~~al~~lH~-~~ivHrDlkp~Nill~~~~~ikL~DFG~ 147 (376)
T cd05598 74 --DNLYFVMDYIPGGDMMSLLIRLGIF---EEDLARFYIAELTCAIESVHK-MGFIHRDIKPDNILIDRDGHIKLTDFGL 147 (376)
T ss_pred --CEEEEEEeCCCCCcHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeEeCCCCHHHEEECCCCCEEEEeCCC
Confidence 4899999999 5799998775432 334456668999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCC-------------------------------------CCCccccccccCCCCCChhccccccccccCCC
Q 004157 176 LSEFDGNNEAA-------------------------------------NGPMLQYAWLVGAQYKPVELAKSDWTAVRKSP 218 (771)
Q Consensus 176 a~~~~~~~~~~-------------------------------------~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~ 218 (771)
+..+....... ..........++..|+|||++.+ ..+
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~ 221 (376)
T cd05598 148 CTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLR------TGY 221 (376)
T ss_pred CccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcC------CCC
Confidence 85432100000 00000011234458999999876 356
Q ss_pred CCcchHHHHHHHHHHHhhCCCCCChhhhh----------------ccCCCCcchHHHHHHHhccCCCCCC---ChHHHhh
Q 004157 219 PWSIDSWGLGCLIYELFSGMRLSKTEELR----------------NTASIPKSLLPDYQRLLSSMPSRRL---NSSKLIE 279 (771)
Q Consensus 219 ~~~~Di~SLG~li~el~~g~~p~~~~~l~----------------~~~~IP~~l~~~i~~lL~~~P~~Rp---s~~~lL~ 279 (771)
+.++|+|||||++|||++|..||...... ....++..+.+++.+|+ .+|.+|+ ++.++++
T Consensus 222 ~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~ 300 (376)
T cd05598 222 TQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKA 300 (376)
T ss_pred CcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhC
Confidence 78999999999999999999988543210 01245667888898876 5999999 8999999
Q ss_pred CCCCCcc
Q 004157 280 NSEYFQN 286 (771)
Q Consensus 280 ~~~fF~n 286 (771)
| +||..
T Consensus 301 h-~~~~~ 306 (376)
T cd05598 301 H-PFFKG 306 (376)
T ss_pred C-CCcCC
Confidence 8 56654
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.2e-32 Score=283.22 Aligned_cols=237 Identities=22% Similarity=0.332 Sum_probs=191.0
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~ 99 (771)
|++++.||+|+ | +||++.++.+++.|++|++..............+|++.+++++||||+++++++...
T Consensus 1 y~~~~~lg~G~~g--~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-------- 70 (260)
T PF00069_consen 1 YRLVKKLGSGGFG--TVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDD-------- 70 (260)
T ss_dssp EEEEEEEEEESSE--EEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEES--------
T ss_pred CEEeEEEEeCCCE--EEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccc--------
Confidence 88999999998 8 999999999999999999998765554444556699999999999999999999873
Q ss_pred cEEEEEecCC-c-chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 100 ITIYIVTEPV-M-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 100 ~~iyIVtE~v-~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
..+|+|||++ + +|.++|..... .....+...+.||+.||.+||+ .+++|+||||+||+++.+|.++|+|||.+.
T Consensus 71 ~~~~~v~~~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~L~~Lh~-~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~ 146 (260)
T PF00069_consen 71 NYLYIVMEYCPGGSLQDYLQKNKP---LSEEEILKIAYQILEALAYLHS-KGIVHRDIKPENILLDENGEVKLIDFGSSV 146 (260)
T ss_dssp SEEEEEEEEETTEBHHHHHHHHSS---BBHHHHHHHHHHHHHHHHHHHH-TTEEESSBSGGGEEESTTSEEEESSGTTTE
T ss_pred cccccccccccccccccccccccc---cccccccccccccccccccccc-cccccccccccccccccccccccccccccc
Confidence 4889999999 3 79999984432 2345567779999999999997 899999999999999999999999999987
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh---h-hh------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE---E-LR------ 247 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~---~-l~------ 247 (771)
....... ..........|+|||+...+ ...+.++|+||||+++|+|++|..|+... + ..
T Consensus 147 ~~~~~~~------~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~ 215 (260)
T PF00069_consen 147 KLSENNE------NFNPFVGTPEYMAPEVLQQG-----KKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKIL 215 (260)
T ss_dssp ESTSTTS------EBSSSSSSGGGSCHHHHTTT-----SSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHH
T ss_pred ccccccc------cccccccccccccccccccc-----ccccccccccccccccccccccccccccccchhhhhhhhhcc
Confidence 6421110 01122334589999998721 46678999999999999999999887643 1 10
Q ss_pred ------cc---CCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 248 ------NT---ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 248 ------~~---~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
.. ...+..+.+++.+||+.+|++||++.++++|+|
T Consensus 216 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~ 259 (260)
T PF00069_consen 216 KRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPW 259 (260)
T ss_dssp HTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGG
T ss_pred cccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCC
Confidence 00 122378999999999999999999999999844
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.9e-32 Score=301.29 Aligned_cols=245 Identities=13% Similarity=0.195 Sum_probs=189.9
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.|++.+.||.|+ | +||+|+++.+++.|+||++.+... .......+++|+++++.++||||+++++.+...
T Consensus 2 ~f~~~~~LG~G~~g--~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~------ 73 (382)
T cd05625 2 MFVKIKTLGIGAFG--EVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDK------ 73 (382)
T ss_pred CcEEEEEEEeCCCE--EEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeC------
Confidence 489999999998 8 999999999999999999975422 223456788999999999999999999999863
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
.++||||||| ++|.+++.+... .....+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~E~~~gg~L~~~l~~~~~---~~e~~~~~~~~qi~~al~~lH~-~~ivHrDlKp~NILl~~~g~~kL~DFGl 147 (382)
T cd05625 74 --DNLYFVMDYIPGGDMMSLLIRMGI---FPEDLARFYIAELTCAVESVHK-MGFIHRDIKPDNILIDRDGHIKLTDFGL 147 (382)
T ss_pred --CEEEEEEeCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEECCCCCEEEeECCC
Confidence 4899999999 479888876543 2344566679999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCC-----------------------------------------CCCccccccccCCCCCChhccccccccc
Q 004157 176 LSEFDGNNEAA-----------------------------------------NGPMLQYAWLVGAQYKPVELAKSDWTAV 214 (771)
Q Consensus 176 a~~~~~~~~~~-----------------------------------------~~~~~~~~~~~~~~Y~aPE~~~~~~~~~ 214 (771)
+..+....... ..........++..|+|||++.+
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~----- 222 (382)
T cd05625 148 CTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLR----- 222 (382)
T ss_pred CccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcC-----
Confidence 86432110000 00000011234458999999876
Q ss_pred cCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-------hc---------cCCCCcchHHHHHHHhccCCCCCCC---hH
Q 004157 215 RKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------RN---------TASIPKSLLPDYQRLLSSMPSRRLN---SS 275 (771)
Q Consensus 215 ~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-------~~---------~~~IP~~l~~~i~~lL~~~P~~Rps---~~ 275 (771)
..++.++|+|||||++|||++|.+||..... .. ...++....+++.+|+ .+|.+|++ +.
T Consensus 223 -~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ 300 (382)
T cd05625 223 -TGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGAD 300 (382)
T ss_pred -CCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHH
Confidence 3677899999999999999999999864221 00 1245677888898887 49999997 89
Q ss_pred HHhhCCCCCcc
Q 004157 276 KLIENSEYFQN 286 (771)
Q Consensus 276 ~lL~~~~fF~n 286 (771)
++++| +||..
T Consensus 301 ei~~h-p~f~~ 310 (382)
T cd05625 301 EIKAH-PFFKT 310 (382)
T ss_pred HHhcC-CCcCC
Confidence 99988 56654
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.8e-32 Score=293.22 Aligned_cols=234 Identities=17% Similarity=0.234 Sum_probs=184.0
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccCcCCcccEE
Q 004157 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDATSTKITI 102 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d~~~~~~~i 102 (771)
.||.|+ | +||+|+++.+++.|+||++.+... .+.....+.+|.++++.+ +||||++++++++.. ..+
T Consensus 2 ~lg~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~--------~~~ 71 (320)
T cd05590 2 VLGKGSFG--KVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTP--------DRL 71 (320)
T ss_pred eeeeCCCe--EEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcC--------CEE
Confidence 578887 8 999999999999999999975321 223455667788888876 699999999999863 489
Q ss_pred EEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccC
Q 004157 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (771)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~ 180 (771)
||||||| ++|..++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++....
T Consensus 72 ~iv~Ey~~~g~L~~~i~~~~~l---~~~~~~~~~~ql~~~L~~lH~-~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~ 147 (320)
T cd05590 72 FFVMEFVNGGDLMFHIQKSRRF---DEARARFYAAEITSALMFLHD-KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI 147 (320)
T ss_pred EEEEcCCCCchHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeEeCCCCHHHeEECCCCcEEEeeCCCCeecC
Confidence 9999999 5788888765432 334456679999999999996 899999999999999999999999999987543
Q ss_pred CCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc------------
Q 004157 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------------ 248 (771)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~------------ 248 (771)
.... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||.......
T Consensus 148 ~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~ 215 (320)
T cd05590 148 FNGK------TTSTFCGTPDYIAPEILQE------MLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVY 215 (320)
T ss_pred cCCC------cccccccCccccCHHHHcC------CCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCC
Confidence 2111 1112234558999999875 356778999999999999999999985432111
Q ss_pred cCCCCcchHHHHHHHhccCCCCCCCh------HHHhhCCCCCcc
Q 004157 249 TASIPKSLLPDYQRLLSSMPSRRLNS------SKLIENSEYFQN 286 (771)
Q Consensus 249 ~~~IP~~l~~~i~~lL~~~P~~Rps~------~~lL~~~~fF~n 286 (771)
...++..+.+++.+||+.+|.+|+++ .++++| +||.+
T Consensus 216 ~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h-~~f~~ 258 (320)
T cd05590 216 PTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRH-PFFKE 258 (320)
T ss_pred CCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcC-CCcCC
Confidence 12466778999999999999999998 788888 66654
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.1e-31 Score=293.76 Aligned_cols=239 Identities=20% Similarity=0.242 Sum_probs=200.0
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVR-HPNILAFLHSTEVENID 94 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d 94 (771)
...|++++.+|.|. | .||.++.+.+|+.+|+|++.+..... ...+.+++|+++|++|. ||||+++++.|++.
T Consensus 34 ~~~Y~l~~~lG~G~Fg--~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~--- 108 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFG--VVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDP--- 108 (382)
T ss_pred cccEEehhhhCCCCce--EEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcC---
Confidence 34699999999999 9 99999999999999999999865433 24578999999999999 99999999999984
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCC----CcE
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT----LDW 168 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~----G~~ 168 (771)
..+|||||+| +.|.+.|.... ..+......+.||+.+++|||+ .|++||||||+|+++... +.+
T Consensus 109 -----~~~~lvmEL~~GGeLfd~i~~~~----~sE~da~~~~~~il~av~~lH~-~gvvHrDlKpEN~L~~~~~~~~~~i 178 (382)
T KOG0032|consen 109 -----DSVYLVMELCEGGELFDRIVKKH----YSERDAAGIIRQILEAVKYLHS-LGVVHRDLKPENLLLASKDEGSGRI 178 (382)
T ss_pred -----CeEEEEEEecCCchHHHHHHHcc----CCHHHHHHHHHHHHHHHHHHHh-CCceeccCCHHHeeeccccCCCCcE
Confidence 4899999999 56888887762 3444456679999999999997 999999999999999643 579
Q ss_pred EEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh--
Q 004157 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-- 246 (771)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-- 246 (771)
|++|||++...... ......+++..|+|||++.. ..++..+||||+|+++|.|++|.+||..++-
T Consensus 179 k~~DFGla~~~~~~-------~~~~~~~Gtp~y~APEvl~~------~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~ 245 (382)
T KOG0032|consen 179 KLIDFGLAKFIKPG-------ERLHTIVGTPEYVAPEVLGG------RPYGDEVDVWSIGVILYILLSGVPPFWGETEFE 245 (382)
T ss_pred EEeeCCCceEccCC-------ceEeeecCCccccCchhhcC------CCCCcccchhHHHHHHHHHhhCCCCCcCCChhH
Confidence 99999999877651 11233455669999999986 4788899999999999999999999865441
Q ss_pred --------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 247 --------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 247 --------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
.....+...+.+++.+||..+|.+|+++.++|+|+|+.
T Consensus 246 ~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~ 297 (382)
T KOG0032|consen 246 IFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIK 297 (382)
T ss_pred HHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCcccc
Confidence 11246778899999999999999999999999996543
|
|
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.8e-32 Score=298.88 Aligned_cols=247 Identities=15% Similarity=0.172 Sum_probs=192.1
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
....|++.+.||.|+ | .||+++++.+++.|++|++.+... .......+.+|+.+++.++||||+++++.++.+
T Consensus 41 ~~~~y~~~~~lG~G~fg--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~--- 115 (370)
T cd05621 41 KAEDYDVVKVIGRGAFG--EVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDD--- 115 (370)
T ss_pred CHHHCeEEEEEEecCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcC---
Confidence 345799999999998 8 999999999999999999975321 223345678899999999999999999999863
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
..+|+||||| ++|.+++..... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|
T Consensus 116 -----~~~~lv~Ey~~gg~L~~~l~~~~~----~~~~~~~~~~qil~aL~~LH~-~~IvHrDLKp~NILl~~~~~~kL~D 185 (370)
T cd05621 116 -----KYLYMVMEYMPGGDLVNLMSNYDV----PEKWAKFYTAEVVLALDAIHS-MGLIHRDVKPDNMLLDKHGHLKLAD 185 (370)
T ss_pred -----CEEEEEEcCCCCCcHHHHHHhcCC----CHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHEEECCCCCEEEEe
Confidence 4899999999 579998876543 334566679999999999996 8999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----hc
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN 248 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~~ 248 (771)
||++........ .......++..|+|||++.+.- ....++.++|+|||||++|+|++|..||..... ..
T Consensus 186 FG~a~~~~~~~~-----~~~~~~~gt~~Y~aPE~~~~~~--~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~ 258 (370)
T cd05621 186 FGTCMKMDETGM-----VRCDTAVGTPDYISPEVLKSQG--GDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSK 258 (370)
T ss_pred cccceecccCCc-----eecccCCCCcccCCHHHHhccC--CCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 999987643211 1111234556899999986520 012356799999999999999999999864321 00
Q ss_pred ------c------CCCCcchHHHHHHHhccCCCC--CCChHHHhhCCCCCcc
Q 004157 249 ------T------ASIPKSLLPDYQRLLSSMPSR--RLNSSKLIENSEYFQN 286 (771)
Q Consensus 249 ------~------~~IP~~l~~~i~~lL~~~P~~--Rps~~~lL~~~~fF~n 286 (771)
. ..++..+.+++.+||..++.+ |+++.++++| +||++
T Consensus 259 i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h-p~~~~ 309 (370)
T cd05621 259 IMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH-PFFKN 309 (370)
T ss_pred HHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC-cccCC
Confidence 0 134566788899999865543 8999999998 56654
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-31 Score=291.87 Aligned_cols=235 Identities=17% Similarity=0.275 Sum_probs=184.0
Q ss_pred CCCCCCC-CceEEEEeEEC---CCCCcEEEEEEeCCCC--chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 25 DPYPSAW-GSWSHFQGTSK---DDGSPVSIFSISGTNA--QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k---~~g~~VaIK~~~~~~~--~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+.||.|+ | +||++++. .+++.|+||++..... .......+++|+.+|+.++||||+++++.++.+
T Consensus 2 ~~lg~G~~g--~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~------- 72 (323)
T cd05584 2 KVLGKGGYG--KVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTG------- 72 (323)
T ss_pred ceeeecCCe--EEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecC-------
Confidence 5688887 7 89998864 4688999999975321 123345678899999999999999999999864
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+|+||||+ ++|.+++...... ....+.+++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 73 -~~~~lv~e~~~~~~L~~~~~~~~~~---~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 147 (323)
T cd05584 73 -GKLYLILEYLSGGELFMHLEREGIF---MEDTACFYLSEISLALEHLHQ-QGIIYRDLKPENILLDAQGHVKLTDFGLC 147 (323)
T ss_pred -CeEEEEEeCCCCchHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeEECCCCCEEEeeCcCC
Confidence 3899999999 4798888765432 234456679999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh--------c
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--------N 248 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~--------~ 248 (771)
........ ......++..|+|||++.+ ..++.++|+|||||++|||++|..||...... .
T Consensus 148 ~~~~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~ 215 (323)
T cd05584 148 KESIHEGT------VTHTFCGTIEYMAPEILMR------SGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKG 215 (323)
T ss_pred eecccCCC------cccccCCCccccChhhccC------CCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcC
Confidence 75432211 0112234558999999875 35667899999999999999999988643211 1
Q ss_pred ----cCCCCcchHHHHHHHhccCCCCCC-----ChHHHhhCCCCCcc
Q 004157 249 ----TASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENSEYFQN 286 (771)
Q Consensus 249 ----~~~IP~~l~~~i~~lL~~~P~~Rp-----s~~~lL~~~~fF~n 286 (771)
...++..+.+++.+||..+|.+|+ ++.++++| +||..
T Consensus 216 ~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h-~~~~~ 261 (323)
T cd05584 216 KLNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH-PFFRH 261 (323)
T ss_pred CCCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC-CCcCC
Confidence 134566788999999999999999 89999988 56654
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.8e-32 Score=293.85 Aligned_cols=234 Identities=15% Similarity=0.202 Sum_probs=180.8
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHH-HHhcCCCCCeeEEeeeEEecccCcCCcccEE
Q 004157 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVK-RLRTVRHPNILAFLHSTEVENIDATSTKITI 102 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~-~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~i 102 (771)
.||.|+ | +||+|+++.+|+.|+||++.+.... ......+.+|.. .++.++||||+++++.++.. ..+
T Consensus 2 ~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~--------~~~ 71 (323)
T cd05575 2 VIGKGSFG--KVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTA--------DKL 71 (323)
T ss_pred eeeeCCCe--EEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeC--------CEE
Confidence 577887 7 9999999999999999999854221 122233344444 56889999999999999863 489
Q ss_pred EEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccC
Q 004157 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (771)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~ 180 (771)
|+||||+ ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++....
T Consensus 72 ~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~-~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~ 147 (323)
T cd05575 72 YFVLDYVNGGELFFHLQRERS---FPEPRARFYAAEIASALGYLHS-LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGI 147 (323)
T ss_pred EEEEcCCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeEeCCCCHHHeEECCCCcEEEeccCCCcccc
Confidence 9999999 578888876543 2344456679999999999996 899999999999999999999999999987543
Q ss_pred CCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh------------c
Q 004157 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------------N 248 (771)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------------~ 248 (771)
.... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||...+.. .
T Consensus 148 ~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~ 215 (323)
T cd05575 148 EHSK------TTSTFCGTPEYLAPEVLRK------QPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRL 215 (323)
T ss_pred cCCC------ccccccCChhhcChhhhcC------CCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 2111 0112234558999999876 35678999999999999999999988543211 1
Q ss_pred cCCCCcchHHHHHHHhccCCCCCCCh----HHHhhCCCCCcc
Q 004157 249 TASIPKSLLPDYQRLLSSMPSRRLNS----SKLIENSEYFQN 286 (771)
Q Consensus 249 ~~~IP~~l~~~i~~lL~~~P~~Rps~----~~lL~~~~fF~n 286 (771)
...++..+.+++++||..+|.+|+++ .++++| +||.+
T Consensus 216 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~-~~~~~ 256 (323)
T cd05575 216 KPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNH-VFFSS 256 (323)
T ss_pred CCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcC-CCcCC
Confidence 23577889999999999999999987 588887 56654
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.6e-31 Score=292.35 Aligned_cols=242 Identities=16% Similarity=0.181 Sum_probs=184.5
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEE-----CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEE
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTS-----KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTE 89 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~-----k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e 89 (771)
+..+|++++.||.|+ | +||+|.+ +.++..|+||++.... .......+.+|+++|+.+ +||||+++++++.
T Consensus 5 ~~~~~~~~~~lG~G~fg--~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 81 (338)
T cd05102 5 PRDRLRLGKVLGHGAFG--KVVEASAFGIDKKSSCNTVAVKMLKEGA-TASEHKALMSELKILIHIGNHLNVVNLLGACT 81 (338)
T ss_pred chhHceeeeEeccCCcc--eEEEEEEeccCCcccchhhheecccccc-chHHHHHHHHHHHHHHHhccCcceeeEEeEec
Confidence 456799999999999 8 9999975 3456789999987532 223456788999999999 8999999999886
Q ss_pred ecccCcCCcccEEEEEecCC--cchHHHHHHhCCC---------------------------------------------
Q 004157 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLE--------------------------------------------- 122 (771)
Q Consensus 90 ~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~--------------------------------------------- 122 (771)
.. ...+|+||||+ ++|.++|......
T Consensus 82 ~~-------~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (338)
T cd05102 82 KP-------NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTS 154 (338)
T ss_pred CC-------CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccC
Confidence 53 23689999999 6899988753210
Q ss_pred --------------CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCC
Q 004157 123 --------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANG 188 (771)
Q Consensus 123 --------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~ 188 (771)
.......+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|||+++........
T Consensus 155 ~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~--- 230 (338)
T cd05102 155 GSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLAS-RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY--- 230 (338)
T ss_pred cccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHH-CCEECCCCccceEEEcCCCcEEEeecccccccccCcch---
Confidence 011223345568899999999996 89999999999999999999999999999765432110
Q ss_pred CccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh--------------hccCCCC
Q 004157 189 PMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL--------------RNTASIP 253 (771)
Q Consensus 189 ~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l--------------~~~~~IP 253 (771)
........+..|+|||++.+ ..++.++|+|||||++|||++ |..||..... .....++
T Consensus 231 -~~~~~~~~~~~y~aPE~~~~------~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (338)
T cd05102 231 -VRKGSARLPLKWMAPESIFD------KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENAT 303 (338)
T ss_pred -hcccCCCCCccccCcHHhhc------CCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCC
Confidence 00111122347999999865 356789999999999999997 8877754211 1123456
Q ss_pred cchHHHHHHHhccCCCCCCChHHHhh
Q 004157 254 KSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 254 ~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
..+..++.+||+.+|..||++.++++
T Consensus 304 ~~l~~li~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 304 PEIYRIMLACWQGDPKERPTFSALVE 329 (338)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHH
Confidence 77899999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.2e-31 Score=284.88 Aligned_cols=242 Identities=18% Similarity=0.273 Sum_probs=191.7
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|++.+.||.|. | .||+|+++.+++.|+||.+......+.....+.+|+.++++++||||+++++++...+
T Consensus 6 ~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~------ 77 (293)
T cd07843 6 EYEKLNRIEEGTYG--VVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSN------ 77 (293)
T ss_pred hhhhhhhhcCCCCe--EEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecC------
Confidence 599999999998 7 9999999999999999999865444444556778999999999999999999987643
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
...+||||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||++.
T Consensus 78 ~~~~~lv~e~~~~~L~~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~-~~i~H~dl~p~nili~~~~~~~l~d~g~~~ 154 (293)
T cd07843 78 LDKIYMVMEYVEHDLKSLMETMKQ--PFLQSEVKCLMLQLLSGVAHLHD-NWILHRDLKTSNLLLNNRGILKICDFGLAR 154 (293)
T ss_pred CCcEEEEehhcCcCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHH-CCeeeccCCHHHEEECCCCcEEEeecCcee
Confidence 24899999999 578887766432 23345567779999999999996 899999999999999999999999999988
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-----------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----------- 246 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----------- 246 (771)
........ ......+..|+|||.+.+. ..++.++|+|||||++|+|++|.++|.....
T Consensus 155 ~~~~~~~~------~~~~~~~~~~~aPE~~~~~-----~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~ 223 (293)
T cd07843 155 EYGSPLKP------YTQLVVTLWYRAPELLLGA-----KEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLL 223 (293)
T ss_pred eccCCccc------cccccccccccCchhhcCC-----ccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Confidence 76542111 1112334579999988653 2346789999999999999999887742110
Q ss_pred -------------------------------hccCC--CCcchHHHHHHHhccCCCCCCChHHHhhCCCC
Q 004157 247 -------------------------------RNTAS--IPKSLLPDYQRLLSSMPSRRLNSSKLIENSEY 283 (771)
Q Consensus 247 -------------------------------~~~~~--IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~f 283 (771)
..... +++.+.+++++||+.+|++||++.+++.|.||
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 224 GTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred CCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 00011 46678899999999999999999999998543
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.6e-32 Score=292.44 Aligned_cols=235 Identities=17% Similarity=0.220 Sum_probs=184.8
Q ss_pred CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccCcCCcccE
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDATSTKIT 101 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d~~~~~~~ 101 (771)
+.||.|+ | +||+|+++.+++.|+||++.+... .+.....+.+|.++++.+ +||||++++++++.. ..
T Consensus 1 ~~lG~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~--------~~ 70 (321)
T cd05591 1 KVLGKGSFG--KVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTK--------DR 70 (321)
T ss_pred CccccCCCe--EEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcC--------Ce
Confidence 3578888 8 999999999999999999986422 223445677888888876 799999999999863 48
Q ss_pred EEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccccc
Q 004157 102 IYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (771)
Q Consensus 102 iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~ 179 (771)
+|+||||+ ++|...+...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++...
T Consensus 71 ~~lv~E~~~~~~L~~~l~~~~~~---~~~~~~~~~~qi~~aL~~LH~-~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~ 146 (321)
T cd05591 71 LFFVMEYVNGGDLMFQIQRSRKF---DEPRSRFYAAEVTLALMFLHR-HGVIYRDLKLDNILLDAEGHCKLADFGMCKEG 146 (321)
T ss_pred EEEEEeCCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHeEECCCCCEEEeecccceec
Confidence 99999999 5788888765432 233456679999999999996 89999999999999999999999999998754
Q ss_pred CCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh----c-------
Q 004157 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----N------- 248 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~----~------- 248 (771)
..... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||...... .
T Consensus 147 ~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 214 (321)
T cd05591 147 ILNGV------TTTTFCGTPDYIAPEILQE------LEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVL 214 (321)
T ss_pred ccCCc------cccccccCccccCHHHHcC------CCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC
Confidence 32211 1112234558999999875 35678999999999999999999998643211 1
Q ss_pred -cCCCCcchHHHHHHHhccCCCCCC-------ChHHHhhCCCCCcc
Q 004157 249 -TASIPKSLLPDYQRLLSSMPSRRL-------NSSKLIENSEYFQN 286 (771)
Q Consensus 249 -~~~IP~~l~~~i~~lL~~~P~~Rp-------s~~~lL~~~~fF~n 286 (771)
...++..+.+++.+||..+|.+|+ ++.++++| +||.+
T Consensus 215 ~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h-p~~~~ 259 (321)
T cd05591 215 YPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH-PFFKE 259 (321)
T ss_pred CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC-CccCC
Confidence 123567899999999999999999 88999988 66654
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.5e-31 Score=284.99 Aligned_cols=242 Identities=21% Similarity=0.309 Sum_probs=190.7
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc---hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ---DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~---~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
+|++.+.||.|+ | .||+|.++.+|+.|+||++...... ......+.+|+++++.++||||+++++++..+
T Consensus 1 ~y~~~~~lg~g~~~--~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~---- 74 (298)
T cd07841 1 RYEKGKKLGEGTYA--VVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHK---- 74 (298)
T ss_pred Cceeeeeeeecccc--EEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecC----
Confidence 589999999997 7 9999999999999999999865433 33445677899999999999999999999863
Q ss_pred CCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 96 ~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+|+||||+ ++|.+++..... ......+..++.||++||.|||+ .+++||||+|+||+++.+|.+||+|||
T Consensus 75 ----~~~~lv~e~~~~~L~~~i~~~~~--~~~~~~~~~~~~qi~~al~~lH~-~~i~H~dl~p~nill~~~~~~~l~dfg 147 (298)
T cd07841 75 ----SNINLVFEFMETDLEKVIKDKSI--VLTPADIKSYMLMTLRGLEYLHS-NWILHRDLKPNNLLIASDGVLKLADFG 147 (298)
T ss_pred ----CEEEEEEcccCCCHHHHHhccCC--CCCHHHHHHHHHHHHHHHHHHHh-CCeeecCCChhhEEEcCCCCEEEccce
Confidence 3899999999 578888876541 12344456679999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh--------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------- 246 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-------- 246 (771)
++......... .........|+|||.+.+. ..++.++|+|||||++|++++|.++|.....
T Consensus 148 ~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~ 216 (298)
T cd07841 148 LARSFGSPNRK------MTHQVVTRWYRAPELLFGA-----RHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIF 216 (298)
T ss_pred eeeeccCCCcc------ccccccceeeeCHHHHhCC-----CCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHH
Confidence 99876542111 0111234479999987542 3456789999999999999999776642110
Q ss_pred h--------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 247 R--------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 247 ~--------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
. ....++..+.+++.+||..+|++||++.++++| +||.+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~-~~~~~ 287 (298)
T cd07841 217 EALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH-PYFSN 287 (298)
T ss_pred HHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC-ccccC
Confidence 0 012345678889999999999999999999998 55554
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.5e-31 Score=291.40 Aligned_cols=240 Identities=18% Similarity=0.229 Sum_probs=188.1
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCC-CeeEEeeeEEecccCcC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHP-NILAFLHSTEVENIDAT 96 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHP-nIlkv~d~~e~e~~d~~ 96 (771)
.|++.+.||.|+ | .||+|+++.+++.|+||++.+... .+...+.+..|.++++.++|+ +|+++++++...
T Consensus 1 ~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~----- 73 (324)
T cd05587 1 DFNFLMVLGKGSFG--KVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM----- 73 (324)
T ss_pred CceEEEEEeeccCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcC-----
Confidence 489999999998 8 999999999999999999986422 223456677899999999875 588888888763
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+|+||||+ ++|..++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 74 ---~~~~lv~E~~~~g~L~~~~~~~~~~---~~~~~~~~~~qi~~al~~lH~-~~ivH~dlkp~Nill~~~~~~kL~Dfg 146 (324)
T cd05587 74 ---DRLYFVMEYVNGGDLMYHIQQVGKF---KEPHAVFYAAEIAIGLFFLHS-KGIIYRDLKLDNVMLDAEGHIKIADFG 146 (324)
T ss_pred ---CEEEEEEcCCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHeEEcCCCCEEEeecC
Confidence 4899999999 5798888765432 233455669999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------- 247 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------- 247 (771)
++........ ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 147 ~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~ 214 (324)
T cd05587 147 MCKENIFGGK------TTRTFCGTPDYIAPEIIAY------QPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIM 214 (324)
T ss_pred cceecCCCCC------ceeeecCCccccChhhhcC------CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9875322110 0112234568999999876 35678899999999999999999988543211
Q ss_pred -----ccCCCCcchHHHHHHHhccCCCCCCCh-----HHHhhCCCCCcc
Q 004157 248 -----NTASIPKSLLPDYQRLLSSMPSRRLNS-----SKLIENSEYFQN 286 (771)
Q Consensus 248 -----~~~~IP~~l~~~i~~lL~~~P~~Rps~-----~~lL~~~~fF~n 286 (771)
....++..+.+++.+||..+|.+|++. .++++| +||..
T Consensus 215 ~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h-p~~~~ 262 (324)
T cd05587 215 EHNVSYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREH-AFFRR 262 (324)
T ss_pred cCCCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC-CCcCC
Confidence 113466778899999999999999986 677777 67754
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.2e-31 Score=283.27 Aligned_cols=241 Identities=17% Similarity=0.239 Sum_probs=188.7
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|++.+.||.|. | .||+|+++.+|+.|+||++..+.........+.+|++.+++++||||++++++++..
T Consensus 1 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------- 71 (284)
T cd07860 1 NFQKVEKIGEGTYG--VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE------- 71 (284)
T ss_pred CceeeeeecCCCce--EEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccC-------
Confidence 488999999987 7 999999999999999999876544444456788999999999999999999998753
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
..+|+||||+ ++|..++...... ......+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||++.
T Consensus 72 -~~~~~v~e~~~~~l~~~~~~~~~~-~l~~~~~~~~~~~i~~~l~~lh~-~~i~H~~l~p~nill~~~~~~~l~dfg~~~ 148 (284)
T cd07860 72 -NKLYLVFEFLHQDLKKFMDASPLS-GIPLPLIKSYLFQLLQGLAFCHS-HRVLHRDLKPQNLLINTEGAIKLADFGLAR 148 (284)
T ss_pred -CcEEEEeeccccCHHHHHHhCCCC-CCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECCCCCEEEeeccchh
Confidence 4889999999 5788777654322 22344566679999999999996 899999999999999999999999999987
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh----------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---------- 247 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~---------- 247 (771)
........ .........|+|||+..+. ..++.++|+|||||++|+|++|..+|......
T Consensus 149 ~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~ 217 (284)
T cd07860 149 AFGVPVRT------YTHEVVTLWYRAPEILLGC-----KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 217 (284)
T ss_pred hcccCccc------cccccccccccCCeEEecC-----CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHh
Confidence 65432110 0111234579999987653 23567899999999999999999877432100
Q ss_pred -------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCC
Q 004157 248 -------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEY 283 (771)
Q Consensus 248 -------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~f 283 (771)
....++..+.+++.+||+.+|.+||++.++++|+||
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 218 GTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred CCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 012356677889999999999999999999999543
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.5e-32 Score=257.14 Aligned_cols=241 Identities=20% Similarity=0.332 Sum_probs=198.8
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|+--|+||+|+ | +||+|+++++++-|++|........+.....+.+|+-+|+.|+|.||++++|+...+
T Consensus 3 ~ydkmekigegtyg--tvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsd------- 73 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYG--TVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD------- 73 (292)
T ss_pred chHHHHhhcCCcce--eeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccC-------
Confidence 477778999999 9 999999999999999999998777777777889999999999999999999999874
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
+.+-+|+|+| ..|..++...+ +....+.+.-.+.|+++||.|+|+ .++.|||+||.|.+|+.+|+.||.|||+++
T Consensus 74 -kkltlvfe~cdqdlkkyfdsln--g~~d~~~~rsfmlqllrgl~fchs-hnvlhrdlkpqnllin~ngelkladfglar 149 (292)
T KOG0662|consen 74 -KKLTLVFEFCDQDLKKYFDSLN--GDLDPEIVRSFMLQLLRGLGFCHS-HNVLHRDLKPQNLLINRNGELKLADFGLAR 149 (292)
T ss_pred -ceeEEeHHHhhHHHHHHHHhcC--CcCCHHHHHHHHHHHHhhhhhhhh-hhhhhccCCcceEEeccCCcEEecccchhh
Confidence 3889999999 78888887653 333445566669999999999997 899999999999999999999999999998
Q ss_pred ccCCCCCCCCCCcccc-ccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhh----hhc---
Q 004157 178 EFDGNNEAANGPMLQY-AWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE----LRN--- 248 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~-~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~----l~~--- 248 (771)
.+.- |+..| ..+++..|+||.++.+. +-|+..+|+||-||++.|+-+ |.++|...+ ++.
T Consensus 150 afgi-------pvrcysaevvtlwyrppdvlfga-----kly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~ 217 (292)
T KOG0662|consen 150 AFGI-------PVRCYSAEVVTLWYRPPDVLFGA-----KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFR 217 (292)
T ss_pred hcCC-------ceEeeeceeeeeeccCcceeeee-----ehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHH
Confidence 7754 44444 34566799999999886 678889999999999999998 456665322 111
Q ss_pred ------------c----------------------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 249 ------------T----------------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 249 ------------~----------------------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
+ .++...-+++++++|..+|.+|++++..++| +||.+
T Consensus 218 ~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh-pyf~d 288 (292)
T KOG0662|consen 218 LLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH-PYFSD 288 (292)
T ss_pred HhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC-ccccc
Confidence 1 1112235677899999999999999999998 77754
|
|
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.3e-31 Score=279.03 Aligned_cols=242 Identities=17% Similarity=0.257 Sum_probs=189.4
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-------hHHHHHHHHHHHHhcCCCCCeeEEeeeEEec
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-------GHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-------~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e 91 (771)
+|.++..||.|. | .||.|.+..+++.|++|.+....... ...+.+++|+.++++++||||+++++++..+
T Consensus 1 ~~~~~~~ig~g~~~--~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 78 (267)
T cd06628 1 KWIKGALIGSGSFG--SVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDA 78 (267)
T ss_pred CccccceeecCCCe--EEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeC
Confidence 588899999986 6 99999999999999999997643221 2346788999999999999999999998864
Q ss_pred ccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEE
Q 004157 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWK 169 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~K 169 (771)
.+.|+||||+ ++|..++...... ....+..++.|++.||.|||+ .+++||||+|+||+++.++.+|
T Consensus 79 --------~~~~lv~e~~~~~~L~~~l~~~~~l---~~~~~~~~~~~l~~~l~~lH~-~~ivH~di~p~nil~~~~~~~~ 146 (267)
T cd06628 79 --------DHLNIFLEYVPGGSVAALLNNYGAF---EETLVRNFVRQILKGLNYLHN-RGIIHRDIKGANILVDNKGGIK 146 (267)
T ss_pred --------CccEEEEEecCCCCHHHHHHhccCc---cHHHHHHHHHHHHHHHHHHHh-cCcccccCCHHHEEEcCCCCEE
Confidence 3789999999 4788888765432 233455669999999999996 8999999999999999999999
Q ss_pred EEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----
Q 004157 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE---- 245 (771)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~---- 245 (771)
|+|||++....................+...|+|||.+.+ ..++.++|+|+|||++|+|++|..||....
T Consensus 147 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~------~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~ 220 (267)
T cd06628 147 ISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQ------TSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQA 220 (267)
T ss_pred ecccCCCcccccccccCCccccccccCCCcCccChhHhcc------CCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHH
Confidence 9999999876532111100000111223457999999865 345678999999999999999998875321
Q ss_pred hh---------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 246 LR---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 246 l~---------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
.. ....++..+.+++++||+.+|.+||++.++++|.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 265 (267)
T cd06628 221 IFKIGENASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHP 265 (267)
T ss_pred HHHHhccCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCC
Confidence 10 1134677789999999999999999999999984
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.5e-31 Score=274.95 Aligned_cols=240 Identities=21% Similarity=0.253 Sum_probs=191.8
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|++.+.+|.|+ | .||.++++.+++.|+||++..........+.+.+|++.+++++||||+++++.+...
T Consensus 1 ~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 71 (257)
T cd08223 1 AYCFVRVVGKGSYG--EVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGE------- 71 (257)
T ss_pred CceEEEEecCCCCe--EEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCC-------
Confidence 499999999998 8 999999999999999999986554445566789999999999999999999987643
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
...+|+|+||+ ++|.+++...... ......+..++.|++.||.|||+ .+++||||+|+||+++.++.++|+|||++
T Consensus 72 ~~~~~lv~e~~~~~~l~~~l~~~~~~-~l~~~~~~~~~~~l~~~l~~lH~-~~i~H~di~p~nil~~~~~~~~l~df~~~ 149 (257)
T cd08223 72 DGLLYIVMGFCEGGDLYHKLKEQKGK-LLPENQVVEWFVQIAMALQYLHE-KHILHRDLKTQNVFLTRTNIIKVGDLGIA 149 (257)
T ss_pred CCEEEEEecccCCCcHHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCchhEEEecCCcEEEecccce
Confidence 23689999999 4788888764321 12344566779999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc--------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN-------- 248 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~-------- 248 (771)
......... .........|+|||+..+ ..++.++|+|||||++|++++|..+|...+...
T Consensus 150 ~~~~~~~~~------~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~ 217 (257)
T cd08223 150 RVLENQCDM------ASTLIGTPYYMSPELFSN------KPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEG 217 (257)
T ss_pred EEecccCCc------cccccCCcCccChhHhcC------CCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhc
Confidence 766432110 111223458999999875 356678999999999999999998875432111
Q ss_pred -----cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 249 -----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 249 -----~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
...++..+.+++.+|++.+|..||++.++++|++
T Consensus 218 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~ 256 (257)
T cd08223 218 KLPPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPY 256 (257)
T ss_pred CCCCCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCC
Confidence 1235677899999999999999999999999843
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-31 Score=282.68 Aligned_cols=239 Identities=17% Similarity=0.261 Sum_probs=186.9
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
..|++.+.+|.|+ | +||+|+++.+++.|+||.+....... ....+.+|+++++.++||||++++++++.+
T Consensus 5 ~~y~~~~~lg~g~~~--~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------ 75 (291)
T cd07844 5 ETYKKLDKLGEGSYA--TVYKGRSKLTGQLVALKEIRLEHEEG-APFTAIREASLLKDLKHANIVTLHDIIHTK------ 75 (291)
T ss_pred cceeEEEEEeecCCe--EEEEEEEcCCCcEEEEEEEecccccC-CchhHHHHHHHHhhCCCcceeeEEEEEecC------
Confidence 5699999999998 8 99999999999999999997643222 223466899999999999999999998863
Q ss_pred cccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
.+.|+||||+ ++|.+++..... ......+..++.||++||.|||+ .+++||||+|+||+++.+|.+||+|||++
T Consensus 76 --~~~~lv~e~~~~~L~~~~~~~~~--~~~~~~~~~~~~ql~~al~~lH~-~~i~H~dl~p~nil~~~~~~~kl~dfg~~ 150 (291)
T cd07844 76 --KTLTLVFEYLDTDLKQYMDDCGG--GLSMHNVRLFLFQLLRGLAYCHQ-RRVLHRDLKPQNLLISERGELKLADFGLA 150 (291)
T ss_pred --CeEEEEEecCCCCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHh-CCeecccCCHHHEEEcCCCCEEECccccc
Confidence 4899999999 578888876432 22344567779999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-----hh----
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-----LR---- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-----l~---- 247 (771)
......... ......+..|+|||+..+. ..++.++|+|||||++|+|++|.++|.... +.
T Consensus 151 ~~~~~~~~~------~~~~~~~~~~~aPE~~~~~-----~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~ 219 (291)
T cd07844 151 RAKSVPSKT------YSNEVVTLWYRPPDVLLGS-----TEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFR 219 (291)
T ss_pred cccCCCCcc------ccccccccccCCcHHhhcC-----cccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHH
Confidence 754321110 0111234579999987653 245678999999999999999998874321 00
Q ss_pred ----------------------------------ccCCCC--cchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 248 ----------------------------------NTASIP--KSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 248 ----------------------------------~~~~IP--~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
....+. ..+.+++.+||+.+|.+||++.++++|++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~ 290 (291)
T cd07844 220 VLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPY 290 (291)
T ss_pred hcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCC
Confidence 001233 56678999999999999999999999854
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-31 Score=282.53 Aligned_cols=236 Identities=13% Similarity=0.173 Sum_probs=183.8
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEEE
Q 004157 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104 (771)
Q Consensus 27 ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iyI 104 (771)
||.|+ | +||.+.++.+|+.|+||++.+..... ...+.+.+|+++++.++||||++++++++.+ ..+|+
T Consensus 1 lg~G~~g--~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~--------~~~~l 70 (280)
T cd05608 1 LGKGGFG--EVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTK--------TDLCL 70 (280)
T ss_pred CCCCCce--eEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCC--------CeEEE
Confidence 46777 7 99999999999999999997543222 2345677899999999999999999998863 47999
Q ss_pred EecCC--cchHHHHHHhCC-CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCC
Q 004157 105 VTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (771)
Q Consensus 105 VtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~ 181 (771)
||||+ ++|..++..... ........+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++.....
T Consensus 71 v~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 149 (280)
T cd05608 71 VMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQ-RRIIYRDLKPENVLLDNDGNVRISDLGLAVELKD 149 (280)
T ss_pred EEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECCCCCEEEeeCccceecCC
Confidence 99999 578877754321 1223344456669999999999996 8999999999999999999999999999876543
Q ss_pred CCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-------h-h------
Q 004157 182 NNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-------L-R------ 247 (771)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-------l-~------ 247 (771)
.... .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||.... . .
T Consensus 150 ~~~~------~~~~~g~~~y~aPE~~~~------~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 217 (280)
T cd05608 150 GQSK------TKGYAGTPGFMAPELLQG------EEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDS 217 (280)
T ss_pred CCcc------ccccCCCcCccCHHHhcC------CCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccC
Confidence 2110 112234458999999876 356679999999999999999998875321 0 0
Q ss_pred --ccCCCCcchHHHHHHHhccCCCCCC-----ChHHHhhCCCCCcc
Q 004157 248 --NTASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENSEYFQN 286 (771)
Q Consensus 248 --~~~~IP~~l~~~i~~lL~~~P~~Rp-----s~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||+.+|.+|+ +++++++| +||+.
T Consensus 218 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h-~~~~~ 262 (280)
T cd05608 218 VTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH-PLFRD 262 (280)
T ss_pred CCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC-hhhhc
Confidence 0134677899999999999999999 77899988 56644
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-31 Score=291.92 Aligned_cols=234 Identities=17% Similarity=0.218 Sum_probs=183.5
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccCcCCcccEE
Q 004157 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDATSTKITI 102 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d~~~~~~~i 102 (771)
.||.|+ | +||.|+++.+++.|+||++.+.... ......+++|..+++++ +||||++++++++.+ ..+
T Consensus 2 ~lG~G~~g--~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~--------~~~ 71 (329)
T cd05588 2 VIGRGSYA--KVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTE--------SRL 71 (329)
T ss_pred eEeeCCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcC--------CEE
Confidence 577887 8 9999999999999999999864322 23456678899999998 699999999999864 489
Q ss_pred EEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccC
Q 004157 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (771)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~ 180 (771)
||||||| ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++....
T Consensus 72 ~lv~e~~~~g~L~~~~~~~~~---l~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~ 147 (329)
T cd05588 72 FFVIEFVSGGDLMFHMQRQRK---LPEEHARFYSAEISLALNFLHE-RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGI 147 (329)
T ss_pred EEEEeCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHeEECCCCCEEECcCccccccc
Confidence 9999999 478888866432 2344456679999999999996 899999999999999999999999999987532
Q ss_pred CCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh---------------
Q 004157 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE--------------- 245 (771)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~--------------- 245 (771)
.... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||....
T Consensus 148 ~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~ 215 (329)
T cd05588 148 RPGD------TTSTFCGTPNYIAPEILRG------EDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQ 215 (329)
T ss_pred cCCC------ccccccCCccccCHHHHcC------CCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHH
Confidence 2111 0112234558999999876 356789999999999999999999884210
Q ss_pred --hhc----cCCCCcchHHHHHHHhccCCCCCCC------hHHHhhCCCCCcc
Q 004157 246 --LRN----TASIPKSLLPDYQRLLSSMPSRRLN------SSKLIENSEYFQN 286 (771)
Q Consensus 246 --l~~----~~~IP~~l~~~i~~lL~~~P~~Rps------~~~lL~~~~fF~n 286 (771)
... ...++..+.+++.+||+.+|.+|++ +.++++| +||.+
T Consensus 216 ~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h-p~~~~ 267 (329)
T cd05588 216 VILEKQIRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH-PFFRN 267 (329)
T ss_pred HHHcCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC-CCCCC
Confidence 011 1235566788999999999999997 6899988 56654
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-32 Score=294.63 Aligned_cols=235 Identities=15% Similarity=0.243 Sum_probs=183.9
Q ss_pred CCCCCCC-CceEEEEeEE---CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCccc
Q 004157 25 DPYPSAW-GSWSHFQGTS---KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKI 100 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~---k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~ 100 (771)
+.||.|+ | +||.+.+ +.+|+.|+||++.+..........+.+|+++|++++||||+++++.++.+ .
T Consensus 2 ~~lg~G~~g--~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--------~ 71 (318)
T cd05582 2 KVLGQGSFG--KVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTE--------G 71 (318)
T ss_pred ceeeeCCCE--EEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcC--------C
Confidence 4678887 7 7887765 46789999999986433333445677899999999999999999999864 3
Q ss_pred EEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccc
Q 004157 101 TIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (771)
Q Consensus 101 ~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~ 178 (771)
.+|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++..
T Consensus 72 ~~~lv~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 147 (318)
T cd05582 72 KLYLILDFLRGGDLFTRLSKEVM---FTEEDVKFYLAELALALDHLHS-LGIIYRDLKPENILLDEEGHIKLTDFGLSKE 147 (318)
T ss_pred EEEEEEcCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCEecCCCCHHHeEECCCCcEEEeeccCCcc
Confidence 899999999 578888866432 2344566679999999999996 8999999999999999999999999999876
Q ss_pred cCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh--------c--
Q 004157 179 FDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--------N-- 248 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~--------~-- 248 (771)
...... ......+...|+|||++.+ ..++.++|+|||||++|+|++|..||...... .
T Consensus 148 ~~~~~~------~~~~~~g~~~y~aPE~~~~------~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~ 215 (318)
T cd05582 148 SIDHEK------KAYSFCGTVEYMAPEVVNR------RGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKL 215 (318)
T ss_pred cCCCCC------ceecccCChhhcCHHHHcC------CCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCC
Confidence 543211 1122234458999999875 35667999999999999999999888643211 1
Q ss_pred --cCCCCcchHHHHHHHhccCCCCCCC-----hHHHhhCCCCCcc
Q 004157 249 --TASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENSEYFQN 286 (771)
Q Consensus 249 --~~~IP~~l~~~i~~lL~~~P~~Rps-----~~~lL~~~~fF~n 286 (771)
...++..+.+++++||+.+|.+||+ +.++++| .||.+
T Consensus 216 ~~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~-~~~~~ 259 (318)
T cd05582 216 GMPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRH-PFFST 259 (318)
T ss_pred CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCC-CCcCC
Confidence 1235677899999999999999999 6678887 66665
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-31 Score=286.74 Aligned_cols=246 Identities=17% Similarity=0.257 Sum_probs=191.7
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
...+|++.+.||.|. | .||+|+++.+|+.|+||++..+...+.......+|+.++++++||||+++++++..+.
T Consensus 5 ~~~~y~~~~~ig~g~~~--~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--- 79 (309)
T cd07845 5 SVTEFEKLNRIGEGTYG--IVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKH--- 79 (309)
T ss_pred cccceeEeeeeeecCCE--EEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCC---
Confidence 345799999999997 7 9999999999999999999865443333345667999999999999999999987643
Q ss_pred CCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 96 ~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
...+|+||||+ ++|.+++.... .......+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||
T Consensus 80 ---~~~~~lv~e~~~~~l~~~l~~~~--~~l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~p~nil~~~~~~~kL~dfg 153 (309)
T cd07845 80 ---LDSIFLVMEYCEQDLASLLDNMP--TPFSESQVKCLMLQLLRGLQYLHE-NFIIHRDLKVSNLLLTDKGCLKIADFG 153 (309)
T ss_pred ---CCeEEEEEecCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEECCCCCEEECccc
Confidence 24789999999 57887776543 122344566679999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------- 247 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------- 247 (771)
++......... .........|+|||++.+. ..++.++|+|||||++|+|++|.++|......
T Consensus 154 ~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~ 222 (309)
T cd07845 154 LARTYGLPAKP------MTPKVVTLWYRAPELLLGC-----TTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLII 222 (309)
T ss_pred eeeecCCccCC------CCcccccccccChhhhcCC-----CCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 99876542110 0111224479999997653 34667899999999999999999887422100
Q ss_pred -----------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 -----------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 -----------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
....+++.+.+++++||..||++||++.+++.| +||.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h-~~f~ 294 (309)
T cd07845 223 QLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES-SYFK 294 (309)
T ss_pred HhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC-hhhc
Confidence 001245667889999999999999999999998 5554
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-31 Score=280.87 Aligned_cols=238 Identities=20% Similarity=0.273 Sum_probs=187.5
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.+|.|. | .||+|+++.+|+.|+||++..........+.+.+|++++++++||||+++++.++..
T Consensus 2 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~------- 72 (286)
T cd07847 2 KYEKLSKIGEGSYG--VVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRK------- 72 (286)
T ss_pred ceeeeeeecccCCe--EEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeC-------
Confidence 599999999998 8 999999999999999999976543333445678999999999999999999999863
Q ss_pred ccEEEEEecCC-cc-hHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV-MP-LSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v-~~-L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+|+||||+ +. |..++.... ......+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||++
T Consensus 73 -~~~~~v~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~ql~~~l~~LH~-~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 147 (286)
T cd07847 73 -RKLHLVFEYCDHTVLNELEKNPR---GVPEHLIKKIIWQTLQAVNFCHK-HNCIHRDVKPENILITKQGQIKLCDFGFA 147 (286)
T ss_pred -CEEEEEEeccCccHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHH-CCceecCCChhhEEEcCCCcEEECccccc
Confidence 4899999999 33 444443322 12344566779999999999996 99999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h-----
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R----- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~----- 247 (771)
......... .........|++||++.+. ..++.++|+|||||++|+|++|.+||..... .
T Consensus 148 ~~~~~~~~~------~~~~~~~~~~~aPE~~~~~-----~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~ 216 (286)
T cd07847 148 RILTGPGDD------YTDYVATRWYRAPELLVGD-----TQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKT 216 (286)
T ss_pred eecCCCccc------ccCcccccccCCHHHHhCC-----CCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence 876542210 1112234579999997653 3456789999999999999999988743210 0
Q ss_pred ----------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 248 ----------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 248 ----------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
....++..+.+++.+||..+|++||++.+++.|++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~ 285 (286)
T cd07847 217 LGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPY 285 (286)
T ss_pred hCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCC
Confidence 01245677889999999999999999999999843
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.4e-31 Score=275.61 Aligned_cols=244 Identities=16% Similarity=0.218 Sum_probs=193.9
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|++++.+|.|+ | +||+|....++..|+||++....... ....+.+|++.++.++||||+++++.++..
T Consensus 2 ~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 71 (267)
T cd06610 2 DYELIEVIGVGATA--VVYAAICLPNNEKVAIKRIDLEKCQT-SVDELRKEVQAMSQCNHPNVVKYYTSFVVG------- 71 (267)
T ss_pred cceeeeeecCCCCe--EEEEEEEcCCCcEEEEEEeccCCcch-HHHHHHHHHHHHHhcCCCCEEEEEEEEeeC-------
Confidence 599999999997 7 99999999999999999997654433 567789999999999999999999998763
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+|+|||++ ++|.+++.............+..++.||+.||.|||+ .+++||||+|+||++++++.+||+|||++
T Consensus 72 -~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~-~~i~h~~l~p~ni~~~~~~~~~l~df~~~ 149 (267)
T cd06610 72 -DELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHS-NGQIHRDIKAGNILLGEDGSVKIADFGVS 149 (267)
T ss_pred -CEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHhEEEcCCCCEEEcccchH
Confidence 4899999999 5798888765332223444566679999999999996 99999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh---------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--------- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~--------- 247 (771)
........... ...........|++||++... ..++.++|+|||||++|+|++|..|+......
T Consensus 150 ~~~~~~~~~~~--~~~~~~~~~~~y~~Pe~~~~~-----~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~ 222 (267)
T cd06610 150 ASLADGGDRTR--KVRKTFVGTPCWMAPEVMEQV-----HGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQN 222 (267)
T ss_pred HHhccCccccc--cccccccCChhhcChHHHccc-----cCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcC
Confidence 77654321110 011112334579999998653 25678899999999999999999887532210
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 248 ---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 248 ---------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
....++..+.+++.+||..+|.+||++.++++|++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~ 266 (267)
T cd06610 223 DPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKF 266 (267)
T ss_pred CCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCC
Confidence 01245677899999999999999999999999843
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-31 Score=291.22 Aligned_cols=234 Identities=15% Similarity=0.219 Sum_probs=182.3
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccCcCCcccEE
Q 004157 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDATSTKITI 102 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d~~~~~~~i 102 (771)
.||.|+ | +||+|+++.+++.|+||++.+.... ......+.+|+.++.++ +||||++++++++.. ..+
T Consensus 2 ~lG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~--------~~~ 71 (329)
T cd05618 2 VIGRGSYA--KVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE--------SRL 71 (329)
T ss_pred eeeeCCCe--EEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeC--------CEE
Confidence 578887 8 9999999999999999999865322 23456678899888876 799999999999874 489
Q ss_pred EEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccC
Q 004157 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (771)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~ 180 (771)
|+||||+ ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++....
T Consensus 72 ~lv~E~~~~~~L~~~~~~~~~---l~~~~~~~i~~qi~~~l~~lH~-~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~ 147 (329)
T cd05618 72 FFVIEYVNGGDLMFHMQRQRK---LPEEHARFYSAEISLALNYLHE-RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 147 (329)
T ss_pred EEEEeCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeeeCCCCHHHEEECCCCCEEEeeCCcccccc
Confidence 9999999 578887766432 2344466679999999999996 899999999999999999999999999987543
Q ss_pred CCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh------------h---
Q 004157 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE------------E--- 245 (771)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~------------~--- 245 (771)
..... .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||... .
T Consensus 148 ~~~~~------~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~ 215 (329)
T cd05618 148 RPGDT------TSTFCGTPNYIAPEILRG------EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ 215 (329)
T ss_pred CCCCc------cccccCCccccCHHHHcC------CCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHH
Confidence 21110 112234558999999876 35677999999999999999999887410 0
Q ss_pred --hhcc----CCCCcchHHHHHHHhccCCCCCCCh------HHHhhCCCCCcc
Q 004157 246 --LRNT----ASIPKSLLPDYQRLLSSMPSRRLNS------SKLIENSEYFQN 286 (771)
Q Consensus 246 --l~~~----~~IP~~l~~~i~~lL~~~P~~Rps~------~~lL~~~~fF~n 286 (771)
.... ..++..+.+++++||+.+|.+|+++ .++++| +||++
T Consensus 216 ~i~~~~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h-p~f~~ 267 (329)
T cd05618 216 VILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH-PFFRN 267 (329)
T ss_pred HHhcCCCCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC-CCCCC
Confidence 0111 2345567789999999999999984 788888 66655
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-31 Score=295.82 Aligned_cols=247 Identities=14% Similarity=0.164 Sum_probs=191.8
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
....|++.+.||.|+ | +||++.++.+++.|++|++.+... .......+.+|+.+++.++||||+++++.++..
T Consensus 41 ~~~~y~i~~~lG~G~fg--~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~--- 115 (371)
T cd05622 41 KAEDYEVVKVIGRGAFG--EVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD--- 115 (371)
T ss_pred chhhcEEEEEEeecCCe--EEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC---
Confidence 446799999999998 8 999999999999999999975322 223345678899999999999999999999863
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
.++|+||||| ++|.++++.... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|
T Consensus 116 -----~~~~lv~Ey~~gg~L~~~~~~~~~----~~~~~~~~~~qi~~aL~~LH~-~~ivHrDLkp~NIll~~~~~ikL~D 185 (371)
T cd05622 116 -----RYLYMVMEYMPGGDLVNLMSNYDV----PEKWARFYTAEVVLALDAIHS-MGFIHRDVKPDNMLLDKSGHLKLAD 185 (371)
T ss_pred -----CEEEEEEcCCCCCcHHHHHHhcCC----CHHHHHHHHHHHHHHHHHHHH-CCEEeCCCCHHHEEECCCCCEEEEe
Confidence 4899999999 579998876543 234456678999999999996 9999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----hc
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN 248 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~~ 248 (771)
||++........ .......++..|+|||++.+.-. ...++.++|+|||||++|||++|..||..... ..
T Consensus 186 fG~a~~~~~~~~-----~~~~~~~gt~~y~aPE~l~~~~~--~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~ 258 (371)
T cd05622 186 FGTCMKMNKEGM-----VRCDTAVGTPDYISPEVLKSQGG--DGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSK 258 (371)
T ss_pred CCceeEcCcCCc-----ccccCcccCccccCHHHHhccCC--CccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 999987643211 11112344568999999865210 02366799999999999999999999864321 00
Q ss_pred ------------cCCCCcchHHHHHHHhccCCCC--CCChHHHhhCCCCCcc
Q 004157 249 ------------TASIPKSLLPDYQRLLSSMPSR--RLNSSKLIENSEYFQN 286 (771)
Q Consensus 249 ------------~~~IP~~l~~~i~~lL~~~P~~--Rps~~~lL~~~~fF~n 286 (771)
...++..+.+++.+||...+.+ |+++.++++| .||.+
T Consensus 259 i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h-~~~~~ 309 (371)
T cd05622 259 IMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH-LFFKN 309 (371)
T ss_pred HHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC-cccCC
Confidence 1246677889999999844433 7899999998 45554
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-31 Score=289.66 Aligned_cols=235 Identities=16% Similarity=0.212 Sum_probs=185.9
Q ss_pred CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccCcCCcccE
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDATSTKIT 101 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d~~~~~~~ 101 (771)
+.||.|+ | +||+|.++.+++.|+||++.+... .......+.+|.++++.+ +||||++++++++.. ..
T Consensus 1 ~~lG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~--------~~ 70 (318)
T cd05570 1 KVLGKGSFG--KVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTK--------DR 70 (318)
T ss_pred CeeeeCCCe--EEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcC--------CE
Confidence 3578887 8 999999999999999999986421 223455677888999888 699999999999863 48
Q ss_pred EEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccccc
Q 004157 102 IYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (771)
Q Consensus 102 iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~ 179 (771)
+|+||||+ ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++...
T Consensus 71 ~~lv~e~~~~~~L~~~~~~~~~---l~~~~~~~~~~qi~~~l~~LH~-~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 146 (318)
T cd05570 71 LFFVMEYVNGGDLMFHIQRSGR---FDEPRARFYAAEIVLGLQFLHE-RGIIYRDLKLDNVLLDSEGHIKIADFGMCKEG 146 (318)
T ss_pred EEEEEcCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeEccCCCHHHeEECCCCcEEecccCCCeec
Confidence 99999999 578888876532 2344466679999999999996 89999999999999999999999999998753
Q ss_pred CCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh------------
Q 004157 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------------ 247 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------------ 247 (771)
..... ......+...|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 147 ~~~~~------~~~~~~g~~~y~aPE~~~~------~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~ 214 (318)
T cd05570 147 ILGGV------TTSTFCGTPDYIAPEILSY------QPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVR 214 (318)
T ss_pred CcCCC------cccceecCccccCHHHhcC------CCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCC
Confidence 22111 0112234558999999876 35678999999999999999999988543211
Q ss_pred ccCCCCcchHHHHHHHhccCCCCCCCh-----HHHhhCCCCCcc
Q 004157 248 NTASIPKSLLPDYQRLLSSMPSRRLNS-----SKLIENSEYFQN 286 (771)
Q Consensus 248 ~~~~IP~~l~~~i~~lL~~~P~~Rps~-----~~lL~~~~fF~n 286 (771)
....++..+.+++++||..+|.+||++ .++++| +||.+
T Consensus 215 ~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~-~~~~~ 257 (318)
T cd05570 215 YPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH-PFFRE 257 (318)
T ss_pred CCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC-CCcCC
Confidence 113467788999999999999999999 999988 66655
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.1e-32 Score=268.82 Aligned_cols=238 Identities=18% Similarity=0.249 Sum_probs=196.7
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
..|++|+.+|.|- | .||.|+.+.++--|++|++.++.-.. ....++++|+++-..|+||||++.|.+|.++
T Consensus 22 ~dfeigr~LgkgkFG--~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~----- 94 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFG--NVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDS----- 94 (281)
T ss_pred hhccccccccCCccc--cEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheecc-----
Confidence 4799999999988 9 99999999999999999998764322 3456789999999999999999999999874
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+|+++||. +.|...|........ .+..-+.+++|++.||.|+|. ++++||||||+|++++.+|..||+|||
T Consensus 95 ---~riyLilEya~~gel~k~L~~~~~~~f-~e~~~a~Yi~q~A~Al~y~h~-k~VIhRdiKpenlLlg~~~~lkiAdfG 169 (281)
T KOG0580|consen 95 ---KRIYLILEYAPRGELYKDLQEGRMKRF-DEQRAATYIKQLANALLYCHL-KRVIHRDIKPENLLLGSAGELKIADFG 169 (281)
T ss_pred ---ceeEEEEEecCCchHHHHHHhcccccc-cccchhHHHHHHHHHHHHhcc-CCcccCCCCHHHhccCCCCCeeccCCC
Confidence 4899999999 579999985432111 112233449999999999996 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------- 247 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------- 247 (771)
.+...... .+...+++..|.|||...+ ...+..+|+|++|+++||++.|.+||.+....
T Consensus 170 wsV~~p~~--------kR~tlcgt~dyl~pEmv~~------~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~ 235 (281)
T KOG0580|consen 170 WSVHAPSN--------KRKTLCGTLDYLPPEMVEG------RGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIR 235 (281)
T ss_pred ceeecCCC--------CceeeecccccCCHhhcCC------CCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHH
Confidence 97654321 1223345569999999987 47788999999999999999999999765422
Q ss_pred -----ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 248 -----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 248 -----~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
....|+....++|.+||..+|..|....+++.|+|
T Consensus 236 k~~~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpw 275 (281)
T KOG0580|consen 236 KVDLKFPSTISGGAADLISRLLVKNPIERLALTEVMDHPW 275 (281)
T ss_pred HccccCCcccChhHHHHHHHHhccCccccccHHHHhhhHH
Confidence 22568888999999999999999999999999954
|
|
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.8e-31 Score=283.48 Aligned_cols=238 Identities=15% Similarity=0.170 Sum_probs=190.3
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|++.+.||.|+ | .||++.++.+|..|++|.+.... .......+.+|++++++++||||+++++.+..+
T Consensus 2 ~~~~~~~lg~G~~g--~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------- 71 (308)
T cd06615 2 DFEKLGELGAGNGG--VVTKVLHRPSGLIMARKLIHLEI-KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSD------- 71 (308)
T ss_pred CceEEeeccCCCCe--EEEEEEEcCCCeEEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeC-------
Confidence 599999999998 8 99999999999999999987542 233456688899999999999999999999864
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+|+||||+ ++|.++++.... .....+..++.||+.||.|||+.++++||||+|+||+++.+|.+||+|||++
T Consensus 72 -~~~~lv~ey~~~~~L~~~l~~~~~---~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 147 (308)
T cd06615 72 -GEISICMEHMDGGSLDQVLKKAGR---IPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 147 (308)
T ss_pred -CEEEEEeeccCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCc
Confidence 4899999999 479999876532 2344566779999999999996569999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhcc-------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT------- 249 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~~------- 249 (771)
....... .........|+|||++.+ ..++.++|+|||||++|+|++|..|+...+....
T Consensus 148 ~~~~~~~--------~~~~~~~~~~~aPE~~~~------~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~ 213 (308)
T cd06615 148 GQLIDSM--------ANSFVGTRSYMSPERLQG------THYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRP 213 (308)
T ss_pred ccccccc--------cccCCCCcCccChhHhcC------CCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCc
Confidence 6553311 111234458999999765 3466789999999999999999987642111000
Q ss_pred -------------------------------------------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 250 -------------------------------------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 250 -------------------------------------------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
..++..+.+++.+||..+|++||++.++++| +||.+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~-~~~~~ 292 (308)
T cd06615 214 VSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH-PFIKR 292 (308)
T ss_pred cccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC-hhhhh
Confidence 0134568899999999999999999999998 55543
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-31 Score=296.01 Aligned_cols=246 Identities=13% Similarity=0.173 Sum_probs=190.6
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.|++.+.||.|+ | +||.+.++.+++.|+||++..... .......+++|+++++.++||||+++++.++..
T Consensus 2 ~f~~~~~lG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~------ 73 (360)
T cd05627 2 DFESLKVIGRGAFG--EVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDK------ 73 (360)
T ss_pred CceEEEEEeeCCCE--EEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcC------
Confidence 589999999998 8 999999999999999999975321 223456788999999999999999999999863
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
.++||||||| ++|.+++.+.... ....++.++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~E~~~gg~L~~~l~~~~~l---~~~~~~~~~~qi~~~L~~lH~-~givHrDLkp~NIli~~~~~vkL~DfG~ 147 (360)
T cd05627 74 --RNLYLIMEFLPGGDMMTLLMKKDTL---SEEATQFYIAETVLAIDAIHQ-LGFIHRDIKPDNLLLDAKGHVKLSDFGL 147 (360)
T ss_pred --CEEEEEEeCCCCccHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeEccCCCHHHEEECCCCCEEEeeccC
Confidence 4899999999 5799988765432 234456669999999999996 9999999999999999999999999999
Q ss_pred ccccCCCCCCCC-----------------------------CCccccccccCCCCCChhccccccccccCCCCCcchHHH
Q 004157 176 LSEFDGNNEAAN-----------------------------GPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWG 226 (771)
Q Consensus 176 a~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~S 226 (771)
+........... .....+...++..|+|||++.+ ..++.++|+||
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~------~~~~~~~DiwS 221 (360)
T cd05627 148 CTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQ------TGYNKLCDWWS 221 (360)
T ss_pred CcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcC------CCCCCcceecc
Confidence 875532110000 0000112244558999999876 46778999999
Q ss_pred HHHHHHHHhhCCCCCChhhhh----------cc------CCCCcchHHHHHHHhccCCCCCCC---hHHHhhCCCCCcch
Q 004157 227 LGCLIYELFSGMRLSKTEELR----------NT------ASIPKSLLPDYQRLLSSMPSRRLN---SSKLIENSEYFQNK 287 (771)
Q Consensus 227 LG~li~el~~g~~p~~~~~l~----------~~------~~IP~~l~~~i~~lL~~~P~~Rps---~~~lL~~~~fF~n~ 287 (771)
|||++|||++|.+||...... .. ..++..+.+++.+|+. +|..|++ +.++++| +||.+.
T Consensus 222 lGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~h-p~f~~~ 299 (360)
T cd05627 222 LGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSH-PFFEGV 299 (360)
T ss_pred ccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcC-CCCCCC
Confidence 999999999999998543211 00 1245667888888874 9999984 7899988 677764
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-31 Score=306.73 Aligned_cols=252 Identities=14% Similarity=0.189 Sum_probs=192.9
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEee-eEEecccC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLH-STEVENID 94 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d-~~e~e~~d 94 (771)
..+++|.+.|.+|+ + .||.|.....|..||+|.+-.. ++..+..+++||.+||.|+ |||||.|+| .......+
T Consensus 36 ~~~v~V~~vLAEGGFa--~VYla~~~~~~~~~AlKrm~~~--de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~ 111 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFA--QVYLAQDVKGGKKYALKRMYVN--DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSN 111 (738)
T ss_pred CEEEEEEEEEccCCcE--EEEEEEecCCCceeeeeeeecC--CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCC
Confidence 34677777888886 6 9999999988899999998764 5567889999999999999 999999999 43333222
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCC--ceecCCCCCCEEEcCCCcEEE
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCK--LVHGNVCLSSVVVTQTLDWKL 170 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~--ivH~dIkp~NI~v~~~G~~KL 170 (771)
++ .-.++|.|||| +.|-+++..+.-.. ..+..|..|++++++|+.+||. ++ |||||||-+|||++.+|.|||
T Consensus 112 ~~--~~EvllLmEyC~gg~Lvd~mn~Rlq~~-lte~eVLkIf~dv~~AVa~mH~-~~pPiIHRDLKiENvLls~~g~~KL 187 (738)
T KOG1989|consen 112 NG--VWEVLLLMEYCKGGSLVDFMNTRLQTR-LTEDEVLKIFYDVCEAVAAMHY-LKPPIIHRDLKIENVLLSADGNYKL 187 (738)
T ss_pred Cc--eeEEEeehhhccCCcHHHHHHHHHhcc-CChHHHHHHHHHHHHHHHHHhc-CCCccchhhhhhhheEEcCCCCEEe
Confidence 11 35789999999 47999998654332 3344577889999999999996 77 999999999999999999999
Q ss_pred EccCcccccCCCCCCCCC-Ccccc--ccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh-hh
Q 004157 171 HAFDVLSEFDGNNEAANG-PMLQY--AWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-EL 246 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~-~~~~~--~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~-~l 246 (771)
||||-++...-......+ .+... ....+..|++||++.-- . ....+.++|||+||||+|.|+....||+.. .+
T Consensus 188 CDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDly-s--g~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l 264 (738)
T KOG1989|consen 188 CDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLY-S--GLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL 264 (738)
T ss_pred CcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhh-c--CCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce
Confidence 999998754332111110 01111 11234599999998531 1 145678999999999999999999999765 43
Q ss_pred hcc---C------CCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 RNT---A------SIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 ~~~---~------~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.-+ + +++..+.++|+.||..||.+||++.+++.+
T Consensus 265 aIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~ 307 (738)
T KOG1989|consen 265 AILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEE 307 (738)
T ss_pred eEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence 322 3 344569999999999999999999998764
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.2e-32 Score=300.28 Aligned_cols=247 Identities=17% Similarity=0.231 Sum_probs=198.2
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENID 94 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d 94 (771)
--.|.+.+.+|.|. | +|+.+..+.+++.+|||++.+..- .+...+..+.|-+++.... ||.+++++.+|.+
T Consensus 367 l~~F~~l~vLGkGsFG--kV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT---- 440 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFG--KVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQT---- 440 (694)
T ss_pred ccceEEEEEeccCcCc--eEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeeccccccc----
Confidence 34688899999999 9 999999999999999999997542 2345677888888888875 9999999999997
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
++++|+||||+ +++..+.+...+. +.-...+...|+.||.|||+ +||||||||.+||+++..|.+||+|
T Consensus 441 ----~~~l~fvmey~~Ggdm~~~~~~~~F~----e~rarfyaAev~l~L~fLH~-~~IIYRDlKLdNiLLD~eGh~kiAD 511 (694)
T KOG0694|consen 441 ----KEHLFFVMEYVAGGDLMHHIHTDVFS----EPRARFYAAEVVLGLQFLHE-NGIIYRDLKLDNLLLDTEGHVKIAD 511 (694)
T ss_pred ----CCeEEEEEEecCCCcEEEEEeccccc----HHHHHHHHHHHHHHHHHHHh-cCceeeecchhheEEcccCcEEecc
Confidence 45999999999 4543333333332 22245669999999999996 9999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc----
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN---- 248 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~---- 248 (771)
||+|+.-...+ ..+..+++++.|+|||++.+ ..|+.++|.|+||+|||||+.|..||..++-..
T Consensus 512 FGlcKe~m~~g------~~TsTfCGTpey~aPEil~e------~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~Fds 579 (694)
T KOG0694|consen 512 FGLCKEGMGQG------DRTSTFCGTPEFLAPEVLTE------QSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDS 579 (694)
T ss_pred cccccccCCCC------CccccccCChhhcChhhhcc------CcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH
Confidence 99998754321 23556777889999999988 589999999999999999999999997544322
Q ss_pred --------cCCCCcchHHHHHHHhccCCCCCCCh----HHHhhCCCCCcchhhhh
Q 004157 249 --------TASIPKSLLPDYQRLLSSMPSRRLNS----SKLIENSEYFQNKLVDT 291 (771)
Q Consensus 249 --------~~~IP~~l~~~i~~lL~~~P~~Rps~----~~lL~~~~fF~n~lv~~ 291 (771)
..-++.+...++++||..+|++|+-. ++-+...+||++.-.+.
T Consensus 580 I~~d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~ 634 (694)
T KOG0694|consen 580 IVNDEVRYPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDWDD 634 (694)
T ss_pred HhcCCCCCCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCHHH
Confidence 13466778899999999999999976 34444448998765443
|
|
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.8e-31 Score=281.86 Aligned_cols=241 Identities=16% Similarity=0.207 Sum_probs=190.8
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.|++.+.||.|+ | +||++.+..+++.||||++....... .....+.+|+++++.++||||+++++.++..
T Consensus 1 ~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------ 72 (285)
T cd05605 1 TFRHYRVLGKGGFG--EVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETK------ 72 (285)
T ss_pred CceEEEEEecCCCe--EEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCC------
Confidence 488999999998 8 99999999999999999997543222 2345567899999999999999999999763
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+|+||||+ ++|..++..... .......+..++.||+.||.|||+ .+++||||+|+||+++++|.++|+|||+
T Consensus 73 --~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nil~~~~~~~~l~Dfg~ 148 (285)
T cd05605 73 --DALCLVLTLMNGGDLKFHIYNMGN-PGFDEERAVFYAAEITCGLEDLHR-ERIVYRDLKPENILLDDYGHIRISDLGL 148 (285)
T ss_pred --CeEEEEEeccCCCcHHHHHHhcCc-CCCCHHHHHHHHHHHHHHHHHHHH-CCcEecCCCHHHEEECCCCCEEEeeCCC
Confidence 4899999999 468877765322 112344566779999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-------h-
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------R- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-------~- 247 (771)
+........ .....+...|+|||++.+ ..++.++|+|||||++|++++|..||..... .
T Consensus 149 ~~~~~~~~~-------~~~~~~~~~y~aPE~~~~------~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~ 215 (285)
T cd05605 149 AVEIPEGET-------IRGRVGTVGYMAPEVVKN------ERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVER 215 (285)
T ss_pred ceecCCCCc-------cccccCCCCccCcHHhcC------CCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHH
Confidence 876543211 011234458999999875 3566789999999999999999998854211 0
Q ss_pred --------ccCCCCcchHHHHHHHhccCCCCCC-----ChHHHhhCCCCCcc
Q 004157 248 --------NTASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENSEYFQN 286 (771)
Q Consensus 248 --------~~~~IP~~l~~~i~~lL~~~P~~Rp-----s~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||..||.+|| ++.++++| .||..
T Consensus 216 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~-~~~~~ 266 (285)
T cd05605 216 RVKEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH-PFFRT 266 (285)
T ss_pred HhhhcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC-cCccC
Confidence 0124677789999999999999999 88899988 56654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.8e-31 Score=281.13 Aligned_cols=244 Identities=17% Similarity=0.175 Sum_probs=191.9
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|++.+.||.|+ | +||++.++.+|..|++|.+.... .+.....+.+|++.+++++||||+++++.+..+
T Consensus 2 ~~~~~~~ig~g~~g--~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------- 71 (286)
T cd06622 2 EIEVLDELGKGNYG--SVYKVLHRPTGVTMAMKEIRLEL-DESKFNQIIMELDILHKAVSPYIVDFYGAFFIE------- 71 (286)
T ss_pred hhhhhhhhcccCCe--EEEEEEEcCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecC-------
Confidence 589999999998 8 99999999999999999987542 333456788999999999999999999998864
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+|+||||+ ++|..++.............+.+++.||+.||.|||+.++++||||+|+||+++.+|.+||+|||++
T Consensus 72 -~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 150 (286)
T cd06622 72 -GAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVS 150 (286)
T ss_pred -CeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCc
Confidence 4899999999 4688888764222223455677889999999999996579999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-------h--
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------R-- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-------~-- 247 (771)
........ ........|++||++.+.-......++.++|+|||||++|++++|..||..... .
T Consensus 151 ~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 222 (286)
T cd06622 151 GNLVASLA--------KTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAI 222 (286)
T ss_pred ccccCCcc--------ccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHH
Confidence 76543211 111233479999998653221223456789999999999999999988743211 1
Q ss_pred -------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 248 -------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 248 -------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
....++..+..++.+||..+|.+||++.++++|+|
T Consensus 223 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~ 264 (286)
T cd06622 223 VDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPW 264 (286)
T ss_pred hhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChh
Confidence 01235567889999999999999999999999843
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.9e-32 Score=276.15 Aligned_cols=248 Identities=20% Similarity=0.283 Sum_probs=197.7
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCC----cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGS----PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~----~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
+.|++...||.|+ | .||+|..+.++. .+|||.|..+......-..+.+|+..+|.|+||||+.+..+|...
T Consensus 24 ~~ye~ig~Ig~GTYG--~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~-- 99 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYG--KVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSH-- 99 (438)
T ss_pred HHhhccceecccccc--eeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhcc--
Confidence 5799999999999 9 999998776653 789999987665556667888999999999999999999999763
Q ss_pred CcCCcccEEEEEecCC-cchHHHHHHhCCC--CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCC----C
Q 004157 94 DATSTKITIYIVTEPV-MPLSEKIKELGLE--GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT----L 166 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v-~~L~~~L~~~~~~--~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~----G 166 (771)
...+|+++||. .+|...|+-.... .......++-+++||+.|+.|||+ +-++||||||.||+|..+ |
T Consensus 100 -----d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~-NWvlHRDLKPaNIlvmgdgperG 173 (438)
T KOG0666|consen 100 -----DKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHS-NWVLHRDLKPANILVMGDGPERG 173 (438)
T ss_pred -----CceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhh-hheeeccCCcceEEEeccCCccC
Confidence 24899999999 4899988764421 223345577889999999999997 889999999999999987 9
Q ss_pred cEEEEccCcccccCCCCCCCCCCcccc-ccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh
Q 004157 167 DWKLHAFDVLSEFDGNNEAANGPMLQY-AWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE 245 (771)
Q Consensus 167 ~~KL~dFgla~~~~~~~~~~~~~~~~~-~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~ 245 (771)
.+||+|||+++.+.+.- .|+... .-+++..|+|||++.+. +.|+.++|+|++||++.||++-.|+|.+.+
T Consensus 174 ~VKIaDlGlaR~~~~pl----kpl~s~d~VVVTiWYRAPELLLGa-----~hYT~AiDvWAiGCIfaElLtl~PlF~g~E 244 (438)
T KOG0666|consen 174 RVKIADLGLARLFNNPL----KPLASLDPVVVTIWYRAPELLLGA-----RHYTKAIDVWAIGCIFAELLTLEPLFKGRE 244 (438)
T ss_pred eeEeecccHHHHhhccc----cccccCCceEEEEEecChHHhccc-----ccccchhhhHHHHHHHHHHHccCccccchh
Confidence 99999999999886521 122222 22345589999999986 789999999999999999999887764321
Q ss_pred -------------hhcc---------------CC------------------------------CCcchHHHHHHHhccC
Q 004157 246 -------------LRNT---------------AS------------------------------IPKSLLPDYQRLLSSM 267 (771)
Q Consensus 246 -------------l~~~---------------~~------------------------------IP~~l~~~i~~lL~~~ 267 (771)
+..+ .+ -++...+++.+||+.|
T Consensus 245 ~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yD 324 (438)
T KOG0666|consen 245 EKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYD 324 (438)
T ss_pred hhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccC
Confidence 1100 01 1334667788999999
Q ss_pred CCCCCChHHHhhCCCCCcc
Q 004157 268 PSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 268 P~~Rps~~~lL~~~~fF~n 286 (771)
|.+|+++++.|+| .||..
T Consensus 325 P~kRIta~qAleh-~yF~~ 342 (438)
T KOG0666|consen 325 PIKRITAEQALEH-PYFTE 342 (438)
T ss_pred chhhccHHHHhcc-ccccc
Confidence 9999999999998 77754
|
|
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.7e-31 Score=283.76 Aligned_cols=239 Identities=18% Similarity=0.252 Sum_probs=178.3
Q ss_pred cCCCCCCC-CceEEEEeEECC--CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCccc
Q 004157 24 GDPYPSAW-GSWSHFQGTSKD--DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKI 100 (771)
Q Consensus 24 ~e~ig~G~-g~wtVy~g~~k~--~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~ 100 (771)
+.+||.|+ | +||+|+++. ++..|++|.+..... ...+.+|+++|++++||||+++++++.... ..
T Consensus 6 g~~lG~G~~g--~Vy~~~~~~~~~~~~~a~k~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~~ 73 (317)
T cd07867 6 GCKVGRGTYG--HVYKAKRKDGKDEKEYALKQIEGTGI----SMSACREIALLRELKHPNVIALQKVFLSHS------DR 73 (317)
T ss_pred ceEeccCCCe--eEEEEEecCCCccceEEEEEecCCCC----cHHHHHHHHHHHhCCCCCeeeEEEEEeccC------CC
Confidence 45789998 8 999999764 567899999875422 234678999999999999999999987543 34
Q ss_pred EEEEEecCC-cchHHHHHHhCC------CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEE----cCCCcEE
Q 004157 101 TIYIVTEPV-MPLSEKIKELGL------EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV----TQTLDWK 169 (771)
Q Consensus 101 ~iyIVtE~v-~~L~~~L~~~~~------~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v----~~~G~~K 169 (771)
.+|+||||+ ++|.+++..... ........+..++.||+.||.|||+ .+++||||||+||++ +.+|.+|
T Consensus 74 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~-~~ivH~Dlkp~Nil~~~~~~~~~~~k 152 (317)
T cd07867 74 KVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHA-NWVLHRDLKPANILVMGEGPERGRVK 152 (317)
T ss_pred eEEEEEeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHh-CCEEcCCCCHHHEEEccCCCCCCcEE
Confidence 899999999 568777754321 1112344567779999999999996 899999999999999 5678999
Q ss_pred EEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh---
Q 004157 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--- 246 (771)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l--- 246 (771)
|+|||+++......... .......++..|+|||++.+. ..++.++|+|||||++|||++|.++|...+.
T Consensus 153 l~DfG~a~~~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~ 224 (317)
T cd07867 153 IADMGFARLFNSPLKPL---ADLDPVVVTFWYRAPELLLGA-----RHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIK 224 (317)
T ss_pred EeeccceeccCCCcccc---cccCcceecccccCcHHhcCC-----CccCcHHHHHhHHHHHHHHHhCCCCccccccccc
Confidence 99999998664421100 001112334589999998653 3467789999999999999999988742110
Q ss_pred -------------------------hc---c----------------------------CCCCcchHHHHHHHhccCCCC
Q 004157 247 -------------------------RN---T----------------------------ASIPKSLLPDYQRLLSSMPSR 270 (771)
Q Consensus 247 -------------------------~~---~----------------------------~~IP~~l~~~i~~lL~~~P~~ 270 (771)
.. . ......+.+++.+||..||.+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~ 304 (317)
T cd07867 225 TSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTK 304 (317)
T ss_pred ccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCccc
Confidence 00 0 011234667899999999999
Q ss_pred CCChHHHhhCCCC
Q 004157 271 RLNSSKLIENSEY 283 (771)
Q Consensus 271 Rps~~~lL~~~~f 283 (771)
|||+.++|+|++|
T Consensus 305 R~t~~e~l~hp~f 317 (317)
T cd07867 305 RITSEQALQDPYF 317 (317)
T ss_pred ccCHHHHhcCCCC
Confidence 9999999999543
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-31 Score=287.40 Aligned_cols=235 Identities=17% Similarity=0.232 Sum_probs=180.8
Q ss_pred CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhc-CCCCCeeEEeeeEEecccCcCCcccE
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRT-VRHPNILAFLHSTEVENIDATSTKIT 101 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~-LrHPnIlkv~d~~e~e~~d~~~~~~~ 101 (771)
+.||.|+ | +||+|+++.+++.|+||++.+... .+...+....|...+.. ++||||++++++++.. ..
T Consensus 1 ~~lG~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~--------~~ 70 (316)
T cd05592 1 KVLGKGSFG--KVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTK--------EH 70 (316)
T ss_pred CeeeeCCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcC--------CE
Confidence 3578888 8 999999999999999999986422 12234445566777765 4799999999999863 48
Q ss_pred EEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccccc
Q 004157 102 IYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (771)
Q Consensus 102 iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~ 179 (771)
+||||||+ ++|..+++.... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++...
T Consensus 71 ~~lv~e~~~gg~L~~~~~~~~~---~~~~~~~~~~~qi~~al~~LH~-~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~ 146 (316)
T cd05592 71 LFFVMEYLNGGDLMFHIQSSGR---FDEARARFYAAEIICGLQFLHK-KGIIYRDLKLDNVLLDKDGHIKIADFGMCKEN 146 (316)
T ss_pred EEEEEcCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCEEeCCCCHHHeEECCCCCEEEccCcCCeEC
Confidence 99999999 578888876543 2334456669999999999996 89999999999999999999999999998764
Q ss_pred CCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh--------c---
Q 004157 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--------N--- 248 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~--------~--- 248 (771)
..... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||...... .
T Consensus 147 ~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~ 214 (316)
T cd05592 147 MNGEG------KASTFCGTPDYIAPEILKG------QKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPH 214 (316)
T ss_pred CCCCC------ccccccCCccccCHHHHcC------CCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC
Confidence 33211 0112234568999999876 35678899999999999999999988643211 1
Q ss_pred -cCCCCcchHHHHHHHhccCCCCCCChH-HHhhCCCCCcc
Q 004157 249 -TASIPKSLLPDYQRLLSSMPSRRLNSS-KLIENSEYFQN 286 (771)
Q Consensus 249 -~~~IP~~l~~~i~~lL~~~P~~Rps~~-~lL~~~~fF~n 286 (771)
...++..+.+++.+||..+|.+|++.. ++++| +||..
T Consensus 215 ~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h-~~~~~ 253 (316)
T cd05592 215 FPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQH-PFFRG 253 (316)
T ss_pred CCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcC-cccCC
Confidence 123567788999999999999999975 56666 66654
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.1e-31 Score=287.07 Aligned_cols=236 Identities=16% Similarity=0.213 Sum_probs=182.5
Q ss_pred CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccCcCCcccE
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDATSTKIT 101 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d~~~~~~~ 101 (771)
+.||.|+ | +||+|+++.+|+.|+||++.+... .+.....+.+|.+.++.+ +||||+++++.++.. .+
T Consensus 1 ~~lg~G~~g--~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~--------~~ 70 (316)
T cd05620 1 KVLGKGSFG--KVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTK--------EH 70 (316)
T ss_pred CeeeeCCCe--EEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeC--------CE
Confidence 3578887 8 999999999999999999986421 112345567788888764 899999999999863 48
Q ss_pred EEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccccc
Q 004157 102 IYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (771)
Q Consensus 102 iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~ 179 (771)
+|+||||+ ++|..++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++...
T Consensus 71 ~~lv~E~~~~g~L~~~i~~~~~~---~~~~~~~~~~qi~~~l~~lH~-~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~ 146 (316)
T cd05620 71 LFFVMEFLNGGDLMFHIQDKGRF---DLYRATFYAAEIVCGLQFLHS-KGIIYRDLKLDNVMLDRDGHIKIADFGMCKEN 146 (316)
T ss_pred EEEEECCCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHeEECCCCCEEeCccCCCeec
Confidence 99999999 5788888765332 233455668999999999996 89999999999999999999999999998753
Q ss_pred CCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc-----------
Q 004157 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN----------- 248 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~----------- 248 (771)
..... ......++..|+|||++.+ ..++.++|+|||||++|||++|..||.......
T Consensus 147 ~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~ 214 (316)
T cd05620 147 VFGDN------RASTFCGTPDYIAPEILQG------LKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPH 214 (316)
T ss_pred ccCCC------ceeccCCCcCccCHHHHcC------CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC
Confidence 22110 0112334568999999876 356788999999999999999999885432211
Q ss_pred -cCCCCcchHHHHHHHhccCCCCCCChH-HHhhCCCCCcch
Q 004157 249 -TASIPKSLLPDYQRLLSSMPSRRLNSS-KLIENSEYFQNK 287 (771)
Q Consensus 249 -~~~IP~~l~~~i~~lL~~~P~~Rps~~-~lL~~~~fF~n~ 287 (771)
...++..+.+++++||..+|.+|+++. ++++| +||.+.
T Consensus 215 ~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h-~~f~~~ 254 (316)
T cd05620 215 YPRWITKESKDILEKLFERDPTRRLGVVGNIRGH-PFFKTI 254 (316)
T ss_pred CCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcC-CCcCCC
Confidence 123556788999999999999999985 66666 778664
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.2e-31 Score=273.88 Aligned_cols=239 Identities=20% Similarity=0.249 Sum_probs=191.2
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.+|.|. | ++|.++++.+|+.|+||.+............+.+|++++++++||||+++++.++..
T Consensus 1 ~y~~~~~lg~g~~g--~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 71 (256)
T cd08218 1 KYVKVKKIGEGSFG--KAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEEN------- 71 (256)
T ss_pred CceEEEEeccCCce--EEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCC-------
Confidence 589999999998 8 999999999999999999986544444556789999999999999999999999763
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
.+.|+||||+ ++|.+++....... .....+..++.|++.||.|||+ ++++|+||+|+||+++.++.++|+|||++
T Consensus 72 -~~~~lv~e~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~lh~-~~i~h~~l~~~nil~~~~~~~~l~d~~~~ 148 (256)
T cd08218 72 -GNLYIVMDYCEGGDLYKKINAQRGVL-FPEDQILDWFVQICLALKHVHD-RKILHRDIKSQNIFLTKDGTIKLGDFGIA 148 (256)
T ss_pred -CeEEEEEecCCCCcHHHHHHhccCCC-CCHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEEcCCCCEEEeeccce
Confidence 4899999999 47988887643211 1233455568999999999996 99999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh---------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--------- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~--------- 247 (771)
......... .........|+|||+..+ ...+.++|+|||||++|++++|..++......
T Consensus 149 ~~~~~~~~~------~~~~~~~~~~~~pe~~~~------~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~ 216 (256)
T cd08218 149 RVLNSTVEL------ARTCIGTPYYLSPEICEN------RPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRG 216 (256)
T ss_pred eecCcchhh------hhhccCCccccCHHHhCC------CCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcC
Confidence 766442110 111223457999999876 34567899999999999999999887543211
Q ss_pred ----ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 248 ----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 248 ----~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
....++..+.+++.+||+.+|.+||++.++++|++
T Consensus 217 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~ 255 (256)
T cd08218 217 SYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNF 255 (256)
T ss_pred CCCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcC
Confidence 11345667899999999999999999999999844
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.7e-31 Score=278.04 Aligned_cols=241 Identities=16% Similarity=0.265 Sum_probs=189.5
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.++|+.|. | +||+|+++.+|+.|+||++...... .....+.+|+++++.++||||+++++.+...
T Consensus 1 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------- 70 (284)
T cd07836 1 NFKQLEKLGEGTYA--TVYKGRNRTTGEIVALKEIHLDAEE-GTPSTAIREISLMKELKHENIVRLHDVIHTE------- 70 (284)
T ss_pred CceEeeeeccCCce--EEEEEEECCCCeEEEEEEecccccc-cchHHHHHHHHHHHhhcCCCEeeeeeeEeeC-------
Confidence 589999999997 7 9999999999999999999865332 2345677899999999999999999999874
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
...||||||+ ++|.+++.............+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||++.
T Consensus 71 -~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~ 148 (284)
T cd07836 71 -NKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHE-NRVLHRDLKPQNLLINKRGELKLADFGLAR 148 (284)
T ss_pred -CcEEEEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHH-CCeeeCCCCHHHEEECCCCcEEEeecchhh
Confidence 3789999999 6788888765422223445566779999999999996 899999999999999999999999999987
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh----------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---------- 247 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~---------- 247 (771)
........ .........|++||++.+. ..++.++|+|+|||++|++++|.++|......
T Consensus 149 ~~~~~~~~------~~~~~~~~~y~~PE~~~~~-----~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~ 217 (284)
T cd07836 149 AFGIPVNT------FSNEVVTLWYRAPDVLLGS-----RTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIM 217 (284)
T ss_pred hhcCCccc------cccccccccccChHHhcCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHh
Confidence 65432110 0111223479999987653 34567899999999999999999887532100
Q ss_pred ------------c-------------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCC
Q 004157 248 ------------N-------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEY 283 (771)
Q Consensus 248 ------------~-------------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~f 283 (771)
. ...++..+.+++.+||+.+|.+||++.++++|++|
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 218 GTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred CCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 0 02346678899999999999999999999998443
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-31 Score=303.49 Aligned_cols=237 Identities=16% Similarity=0.210 Sum_probs=181.1
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCC------CeeEEeeeEEec
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHP------NILAFLHSTEVE 91 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHP------nIlkv~d~~e~e 91 (771)
.+|++.+.||.|+ | +||+|+++.+++.||||++.... .....++.|+++++.++|. +|+++++++..+
T Consensus 129 ~~y~i~~~lG~G~fg--~V~~a~~~~~~~~vAvK~i~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~ 203 (467)
T PTZ00284 129 QRFKILSLLGEGTFG--KVVEAWDRKRKEYCAVKIVRNVP---KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNE 203 (467)
T ss_pred CcEEEEEEEEeccCE--EEEEEEEcCCCeEEEEEEEecch---hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcC
Confidence 5699999999998 8 99999999999999999996421 2233456677777777654 588999988754
Q ss_pred ccCcCCcccEEEEEecCCc-chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC----
Q 004157 92 NIDATSTKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL---- 166 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G---- 166 (771)
..++|||||+++ .|.+++.+... .....+..++.||+.||.|||.+++||||||||+||+++.+|
T Consensus 204 -------~~~~~iv~~~~g~~l~~~l~~~~~---l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~ 273 (467)
T PTZ00284 204 -------TGHMCIVMPKYGPCLLDWIMKHGP---FSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVD 273 (467)
T ss_pred -------CceEEEEEeccCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccc
Confidence 248999999994 68888876532 233446677999999999999646999999999999998776
Q ss_pred ------------cEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHH
Q 004157 167 ------------DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYEL 234 (771)
Q Consensus 167 ------------~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el 234 (771)
.+||+|||.+...... .....++..|+|||++.+ ..++.++|||||||++|||
T Consensus 274 ~~~~~~~~~~~~~vkl~DfG~~~~~~~~---------~~~~~gt~~Y~APE~~~~------~~~~~~~DiwSlGvil~el 338 (467)
T PTZ00284 274 PVTNRALPPDPCRVRICDLGGCCDERHS---------RTAIVSTRHYRSPEVVLG------LGWMYSTDMWSMGCIIYEL 338 (467)
T ss_pred cccccccCCCCceEEECCCCccccCccc---------cccccCCccccCcHHhhc------CCCCcHHHHHHHHHHHHHH
Confidence 4999999987543221 112344568999999876 3677899999999999999
Q ss_pred hhCCCCCChhhh--------hccCCC----------------------------------------------CcchHHHH
Q 004157 235 FSGMRLSKTEEL--------RNTASI----------------------------------------------PKSLLPDY 260 (771)
Q Consensus 235 ~~g~~p~~~~~l--------~~~~~I----------------------------------------------P~~l~~~i 260 (771)
++|.+||..... ..+..+ ...+.+++
T Consensus 339 ltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli 418 (467)
T PTZ00284 339 YTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLI 418 (467)
T ss_pred HhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHH
Confidence 999999853210 000111 12245789
Q ss_pred HHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 261 QRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 261 ~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
.+||..||.+|+++.++|+| +||..
T Consensus 419 ~~mL~~dP~~R~ta~e~L~H-p~~~~ 443 (467)
T PTZ00284 419 YGLLHYDRQKRLNARQMTTH-PYVLK 443 (467)
T ss_pred HHhCCcChhhCCCHHHHhcC-ccccc
Confidence 99999999999999999999 56654
|
|
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=280.63 Aligned_cols=252 Identities=16% Similarity=0.257 Sum_probs=189.7
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.+|.|+ | .||+|+++.+++.|+||++......+.....+.+|++.+++++||||+++++++......+...
T Consensus 13 ~y~~~~~lg~g~~~--~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 13 KYEKLAKIGQGTFG--EVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred heEEEEEeecCCCE--EEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 699999999997 7 9999999999999999998765434334445678999999999999999999987543211112
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
...+|+||||+ +.|...+..... ......+..++.||+.||.|||+ .+++|+||+|+||+++.+|.+||+|||++.
T Consensus 91 ~~~~~lv~e~~~~~l~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~-~~i~H~dl~p~nil~~~~~~~kl~dfg~~~ 167 (310)
T cd07865 91 KGSFYLVFEFCEHDLAGLLSNKNV--KFTLSEIKKVMKMLLNGLYYIHR-NKILHRDMKAANILITKDGILKLADFGLAR 167 (310)
T ss_pred CceEEEEEcCCCcCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHEEECCCCcEEECcCCCcc
Confidence 34789999999 567777765431 12345567779999999999996 899999999999999999999999999998
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-------c-c
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------N-T 249 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~-------~-~ 249 (771)
........... ..........|+|||++.+. ..++.++|+|||||++|+|++|.+++...+.. . .
T Consensus 168 ~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~ 240 (310)
T cd07865 168 AFSLSKNSKPN--RYTNRVVTLWYRPPELLLGE-----RDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLC 240 (310)
T ss_pred cccCCcccCCC--CccCcccCccccCcHHhcCC-----cccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 76542211100 01112334579999987653 23567899999999999999998877432210 0 0
Q ss_pred C------------------------------------CCCcchHHHHHHHhccCCCCCCChHHHhhCCCC
Q 004157 250 A------------------------------------SIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEY 283 (771)
Q Consensus 250 ~------------------------------------~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~f 283 (771)
. .....+.+++.+||..+|.+||+++++++|+||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 241 GSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred CCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 0 012345678999999999999999999999543
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=274.86 Aligned_cols=239 Identities=14% Similarity=0.182 Sum_probs=189.4
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
...+|++.+.+|.|. | .||+|+++.+++.|+||++..+... ....+++|+..+++++||||+++++.+..+
T Consensus 7 ~~~~y~~~~~lg~g~~g--~vy~~~~~~~~~~~aik~~~~~~~~--~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~---- 78 (267)
T cd06646 7 PQHDYELIQRVGSGTYG--DVYKARNLHTGELAAVKIIKLEPGD--DFSLIQQEIFMVKECKHCNIVAYFGSYLSR---- 78 (267)
T ss_pred chhhcchhheeecCCCe--EEEEEEECCCCeEEEEEEEecCccc--hHHHHHHHHHHHHhcCCCCeeeeeEEEEeC----
Confidence 456799999999998 8 9999999999999999999754322 345688999999999999999999999863
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+|+||||+ ++|.+++..... .....+.+++.|++.||.|||+ .+++||||+|+||+++.+|.+||+||
T Consensus 79 ----~~~~iv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~p~nill~~~~~~~l~df 150 (267)
T cd06646 79 ----EKLWICMEYCGGGSLQDIYHVTGP---LSELQIAYVCRETLQGLAYLHS-KGKMHRDIKGANILLTDNGDVKLADF 150 (267)
T ss_pred ----CEEEEEEeCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCccccCCCHHHEEECCCCCEEECcC
Confidence 4889999999 479888875432 2344567779999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-h------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-L------ 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-l------ 246 (771)
|++......... .........|+|||.+.... ...++.++|+|||||++|||++|..|+.... .
T Consensus 151 g~~~~~~~~~~~------~~~~~~~~~y~~PE~~~~~~---~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~ 221 (267)
T cd06646 151 GVAAKITATIAK------RKSFIGTPYWMAPEVAAVEK---NGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLM 221 (267)
T ss_pred ccceeecccccc------cCccccCccccCHhHccccc---CCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheee
Confidence 999866432110 11123345799999875321 1235678999999999999999987763211 0
Q ss_pred ----------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 ----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 ----------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....++..+.+++++||..+|.+||+++++++|
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 265 (267)
T cd06646 222 SKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTH 265 (267)
T ss_pred ecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence 0112356778999999999999999999999987
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=281.78 Aligned_cols=247 Identities=19% Similarity=0.242 Sum_probs=190.0
Q ss_pred CceecCCCCCCC-CceEEEEeEECC--CCCcEEEEEEeCCC-CchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKD--DGSPVSIFSISGTN-AQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~--~g~~VaIK~~~~~~-~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
+|++.+.||.|+ | .||+|+++. ++..|+||.+.... ..+...+.+.+|+.++++++||||+++++.+....
T Consensus 1 ~y~~~~~ig~g~~g--~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--- 75 (316)
T cd07842 1 KYEIEGCIGRGTYG--RVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHA--- 75 (316)
T ss_pred CceEEEEeccCCcE--EEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCC---
Confidence 489999999998 8 999999998 89999999998643 12233456788999999999999999999998653
Q ss_pred CCcccEEEEEecCC-cchHHHHHHhCCC--CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC----CCcE
Q 004157 96 TSTKITIYIVTEPV-MPLSEKIKELGLE--GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ----TLDW 168 (771)
Q Consensus 96 ~~~~~~iyIVtE~v-~~L~~~L~~~~~~--~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~----~G~~ 168 (771)
...+|+||||+ ++|...+...... .......+..++.||+.||.|||+ .+++||||+|+||+++. +|.+
T Consensus 76 ---~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~i~h~dlkp~Nil~~~~~~~~~~~ 151 (316)
T cd07842 76 ---DKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHS-NWVLHRDLKPANILVMGEGPERGVV 151 (316)
T ss_pred ---CceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHh-CCEeeCCCCHHHEEEcCCCCccceE
Confidence 24899999999 4677776543321 123455677789999999999996 89999999999999999 9999
Q ss_pred EEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc
Q 004157 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN 248 (771)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~ 248 (771)
||+|||++......... .........+..|+|||++.+. ..++.++|+|||||++|+|++|.++|.......
T Consensus 152 kl~Dfg~~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~ 223 (316)
T cd07842 152 KIGDLGLARLFNAPLKP---LADLDPVVVTIWYRAPELLLGA-----RHYTKAIDIWAIGCIFAELLTLEPIFKGREAKI 223 (316)
T ss_pred EECCCccccccCCCccc---ccccCCccccccccCHHHHhCC-----CCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccc
Confidence 99999998866442110 0111122344579999987653 345678999999999999999998875221100
Q ss_pred -------------------------------------------c---C------------CCCcchHHHHHHHhccCCCC
Q 004157 249 -------------------------------------------T---A------------SIPKSLLPDYQRLLSSMPSR 270 (771)
Q Consensus 249 -------------------------------------------~---~------------~IP~~l~~~i~~lL~~~P~~ 270 (771)
. . ..+..+.+++.+||..+|++
T Consensus 224 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~ 303 (316)
T cd07842 224 KKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTK 303 (316)
T ss_pred cccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCccc
Confidence 0 0 23445778899999999999
Q ss_pred CCChHHHhhCCCC
Q 004157 271 RLNSSKLIENSEY 283 (771)
Q Consensus 271 Rps~~~lL~~~~f 283 (771)
||++.++++|++|
T Consensus 304 Rps~~eil~~~~f 316 (316)
T cd07842 304 RITAEEALEHPYF 316 (316)
T ss_pred CcCHHHHhcCCCC
Confidence 9999999999543
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=275.58 Aligned_cols=242 Identities=16% Similarity=0.243 Sum_probs=190.4
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc--------hhHHHHHHHHHHHHhcCCCCCeeEEeeeEE
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ--------DGHLAAARNGVKRLRTVRHPNILAFLHSTE 89 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~--------~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e 89 (771)
|+|.+.+.+|.|+ | +||+|.++.+|+.|+||.+...... ....+.+++|+..++.++||||++++++++
T Consensus 1 ~~~~~~~~lg~g~~~--~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 78 (272)
T cd06629 1 FKWVKGELIGKGTYG--RVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFET 78 (272)
T ss_pred CceeecceecccCce--EEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEec
Confidence 6899999999998 7 9999999999999999998643211 123456788999999999999999999987
Q ss_pred ecccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCc
Q 004157 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD 167 (771)
Q Consensus 90 ~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~ 167 (771)
.. ..+|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||+|+||+++.+|.
T Consensus 79 ~~--------~~~~lv~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~~~nil~~~~~~ 146 (272)
T cd06629 79 TE--------EYLSIFLEYVPGGSIGSCLRTYGR---FEEQLVRFFTEQVLEGLAYLHS-KGILHRDLKADNLLVDADGI 146 (272)
T ss_pred cC--------CceEEEEecCCCCcHHHHHhhccC---CCHHHHHHHHHHHHHHHHHHhh-CCeeecCCChhhEEEcCCCe
Confidence 53 4899999999 579998877532 2344566679999999999996 89999999999999999999
Q ss_pred EEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-
Q 004157 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL- 246 (771)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l- 246 (771)
+||+|||++........ ............|++||+..... ..++.++|+||||+++|++++|..|+...+.
T Consensus 147 ~~l~d~~~~~~~~~~~~----~~~~~~~~~~~~y~~PE~~~~~~----~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~ 218 (272)
T cd06629 147 CKISDFGISKKSDDIYD----NDQNMSMQGSVFWMAPEVIHSYS----QGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAI 218 (272)
T ss_pred EEEeecccccccccccc----ccccccccCCccccCHHHhcccc----CCCCccchhHHHHHHHHHHHhCCCCCcCcchH
Confidence 99999999876543110 00011122345799999976531 2366789999999999999999988753221
Q ss_pred ---h--------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 247 ---R--------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 247 ---~--------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
. ....++..+.+++.+||..+|..||++.++++|++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~ 271 (272)
T cd06629 219 AAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPF 271 (272)
T ss_pred HHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCC
Confidence 0 01245778999999999999999999999999953
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=276.59 Aligned_cols=246 Identities=16% Similarity=0.167 Sum_probs=188.3
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHH-HHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVK-RLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~-~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
+|++.+.||.|+ | .||+|+++.+|+.|+||++......+.... +..|+. .++.+.||||++++++++.+
T Consensus 2 ~~~~~~~ig~g~~g--~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~-~~~e~~~~~~~~~~~~iv~~~~~~~~~------ 72 (283)
T cd06617 2 DLEVIEELGRGAYG--VVDKMRHVPTGTIMAVKRIRATVNSQEQKR-LLMDLDISMRSVDCPYTVTFYGALFRE------ 72 (283)
T ss_pred CceEEEEecccCCe--EEEEEEEcCCCcEEEEEEEecCCCcHHHHH-HHHHHHHHHHHcCCCCeeeeeEEEecC------
Confidence 589999999998 8 999999999999999999987544333333 334555 46778899999999999863
Q ss_pred cccEEEEEecCC-cchHHHHHHhC-CCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELG-LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~-~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+|+||||+ ++|.+++.... .........+..++.||+.||.|||+.++++||||+|+||+++.++.+||+|||+
T Consensus 73 --~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~ 150 (283)
T cd06617 73 --GDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGI 150 (283)
T ss_pred --CcEEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeccc
Confidence 3789999999 67888776532 2222345556677999999999999745999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh-----hhhc--
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-----ELRN-- 248 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~-----~l~~-- 248 (771)
+....... ..........|+|||++.+... ...++.++|+|+|||++|+|++|..|+... .+..
T Consensus 151 ~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~--~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~ 221 (283)
T cd06617 151 SGYLVDSV-------AKTIDAGCKPYMAPERINPELN--QKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVV 221 (283)
T ss_pred cccccccc-------ccccccCCccccChhhcCCccc--ccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHH
Confidence 87654311 0111233457999998865211 134567899999999999999999887531 1111
Q ss_pred --------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 249 --------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 249 --------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
...+|..+.+++.+||..+|.+||++.++++| +||.+
T Consensus 222 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~-~~~~~ 266 (283)
T cd06617 222 EEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQH-PFFEL 266 (283)
T ss_pred hcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC-chhhh
Confidence 12467789999999999999999999999998 55543
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-31 Score=289.04 Aligned_cols=250 Identities=17% Similarity=0.252 Sum_probs=195.4
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
..+|++.+.||.|+ | .||+|+++.+|+.|+||++............+.+|+.+|+.++||||++++++++....+
T Consensus 4 ~~~y~~~~~lg~g~~g--~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~-- 79 (334)
T cd07855 4 GSRYKPIENIGSGAYG--VVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGAD-- 79 (334)
T ss_pred hhceeeeeeeecCCCe--EEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCC--
Confidence 35799999999987 7 999999999999999999986543334456678899999999999999999988754322
Q ss_pred CcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 97 ~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
...+|+||||+ ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 80 --~~~~~lv~e~~~~~l~~~~~~~~~---~~~~~~~~i~~qi~~aL~~LH~-~~ivH~dlkp~Nil~~~~~~~kl~dfg~ 153 (334)
T cd07855 80 --FKDVYVVMDLMESDLHHIIHSDQP---LTEEHIRYFLYQLLRGLKYIHS-ANVIHRDLKPSNLLVNEDCELRIGDFGM 153 (334)
T ss_pred --CceEEEEEehhhhhHHHHhccCCC---CCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEEcCCCcEEeccccc
Confidence 45899999999 567777754432 3345567779999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh---------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--------- 246 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l--------- 246 (771)
+.......... .........+..|+|||.+.+. ..++.++|+|||||++|+|++|.+||.....
T Consensus 154 ~~~~~~~~~~~--~~~~~~~~~~~~y~~PE~~~~~-----~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~ 226 (334)
T cd07855 154 ARGLSSSPTEH--KYFMTEYVATRWYRAPELLLSL-----PEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILS 226 (334)
T ss_pred ceeecccCcCC--CcccccccccccccChHHhcCC-----cccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHH
Confidence 87664422111 1111123445589999987542 2466789999999999999999988743210
Q ss_pred ------------------h----------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 247 ------------------R----------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 247 ------------------~----------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
. ....++..+.+++++||+.+|.+||++.+++.| +||.
T Consensus 227 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~-~~~~ 298 (334)
T cd07855 227 VLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH-PFLA 298 (334)
T ss_pred HhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC-hhhh
Confidence 0 012357788999999999999999999999998 4443
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.7e-31 Score=287.21 Aligned_cols=247 Identities=14% Similarity=0.142 Sum_probs=189.5
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCC-CchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTN-AQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~-~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.|++.+.||.|+ | +||.++++.+++.|+||++.+.. ......+.+++|+.+++.++||||++++++++.+
T Consensus 2 ~y~~~~~lG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------ 73 (331)
T cd05597 2 DFEILKVIGRGAFG--EVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDE------ 73 (331)
T ss_pred CceEEEEEEecCCe--EEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecC------
Confidence 599999999998 8 99999999999999999997532 1223456688899999999999999999999864
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
.++|+||||+ ++|.+++.+... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~e~~~g~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nill~~~~~~kl~Dfg~ 148 (331)
T cd05597 74 --NNLYLVMDYYVGGDLLTLLSKFED--RLPEDMARFYLAEMVLAIDSVHQ-LGYVHRDIKPDNVLLDKNGHIRLADFGS 148 (331)
T ss_pred --CeEEEEEecCCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh-CCeEECCCCHHHEEECCCCCEEEEECCc
Confidence 4899999999 579999876421 12344466679999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh--------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~-------- 247 (771)
+........ .......++..|+|||++...-. ....++.++|+|||||++|+|++|..||......
T Consensus 149 ~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~-~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~ 222 (331)
T cd05597 149 CLRLLADGT-----VQSNVAVGTPDYISPEILQAMED-GKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 222 (331)
T ss_pred eeecCCCCC-----ccccceeccccccCHHHHhhccc-cccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHc
Confidence 876543211 11111234558999999863100 0124567899999999999999999988543211
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCC--CCCChHHHhhCCCCCcc
Q 004157 248 ---------NTASIPKSLLPDYQRLLSSMPS--RRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 ---------~~~~IP~~l~~~i~~lL~~~P~--~Rps~~~lL~~~~fF~n 286 (771)
....++..+.+++++||...+. .|+++.++++| +||..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h-p~~~~ 271 (331)
T cd05597 223 HKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH-PFFEG 271 (331)
T ss_pred CCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC-CCCCC
Confidence 0123677789999998865443 48899999999 55543
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=278.64 Aligned_cols=247 Identities=17% Similarity=0.232 Sum_probs=191.5
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d~~~ 97 (771)
+|++.+.+|.|. | +||+|.++.+|+.|+||++............+.+|+.+++.++ ||||+++++++.....++
T Consensus 2 ~y~~~~~lg~g~~g--~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~-- 77 (295)
T cd07837 2 AYEKLEKIGEGTYG--KVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNG-- 77 (295)
T ss_pred CceEeeEecccCCe--EEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCC--
Confidence 599999999998 8 9999999999999999998765443334456788999999996 699999999987654211
Q ss_pred cccEEEEEecCC-cchHHHHHHhCCC--CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC-CCcEEEEcc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELGLE--GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ-TLDWKLHAF 173 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~~~--~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~-~G~~KL~dF 173 (771)
...+|+||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++||||+|+||+++. ++.+||+||
T Consensus 78 -~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~-~~i~H~dl~~~nil~~~~~~~~kl~df 155 (295)
T cd07837 78 -KPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHK-HGVMHRDLKPQNLLVDKQKGLLKIADL 155 (295)
T ss_pred -CceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCChHHEEEecCCCeEEEeec
Confidence 23589999999 5788877654321 223455667779999999999996 89999999999999998 899999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------- 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l------- 246 (771)
|++........ . .........|+|||++.+. ..++.++|+|||||++|+|++|.+||.....
T Consensus 156 g~~~~~~~~~~----~--~~~~~~~~~~~aPE~~~~~-----~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~ 224 (295)
T cd07837 156 GLGRAFSIPVK----S--YTHEIVTLWYRAPEVLLGS-----THYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHI 224 (295)
T ss_pred ccceecCCCcc----c--cCCcccccCCCChHHhhCC-----CCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH
Confidence 99876533111 0 0111234579999987643 3456789999999999999999987743210
Q ss_pred ---------------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 247 ---------------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 247 ---------------------------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
.....++..+.+++.+||..+|.+||++.+++.| +||
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~-~~~ 294 (295)
T cd07837 225 FKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH-PYF 294 (295)
T ss_pred HHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC-CCc
Confidence 0013467778999999999999999999999999 444
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=279.03 Aligned_cols=243 Identities=16% Similarity=0.278 Sum_probs=189.5
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.||.|. | +||+|+++.+|+.|+||++......+.....+.+|++++++++||||+++++++...
T Consensus 3 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------- 73 (294)
T PLN00009 3 QYEKVEKIGEGTYG--VVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSE------- 73 (294)
T ss_pred ceEEEEEecCCCCE--EEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecC-------
Confidence 599999999987 7 999999999999999999976544444456788999999999999999999999863
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC-CCcEEEEccCcc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ-TLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~-~G~~KL~dFgla 176 (771)
..+|+||||+ ++|..++...... ......+...+.||+.||.|||+ .+++||||+|+||+++. ++.+||+|||++
T Consensus 74 -~~~~lv~e~~~~~l~~~~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~-~~i~H~dl~p~nill~~~~~~~kl~dfg~~ 150 (294)
T PLN00009 74 -KRLYLVFEYLDLDLKKHMDSSPDF-AKNPRLIKTYLYQILRGIAYCHS-HRVLHRDLKPQNLLIDRRTNALKLADFGLA 150 (294)
T ss_pred -CeEEEEEecccccHHHHHHhCCCC-CcCHHHHHHHHHHHHHHHHHHHh-CCeeCCCCCcceEEEECCCCEEEEcccccc
Confidence 4899999999 5677777654322 12344455668999999999996 89999999999999985 557999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h-----
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R----- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~----- 247 (771)
......... .........|+|||++.+. ..+..++|+|||||++|+|++|.++|..... .
T Consensus 151 ~~~~~~~~~------~~~~~~~~~y~~PE~~~~~-----~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~ 219 (294)
T PLN00009 151 RAFGIPVRT------FTHEVVTLWYRAPEILLGS-----RHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRI 219 (294)
T ss_pred cccCCCccc------cccCceeecccCHHHHhCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 755331100 0111233479999987652 3456789999999999999999988743210 0
Q ss_pred --------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 --------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 --------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||+.+|.+||++.++++| +||.+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~-~~~~~ 289 (294)
T PLN00009 220 LGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH-EYFKD 289 (294)
T ss_pred hCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC-chHhH
Confidence 012456778899999999999999999999998 56654
|
|
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-31 Score=288.37 Aligned_cols=235 Identities=15% Similarity=0.192 Sum_probs=179.8
Q ss_pred CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHH-HHHHhcCCCCCeeEEeeeEEecccCcCCcccE
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNG-VKRLRTVRHPNILAFLHSTEVENIDATSTKIT 101 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~e-i~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~ 101 (771)
+.||.|+ | +||+|+++.+++.|+||++.+.... ......+.+| ...++.++||||+++++.++.. ..
T Consensus 1 ~~lg~G~fg--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~--------~~ 70 (325)
T cd05602 1 KVIGKGSFG--KVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTA--------DK 70 (325)
T ss_pred CeeeeCCCe--EEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcC--------Ce
Confidence 3578887 8 9999999999999999999864221 1122233333 3457889999999999999864 48
Q ss_pred EEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccccc
Q 004157 102 IYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (771)
Q Consensus 102 iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~ 179 (771)
+|+||||+ ++|..++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++...
T Consensus 71 ~~lv~e~~~~~~L~~~~~~~~~~---~~~~~~~~~~qi~~~L~~lH~-~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~ 146 (325)
T cd05602 71 LYFVLDYINGGELFYHLQRERCF---LEPRARFYAAEIASALGYLHS-LNIVYRDLKPENILLDSQGHIVLTDFGLCKEN 146 (325)
T ss_pred EEEEEeCCCCCcHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHeEECCCCCEEEccCCCCccc
Confidence 99999999 4788888764422 234455668999999999996 89999999999999999999999999998754
Q ss_pred CCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh------------h
Q 004157 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------------R 247 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l------------~ 247 (771)
..... ......++..|+|||++.+ ..++.++|+|||||++|+|++|.+||..... .
T Consensus 147 ~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~ 214 (325)
T cd05602 147 IEHNG------TTSTFCGTPEYLAPEVLHK------QPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQ 214 (325)
T ss_pred ccCCC------CcccccCCccccCHHHHcC------CCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcC
Confidence 32111 0112234568999999876 3567899999999999999999998854321 1
Q ss_pred ccCCCCcchHHHHHHHhccCCCCCCChH----HHhhCCCCCcc
Q 004157 248 NTASIPKSLLPDYQRLLSSMPSRRLNSS----KLIENSEYFQN 286 (771)
Q Consensus 248 ~~~~IP~~l~~~i~~lL~~~P~~Rps~~----~lL~~~~fF~n 286 (771)
....++..+.+++.+||+.+|.+|++.. ++++| .||..
T Consensus 215 ~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~-~~~~~ 256 (325)
T cd05602 215 LKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNH-IFFSP 256 (325)
T ss_pred CCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcC-cccCC
Confidence 1235778899999999999999999876 66666 45543
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-30 Score=271.07 Aligned_cols=241 Identities=20% Similarity=0.223 Sum_probs=193.6
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.+|.|+ | +||++.++.+|..|++|++..+.......+.+.+|++++++++||||+++++.+....
T Consensus 1 ~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~------ 72 (265)
T cd08217 1 DYEVLETIGKGSFG--TVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRS------ 72 (265)
T ss_pred CceeeeeeccCCCe--EEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCC------
Confidence 489999999987 7 9999999999999999999866555555677889999999999999999999886543
Q ss_pred ccEEEEEecCC--cchHHHHHHhCC-CCCCcHHHHHHHHHHHHHHHHHHH-----cCCCceecCCCCCCEEEcCCCcEEE
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLN-----NDCKLVHGNVCLSSVVVTQTLDWKL 170 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH-----~~~~ivH~dIkp~NI~v~~~G~~KL 170 (771)
+..+|++|||+ ++|.+++..... ........+..++.||+.||.||| + .+++||||+|+||+++.+|.+||
T Consensus 73 ~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~-~~i~h~dl~p~nili~~~~~~kl 151 (265)
T cd08217 73 NQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPG-NTVLHRDLKPANIFLDANNNVKL 151 (265)
T ss_pred CCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCcccc-CcceecCCCHHHEEEecCCCEEE
Confidence 34789999999 479988876421 122234456677999999999999 6 78999999999999999999999
Q ss_pred EccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh---
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--- 247 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~--- 247 (771)
+|||++......... .........|+|||++.+. .++.++|+|+||+++|+|++|..|+......
T Consensus 152 ~d~g~~~~~~~~~~~------~~~~~~~~~~~~pE~~~~~------~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~ 219 (265)
T cd08217 152 GDFGLAKILGHDSSF------AKTYVGTPYYMSPEQLNHM------SYDEKSDIWSLGCLIYELCALSPPFTARNQLQLA 219 (265)
T ss_pred ecccccccccCCccc------ccccccCCCccChhhhcCC------CCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHH
Confidence 999999876542210 1122345589999998763 4567899999999999999999887543211
Q ss_pred ----------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 248 ----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 248 ----------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
....++..+.+++.+||+.+|.+||++.++++|+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~ 263 (265)
T cd08217 220 SKIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLP 263 (265)
T ss_pred HHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhCC
Confidence 1124567789999999999999999999999983
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.7e-31 Score=289.88 Aligned_cols=234 Identities=12% Similarity=0.120 Sum_probs=182.1
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
..+|++.+.||.|+ | +||+|+++.++..|++|+.... ...+|+.++++++||||+++++++...
T Consensus 65 ~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~valK~~~~~--------~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 129 (357)
T PHA03209 65 SLGYTVIKTLTPGSEG--RVFVATKPGQPDPVVLKIGQKG--------TTLIEAMLLQNVNHPSVIRMKDTLVSG----- 129 (357)
T ss_pred hcCcEEEEEecCCCCe--EEEEEEECCCCceEEEEeCCcc--------ccHHHHHHHHhCCCCCCcChhheEEeC-----
Confidence 45799999999998 8 9999999999999999985432 234689999999999999999999863
Q ss_pred CcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 97 ~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
...|+|+|++ ++|..++...... .....+..++.||+.||.|||+ .+++||||||+||+++..+.+||+|||+
T Consensus 130 ---~~~~lv~e~~~~~l~~~l~~~~~~--~~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~Nill~~~~~~kl~DfG~ 203 (357)
T PHA03209 130 ---AITCMVLPHYSSDLYTYLTKRSRP--LPIDQALIIEKQILEGLRYLHA-QRIIHRDVKTENIFINDVDQVCIGDLGA 203 (357)
T ss_pred ---CeeEEEEEccCCcHHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECCCCCEEEecCcc
Confidence 3789999999 6788888654321 2334456679999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCC-CCChh----------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMR-LSKTE---------- 244 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~-p~~~~---------- 244 (771)
+........ .....++..|+|||++.+ ..++.++|+|||||++|||+++.. +|...
T Consensus 204 a~~~~~~~~-------~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~ 270 (357)
T PHA03209 204 AQFPVVAPA-------FLGLAGTVETNAPEVLAR------DKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKS 270 (357)
T ss_pred ccccccCcc-------cccccccccccCCeecCC------CCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHH
Confidence 875332110 112234458999999876 356789999999999999998543 22210
Q ss_pred ---hh----h--------------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 245 ---EL----R--------------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 245 ---~l----~--------------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.+ . ....++..+..++.+||+.||.+|||+.++|+
T Consensus 271 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~ 350 (357)
T PHA03209 271 CHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILN 350 (357)
T ss_pred HHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhc
Confidence 00 0 00134556677899999999999999999999
Q ss_pred CCCCCcc
Q 004157 280 NSEYFQN 286 (771)
Q Consensus 280 ~~~fF~n 286 (771)
| +||++
T Consensus 351 h-p~f~~ 356 (357)
T PHA03209 351 Y-PMFAQ 356 (357)
T ss_pred C-chhcc
Confidence 9 56653
|
|
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-31 Score=287.67 Aligned_cols=234 Identities=15% Similarity=0.202 Sum_probs=177.7
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHH-HHHhcCCCCCeeEEeeeEEecccCcCCcccEE
Q 004157 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGV-KRLRTVRHPNILAFLHSTEVENIDATSTKITI 102 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei-~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~i 102 (771)
.||.|+ | +||+|+++.+|+.|+||++.+.... ......+.+|. .+++.++||||+++++.++.. ..+
T Consensus 2 ~lg~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~--------~~~ 71 (321)
T cd05603 2 VIGKGSFG--KVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTA--------EKL 71 (321)
T ss_pred eeeeCCCE--EEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcC--------CEE
Confidence 578887 7 9999999999999999999864221 12223344444 467899999999999998763 489
Q ss_pred EEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccC
Q 004157 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (771)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~ 180 (771)
||||||| ++|...+..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++....
T Consensus 72 ~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~L~~lH~-~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 147 (321)
T cd05603 72 YFVLDYVNGGELFFHLQRERC---FLEPRARFYAAEVASAIGYLHS-LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGV 147 (321)
T ss_pred EEEEcCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeEeccCCHHHeEECCCCCEEEccCCCCccCC
Confidence 9999999 478887765432 2234456679999999999996 899999999999999999999999999987542
Q ss_pred CCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc------------
Q 004157 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------------ 248 (771)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~------------ 248 (771)
.... ......++..|+|||++.+ ..++.++|+|||||++|||++|..||...+...
T Consensus 148 ~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~ 215 (321)
T cd05603 148 EPEE------TTSTFCGTPEYLAPEVLRK------EPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQL 215 (321)
T ss_pred CCCC------ccccccCCcccCCHHHhcC------CCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCCC
Confidence 2111 0112234558999999875 356778999999999999999999986443211
Q ss_pred cCCCCcchHHHHHHHhccCCCCCCChH----HHhhCCCCCcc
Q 004157 249 TASIPKSLLPDYQRLLSSMPSRRLNSS----KLIENSEYFQN 286 (771)
Q Consensus 249 ~~~IP~~l~~~i~~lL~~~P~~Rps~~----~lL~~~~fF~n 286 (771)
....+..+.+++.+||+.+|.+|++.. ++++| .||.+
T Consensus 216 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~-~~~~~ 256 (321)
T cd05603 216 PGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNH-VFFSP 256 (321)
T ss_pred CCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCC-CCcCC
Confidence 123445688999999999999999764 77777 56644
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=281.96 Aligned_cols=248 Identities=16% Similarity=0.215 Sum_probs=193.6
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
+|++.+.||.|+ | +||.|.+..+++.|+||.+....... .....+.+|++.|+.++||||+++++.++..
T Consensus 2 ~y~~~~~ig~g~~g--~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------ 73 (316)
T cd05574 2 HFKKIKLLGKGDVG--RVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTE------ 73 (316)
T ss_pred ceEEeeeecCCccE--EEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecC------
Confidence 589999999998 8 99999999999999999998754332 3566788999999999999999999998763
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+|+||||+ ++|.+++..... .......+..++.||+.||.|||+ .+++||||||+||+++.+|.++|+|||+
T Consensus 74 --~~~~lv~e~~~~~~L~~~~~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~Nili~~~~~~~l~dfg~ 149 (316)
T cd05574 74 --TYLCLVMDYCPGGELFRLLQRQPG-KCLSEEVARFYAAEVLLALEYLHL-LGIVYRDLKPENILLHESGHIMLSDFDL 149 (316)
T ss_pred --CEEEEEEEecCCCCHHHHHHhCCC-CccCHHHHHHHHHHHHHHHHHHHH-CCeeccCCChHHeEEcCCCCEEEeecch
Confidence 4899999999 579888875421 122334466678999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCC-----------------------CccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHH
Q 004157 176 LSEFDGNNEAANG-----------------------PMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIY 232 (771)
Q Consensus 176 a~~~~~~~~~~~~-----------------------~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~ 232 (771)
+............ ........++..|+|||++.+ ..++.++|+|||||++|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~------~~~~~~~Di~slG~ll~ 223 (316)
T cd05574 150 SKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISG------DGHGSAVDWWTLGILLY 223 (316)
T ss_pred hhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcC------CCCCchHHHHHHHHHHH
Confidence 8765432111000 000011233447999999876 34667899999999999
Q ss_pred HHhhCCCCCChhhh----h----------ccCCCCcchHHHHHHHhccCCCCCCC----hHHHhhCCCCCcc
Q 004157 233 ELFSGMRLSKTEEL----R----------NTASIPKSLLPDYQRLLSSMPSRRLN----SSKLIENSEYFQN 286 (771)
Q Consensus 233 el~~g~~p~~~~~l----~----------~~~~IP~~l~~~i~~lL~~~P~~Rps----~~~lL~~~~fF~n 286 (771)
+|++|..||...+. . ....+|..+.+++.+||..+|.+||+ +.+++.| +||++
T Consensus 224 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~-~~~~~ 294 (316)
T cd05574 224 EMLYGTTPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH-PFFRG 294 (316)
T ss_pred HHhhCCCCCCCCchHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC-chhhc
Confidence 99999988753221 1 11225778999999999999999999 9999998 56654
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-31 Score=289.00 Aligned_cols=235 Identities=16% Similarity=0.205 Sum_probs=180.1
Q ss_pred CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHH-HHhcCCCCCeeEEeeeEEecccCcCCcccE
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVK-RLRTVRHPNILAFLHSTEVENIDATSTKIT 101 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~-~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~ 101 (771)
+.||.|+ | +||.|+++.+|+.|+||++.+.... ......+.+|.. +++.++||||+++++.++.+ ..
T Consensus 1 ~~lG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~--------~~ 70 (325)
T cd05604 1 KVIGKGSFG--KVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTT--------EK 70 (325)
T ss_pred CceeeCCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecC--------CE
Confidence 3578887 7 9999999999999999999864221 122233444544 57789999999999999863 48
Q ss_pred EEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccccc
Q 004157 102 IYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (771)
Q Consensus 102 iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~ 179 (771)
+|+||||+ +.|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++...
T Consensus 71 ~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~al~~lH~-~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~ 146 (325)
T cd05604 71 LYFVLDFVNGGELFFHLQRERS---FPEPRARFYAAEIASALGYLHS-INIVYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (325)
T ss_pred EEEEEcCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCHHHeEECCCCCEEEeecCCcccC
Confidence 99999999 468887765432 2344566679999999999996 89999999999999999999999999998754
Q ss_pred CCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh------------
Q 004157 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------------ 247 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------------ 247 (771)
..... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||...+..
T Consensus 147 ~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~ 214 (325)
T cd05604 147 IAQSD------TTTTFCGTPEYLAPEVIRK------QPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLV 214 (325)
T ss_pred CCCCC------CcccccCChhhCCHHHHcC------CCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCcc
Confidence 32111 0112234558999999876 35677999999999999999999988543211
Q ss_pred ccCCCCcchHHHHHHHhccCCCCCCCh----HHHhhCCCCCcc
Q 004157 248 NTASIPKSLLPDYQRLLSSMPSRRLNS----SKLIENSEYFQN 286 (771)
Q Consensus 248 ~~~~IP~~l~~~i~~lL~~~P~~Rps~----~~lL~~~~fF~n 286 (771)
....++..+.+++++||..+|.+||+. .++++| +||..
T Consensus 215 ~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h-~~f~~ 256 (325)
T cd05604 215 LRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEH-PFFES 256 (325)
T ss_pred CCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcC-CCcCC
Confidence 113466778899999999999999986 478887 57754
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=277.67 Aligned_cols=240 Identities=17% Similarity=0.284 Sum_probs=189.0
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~ 99 (771)
|++.+.+|.|. | +||+|+++.+|..|+||++..+.........+.+|++.++.++||||+++++++...
T Consensus 1 y~~~~~l~~g~~~--~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~-------- 70 (283)
T cd07835 1 YQKVEKIGEGTYG--VVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSE-------- 70 (283)
T ss_pred CchheEecCCCCe--EEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccC--------
Confidence 77888999987 7 999999999999999999986544444445678899999999999999999998763
Q ss_pred cEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccc
Q 004157 100 ITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (771)
Q Consensus 100 ~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~ 178 (771)
...|+||||+ .+|.+++..... .......+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||++..
T Consensus 71 ~~~~iv~e~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~i~~~L~~lH~-~~~~H~dl~p~nil~~~~~~~~l~df~~~~~ 148 (283)
T cd07835 71 NKLYLVFEFLDLDLKKYMDSSPL-TGLDPPLIKSYLYQLLQGIAYCHS-HRVLHRDLKPQNLLIDREGALKLADFGLARA 148 (283)
T ss_pred CeEEEEEeccCcCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHH-CCeeCCCCCHHHEEEcCCCcEEEeecccccc
Confidence 4899999999 578888876542 112344466679999999999996 8999999999999999999999999999876
Q ss_pred cCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh------------
Q 004157 179 FDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------------ 246 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l------------ 246 (771)
....... .........|+|||++.+. ..++.++|+|||||++|+|++|.+||.....
T Consensus 149 ~~~~~~~------~~~~~~~~~~~aPE~~~~~-----~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~ 217 (283)
T cd07835 149 FGVPVRT------YTHEVVTLWYRAPEILLGS-----RQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLG 217 (283)
T ss_pred cCCCccc------cCccccccCCCCCceeecC-----cccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence 5432110 0111224579999987652 2356789999999999999999988742210
Q ss_pred -----------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCC
Q 004157 247 -----------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEY 283 (771)
Q Consensus 247 -----------------------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~f 283 (771)
.....++..+.+++.+||+.+|.+||++.++++|.||
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 218 TPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred CCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 0013456778899999999999999999999998543
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-30 Score=270.15 Aligned_cols=237 Identities=22% Similarity=0.260 Sum_probs=192.4
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.+|.|. | .||.++.+.+++.|++|.+............+.+|+.++++++||||++++++++..
T Consensus 1 ~y~~~~~ig~g~~g--~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~------- 71 (256)
T cd08221 1 HYIPIRVLGKGAFG--EATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDD------- 71 (256)
T ss_pred CceEeeEecccCCc--eEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecC-------
Confidence 589999999998 8 888888889999999999987655555566788999999999999999999999864
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+|+||||| ++|.+++..... .......+..++.|++.+|.|||+ .+++||||+|+||+++.++.+||+|||++
T Consensus 72 -~~~~~~~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~-~~i~h~dl~p~ni~~~~~~~~kl~d~~~~ 148 (256)
T cd08221 72 -NTLLIEMEYANGGTLYDKIVRQKG-QLFEEEMVLWYLFQIVSAVSYIHK-AGILHRDIKTLNIFLTKAGLIKLGDFGIS 148 (256)
T ss_pred -CeEEEEEEecCCCcHHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCChHhEEEeCCCCEEECcCcce
Confidence 3899999999 579998876531 122344566779999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc--------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN-------- 248 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~-------- 248 (771)
......... ......+..|.|||+..+ ..++.++|+|||||++|+|++|..++.......
T Consensus 149 ~~~~~~~~~------~~~~~~~~~y~ape~~~~------~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~ 216 (256)
T cd08221 149 KILGSEYSM------AETVVGTPYYMSPELCQG------VKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQG 216 (256)
T ss_pred EEccccccc------ccccCCCccccCHhhcCC------CCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC
Confidence 766442210 111234558999999865 245678999999999999999998875432111
Q ss_pred -----cCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 249 -----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 249 -----~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
...++..+.+++.+||..+|.+||++.+++++
T Consensus 217 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 217 NYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred CCCCCccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 13356778999999999999999999999988
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-30 Score=276.58 Aligned_cols=234 Identities=18% Similarity=0.222 Sum_probs=180.0
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEEE
Q 004157 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104 (771)
Q Consensus 27 ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iyI 104 (771)
||.|+ | +||++.++.+|+.|++|++..+.... .....+..|++++++++||||+++++.++.. .++|+
T Consensus 1 lg~G~~g--~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~--------~~~~l 70 (277)
T cd05607 1 LGKGGFG--EVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESK--------THLCL 70 (277)
T ss_pred CCCCCce--EEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecC--------CeEEE
Confidence 46777 7 99999999999999999997532221 2234456799999999999999999999863 48999
Q ss_pred EecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCCC
Q 004157 105 VTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGN 182 (771)
Q Consensus 105 VtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~ 182 (771)
||||+ ++|..++....... .....+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|||++......
T Consensus 71 v~e~~~g~~L~~~~~~~~~~~-~~~~~~~~~~~qi~~al~~lH~-~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~ 148 (277)
T cd05607 71 VMSLMNGGDLKYHIYNVGERG-LEMERVIHYSAQITCGILHLHS-MDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG 148 (277)
T ss_pred EEecCCCCCHHHHHHhccccC-CCHHHHHHHHHHHHHHHHHHHH-CCEEEccCChHhEEEcCCCCEEEeeceeeeecCCC
Confidence 99999 47888776543222 2233345568999999999996 89999999999999999999999999998766432
Q ss_pred CCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-------h-h-------
Q 004157 183 NEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-------L-R------- 247 (771)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-------l-~------- 247 (771)
.. .....++..|+|||++.+. .++.++|+|||||++|+|++|..||.... + .
T Consensus 149 ~~-------~~~~~~~~~y~aPE~~~~~------~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 215 (277)
T cd05607 149 KT-------ITQRAGTNGYMAPEILKEE------PYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEV 215 (277)
T ss_pred ce-------eeccCCCCCccCHHHHccC------CCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcccc
Confidence 11 1112344589999998763 46789999999999999999998875311 0 0
Q ss_pred --ccCCCCcchHHHHHHHhccCCCCCCCh----HHHhhCCCCCcc
Q 004157 248 --NTASIPKSLLPDYQRLLSSMPSRRLNS----SKLIENSEYFQN 286 (771)
Q Consensus 248 --~~~~IP~~l~~~i~~lL~~~P~~Rps~----~~lL~~~~fF~n 286 (771)
....++..+.+++.+||+.+|.+||++ ++++.| .||+.
T Consensus 216 ~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h-~~f~~ 259 (277)
T cd05607 216 KFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKH-EFFKT 259 (277)
T ss_pred ccccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcC-hhhcC
Confidence 013467889999999999999999999 455566 55543
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=280.95 Aligned_cols=250 Identities=18% Similarity=0.247 Sum_probs=197.6
Q ss_pred hhhhhhhhcCCCCCCCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCC
Q 004157 2 FKFLKGVVGGSGAGVKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPN 80 (771)
Q Consensus 2 ~~~l~~~~~~s~~~~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPn 80 (771)
|++++..++-.. +..+|++.+.+|.|. | +||+|++..+|+.|+||.+...... ..+.+.+|+..++.++|||
T Consensus 5 ~~~~~~~~~~~~---~~~~y~~~~~lg~g~~g--~vy~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~e~~~l~~l~h~~ 77 (296)
T cd06655 5 MEKLRTIVSIGD---PKKKYTRYEKIGQGASG--TVFTAIDVATGQEVAIKQINLQKQP--KKELIINEILVMKELKNPN 77 (296)
T ss_pred HHHHHHHHhcCC---CcceEEEEEEEecCCCe--EEEEEEEcCCCcEEEEEEEecccCc--hHHHHHHHHHHHHhcCCCc
Confidence 345555553222 456799999999998 8 9999999999999999999764332 3466889999999999999
Q ss_pred eeEEeeeEEecccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCC
Q 004157 81 ILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLS 158 (771)
Q Consensus 81 Ilkv~d~~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~ 158 (771)
|+++++.+... ..+|+|+||+ ++|..++..... ....+..++.|++.||.|||+ .+++||||+|+
T Consensus 78 iv~~~~~~~~~--------~~~~lv~e~~~~~~L~~~~~~~~l----~~~~~~~i~~~l~~al~~LH~-~~i~H~dL~p~ 144 (296)
T cd06655 78 IVNFLDSFLVG--------DELFVVMEYLAGGSLTDVVTETCM----DEAQIAAVCRECLQALEFLHA-NQVIHRDIKSD 144 (296)
T ss_pred eeeeeeeEecC--------ceEEEEEEecCCCcHHHHHHhcCC----CHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHH
Confidence 99999999763 4899999999 478888876432 234566779999999999996 89999999999
Q ss_pred CEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCC
Q 004157 159 SVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM 238 (771)
Q Consensus 159 NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~ 238 (771)
||+++.+|.+||+|||++......... .........|+|||.+.+ ..++.++|+|||||++|++++|.
T Consensus 145 Nili~~~~~~kl~dfg~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slGvil~~lltg~ 212 (296)
T cd06655 145 NVLLGMDGSVKLTDFGFCAQITPEQSK------RSTMVGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMVEGE 212 (296)
T ss_pred HEEECCCCCEEEccCccchhccccccc------CCCcCCCccccCcchhcC------CCCCchhhHHHHHHHHHHHHhCC
Confidence 999999999999999998765432110 111123447999999875 34667899999999999999999
Q ss_pred CCCChhhh---------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 239 RLSKTEEL---------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 239 ~p~~~~~l---------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
.||...+. .....++..+.+++.+||..+|.+||++.+++.|+ ||
T Consensus 213 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~-~~ 272 (296)
T cd06655 213 PPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHP-FL 272 (296)
T ss_pred CCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhCh-Hh
Confidence 88754211 11234667789999999999999999999999984 44
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-30 Score=273.99 Aligned_cols=244 Identities=14% Similarity=0.191 Sum_probs=187.2
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc---hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ---DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~---~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
.+|++++.+|.|+ | .||+|.++.+|..|++|++...... ......+++|+.+++.++||||++++++++...
T Consensus 2 ~~~~~~~~lg~g~~g--~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-- 77 (266)
T cd06651 2 INWRRGKLLGQGAFG--RVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRA-- 77 (266)
T ss_pred CCccccceecCCCCE--EEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCC--
Confidence 4699999999998 8 9999999999999999998754322 234567889999999999999999999987643
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
...+|+++||+ ++|.+++...... ....+..++.||+.||.|||+ ++++||||+|+||+++.++.+||+|
T Consensus 78 ----~~~~~l~~e~~~~~~L~~~l~~~~~l---~~~~~~~~~~qi~~~l~~LH~-~~i~H~~l~p~nil~~~~~~~~l~d 149 (266)
T cd06651 78 ----EKTLTIFMEYMPGGSVKDQLKAYGAL---TESVTRKYTRQILEGMSYLHS-NMIVHRDIKGANILRDSAGNVKLGD 149 (266)
T ss_pred ----CCEEEEEEeCCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHh-CCeeeCCCCHHHEEECCCCCEEEcc
Confidence 24789999999 4799888765432 233455569999999999995 9999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----hhc
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LRN 248 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----l~~ 248 (771)
||++............ .........|+|||++.+ ..++.++|+|||||++|++++|..||.... ...
T Consensus 150 fg~~~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~ 220 (266)
T cd06651 150 FGASKRLQTICMSGTG---IRSVTGTPYWMSPEVISG------EGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFK 220 (266)
T ss_pred CCCccccccccccCCc---cccCCccccccCHHHhCC------CCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHH
Confidence 9998765431100000 011123447999999865 356678999999999999999998885322 110
Q ss_pred ------cC----CCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 249 ------TA----SIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 249 ------~~----~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
.. .+++.+..++ +|+..+|++||++.++++| +||+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h-p~~~ 265 (266)
T cd06651 221 IATQPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRH-PFAQ 265 (266)
T ss_pred HhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcC-cccc
Confidence 11 2344455566 6777899999999999998 5654
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=278.88 Aligned_cols=237 Identities=18% Similarity=0.247 Sum_probs=192.1
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
+|++.+.||.|+ | .||.+.++.+++.|+||++...... ....+.+.+|++.++++.||||+++++++...
T Consensus 2 ~y~~~~~ig~g~~~--~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------ 73 (290)
T cd05580 2 DFEFIKTLGTGSFG--RVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDD------ 73 (290)
T ss_pred ceEEEEEeecCCCe--EEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcC------
Confidence 599999999997 7 9999999999999999999754221 23456788999999999999999999999863
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||+|.||+|+.+|.+||+|||+
T Consensus 74 --~~~~~v~e~~~~~~L~~~~~~~~~---l~~~~~~~~~~qil~~l~~lH~-~~i~H~dl~p~nili~~~~~~kl~dfg~ 147 (290)
T cd05580 74 --SNLYLVMEYVPGGELFSHLRKSGR---FPEPVARFYAAQVVLALEYLHS-LDIVYRDLKPENLLLDSDGYIKITDFGF 147 (290)
T ss_pred --CeEEEEEecCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCEecCCCCHHHEEECCCCCEEEeeCCC
Confidence 4899999999 579998877543 2344566679999999999996 9999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h----
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R---- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~---- 247 (771)
+...... ......+..|++||.+.+ ...+.++|+||||+++|+|++|..|+..... .
T Consensus 148 ~~~~~~~---------~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 212 (290)
T cd05580 148 AKRVKGR---------TYTLCGTPEYLAPEIILS------KGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILE 212 (290)
T ss_pred ccccCCC---------CCCCCCCccccChhhhcC------CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Confidence 8776442 111233457999998865 3456789999999999999999988754321 1
Q ss_pred ----ccCCCCcchHHHHHHHhccCCCCCC-----ChHHHhhCCCCCcc
Q 004157 248 ----NTASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENSEYFQN 286 (771)
Q Consensus 248 ----~~~~IP~~l~~~i~~lL~~~P~~Rp-----s~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||..+|.+|+ ++.++++| +||+.
T Consensus 213 ~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~-~~~~~ 259 (290)
T cd05580 213 GKVRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNH-PWFAG 259 (290)
T ss_pred CCccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcC-ccccc
Confidence 1134567788999999999999999 88999988 56654
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=277.09 Aligned_cols=240 Identities=20% Similarity=0.282 Sum_probs=190.1
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.||.|. | .||+|+++.+++.|+||++..........+.+.+|++++++++||||+++++.+...
T Consensus 2 ~y~~~~~i~~g~~~--~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 72 (288)
T cd07833 2 KYEVLGVVGEGAYG--VVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRK------- 72 (288)
T ss_pred ceeEEEEecccCCe--eEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEEC-------
Confidence 599999999998 8 899999999999999999986554445567889999999999999999999999863
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
..+|+||||+ +.+...+..... ......+.+++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||++.
T Consensus 73 -~~~~iv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~ 148 (288)
T cd07833 73 -GRLYLVFEYVERTLLELLEASPG--GLPPDAVRSYIWQLLQAIAYCHS-HNIIHRDIKPENILVSESGVLKLCDFGFAR 148 (288)
T ss_pred -CEEEEEEecCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeEECCCCCEEEEeeeccc
Confidence 4899999999 444444333221 13455577889999999999996 899999999999999999999999999988
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-----------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----------- 246 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----------- 246 (771)
........ . .........|+|||+..+. ..++.++|+|||||++|+|++|.+++.....
T Consensus 149 ~~~~~~~~---~--~~~~~~~~~~~~PE~~~~~-----~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~ 218 (288)
T cd07833 149 ALRARPAS---P--LTDYVATRWYRAPELLVGD-----TNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCL 218 (288)
T ss_pred ccCCCccc---c--ccCcccccCCcCCchhcCC-----CCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 76543210 1 1112334579999998763 2567899999999999999999987742110
Q ss_pred -----------------h----------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 247 -----------------R----------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 247 -----------------~----------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
. ....+|..+.+++++||..+|.+||++.++++|.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~ 287 (288)
T cd07833 219 GPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPY 287 (288)
T ss_pred CCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCC
Confidence 0 00123777899999999999999999999999854
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.9e-31 Score=279.47 Aligned_cols=238 Identities=20% Similarity=0.254 Sum_probs=188.5
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.||.|. | .||+|.++.+++.|+||++..........+.+.+|++++++++||||++++++++.+
T Consensus 2 ~y~~~~~lg~g~~~--~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------- 72 (286)
T cd07846 2 KYENLGLVGEGSYG--MVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRK------- 72 (286)
T ss_pred ceeEeeeeccCCCe--EEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccC-------
Confidence 599999999998 8 999999998999999999876544444556788999999999999999999999763
Q ss_pred ccEEEEEecCCc--chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+|+||||+. .|..+...... .....+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+|||++
T Consensus 73 -~~~~lv~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~i~~~l~~LH~-~~i~h~~l~p~ni~~~~~~~~~l~dfg~~ 147 (286)
T cd07846 73 -KRLYLVFEFVDHTVLDDLEKYPNG---LDESRVRKYLFQILRGIEFCHS-HNIIHRDIKPENILVSQSGVVKLCDFGFA 147 (286)
T ss_pred -CeEEEEEecCCccHHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHH-CCccccCCCHHHEEECCCCcEEEEeeeee
Confidence 48999999993 45555443221 2344566779999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL---------- 246 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l---------- 246 (771)
......... .........|++||+..+. ..++.++|+|||||++|+|++|.+++.....
T Consensus 148 ~~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~ 216 (286)
T cd07846 148 RTLAAPGEV------YTDYVATRWYRAPELLVGD-----TKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKC 216 (286)
T ss_pred eeccCCccc------cCcccceeeccCcHHhccc-----cccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHH
Confidence 766442211 1112334589999998653 2456789999999999999999887742210
Q ss_pred ---------------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 247 ---------------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 247 ---------------------------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
.....++..+.+++.+||+.+|.+||++.++++|.+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~ 285 (286)
T cd07846 217 LGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEF 285 (286)
T ss_pred hCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCC
Confidence 001245677889999999999999999999999844
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-30 Score=274.83 Aligned_cols=237 Identities=17% Similarity=0.209 Sum_probs=184.7
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccCcCCc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d~~~~ 98 (771)
|++.+++|.|. | .||+|+++.+++.|+||++.......... ...+|+..++++. ||||+++++++++..
T Consensus 1 y~~~~~lg~g~~~--~v~~~~~~~~~~~~aik~~~~~~~~~~~~-~~~~e~~~l~~l~~h~~i~~~~~~~~~~~------ 71 (282)
T cd07831 1 YKILGKIGEGTFS--EVLKAQSRKTGKYYAIKCMKKHFKSLEQV-NNLREIQALRRLSPHPNILRLIEVLFDRK------ 71 (282)
T ss_pred CceEeeccccccc--eEEEEEEcCCCcEEEEEEehhccCCchhh-hHHHHHHHHhhcCCCCCccceEEEEecCC------
Confidence 78889999988 8 99999999999999999987643322222 3346888999886 999999999998643
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
...+|+||||+ ++|.+.+..... ......+..++.||+.||.|||+ .+++||||+|+||+++. |.+||+|||++.
T Consensus 72 ~~~~~lv~e~~~~~l~~~l~~~~~--~~~~~~~~~~~~qi~~~L~~LH~-~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~ 147 (282)
T cd07831 72 TGRLALVFELMDMNLYELIKGRKR--PLPEKRVKSYMYQLLKSLDHMHR-NGIFHRDIKPENILIKD-DILKLADFGSCR 147 (282)
T ss_pred CCcEEEEEecCCccHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHH-CCceecccCHHHEEEcC-CCeEEEeccccc
Confidence 24899999999 678877766431 12344566779999999999996 89999999999999999 999999999998
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh----------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---------- 247 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~---------- 247 (771)
....... . ........|+|||+...+ ..++.++|+|||||++|||++|.+||...+..
T Consensus 148 ~~~~~~~-----~--~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~ 215 (282)
T cd07831 148 GIYSKPP-----Y--TEYISTRWYRAPECLLTD-----GYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVL 215 (282)
T ss_pred ccccCCC-----c--CCCCCCcccCChhHhhcC-----CCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHc
Confidence 6643211 0 112334579999976442 34567899999999999999998887532100
Q ss_pred -------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 248 -------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 248 -------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
....++..+.+++.+||+.+|.+||++.++++|+|
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~ 281 (282)
T cd07831 216 GTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPY 281 (282)
T ss_pred CCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCC
Confidence 01245778999999999999999999999999954
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=274.40 Aligned_cols=237 Identities=16% Similarity=0.227 Sum_probs=192.1
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.+|.|+ | .||+|+++.+++.|+||++..... ......+.+|+++++.++||||+++++.+..+
T Consensus 2 ~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------- 71 (274)
T cd06609 2 LFTLLECIGKGSFG--EVYKAIDKRTNQVVAIKVIDLEEA-EDEIEDIQQEIQFLSQCRSPYITKYYGSFLKG------- 71 (274)
T ss_pred hhhhhhhhcCCCCe--EEEEEEECCCCeEEEEEEeecccc-chHHHHHHHHHHHHHHcCCCCeeeeeEEEEEC-------
Confidence 588999999987 7 999999999999999999986532 23455678999999999999999999998764
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+|+|+||+ ++|.+++.... .....+.+++.||+.||.|||+ .+++||||+|+||+++.+|.++|+|||++
T Consensus 72 -~~~~~v~e~~~~~~L~~~~~~~~----~~~~~~~~~~~ql~~~l~~lh~-~~i~h~dl~p~ni~i~~~~~~~l~d~g~~ 145 (274)
T cd06609 72 -SKLWIIMEYCGGGSCLDLLKPGK----LDETYIAFILREVLLGLEYLHE-EGKIHRDIKAANILLSEEGDVKLADFGVS 145 (274)
T ss_pred -CeEEEEEEeeCCCcHHHHHhhcC----CCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEECCCCCEEEcccccc
Confidence 4899999999 47988887652 2345577779999999999996 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh--------c
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--------N 248 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~--------~ 248 (771)
......... .........|++||++.+. .++.++|+|||||++|++++|..|+...... .
T Consensus 146 ~~~~~~~~~------~~~~~~~~~y~~PE~~~~~------~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~ 213 (274)
T cd06609 146 GQLTSTMSK------RNTFVGTPFWMAPEVIKQS------GYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKN 213 (274)
T ss_pred eeecccccc------cccccCCccccChhhhccC------CCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhc
Confidence 877542110 1112334479999998763 4678999999999999999999887532110 0
Q ss_pred -----cC-CCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 249 -----TA-SIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 249 -----~~-~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
.. .+|..+.+++.+||..+|.+||++.++++|+ ||.
T Consensus 214 ~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~-~~~ 255 (274)
T cd06609 214 NPPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHK-FIK 255 (274)
T ss_pred CCCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhhCh-hhc
Confidence 01 2677899999999999999999999999984 443
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.2e-31 Score=292.94 Aligned_cols=239 Identities=15% Similarity=0.213 Sum_probs=186.4
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECC--CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKD--DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~--~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
...|++.+.||.|+ | +||.+..+. ++..|+||.+... ....+|+++|++|+||||+++++.+..+
T Consensus 91 ~~~y~i~~~Lg~G~~g--~Vy~~~~~~~~~~~~v~vK~~~~~-------~~~~~E~~il~~l~h~~iv~~~~~~~~~--- 158 (392)
T PHA03207 91 RMQYNILSSLTPGSEG--EVFVCTKHGDEQRKKVIVKAVTGG-------KTPGREIDILKTISHRAIINLIHAYRWK--- 158 (392)
T ss_pred cCceEEEEeecCCCCe--EEEEEEEcCCccceeEEEEecccc-------ccHHHHHHHHHhcCCCCccceeeeEeeC---
Confidence 45699999999998 8 999998653 4578999987642 1345799999999999999999999864
Q ss_pred cCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 95 ATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+|+|||++ ++|.+++..... .....+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+||
T Consensus 159 -----~~~~lv~e~~~~~l~~~l~~~~~---l~~~~~~~i~~ql~~aL~~LH~-~givHrDlkp~Nill~~~~~~~l~Df 229 (392)
T PHA03207 159 -----STVCMVMPKYKCDLFTYVDRSGP---LPLEQAITIQRRLLEALAYLHG-RGIIHRDVKTENIFLDEPENAVLGDF 229 (392)
T ss_pred -----CEEEEEehhcCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCccccCCCHHHEEEcCCCCEEEccC
Confidence 3899999999 578888854332 2344466779999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------- 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l------- 246 (771)
|++........ ....+.+.++..|+|||++.+ ..++.++|+|||||++|||++|..||.....
T Consensus 230 G~a~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l 299 (392)
T PHA03207 230 GAACKLDAHPD----TPQCYGWSGTLETNSPELLAL------DPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQL 299 (392)
T ss_pred ccccccCcccc----cccccccccccCccCHhHhcC------CCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHH
Confidence 99976654211 111223455668999999876 3567899999999999999999877643210
Q ss_pred hc------------------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 247 RN------------------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 247 ~~------------------------------------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
.. ...++..+.+++.+||..+|.+||++.++|.| +||
T Consensus 300 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~-p~f 378 (392)
T PHA03207 300 RSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL-PLF 378 (392)
T ss_pred HHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC-chh
Confidence 00 01234567778999999999999999999999 566
Q ss_pred cchh
Q 004157 285 QNKL 288 (771)
Q Consensus 285 ~n~l 288 (771)
...-
T Consensus 379 ~~~~ 382 (392)
T PHA03207 379 TKEP 382 (392)
T ss_pred hccc
Confidence 5433
|
|
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=273.22 Aligned_cols=242 Identities=17% Similarity=0.278 Sum_probs=190.3
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc----hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ----DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~----~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
+|++++.||.|. | .||.|..+.+++.|+||++...... ......+++|++.|++++||||+++++.+...
T Consensus 1 ~~~~~~~lg~g~~~--~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--- 75 (268)
T cd06630 1 EWLKGQQLGTGAFS--SCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCED--- 75 (268)
T ss_pred CccccceecCcCce--EEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccC---
Confidence 489999999998 8 9999999999999999999754321 23467889999999999999999999999763
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC-cEEEE
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL-DWKLH 171 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G-~~KL~ 171 (771)
..+|+|+||+ ++|.+++++... .....+..++.||+.||.|||+ .+++|+||+|+||+++.+| .+||+
T Consensus 76 -----~~~~~v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~ql~~al~~LH~-~~i~H~~i~~~nil~~~~~~~~~l~ 146 (268)
T cd06630 76 -----SHFNLFVEWMAGGSVSHLLSKYGA---FKEAVIINYTEQLLRGLSYLHE-NQIIHRDVKGANLLIDSTGQRLRIA 146 (268)
T ss_pred -----CeEEEEEeccCCCcHHHHHHHhCC---CCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCCCEEEEc
Confidence 4899999999 479998876542 2234456669999999999996 8999999999999998876 59999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc---
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN--- 248 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~--- 248 (771)
|||++........... ........+..|+|||++.+ ..++.++|+|+|||++|++++|..|+.......
T Consensus 147 dfg~~~~~~~~~~~~~--~~~~~~~~~~~~~~PE~~~~------~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~ 218 (268)
T cd06630 147 DFGAAARLAAKGTGAG--EFQGQLLGTIAFMAPEVLRG------EQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLA 218 (268)
T ss_pred ccccccccccccccCC--ccccccccccceeCHhHhcc------CCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHH
Confidence 9999877654311110 01111233458999999865 356678999999999999999998875332110
Q ss_pred ----------c----CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 249 ----------T----ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 249 ----------~----~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
. ..++..+.+++.+||..+|..||++.++++| +||
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~-~~~ 267 (268)
T cd06630 219 LIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH-PVF 267 (268)
T ss_pred HHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcC-ccc
Confidence 1 1345678889999999999999999999998 454
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-30 Score=270.07 Aligned_cols=237 Identities=21% Similarity=0.230 Sum_probs=190.9
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.+|.|. | .||.+.++.+++.|+||.+............+.+|+++|++++||||+++++.+..+
T Consensus 1 ~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------- 71 (256)
T cd08220 1 KYEKIRVVGRGAFG--IVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLED------- 71 (256)
T ss_pred CceEEEEecccCce--EEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecC-------
Confidence 589999999997 7 999999999999999999987654555567889999999999999999999998753
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC-cEEEEccCc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL-DWKLHAFDV 175 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G-~~KL~dFgl 175 (771)
..+|+||||+ ++|.+++....... .....+..++.|++.+|.|||+ ++++||||+|+||+++.++ ..||+|||+
T Consensus 72 -~~~~lv~e~~~~~~L~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~~~nil~~~~~~~~~l~d~~~ 148 (256)
T cd08220 72 -KALMIVMEYAPGGTLAEYIQKRCNSL-LDEDTILHFFVQILLALHHVHT-KLILHRDLKTQNILLDKHKMVVKIGDFGI 148 (256)
T ss_pred -CEEEEEEecCCCCCHHHHHHHhcccC-CCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCCCEEEEccCCC
Confidence 4899999999 47999987653211 2334456669999999999996 9999999999999998655 579999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh--------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~-------- 247 (771)
+........ .........|+|||.+.+ ..++.++|+||||+++|+|++|..++...+..
T Consensus 149 ~~~~~~~~~-------~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~ 215 (256)
T cd08220 149 SKILSSKSK-------AYTVVGTPCYISPELCEG------KPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMS 215 (256)
T ss_pred ceecCCCcc-------ccccccCCcccCchhccC------CCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHh
Confidence 987644211 111233458999999875 34667899999999999999998887543211
Q ss_pred -----ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 248 -----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 248 -----~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
....++..+.+++.+||..+|.+||++.++++|+
T Consensus 216 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p 254 (256)
T cd08220 216 GTFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQP 254 (256)
T ss_pred cCCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCC
Confidence 1134667799999999999999999999999984
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-30 Score=275.26 Aligned_cols=247 Identities=16% Similarity=0.200 Sum_probs=191.2
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
+...|++.+++|.|+ | .||+|.++.++..|++|++.... ....+.+.+|+++++.++||||+++++.+..+
T Consensus 10 ~~~~y~i~~~lg~g~~g--~vy~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---- 81 (292)
T cd06644 10 PNEVWEIIGELGDGAFG--KVYKAKNKETGALAAAKVIETKS--EEELEDYMVEIEILATCNHPYIVKLLGAFYWD---- 81 (292)
T ss_pred cchhhhhhheecCCCCe--EEEEEEECCCCceEEEEEeccCC--HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeC----
Confidence 456799999999998 7 99999999999999999997542 33466788899999999999999999998864
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+|+||||+ +.|..++.+... ......+..++.||+.+|.|||+ .+++||||+|+||+++.+|.+||+||
T Consensus 82 ----~~~~lv~e~~~~~~l~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lH~-~~i~H~dlkp~Nili~~~~~~kl~df 154 (292)
T cd06644 82 ----GKLWIMIEFCPGGAVDAIMLELDR--GLTEPQIQVICRQMLEALQYLHS-MKIIHRDLKAGNVLLTLDGDIKLADF 154 (292)
T ss_pred ----CeEEEEEecCCCCcHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhc-CCeeecCCCcceEEEcCCCCEEEccC
Confidence 3899999999 457776654322 12334566679999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------- 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l------- 246 (771)
|++........ ..........|+|||++.+.... ...++.++|+|||||++|+|++|.+|+.....
T Consensus 155 g~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~-~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~ 227 (292)
T cd06644 155 GVSAKNVKTLQ------RRDSFIGTPYWMAPEVVMCETMK-DTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKI 227 (292)
T ss_pred ccceecccccc------ccceecCCccccCceeecccccc-CCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHH
Confidence 99865432110 01122334589999998532100 12356789999999999999999988754221
Q ss_pred --------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 247 --------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 247 --------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
.....++..+.+++.+||+.+|.+||++.++++| +||.+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~-~~~~~ 274 (292)
T cd06644 228 AKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH-PFVSS 274 (292)
T ss_pred hcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC-ccccc
Confidence 0112345678899999999999999999999998 55543
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-30 Score=270.12 Aligned_cols=236 Identities=17% Similarity=0.202 Sum_probs=190.3
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
...|++.+.++.|. | .||+|+.+.++..|++|.+.... ..+.+.+|++.+++++||||+++++.+...
T Consensus 2 ~~~y~~~~~i~~g~~~--~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~----- 70 (256)
T cd06612 2 EEVFDILEKLGEGSYG--SVYKAIHKETGQVVAIKVVPVEE----DLQEIIKEISILKQCDSPYIVKYYGSYFKN----- 70 (256)
T ss_pred cccchhhhhhcCCCCe--EEEEEEEcCCCcEEEEEEeecHH----HHHHHHHHHHHHHhCCCCcEeeeeeeeecC-----
Confidence 45799999999997 7 99999999889999999997532 256789999999999999999999999864
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+|+++|++ ++|.+++..... ......+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||
T Consensus 71 ---~~~~l~~e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~~l~~~l~~lh~-~~i~H~dl~~~ni~~~~~~~~~l~dfg 144 (256)
T cd06612 71 ---TDLWIVMEYCGAGSVSDIMKITNK--TLTEEEIAAILYQTLKGLEYLHS-NKKIHRDIKAGNILLNEEGQAKLADFG 144 (256)
T ss_pred ---CcEEEEEecCCCCcHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCcceEEECCCCcEEEcccc
Confidence 4899999999 479888865432 12344566779999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh--------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------- 246 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-------- 246 (771)
++......... .........|+|||++.+ ..++.++|+|||||++|+|++|..|+.....
T Consensus 145 ~~~~~~~~~~~------~~~~~~~~~y~~PE~~~~------~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~ 212 (256)
T cd06612 145 VSGQLTDTMAK------RNTVIGTPFWMAPEVIQE------IGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIP 212 (256)
T ss_pred cchhcccCccc------cccccCCccccCHHHHhc------CCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhc
Confidence 98876542210 111123447999999865 3566789999999999999999988753211
Q ss_pred -------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 247 -------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 247 -------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
.....++..+.+++.+|++.+|.+||++.+++.|.+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~ 255 (256)
T cd06612 213 NKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPF 255 (256)
T ss_pred cCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCC
Confidence 011235567899999999999999999999999843
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-30 Score=295.73 Aligned_cols=238 Identities=18% Similarity=0.174 Sum_probs=184.5
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
..+.|.+.+.||.|+ | .||+|+++.+++.|+||.... ....+|+++|++|+||||+++++++...
T Consensus 167 ~~~gy~i~~~Lg~G~~G--~Vy~a~~~~~~~~vavK~~~~--------~~~~~E~~iL~~L~HpnIv~l~~~~~~~---- 232 (461)
T PHA03211 167 AGLGFAIHRALTPGSEG--CVFESSHPDYPQRVVVKAGWY--------ASSVHEARLLRRLSHPAVLALLDVRVVG---- 232 (461)
T ss_pred ccCCeEEEEEEccCCCe--EEEEEEECCCCCEEEEecccc--------cCHHHHHHHHHHCCCCCCCcEEEEEEEC----
Confidence 356799999999998 8 999999999999999996432 2356899999999999999999998763
Q ss_pred CCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 96 ~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
...|+|||++ +.|..++..... ......+..++.||+.||.|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 233 ----~~~~lv~e~~~~~L~~~l~~~~~--~l~~~~~~~i~~qi~~aL~yLH~-~gIvHrDLKP~NILl~~~~~vkL~DFG 305 (461)
T PHA03211 233 ----GLTCLVLPKYRSDLYTYLGARLR--PLGLAQVTAVARQLLSAIDYIHG-EGIIHRDIKTENVLVNGPEDICLGDFG 305 (461)
T ss_pred ----CEEEEEEEccCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH-CCEEECcCCHHHEEECCCCCEEEcccC
Confidence 3789999999 678888765432 12344566779999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCC-CCChh---------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMR-LSKTE--------- 244 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~-p~~~~--------- 244 (771)
+++........ .......++..|++||++.+ ..++.++|+|||||++|||++|.. +|...
T Consensus 306 la~~~~~~~~~----~~~~~~~GT~~Y~APE~~~~------~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~ 375 (461)
T PHA03211 306 AACFARGSWST----PFHYGIAGTVDTNAPEVLAG------DPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYD 375 (461)
T ss_pred Cceeccccccc----ccccccCCCcCCcCHHHHcC------CCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcH
Confidence 99765432110 11122234558999999876 356789999999999999988653 22110
Q ss_pred -hh----hc---------------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 245 -EL----RN---------------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 245 -~l----~~---------------------------------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
++ .. ...++..+.+++++||+.||.+||++.++|+|
T Consensus 376 ~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 376 AQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred HHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 00 00 01233467889999999999999999999999
Q ss_pred CCCCcc
Q 004157 281 SEYFQN 286 (771)
Q Consensus 281 ~~fF~n 286 (771)
.||++
T Consensus 456 -p~f~~ 460 (461)
T PHA03211 456 -PLFQS 460 (461)
T ss_pred -cccCC
Confidence 66654
|
|
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.7e-31 Score=284.18 Aligned_cols=235 Identities=15% Similarity=0.193 Sum_probs=181.0
Q ss_pred CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhc-CCCCCeeEEeeeEEecccCcCCcccE
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRT-VRHPNILAFLHSTEVENIDATSTKIT 101 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~-LrHPnIlkv~d~~e~e~~d~~~~~~~ 101 (771)
+.||.|+ | +||+|+++.+++.|+||++..... .+........|...++. ++||||+++++++++. ..
T Consensus 1 ~~lG~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~--------~~ 70 (316)
T cd05619 1 KMLGKGSFG--KVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTK--------EN 70 (316)
T ss_pred CeeeeCCCE--EEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeC--------CE
Confidence 3578887 8 999999999999999999986421 11233455667777775 5899999999999863 48
Q ss_pred EEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccccc
Q 004157 102 IYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (771)
Q Consensus 102 iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~ 179 (771)
+||||||+ ++|..++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++...
T Consensus 71 ~~lv~ey~~~g~L~~~l~~~~~~---~~~~~~~~~~qi~~al~~LH~-~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~ 146 (316)
T cd05619 71 LFFVMEYLNGGDLMFHIQSCHKF---DLPRATFYAAEIICGLQFLHS-KGIVYRDLKLDNILLDTDGHIKIADFGMCKEN 146 (316)
T ss_pred EEEEEeCCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHh-CCeEeCCCCHHHEEECCCCCEEEccCCcceEC
Confidence 99999999 5799888765322 233355669999999999996 89999999999999999999999999998754
Q ss_pred CCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc-----------
Q 004157 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN----------- 248 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~----------- 248 (771)
..... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||.......
T Consensus 147 ~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~ 214 (316)
T cd05619 147 MLGDA------KTCTFCGTPDYIAPEILLG------QKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPC 214 (316)
T ss_pred CCCCC------ceeeecCCccccCHHHHcC------CCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC
Confidence 22111 0112234558999999876 356789999999999999999999885432111
Q ss_pred -cCCCCcchHHHHHHHhccCCCCCCChH-HHhhCCCCCcc
Q 004157 249 -TASIPKSLLPDYQRLLSSMPSRRLNSS-KLIENSEYFQN 286 (771)
Q Consensus 249 -~~~IP~~l~~~i~~lL~~~P~~Rps~~-~lL~~~~fF~n 286 (771)
...++..+.+++.+||..+|.+|+++. ++++| +||..
T Consensus 215 ~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h-~~~~~ 253 (316)
T cd05619 215 YPRWLTREAKDILVKLFVREPERRLGVKGDIRQH-PFFRE 253 (316)
T ss_pred CCccCCHHHHHHHHHHhccCHhhcCCChHHHHcC-cccCC
Confidence 123556788999999999999999996 67666 67755
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-30 Score=279.74 Aligned_cols=255 Identities=19% Similarity=0.321 Sum_probs=191.7
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
..+|++.+.||.|+ | .||+|+++.+++.|+||++......+.....+.+|++.++.++||||+++++.+.......+
T Consensus 7 ~~~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 84 (311)
T cd07866 7 LRDYEILGKLGEGTFG--EVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSK 84 (311)
T ss_pred cccEEEEEEeccCCCE--EEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccc
Confidence 45799999999998 7 99999999999999999998654444334467789999999999999999998865432211
Q ss_pred CcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 97 ~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
.....+|+|+||+ ..|...+..... ......+..++.||++||.|||+ .+++||||+|+||+++.+|.+||+|||+
T Consensus 85 ~~~~~~~lv~~~~~~~l~~~~~~~~~--~~~~~~~~~i~~~l~~al~~lH~-~~i~H~dl~p~nil~~~~~~~~l~dfg~ 161 (311)
T cd07866 85 RKRGSVYMVTPYMDHDLSGLLENPSV--KLTESQIKCYMLQLLEGINYLHE-NHILHRDIKAANILIDNQGILKIADFGL 161 (311)
T ss_pred ccCceEEEEEecCCcCHHHHHhcccc--CCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEECCCCCEEECcCcc
Confidence 2245789999999 457666654321 23455577789999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCC----Cccc-cccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh---
Q 004157 176 LSEFDGNNEAANG----PMLQ-YAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~----~~~~-~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~--- 247 (771)
+............ .... ........|+|||++.+. ..++.++|+|||||++|+|++|.++|......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~ 236 (311)
T cd07866 162 ARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGE-----RRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQL 236 (311)
T ss_pred chhccCCCcccccCCcccccccccceeccCcCChHHhhCC-----CccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 9765432211110 0001 111223479999987653 34667899999999999999999887432100
Q ss_pred ---------------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 248 ---------------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 248 ---------------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
....+...+.+++.+||+.+|.+||++.+++.|++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~ 310 (311)
T cd07866 237 HLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPY 310 (311)
T ss_pred HHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCC
Confidence 00123356778999999999999999999999843
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-30 Score=286.91 Aligned_cols=241 Identities=18% Similarity=0.231 Sum_probs=189.0
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
.-+|++.+.||.|+ | +||.|+++.+|+.|+||++.+..........+.+|++++++++||||+++++++......
T Consensus 15 ~~~y~~~~~lg~g~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~-- 90 (353)
T cd07850 15 LKRYQNLKPIGSGAQG--IVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSL-- 90 (353)
T ss_pred hcceEEEEEeccCCCE--EEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCc--
Confidence 34699999999998 8 999999999999999999876544444456677899999999999999999998643210
Q ss_pred CcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 97 ~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
......|+||||+ ++|.+.+... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 91 ~~~~~~~lv~e~~~~~l~~~~~~~-----l~~~~~~~~~~ql~~aL~~LH~-~gi~H~dlkp~Nil~~~~~~~kL~Dfg~ 164 (353)
T cd07850 91 EEFQDVYLVMELMDANLCQVIQMD-----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGL 164 (353)
T ss_pred cccCcEEEEEeccCCCHHHHHhhc-----CCHHHHHHHHHHHHHHHHHHHh-CCeeeCCCCHHHEEECCCCCEEEccCcc
Confidence 0123689999999 5687777643 2234466779999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh--------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~-------- 247 (771)
+....... .......+..|+|||++.+ ..++.++|+|||||++|+|++|..+|...+..
T Consensus 165 ~~~~~~~~-------~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~ 231 (353)
T cd07850 165 ARTAGTSF-------MMTPYVVTRYYRAPEVILG------MGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIE 231 (353)
T ss_pred ceeCCCCC-------CCCCCcccccccCHHHHhC------CCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Confidence 97654321 1112234457999999875 35678999999999999999998877422100
Q ss_pred ---------------------------------c--------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 ---------------------------------N--------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 ---------------------------------~--------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
. ....+..+.+++.+||..+|.+||++.++|.|
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 232 QLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred hcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 00124457889999999999999999999998
Q ss_pred C
Q 004157 281 S 281 (771)
Q Consensus 281 ~ 281 (771)
+
T Consensus 312 ~ 312 (353)
T cd07850 312 P 312 (353)
T ss_pred h
Confidence 4
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-31 Score=287.52 Aligned_cols=226 Identities=17% Similarity=0.272 Sum_probs=184.3
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEEE
Q 004157 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iyI 104 (771)
=+|+|. | .||.|+.+ ++.||||++. ++-..+|+-|++|+|||||.|.+++... ..+||
T Consensus 131 WlGSGaQG--AVF~Grl~--netVAVKKV~---------elkETdIKHLRkLkH~NII~FkGVCtqs--------PcyCI 189 (904)
T KOG4721|consen 131 WLGSGAQG--AVFLGRLH--NETVAVKKVR---------ELKETDIKHLRKLKHPNIITFKGVCTQS--------PCYCI 189 (904)
T ss_pred hhccCccc--ceeeeecc--CceehhHHHh---------hhhhhhHHHHHhccCcceeeEeeeecCC--------ceeEE
Confidence 468888 9 89999876 8999999865 2234579999999999999999999763 48999
Q ss_pred EecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCCC
Q 004157 105 VTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGN 182 (771)
Q Consensus 105 VtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~ 182 (771)
||||| +.|+++|+..... .....+.| ..+|+.|+.|||. .+|||||||.-||+|+.+..+||+|||-++...+.
T Consensus 190 iMEfCa~GqL~~VLka~~~i--tp~llv~W-sk~IA~GM~YLH~-hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~ 265 (904)
T KOG4721|consen 190 IMEFCAQGQLYEVLKAGRPI--TPSLLVDW-SKGIAGGMNYLHL-HKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK 265 (904)
T ss_pred eeeccccccHHHHHhccCcc--CHHHHHHH-HHHhhhhhHHHHH-hhHhhhccCCCceEeeccceEEeccccchHhhhhh
Confidence 99999 7899999986532 12233334 8899999999996 89999999999999999999999999999877652
Q ss_pred CCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh--------------hc
Q 004157 183 NEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--------------RN 248 (771)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l--------------~~ 248 (771)
. ....+.++..|||||++++ .....++||||||+++|||++|..|+..-+- ..
T Consensus 266 S-------TkMSFaGTVaWMAPEvIrn------ePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~Lpv 332 (904)
T KOG4721|consen 266 S-------TKMSFAGTVAWMAPEVIRN------EPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPV 332 (904)
T ss_pred h-------hhhhhhhhHhhhCHHHhhc------CCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccC
Confidence 1 1233455669999999987 4677899999999999999999988754321 12
Q ss_pred cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcchhh
Q 004157 249 TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKLV 289 (771)
Q Consensus 249 ~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n~lv 289 (771)
....|+.+.=++++|++..|..||++.+++.|..+|.-.+.
T Consensus 333 PstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~pell 373 (904)
T KOG4721|consen 333 PSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASPELL 373 (904)
T ss_pred cccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCHHHh
Confidence 24678888889999999999999999999999777765443
|
|
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-30 Score=278.33 Aligned_cols=250 Identities=19% Similarity=0.276 Sum_probs=191.7
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc--C
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI--D 94 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~--d 94 (771)
...|++.+.+|.|. | +||+|+++.+|+.|+||++......+.....+.+|++.+++++||||+++++++..... +
T Consensus 6 ~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 6 VDKFDIIGQIGEGTYG--QVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhheeeeecccCCE--EEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 35699999999997 7 99999999999999999998654444445567889999999999999999999875320 0
Q ss_pred cCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 95 ATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
.......+|+|+||+ +.|...+.... .......+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+||
T Consensus 84 ~~~~~~~~~lv~e~~~~~l~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~-~~i~H~dl~p~nili~~~~~~kl~df 160 (302)
T cd07864 84 FKKDKGAFYLVFEYMDHDLMGLLESGL--VHFSEDHIKSFMKQLLEGLNYCHK-KNFLHRDIKCSNILLNNKGQIKLADF 160 (302)
T ss_pred ccccCCcEEEEEcccCccHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEECCCCcEEeCcc
Confidence 000123799999999 45766665432 123344566779999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------- 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l------- 246 (771)
|++......... + .........|++||.+.+. ...+.++|+|||||++|+|++|.++|.....
T Consensus 161 g~~~~~~~~~~~---~--~~~~~~~~~y~~PE~~~~~-----~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~ 230 (302)
T cd07864 161 GLARLYNSEESR---P--YTNKVITLWYRPPELLLGE-----ERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELI 230 (302)
T ss_pred cccccccCCccc---c--cccceeccCccChHHhcCC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence 999866542210 0 0111234479999987542 2356789999999999999999987753210
Q ss_pred -----------------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 247 -----------------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 247 -----------------------------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
.....+|..+.+++.+||+.+|.+||++.+++.|.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~ 301 (302)
T cd07864 231 SRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPW 301 (302)
T ss_pred HHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 011246888999999999999999999999999843
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-30 Score=279.12 Aligned_cols=238 Identities=17% Similarity=0.243 Sum_probs=191.8
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
...+|++.+.||.|. | .||+|+++.+|+.|+||.+...... ..+.+.+|+..++.++||||+++++.++..
T Consensus 17 ~~~~y~~~~~lg~g~~g--~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~---- 88 (297)
T cd06656 17 PKKKYTRFEKIGQGASG--TVYTAIDIATGQEVAIKQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLVG---- 88 (297)
T ss_pred hhhhceeeeeeccCCCe--EEEEEEECCCCCEEEEEEEecCccc--hHHHHHHHHHHHHhCCCCCEeeEEEEEecC----
Confidence 457899999999998 8 8999999999999999999764333 345678999999999999999999999863
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
.++|+||||+ ++|.+++.+... ....+..++.|++.||.|||+ .+++||||+|+||+++.+|.+||+||
T Consensus 89 ----~~~~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~l~~~L~~LH~-~~i~H~dL~p~Nili~~~~~~~l~Df 159 (297)
T cd06656 89 ----DELWVVMEYLAGGSLTDVVTETCM----DEGQIAAVCRECLQALDFLHS-NQVIHRDIKSDNILLGMDGSVKLTDF 159 (297)
T ss_pred ----CEEEEeecccCCCCHHHHHHhCCC----CHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECCCCCEEECcC
Confidence 4899999999 478888876432 234456679999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-h-----
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-R----- 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-~----- 247 (771)
|++......... .........|++||...+ ..++.++|+|||||++|++++|..||...+. .
T Consensus 160 g~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~ 227 (297)
T cd06656 160 GFCAQITPEQSK------RSTMVGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI 227 (297)
T ss_pred ccceEccCCccC------cCcccCCccccCHHHHcC------CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeee
Confidence 998765432110 111223447999999875 3566789999999999999999988754321 0
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 248 ---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 248 ---------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
....++..+.+++.+||..+|.+||++.++++|+ ||
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~-~~ 272 (297)
T cd06656 228 ATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHP-FL 272 (297)
T ss_pred ccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCc-hh
Confidence 1134566788999999999999999999999984 44
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=285.09 Aligned_cols=247 Identities=20% Similarity=0.310 Sum_probs=190.8
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.+|++.+.||.|+ | .||.|+++.+|+.|+||++..... ......+.+|+.+++.++||||+++++++......
T Consensus 5 ~~y~i~~~lg~G~~g--~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~--- 78 (336)
T cd07849 5 PRYQNLSYIGEGAYG--MVCSATHKPTGVKVAIKKISPFEH-QTFCQRTLREIKILRRFKHENIIGILDIIRPPSFE--- 78 (336)
T ss_pred cceEEEEEEEecCCe--EEEEEEEcCCCCeEEEEEeccccc-chhHHHHHHHHHHHHhCCCCCcCchhheeeccccc---
Confidence 4699999999998 8 999999999999999999864322 23455677899999999999999999987653311
Q ss_pred cccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
....+|+|+||+ ++|.+.+....+ ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 79 ~~~~~~lv~e~~~~~l~~~~~~~~l----~~~~~~~i~~ql~~aL~~LH~-~~ivH~dlkp~Nill~~~~~~kl~dfg~~ 153 (336)
T cd07849 79 SFNDVYIVQELMETDLYKLIKTQHL----SNDHIQYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTNCDLKICDFGLA 153 (336)
T ss_pred ccceEEEEehhcccCHHHHHhcCCC----CHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHEEECCCCCEEECcccce
Confidence 134789999999 567777765432 344567779999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL---------- 246 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l---------- 246 (771)
........... ......++..|+|||.+.+. ..++.++|+|||||++|+|++|.++|...+.
T Consensus 154 ~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~-----~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~ 225 (336)
T cd07849 154 RIADPEHDHTG---FLTEYVATRWYRAPEIMLNS-----KGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGV 225 (336)
T ss_pred eeccccccccC---CcCCcCcCCCccChHHhhCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 76543211110 01122345579999986542 3466789999999999999999988743210
Q ss_pred ---------h------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 247 ---------R------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 247 ---------~------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
. ....++..+.+++.+||+.+|.+||++.++++| +||.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h-p~~~ 296 (336)
T cd07849 226 LGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH-PYLE 296 (336)
T ss_pred cCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC-cccc
Confidence 0 012346678899999999999999999999999 4554
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=284.24 Aligned_cols=235 Identities=15% Similarity=0.212 Sum_probs=184.4
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccCcCCcccEE
Q 004157 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDATSTKITI 102 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d~~~~~~~i 102 (771)
.||.|+ | +||+|.++.+++.|+||++.+.... +.....+.+|+.+++++ +||||++++++++.. ..+
T Consensus 2 ~lG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~--------~~~ 71 (327)
T cd05617 2 VIGRGSYA--KVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTT--------SRL 71 (327)
T ss_pred eeeeCCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeC--------CEE
Confidence 578887 7 9999999999999999999864322 23456788899999888 599999999999863 489
Q ss_pred EEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccC
Q 004157 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (771)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~ 180 (771)
|+||||+ ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++....
T Consensus 72 ~lv~e~~~~~~L~~~~~~~~~---l~~~~~~~~~~qi~~al~~lH~-~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~ 147 (327)
T cd05617 72 FLVIEYVNGGDLMFHMQRQRK---LPEEHARFYAAEICIALNFLHE-RGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGL 147 (327)
T ss_pred EEEEeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHEEEeCCCCEEEeccccceecc
Confidence 9999999 478888876432 2344566679999999999996 899999999999999999999999999987532
Q ss_pred CCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----------h----
Q 004157 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----------L---- 246 (771)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----------l---- 246 (771)
.... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||.... +
T Consensus 148 ~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~ 215 (327)
T cd05617 148 GPGD------TTSTFCGTPNYIAPEILRG------EEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVI 215 (327)
T ss_pred CCCC------ceecccCCcccCCHHHHCC------CCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHH
Confidence 2111 0112344568999999876 356789999999999999999999884210 0
Q ss_pred -----hccCCCCcchHHHHHHHhccCCCCCCCh------HHHhhCCCCCcch
Q 004157 247 -----RNTASIPKSLLPDYQRLLSSMPSRRLNS------SKLIENSEYFQNK 287 (771)
Q Consensus 247 -----~~~~~IP~~l~~~i~~lL~~~P~~Rps~------~~lL~~~~fF~n~ 287 (771)
.....++..+.+++.+||+.+|.+|+++ .++++| +||+..
T Consensus 216 ~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h-~~f~~~ 266 (327)
T cd05617 216 LEKPIRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSH-TFFRSI 266 (327)
T ss_pred HhCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcC-CCCCCC
Confidence 0112355678899999999999999984 588877 777653
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-30 Score=278.43 Aligned_cols=238 Identities=16% Similarity=0.221 Sum_probs=191.1
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
+..+|++.+.+|.|. | .||+|+++.++..|+||.+...... ..+.+.+|+.+++.++||||+++++.+...
T Consensus 18 ~~~~y~~~~~lg~g~~~--~v~~~~~~~~~~~v~ik~~~~~~~~--~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~---- 89 (296)
T cd06654 18 PKKKYTRFEKIGQGASG--TVYTAMDVATGQEVAIRQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLVG---- 89 (296)
T ss_pred cccceeeEEEecCCCCe--EEEEEEECCCCcEEEEEEEecCCcc--hHHHHHHHHHHHHhCCCCCEeeEEEEEEeC----
Confidence 457899999999998 8 8999999999999999999865433 245688999999999999999999998863
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
.+.|+||||+ ++|.+++.+... ....+..++.|++.||.|||+ .+++||||||+||+++.+|.+||+||
T Consensus 90 ----~~~~lv~e~~~~~~L~~~~~~~~~----~~~~~~~i~~ql~~aL~~LH~-~gi~H~dLkp~Nill~~~~~~kl~df 160 (296)
T cd06654 90 ----DELWVVMEYLAGGSLTDVVTETCM----DEGQIAAVCRECLQALEFLHS-NQVIHRDIKSDNILLGMDGSVKLTDF 160 (296)
T ss_pred ----CEEEEeecccCCCCHHHHHHhcCC----CHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEEcCCCCEEECcc
Confidence 4899999999 479888875432 233355669999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------- 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l------- 246 (771)
|++......... .........|+|||.+.+ ..++.++|+|||||++|+|++|..||.....
T Consensus 161 g~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~ 228 (296)
T cd06654 161 GFCAQITPEQSK------RSTMVGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI 228 (296)
T ss_pred ccchhccccccc------cCcccCCccccCHHHHcC------CCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHH
Confidence 998765432110 011123458999999865 3456799999999999999999988754321
Q ss_pred --------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCC
Q 004157 247 --------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEY 283 (771)
Q Consensus 247 --------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~f 283 (771)
.....++..+.+++.+||..+|..||++.++++|.++
T Consensus 229 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~ 273 (296)
T cd06654 229 ATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFL 273 (296)
T ss_pred hcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhh
Confidence 0113456678899999999999999999999998433
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=279.18 Aligned_cols=241 Identities=15% Similarity=0.131 Sum_probs=182.4
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECC----------------CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCC
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKD----------------DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHP 79 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~----------------~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHP 79 (771)
+..+|.+.++||.|+ | .||+|.++. ++..|+||++.... .......+.+|+++|++++||
T Consensus 3 ~~~~~~~~~~lg~G~fg--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~ 79 (304)
T cd05096 3 PRGHLLFKEKLGEGQFG--EVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA-NKNARNDFLKEVKILSRLKDP 79 (304)
T ss_pred chhhCeeeeEecccCCe--EEEEEEeccCcccccccccccccCCcceEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCC
Confidence 456799999999998 8 999997542 34479999987543 233456788999999999999
Q ss_pred CeeEEeeeEEecccCcCCcccEEEEEecCC--cchHHHHHHhCCCCC----------------CcHHHHHHHHHHHHHHH
Q 004157 80 NILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGS----------------QRDEYYAWGLNQIAKAV 141 (771)
Q Consensus 80 nIlkv~d~~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~----------------~~~~~i~~gl~QI~~aL 141 (771)
||+++++++..+ ...|+||||+ ++|.+++........ .....+..++.||+.||
T Consensus 80 niv~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al 151 (304)
T cd05096 80 NIIRLLGVCVDE--------DPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGM 151 (304)
T ss_pred CeeEEEEEEecC--------CceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 999999999864 3789999999 579998876432111 12233556799999999
Q ss_pred HHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCc
Q 004157 142 SFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWS 221 (771)
Q Consensus 142 ~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~ 221 (771)
.|||+ .+++||||||+||+++.+|.+||+|||+++........ ........+..|+|||++.+ ..++.+
T Consensus 152 ~~lH~-~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~------~~~~~~ 220 (304)
T cd05096 152 KYLSS-LNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYY----RIQGRAVLPIRWMAWECILM------GKFTTA 220 (304)
T ss_pred HHHHH-CCccccCcchhheEEcCCccEEECCCccceecccCcee----EecCcCCCCccccCHHHHhc------CCCCch
Confidence 99996 89999999999999999999999999999765432110 00011122447999999865 356779
Q ss_pred chHHHHHHHHHHHhhC--CCCCChh---hh--------h---------ccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 222 IDSWGLGCLIYELFSG--MRLSKTE---EL--------R---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 222 ~Di~SLG~li~el~~g--~~p~~~~---~l--------~---------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
+|+|||||++|||+++ ..|+... +. . ....+|..+.+++.+|++.+|.+||++.++.+
T Consensus 221 ~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~ 300 (304)
T cd05096 221 SDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHA 300 (304)
T ss_pred hhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence 9999999999999864 3444321 10 0 11245778999999999999999999999854
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.6e-31 Score=289.85 Aligned_cols=239 Identities=20% Similarity=0.254 Sum_probs=203.0
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
..|.+.+.||.|. + +|..|++..++..||||++++...+...+..+.+|+++++.|.||||++++.+++.+
T Consensus 56 g~y~i~~tig~g~f~--~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~------ 127 (596)
T KOG0586|consen 56 GLYVIIKTIGKGNFA--KVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETE------ 127 (596)
T ss_pred cceeeeeeeccceeE--EEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeec------
Confidence 3589999999998 8 999999999999999999999877776666688999999999999999999999985
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+|+||||+ +.+.++|.+.+...+... .-.+.|++.|++|||. .+|||||||.+||+++.+-++||+|||+
T Consensus 128 --~~lylV~eya~~ge~~~yl~~~gr~~e~~a---r~~F~q~vsaveYcH~-k~ivHrdLk~eNilL~~~mnikIaDfgf 201 (596)
T KOG0586|consen 128 --ATLYLVMEYASGGELFDYLVKHGRMKEKEA---RAKFRQIVSAVEYCHS-KNIVHRDLKAENILLDENMNIKIADFGF 201 (596)
T ss_pred --ceeEEEEEeccCchhHHHHHhcccchhhhh---hhhhHHHHHHHHHHhh-cceeccccchhhcccccccceeeecccc
Confidence 4899999999 679999998875444322 3338999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhcc------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT------ 249 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~~------ 249 (771)
+..+.... + -..+++...|.|||+..+. +..+..+|+|+||+++|.|+.|.-||+...++.+
T Consensus 202 S~~~~~~~------~-lqt~cgsppyAaPEl~~g~-----~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~ 269 (596)
T KOG0586|consen 202 STFFDYGL------M-LQTFCGSPPYAAPELFNGK-----KYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLR 269 (596)
T ss_pred ceeecccc------c-ccccCCCCCccChHhhcCc-----ccCCcceehhhhhhhheeeeecccccCCcccccccchhee
Confidence 98886421 1 2245667799999999874 4567899999999999999999999987766543
Q ss_pred --CCC----CcchHHHHHHHhccCCCCCCChHHHhhCCCC
Q 004157 250 --ASI----PKSLLPDYQRLLSSMPSRRLNSSKLIENSEY 283 (771)
Q Consensus 250 --~~I----P~~l~~~i~~lL~~~P~~Rps~~~lL~~~~f 283 (771)
..| ..+..++++++|-.+|.+|++.++++.|.|.
T Consensus 270 gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~ 309 (596)
T KOG0586|consen 270 GKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWR 309 (596)
T ss_pred eeecccceeechhHHHHHHhhccCccccCCHHHhhhhccc
Confidence 234 4567788899999999999999999998543
|
|
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-30 Score=274.13 Aligned_cols=236 Identities=15% Similarity=0.223 Sum_probs=192.0
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.|++.+.+|.|+ | .||.|.++.+++.|+||++.+..... .....+.+|++++++++||||+++++.++..
T Consensus 1 ~y~~~~~i~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------ 72 (258)
T cd05578 1 HFELLRVIGKGAFG--KVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDE------ 72 (258)
T ss_pred CceEEEEeccCCCc--eEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCC------
Confidence 489999999998 8 99999999999999999998654332 4567889999999999999999999998753
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+|+|+||+ ++|.+++..... .....+..++.||++||.|||+ .+++|+||+|+||+++.+|.++|+|||+
T Consensus 73 --~~~~lv~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~~~nil~~~~~~~~l~d~~~ 146 (258)
T cd05578 73 --ENMYLVVDLLLGGDLRYHLSQKVK---FSEEQVKFWICEIVLALEYLHS-KGIIHRDIKPDNILLDEQGHVHITDFNI 146 (258)
T ss_pred --CeEEEEEeCCCCCCHHHHHHhcCC---cCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHeEEcCCCCEEEeeccc
Confidence 4899999999 579999877622 2244466679999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh---------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--------- 246 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l--------- 246 (771)
+........ .........|+|||+..+ ..++.++|+|||||++|++++|..|+.....
T Consensus 147 ~~~~~~~~~-------~~~~~~~~~y~~PE~~~~------~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~ 213 (258)
T cd05578 147 ATKVTPDTL-------TTSTSGTPGYMAPEVLCR------QGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAK 213 (258)
T ss_pred ccccCCCcc-------ccccCCChhhcCHHHHcc------cCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHH
Confidence 876643211 111223447999999876 3467899999999999999999988754321
Q ss_pred ------hccCCCCcchHHHHHHHhccCCCCCCCh--HHHhhCCC
Q 004157 247 ------RNTASIPKSLLPDYQRLLSSMPSRRLNS--SKLIENSE 282 (771)
Q Consensus 247 ------~~~~~IP~~l~~~i~~lL~~~P~~Rps~--~~lL~~~~ 282 (771)
.....+|..+.+++.+||..+|.+|++. .++++|++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~ 257 (258)
T cd05578 214 QETADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPY 257 (258)
T ss_pred hccccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCC
Confidence 1113467889999999999999999999 99998843
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-30 Score=272.49 Aligned_cols=240 Identities=15% Similarity=0.195 Sum_probs=189.8
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
...+|++.+.||.|. | .||.|++..+++.|+||++..... .....+++|+.+++.++||||+++++.+...
T Consensus 7 ~~~~~~~~~~lg~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~---- 78 (267)
T cd06645 7 PQEDFELIQRIGSGTYG--DVYKARNVNTGELAAIKVIKLEPG--EDFAVVQQEIIMMKDCKHSNIVAYFGSYLRR---- 78 (267)
T ss_pred cHHHHHHHHHhCCCCCe--EEEEEEEcCCCcEEEEEEEecCch--hHHHHHHHHHHHHHhCCCCCeeeEEEEEEeC----
Confidence 456899999999998 7 899999999999999999976432 2345678899999999999999999998763
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+|+||||+ ++|.+++..... .....+.+++.||+.||.|||+ .+++|+||||+||+++.+|.+||+||
T Consensus 79 ----~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~nili~~~~~~~l~df 150 (267)
T cd06645 79 ----DKLWICMEFCGGGSLQDIYHVTGP---LSESQIAYVSRETLQGLYYLHS-KGKMHRDIKGANILLTDNGHVKLADF 150 (267)
T ss_pred ----CEEEEEEeccCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECCCCCEEECcc
Confidence 4899999999 479998876543 2345567779999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----h---
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----L--- 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----l--- 246 (771)
|++......... .....+...|+|||++... ....++.++|+|||||++|+|++|..|+.... .
T Consensus 151 g~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~---~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~ 221 (267)
T cd06645 151 GVSAQITATIAK------RKSFIGTPYWMAPEVAAVE---RKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLM 221 (267)
T ss_pred eeeeEccCcccc------cccccCcccccChhhhccc---cCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhh
Confidence 998765432110 1112334589999987421 01346678999999999999999987763211 0
Q ss_pred ----------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 247 ----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 247 ----------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
.....++..+.+++.+||..+|.+||++.++++|+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~ 266 (267)
T cd06645 222 TKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHP 266 (267)
T ss_pred hccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCC
Confidence 01123566788999999999999999999999884
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-30 Score=275.10 Aligned_cols=239 Identities=15% Similarity=0.206 Sum_probs=184.6
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
-.|++.+.||.|. | .||.|.++.+|+.|+||++..+... .....+.+|+..++.++||||++++++++.+
T Consensus 5 ~~y~~~~~ig~g~~~--~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~------ 75 (291)
T cd07870 5 TSYLNLEKLGEGSYA--TVYKGISRINGQLVALKVISMKTEE-GVPFTAIREASLLKGLKHANIVLLHDIIHTK------ 75 (291)
T ss_pred ceeEEEEEEEecCCE--EEEEEEEcCCCcEEEEEEecccCcC-CCcHHHHHHHHHHHhcCCCCEeEEEEEEecC------
Confidence 4699999999998 8 9999999999999999999754322 2233567899999999999999999998763
Q ss_pred cccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
...|+||||+ ++|...+..... ......+..++.||+.||.|||+ .+++|+||||+||+++.+|.+||+|||++
T Consensus 76 --~~~~lv~e~~~~~l~~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~-~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~ 150 (291)
T cd07870 76 --ETLTFVFEYMHTDLAQYMIQHPG--GLHPYNVRLFMFQLLRGLAYIHG-QHILHRDLKPQNLLISYLGELKLADFGLA 150 (291)
T ss_pred --CeEEEEEecccCCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCChHHEEEcCCCcEEEeccccc
Confidence 4889999999 567666654321 12234456678999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-----h----
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-----R---- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-----~---- 247 (771)
+........ ......+..|+|||++.+. ..++.++|+|||||++|+|++|..+|..... .
T Consensus 151 ~~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~ 219 (291)
T cd07870 151 RAKSIPSQT------YSSEVVTLWYRPPDVLLGA-----TDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWT 219 (291)
T ss_pred cccCCCCCC------CCCccccccccCCceeecC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHH
Confidence 764332111 1112234589999998642 2355689999999999999999988742110 0
Q ss_pred --------------cc----------------------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 248 --------------NT----------------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 248 --------------~~----------------------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
.. ...+..+.+++.+|+..+|.+|||+.+++.|++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~ 290 (291)
T cd07870 220 VLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPY 290 (291)
T ss_pred HcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCC
Confidence 00 011346778999999999999999999999943
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-30 Score=277.81 Aligned_cols=232 Identities=15% Similarity=0.060 Sum_probs=178.6
Q ss_pred CCCCCCCceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEEE
Q 004157 26 PYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104 (771)
Q Consensus 26 ~ig~G~g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iyI 104 (771)
.++.|+ ...||+|.. +|+.|+||.+....... ...+.+.+|+.+|++++||||+++++++.....+ ...+|+
T Consensus 27 ~i~~g~-~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~----~~~~~l 99 (283)
T PHA02988 27 LIKEND-QNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDD----LPRLSL 99 (283)
T ss_pred EEeeCC-ceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccC----CCceEE
Confidence 345554 339999987 68999999997653332 3457788999999999999999999998751111 347899
Q ss_pred EecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCCC
Q 004157 105 VTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGN 182 (771)
Q Consensus 105 VtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~ 182 (771)
||||+ ++|.+++....... ......++.|++.||.|||+..+++||||||+||+++.+|.+||+|||++......
T Consensus 100 v~Ey~~~g~L~~~l~~~~~~~---~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~ 176 (283)
T PHA02988 100 ILEYCTRGYLREVLDKEKDLS---FKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSP 176 (283)
T ss_pred EEEeCCCCcHHHHHhhCCCCC---hhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhccc
Confidence 99999 46999997654322 22233458999999999997568999999999999999999999999998765432
Q ss_pred CCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc-------------c
Q 004157 183 NEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN-------------T 249 (771)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~-------------~ 249 (771)
. ........|+|||++.+.. ..++.++|+|||||++|||++|..||....... .
T Consensus 177 ~---------~~~~~~~~y~aPE~~~~~~----~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~ 243 (283)
T PHA02988 177 P---------FKNVNFMVYFSYKMLNDIF----SEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKL 243 (283)
T ss_pred c---------ccccCcccccCHHHhhhcc----ccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCC
Confidence 1 1123345899999986521 356789999999999999999998886432110 1
Q ss_pred -CCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 250 -ASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 250 -~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
..+|..+.+++.+||+.+|..||++.++++.
T Consensus 244 ~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 275 (283)
T PHA02988 244 PLDCPLEIKCIVEACTSHDSIKRPNIKEILYN 275 (283)
T ss_pred CCcCcHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence 1467789999999999999999999998864
|
|
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.1e-30 Score=269.42 Aligned_cols=241 Identities=18% Similarity=0.225 Sum_probs=189.8
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
++..|++.+.+|.|. | .||.|.++.+++.|+||++...... ....+.+|++++++++||||+++++.+...
T Consensus 1 ~~~~~~~~~~l~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~---- 72 (262)
T cd06613 1 PQEDYELIQRIGSGTYG--DVYKARDIATGELVAIKVIKLEPGD--DFEIIQQEISMLKECRHPNIVAYFGSYLRR---- 72 (262)
T ss_pred CccceEEEEEecCCCce--EEEEeEecCCCCEEEEEEEEcCchh--hHHHHHHHHHHHHhCCCCChhceEEEEEeC----
Confidence 356799999999987 6 9999999999999999999865332 457788999999999999999999998763
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+|++|||+ +.|.+++..... ......+..++.|++.||.|||+ .+++||||+|+||+++.+|.+||+||
T Consensus 73 ----~~~~l~~e~~~~~~l~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lh~-~~i~h~dl~p~ni~i~~~~~~~l~d~ 145 (262)
T cd06613 73 ----DKLWIVMEYCGGGSLQDIYQVTRG--PLSELQIAYVCRETLKGLAYLHE-TGKIHRDIKGANILLTEDGDVKLADF 145 (262)
T ss_pred ----CEEEEEEeCCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHh-CCceecCCChhhEEECCCCCEEECcc
Confidence 4899999999 468888876421 12244466779999999999996 99999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----h---
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----L--- 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----l--- 246 (771)
|++......... .........|++||...+... ..++.++|+|||||++|+|++|.+|+.... .
T Consensus 146 g~~~~~~~~~~~------~~~~~~~~~y~~Pe~~~~~~~---~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~ 216 (262)
T cd06613 146 GVSAQLTATIAK------RKSFIGTPYWMAPEVAAVERK---GGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLI 216 (262)
T ss_pred ccchhhhhhhhc------cccccCCccccCchhhccccc---CCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 998765432110 011123347999999765210 245678999999999999999998874321 0
Q ss_pred ----------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 247 ----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 247 ----------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
.....++..+.+++.+|+..+|..||++.+++.|.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~ 261 (262)
T cd06613 217 SKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHP 261 (262)
T ss_pred HhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCC
Confidence 01123456788999999999999999999999884
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-31 Score=288.35 Aligned_cols=234 Identities=18% Similarity=0.240 Sum_probs=179.1
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcC---CCCCeeEEeeeEEecccCcCCcccE
Q 004157 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTV---RHPNILAFLHSTEVENIDATSTKIT 101 (771)
Q Consensus 27 ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~L---rHPnIlkv~d~~e~e~~d~~~~~~~ 101 (771)
||.|+ | +||+|+++.+|+.|+||++.+... .........+|..++..+ +||||+++++.++.. ..
T Consensus 1 lG~G~~g--~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~--------~~ 70 (330)
T cd05586 1 IGKGTFG--QVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTD--------SD 70 (330)
T ss_pred CCCCCce--EEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecC--------Ce
Confidence 56777 8 999999999999999999975321 112233344566666655 699999999999874 48
Q ss_pred EEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccccc
Q 004157 102 IYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (771)
Q Consensus 102 iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~ 179 (771)
+|+||||+ ++|.+++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++...
T Consensus 71 ~~lv~e~~~~g~L~~~l~~~~~~---~~~~~~~~~~qil~al~~LH~-~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~ 146 (330)
T cd05586 71 LYLVTDYMSGGELFWHLQKEGRF---SEDRAKFYIAELVLALEHLHK-YDIVYRDLKPENILLDATGHIALCDFGLSKAN 146 (330)
T ss_pred EEEEEcCCCCChHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeEeccCCHHHeEECCCCCEEEecCCcCcCC
Confidence 99999999 4788888765432 344466679999999999996 89999999999999999999999999998754
Q ss_pred CCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc----c------
Q 004157 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN----T------ 249 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~----~------ 249 (771)
...... .....++..|+|||++.+. ..++.++|+|||||++|+|++|..||....... +
T Consensus 147 ~~~~~~------~~~~~gt~~y~aPE~~~~~-----~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~ 215 (330)
T cd05586 147 LTDNKT------TNTFCGTTEYLAPEVLLDE-----KGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVR 215 (330)
T ss_pred CCCCCC------ccCccCCccccCHHHHcCC-----CCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCC
Confidence 321110 1122345589999998653 346788999999999999999998875432211 1
Q ss_pred ---CCCCcchHHHHHHHhccCCCCCC----ChHHHhhCCCCCcc
Q 004157 250 ---ASIPKSLLPDYQRLLSSMPSRRL----NSSKLIENSEYFQN 286 (771)
Q Consensus 250 ---~~IP~~l~~~i~~lL~~~P~~Rp----s~~~lL~~~~fF~n 286 (771)
..++..+.+++++||+.+|.+|+ ++.++++| +||.+
T Consensus 216 ~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h-~~~~~ 258 (330)
T cd05586 216 FPKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEH-PFFAD 258 (330)
T ss_pred CCCccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcC-ccccC
Confidence 23567788999999999999998 68899988 56654
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-30 Score=274.16 Aligned_cols=239 Identities=18% Similarity=0.237 Sum_probs=186.0
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCC-----CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDG-----SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g-----~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
.|++.+.||.|+ | .||.|.....+ ..|++|.+.... .......+.+|++.+++++||||+++++++...
T Consensus 6 ~~~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~~~v~~K~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~-- 80 (283)
T cd05048 6 AVRFLEELGEGAFG--KVYKGELTGPNERLSATSVAIKTLKENA-EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKE-- 80 (283)
T ss_pred HcchhhcccCccCC--cEEEEEEecCCCCcceeeEEEEecccCC-CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCC--
Confidence 589999999998 8 99999976555 679999987543 234456788999999999999999999998753
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCC-------------CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCC
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLE-------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLS 158 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~-------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~ 158 (771)
...|++|||+ ++|.+++...... .......+..++.||+.||.|||+ .+++||||||+
T Consensus 81 ------~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~-~~i~H~dlkp~ 153 (283)
T cd05048 81 ------QPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSS-HHFVHRDLAAR 153 (283)
T ss_pred ------CceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccccccc
Confidence 3789999999 5799999765321 112334466779999999999996 89999999999
Q ss_pred CEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-C
Q 004157 159 SVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-G 237 (771)
Q Consensus 159 NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g 237 (771)
||+++.++.+||+|||++......... ........+..|+|||++.+ ..++.++|+|||||++|||++ |
T Consensus 154 Nil~~~~~~~~L~dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~------~~~~~~sDv~slG~il~el~~~g 223 (283)
T cd05048 154 NCLVGEGLTVKISDFGLSRDIYSADYY----RVQSKSLLPVRWMPPEAILY------GKFTTESDIWSFGVVLWEIFSYG 223 (283)
T ss_pred eEEEcCCCcEEECCCcceeeccccccc----cccCCCcccccccCHHHhcc------CcCchhhhHHHHHHHHHHHHcCC
Confidence 999999999999999998765432110 00111233457999998765 356678999999999999997 8
Q ss_pred CCCCChh---hh----h------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 238 MRLSKTE---EL----R------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 238 ~~p~~~~---~l----~------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
..||... ++ . ....+|..+.+++.+|++.+|.+||++.+++++
T Consensus 224 ~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 224 LQPYYGFSNQEVIEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred CCCCCCCCHHHHHHHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 7776431 11 0 113467889999999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.6e-30 Score=272.47 Aligned_cols=231 Identities=16% Similarity=0.139 Sum_probs=184.2
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|++.+.+|.|. | .||+|++..+++.|+||++..... ......+.+|++++++++||||+++++.++.+
T Consensus 2 ~~~~~~~lg~g~~~--~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------- 71 (279)
T cd06619 2 DIQYQEILGHGNGG--TVYKAYHLLTRRILAVKVIPLDIT-VELQKQIMSELEILYKCDSPYIIGFYGAFFVE------- 71 (279)
T ss_pred cchheeeeccCCCe--EEEEEEEcCCCcEEEEEEEecCCC-hHHHHHHHHHHHHHHhCCCCCeeeEEEEEEEC-------
Confidence 478889999998 8 999999999999999999976432 23455688999999999999999999999874
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
...|+||||+ +.|..+. . .....+..++.||+.||.|||+ .+++|+||||+||+++.+|.+||+|||++
T Consensus 72 -~~~~lv~e~~~~~~l~~~~-~------~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~Nill~~~~~~~l~dfg~~ 142 (279)
T cd06619 72 -NRISICTEFMDGGSLDVYR-K------IPEHVLGRIAVAVVKGLTYLWS-LKILHRDVKPSNMLVNTRGQVKLCDFGVS 142 (279)
T ss_pred -CEEEEEEecCCCCChHHhh-c------CCHHHHHHHHHHHHHHHHHHHH-CCEeeCCCCHHHEEECCCCCEEEeeCCcc
Confidence 3789999999 3454331 1 1234466779999999999996 99999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-----------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----------- 245 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----------- 245 (771)
....... ......+..|+|||++.+ ..++.++|+|||||++|+|++|..||....
T Consensus 143 ~~~~~~~--------~~~~~~~~~y~aPE~~~~------~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~ 208 (279)
T cd06619 143 TQLVNSI--------AKTYVGTNAYMAPERISG------EQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQL 208 (279)
T ss_pred eeccccc--------ccCCCCChhhcCceeecC------CCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHH
Confidence 7654321 111234458999999875 356789999999999999999998874311
Q ss_pred hh--------c--cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCC
Q 004157 246 LR--------N--TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEY 283 (771)
Q Consensus 246 l~--------~--~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~f 283 (771)
.. . ...++..+.+++.+||..+|.+||++.++++|.++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~ 256 (279)
T cd06619 209 LQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFI 256 (279)
T ss_pred HHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCccc
Confidence 00 0 12356678899999999999999999999998443
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.4e-30 Score=269.74 Aligned_cols=242 Identities=17% Similarity=0.234 Sum_probs=187.7
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc----hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ----DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~----~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
.|++++.||.|+ | +||+|.. .+|+.|+||.+..+... ......+++|+..|++++||||+++++++...
T Consensus 1 ~~~~~~~ig~g~~~--~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--- 74 (265)
T cd06631 1 EWTKGEVLGKGAYG--TVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDD--- 74 (265)
T ss_pred CccccceEeccCCe--EEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecC---
Confidence 488999999997 7 9999986 47899999998754322 23456788999999999999999999999863
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
..+|+|+||+ ++|.+++.+... .....+..++.||+.||.|||+ .+++|+||+|+||+++.+|.+||+|
T Consensus 75 -----~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~p~nil~~~~~~~~l~d 145 (265)
T cd06631 75 -----NTISIFMEFVPGGSISSILNRFGP---LPEPVFCKYTKQILDGVAYLHN-NCVVHRDIKGNNVMLMPNGIIKLID 145 (265)
T ss_pred -----CeEEEEEecCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCcccCCcCHHhEEECCCCeEEecc
Confidence 4899999999 479999876532 2344466679999999999996 8999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----h--
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----L-- 246 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----l-- 246 (771)
||++........................|+|||+..+ ..++.++|+|||||++|++++|..||.... .
T Consensus 146 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~------~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~ 219 (265)
T cd06631 146 FGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINE------SGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFY 219 (265)
T ss_pred chhhHhhhhccccccccccccccCCCccccChhhhcC------CCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHH
Confidence 9998765321111000000112234457999999875 345678999999999999999998875321 0
Q ss_pred ---------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 247 ---------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 247 ---------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
.....++..+.+++++||..+|.+||++.++++|++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~ 264 (265)
T cd06631 220 IGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDF 264 (265)
T ss_pred hhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCC
Confidence 011234567889999999999999999999999843
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-30 Score=308.20 Aligned_cols=245 Identities=19% Similarity=0.195 Sum_probs=192.9
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
.-.+|++.+.||.|+ | +||+|+++.++..|++|++............+.+|+.+|+.|+||||++++++|....
T Consensus 11 ~l~~YeIl~kLG~GgFG--tVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~--- 85 (1021)
T PTZ00266 11 RLNEYEVIKKIGNGRFG--EVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKA--- 85 (1021)
T ss_pred ccCCEEEEEEEecCCCe--EEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecC---
Confidence 345799999999998 8 9999999999999999999876555555677889999999999999999999987644
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhC-CCCCCcHHHHHHHHHHHHHHHHHHHcC------CCceecCCCCCCEEEcC--
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELG-LEGSQRDEYYAWGLNQIAKAVSFLNND------CKLVHGNVCLSSVVVTQ-- 164 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~-~~~~~~~~~i~~gl~QI~~aL~fLH~~------~~ivH~dIkp~NI~v~~-- 164 (771)
...+||||||| ++|.++|.... .........++.++.||+.||.|||+. .+||||||||+||||+.
T Consensus 86 ---~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~ 162 (1021)
T PTZ00266 86 ---NQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGI 162 (1021)
T ss_pred ---CCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCc
Confidence 34899999999 57999887632 122234455777799999999999962 24999999999999964
Q ss_pred ---------------CCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHH
Q 004157 165 ---------------TLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGC 229 (771)
Q Consensus 165 ---------------~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~ 229 (771)
.+.+||+|||++........ .....++..|+|||++.+.. ..++.++|||||||
T Consensus 163 ~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~-------~~s~vGTp~YmAPEvL~ge~----~~~s~KSDVWSLG~ 231 (1021)
T PTZ00266 163 RHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESM-------AHSCVGTPYYWSPELLLHET----KSYDDKSDMWALGC 231 (1021)
T ss_pred cccccccccccccCCCCceEEccCCcccccccccc-------ccccCCCccccCHHHHhccC----CCCCchhHHHHHHH
Confidence 34489999999976543211 11223456899999985421 24567899999999
Q ss_pred HHHHHhhCCCCCChhh----h----hc-----cCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 230 LIYELFSGMRLSKTEE----L----RN-----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 230 li~el~~g~~p~~~~~----l----~~-----~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
++|+|++|..||.... + .. ...++..+.+++.+||..+|..||++.++|.+
T Consensus 232 ILYELLTGk~PF~~~~~~~qli~~lk~~p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h 295 (1021)
T PTZ00266 232 IIYELCSGKTPFHKANNFSQLISELKRGPDLPIKGKSKELNILIKNLLNLSAKERPSALQCLGY 295 (1021)
T ss_pred HHHHHHHCCCCCCcCCcHHHHHHHHhcCCCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhcc
Confidence 9999999999885321 1 11 12346779999999999999999999999987
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=285.61 Aligned_cols=231 Identities=16% Similarity=0.178 Sum_probs=182.5
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~ 99 (771)
+++.++||.|. | .||.|..+ ....|+||.+...... .+.+.+|+++|++|+|+|||+++.+++.+.
T Consensus 208 l~l~~~LG~G~FG--~V~~g~~~-~~~~vavk~ik~~~m~---~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~------- 274 (468)
T KOG0197|consen 208 LKLIRELGSGQFG--EVWLGKWN-GSTKVAVKTIKEGSMS---PEAFLREAQIMKKLRHEKLVKLYGVCTKQE------- 274 (468)
T ss_pred HHHHHHhcCCccc--eEEEEEEc-CCCcccceEEeccccC---hhHHHHHHHHHHhCcccCeEEEEEEEecCC-------
Confidence 45667899999 9 99999997 3459999999865433 245668999999999999999999998642
Q ss_pred cEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 100 ITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 100 ~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
-+||||||+ ++|.++|+...... .....+.....||++|++||++ .++|||||-..||+|++++.+|++|||+++
T Consensus 275 -piyIVtE~m~~GsLl~yLr~~~~~~-l~~~~Ll~~a~qIaeGM~YLes-~~~IHRDLAARNiLV~~~~~vKIsDFGLAr 351 (468)
T KOG0197|consen 275 -PIYIVTEYMPKGSLLDYLRTREGGL-LNLPQLLDFAAQIAEGMAYLES-KNYIHRDLAARNILVDEDLVVKISDFGLAR 351 (468)
T ss_pred -ceEEEEEecccCcHHHHhhhcCCCc-cchHHHHHHHHHHHHHHHHHHh-CCccchhhhhhheeeccCceEEEccccccc
Confidence 699999999 78999999832211 1222344559999999999996 899999999999999999999999999999
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhC-CCCCChhh-----------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG-MRLSKTEE----------- 245 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g-~~p~~~~~----------- 245 (771)
...++... ...+...|..|.|||.+..+ .++.++|+||||+||||||+- +.|+....
T Consensus 352 ~~~d~~Y~-----~~~~~kfPIkWtAPEa~~~~------~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~G 420 (468)
T KOG0197|consen 352 LIGDDEYT-----ASEGGKFPIKWTAPEALNYG------KFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERG 420 (468)
T ss_pred ccCCCcee-----ecCCCCCCceecCHHHHhhC------CcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhcc
Confidence 55442110 12223345589999999873 678899999999999999994 45543221
Q ss_pred --hhccCCCCcchHHHHHHHhccCCCCCCChHHHh
Q 004157 246 --LRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLI 278 (771)
Q Consensus 246 --l~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL 278 (771)
+......|..+.++++.|+..+|+.|||++.+.
T Consensus 421 yRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 421 YRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred CcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence 223367899999999999999999999998654
|
|
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.6e-31 Score=261.28 Aligned_cols=255 Identities=16% Similarity=0.191 Sum_probs=203.1
Q ss_pred CCCCCceecCCCCCCCCceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 16 VKDLPYNIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
+.+.+|.|.+.+|.|+.. -||.++...++..||+|++-..+ .+..+.+++|+...|+++||||+++++....+..|+
T Consensus 18 In~~Ryri~~~LgeGGfs-fv~LV~~~s~~~~YAlKkI~c~~--~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~ 94 (302)
T KOG2345|consen 18 INNKRYRIQRLLGEGGFS-FVDLVKGLSTGHLYALKKILCHS--QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDG 94 (302)
T ss_pred EcCceEEEeeeecCCCce-eeeeecccCcccchhhheeeccc--hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccC
Confidence 456789999999999722 79999999999999999998765 335678899999999999999999999986655543
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCC-CCcHHHHHHHHHHHHHHHHHHHcCCC--ceecCCCCCCEEEcCCCcEEE
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEG-SQRDEYYAWGLNQIAKAVSFLNNDCK--LVHGNVCLSSVVVTQTLDWKL 170 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~-~~~~~~i~~gl~QI~~aL~fLH~~~~--ivH~dIkp~NI~v~~~G~~KL 170 (771)
+...||++.|. ++|.+.|......+ ...+..+.|++.+|++||++||+ .. +.||||||.||++++.|..+|
T Consensus 95 ---~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~-~~~~yAH~DiKP~NILls~~~~~vl 170 (302)
T KOG2345|consen 95 ---KHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHE-KEPPYAHRDIKPANILLSDSGLPVL 170 (302)
T ss_pred ---ceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhc-cCCcccccCCCcceeEecCCCceEE
Confidence 66899999999 78999999877655 34455688899999999999996 76 999999999999999999999
Q ss_pred EccCcccccCCCCCCCCCCcccc---ccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh--
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQY---AWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-- 245 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~---~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-- 245 (771)
.|||-++...-.-.......... ...++..|+|||++.-. .....+.++|||||||++|+|+.|..||+...
T Consensus 171 ~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk---~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~ 247 (302)
T KOG2345|consen 171 MDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVK---SHCTITERTDIWSLGCTLYAMMFGESPFERIYQQ 247 (302)
T ss_pred EeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecc---cCcccccccchhhhhHHHHHHHHcCCcchHHhhc
Confidence 99999986643211111111111 22456689999998642 11345679999999999999999998885321
Q ss_pred --------------hhccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 246 --------------LRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 246 --------------l~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
..+...++..+.++++.||+.+|.+||++.+++.+
T Consensus 248 GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 248 GGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred CCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 11224577889999999999999999999999875
|
|
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.7e-30 Score=270.25 Aligned_cols=237 Identities=16% Similarity=0.239 Sum_probs=186.9
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
...|++.+.+|.|. | .||+|.++.+++.|++|++.... .....+.+|++.++.++||||+++++.+..+
T Consensus 5 ~~~~~~~~~ig~g~~~--~v~~~~~~~~~~~~~~K~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 74 (263)
T cd05052 5 RTDITMKHKLGGGQYG--EVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE----- 74 (263)
T ss_pred hHHeEEeeecCCcccc--eEEEEEEecCCceEEEEEecCCc---hHHHHHHHHHHHHHhCCCCChhheEEEEcCC-----
Confidence 34589999999998 8 89999999999999999987432 2345678899999999999999999998764
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+|+||||+ ++|.+++...... ......+.+++.|++.||.|||+ .+++||||||+||+++.++.+||+|||
T Consensus 75 ---~~~~lv~e~~~~~~L~~~~~~~~~~-~l~~~~~~~~~~ql~~~l~~lH~-~~i~H~dlkp~nil~~~~~~~kl~df~ 149 (263)
T cd05052 75 ---PPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEK-KNFIHRDLAARNCLVGENHLVKVADFG 149 (263)
T ss_pred ---CCcEEEEEeCCCCcHHHHHHhCCCC-CCCHHHHHHHHHHHHHHHHHHHh-CCEeecccCcceEEEcCCCcEEeCCCc
Confidence 3789999999 5799988764321 12344566779999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh-------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL------- 246 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l------- 246 (771)
++.......... ......+..|++||...+ ..++.++|+|||||++|||++ |..|+.....
T Consensus 150 ~~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~ 218 (263)
T cd05052 150 LSRLMTGDTYTA-----HAGAKFPIKWTAPESLAY------NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 218 (263)
T ss_pred cccccccceeec-----cCCCCCccccCCHHHhcc------CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 998765421100 001112346999998865 356678999999999999998 7777643211
Q ss_pred h------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 R------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 ~------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
. ....+|..+.+++.+||..+|++||++.++++.
T Consensus 219 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~ 258 (263)
T cd05052 219 EKGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQA 258 (263)
T ss_pred HCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHH
Confidence 1 123567789999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=298.82 Aligned_cols=256 Identities=16% Similarity=0.204 Sum_probs=185.1
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCC-cEEEEEEe--------------CC-CCchhHHHHHHHHHHHHhcCCCCCe
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGS-PVSIFSIS--------------GT-NAQDGHLAAARNGVKRLRTVRHPNI 81 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~-~VaIK~~~--------------~~-~~~~~~~~~~~~ei~~Lk~LrHPnI 81 (771)
.+|++.++||.|+ | +||.+..+.... .++++.+. +. .........+++|+++|++|+||||
T Consensus 148 ~~Y~ii~~LG~G~fG--~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 148 AHFRVIDDLPAGAFG--KIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hccEEEeEecCCCCc--ceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 3699999999998 8 999987654322 22222111 10 0112334567899999999999999
Q ss_pred eEEeeeEEecccCcCCcccEEEEEecCC-cchHHHHHHhCCCC--CCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCC
Q 004157 82 LAFLHSTEVENIDATSTKITIYIVTEPV-MPLSEKIKELGLEG--SQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLS 158 (771)
Q Consensus 82 lkv~d~~e~e~~d~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~--~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~ 158 (771)
++++++++.+ ...|+|+|++ ..|..++....... ......+..++.||+.||.|||+ .+||||||||+
T Consensus 226 v~l~~~~~~~--------~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~-~gIiHrDLKP~ 296 (501)
T PHA03210 226 LKIEEILRSE--------ANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHD-KKLIHRDIKLE 296 (501)
T ss_pred CcEeEEEEEC--------CeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHH
Confidence 9999999874 3789999999 57777776543211 11123345569999999999996 89999999999
Q ss_pred CEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCC
Q 004157 159 SVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM 238 (771)
Q Consensus 159 NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~ 238 (771)
|||++.+|.+||+|||++..+.... ....+.+.++..|+|||++.+ ..++.++|+|||||++|||++|.
T Consensus 297 NILl~~~~~vkL~DFGla~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlGvil~ell~~~ 365 (501)
T PHA03210 297 NIFLNCDGKIVLGDFGTAMPFEKER-----EAFDYGWVGTVATNSPEILAG------DGYCEITDIWSCGLILLDMLSHD 365 (501)
T ss_pred HEEECCCCCEEEEeCCCceecCccc-----ccccccccCCcCCCCchhhcC------CCCCcHHHHHHHHHHHHHHHHCC
Confidence 9999999999999999998765421 111233455678999999876 35778999999999999999976
Q ss_pred CC-CChh------hhh----------------------------------------ccCCCCcchHHHHHHHhccCCCCC
Q 004157 239 RL-SKTE------ELR----------------------------------------NTASIPKSLLPDYQRLLSSMPSRR 271 (771)
Q Consensus 239 ~p-~~~~------~l~----------------------------------------~~~~IP~~l~~~i~~lL~~~P~~R 271 (771)
.+ +... ++. ....+|..+.+++.+||+.||.+|
T Consensus 366 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~R 445 (501)
T PHA03210 366 FCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLR 445 (501)
T ss_pred CCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccC
Confidence 42 2110 000 001245556677889999999999
Q ss_pred CChHHHhhCCCCCcchhhhhhhhhhh
Q 004157 272 LNSSKLIENSEYFQNKLVDTIHFMEI 297 (771)
Q Consensus 272 ps~~~lL~~~~fF~n~lv~~~~~L~~ 297 (771)
|++.++|.| +||.....+.+.++..
T Consensus 446 psa~elL~h-p~f~~~~~~~~~~~~~ 470 (501)
T PHA03210 446 PGAAELLAL-PLFSAEEEEEILFIHG 470 (501)
T ss_pred cCHHHHhhC-hhhhcCCchHHHHHHh
Confidence 999999998 7776655555555544
|
|
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-30 Score=282.53 Aligned_cols=240 Identities=18% Similarity=0.233 Sum_probs=186.7
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccCcC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d~~ 96 (771)
.|++.+.||.|+ | +||+|.++.+|+.||||++.+... .+...+.+.+|.++++.+. ||+|++++++++.+
T Consensus 1 ~f~~~~~lg~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~----- 73 (323)
T cd05615 1 DFNFLMVLGKGSFG--KVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTV----- 73 (323)
T ss_pred CceEEEEEEecCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecC-----
Confidence 377888999998 8 999999999999999999985422 2233456778889998886 56788899888763
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+|+||||+ ++|..++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 74 ---~~~~lv~Ey~~~g~L~~~i~~~~~l---~~~~~~~i~~qi~~al~~lH~-~~ivHrDikp~Nill~~~~~ikL~Dfg 146 (323)
T cd05615 74 ---DRLYFVMEYVNGGDLMYHIQQVGKF---KEPQAVFYAAEISVGLFFLHR-RGIIYRDLKLDNVMLDSEGHIKIADFG 146 (323)
T ss_pred ---CEEEEEEcCCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHeEECCCCCEEEeccc
Confidence 3899999999 5798888765432 234456669999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------- 247 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------- 247 (771)
++........ ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 147 ~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~ 214 (323)
T cd05615 147 MCKEHMVDGV------TTRTFCGTPDYIAPEIIAY------QPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIM 214 (323)
T ss_pred cccccCCCCc------cccCccCCccccCHHHHcC------CCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9875432111 1112234558999999875 35678999999999999999999998643211
Q ss_pred -----ccCCCCcchHHHHHHHhccCCCCCCCh-----HHHhhCCCCCcc
Q 004157 248 -----NTASIPKSLLPDYQRLLSSMPSRRLNS-----SKLIENSEYFQN 286 (771)
Q Consensus 248 -----~~~~IP~~l~~~i~~lL~~~P~~Rps~-----~~lL~~~~fF~n 286 (771)
....++..+.+++.+||..+|.+|++. .++++| +||..
T Consensus 215 ~~~~~~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h-~~f~~ 262 (323)
T cd05615 215 EHNVSYPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREH-AFFRR 262 (323)
T ss_pred hCCCCCCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcC-cccCC
Confidence 113456778889999999999999974 567777 56654
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-30 Score=268.29 Aligned_cols=236 Identities=19% Similarity=0.260 Sum_probs=188.9
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.+|.|+ | .||.+.++.++..|++|.+..... ....+.+.+|+.+++.++||||+++++.++..
T Consensus 1 ~y~~~~~lg~g~~g--~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------- 70 (255)
T cd08219 1 QYNVLRVVGEGSFG--RALLVQHVNSDQKYAMKEIRLPKS-SSAVEDSRKEAVLLAKMKHPNIVAFKESFEAD------- 70 (255)
T ss_pred CceEEEEeeccCCe--EEEEEEEcCCCceEEEEEEEcCcc-hHHHHHHHHHHHHHHhCCCCCcceEEEEEEEC-------
Confidence 589999999998 7 999999999999999999975432 23456788999999999999999999999863
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+|+||||+ ++|.+++...... ......+..++.||+.||.|||+ .+++|+||+|+||+++.+|.++|+|||++
T Consensus 71 -~~~~lv~e~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~i~~al~~lH~-~~i~H~dl~p~nili~~~~~~~l~dfg~~ 147 (255)
T cd08219 71 -GHLYIVMEYCDGGDLMQKIKLQRGK-LFPEDTILQWFVQMCLGVQHIHE-KRVLHRDIKSKNIFLTQNGKVKLGDFGSA 147 (255)
T ss_pred -CEEEEEEeeCCCCcHHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCcceEEECCCCcEEEcccCcc
Confidence 4899999999 4688887653221 12344456668999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc--------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN-------- 248 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~-------- 248 (771)
........ ......+...|+|||++.+ ..++.++|+||||+++|+|++|..||.......
T Consensus 148 ~~~~~~~~------~~~~~~~~~~~~aPE~~~~------~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~ 215 (255)
T cd08219 148 RLLTSPGA------YACTYVGTPYYVPPEIWEN------MPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQG 215 (255)
T ss_pred eeeccccc------ccccccCCccccCHHHHcc------CCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcC
Confidence 76643211 0112234457999999865 356778999999999999999999886543211
Q ss_pred -----cCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 249 -----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 249 -----~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
...++..+.+++.+||+.+|.+||++.+++..
T Consensus 216 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 216 SYKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred CCCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 12355668889999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.3e-30 Score=270.04 Aligned_cols=249 Identities=16% Similarity=0.217 Sum_probs=190.8
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccCc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d~ 95 (771)
...|++.+.+|.|+ | +||+|..+.+++.|+||++...... ...+.+|+..++++ +||||+++++.+..+...
T Consensus 5 ~~~y~~~~~lg~g~~g--~vy~~~~~~~~~~~aik~~~~~~~~---~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~- 78 (272)
T cd06637 5 AGIFELVELVGNGTYG--QVYKGRHVKTGQLAAIKVMDVTGDE---EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP- 78 (272)
T ss_pred hhhhhHHHheeecCCe--EEEEEEEcCCCcEEEEEEEEcCCcc---HHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCC-
Confidence 45699999999998 8 9999999999999999999864322 34577899999998 699999999998764321
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
.....+|+||||+ ++|.+++..... .......+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+||
T Consensus 79 -~~~~~~~iv~e~~~~~~L~~~l~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~-~~ivh~dl~~~nili~~~~~~~l~Df 155 (272)
T cd06637 79 -GMDDQLWLVMEFCGAGSVTDLIKNTKG-NTLKEEWIAYICREILRGLSHLHQ-HKVIHRDIKGQNVLLTENAEVKLVDF 155 (272)
T ss_pred -CCCcEEEEEEEcCCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHH-CCCccCCCCHHHEEECCCCCEEEccC
Confidence 0124799999999 479888876431 122345566679999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------- 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l------- 246 (771)
|++......... .....+...|+|||++.+.-. ....++.++|+|||||++|+|++|..|+.....
T Consensus 156 g~~~~~~~~~~~------~~~~~g~~~y~aPE~~~~~~~-~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~ 228 (272)
T cd06637 156 GVSAQLDRTVGR------RNTFIGTPYWMAPEVIACDEN-PDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI 228 (272)
T ss_pred CCceeccccccc------CCcccccccccCHhHhccccC-cCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHH
Confidence 998765432110 111223447999999863210 012466789999999999999999988743210
Q ss_pred -------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 247 -------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 247 -------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
.....++..+.+++.+||..+|.+||++.+++.|+|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 271 (272)
T cd06637 229 PRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPF 271 (272)
T ss_pred hcCCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCC
Confidence 011346778999999999999999999999999854
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.5e-30 Score=269.73 Aligned_cols=238 Identities=18% Similarity=0.209 Sum_probs=186.8
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
+|++.+.+|.|. | .||+|+++.+++.|+||.+..... .......+.+|++++++++||||+++++.+...
T Consensus 3 ~~~i~~~l~~g~~~--~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------ 74 (267)
T cd08228 3 NFQIEKKIGRGQFS--EVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIED------ 74 (267)
T ss_pred ceeeeeeeccCCCe--eEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEEC------
Confidence 599999999998 8 899999999999999999875322 234456678899999999999999999998863
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCC-CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLE-GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~-~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+|+|+||+ ++|.+++...... .......+..++.||+.||.|||+ .+++||||+|+||+++.+|.++|+|||
T Consensus 75 --~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~dl~~~nil~~~~~~~~l~d~g 151 (267)
T cd08228 75 --NELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHS-RRVMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred --CeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhh-CCeeCCCCCHHHEEEcCCCCEEECccc
Confidence 3889999999 4788877653221 112344456669999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh--------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------- 246 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-------- 246 (771)
++......... .........|+|||.+.+ ..++.++|+|||||++|+|++|..|+.....
T Consensus 152 ~~~~~~~~~~~------~~~~~~~~~~~aPE~~~~------~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~ 219 (267)
T cd08228 152 LGRFFSSKTTA------AHSLVGTPYYMSPERIHE------NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQK 219 (267)
T ss_pred cceeccchhHH------HhcCCCCccccChhhhcc------CCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHH
Confidence 98766432110 111223457999998865 3566789999999999999999987643211
Q ss_pred -hc-------cCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 -RN-------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 -~~-------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.. ...++..+.+++.+|+..+|.+||++.++++.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~ 261 (267)
T cd08228 220 IEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQI 261 (267)
T ss_pred HhcCCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHH
Confidence 00 12355668999999999999999999998863
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.1e-30 Score=269.52 Aligned_cols=241 Identities=14% Similarity=0.199 Sum_probs=185.5
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc---hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ---DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~---~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
.+|++++.+|.|+ | .||.|.++.+|..|+||++...... ......+++|++.+++++||||+++++++....
T Consensus 2 ~~~~~~~~l~~g~~g--~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 77 (265)
T cd06652 2 TNWRLGKLLGQGAFG--RVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPM-- 77 (265)
T ss_pred CcceEeeEEecCCce--EEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCC--
Confidence 3699999999998 8 8999999999999999998643221 234668889999999999999999999887543
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
...+|+||||+ ++|.+++...... ....+..++.|++.||.|||+ .+++||||+|+||+++.+|.+||+|
T Consensus 78 ----~~~~~~v~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~~l~~~l~~lH~-~~i~H~dl~p~nil~~~~~~~~l~D 149 (265)
T cd06652 78 ----ERTLSIFMEHMPGGSIKDQLKSYGAL---TENVTRKYTRQILEGVSYLHS-NMIVHRDIKGANILRDSVGNVKLGD 149 (265)
T ss_pred ----CceEEEEEEecCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEecCCCCEEECc
Confidence 23789999999 4799988765432 233455669999999999996 8999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----hhc
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LRN 248 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----l~~ 248 (771)
||++............ .........|+|||+..+ ..++.++|+|||||++|++++|..||.... ...
T Consensus 150 fg~~~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~ 220 (265)
T cd06652 150 FGASKRLQTICLSGTG---MKSVTGTPYWMSPEVISG------EGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFK 220 (265)
T ss_pred Cccccccccccccccc---cccCCCCccccChhhhcC------CCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHH
Confidence 9998765431110000 011123448999999865 345678999999999999999998875321 100
Q ss_pred ------cC----CCCcchHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 249 ------TA----SIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 249 ------~~----~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
.. .++..+.+++.+|+. +|+.||+++++++|+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~ 262 (265)
T cd06652 221 IATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHT 262 (265)
T ss_pred HhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCc
Confidence 11 233456778888884 899999999999984
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.6e-30 Score=268.82 Aligned_cols=251 Identities=18% Similarity=0.214 Sum_probs=192.1
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccC
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENID 94 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d 94 (771)
+..+|++.+.++.|. | +||.|.++.+++.|++|++..... ..+.+.+|+..++++ .||||+++++.+......
T Consensus 4 ~~~~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~ 78 (275)
T cd06608 4 PTGIFELVEVIGEGTYG--KVYKARHKKTGQLVAIKIMDIIED---EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPP 78 (275)
T ss_pred chhheeheeeecCCCCe--EEEEEEECCCCcEEEEEEEecCch---hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCC
Confidence 346799999999997 7 999999999999999999986432 245688999999999 699999999999764310
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhC-CCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEE
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELG-LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~-~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~ 171 (771)
.....+|+||||+ ++|.+++.... .........+..++.|++.||.|||+ .+++||||+|+||+++.+|.+||+
T Consensus 79 --~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~-~~i~H~~l~p~ni~~~~~~~~~l~ 155 (275)
T cd06608 79 --GNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHE-NKVIHRDIKGQNILLTKNAEVKLV 155 (275)
T ss_pred --CcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhc-CCcccCCCCHHHEEEccCCeEEEC
Confidence 0034789999999 47888876532 11223455577789999999999996 899999999999999999999999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----hh
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LR 247 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----l~ 247 (771)
|||++......... .........|+|||++..... ....++.++|+|||||++|++++|..||.... +.
T Consensus 156 d~~~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~-~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~ 228 (275)
T cd06608 156 DFGVSAQLDSTLGR------RNTFIGTPYWMAPEVIACDEQ-PDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALF 228 (275)
T ss_pred CCccceecccchhh------hcCccccccccCHhHhccccc-ccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHH
Confidence 99998765432110 111233457999998754211 11345678999999999999999998875321 10
Q ss_pred c-----------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 248 N-----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 248 ~-----------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
. ...++..+.+++.+||..+|.+||++.++++|+|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~ 274 (275)
T cd06608 229 KIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPF 274 (275)
T ss_pred HhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCC
Confidence 0 1124567889999999999999999999999854
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-29 Score=264.39 Aligned_cols=241 Identities=19% Similarity=0.270 Sum_probs=194.5
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|.+.+.++.|+ | .||+|+++.++..|+||++..........+.+++|++.+++++||||+++++.+....
T Consensus 1 ~~~~~~~i~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~------ 72 (260)
T cd06606 1 EWTRGELLGRGSFG--SVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEE------ 72 (260)
T ss_pred CceeeeEeeecCce--EEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCC------
Confidence 488889999886 6 9999999999999999999876544455778899999999999999999999998642
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
+..+|+|||++ ++|.+++.... ......+..++.|++.+|.|||+ .+++||||+|+||+++.+|.+||+|||++
T Consensus 73 ~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~-~~~~h~dl~p~ni~i~~~~~~~l~d~~~~ 148 (260)
T cd06606 73 KNTLNIFLEYVSGGSLSSLLKKFG---KLPEPVIRKYTRQILEGLAYLHS-NGIVHRDIKGANILVDSDGVVKLADFGCA 148 (260)
T ss_pred CCeEEEEEEecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCHHHEEEcCCCCEEEcccccE
Confidence 14899999999 46988888764 23344566779999999999996 99999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh--------hh-
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE--------LR- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~--------l~- 247 (771)
.......... ..........|++||..... ..+.++|+|+|||++|++++|..++.... ..
T Consensus 149 ~~~~~~~~~~----~~~~~~~~~~y~~pE~~~~~------~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 218 (260)
T cd06606 149 KRLGDIETGE----GTGSVRGTPYWMAPEVIRGE------EYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGS 218 (260)
T ss_pred Eecccccccc----cccCCCCCccccCHhhhcCC------CCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccc
Confidence 8776532100 01112234489999998763 46789999999999999999998875432 00
Q ss_pred --c----cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 248 --N----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 248 --~----~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
. ...++..+.+++.+|+..+|.+||++.++++|++
T Consensus 219 ~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~ 259 (260)
T cd06606 219 SGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPF 259 (260)
T ss_pred cCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCC
Confidence 1 1245677999999999999999999999999954
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.5e-31 Score=280.53 Aligned_cols=238 Identities=19% Similarity=0.243 Sum_probs=193.5
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~ 99 (771)
|.+.+.+|.|. . .|-.|++--+|+.||||++++...++-....+.+|++.+|.++||||+++|+++.+ .
T Consensus 20 YDLekTlG~GHFA--VVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDT--------Q 89 (864)
T KOG4717|consen 20 YDLEKTLGRGHFA--VVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDT--------Q 89 (864)
T ss_pred ehhhhhhcCCcee--hhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcc--------c
Confidence 99999999986 5 78889999999999999999987777556678889999999999999999999987 4
Q ss_pred cEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEE-cCCCcEEEEccCcc
Q 004157 100 ITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV-TQTLDWKLHAFDVL 176 (771)
Q Consensus 100 ~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v-~~~G~~KL~dFgla 176 (771)
+.+|+|.|.= ++|+++|-+.... ..++.-+.++.||+.|+.|||+ ..+|||||||+||++ ..-|-+||.||||+
T Consensus 90 TKlyLiLELGD~GDl~DyImKHe~G--l~E~La~kYF~QI~~AI~YCHq-LHVVHRDLKPENVVFFEKlGlVKLTDFGFS 166 (864)
T KOG4717|consen 90 TKLYLILELGDGGDLFDYIMKHEEG--LNEDLAKKYFAQIVHAISYCHQ-LHVVHRDLKPENVVFFEKLGLVKLTDFGFS 166 (864)
T ss_pred ceEEEEEEecCCchHHHHHHhhhcc--ccHHHHHHHHHHHHHHHHHHhh-hhhhcccCCcceeEEeeecCceEeeecccc
Confidence 5899999987 5899999765321 2234445569999999999996 999999999999866 45799999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCCh----hhhh----c
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT----EELR----N 248 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~----~~l~----~ 248 (771)
-.+..... -..+++...|.|||++.++ .....++||||||+++|-|.+|++||+. +.+- .
T Consensus 167 Nkf~PG~k-------L~TsCGSLAYSAPEILLGD-----sYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDC 234 (864)
T KOG4717|consen 167 NKFQPGKK-------LTTSCGSLAYSAPEILLGD-----SYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDC 234 (864)
T ss_pred ccCCCcch-------hhcccchhhccCchhhhcC-----ccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcc
Confidence 77654211 1233455699999999986 3445689999999999999999999953 2222 2
Q ss_pred cCCCC----cchHHHHHHHhccCCCCCCChHHHhhCCCC
Q 004157 249 TASIP----KSLLPDYQRLLSSMPSRRLNSSKLIENSEY 283 (771)
Q Consensus 249 ~~~IP----~~l~~~i~~lL~~~P~~Rps~~~lL~~~~f 283 (771)
-+.+| ++..++|+.||..+|++|-+.+++..+.|.
T Consensus 235 KYtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wl 273 (864)
T KOG4717|consen 235 KYTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWL 273 (864)
T ss_pred cccCchhhhHHHHHHHHHHHhcCchhhccHHHHhccccc
Confidence 24455 567889999999999999999999887543
|
|
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-30 Score=282.15 Aligned_cols=246 Identities=18% Similarity=0.257 Sum_probs=196.1
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEeccc
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENI 93 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~ 93 (771)
+.+..|++.++||.|+ + .||++.. .+.+.|++|.+.....++..+.-+++|+..|.+|+ |-+|+++||+-..+
T Consensus 358 Vkg~~Yeilk~iG~GGSS--kV~kV~~-s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d-- 432 (677)
T KOG0596|consen 358 VKGREYEILKQIGSGGSS--KVFKVLN-SDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTD-- 432 (677)
T ss_pred ECcchhhHHHhhcCCCcc--eeeeeec-CCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccC--
Confidence 4556799999999997 5 9999985 46778888887766677778889999999999998 99999999997764
Q ss_pred CcCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 94 DATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
.++|+|||+= .+|...|+....... .-+++.+.+|++.|++++|+ .||||.||||.|.++ -.|.+||+|
T Consensus 433 ------~~lYmvmE~Gd~DL~kiL~k~~~~~~--~~~lk~ywkqML~aV~~IH~-~gIVHSDLKPANFLl-VkG~LKLID 502 (677)
T KOG0596|consen 433 ------GYLYMVMECGDIDLNKILKKKKSIDP--DWFLKFYWKQMLLAVKTIHQ-HGIVHSDLKPANFLL-VKGRLKLID 502 (677)
T ss_pred ------ceEEEEeecccccHHHHHHhccCCCc--hHHHHHHHHHHHHHHHHHHH-hceeecCCCcccEEE-EeeeEEeee
Confidence 3999999976 589999988764322 11567779999999999996 999999999999988 678999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhcccccccccc-----CCCCCcchHHHHHHHHHHHhhCCCCCChhh--
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVR-----KSPPWSIDSWGLGCLIYELFSGMRLSKTEE-- 245 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~-----~~~~~~~Di~SLG~li~el~~g~~p~~~~~-- 245 (771)
||++..+... ...+.....+++..||+||.+...-.... -..+.++|||||||++|+|+.|++||..-.
T Consensus 503 FGIA~aI~~D----TTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~ 578 (677)
T KOG0596|consen 503 FGIANAIQPD----TTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQ 578 (677)
T ss_pred echhcccCcc----ccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHH
Confidence 9999877653 22455556677789999999864322111 124578999999999999999999986432
Q ss_pred ---hh---------ccCCCCc--chHHHHHHHhccCCCCCCChHHHhhC
Q 004157 246 ---LR---------NTASIPK--SLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 246 ---l~---------~~~~IP~--~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
+. ....+|+ .+.++++.||..||++|+++.++|+|
T Consensus 579 ~aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 579 IAKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred HHHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 11 1123333 38999999999999999999999998
|
|
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.3e-30 Score=270.73 Aligned_cols=237 Identities=18% Similarity=0.154 Sum_probs=183.1
Q ss_pred CCCceecCCCCCCC-CceEEEEeEEC---CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSK---DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k---~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
...|++.+.||.|+ | .||+|+.+ ..+..|+||++..... ......+.+|+..+++++||||+++++++...
T Consensus 4 ~~~~~~~~~ig~G~fg--~V~~~~~~~~~~~~~~vaik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-- 78 (266)
T cd05064 4 NKSIKIERILGTGRFG--ELCRGCLKLPSKRELPVAIHTLRAGCS-DKQRRGFLAEALTLGQFDHSNIVRLEGVITRG-- 78 (266)
T ss_pred hHHeEEeeeecccCCC--eEEEEEEecCCCceeeEEEEecCCCCC-HHHHHHHHHHHHHHhcCCCCCcCeEEEEEecC--
Confidence 45699999999999 9 99999875 3457899999876432 23345688899999999999999999998753
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEE
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~ 171 (771)
..+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.++..||+
T Consensus 79 ------~~~~lv~e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~~i~~al~~lH~-~~iiH~dikp~nili~~~~~~~l~ 149 (266)
T cd05064 79 ------NTMMIVTEYMSNGALDSFLRKHEG--QLVAGQLMGMLPGLASGMKYLSE-MGYVHKGLAAHKVLVNSDLVCKIS 149 (266)
T ss_pred ------CCcEEEEEeCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHH-CCEeeccccHhhEEEcCCCcEEEC
Confidence 4789999999 468888876431 12234456669999999999996 999999999999999999999999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh----
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL---- 246 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l---- 246 (771)
|||.+....... .........+..|+|||++.+ ..++.++|+|||||++||+++ |..||.....
T Consensus 150 dfg~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~ 218 (266)
T cd05064 150 GFRRLQEDKSEA-----IYTTMSGKSPVLWAAPEAIQY------HHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVI 218 (266)
T ss_pred CCcccccccccc-----hhcccCCCCceeecCHHHHhh------CCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHH
Confidence 999876543211 011111122347999999865 356789999999999999875 8888753211
Q ss_pred ---------hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 247 ---------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 247 ---------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.....+|..+.+++.+|++.+|..||++.++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 219 KAVEDGFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred HHHHCCCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 112346778899999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=273.17 Aligned_cols=243 Identities=15% Similarity=0.137 Sum_probs=190.5
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
+...|++.+.+|.|. | +||.|+++.+|+.|+||++..... .......+.+|+++++.++||||+++++++...
T Consensus 13 ~~~~y~~~~~lg~g~~g--~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~--- 87 (307)
T cd06607 13 PEKLFTDLREIGHGSFG--AVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLRE--- 87 (307)
T ss_pred cchhhhhheeecCCCCe--EEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeC---
Confidence 456799999999997 7 999999999999999999875432 223456788999999999999999999999864
Q ss_pred cCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 95 ATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
...|+||||+ +.|.+.+..... ......+.+++.||+.||.|||+ .+++||||+|+||+++.+|.+||+||
T Consensus 88 -----~~~~lv~e~~~g~l~~~~~~~~~--~l~~~~~~~~~~ql~~~L~~LH~-~~i~H~dl~p~nIl~~~~~~~kL~df 159 (307)
T cd06607 88 -----HTAWLVMEYCLGSASDILEVHKK--PLQEVEIAAICHGALQGLAYLHS-HERIHRDIKAGNILLTEPGTVKLADF 159 (307)
T ss_pred -----CeEEEEHHhhCCCHHHHHHHccc--CCCHHHHHHHHHHHHHHHHHHHH-CCceecCCCcccEEECCCCCEEEeec
Confidence 3789999999 677777654322 12344566779999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------ 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------ 247 (771)
|++....... .......|+|||++.+.- ...++.++|+||||+++|||++|.+|+......
T Consensus 160 g~~~~~~~~~----------~~~~~~~y~aPE~~~~~~---~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~ 226 (307)
T cd06607 160 GSASLVSPAN----------SFVGTPYWMAPEVILAMD---EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI 226 (307)
T ss_pred CcceecCCCC----------CccCCccccCceeeeccC---CCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHH
Confidence 9886543211 122344799999874310 134667899999999999999999887532210
Q ss_pred ---c-----cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 ---N-----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 ---~-----~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
. ...++..+.+++.+||+.+|.+||++.+++.|++|..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 272 (307)
T cd06607 227 AQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLR 272 (307)
T ss_pred hcCCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcc
Confidence 0 1224567889999999999999999999999854433
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.9e-30 Score=270.24 Aligned_cols=243 Identities=18% Similarity=0.254 Sum_probs=192.3
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC---CCCeeEEeeeEEecccCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR---HPNILAFLHSTEVENIDA 95 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr---HPnIlkv~d~~e~e~~d~ 95 (771)
.|++.+.+|.|+ | .||+|+++.+++.|+||.+...... .....+.+|+++++.++ ||||++++++++..
T Consensus 2 ~y~~~~~l~~g~~g--~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~---- 74 (277)
T cd06917 2 LYQRLELIGRGAYG--AVYRGKHVPTGRVVALKIINLDTPD-DDVSDIQREVALLSQLRQSQPPNITKYYGSYLKG---- 74 (277)
T ss_pred hhhhhhheeccCCc--eEEEEEEcCCCcEEEEEEecCCCCc-hhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeC----
Confidence 388889999998 8 9999999999999999998764322 34566788999999997 99999999998763
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
...|+||||+ ++|.++++... .....+..++.||+.||.|||+ .+++||||+|+||+++.+|.++|+||
T Consensus 75 ----~~~~lv~e~~~~~~L~~~~~~~~----l~~~~~~~i~~~i~~~l~~lh~-~~i~H~dl~p~ni~i~~~~~~~l~df 145 (277)
T cd06917 75 ----PRLWIIMEYAEGGSVRTLMKAGP----IAEKYISVIIREVLVALKYIHK-VGVIHRDIKAANILVTNTGNVKLCDF 145 (277)
T ss_pred ----CEEEEEEecCCCCcHHHHHHccC----CCHHHHHHHHHHHHHHHHHHHh-CCcccCCcCHHHEEEcCCCCEEEccC
Confidence 4889999999 47888886642 2344466679999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc-----
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN----- 248 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~----- 248 (771)
|++......... .....+...|+|||.+.++ ..++.++|+|||||++|+|++|..|+.......
T Consensus 146 g~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~ 214 (277)
T cd06917 146 GVAALLNQNSSK------RSTFVGTPYWMAPEVITEG-----KYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLI 214 (277)
T ss_pred CceeecCCCccc------cccccCCcceeCHHHhccC-----CccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhcc
Confidence 998876543211 1112334579999987653 345678999999999999999999885432110
Q ss_pred -------c--CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcchhhh
Q 004157 249 -------T--ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKLVD 290 (771)
Q Consensus 249 -------~--~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n~lv~ 290 (771)
+ ..++..+.+++.+||+.+|.+||++.+++.| .||++....
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~-~~~~~~~~~ 264 (277)
T cd06917 215 PKSKPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKS-KWIKAHSKT 264 (277)
T ss_pred ccCCCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhC-hHhhccccC
Confidence 0 1266779999999999999999999999998 566554433
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.7e-30 Score=266.96 Aligned_cols=231 Identities=19% Similarity=0.232 Sum_probs=178.7
Q ss_pred CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEE
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIY 103 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iy 103 (771)
+.||.|+ | +||+|+++.+|+.|+||.+.... .......+.+|++++++++||||+++++++... ..+|
T Consensus 1 ~~lg~g~~g--~vy~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--------~~~~ 69 (252)
T cd05084 1 ERIGRGNFG--EVFSGRLRADNTPVAVKSCRETL-PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK--------QPIY 69 (252)
T ss_pred CccCcccCc--cEEEEEEecCCceEEEEecCccC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCC--------CCeE
Confidence 4678888 8 99999999999999999987543 233456788999999999999999999998763 3789
Q ss_pred EEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCC
Q 004157 104 IVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (771)
Q Consensus 104 IVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~ 181 (771)
+||||+ ++|.+++..... ......+..++.|++.||.|||+ .+++||||+|+||+++.+|.+||+|||++.....
T Consensus 70 lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~-~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 146 (252)
T cd05084 70 IVMELVQGGDFLTFLRTEGP--RLKVKELIQMVENAAAGMEYLES-KHCIHRDLAARNCLVTEKNVLKISDFGMSREEED 146 (252)
T ss_pred EEEeeccCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHh-CCccccccchheEEEcCCCcEEECccccCccccc
Confidence 999999 479888875432 12334456679999999999996 8999999999999999999999999999876543
Q ss_pred CCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh-------------h
Q 004157 182 NNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL-------------R 247 (771)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l-------------~ 247 (771)
....... .....+..|+|||.+.+. .++.++|+|||||++||+++ |..|+..... .
T Consensus 147 ~~~~~~~----~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 216 (252)
T cd05084 147 GVYASTG----GMKQIPVKWTAPEALNYG------RYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLP 216 (252)
T ss_pred ccccccC----CCCCCceeecCchhhcCC------CCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCC
Confidence 1100000 000122369999998663 46678999999999999997 7666632110 0
Q ss_pred ccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 248 NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 248 ~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
....+|..+.+++.+||..+|.+||++.++++
T Consensus 217 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 217 CPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred CcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 11345778999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.7e-30 Score=273.11 Aligned_cols=239 Identities=15% Similarity=0.197 Sum_probs=189.4
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
|++.+.||.|+ | +||.+.++.+++.|+||.+....... .....+.+|+.++++++||+|+.+++.+...
T Consensus 2 f~~~~~ig~G~~g--~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~------- 72 (285)
T cd05630 2 FRQYRVLGKGGFG--EVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETK------- 72 (285)
T ss_pred ceeeEEeecCCCe--EEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecC-------
Confidence 77888999998 8 99999999999999999998643322 2345567899999999999999999998763
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+|+||||+ ++|.+++....... .....+..++.|++.||.|||+ .+++||||||+||+++.++..+|+|||++
T Consensus 73 -~~~~lv~e~~~g~~L~~~l~~~~~~~-l~~~~~~~~~~qi~~~l~~lH~-~~iiH~dikp~Nil~~~~~~~~l~Dfg~~ 149 (285)
T cd05630 73 -DALCLVLTLMNGGDLKFHIYHMGEAG-FEEGRAVFYAAEICCGLEDLHQ-ERIVYRDLKPENILLDDHGHIRISDLGLA 149 (285)
T ss_pred -CEEEEEEEecCCCcHHHHHHHhcccC-CCHHHHHHHHHHHHHHHHHHHh-CCEEeCCCCHHHEEECCCCCEEEeeccce
Confidence 4899999999 47988886543221 2233456668999999999996 99999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-------hh--
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-------LR-- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-------l~-- 247 (771)
........ .....+...|+|||++.+ ..++.++|+|||||++|+|++|..||.... ..
T Consensus 150 ~~~~~~~~-------~~~~~g~~~y~aPE~~~~------~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~ 216 (285)
T cd05630 150 VHVPEGQT-------IKGRVGTVGYMAPEVVKN------ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERL 216 (285)
T ss_pred eecCCCcc-------ccCCCCCccccChHHHcC------CCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhh
Confidence 75532110 011234458999999875 356788999999999999999999886321 11
Q ss_pred -------ccCCCCcchHHHHHHHhccCCCCCCC-----hHHHhhCCCCCc
Q 004157 248 -------NTASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENSEYFQ 285 (771)
Q Consensus 248 -------~~~~IP~~l~~~i~~lL~~~P~~Rps-----~~~lL~~~~fF~ 285 (771)
....++..+.+++.+||+.+|.+|++ +.++++| +||.
T Consensus 217 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h-~~~~ 265 (285)
T cd05630 217 VKEVQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH-PLFK 265 (285)
T ss_pred hhhhhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC-hhhh
Confidence 11346777899999999999999999 8899998 5553
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-30 Score=267.90 Aligned_cols=239 Identities=19% Similarity=0.274 Sum_probs=189.7
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.++.|+ | .||+|.++.+|..|++|.+..........+.+++|++++++++||||+++++.++..
T Consensus 1 ~~~~~~~l~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~------- 71 (257)
T cd08225 1 RYEIIKKIGEGSFG--KIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQEN------- 71 (257)
T ss_pred CceEEEEecCCCcc--eEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccC-------
Confidence 589999999987 7 999999999999999999986533333456788999999999999999999998763
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCc-EEEEccCc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD-WKLHAFDV 175 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~-~KL~dFgl 175 (771)
..+|+|+||+ ++|.+++...... ......+..++.||+.||.|||+ .+++|+||+|+||+++.++. +||+|||+
T Consensus 72 -~~~~lv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~-~~i~H~dl~~~nil~~~~~~~~~l~d~~~ 148 (257)
T cd08225 72 -GRLFIVMEYCDGGDLMKRINRQRGV-LFSEDQILSWFVQISLGLKHIHD-RKILHRDIKSQNIFLSKNGMVAKLGDFGI 148 (257)
T ss_pred -CeEEEEEecCCCCcHHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHH-CCcccccCCHHHEEEcCCCCeEEeccccc
Confidence 4899999999 4798888764321 12344466679999999999996 89999999999999998865 69999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh--------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~-------- 247 (771)
+......... .....+...|+|||+..+ ..++.++|+|||||++|++++|..|+......
T Consensus 149 ~~~~~~~~~~------~~~~~~~~~~~ape~~~~------~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 216 (257)
T cd08225 149 ARQLNDSMEL------AYTCVGTPYYLSPEICQN------RPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQ 216 (257)
T ss_pred chhccCCccc------ccccCCCccccCHHHHcC------CCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhc
Confidence 8766432110 111223457999998765 24667899999999999999999887543211
Q ss_pred -----ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 248 -----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 248 -----~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
....++..+.+++.+|+..+|++||++.+++.|+|
T Consensus 217 ~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~ 256 (257)
T cd08225 217 GYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPF 256 (257)
T ss_pred ccCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCC
Confidence 11235677999999999999999999999999854
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.3e-30 Score=270.84 Aligned_cols=242 Identities=15% Similarity=0.214 Sum_probs=187.7
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~ 99 (771)
|++.+.+|.|+ | .||+|.++.++..+++|.+.... ....+.+.+|+++++.++||||+++++.+..+
T Consensus 7 ~~i~~~lg~g~~g--~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~-------- 74 (282)
T cd06643 7 WEIIGELGDGAFG--KVYKAQNKETGVLAAAKVIDTKS--EEELEDYMVEIDILASCDHPNIVKLLDAFYYE-------- 74 (282)
T ss_pred HHHHhhcccCCCe--EEEEEEECCCCeEEEEEEeCCCC--HHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeC--------
Confidence 78889999987 7 99999999999999999997542 33456788899999999999999999998763
Q ss_pred cEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 100 ITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 100 ~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
...|+|+||+ +.|..++..... ......+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||++.
T Consensus 75 ~~~~~v~e~~~~~~l~~~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH~-~~i~H~dlkp~nili~~~~~~kl~dfg~~~ 151 (282)
T cd06643 75 NNLWILIEFCAGGAVDAVMLELER--PLTEPQIRVVCKQTLEALNYLHE-NKIIHRDLKAGNILFTLDGDIKLADFGVSA 151 (282)
T ss_pred CEEEEEEEecCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCcccEEEccCCCEEEccccccc
Confidence 4889999999 467777654321 12234456669999999999996 899999999999999999999999999987
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-----------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----------- 246 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----------- 246 (771)
........ .........|++||++..... ....++.++|+|||||++|+|++|.+||.....
T Consensus 152 ~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~-~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~ 224 (282)
T cd06643 152 KNTRTIQR------RDSFIGTPYWMAPEVVMCETS-KDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSE 224 (282)
T ss_pred cccccccc------cccccccccccCHhhccccCC-CCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcC
Confidence 65331110 111234458999999753210 013456789999999999999999988753211
Q ss_pred ----hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 247 ----RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 247 ----~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
.....+|..+.+++.+||+.+|.+||++.++++| +||.
T Consensus 225 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~-~~~~ 266 (282)
T cd06643 225 PPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH-PFVT 266 (282)
T ss_pred CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC-CCEe
Confidence 0112456789999999999999999999999998 4553
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-29 Score=265.95 Aligned_cols=244 Identities=17% Similarity=0.258 Sum_probs=193.0
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.||.|+ | .||.|++..++..|+||++............+.+|+.++++++||||+++++.+..
T Consensus 1 ~y~~~~~lg~G~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-------- 70 (264)
T cd06626 1 RWQRGNKIGGGTFG--KVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVH-------- 70 (264)
T ss_pred CceeeeEeecCCCc--EEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEec--------
Confidence 589999999997 7 99999999999999999998765544567889999999999999999999998775
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
...+|+|+||+ ++|.+++...... ....+..++.||+.||.|||+ .+++|+||+|+||+++.+|.+||+|||++
T Consensus 71 ~~~~~lv~e~~~~~~L~~~~~~~~~~---~~~~~~~i~~~i~~~l~~lh~-~~i~H~dl~~~nil~~~~~~~kl~d~g~~ 146 (264)
T cd06626 71 REKVYIFMEYCSGGTLEELLEHGRIL---DEHVIRVYTLQLLEGLAYLHS-HGIVHRDIKPANIFLDHNGVIKLGDFGCA 146 (264)
T ss_pred CCEEEEEEecCCCCcHHHHHhhcCCC---ChHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECCCCCEEEcccccc
Confidence 34899999999 5799888765432 234456679999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh--h--------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE--L-------- 246 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~--l-------- 246 (771)
........... .. .........|+|||++.+.. ...+..++|+|+|||++|++++|..||...+ .
T Consensus 147 ~~~~~~~~~~~-~~-~~~~~~~~~~~~PE~~~~~~---~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~ 221 (264)
T cd06626 147 VKLKNNTTTMG-EE-VQSLAGTPAYMAPEVITGGK---GKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA 221 (264)
T ss_pred cccCCCCCccc-cc-ccCCcCCcCccChhhccCCC---CCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc
Confidence 87654321110 00 11123345899999987531 1236689999999999999999998875321 0
Q ss_pred ------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 247 ------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 247 ------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
.....++..+.+++.+||+.+|.+||++.+++.|+|
T Consensus 222 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~ 263 (264)
T cd06626 222 GHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPF 263 (264)
T ss_pred CCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcCCC
Confidence 011223667789999999999999999999999843
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.5e-30 Score=267.76 Aligned_cols=232 Identities=17% Similarity=0.252 Sum_probs=186.0
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEEE
Q 004157 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104 (771)
Q Consensus 27 ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iyI 104 (771)
||.|. | .||.|+++.+++.|+||++.+.... ....+.+.+|+++++.++||||+++++.++.. ..+|+
T Consensus 1 lg~g~~~--~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--------~~~~l 70 (262)
T cd05572 1 LGVGGFG--RVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDK--------KYIYM 70 (262)
T ss_pred CCCCCce--EEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcC--------CccEE
Confidence 46666 7 8999999999999999999865433 23456789999999999999999999998763 48999
Q ss_pred EecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCCC
Q 004157 105 VTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGN 182 (771)
Q Consensus 105 VtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~ 182 (771)
||||+ ++|.+++..... .....+.+++.||+.||.|||+ ++++|+||+|+||+++.+|.+||+|||++......
T Consensus 71 v~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~~i~~~l~~lH~-~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~ 146 (262)
T cd05572 71 LMEYCLGGELWTILRDRGL---FDEYTARFYIACVVLAFEYLHN-RGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSG 146 (262)
T ss_pred EEecCCCCcHHHHHhhcCC---CCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcc
Confidence 99998 579999877543 2344566779999999999996 99999999999999999999999999999876542
Q ss_pred CCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh------hh------cc-
Q 004157 183 NEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE------LR------NT- 249 (771)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~------l~------~~- 249 (771)
. ..........|++||.+.+ ..++.++|+|+|||++|++++|..|+.... .. ..
T Consensus 147 ~-------~~~~~~~~~~~~~PE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 213 (262)
T cd05572 147 Q-------KTWTFCGTPEYVAPEIILN------KGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKL 213 (262)
T ss_pred c-------ccccccCCcCccChhHhcC------CCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCC
Confidence 1 1112233457999999765 356678999999999999999998875433 11 11
Q ss_pred ---CCCCcchHHHHHHHhccCCCCCCC-----hHHHhhCCCCCcc
Q 004157 250 ---ASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENSEYFQN 286 (771)
Q Consensus 250 ---~~IP~~l~~~i~~lL~~~P~~Rps-----~~~lL~~~~fF~n 286 (771)
..++..+.+++.+||..+|.+|++ +.++++| +||++
T Consensus 214 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~-~~~~~ 257 (262)
T cd05572 214 EFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKH-KWFNG 257 (262)
T ss_pred CCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcC-hhhhC
Confidence 234677899999999999999999 8999998 55654
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-30 Score=271.03 Aligned_cols=238 Identities=17% Similarity=0.194 Sum_probs=191.0
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|++.+.||.|. | .||++.++.+++.|+||.+...... .....+.+|++++++++||||+++++.+..+
T Consensus 2 ~~~~~~~ig~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------- 71 (265)
T cd06605 2 DLEYLGELGAGNSG--VVSKVLHRPTGKIMAVKTIRLEINE-AIQKQILRELDILHKCNSPYIVGFYGAFYNN------- 71 (265)
T ss_pred cchHHHHhcCCCCe--EEEEEEEcCCCcEEEEEEEecccCh-HHHHHHHHHHHHHHHCCCCchhhhheeeecC-------
Confidence 488889999998 7 8999999999999999999875433 3456778899999999999999999999874
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+|+|+||+ .+|.+++.... .......+..++.||+.||.|||+..+++||||+|+||+++.+|.+||+|||.+
T Consensus 72 -~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~ 148 (265)
T cd06605 72 -GDISICMEYMDGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVS 148 (265)
T ss_pred -CEEEEEEEecCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccc
Confidence 4899999999 47999887653 122344566779999999999995489999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh---------hh
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE---------LR 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~---------l~ 247 (771)
........ . .......|+|||...+ ..++.++|+|||||++|++++|..|+.... +.
T Consensus 149 ~~~~~~~~-------~-~~~~~~~y~~PE~~~~------~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~ 214 (265)
T cd06605 149 GQLVNSLA-------K-TFVGTSSYMAPERIQG------NDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQ 214 (265)
T ss_pred hhhHHHHh-------h-cccCChhccCHHHHcC------CCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHH
Confidence 76533110 0 1233457999999876 356788999999999999999998774321 11
Q ss_pred c-----c----C-CCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 N-----T----A-SIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 ~-----~----~-~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
. . . .++..+.+++.+||..+|.+||++.+++.| +||+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~-~~~~ 261 (265)
T cd06605 215 YIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH-PFIK 261 (265)
T ss_pred HHhcCCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC-chhh
Confidence 0 0 1 156678999999999999999999999998 5554
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-30 Score=281.66 Aligned_cols=247 Identities=14% Similarity=0.125 Sum_probs=189.2
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.|++.+.||.|+ | +||+++++.+++.|+||++.+... .......+++|+.+++.++||||+++++.++.+
T Consensus 2 ~y~i~~~lG~G~fg--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~------ 73 (331)
T cd05624 2 DFEIIKVIGRGAFG--EVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDE------ 73 (331)
T ss_pred CceEEEEEeeCCCe--EEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcC------
Confidence 599999999998 8 999999999999999999975321 223345678899999999999999999999864
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
.++||||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~Ey~~gg~L~~~l~~~~~--~l~~~~~~~~~~qi~~~L~~lH~-~~iiHrDlkp~Nill~~~~~~kl~DfG~ 148 (331)
T cd05624 74 --NYLYLVMDYYVGGDLLTLLSKFED--RLPEDMARFYIAEMVLAIHSIHQ-LHYVHRDIKPDNVLLDMNGHIRLADFGS 148 (331)
T ss_pred --CEEEEEEeCCCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH-CCeeeccCchHHEEEcCCCCEEEEeccc
Confidence 4899999999 579999976421 12234456668999999999996 9999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh--------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~-------- 247 (771)
+........ .......++..|+|||++.+... ....++.++|+|||||++|+|++|..||......
T Consensus 149 a~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~-~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~ 222 (331)
T cd05624 149 CLKMNQDGT-----VQSSVAVGTPDYISPEILQAMED-GMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 222 (331)
T ss_pred eeeccCCCc-----eeeccccCCcccCCHHHHhcccc-CCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHc
Confidence 876643211 11111234558999999864210 0023567899999999999999999988543210
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCC--CCChHHHhhCCCCCcc
Q 004157 248 ---------NTASIPKSLLPDYQRLLSSMPSR--RLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 ---------~~~~IP~~l~~~i~~lL~~~P~~--Rps~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||...+.+ |++++++++| .||.+
T Consensus 223 ~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h-~~f~~ 271 (331)
T cd05624 223 HEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH-AFFEG 271 (331)
T ss_pred CCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC-CCcCC
Confidence 11235677889999999865544 5689999988 66765
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.7e-30 Score=270.22 Aligned_cols=246 Identities=17% Similarity=0.208 Sum_probs=192.2
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
+..+|++.+++|.|. | +||+|.++.++..|++|++... .....+.+.+|++++++++||||+++++.+...
T Consensus 3 ~~~~~~i~~~l~~g~~~--~v~~~~~~~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---- 74 (280)
T cd06611 3 PNDIWEIIGELGDGAFG--KVYKAQHKETGLFAAAKIIQIE--SEEELEDFMVEIDILSECKHPNIVGLYEAYFYE---- 74 (280)
T ss_pred chhHHHHHHHhcCCCCc--eEEEEEEcCCCcEEEEEEEeeC--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecC----
Confidence 345699999999998 8 9999999989999999999754 233456788899999999999999999999863
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+|+||||+ +.|.+++..... ......+..++.|++.||.|||+ .+++||||+|+||+++.+|.+||+||
T Consensus 75 ----~~~~lv~e~~~~~~L~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lh~-~~i~h~dl~p~nili~~~~~~~l~d~ 147 (280)
T cd06611 75 ----NKLWILIEFCDGGALDSIMLELER--GLTEPQIRYVCRQMLEALNFLHS-HKVIHRDLKAGNILLTLDGDVKLADF 147 (280)
T ss_pred ----CeEEEEeeccCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCChhhEEECCCCCEEEccC
Confidence 4889999999 478888876432 12344566779999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------ 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------ 247 (771)
|++......... ......+..|++||++...... ...++.++|+|||||++|+|++|.+||......
T Consensus 148 g~~~~~~~~~~~------~~~~~~~~~y~~PE~~~~~~~~-~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~ 220 (280)
T cd06611 148 GVSAKNKSTLQK------RDTFIGTPYWMAPEVVACETFK-DNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKI 220 (280)
T ss_pred ccchhhcccccc------cceeecchhhcCHHHHhhcccC-CCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHH
Confidence 987655332110 1122344579999997532100 123556899999999999999999888543211
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 ---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 ---------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
....++..+.+++.+||..+|.+||++.++++| +||.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~-~~~~ 266 (280)
T cd06611 221 LKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH-PFVS 266 (280)
T ss_pred hcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC-hhhc
Confidence 112356678999999999999999999999998 4443
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=263.41 Aligned_cols=238 Identities=20% Similarity=0.327 Sum_probs=193.7
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.+|.|. | .||.|+++.+++.|+||.+......+.....+.+|++.+++++||||+++++++...
T Consensus 1 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 71 (254)
T cd06627 1 NYQLGDLIGRGAFG--VVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETS------- 71 (254)
T ss_pred CceeeeEEcccCCe--EEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeC-------
Confidence 588999999997 7 999999999999999999987655445677899999999999999999999998763
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+|+|||++ .+|.+++..... .....+..++.|++.||.|||+ .+++||||+|+||+++.+|.+||+|||++
T Consensus 72 -~~~~~v~e~~~~~~L~~~~~~~~~---l~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~ni~i~~~~~~~l~d~~~~ 146 (254)
T cd06627 72 -DSLYIILEYAENGSLRQIIKKFGP---FPESLVAVYVYQVLQGLAYLHE-QGVIHRDIKAANILTTKDGVVKLADFGVA 146 (254)
T ss_pred -CEEEEEEecCCCCcHHHHHHhccC---CCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCHHHEEECCCCCEEEeccccc
Confidence 4899999999 479888876532 2345567779999999999996 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh---------h
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL---------R 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l---------~ 247 (771)
......... .........|++||...+. .++.++|+|+||+++|++++|..++..... .
T Consensus 147 ~~~~~~~~~------~~~~~~~~~y~~pe~~~~~------~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~ 214 (254)
T cd06627 147 TKLNDVSKD------DASVVGTPYWMAPEVIEMS------GASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQD 214 (254)
T ss_pred eecCCCccc------ccccccchhhcCHhhhcCC------CCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcc
Confidence 877543211 1112234479999998652 466789999999999999999988743210 0
Q ss_pred ----ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 248 ----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 248 ----~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
....++..+.+++.+||..+|++||++.+++.+ +||
T Consensus 215 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~-~~~ 254 (254)
T cd06627 215 DHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKH-PWI 254 (254)
T ss_pred CCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcC-CCC
Confidence 113466789999999999999999999999988 443
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=265.84 Aligned_cols=237 Identities=18% Similarity=0.221 Sum_probs=188.0
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
+|++.+.+|.|+ | .||+|+.+.+|+.|+||.+...... ......+.+|++++++++||||+++++.+...
T Consensus 3 ~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~------ 74 (267)
T cd08224 3 NFKIEKKIGKGQFS--VVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIEN------ 74 (267)
T ss_pred ceeeeeeeccCCce--EEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecC------
Confidence 699999999998 8 9999999999999999998753332 23466788999999999999999999999864
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCC-CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLE-GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~-~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
...|+||||+ ++|..++...... .......+..++.||+.||.|||+ .+++||||+|+||+++.+|.++|+|||
T Consensus 75 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~-~~i~h~dl~p~nil~~~~~~~~l~d~~ 151 (267)
T cd08224 75 --NELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHS-KRIMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred --CeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHh-CCEecCCcChhhEEECCCCcEEEeccc
Confidence 3789999999 4899888764321 112344466669999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh------h-
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------R- 247 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l------~- 247 (771)
++......... .........|+|||.+.+ ..++.++|+|||||++|+|++|..|+..... .
T Consensus 152 ~~~~~~~~~~~------~~~~~~~~~y~apE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 219 (267)
T cd08224 152 LGRFFSSKTTA------AHSLVGTPYYMSPERIHE------NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKK 219 (267)
T ss_pred eeeeccCCCcc------cceecCCccccCHHHhcc------CCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhh
Confidence 98765432110 111233457999998865 3567789999999999999999988743211 0
Q ss_pred ----cc-----CCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 248 ----NT-----ASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 248 ----~~-----~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.. ..++..+.+++.+||..+|.+||++.++++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 220 IEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred hhcCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 01 145557899999999999999999998875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-30 Score=281.10 Aligned_cols=248 Identities=13% Similarity=0.122 Sum_probs=189.7
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.|++.+.||.|+ | +||+++.+.+++.|+||++.+... .......+++|+.+++.++||+|+++++.++.+
T Consensus 2 ~y~~~~~lG~G~fg--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------ 73 (332)
T cd05623 2 DFEILKVIGRGAFG--EVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDE------ 73 (332)
T ss_pred CceEEEEEEeCCCe--EEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecC------
Confidence 599999999998 8 999999999999999999975321 123345578899999999999999999999864
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+|+||||+ ++|.+++.+... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~ey~~~g~L~~~l~~~~~--~l~~~~~~~~~~qi~~al~~lH~-~~iiHrDlkp~Nili~~~~~~kL~DfG~ 148 (332)
T cd05623 74 --NNLYLVMDYYVGGDLLTLLSKFED--RLPEDMARFYLAEMVIAIDSVHQ-LHYVHRDIKPDNILMDMNGHIRLADFGS 148 (332)
T ss_pred --CEEEEEEeccCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHEEECCCCCEEEeecch
Confidence 4899999999 579999976422 12334456669999999999996 9999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh--------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~-------- 247 (771)
+........ .......++..|+|||++.+.-. ....++.++|+|||||++|||++|..||......
T Consensus 149 a~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~-~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~ 222 (332)
T cd05623 149 CLKLMEDGT-----VQSSVAVGTPDYISPEILQAMED-GKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 222 (332)
T ss_pred heecccCCc-----ceecccccCccccCHHHHhcccc-CCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhC
Confidence 876543211 11112234568999999863100 0134667899999999999999999988543210
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCC--CCCChHHHhhCCCCCcch
Q 004157 248 ---------NTASIPKSLLPDYQRLLSSMPS--RRLNSSKLIENSEYFQNK 287 (771)
Q Consensus 248 ---------~~~~IP~~l~~~i~~lL~~~P~--~Rps~~~lL~~~~fF~n~ 287 (771)
....+++.+.+++++||..++. .|+++.++++| +||.+.
T Consensus 223 ~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h-~~f~~~ 272 (332)
T cd05623 223 HKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH-PFFTGI 272 (332)
T ss_pred CCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC-CCcCCC
Confidence 0124577789999999865444 37899999998 677653
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-30 Score=282.00 Aligned_cols=246 Identities=18% Similarity=0.281 Sum_probs=192.8
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
..+|.+.+.+|.|+ | +||.|+++.+|+.|+||.+............+.+|+.+++.++||||+++++++......
T Consensus 4 ~~~y~~~~~lg~G~~~--~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~-- 79 (337)
T cd07858 4 DTKYVPIKPIGRGAYG--IVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHRE-- 79 (337)
T ss_pred ccceeEEEEeccCCCe--EEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheeccccc--
Confidence 35799999999998 8 999999999999999999876433333345677899999999999999999988653211
Q ss_pred CcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 97 ~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
....+|+|+||+ ++|.++++.... .....+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||+
T Consensus 80 -~~~~~~lv~e~~~~~L~~~~~~~~~---l~~~~~~~i~~qi~~aL~~LH~-~~i~H~dlkp~Nil~~~~~~~kL~Dfg~ 154 (337)
T cd07858 80 -AFNDVYIVYELMDTDLHQIIRSSQT---LSDDHCQYFLYQLLRGLKYIHS-ANVLHRDLKPSNLLLNANCDLKICDFGL 154 (337)
T ss_pred -ccCcEEEEEeCCCCCHHHHHhcCCC---CCHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEEcCCCCEEECcCcc
Confidence 123689999999 578888875432 3345567779999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh---------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--------- 246 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l--------- 246 (771)
+........ ......++..|+|||.+... ..++.++|+|||||++|+|++|.++|...+.
T Consensus 155 ~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~-----~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~ 223 (337)
T cd07858 155 ARTTSEKGD------FMTEYVVTRWYRAPELLLNC-----SEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITE 223 (337)
T ss_pred ccccCCCcc------cccccccccCccChHHHhcC-----CCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHH
Confidence 976643211 01122345589999987642 2466789999999999999999988743210
Q ss_pred ----------------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 247 ----------------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 247 ----------------------------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
.....++..+.+++++||+.+|.+||++.++++| +||
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h-~~~ 294 (337)
T cd07858 224 LLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH-PYL 294 (337)
T ss_pred HhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC-cch
Confidence 0013466778899999999999999999999999 444
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.9e-30 Score=279.15 Aligned_cols=248 Identities=16% Similarity=0.147 Sum_probs=185.0
Q ss_pred cCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEE
Q 004157 24 GDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITI 102 (771)
Q Consensus 24 ~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~i 102 (771)
.+.||.|. +.-+||.+.++.+|+.|+||++......+...+.+++|+.+++.++||||+++++++... ..+
T Consensus 3 ~~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~--------~~~ 74 (328)
T cd08226 3 QVEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTG--------SWL 74 (328)
T ss_pred HHHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecC--------Cce
Confidence 34566664 222899999999999999999987655555668899999999999999999999999863 378
Q ss_pred EEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccC
Q 004157 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (771)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~ 180 (771)
|+|+||+ ++|.+++.+.... ......+..++.||+.||.|||+ ++++||||||+||+++.+|.+|++||+.+....
T Consensus 75 ~~v~e~~~~~~l~~~l~~~~~~-~~~~~~~~~~~~qi~~aL~~lH~-~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~ 152 (328)
T cd08226 75 WVISPFMAYGSANSLLKTYFPE-GMSEALIGNILFGALRGLNYLHQ-NGYIHRNIKASHILISGDGLVSLSGLSHLYSLV 152 (328)
T ss_pred EEEEecccCCCHHHHHHhhccc-CCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEeCCCcEEEechHHHhhhh
Confidence 9999999 4788888765322 23345566779999999999996 899999999999999999999999998765443
Q ss_pred CCCCCCCCCccccc-cccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----h-hc------
Q 004157 181 GNNEAANGPMLQYA-WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----L-RN------ 248 (771)
Q Consensus 181 ~~~~~~~~~~~~~~-~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----l-~~------ 248 (771)
.........+.... ......|++||++.+.. ..++.++|+|||||++|+|++|..||.... . ..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~----~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~ 228 (328)
T cd08226 153 RNGQKAKVVYDFPQFSTSVLPWLSPELLRQDL----YGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPY 228 (328)
T ss_pred ccCccccccccccccccCccCccChhhhcCCC----CCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCC
Confidence 21111100000000 11234699999987532 235678999999999999999998875321 0 00
Q ss_pred ------------------------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 249 ------------------------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 249 ------------------------------------------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
....+..+.+++++||..+|.+||++.++++|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~ 308 (328)
T cd08226 229 SPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH 308 (328)
T ss_pred CCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 00123457889999999999999999999998
Q ss_pred CCCCcc
Q 004157 281 SEYFQN 286 (771)
Q Consensus 281 ~~fF~n 286 (771)
+||.+
T Consensus 309 -~~~~~ 313 (328)
T cd08226 309 -AFFKQ 313 (328)
T ss_pred -HHHHH
Confidence 45544
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.6e-30 Score=284.85 Aligned_cols=240 Identities=15% Similarity=0.152 Sum_probs=184.5
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCC-----CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEe
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDD-----GSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEV 90 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~-----g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~ 90 (771)
..+|++++.||.|+ | .||+|+++.. +..|+||++...... ...+.+.+|+++++.+ +||||+++++.+..
T Consensus 37 ~~~~~~~~~LG~G~fg--~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~ 113 (374)
T cd05106 37 RDNLQFGKTLGAGAFG--KVVEATAFGLGKEDNVLRVAVKMLKASAHT-DEREALMSELKILSHLGQHKNIVNLLGACTH 113 (374)
T ss_pred HHHceehheecCCCcc--cEEEEEEecCCcccccceeEEEeccCCCCH-HHHHHHHHHHHHHHhhccCCceeeEeeEecC
Confidence 34599999999998 8 8999986543 357999999765333 3456788999999999 89999999999876
Q ss_pred cccCcCCcccEEEEEecCC--cchHHHHHHhCC-----------------------------------------------
Q 004157 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGL----------------------------------------------- 121 (771)
Q Consensus 91 e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~----------------------------------------------- 121 (771)
. ..+|+||||| ++|.+++.....
T Consensus 114 ~--------~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (374)
T cd05106 114 G--------GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMR 185 (374)
T ss_pred C--------CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccC
Confidence 3 3789999999 679988865320
Q ss_pred --------------------CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCC
Q 004157 122 --------------------EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (771)
Q Consensus 122 --------------------~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~ 181 (771)
........+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|||++.....
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~-~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~ 264 (374)
T cd05106 186 PVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLAS-KNCIHRDVAARNVLLTDGRVAKICDFGLARDIMN 264 (374)
T ss_pred CccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHH-CCEEeccCchheEEEeCCCeEEEeeceeeeeccC
Confidence 0011233456779999999999996 8999999999999999999999999999976543
Q ss_pred CCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh--------------
Q 004157 182 NNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL-------------- 246 (771)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l-------------- 246 (771)
.... ........+..|+|||++.+ ..++.++|+|||||++|+|++ |..||.....
T Consensus 265 ~~~~----~~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~ 334 (374)
T cd05106 265 DSNY----VVKGNARLPVKWMAPESIFD------CVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQM 334 (374)
T ss_pred Ccce----eeccCCCCccceeCHHHhcC------CCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCc
Confidence 2110 00001122346999999865 356789999999999999997 8888743211
Q ss_pred hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 247 RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 247 ~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.....+|..+.+++.+||+.+|.+||++.++++
T Consensus 335 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 335 SRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQ 367 (374)
T ss_pred cCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 011246788999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=266.38 Aligned_cols=238 Identities=16% Similarity=0.219 Sum_probs=193.0
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|++.+.||.|+ | .||+|+++.+|+.|+||++...... .....+.+|++.+++++||||+++++.+...
T Consensus 2 ~~~~~~~i~~g~~~--~v~~~~~~~~~~~~~vk~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 71 (264)
T cd06623 2 DLERVKVLGQGSSG--VVYKVRHKPTGKIYALKKIHVDGDE-EFRKQLLRELKTLRSCESPYVVKCYGAFYKE------- 71 (264)
T ss_pred cceeeeeeeecCCe--EEEEEEEcCCCcEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEccC-------
Confidence 588999999987 7 9999999999999999999875433 4467788999999999999999999999864
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
...|+||||+ ++|.+++..... .....+..++.||+.||.|||+..+++||||+|+||+++.+|.++|+|||++
T Consensus 72 -~~~~lv~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~ 147 (264)
T cd06623 72 -GEISIVLEYMDGGSLADLLKKVGK---IPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGIS 147 (264)
T ss_pred -CeEEEEEEecCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccc
Confidence 4899999999 579999876532 2344566779999999999994389999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-------hh--
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-------LR-- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-------l~-- 247 (771)
......... .........|+|||.... ..++.++|+|+||+++|+|++|..|+.... ..
T Consensus 148 ~~~~~~~~~------~~~~~~~~~y~~pE~~~~------~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~ 215 (264)
T cd06623 148 KVLENTLDQ------CNTFVGTVTYMSPERIQG------ESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAI 215 (264)
T ss_pred eecccCCCc------ccceeecccccCHhhhCC------CCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHH
Confidence 876542211 011223457999999876 356778999999999999999998875442 00
Q ss_pred -------ccCC-CCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 248 -------NTAS-IPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 248 -------~~~~-IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
.... +|..+.+++++||+.+|+.||++.++++| +||
T Consensus 216 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~-~~~ 259 (264)
T cd06623 216 CDGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH-PFI 259 (264)
T ss_pred hcCCCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC-HHH
Confidence 0122 67789999999999999999999999998 444
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.3e-30 Score=271.89 Aligned_cols=240 Identities=15% Similarity=0.188 Sum_probs=189.1
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
|++.+.||.|+ | +||.|.+..+++.|+||++....... .....+.+|+++|++++||||+.+++.+..+
T Consensus 2 ~~~~~~lg~G~~g--~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~------- 72 (285)
T cd05632 2 FRQYRVLGKGGFG--EVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETK------- 72 (285)
T ss_pred ceEEEEEecCCCe--EEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecC-------
Confidence 77888899998 8 99999999999999999997643222 2345577899999999999999999998763
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+|+||||+ ++|..++...... ......+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++
T Consensus 73 -~~~~lv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~ql~~~l~~lH~-~~iiH~dikp~Nili~~~~~~kl~Dfg~~ 149 (285)
T cd05632 73 -DALCLVLTIMNGGDLKFHIYNMGNP-GFEEERALFYAAEILCGLEDLHR-ENTVYRDLKPENILLDDYGHIRISDLGLA 149 (285)
T ss_pred -CEEEEEEEeccCccHHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHh-CCeeecCCCHHHEEECCCCCEEEecCCcc
Confidence 4899999999 4688777654321 12344566679999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL---------- 246 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l---------- 246 (771)
........ .....++..|+|||++.+ ..++.++|+|||||++|++++|..||.....
T Consensus 150 ~~~~~~~~-------~~~~~g~~~~~aPE~~~~------~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~ 216 (285)
T cd05632 150 VKIPEGES-------IRGRVGTVGYMAPEVLNN------QRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRR 216 (285)
T ss_pred eecCCCCc-------ccCCCCCcCccChHHhcC------CCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 76532110 112234568999999875 3567789999999999999999998853211
Q ss_pred ------hccCCCCcchHHHHHHHhccCCCCCCC-----hHHHhhCCCCCcc
Q 004157 247 ------RNTASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENSEYFQN 286 (771)
Q Consensus 247 ------~~~~~IP~~l~~~i~~lL~~~P~~Rps-----~~~lL~~~~fF~n 286 (771)
.....++..+.+++.+||+.+|.+||+ +.+++.| .||++
T Consensus 217 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~-~~~~~ 266 (285)
T cd05632 217 VLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH-PFFRN 266 (285)
T ss_pred hhccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC-hhhhc
Confidence 011346677889999999999999999 7788887 56654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.4e-30 Score=270.50 Aligned_cols=242 Identities=21% Similarity=0.328 Sum_probs=190.0
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~ 99 (771)
|++.+.+|.|+ | .||+|+++.+|+.|+||++......+.....+.+|+++++.++||||+++++.+.... +
T Consensus 1 y~~~~~l~~g~~~--~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~------~ 72 (287)
T cd07840 1 YEKIAQIGEGTYG--QVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKG------K 72 (287)
T ss_pred CeeeEEeccCCCe--EEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCC------C
Confidence 78889999987 7 9999999999999999999876534444566788999999999999999999997642 1
Q ss_pred cEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccc
Q 004157 100 ITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (771)
Q Consensus 100 ~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~ 178 (771)
..+|+|+||+ ++|..++..... ......+..++.||+.||.|||+ .+++|+||+|+||+++.+|.+||+|||++..
T Consensus 73 ~~~~lv~e~~~~~l~~~~~~~~~--~~~~~~~~~i~~~i~~al~~LH~-~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~ 149 (287)
T cd07840 73 GSIYMVFEYMDHDLTGLLDSPEV--KFTESQIKCYMKQLLEGLQYLHS-NGILHRDIKGSNILINNDGVLKLADFGLARP 149 (287)
T ss_pred CcEEEEeccccccHHHHHhccCC--CCCHHHHHHHHHHHHHHHHHHHH-CCceeccCcHHHeEEcCCCCEEEccccceee
Confidence 4899999999 578777765421 23344566779999999999996 8999999999999999999999999999987
Q ss_pred cCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh------------
Q 004157 179 FDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------------ 246 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l------------ 246 (771)
........ .........|+|||.+.+. ..++.++|+|+|||++|+|++|..++.....
T Consensus 150 ~~~~~~~~-----~~~~~~~~~y~~PE~~~~~-----~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~ 219 (287)
T cd07840 150 YTKRNSAD-----YTNRVITLWYRPPELLLGA-----TRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCG 219 (287)
T ss_pred ccCCCccc-----ccccccccccCCceeeEcc-----ccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Confidence 65432100 0111234479999987642 2456789999999999999999988743210
Q ss_pred -------h-----------------------ccCC-CCcchHHHHHHHhccCCCCCCChHHHhhCCCC
Q 004157 247 -------R-----------------------NTAS-IPKSLLPDYQRLLSSMPSRRLNSSKLIENSEY 283 (771)
Q Consensus 247 -------~-----------------------~~~~-IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~f 283 (771)
. .... ++..+.+++++||+.+|.+||++.+++++.||
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 220 SPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred CCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 0 0011 26778899999999999999999999998543
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-29 Score=267.03 Aligned_cols=245 Identities=12% Similarity=0.119 Sum_probs=186.9
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCC---CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDG---SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g---~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
|++++.+|.|+ | .||.|+.+.++ ..|+||++............+.+|++.++.++||||+++++.+......
T Consensus 1 ~~~~~~lg~G~~g--~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~-- 76 (273)
T cd05035 1 LKLGKILGEGEFG--SVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSL-- 76 (273)
T ss_pred CccccccCcCCCc--eEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCcc--
Confidence 67899999998 8 99999987644 7899999986544445567789999999999999999999987653310
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCC---CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEE
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLE---GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~---~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~ 171 (771)
......|+|+||+ ++|..++...... .......+..++.|++.||.|||+ .+++||||||+||++++++.+||+
T Consensus 77 ~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~-~~i~H~dlkp~Nil~~~~~~~kl~ 155 (273)
T cd05035 77 QKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSN-RNFIHRDLAARNCMLREDMTVCVA 155 (273)
T ss_pred ccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHh-CCeeccccchheEEECCCCeEEEC
Confidence 0023579999999 5788888654321 123344566679999999999996 899999999999999999999999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh----
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL---- 246 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l---- 246 (771)
|||+++.......... ......+..|++||++.+ ..++.++|+|||||++|||++ |..|+.....
T Consensus 156 dfg~~~~~~~~~~~~~----~~~~~~~~~~~~pe~~~~------~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~ 225 (273)
T cd05035 156 DFGLSKKIYSGDYYRQ----GRIAKMPVKWIAIESLAD------RVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIY 225 (273)
T ss_pred Cccceeeccccccccc----cccccCCccccCHhhccc------CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 9999886644211100 111122347999998765 356789999999999999998 7677643211
Q ss_pred ---------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 ---------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 ---------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....++..+.+++.+||+.+|.+||++.+++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 226 DYLRHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred HHHHcCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 1123567789999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.6e-30 Score=271.43 Aligned_cols=239 Identities=17% Similarity=0.212 Sum_probs=190.9
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
..|+..+++|.|. | .||.|+++.+++.|+||++..... ......+.+|++.+++++||||+++++.+...
T Consensus 4 ~~y~~~~~lg~g~~~--~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------ 74 (277)
T cd06640 4 ELFTKLERIGKGSFG--EVFKGIDNRTQQVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKG------ 74 (277)
T ss_pred HhhhhhhhcccCCCe--EEEEEEEccCCEEEEEEEEecccc-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC------
Confidence 3588889999998 8 999999999999999999986432 23467788999999999999999999999863
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+|+||||+ ++|.+++..... ....+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||+
T Consensus 75 --~~~~lv~e~~~~~~L~~~i~~~~l----~~~~~~~~~~~l~~~l~~lh~-~~ivH~dl~p~Nil~~~~~~~~l~dfg~ 147 (277)
T cd06640 75 --TKLWIIMEYLGGGSALDLLRAGPF----DEFQIATMLKEILKGLDYLHS-EKKIHRDIKAANVLLSEQGDVKLADFGV 147 (277)
T ss_pred --CEEEEEEecCCCCcHHHHHhcCCC----CHHHHHHHHHHHHHHHHHHHh-CCccCcCCChhhEEEcCCCCEEEccccc
Confidence 4899999999 478888875432 234466679999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh--------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~-------- 247 (771)
+......... .........|+|||++.+ ...+.++|+|||||++|||++|..|+......
T Consensus 148 ~~~~~~~~~~------~~~~~~~~~y~apE~~~~------~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~ 215 (277)
T cd06640 148 AGQLTDTQIK------RNTFVGTPFWMAPEVIQQ------SAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPK 215 (277)
T ss_pred ceeccCCccc------cccccCcccccCHhHhcc------CCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhc
Confidence 8766432110 111123347999999865 34667899999999999999999887532110
Q ss_pred -----ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 -----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 -----~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....+|..+.+++.+||+.+|..||++.++++| .||.+
T Consensus 216 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~-~~~~~ 258 (277)
T cd06640 216 NNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH-KFIVK 258 (277)
T ss_pred CCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC-hHhhh
Confidence 112356678899999999999999999999998 45543
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=9e-30 Score=269.81 Aligned_cols=238 Identities=17% Similarity=0.294 Sum_probs=190.6
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~ 99 (771)
|++.+.+|.|. | .||+|+...+++.|+||++......+...+.+.+|+.++++++||||++++++++..
T Consensus 1 y~~~~~ig~g~~~--~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-------- 70 (282)
T cd07829 1 YEKLEKLGEGTYG--VVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTE-------- 70 (282)
T ss_pred CeeehcccccCcc--eEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcC--------
Confidence 67788899988 8 899999999999999999987654444556778899999999999999999999863
Q ss_pred cEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccc
Q 004157 100 ITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (771)
Q Consensus 100 ~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~ 178 (771)
..+|+|||++ ++|.+++..... ......+..++.|++.||.|||+ .+++||||+|+||+++.+|.+||+|||++..
T Consensus 71 ~~~~~v~e~~~~~l~~~i~~~~~--~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~ 147 (282)
T cd07829 71 RKLYLVFEYCDMDLKKYLDKRPG--PLSPNLIKSIMYQLLRGLAYCHS-HRILHRDLKPQNILINRDGVLKLADFGLARA 147 (282)
T ss_pred CceEEEecCcCcCHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCChheEEEcCCCCEEEecCCcccc
Confidence 3899999999 679998887631 12344466679999999999996 8999999999999999999999999999877
Q ss_pred cCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh------------
Q 004157 179 FDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------------ 246 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l------------ 246 (771)
....... .........|+|||.+.+. ..++.++|+|+|||++||+++|.++|.....
T Consensus 148 ~~~~~~~------~~~~~~~~~~~aPE~~~~~-----~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 216 (282)
T cd07829 148 FGIPLRT------YTHEVVTLWYRAPEILLGS-----KHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILG 216 (282)
T ss_pred cCCCccc------cCccccCcCcCChHHhcCC-----cCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhC
Confidence 6442110 0111234479999998653 2566789999999999999999888753210
Q ss_pred -----------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 247 -----------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 247 -----------------------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
.....++..+.+++.+||..+|++||++.+++.|+|
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~ 281 (282)
T cd07829 217 TPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPY 281 (282)
T ss_pred CCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcC
Confidence 011234667899999999999999999999999854
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.1e-30 Score=279.42 Aligned_cols=248 Identities=19% Similarity=0.299 Sum_probs=191.3
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccCc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d~ 95 (771)
..+|++.+.||.|+ | .||+|.++.+|+.|+||++............+.+|+..++++ +||||+++++++...+
T Consensus 6 ~~~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~--- 80 (337)
T cd07852 6 LRKYEILQKLGKGAYG--IVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAEN--- 80 (337)
T ss_pred hhHHHHhHhhcCCCCe--eEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCC---
Confidence 45799999999998 8 899999998999999999875433333445677899999999 9999999999987543
Q ss_pred CCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 96 ~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
...+|+||||+ ++|..++..... ......+++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||
T Consensus 81 ---~~~~~lv~e~~~~~L~~~~~~~~~----~~~~~~~i~~qi~~~L~~LH~-~~i~H~dl~p~nill~~~~~~kl~d~g 152 (337)
T cd07852 81 ---DKDIYLVFEYMETDLHAVIRANIL----EDVHKRYIMYQLLKALKYIHS-GNVIHRDLKPSNILLNSDCRVKLADFG 152 (337)
T ss_pred ---CceEEEEecccccCHHHHHhcCCC----CHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEEcCCCcEEEeecc
Confidence 34789999999 678888776422 233355669999999999996 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh--------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------- 246 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-------- 246 (771)
++............+. .........|+|||++.+. ...+.++|+|||||++|+|++|.++|.....
T Consensus 153 ~~~~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~-----~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~ 226 (337)
T cd07852 153 LARSLSELEENPENPV-LTDYVATRWYRAPEILLGS-----TRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKII 226 (337)
T ss_pred chhccccccccccCcc-hhcccccccccCceeeecc-----ccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence 9986644221110011 1122344579999987542 3456789999999999999999987742110
Q ss_pred -----------------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 247 -----------------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 247 -----------------------------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
.....++..+.+++.+||+.+|.+||++.++++| .||+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~-~~~~ 299 (337)
T cd07852 227 EVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH-PYVA 299 (337)
T ss_pred HHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC-hhhh
Confidence 0012357778999999999999999999999998 4443
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=265.42 Aligned_cols=236 Identities=20% Similarity=0.271 Sum_probs=188.4
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc---hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ---DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~---~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
+|+.++.||.|+ | +||+|+++.+++.|+||.+...... ....+.+.+|+..++.++||||+++++.++..
T Consensus 1 ~~~~~~~ig~g~~~--~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~---- 74 (258)
T cd06632 1 RWRKGELLGSGSFG--SVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREE---- 74 (258)
T ss_pred CccccceeeecCCc--eEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecC----
Confidence 488889999998 8 9999999999999999998764322 23566788999999999999999999998763
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+|+|+||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+||
T Consensus 75 ----~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~~~ni~~~~~~~~kl~d~ 146 (258)
T cd06632 75 ----DNLYIFLELVPGGSLAKLLKKYGS---FPEPVIRLYTRQILLGLEYLHD-RNTVHRDIKGANILVDTNGVVKLADF 146 (258)
T ss_pred ----CeEEEEEEecCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECCCCCEEEccC
Confidence 4889999999 479988876542 2234456669999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------- 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l------- 246 (771)
|++........ .........|++||..... ..++.++|+|||||++|++++|..||.....
T Consensus 147 ~~~~~~~~~~~-------~~~~~~~~~y~~pe~~~~~-----~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~ 214 (258)
T cd06632 147 GMAKQVVEFSF-------AKSFKGSPYWMAPEVIAQQ-----GGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKI 214 (258)
T ss_pred ccceecccccc-------ccccCCCcceeCHHHhcCC-----CCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHH
Confidence 99876543210 1112234479999997652 1267889999999999999999988743210
Q ss_pred ---hcc----CCCCcchHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 247 ---RNT----ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 247 ---~~~----~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
... ..++..+.+++.+||+.+|.+||++.+++.|+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~ 256 (258)
T cd06632 215 GRSKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHP 256 (258)
T ss_pred HhcccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCC
Confidence 011 23456788899999999999999999999984
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=270.60 Aligned_cols=241 Identities=17% Similarity=0.159 Sum_probs=193.5
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
..+|++.+.||.|. | +||++.+..+|+.|++|++.... .......+.+|+++++.++||||+++++.+...
T Consensus 4 ~~~~~~~~~ig~g~~g--~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----- 75 (284)
T cd06620 4 NEDLETISDLGAGNGG--SVSKVKHIPTGTVMAKKVVHIGA-KSSVRKQILRELQIMHECRSPYIVSFYGAFLNE----- 75 (284)
T ss_pred HHHHHHHHHcCCCCCe--EEEEEEEcCCCcEEEEEEEEecC-cchHHHHHHHHHHHHHHcCCCCcceEeeeEecC-----
Confidence 45699999999998 7 99999999999999999987543 233466788999999999999999999999864
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+|+||||+ ++|.+++...+. .....+..++.|++.+|.|||+..+++||||+|+||+++.++.++|+|||
T Consensus 76 ---~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~g 149 (284)
T cd06620 76 ---NNICMCMEFMDCGSLDRIYKKGGP---IPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFG 149 (284)
T ss_pred ---CEEEEEEecCCCCCHHHHHHhccC---CCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCC
Confidence 4899999999 478888876432 23455667799999999999965689999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh--------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------- 246 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-------- 246 (771)
++........ .....+..|+|||++.+ ..++.++|+|||||++|++++|..||.....
T Consensus 150 l~~~~~~~~~--------~~~~~~~~~~aPE~~~~------~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~ 215 (284)
T cd06620 150 VSGELINSIA--------DTFVGTSTYMSPERIQG------GKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDP 215 (284)
T ss_pred cccchhhhcc--------CccccCcccCCHHHHcc------CCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhh
Confidence 9865432110 01234458999999865 3566789999999999999999988753211
Q ss_pred -------hc----------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 247 -------RN----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 247 -------~~----------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
.. ...+|..+.+++.+|+..+|.+||++.+++++.+|.+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~ 272 (284)
T cd06620 216 MGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQA 272 (284)
T ss_pred hHHHHHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 00 01266778999999999999999999999998655543
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.3e-30 Score=273.52 Aligned_cols=239 Identities=17% Similarity=0.235 Sum_probs=191.1
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
...+|++.+.+|.|. | +||+|.++.++..|+||.+..... ...+.+.+|+.+++.++||||+++++.+...
T Consensus 17 ~~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~---- 88 (293)
T cd06647 17 PKKKYTRFEKIGQGASG--TVYTAIDVATGQEVAIKQMNLQQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVG---- 88 (293)
T ss_pred chhhceeeeEecCCCCe--EEEEEEEcCCCCEEEEEEeccccc--hHHHHHHHHHHHHhhcCCCCeeehhheeeeC----
Confidence 456899999999998 7 999999998999999999875322 2346678999999999999999999999863
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
...|+|+||+ ++|.+++.+... ....+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+||
T Consensus 89 ----~~~~lv~e~~~~~~L~~~~~~~~l----~~~~~~~i~~~l~~al~~LH~-~gi~H~dL~p~Nili~~~~~~kL~df 159 (293)
T cd06647 89 ----DELWVVMEYLAGGSLTDVVTETCM----DEGQIAAVCRECLQALEFLHS-NQVIHRDIKSDNILLGMDGSVKLTDF 159 (293)
T ss_pred ----CcEEEEEecCCCCcHHHHHhhcCC----CHHHHHHHHHHHHHHHHHHHh-CCEeeccCCHHHEEEcCCCCEEEccC
Confidence 3789999999 579888876533 233456779999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h--
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R-- 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~-- 247 (771)
|++......... .........|++||.+.. ..++.++|+|||||++|++++|..||..... .
T Consensus 160 g~~~~~~~~~~~------~~~~~~~~~y~~PE~~~~------~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~ 227 (293)
T cd06647 160 GFCAQITPEQSK------RSTMVGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI 227 (293)
T ss_pred cceecccccccc------cccccCChhhcCchhhcc------CCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeeh
Confidence 998765432110 111223447999999865 3456789999999999999999988854321 0
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 ---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 ---------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
....++..+.+++.+||..+|.+||++.+++.| .||+
T Consensus 228 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h-~~~~ 273 (293)
T cd06647 228 ATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH-PFLK 273 (293)
T ss_pred hcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC-HHHh
Confidence 012345668899999999999999999999998 4553
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-29 Score=276.44 Aligned_cols=238 Identities=18% Similarity=0.276 Sum_probs=190.0
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
..+|++.+.||.|. | .||+|.++.+|+.|+||++.+........+.+.+|+++++.++||||+++++++...
T Consensus 9 ~~~y~~~~~ig~g~~g--~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~----- 81 (328)
T cd07856 9 TNRYVDLQPVGMGAFG--LVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISP----- 81 (328)
T ss_pred ccceEEEEeecccCCe--EEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecC-----
Confidence 45799999999998 8 999999999999999999876544444456778899999999999999999998753
Q ss_pred CcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 97 ~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
....|+|+||+ +.|..+++.... ....+.+++.||++||.|||+ .+++||||+|.||+++.+|.+||+|||+
T Consensus 82 --~~~~~lv~e~~~~~L~~~~~~~~~----~~~~~~~~~~ql~~aL~~LH~-~~iiH~dl~p~Nili~~~~~~~l~dfg~ 154 (328)
T cd07856 82 --LEDIYFVTELLGTDLHRLLTSRPL----EKQFIQYFLYQILRGLKYVHS-AGVVHRDLKPSNILINENCDLKICDFGL 154 (328)
T ss_pred --CCcEEEEeehhccCHHHHHhcCCC----CHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEeECCCCCEEeCcccc
Confidence 23689999999 467777765432 234466779999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh---------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--------- 246 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l--------- 246 (771)
+....... ........|++||++.+. ..++.++|+|||||++|+|++|.++|.....
T Consensus 155 ~~~~~~~~---------~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~ 220 (328)
T cd07856 155 ARIQDPQM---------TGYVSTRYYRAPEIMLTW-----QKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITD 220 (328)
T ss_pred ccccCCCc---------CCCcccccccCceeeecc-----CCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 87543211 112334579999987542 3466889999999999999999988743210
Q ss_pred ----------------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 247 ----------------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 247 ----------------------------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
.....++..+.+++++||..+|.+||++.+++.| +||
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~-~~~ 291 (328)
T cd07856 221 LLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH-PYL 291 (328)
T ss_pred HhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC-Ccc
Confidence 0012356778999999999999999999999998 455
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.2e-30 Score=283.61 Aligned_cols=241 Identities=16% Similarity=0.194 Sum_probs=183.3
Q ss_pred CCCceecCCCCCCC-CceEEEEeEE-----CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEe
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTS-----KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEV 90 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~-----k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~ 90 (771)
..+|++++.||.|+ | +||+|++ ..++..|+||++...... ...+.+.+|+++|+.+ +||||+++++++..
T Consensus 34 ~~~~~~~~~LG~G~fG--~V~~~~~~~~~~~~~~~~vavK~l~~~~~~-~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~ 110 (375)
T cd05104 34 RNRLSFGKTLGAGAFG--KVVEATAYGLFKSDAAMTVAVKMLKPSAHL-TEREALMSELKVLSYLGNHINIVNLLGACTV 110 (375)
T ss_pred hHHeehhheecCCccc--eEEEEEEeccccCccceeEEEEeccCCcCc-HHHHHHHHHHHHHHHhcCCcceeeeeeeecc
Confidence 34699999999999 8 9999974 345678999998754322 3456788999999999 89999999999976
Q ss_pred cccCcCCcccEEEEEecCC--cchHHHHHHhCCC----------------------------------------------
Q 004157 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLE---------------------------------------------- 122 (771)
Q Consensus 91 e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~---------------------------------------------- 122 (771)
. ...|+||||| ++|.+++......
T Consensus 111 ~--------~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 182 (375)
T cd05104 111 G--------GPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTK 182 (375)
T ss_pred C--------CcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccc
Confidence 3 3789999999 6898888653210
Q ss_pred --------------------------CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 123 --------------------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 123 --------------------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
.......+..+++||+.||.|||+ .+++||||||+||+++.++.+||+|||++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~-~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 261 (375)
T cd05104 183 ADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLAS-KNCIHRDLAARNILLTHGRITKICDFGLA 261 (375)
T ss_pred cccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH-CCeeccCCchhhEEEECCCcEEEecCccc
Confidence 001123345568999999999996 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhh--------hh
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE--------LR 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~--------l~ 247 (771)
......... ........+..|+|||++.+ ..++.++|+|||||++|||++ |..||.... +.
T Consensus 262 ~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~------~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~ 331 (375)
T cd05104 262 RDIRNDSNY----VVKGNARLPVKWMAPESIFN------CVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIK 331 (375)
T ss_pred eeccCcccc----cccCCCCCCcceeChhHhcC------CCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHH
Confidence 866432110 00001122346999999876 356789999999999999998 666664311 01
Q ss_pred ------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 ------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 ------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....|..+.+++.+||+.+|++||++.++++.
T Consensus 332 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 332 EGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred hCccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 012356789999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.1e-30 Score=278.70 Aligned_cols=249 Identities=22% Similarity=0.324 Sum_probs=194.9
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.||.|+ | .||+|++..+|+.|+||++..........+.+.+|+.+++.++||||+++++++..... .+
T Consensus 1 ~y~i~~~ig~g~~~--~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~---~~ 75 (330)
T cd07834 1 RYELLKPIGSGAYG--VVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSP---ED 75 (330)
T ss_pred CceeeeeecCCCCe--EEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCc---cc
Confidence 599999999998 8 99999999899999999998654334456678899999999999999999999876421 11
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
...+|+||||+ .+|.+++.... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.++|+|||++.
T Consensus 76 ~~~~~lv~e~~~~~l~~~l~~~~---~l~~~~~~~i~~~l~~~l~~LH~-~gi~H~dlkp~nili~~~~~~~L~dfg~~~ 151 (330)
T cd07834 76 FNDVYIVTELMETDLHKVIKSPQ---PLTDDHIQYFLYQILRGLKYLHS-ANVIHRDLKPSNILVNSNCDLKICDFGLAR 151 (330)
T ss_pred ccceEEEecchhhhHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCCCEEEcccCceE
Confidence 34789999999 46888876643 22344566679999999999996 899999999999999999999999999998
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh----------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---------- 247 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~---------- 247 (771)
........ ............|+|||++.+. ..++.++|+|||||++|+|++|.++|......
T Consensus 152 ~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~ 223 (330)
T cd07834 152 GVDPDEDE---KGFLTEYVVTRWYRAPELLLSS-----SRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVL 223 (330)
T ss_pred eecccccc---cccccccccccCcCCceeeecc-----cCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhc
Confidence 76543210 0001122334579999998763 25678999999999999999999887432100
Q ss_pred ---------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 ---------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 ---------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....+|..+.+++.+||+.+|.+||++.+++.| +||++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~-~~~~~ 294 (330)
T cd07834 224 GTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH-PYLAQ 294 (330)
T ss_pred CCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhC-ccHHh
Confidence 012356778899999999999999999999998 45543
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-29 Score=268.01 Aligned_cols=242 Identities=18% Similarity=0.264 Sum_probs=186.4
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC---CCCCeeEEeeeEEecccCcC
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV---RHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L---rHPnIlkv~d~~e~e~~d~~ 96 (771)
|++.+.+|.|. | .||+|+++.+++.|+||++......+.....+.+|+..++++ +||||+++++++......
T Consensus 1 y~~~~~l~~g~~~--~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~-- 76 (287)
T cd07838 1 YEELAEIGEGAYG--TVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTD-- 76 (287)
T ss_pred CeEEEEecccCce--EEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCC--
Confidence 78889999998 8 999999998999999999986544443445566787777666 599999999999864421
Q ss_pred CcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 97 ~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
....+|++||++ +.|.+++...... ......+..++.||+.||.|||+ .+++|+||+|+||+++.++.+||+|||+
T Consensus 77 -~~~~~~l~~e~~~~~l~~~l~~~~~~-~l~~~~~~~~~~~i~~al~~LH~-~~i~h~~l~~~nili~~~~~~~l~dfg~ 153 (287)
T cd07838 77 -RELKLTLVFEHVDQDLATYLSKCPKP-GLPPETIKDLMRQLLRGVDFLHS-HRIVHRDLKPQNILVTSDGQVKIADFGL 153 (287)
T ss_pred -CCceeEEEehhcccCHHHHHHHccCC-CCCHHHHHHHHHHHHHHHHHHHH-CCeeeccCChhhEEEccCCCEEEeccCc
Confidence 023599999999 5788888764321 22345567779999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh--------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~-------- 247 (771)
+........ .........|+|||++.+ ..++.++|+|||||++|+|++|.+++......
T Consensus 154 ~~~~~~~~~-------~~~~~~~~~~~~PE~~~~------~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~ 220 (287)
T cd07838 154 ARIYSFEMA-------LTSVVVTLWYRAPEVLLQ------SSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFD 220 (287)
T ss_pred ceeccCCcc-------cccccccccccChHHhcc------CCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHH
Confidence 877643211 011123457999999876 34667899999999999999998877532100
Q ss_pred -------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 248 -------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 248 -------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
....++..+.+++++||+.+|.+||++.+++.|++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~ 286 (287)
T cd07838 221 VIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPY 286 (287)
T ss_pred HcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcC
Confidence 00124456778899999999999999999999854
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5e-30 Score=272.18 Aligned_cols=233 Identities=17% Similarity=0.221 Sum_probs=187.1
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
-|++.+.||.|. | .||+|.+..++..|+||.+...... ...+.+.+|++++++++||||+++++.+...
T Consensus 5 ~y~~~~~l~~g~~~--~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------- 74 (277)
T cd06642 5 LFTKLERIGKGSFG--EVYKGIDNRTKEVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYITRYYGSYLKG------- 74 (277)
T ss_pred HHHHHHHhcCCCCe--eEEEEEEcCCCeEEEEEEeccccch-HHHHHHHHHHHHHHcCCCCccHhhhcccccC-------
Confidence 377888899987 7 9999999999999999998755333 3456789999999999999999999999863
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+|+||||+ ++|.+++.... .....+...+.||+.||.|||+ .+++|+||+|+||+++.+|.+||+|||++
T Consensus 75 -~~~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~i~~~l~~lH~-~~ivH~dl~p~ni~i~~~~~~~l~dfg~~ 148 (277)
T cd06642 75 -TKLWIIMEYLGGGSALDLLKPGP----LEETYIATILREILKGLDYLHS-ERKIHRDIKAANVLLSEQGDVKLADFGVA 148 (277)
T ss_pred -CceEEEEEccCCCcHHHHhhcCC----CCHHHHHHHHHHHHHHHHHHhc-CCeeccCCChheEEEeCCCCEEEcccccc
Confidence 4899999999 46888876533 2344566779999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh---------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--------- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~--------- 247 (771)
........ ..........|+|||++.+ ..++.++|+|||||++||+++|..|+......
T Consensus 149 ~~~~~~~~------~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~ 216 (277)
T cd06642 149 GQLTDTQI------KRNTFVGTPFWMAPEVIKQ------SAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKN 216 (277)
T ss_pred ccccCcch------hhhcccCcccccCHHHhCc------CCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcC
Confidence 76543211 0111223447999999876 35667899999999999999999886432100
Q ss_pred ----ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 ----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 ----~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
....++..+.+++.+|+..+|.+||++.++++|
T Consensus 217 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 217 SPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred CCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 012356678999999999999999999999998
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-29 Score=272.43 Aligned_cols=245 Identities=16% Similarity=0.195 Sum_probs=188.6
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.|++.+.++.|. | .||++.++.+++.|+||.+...... ......+.+|+++++.++||||+++++.++.+
T Consensus 2 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------ 73 (305)
T cd05609 2 DFETIKLISNGAYG--AVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETK------ 73 (305)
T ss_pred CceEeeEeecCCCe--eEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecC------
Confidence 589999999998 8 8999999999999999998865322 23456778899999999999999999998763
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
.++|+||||+ ++|.++++.... .....+..++.|++.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~e~~~g~~L~~~l~~~~~---~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~NIll~~~~~~~l~dfg~ 147 (305)
T cd05609 74 --RHLCMVMEYVEGGDCATLLKNIGA---LPVDMARMYFAETVLALEYLHN-YGIVHRDLKPDNLLITSMGHIKLTDFGL 147 (305)
T ss_pred --CEEEEEEecCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCccccCCchHHEEECCCCCEEEeeCCC
Confidence 4899999999 479999876542 2334455668999999999996 8999999999999999999999999998
Q ss_pred ccccCCCCCCC---------CCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh
Q 004157 176 LSEFDGNNEAA---------NGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL 246 (771)
Q Consensus 176 a~~~~~~~~~~---------~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l 246 (771)
+.......... ..............|+|||.+.+ ..++.++|+|||||++||+++|..||.....
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~vl~el~~g~~pf~~~~~ 221 (305)
T cd05609 148 SKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILR------QGYGKPVDWWAMGIILYEFLVGCVPFFGDTP 221 (305)
T ss_pred ccccCcCccccccccccccchhhccccCCccCccccCchhccC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 76321110000 00000011223447999999765 3567889999999999999999988753221
Q ss_pred h---------------ccCCCCcchHHHHHHHhccCCCCCCC---hHHHhhCCCCCc
Q 004157 247 R---------------NTASIPKSLLPDYQRLLSSMPSRRLN---SSKLIENSEYFQ 285 (771)
Q Consensus 247 ~---------------~~~~IP~~l~~~i~~lL~~~P~~Rps---~~~lL~~~~fF~ 285 (771)
. ....+|..+.+++.+||+.+|.+||+ +.++++| +||.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~-~~~~ 277 (305)
T cd05609 222 EELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH-RFFL 277 (305)
T ss_pred HHHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC-cccc
Confidence 1 01246777999999999999999998 6888888 5553
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-29 Score=268.29 Aligned_cols=250 Identities=15% Similarity=0.212 Sum_probs=190.9
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccC
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENID 94 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d 94 (771)
+...|++.+.+|.|+ | +||+|.++.+++.|++|++.... .....+.+|+..++++ +||||+++++++......
T Consensus 14 ~~~~~~~~~~lg~g~~~--~v~~~~~~~~~~~~a~K~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~ 88 (282)
T cd06636 14 PAGIFELVEVVGNGTYG--QVYKGRHVKTGQLAAIKVMDVTE---DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPP 88 (282)
T ss_pred hhhhhhhheeeccCCCe--EEEEEEEcCCCcEEEEEEEecCh---HHHHHHHHHHHHHHHhcCCCcEEEEeeehhccccc
Confidence 345799999999997 6 99999999999999999987542 2335678899999998 699999999998542110
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
.....+|++|||+ ++|.+++...... ......+..++.||+.||.|||+ .+++|+||+|+||+++.+|.+||+|
T Consensus 89 --~~~~~~~iv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~qi~~al~~LH~-~~ivH~dl~~~nili~~~~~~~l~d 164 (282)
T cd06636 89 --GHDDQLWLVMEFCGAGSVTDLVKNTKGN-ALKEDWIAYICREILRGLAHLHA-HKVIHRDIKGQNVLLTENAEVKLVD 164 (282)
T ss_pred --CCCCEEEEEEEeCCCCcHHHHHHHccCC-CCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECCCCCEEEee
Confidence 1135899999999 4788888764321 23355567779999999999996 8999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-hh----
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-LR---- 247 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-l~---- 247 (771)
||++......... .....+...|+|||.+...-. ....++.++|+|||||++|+|++|..||.... ..
T Consensus 165 fg~~~~~~~~~~~------~~~~~~~~~y~aPE~l~~~~~-~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~ 237 (282)
T cd06636 165 FGVSAQLDRTVGR------RNTFIGTPYWMAPEVIACDEN-PDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFL 237 (282)
T ss_pred CcchhhhhccccC------CCcccccccccCHhhcCcccC-cCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhh
Confidence 9998765431110 111234458999998753210 11345678999999999999999998874321 11
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 248 ---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 248 ---------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
....+|..+.+++.+||+.+|.+||++.++++|+|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~ 281 (282)
T cd06636 238 IPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPF 281 (282)
T ss_pred HhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCC
Confidence 01246778999999999999999999999999844
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-29 Score=268.45 Aligned_cols=241 Identities=16% Similarity=0.168 Sum_probs=186.8
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECC-----CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEec
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKD-----DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~-----~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e 91 (771)
...|++.+.+|.|+ | .||+|+.+. ++..|+||++...... ...+.+++|+++|++++||||++++++++..
T Consensus 4 ~~~~~~~~~lg~g~~~--~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 80 (280)
T cd05049 4 RDTIVLKRELGEGAFG--KVFLGECYHLEPENDKELVAVKTLKETASN-DARKDFEREAELLTNFQHENIVKFYGVCTEG 80 (280)
T ss_pred hHHhhHHhhccccCCc--eEeeeeeccccCcCCcceEEEEeecccCCH-HHHHHHHHHHHHHHhcCCCCchheeeEEecC
Confidence 34599999999998 8 899998753 3678999998754332 3456789999999999999999999999864
Q ss_pred ccCcCCcccEEEEEecCC--cchHHHHHHhCC-----------CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCC
Q 004157 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGL-----------EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLS 158 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~-----------~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~ 158 (771)
...|+||||+ ++|.++|...+. ........+..++.||+.||.|||+ .+++||||||+
T Consensus 81 --------~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~-~~i~h~dlkp~ 151 (280)
T cd05049 81 --------DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLAS-QHFVHRDLATR 151 (280)
T ss_pred --------CCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhh-CCeeccccccc
Confidence 3789999999 579999976532 1112233466679999999999996 89999999999
Q ss_pred CEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-C
Q 004157 159 SVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-G 237 (771)
Q Consensus 159 NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g 237 (771)
||+++.++.+||+|||++........... ......+..|+|||++.+ ..++.++|+|||||++|||++ |
T Consensus 152 nili~~~~~~kl~d~g~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~e~~~~g 221 (280)
T cd05049 152 NCLVGYDLVVKIGDFGMSRDVYTTDYYRV----GGHTMLPIRWMPPESIMY------RKFTTESDVWSFGVVLWEIFTYG 221 (280)
T ss_pred eEEEcCCCeEEECCcccceecccCcceec----CCCCcccceecChhhhcc------CCcchhhhHHHHHHHHHHHHhcC
Confidence 99999999999999999876533211000 011122357999999876 356788999999999999998 8
Q ss_pred CCCCChhhh-------h------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 238 MRLSKTEEL-------R------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 238 ~~p~~~~~l-------~------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
..||..... . ....+|..+.+++.+||..+|.+||++.++++.
T Consensus 222 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 277 (280)
T cd05049 222 KQPWYGLSNEEVIECITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHER 277 (280)
T ss_pred CCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 877632111 0 113467789999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-29 Score=268.01 Aligned_cols=242 Identities=17% Similarity=0.167 Sum_probs=189.8
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+++|.|. | .||.|.++.+++.|++|.+...... .....+.+|++++++++||||+++++++..+.
T Consensus 2 ~~~~~~~lg~g~~~--~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~------ 72 (287)
T cd06621 2 KIVELSRLGEGAGG--SVTKCRLKNTGMIFALKTITTDPNP-DLQKQILRELEINKSCKSPYIVKYYGAFLDES------ 72 (287)
T ss_pred ceEEEEEeccCCce--EEEEEEECCCCeEEEEEEEecCCch-HHHHHHHHHHHHHHhCCCCCeeeeeeEEEccC------
Confidence 588889999998 8 9999999999999999999864332 34567889999999999999999999986544
Q ss_pred ccEEEEEecCC--cchHHHHHHhCC-CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
...+|+||||+ ++|.+++..... ........+..++.||+.||.|||+ .+++|+||+|+||+++.++.+||+|||+
T Consensus 73 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~-~~i~H~dl~~~nil~~~~~~~~l~dfg~ 151 (287)
T cd06621 73 SSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHS-RKIIHRDIKPSNILLTRKGQVKLCDFGV 151 (287)
T ss_pred CCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEEecCCeEEEeeccc
Confidence 34789999999 478887765321 2223344567779999999999996 9999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh---------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--------- 246 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l--------- 246 (771)
+........ ........|++||...+ ..++.++|+|+|||++|+|++|..|+.....
T Consensus 152 ~~~~~~~~~--------~~~~~~~~y~~pE~~~~------~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 217 (287)
T cd06621 152 SGELVNSLA--------GTFTGTSFYMAPERIQG------KPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELL 217 (287)
T ss_pred ccccccccc--------ccccCCccccCHHHhcC------CCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHH
Confidence 875543111 01123447999998865 3567789999999999999999988754310
Q ss_pred h---c-----c-------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 247 R---N-----T-------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 247 ~---~-----~-------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
. . + ...++.+.+++.+||..+|.+||++.++++|+ ||.+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~-~~~~ 271 (287)
T cd06621 218 SYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHP-WIKA 271 (287)
T ss_pred HHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCc-cccc
Confidence 0 0 0 11234678999999999999999999999994 4444
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-29 Score=258.96 Aligned_cols=234 Identities=17% Similarity=0.267 Sum_probs=189.8
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|++.+.+|.|. | .||++.++.+++.|++|++..... .....+.+|++.++.++||||+++++.+..+
T Consensus 1 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 69 (253)
T cd05122 1 LFEILEKIGKGGFG--EVYKARHKRTGKEVAIKVIKLESK--EKKEKIINEIQILKKCKHPNIVKYYGSYLKK------- 69 (253)
T ss_pred CceeeeeeccCCce--EEEEEEECCCCcEEEEEEecccch--hHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-------
Confidence 388899999987 7 999999999999999999986433 3456788999999999999999999999864
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
...|+++||+ ++|.+++.... .......+.+++.|++.||.|||+ .+++||||+|+||+++.+|.+||+|||++
T Consensus 70 -~~~~l~~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~-~~i~h~dl~p~ni~i~~~~~~~l~d~~~~ 145 (253)
T cd05122 70 -DELWIVMEFCSGGSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLHS-NGIIHRDIKAANILLTSDGEVKLIDFGLS 145 (253)
T ss_pred -CeEEEEEecCCCCcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhc-CCEecCCCCHHHEEEccCCeEEEeecccc
Confidence 3789999999 47888887653 122345577789999999999996 99999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh---------h
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL---------R 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l---------~ 247 (771)
........ .........|+|||...+. .++.++|+|+|||++|++++|..|+..... .
T Consensus 146 ~~~~~~~~-------~~~~~~~~~~~~PE~~~~~------~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 212 (253)
T cd05122 146 AQLSDTKA-------RNTMVGTPYWMAPEVINGK------PYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATN 212 (253)
T ss_pred cccccccc-------ccceecCCcccCHHHHcCC------CCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhc
Confidence 77654211 1112234489999998763 466789999999999999999988754310 0
Q ss_pred ------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 248 ------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 248 ------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
....++..+.+++.+||+.+|++||++.++++|+
T Consensus 213 ~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~ 252 (253)
T cd05122 213 GPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHP 252 (253)
T ss_pred CCCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhcCC
Confidence 0112367789999999999999999999999984
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-29 Score=266.21 Aligned_cols=238 Identities=18% Similarity=0.230 Sum_probs=187.3
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
+|++.+.||.|. | .||+|.++.+|+.|+||.+..... .......+.+|+++++.++||||+++++++..+
T Consensus 3 ~y~~~~~ig~g~~g--~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~------ 74 (267)
T cd08229 3 NFRIEKKIGRGQFS--EVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIED------ 74 (267)
T ss_pred hhhhhhhhcccCCe--EEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeC------
Confidence 589999999998 8 899999999999999998875432 223456788999999999999999999999863
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCC-CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLE-GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~-~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+|++|||+ ++|.++++..... .......+..++.||+.||.|||+ .+++|+||+|+||+++.+|.++|+|||
T Consensus 75 --~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~dl~p~nili~~~~~~~l~dfg 151 (267)
T cd08229 75 --NELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHS-RRVMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred --CeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEEcCCCCEEECcch
Confidence 3889999999 4798888753321 222344456679999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh------hc
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------RN 248 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l------~~ 248 (771)
++......... .........|+|||...+ ..++.++|+|||||++|+|++|..|+..... ..
T Consensus 152 ~~~~~~~~~~~------~~~~~~~~~~~ape~~~~------~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 219 (267)
T cd08229 152 LGRFFSSKTTA------AHSLVGTPYYMSPERIHE------NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKK 219 (267)
T ss_pred hhhccccCCcc------cccccCCcCccCHHHhcC------CCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhh
Confidence 98765432110 111233457999999865 3566789999999999999999988743211 00
Q ss_pred ----------cCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 249 ----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 249 ----------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
...++..+.+++.+|+..+|.+||++.++++.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~ 261 (267)
T cd08229 220 IEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDV 261 (267)
T ss_pred hhcCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHH
Confidence 12355678999999999999999999987753
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-29 Score=277.63 Aligned_cols=244 Identities=15% Similarity=0.247 Sum_probs=191.4
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.+|++.+.||.|. | +||.|.++.+|..|+||++......+.....+.+|+++|+.++||||++++++++.+... .
T Consensus 15 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~--~ 90 (343)
T cd07880 15 DRYRDLKQVGSGAYG--TVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSL--D 90 (343)
T ss_pred cceEEEEEeeecCCe--EEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccc--c
Confidence 4699999999998 8 999999999999999999976544444456788999999999999999999998754311 0
Q ss_pred cccEEEEEecCCc-chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
....+|+|||+++ +|..++.... .....+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||++
T Consensus 91 ~~~~~~lv~e~~~~~l~~~~~~~~----l~~~~~~~i~~qi~~al~~LH~-~gi~H~dlkp~Nill~~~~~~kl~dfg~~ 165 (343)
T cd07880 91 RFHDFYLVMPFMGTDLGKLMKHEK----LSEDRIQFLVYQMLKGLKYIHA-AGIIHRDLKPGNLAVNEDCELKILDFGLA 165 (343)
T ss_pred ccceEEEEEecCCCCHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCCCEEEeecccc
Confidence 0235799999994 6777776433 2345567779999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h-----
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R----- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~----- 247 (771)
....... ........|++||++.+. ..++.++|+|||||++|++++|.+||..... .
T Consensus 166 ~~~~~~~---------~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~ 231 (343)
T cd07880 166 RQTDSEM---------TGYVVTRWYRAPEVILNW-----MHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKV 231 (343)
T ss_pred cccccCc---------cccccCCcccCHHHHhCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 7654311 112234579999998642 2356789999999999999999988753210 0
Q ss_pred ----------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 ----------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 ----------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||+.+|.+||++.+++.| +||+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~-~~~~~ 303 (343)
T cd07880 232 TGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH-PYFEE 303 (343)
T ss_pred cCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC-ccHhh
Confidence 002355668899999999999999999999988 55543
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-29 Score=278.02 Aligned_cols=242 Identities=17% Similarity=0.267 Sum_probs=187.4
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.+|.+.+.||.|+ | .||+|+++.+|+.|+||++.+....+.....+.+|+++++.++||||++++++++..... .
T Consensus 15 ~~y~~~~~ig~g~~g--~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~--~ 90 (342)
T cd07879 15 ERYTSLKQVGSGAYG--SVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSG--D 90 (342)
T ss_pred cceEEEEEeeecCCe--EEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccC--C
Confidence 5799999999987 7 999999999999999999976544444455678899999999999999999998753210 0
Q ss_pred cccEEEEEecCCc-chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
....+|+|+||+. .|..++. .. .....+.+++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||++
T Consensus 91 ~~~~~~lv~e~~~~~l~~~~~-~~----~~~~~~~~~~~qi~~aL~~LH~-~~i~H~dlkp~NIll~~~~~~kL~dfg~~ 164 (342)
T cd07879 91 EFQDFYLVMPYMQTDLQKIMG-HP----LSEDKVQYLVYQMLCGLKYIHS-AGIIHRDLKPGNLAVNEDCELKILDFGLA 164 (342)
T ss_pred CCceEEEEecccccCHHHHHc-CC----CCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECCCCCEEEeeCCCC
Confidence 1236799999994 4554432 11 2345577789999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh---------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--------- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~--------- 247 (771)
....... ........|+|||++.+. ..++.++|+|||||++|||++|..+|......
T Consensus 165 ~~~~~~~---------~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~ 230 (342)
T cd07879 165 RHADAEM---------TGYVVTRWYRAPEVILNW-----MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKV 230 (342)
T ss_pred cCCCCCC---------CCceeeecccChhhhcCc-----cccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 7653211 112334579999997652 24567899999999999999999887542200
Q ss_pred ----------------------c------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 ----------------------N------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 ----------------------~------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
. ...++..+.+++.+||+.+|.+||++.+++.| +||.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h-~~f~ 301 (342)
T cd07879 231 TGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEH-PYFD 301 (342)
T ss_pred cCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcC-cchh
Confidence 0 01345568899999999999999999999998 4553
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-29 Score=267.65 Aligned_cols=240 Identities=17% Similarity=0.224 Sum_probs=184.2
Q ss_pred CCceecCCCCCCC-CceEEEEeEE----CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTS----KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~----k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
..|++.+.||.|+ | +||+|+. ..++..|+||.+..... ......+.+|+.++++++||||+++++++...
T Consensus 5 ~~~~~~~~lg~g~~g--~vy~~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-- 79 (283)
T cd05090 5 SAVRFMEELGECAFG--KIYKGHLYLPGMDHAQLVAIKTLKDINN-PQQWGEFQQEASLMAELHHPNIVCLLGVVTQE-- 79 (283)
T ss_pred hhceeeeeccccCCc--ceEEEEEecCCCCCcceEEEEeccCCCC-HHHHHHHHHHHHHHhhCCCCCeeeEEEEEecC--
Confidence 3588999999998 8 8999985 34567899999875433 23456788999999999999999999998763
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCC--------------CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCC
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLE--------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCL 157 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~--------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp 157 (771)
...|+||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++||||||
T Consensus 80 ------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~-~~i~H~dlkp 152 (283)
T cd05090 80 ------QPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSS-HFFVHKDLAA 152 (283)
T ss_pred ------CceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHh-cCeehhcccc
Confidence 3789999999 5799888643210 111233455679999999999996 8999999999
Q ss_pred CCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-
Q 004157 158 SSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS- 236 (771)
Q Consensus 158 ~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~- 236 (771)
+||+++.++.+||+|||+++......... .......+..|+|||++.+ ..++.++|+|||||++|||++
T Consensus 153 ~nili~~~~~~kl~dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~el~~~ 222 (283)
T cd05090 153 RNILIGEQLHVKISDLGLSREIYSADYYR----VQPKSLLPIRWMPPEAIMY------GKFSSDSDIWSFGVVLWEIFSF 222 (283)
T ss_pred ceEEEcCCCcEEeccccccccccCCccee----cccCCCccceecChHHhcc------CCCCchhhhHHHHHHHHHHHcC
Confidence 99999999999999999998764321100 0111222346999999865 346779999999999999998
Q ss_pred CCCCCChhh---h----------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 237 GMRLSKTEE---L----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 237 g~~p~~~~~---l----------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
|..||.... . .....+|..+.+++.+|++.+|.+||++.+++++
T Consensus 223 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 223 GLQPYYGFSNQEVIEMVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred CCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 777764311 0 1123467789999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-29 Score=261.84 Aligned_cols=234 Identities=18% Similarity=0.225 Sum_probs=185.6
Q ss_pred CCCCCCC-CceEEEEeEECCC---CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCccc
Q 004157 25 DPYPSAW-GSWSHFQGTSKDD---GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKI 100 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~---g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~ 100 (771)
+.||.|+ | .||+|.+... +..|+||++....... ....+.+|++.++.++||||+++++++... .
T Consensus 1 ~~ig~g~~g--~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--------~ 69 (262)
T cd00192 1 KKLGEGAFG--EVYKGKLKGKDGKTTEVAVKTLKEDASEE-ERKDFLKEARVMKKLGHPNVVRLLGVCTEE--------E 69 (262)
T ss_pred CccccCCce--EEEEEEEecCCCCCceEEeEeeccccchh-HHHHHHHHHHHHhhcCCCChheeeeeecCC--------C
Confidence 3578887 7 9999999876 8999999998654433 467888999999999999999999999863 4
Q ss_pred EEEEEecCC--cchHHHHHHhCC------CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 101 TIYIVTEPV--MPLSEKIKELGL------EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 101 ~iyIVtE~v--~~L~~~L~~~~~------~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
.+|+||||+ ++|.+++..... ........+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+|
T Consensus 70 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~-~~i~H~di~p~nili~~~~~~~l~d 148 (262)
T cd00192 70 PLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS-KKFVHRDLAARNCLVGEDLVVKISD 148 (262)
T ss_pred ceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHc-CCcccCccCcceEEECCCCcEEEcc
Confidence 899999999 579999887521 1223455567779999999999996 9999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh-----
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL----- 246 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l----- 246 (771)
||.+......... ...........|+|||..... .++.++|+|||||++|+|++ |..|+.....
T Consensus 149 fg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~ 218 (262)
T cd00192 149 FGLSRDVYDDDYY----RKKTGGKLPIRWMAPESLKDG------IFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLE 218 (262)
T ss_pred ccccccccccccc----ccccCCCcCccccCHHHhccC------CcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence 9999876543210 001112234579999988763 56788999999999999998 4777643211
Q ss_pred --------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 --------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 --------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....+|..+.+++.+||..+|.+||++.+++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 219 YLRKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred HHHcCCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 1124567889999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-29 Score=269.46 Aligned_cols=244 Identities=17% Similarity=0.159 Sum_probs=185.9
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d~~~ 97 (771)
.|+..+.||.|+ | .||+++++.+|+.|+||.+...... .....+.+|+..+.++. ||||+++++++..+
T Consensus 5 ~~~~~~~lg~G~~g--~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~------ 75 (288)
T cd06616 5 DLKDLGEIGRGAFG--TVNKMLHKPSGTIMAVKRIRSTVDE-KEQKRLLMDLDVVMRSSDCPYIVKFYGALFRE------ 75 (288)
T ss_pred HhHHHHHhCCCCce--EEEEEEECCCCCEEEEEEehhccCh-HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecC------
Confidence 467778899987 7 9999999999999999999864333 34556788999999997 99999999998764
Q ss_pred cccEEEEEecCC-cchHHHHHHh--CCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 98 TKITIYIVTEPV-MPLSEKIKEL--GLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~--~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
...|++||++ .+|.++.... ..........+..++.|++.||.|||+..+++||||||+||+++.+|.+||+|||
T Consensus 76 --~~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg 153 (288)
T cd06616 76 --GDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFG 153 (288)
T ss_pred --CcEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecc
Confidence 3679999999 4554433221 0112233445677799999999999975799999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-----hhcc
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-----LRNT 249 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-----l~~~ 249 (771)
++........ .....+...|+|||++.+.- ...++.++|+|||||++|++++|..||.... +...
T Consensus 154 ~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~---~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~ 223 (288)
T cd06616 154 ISGQLVDSIA-------KTRDAGCRPYMAPERIDPSA---RDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQV 223 (288)
T ss_pred hhHHhccCCc-------cccccCccCccCHHHhcccc---ccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhh
Confidence 9876543211 11112345799999986521 1246678999999999999999998875321 1110
Q ss_pred -------------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 250 -------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 250 -------------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
..++..+.+++.+||+.+|.+||++.+++.| +||+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~-~~~~ 271 (288)
T cd06616 224 VKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH-PFIK 271 (288)
T ss_pred cCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC-hhhh
Confidence 1356678999999999999999999999998 4553
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-29 Score=272.39 Aligned_cols=242 Identities=18% Similarity=0.232 Sum_probs=191.2
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
..-|+....||.|+ | .||.|.++.+++.|+||++..+... ..+.+.+|+.+++.++||||+++++.+..+
T Consensus 20 ~~~~~~~~~ig~g~~g--~v~~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~----- 90 (297)
T cd06659 20 RSLLENYIKIGEGSTG--IVCIAREKHSGRQVAVKMMDLRKQQ--RRELLFNEVVIMRDYQHQNVVEMYKSYLVG----- 90 (297)
T ss_pred hhhHHhhhhcCCCCce--eEEEEEEcCCCCEEEEEEEEecccc--hHHHHHHHHHHHHhCCCCchhhhhhheeeC-----
Confidence 34577777899988 8 8999999999999999999764332 345678999999999999999999998863
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+|+|+||+ ++|..++....+ ....+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||
T Consensus 91 ---~~~~iv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~qi~~~L~~LH~-~~ivH~dl~p~Nill~~~~~~kL~dfg 162 (297)
T cd06659 91 ---EELWVLMEFLQGGALTDIVSQTRL----NEEQIATVCESVLQALCYLHS-QGVIHRDIKSDSILLTLDGRVKLSDFG 162 (297)
T ss_pred ---CeEEEEEecCCCCCHHHHHhhcCC----CHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHeEEccCCcEEEeech
Confidence 4899999999 468887765432 344567779999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh---------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE--------- 245 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~--------- 245 (771)
++......... .........|+|||++.+ ..++.++|+|||||++|||++|..||....
T Consensus 163 ~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~ 230 (297)
T cd06659 163 FCAQISKDVPK------RKSLVGTPYWMAPEVISR------TPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLR 230 (297)
T ss_pred hHhhccccccc------ccceecCccccCHHHHcc------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh
Confidence 98755432110 111233458999999875 356778999999999999999998874321
Q ss_pred ------hhccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcchh
Q 004157 246 ------LRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKL 288 (771)
Q Consensus 246 ------l~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n~l 288 (771)
......++..+.+++.+||..+|.+||++.++++|++|.+-.+
T Consensus 231 ~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~ 279 (297)
T cd06659 231 DSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTGL 279 (297)
T ss_pred ccCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccCCC
Confidence 1112356778899999999999999999999999854444433
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-29 Score=268.52 Aligned_cols=238 Identities=21% Similarity=0.286 Sum_probs=189.4
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~ 99 (771)
|++.+.|+.|. | .||+|.++.+|+.++||.+............+.+|++.|+.++||||+++++.+...
T Consensus 1 y~~~~~i~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-------- 70 (283)
T cd05118 1 YQKLGKIGEGTYG--VVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHK-------- 70 (283)
T ss_pred CccceeeecCCCc--eEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccC--------
Confidence 67788899987 7 999999999999999999987654444566788899999999999999999998763
Q ss_pred cEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccc
Q 004157 100 ITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (771)
Q Consensus 100 ~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~ 178 (771)
..+|+|+||+ ++|..++..... ......+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||++..
T Consensus 71 ~~~~~v~e~~~~~l~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~dl~p~nili~~~~~~~l~df~~~~~ 147 (283)
T cd05118 71 GDLYLVFEFMDTDLYKLIKDRQR--GLPESLIKSYLYQLLQGLAFCHS-HGILHRDLKPENLLINTEGVLKLADFGLARS 147 (283)
T ss_pred CCEEEEEeccCCCHHHHHHhhcc--cCCHHHHHHHHHHHHHHHHHHHH-CCeeecCcCHHHEEECCCCcEEEeeeeeeEe
Confidence 4899999999 578777766431 22344466679999999999996 8999999999999999999999999999877
Q ss_pred cCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh------------
Q 004157 179 FDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------------ 246 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l------------ 246 (771)
...... . .........|++||.+.+. ..++.++|+|||||++|+|++|..+|.....
T Consensus 148 ~~~~~~----~--~~~~~~~~~~~~PE~~~~~-----~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~ 216 (283)
T cd05118 148 FGSPVR----P--YTHYVVTRWYRAPELLLGD-----KGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLG 216 (283)
T ss_pred cCCCcc----c--ccCccCcccccCcHHHhcC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcC
Confidence 654320 0 0112233479999998652 3567899999999999999999987743110
Q ss_pred -------hc-----------------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 247 -------RN-----------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 247 -------~~-----------------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
.. ...++..+.+++.+||+.+|.+||++.+++.|++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~ 282 (283)
T cd05118 217 TPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPY 282 (283)
T ss_pred CCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCC
Confidence 00 1135667889999999999999999999999854
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-29 Score=266.01 Aligned_cols=236 Identities=17% Similarity=0.231 Sum_probs=186.2
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
...|++++.||.|+ | +||+|+++. +..|++|++..... .....+.+|+..++.++||||+++++++...
T Consensus 5 ~~~y~~~~~ig~g~~~--~vy~~~~~~-~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----- 74 (261)
T cd05148 5 REEFTLERKLGSGYFG--EVWEGLWKN-RVRVAIKILKSDDL--LKQQDFQKEVQALKRLRHKHLISLFAVCSVG----- 74 (261)
T ss_pred HHHHHHhhhhccCCCc--cEEEeEecC-CCcEEEEeccccch--hhHHHHHHHHHHHhcCCCcchhheeeeEecC-----
Confidence 34699999999998 8 999999987 99999999876432 2345688899999999999999999998763
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+|+||||+ ++|.+++..... .......+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+|||
T Consensus 75 ---~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~al~~lH~-~~i~h~dl~~~nilv~~~~~~kl~d~g 149 (261)
T cd05148 75 ---EPVYIITELMEKGSLLAFLRSPEG-QVLPVASLIDMACQVAEGMAYLEE-QNSIHRDLAARNILVGEDLVCKVADFG 149 (261)
T ss_pred ---CCeEEEEeecccCCHHHHHhcCCC-CCCCHHHHHHHHHHHHHHHHHHHH-CCeeccccCcceEEEcCCceEEEcccc
Confidence 3789999999 489999976432 122344455668999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh----h--
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL----R-- 247 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l----~-- 247 (771)
++........ .......+..|++||.... ..++.++|+|||||++|++++ |..|+..... .
T Consensus 150 ~~~~~~~~~~------~~~~~~~~~~~~~PE~~~~------~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~ 217 (261)
T cd05148 150 LARLIKEDVY------LSSDKKIPYKWTAPEAASH------GTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQI 217 (261)
T ss_pred chhhcCCccc------cccCCCCceEecCHHHHcc------CCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHH
Confidence 9976643211 0111223347999998765 356678999999999999998 6777643211 1
Q ss_pred -------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 -------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 -------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
....+|..+.+++.+||+.+|.+||++.++++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~ 257 (261)
T cd05148 218 TAGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREE 257 (261)
T ss_pred HhCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 113567789999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-29 Score=262.96 Aligned_cols=231 Identities=18% Similarity=0.230 Sum_probs=182.5
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
.-.|++.+.+|.|+ | .||+|..+ |..|++|.+... ...+.+.+|+.++++++||||+++++++..+
T Consensus 5 ~~~~~~~~~lg~g~~~--~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----- 71 (256)
T cd05082 5 MKELKLLQTIGKGEFG--DVMLGDYR--GNKVAVKCIKND----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEE----- 71 (256)
T ss_pred HHhCeeeeeecccCCC--eEEEEEEc--CCcEEEEEeCCC----chHHHHHHHHHHHHhCCCCCeeeEEEEEEcC-----
Confidence 34699999999998 8 89999765 889999998643 2245688999999999999999999976543
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
...+|+|+||+ ++|.++++...... .....+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||
T Consensus 72 --~~~~~lv~e~~~~~~L~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~nil~~~~~~~kl~dfg 147 (256)
T cd05082 72 --KGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEA-NNFVHRDLAARNVLVSEDNVAKVSDFG 147 (256)
T ss_pred --CCceEEEEECCCCCcHHHHHHhcCCCC-CCHHHHHHHHHHHHHHHHHHHh-CCEeccccchheEEEcCCCcEEecCCc
Confidence 24789999999 58999987654321 2334456678999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhhhc-----
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELRN----- 248 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l~~----- 248 (771)
++........ ....+..|+|||+..+ ..++.++|+|||||++|+|++ |..|+.......
T Consensus 148 ~~~~~~~~~~---------~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~ 212 (256)
T cd05082 148 LTKEASSTQD---------TGKLPVKWTAPEALRE------KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV 212 (256)
T ss_pred cceeccccCC---------CCccceeecCHHHHcc------CCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 9876543211 1112347999999865 356778999999999999997 777765432211
Q ss_pred --------cCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 249 --------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 249 --------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
...+|..+.+++.+|++.+|.+||++.++++.
T Consensus 213 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~ 252 (256)
T cd05082 213 EKGYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQ 252 (256)
T ss_pred hcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 13467889999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=267.54 Aligned_cols=243 Identities=18% Similarity=0.280 Sum_probs=192.9
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccCcC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d~~ 96 (771)
+|++.+.||.|+ | .||+|+.+.+|+.|+||++.++.. .......+.+|++.+++++ ||||++++++++..
T Consensus 2 ~y~~~~~lg~g~~~--~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~----- 74 (280)
T cd05581 2 DFKFGKIIGEGSFS--TVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDE----- 74 (280)
T ss_pred CceEeeeecCCCce--EEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCC-----
Confidence 599999999997 7 999999999999999999986432 2334567888999999999 99999999998763
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+|+|||++ ++|.+++..... .....+.+++.||+.||.|||+ .+++|+||+|+||+++.+|.++|+|||
T Consensus 75 ---~~~~lv~e~~~~~~L~~~l~~~~~---l~~~~~~~i~~ql~~~l~~Lh~-~~~~H~dl~~~ni~i~~~~~~~l~df~ 147 (280)
T cd05581 75 ---ENLYFVLEYAPNGELLQYIRKYGS---LDEKCTRFYAAEILLALEYLHS-KGIIHRDLKPENILLDKDMHIKITDFG 147 (280)
T ss_pred ---ceEEEEEcCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCHHHeEECCCCCEEecCCc
Confidence 4899999999 579998887642 2344567779999999999996 999999999999999999999999999
Q ss_pred cccccCCCCCCCCC--------------CccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCC
Q 004157 175 VLSEFDGNNEAANG--------------PMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL 240 (771)
Q Consensus 175 la~~~~~~~~~~~~--------------~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p 240 (771)
++............ .........+..|++||+... ..++.++|+|+|||++|++++|..|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~------~~~~~~~Di~slG~~l~~l~~g~~p 221 (280)
T cd05581 148 TAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNE------KPAGKSSDLWALGCIIYQMLTGKPP 221 (280)
T ss_pred cccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCC------CCCChhhhHHHHHHHHHHHHhCCCC
Confidence 98866543211000 001111233458999998775 3466789999999999999999988
Q ss_pred CChhhh------------hccCCCCcchHHHHHHHhccCCCCCCCh----HHHhhCCC
Q 004157 241 SKTEEL------------RNTASIPKSLLPDYQRLLSSMPSRRLNS----SKLIENSE 282 (771)
Q Consensus 241 ~~~~~l------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~----~~lL~~~~ 282 (771)
+..... .....+|+.+.+++++||+.+|.+||++ .++++|++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~ 279 (280)
T cd05581 222 FRGSNEYLTFQKILKLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPF 279 (280)
T ss_pred CCCccHHHHHHHHHhcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCC
Confidence 754321 0113467788999999999999999999 99999843
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-30 Score=271.01 Aligned_cols=235 Identities=20% Similarity=0.276 Sum_probs=175.8
Q ss_pred eecCCCCCCC-CceEEEEeEEC----CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 22 NIGDPYPSAW-GSWSHFQGTSK----DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 22 ~i~e~ig~G~-g~wtVy~g~~k----~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
++.+.||.|. | .||+|+.+ ..+..|+||.+... ......+.+.+|++.+++++||||+++++++...
T Consensus 2 ~~~~~ig~G~fg--~v~~~~~~~~~~~~~~~V~vk~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~----- 73 (259)
T PF07714_consen 2 KLIKQIGEGSFG--KVYRAEWKQKDNDKNQPVAVKILKPS-SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIEN----- 73 (259)
T ss_dssp EEEEEEEEESSE--EEEEEEEESTTTSSEEEEEEEEESTT-SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESS-----
T ss_pred EEeeEEccCCCc--EEEEEEEEcccCCCCEEEEEEEeccc-cccccceeeeeccccccccccccccccccccccc-----
Confidence 4667899998 8 99999998 34578999999543 3334467889999999999999999999999842
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+++||||| ++|.++|....... .....+..++.||+.||.|||+ .+++||||++.|||++.++.+||+|||
T Consensus 74 ---~~~~lv~e~~~~g~L~~~L~~~~~~~-~~~~~~~~i~~~i~~~l~~Lh~-~~iiH~~l~~~nill~~~~~~Kl~~f~ 148 (259)
T PF07714_consen 74 ---EPLFLVMEYCPGGSLDDYLKSKNKEP-LSEQQRLSIAIQIAEALSYLHS-NNIIHGNLSPSNILLDSNGQVKLSDFG 148 (259)
T ss_dssp ---SSEEEEEE--TTEBHHHHHHHTCTTT-SBHHHHHHHHHHHHHHHHHHHH-TTEEEST-SGGGEEEETTTEEEEESTT
T ss_pred ---cccccccccccccccccccccccccc-cccccccccccccccccccccc-ccccccccccccccccccccccccccc
Confidence 3589999999 58999999872211 2334456669999999999997 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhh--------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE-------- 245 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~-------- 245 (771)
++......... ...........|+|||.+.+. .++.++||||||+++||+++ |..++....
T Consensus 149 ~~~~~~~~~~~----~~~~~~~~~~~~~aPE~~~~~------~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~ 218 (259)
T PF07714_consen 149 LSRPISEKSKY----KNDSSQQLPLRYLAPEVLKDG------EYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKL 218 (259)
T ss_dssp TGEETTTSSSE----EESTTSESGGGGS-HHHHHHS------EESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHH
T ss_pred ccccccccccc----ccccccccccccccccccccc------cccccccccccccccccccccccccccccccccccccc
Confidence 99877321110 011112234489999998764 36789999999999999999 556664311
Q ss_pred -----hhccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 246 -----LRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 246 -----l~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
......+|..+.+++.+|++.+|.+||++.++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 219 KQGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp HTTEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred cccccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 1112456788999999999999999999999875
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-29 Score=264.20 Aligned_cols=245 Identities=11% Similarity=0.134 Sum_probs=184.8
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCC--cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGS--PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~--~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
|.+++.||.|+ | .||+|+.+.++. .|+||.+..........+.+.+|++.++.++||||+++++.+...... .
T Consensus 1 ~~i~~~ig~G~~g--~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~--~ 76 (272)
T cd05075 1 LALGKTLGEGEFG--SVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVES--E 76 (272)
T ss_pred CccccccCcccCc--eEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcc--c
Confidence 46789999998 8 999999987775 699999876554555567888999999999999999999876432211 0
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCC---CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLE---GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~---~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
.....++||||+ ++|..++...... .......+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|
T Consensus 77 ~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~Nil~~~~~~~kl~D 155 (272)
T cd05075 77 GYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSS-KSFIHRDLAARNCMLNENMNVCVAD 155 (272)
T ss_pred CCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHH-CCeeccccchhheEEcCCCCEEECC
Confidence 023579999999 5788877543221 112344456669999999999996 8999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh-----
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL----- 246 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l----- 246 (771)
||++........... ......+..|++||+..+ ..++.++|+|||||++|++++ |..||.....
T Consensus 156 fg~~~~~~~~~~~~~----~~~~~~~~~~~~pe~~~~------~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~ 225 (272)
T cd05075 156 FGLSKKIYNGDYYRQ----GRIAKMPVKWIAIESLAD------RVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYD 225 (272)
T ss_pred CCcccccCcccceec----CCcccCCcccCCHHHccC------CCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 999987643211000 011122347999999875 356789999999999999999 6677643211
Q ss_pred --------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 --------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 --------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....++..+.+++.+||..+|.+||++.++++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 226 YLRQGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred HHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 1123466778999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-29 Score=273.35 Aligned_cols=239 Identities=16% Similarity=0.184 Sum_probs=185.0
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCc----EEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEec
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSP----VSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~----VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e 91 (771)
....|++.+.||+|+ | +||+|+++.+++. |+||++... ......+.+.+|+.+++.++||||+++++++..+
T Consensus 5 ~~~~f~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~ 81 (316)
T cd05108 5 KETEFKKIKVLGSGAFG--TVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLTS 81 (316)
T ss_pred chhhceeeeeeecCCCc--eEEEEEEecCCCccceeEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC
Confidence 456799999999998 8 9999998777664 899998643 2233456788999999999999999999988752
Q ss_pred ccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEE
Q 004157 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWK 169 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~K 169 (771)
..++|+||+ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.++.+|
T Consensus 82 ---------~~~~v~e~~~~g~l~~~l~~~~~~--~~~~~~~~~~~qi~~~L~~LH~-~~iiH~dlkp~Nill~~~~~~k 149 (316)
T cd05108 82 ---------TVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNYLEE-RRLVHRDLAARNVLVKTPQHVK 149 (316)
T ss_pred ---------CceeeeecCCCCCHHHHHHhcccc--CCHHHHHHHHHHHHHHHHHHHh-cCeeccccchhheEecCCCcEE
Confidence 468999998 6799988765321 2233445568899999999996 8999999999999999999999
Q ss_pred EEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhhh-
Q 004157 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR- 247 (771)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l~- 247 (771)
|+|||++........ .........+..|++||++.+ ..++.++|+|||||++||+++ |..|+......
T Consensus 150 l~DfG~a~~~~~~~~----~~~~~~~~~~~~y~apE~~~~------~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~ 219 (316)
T cd05108 150 ITDFGLAKLLGADEK----EYHAEGGKVPIKWMALESILH------RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 219 (316)
T ss_pred EccccccccccCCCc----ceeccCCccceeecChHHhcc------CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 999999987653211 111111122347999999875 356789999999999999987 88887542211
Q ss_pred ------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 ------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 ------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....+..+..++.+|+..+|..||++.+++.+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 220 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 112345678899999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-29 Score=266.39 Aligned_cols=241 Identities=14% Similarity=0.167 Sum_probs=185.6
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECC-----CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEec
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKD-----DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~-----~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e 91 (771)
...|++.+.||.|+ | .||+|..+. .+..|++|.+..... ......+.+|+..++.++||||+++++++...
T Consensus 5 ~~~~~~~~~lg~g~~g--~vy~~~~~~~~~~~~~~~v~ik~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (277)
T cd05036 5 RDSITLLRALGHGAFG--EVYEGLYRGRDGDAVELQVAVKTLPESCS-EQDESDFLMEALIMSKFNHQNIVRLIGVSFER 81 (277)
T ss_pred HHHcEeeeECCCCCCC--cEEEEEEecCCCCCCceeEEEEEcCCCCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC
Confidence 35699999999998 8 899999987 678899998864322 22345678899999999999999999988753
Q ss_pred ccCcCCcccEEEEEecCC--cchHHHHHHhCCC----CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCC
Q 004157 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLE----GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT 165 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~----~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~ 165 (771)
...|+||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++||||+|+||+++.+
T Consensus 82 --------~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~-~~ivH~dlkp~nil~~~~ 152 (277)
T cd05036 82 --------LPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEE-NHFIHRDIAARNCLLTCK 152 (277)
T ss_pred --------CCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCEeecccchheEEEecc
Confidence 3679999999 5799998775421 112334456679999999999996 899999999999999876
Q ss_pred C---cEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCC
Q 004157 166 L---DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLS 241 (771)
Q Consensus 166 G---~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~ 241 (771)
| .+||+|||+++......... .......+..|+|||++.+ ..++.++|+|||||++|||++ |..||
T Consensus 153 ~~~~~~kl~dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~~g~~pf 222 (277)
T cd05036 153 GPGRVAKIADFGMARDIYRASYYR----KGGRAMLPIKWMPPEAFLD------GIFTSKTDVWSFGVLLWEIFSLGYMPY 222 (277)
T ss_pred CCCcceEeccCccccccCCcccee----cCCCCCccHhhCCHHHHhc------CCcCchhHHHHHHHHHHHHHcCCCCCC
Confidence 6 59999999998764321100 0001122347999999865 356789999999999999997 77777
Q ss_pred Chhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 242 KTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 242 ~~~~l~-------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
...... ....+|..+.+++.+|+..+|++||++.+++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 223 PGRTNQEVMEFVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred CCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 542210 113467789999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-29 Score=270.18 Aligned_cols=236 Identities=15% Similarity=0.184 Sum_probs=182.5
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCC--cEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGS--PVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~--~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d~ 95 (771)
.|++.+.||.|+ | .||+|+.+.++. .++||.+... ......+.+.+|++.++++ +||||+++++++...
T Consensus 3 ~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~---- 75 (297)
T cd05089 3 DIKFEDVIGEGNFG--QVIRAMIKKDGLKMNAAIKMLKEF-ASENDHRDFAGELEVLCKLGHHPNIINLLGACENR---- 75 (297)
T ss_pred cceeeeeecCCCcc--eEEEEEecCCCCcceeEEEEcccc-CCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccC----
Confidence 589999999998 8 999999988775 4688877632 2233456788999999999 799999999998763
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCC-------------CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCE
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLE-------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSV 160 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~-------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI 160 (771)
..+|+|+||+ ++|.+++...... .......+..++.||+.||.|||+ .+++||||||+||
T Consensus 76 ----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~-~~ivH~dlkp~Ni 150 (297)
T cd05089 76 ----GYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSE-KQFIHRDLAARNV 150 (297)
T ss_pred ----CcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCcCCcceE
Confidence 3789999999 5799998764311 112334566779999999999996 9999999999999
Q ss_pred EEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCC
Q 004157 161 VVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMR 239 (771)
Q Consensus 161 ~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~ 239 (771)
+++.++.+||+|||++...... ........+..|++||+..+ ..++.++|+|||||++|||++ |..
T Consensus 151 ll~~~~~~kl~dfg~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwSlG~il~el~t~g~~ 217 (297)
T cd05089 151 LVGENLASKIADFGLSRGEEVY-------VKKTMGRLPVRWMAIESLNY------SVYTTKSDVWSFGVLLWEIVSLGGT 217 (297)
T ss_pred EECCCCeEEECCcCCCccccce-------eccCCCCcCccccCchhhcc------CCCCchhhHHHHHHHHHHHHcCCCC
Confidence 9999999999999998643221 00111122346999998865 356789999999999999997 887
Q ss_pred CCChhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 240 LSKTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 240 p~~~~~l~-------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
||...... ....++..+.+++.+||..+|.+||+++++++.
T Consensus 218 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 271 (297)
T cd05089 218 PYCGMTCAELYEKLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ 271 (297)
T ss_pred CCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 77432211 112467789999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-29 Score=261.89 Aligned_cols=229 Identities=15% Similarity=0.146 Sum_probs=179.0
Q ss_pred CCCCCCC-CceEEEEeEECCCC---CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCccc
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDG---SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKI 100 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g---~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~ 100 (771)
++||.|+ | .||+|+....+ ..|+||.+...... ...+.+.+|+++++++.||||++++++++. .
T Consensus 1 ~~ig~G~~g--~v~~~~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---------~ 68 (257)
T cd05060 1 KELGHGNFG--SVVKGVYLMKSGKEVEVAVKTLKQEHIA-AGKKEFLREASVMAQLDHPCIVRLIGVCKG---------E 68 (257)
T ss_pred CccCccCce--eEEEeEeeccCCCcceEEEEecccccch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEcC---------C
Confidence 4688887 7 99999876554 78999999865443 345678899999999999999999998763 2
Q ss_pred EEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccc
Q 004157 101 TIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (771)
Q Consensus 101 ~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~ 178 (771)
.+|+||||+ ++|.++|..... .....+..++.|++.||.|||+ .+++||||||+||+++.+|.+||+|||++..
T Consensus 69 ~~~~v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lh~-~~i~H~di~p~nili~~~~~~kl~df~~~~~ 144 (257)
T cd05060 69 PLMLVMELAPLGPLLKYLKKRRE---IPVSDLKELAHQVAMGMAYLES-KHFVHRDLAARNVLLVNRHQAKISDFGMSRA 144 (257)
T ss_pred ceEEEEEeCCCCcHHHHHHhCCC---CCHHHHHHHHHHHHHHHHHHhh-cCeeccCcccceEEEcCCCcEEeccccccce
Confidence 679999998 579999987552 2344566779999999999996 8999999999999999999999999999886
Q ss_pred cCCCCCCCCCCccc-cccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh----------
Q 004157 179 FDGNNEAANGPMLQ-YAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL---------- 246 (771)
Q Consensus 179 ~~~~~~~~~~~~~~-~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l---------- 246 (771)
...... .+.. .....+..|+|||...+ ..++.++|+|||||++|++++ |.+||.....
T Consensus 145 ~~~~~~----~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~ 214 (257)
T cd05060 145 LGAGSD----YYRATTAGRWPLKWYAPECINY------GKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESG 214 (257)
T ss_pred eecCCc----ccccccCccccccccCHHHhcC------CCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcC
Confidence 643211 1100 11111247999998865 356779999999999999997 8888753211
Q ss_pred ---hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 247 ---RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 247 ---~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.....+|..+.+++.+|++.+|.+||++.++++
T Consensus 215 ~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 215 ERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred CcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 112346678899999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.4e-29 Score=266.15 Aligned_cols=251 Identities=17% Similarity=0.155 Sum_probs=190.5
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccC
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENID 94 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d 94 (771)
...+|++.+.+|.|. | .||+++.+.+++.|+||++..... ....+.+|+.+++++ +||||+++++++...+..
T Consensus 20 ~~~~y~~~~~l~~g~~~--~vy~~~~~~~~~~~aik~~~~~~~---~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~ 94 (291)
T cd06639 20 PTDTWEIIETIGKGTYG--KVYKVTNKKDGSLAAVKILDPISD---VDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKL 94 (291)
T ss_pred CCCCeEEEEEeecCCCe--EEEEEEECCCCCEEEEEEeccccc---HHHHHHHHHHHHHHhcCCCCeEEEEEEEEecccc
Confidence 466899999999998 8 999999999999999999875322 234567899999999 799999999998754311
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCC-CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEE
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~ 171 (771)
....+|+||||+ ++|.++++.... ........+..++.|++.||.|||+ .+++||||+|+||+++.+|.+||+
T Consensus 95 ---~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~ivH~dlkp~nili~~~~~~kl~ 170 (291)
T cd06639 95 ---VGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHN-NRIIHRDVKGNNILLTTEGGVKLV 170 (291)
T ss_pred ---CCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHEEEcCCCCEEEe
Confidence 124789999999 478888865321 1223445577789999999999996 899999999999999999999999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----hh
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LR 247 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----l~ 247 (771)
|||++......... .........|+|||++.... .....++.++|+|||||++|+|++|.+|+.... +.
T Consensus 171 dfg~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~-~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~ 243 (291)
T cd06639 171 DFGVSAQLTSTRLR------RNTSVGTPFWMAPEVIACEQ-QYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLF 243 (291)
T ss_pred ecccchhccccccc------ccCccCCccccChhhhcCCC-CcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHH
Confidence 99998765432110 11122345799999875421 001235678999999999999999998874321 11
Q ss_pred -----------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 248 -----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 248 -----------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
....++..+.+++.+||+.+|.+||++.++++| +||
T Consensus 244 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~-~~~ 290 (291)
T cd06639 244 KIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH-PFI 290 (291)
T ss_pred HHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC-ccc
Confidence 112344568889999999999999999999998 444
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.6e-31 Score=266.54 Aligned_cols=242 Identities=19% Similarity=0.227 Sum_probs=190.0
Q ss_pred CceecC-CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccCcC
Q 004157 20 PYNIGD-PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 20 ~Y~i~e-~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d~~ 96 (771)
.|+|.. .+|-|- | +|..+.+|.+|+.+|+|++.- .+.+++|++..-... ||||+.++|+|++.-.+
T Consensus 62 dY~is~qvLG~GinG--kV~~C~~k~T~ekfALKvL~D-------s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~-- 130 (400)
T KOG0604|consen 62 DYSISWQVLGAGING--KVVQCVHKRTQEKFALKVLLD-------SPKARREVELHWMASGHPHIVSIIDVYENSYQG-- 130 (400)
T ss_pred hheehhhhhccccCC--ceEEEEeccchhhhHHHHHhc-------CHHHHhHhhhhhhhcCCCceEEeehhhhhhccC--
Confidence 576654 567777 8 999999999999999999752 356889998776654 99999999999864322
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCC---CcEEEE
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT---LDWKLH 171 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~---G~~KL~ 171 (771)
..++.||||.+ +.|...|+.++.... .++....++.||+.|+.|||. .+|.||||||+|++.+.. ..+||+
T Consensus 131 --rkcLLiVmE~meGGeLfsriq~~g~~af-TErea~eI~~qI~~Av~~lH~-~nIAHRDlKpENLLyt~t~~na~lKLt 206 (400)
T KOG0604|consen 131 --RKCLLIVMECMEGGELFSRIQDRGDQAF-TEREASEIMKQIGLAVRYLHS-MNIAHRDLKPENLLYTTTSPNAPLKLT 206 (400)
T ss_pred --ceeeEeeeecccchHHHHHHHHcccccc-hHHHHHHHHHHHHHHHHHHHh-cchhhccCChhheeeecCCCCcceEec
Confidence 66899999999 569999988764322 233345569999999999996 999999999999999754 559999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh----
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---- 247 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~---- 247 (771)
||||+........ ....+.++.|.|||++.. ..|...+|+||||++||-|++|.+||-+..-.
T Consensus 207 DfGFAK~t~~~~~-------L~TPc~TPyYvaPevlg~------eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aisp 273 (400)
T KOG0604|consen 207 DFGFAKETQEPGD-------LMTPCFTPYYVAPEVLGP------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP 273 (400)
T ss_pred ccccccccCCCcc-------ccCCcccccccCHHHhCc------hhcCCCCCccchhHHHHHhhcCCCcccccCCccCCh
Confidence 9999987654221 112244668999999876 46888999999999999999999998543211
Q ss_pred ----------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcchhh
Q 004157 248 ----------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKLV 289 (771)
Q Consensus 248 ----------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n~lv 289 (771)
+...+++...++++.||..+|.+|++++++++|+|.-+...|
T Consensus 274 gMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~v 331 (400)
T KOG0604|consen 274 GMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEAV 331 (400)
T ss_pred hHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccccC
Confidence 113456678888999999999999999999999766555443
|
|
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-29 Score=262.23 Aligned_cols=232 Identities=14% Similarity=0.166 Sum_probs=180.8
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|++.+.||.|+ | .||.|..+ ++..|++|.+...... ...+.+|+..|++++||||++++++++..
T Consensus 5 ~~~~~~~lg~G~~~--~vy~~~~~-~~~~~a~K~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------- 71 (256)
T cd05114 5 ELTFMKELGSGQFG--VVHLGKWR-AQIKVAIKAINEGAMS---EEDFIEEAKVMMKLSHPKLVQLYGVCTQQ------- 71 (256)
T ss_pred HcEEeeEecCCcCc--eEEEEEec-cCceEEEEecccCCcc---HHHHHHHHHHHHHCCCCCceeEEEEEccC-------
Confidence 488999999998 8 99999876 4668999988643222 34578899999999999999999998763
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+|||++
T Consensus 72 -~~~~iv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~ni~i~~~~~~kl~d~g~~ 147 (256)
T cd05114 72 -KPLYIVTEFMENGCLLNYLRQRQG--KLSKDMLLSMCQDVCEGMEYLER-NSFIHRDLAARNCLVSSTGVVKVSDFGMT 147 (256)
T ss_pred -CCEEEEEEcCCCCcHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHHH-CCccccccCcceEEEcCCCeEEECCCCCc
Confidence 3789999999 579888875431 12344566779999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh----hc---
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL----RN--- 248 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l----~~--- 248 (771)
......... .......+..|+|||+..+ ..++.++|+|||||++|++++ |..||..... ..
T Consensus 148 ~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~ 216 (256)
T cd05114 148 RYVLDDEYT-----SSSGAKFPVKWSPPEVFNF------SKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISR 216 (256)
T ss_pred cccCCCcee-----ccCCCCCchhhCChhhccc------CccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC
Confidence 765432110 0111123347999999865 356679999999999999999 7777753221 10
Q ss_pred ------cCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 249 ------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 249 ------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
....+..+.+++.+|+..+|.+||++.++++
T Consensus 217 ~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 217 GFRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred CCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 1224556889999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-31 Score=265.96 Aligned_cols=258 Identities=17% Similarity=0.319 Sum_probs=201.9
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|+-..++|+|. | .||+|+.+.+|+.|++|+.-..+..+..-..+.+|+++|..|+|+|++.+++.+..........
T Consensus 18 ~yek~~kigqGtfg--eVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 18 KYEKLAKIGQGTFG--EVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred HHHHHHhcCCchHH--HHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence 466667899998 8 8999999999999999987776667777777889999999999999999998876432211112
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
+..+|+|+.+| .+|.-+|.+.... .....|+..+.+++.||.|||. .+|+|||+|+.||+|+.+|.+||+|||+++
T Consensus 96 r~t~ylVf~~cehDLaGlLsn~~vr--~sls~Ikk~Mk~Lm~GL~~iHr-~kilHRDmKaaNvLIt~dgilklADFGlar 172 (376)
T KOG0669|consen 96 RATFYLVFDFCEHDLAGLLSNRKVR--FSLSEIKKVMKGLMNGLYYIHR-NKILHRDMKAANVLITKDGILKLADFGLAR 172 (376)
T ss_pred cceeeeeHHHhhhhHHHHhcCcccc--ccHHHHHHHHHHHHHHHHHHHH-hhHHhhcccHhhEEEcCCceEEeecccccc
Confidence 55799999999 5788888665321 1233477789999999999996 899999999999999999999999999998
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R------ 247 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~------ 247 (771)
.+.......... ....+++..|++||.+.+. +.|+.++|+|+-||++.||+++.++++...- .
T Consensus 173 ~fs~~~n~~kpr--ytnrvvTLwYrppEllLG~-----r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~Lc 245 (376)
T KOG0669|consen 173 AFSTSKNVVKPR--YTNRVVTLWYRPPELLLGD-----REYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLC 245 (376)
T ss_pred ceecccccCCCC--cccceeeeecCCHHHhhcc-----cccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHh
Confidence 776543222111 2345667799999999986 6888999999999999999999988753210 0
Q ss_pred ------------------cc--CCCC-----------------cchHHHHHHHhccCCCCCCChHHHhhCCCCCcchhh
Q 004157 248 ------------------NT--ASIP-----------------KSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKLV 289 (771)
Q Consensus 248 ------------------~~--~~IP-----------------~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n~lv 289 (771)
.+ ..+| +...+++.+||..||.+|+.++++++|.+||.++..
T Consensus 246 Gs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~p 324 (376)
T KOG0669|consen 246 GSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPMP 324 (376)
T ss_pred ccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCCcc
Confidence 00 1111 145677889999999999999999999777776654
|
|
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-29 Score=262.31 Aligned_cols=233 Identities=17% Similarity=0.172 Sum_probs=181.8
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|++.+.+|.|. | .||.|.++ ++..++||++...... ...+.+|+++++.++||||++++++++..
T Consensus 5 ~~~~~~~lg~G~~~--~v~~~~~~-~~~~~~iK~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 71 (256)
T cd05059 5 ELTFLKELGSGQFG--VVHLGKWR-GKIDVAIKMIREGAMS---EDDFIEEAKVMMKLSHPNLVQLYGVCTKQ------- 71 (256)
T ss_pred HcchhhhhccCCCc--eEEEeEec-CCccEEEEEeccCCCC---HHHHHHHHHHHHhCCCCCEEEEEEEEcCC-------
Confidence 588999999998 8 89999886 5778999998754332 23467799999999999999999998753
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||+|+|||++.+|.+||+|||++
T Consensus 72 -~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~-~~i~H~dl~p~ni~i~~~~~~kl~dfg~~ 147 (256)
T cd05059 72 -RPIFIVTEYMANGCLLNYLRERKG--KLGTEWLLDMCSDVCEAMEYLES-NGFIHRDLAARNCLVGEDNVVKVSDFGLA 147 (256)
T ss_pred -CceEEEEecCCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHH-CCcccccccHhhEEECCCCcEEECCcccc
Confidence 3789999999 469998876432 23345567779999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh---------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL--------- 246 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l--------- 246 (771)
+...+.... .......+..|+|||+..+ ..++.++|+|||||++|++++ |..||.....
T Consensus 148 ~~~~~~~~~-----~~~~~~~~~~y~~Pe~~~~------~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~ 216 (256)
T cd05059 148 RYVLDDQYT-----SSQGTKFPVKWAPPEVFDY------SRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSA 216 (256)
T ss_pred eeccccccc-----ccCCCCCCccccCHHHhcc------CCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHc
Confidence 765432100 0001112237999999875 356678999999999999998 6777643211
Q ss_pred ----hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 ----RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 ----~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....+|..+.+++.+||+.+|++||++.++++.
T Consensus 217 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 217 GYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred CCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 1113457789999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.3e-29 Score=259.32 Aligned_cols=240 Identities=23% Similarity=0.286 Sum_probs=193.4
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.++.|+ | .||.+.+..++..|+||++............+.+|++.++.++|||++++++.+...
T Consensus 1 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~------- 71 (258)
T cd08215 1 KYEIIKQIGKGSFG--KVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEK------- 71 (258)
T ss_pred CceEEeeeccCCCe--EEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecC-------
Confidence 588999999987 7 999999999999999999987655445567788999999999999999999998763
Q ss_pred ccEEEEEecCC--cchHHHHHHhCC-CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+|+|+|++ ++|.+++..... ........+..++.||+.||.|||+ .+++|+||+|+||+++.++.+||+|||+
T Consensus 72 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~-~~~~H~dl~~~nil~~~~~~~~l~d~~~ 149 (258)
T cd08215 72 -GKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHS-RKILHRDIKPQNIFLTSNGLVKLGDFGI 149 (258)
T ss_pred -CEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHh-CCEecccCChHHeEEcCCCcEEECCccc
Confidence 4899999999 479998877531 1223344566779999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc-------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------- 248 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~------- 248 (771)
+........ . .........|+|||...+ ..++.++|+|+||+++|++++|..++.......
T Consensus 150 ~~~~~~~~~-----~-~~~~~~~~~y~~pe~~~~------~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~ 217 (258)
T cd08215 150 SKVLSSTVD-----L-AKTVVGTPYYLSPELCQN------KPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILK 217 (258)
T ss_pred eeecccCcc-----e-ecceeeeecccChhHhcc------CCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhc
Confidence 977654210 0 111233447999998765 346678999999999999999998875432111
Q ss_pred --c----CCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 249 --T----ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 249 --~----~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
. ..++..+.+++.+||+.+|.+||++.++++|++
T Consensus 218 ~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~ 257 (258)
T cd08215 218 GQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPF 257 (258)
T ss_pred CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCC
Confidence 1 245678899999999999999999999999843
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-29 Score=265.59 Aligned_cols=233 Identities=16% Similarity=0.202 Sum_probs=182.2
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEEE
Q 004157 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104 (771)
Q Consensus 27 ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iyI 104 (771)
||.|+ | +||++.++.+|+.|+||++.++... ......+.+|+++|++++||||+++++.++.. ..+|+
T Consensus 1 lg~g~~g--~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--------~~~~l 70 (277)
T cd05577 1 LGKGGFG--EVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETK--------DDLCL 70 (277)
T ss_pred CCCCCce--eEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecC--------CeEEE
Confidence 46666 7 9999999999999999999864322 22345667899999999999999999999863 38999
Q ss_pred EecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCCC
Q 004157 105 VTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGN 182 (771)
Q Consensus 105 VtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~ 182 (771)
||||+ ++|.+++...... ......+..++.|++.||.|||+ .+++||||+|+||+++.+|.+||+|||++......
T Consensus 71 v~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~~ql~~~l~~lH~-~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~ 148 (277)
T cd05577 71 VMTLMNGGDLKYHIYNVGEP-GFPEARAIFYAAQIICGLEHLHQ-RRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG 148 (277)
T ss_pred EEecCCCCcHHHHHHHcCcC-CCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEECCCCCEEEccCcchhhhccC
Confidence 99999 5799888765421 12344456668999999999996 89999999999999999999999999998765431
Q ss_pred CCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-------h--------
Q 004157 183 NEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------R-------- 247 (771)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-------~-------- 247 (771)
.. .........|++||+..+. .++.++|+|||||++|+|++|..||..... .
T Consensus 149 ~~-------~~~~~~~~~y~~PE~~~~~------~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 215 (277)
T cd05577 149 KK-------IKGRAGTPGYMAPEVLQGE------VYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAV 215 (277)
T ss_pred Cc-------cccccCCCCcCCHHHhcCC------CCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccc
Confidence 10 0112234489999998753 466789999999999999999988753211 0
Q ss_pred -ccCCCCcchHHHHHHHhccCCCCCC-----ChHHHhhCCCCCc
Q 004157 248 -NTASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENSEYFQ 285 (771)
Q Consensus 248 -~~~~IP~~l~~~i~~lL~~~P~~Rp-----s~~~lL~~~~fF~ 285 (771)
....++..+.+++.+||+.+|.+|| ++.+++.| +||.
T Consensus 216 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h-~~~~ 258 (277)
T cd05577 216 EYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREH-PLFK 258 (277)
T ss_pred cCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhC-hhhh
Confidence 1134577899999999999999999 88889988 5553
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-29 Score=262.94 Aligned_cols=235 Identities=16% Similarity=0.171 Sum_probs=183.1
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
...|++.+++|.|+ | .||+|... ++..|+||.+.... ...+.+.+|+.++++++||||+++++.+...
T Consensus 5 ~~~~~~~~~lg~g~~g--~v~~~~~~-~~~~v~iK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 73 (261)
T cd05072 5 RESIKLVKKLGAGQFG--EVWMGYYN-NSTKVAVKTLKPGT---MSVQAFLEEANLMKTLQHDKLVRLYAVVTKE----- 73 (261)
T ss_pred hHHeEEeeecCCcCCc--eEEEEEec-CCceEEEEEccCCc---hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCC-----
Confidence 34699999999998 8 89999865 66789999876432 2356788999999999999999999988753
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
...|+||||+ ++|.++++...... .....+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||
T Consensus 74 ---~~~~lv~e~~~~~~L~~~l~~~~~~~-~~~~~~~~~~~~l~~~l~~LH~-~~i~H~dl~p~nili~~~~~~~l~dfg 148 (261)
T cd05072 74 ---EPIYIITEYMAKGSLLDFLKSDEGGK-VLLPKLIDFSAQIAEGMAYIER-KNYIHRDLRAANVLVSESLMCKIADFG 148 (261)
T ss_pred ---CCcEEEEecCCCCcHHHHHHHhcCCC-CCHHHHHHHHHHHHHHHHHHHH-CCeeccccchhhEEecCCCcEEECCCc
Confidence 3789999999 57999887643221 2233455668999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh-------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL------- 246 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l------- 246 (771)
++......... .......+..|+|||+..+ ..++.++|+|||||++|+|++ |..||.....
T Consensus 149 ~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~ 217 (261)
T cd05072 149 LARVIEDNEYT-----AREGAKFPIKWTAPEAINF------GSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSAL 217 (261)
T ss_pred cceecCCCcee-----ccCCCccceecCCHHHhcc------CCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHH
Confidence 99876432110 0111122347999999865 345678999999999999998 7777743211
Q ss_pred ------hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 247 ------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 247 ------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.....+|..+.+++.+|++.+|++||+++++++
T Consensus 218 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 218 QRGYRMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred HcCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 112356788999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.8e-29 Score=262.76 Aligned_cols=241 Identities=13% Similarity=0.188 Sum_probs=187.3
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC---chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA---QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~---~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
.+|++++.+|.|+ | .||.|+++.+|+.|+||++..... .......+++|++.+++++||||+++++.+....
T Consensus 2 ~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~-- 77 (264)
T cd06653 2 VNWRLGKLLGRGAFG--EVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPE-- 77 (264)
T ss_pred CceeeeeeEccCCCe--EEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCC--
Confidence 4699999999998 8 899999999999999999864321 2244668889999999999999999999987543
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
...+|+|+||+ ++|.+++...... ....+..++.||+.||.|||+ .+++|+||+|+||+++.++.++|+|
T Consensus 78 ----~~~~~~v~e~~~~~~L~~~~~~~~~l---~~~~~~~~~~~i~~al~~LH~-~~i~H~dl~p~ni~i~~~~~~~l~d 149 (264)
T cd06653 78 ----EKKLSIFVEYMPGGSIKDQLKAYGAL---TENVTRRYTRQILQGVSYLHS-NMIVHRDIKGANILRDSAGNVKLGD 149 (264)
T ss_pred ----CCEEEEEEEeCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEEcCCCCEEECc
Confidence 24789999999 4798888765422 233455568999999999996 8999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----hh-
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LR- 247 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----l~- 247 (771)
||++........... . .........|+|||++.+ ...+.++|+|||||++|++++|..||.... ..
T Consensus 150 fg~~~~~~~~~~~~~-~--~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~ 220 (264)
T cd06653 150 FGASKRIQTICMSGT-G--IKSVTGTPYWMSPEVISG------EGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFK 220 (264)
T ss_pred cccccccccccccCc-c--ccccCCcccccCHhhhcC------CCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHH
Confidence 999986643111000 0 111233457999999876 345678999999999999999998885321 00
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 248 ---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 248 ---------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
....+++.+.+++.+|+. +|.+||++.+++.|+
T Consensus 221 ~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~ 262 (264)
T cd06653 221 IATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHP 262 (264)
T ss_pred HHcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCC
Confidence 012345568888899999 579999999999883
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-29 Score=271.09 Aligned_cols=247 Identities=15% Similarity=0.175 Sum_probs=182.9
Q ss_pred ceecCCCCCCCCceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCccc
Q 004157 21 YNIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKI 100 (771)
Q Consensus 21 Y~i~e~ig~G~g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~ 100 (771)
|.+++.+|.| | .||.++.+.+++.|+||++............+.+|++.++.++||||+++++++... .
T Consensus 4 ~~i~~~~~~~-~--~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~--------~ 72 (314)
T cd08216 4 TLIGKCFEDL-M--IVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVD--------S 72 (314)
T ss_pred hhhhHhhcCC-c--eEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecC--------C
Confidence 5556655544 4 566666677899999999987544445677899999999999999999999998863 4
Q ss_pred EEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccc
Q 004157 101 TIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (771)
Q Consensus 101 ~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~ 178 (771)
.+|++|||+ +.|.+++...... ......+..+++||+.||.|||+ .+++||||+|+||+++.+|.+||+||+.+..
T Consensus 73 ~~~~~~e~~~~~~l~~~l~~~~~~-~~~~~~~~~~~~~l~~~L~~LH~-~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~ 150 (314)
T cd08216 73 ELYVVSPLMAYGSCEDLLKTHFPE-GLPELAIAFILKDVLNALDYIHS-KGFIHRSVKASHILLSGDGKVVLSGLRYSVS 150 (314)
T ss_pred eEEEEEeccCCCCHHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCcceEEEecCCceEEecCcccee
Confidence 789999999 5688888764322 12345567779999999999996 8999999999999999999999999999876
Q ss_pred cCCCCCCCCCCcc-ccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-----hcc---
Q 004157 179 FDGNNEAANGPML-QYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-----RNT--- 249 (771)
Q Consensus 179 ~~~~~~~~~~~~~-~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-----~~~--- 249 (771)
............. .........|+|||++.+.. ..++.++|+|||||++|+|++|..||...+. ...
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~----~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~ 226 (314)
T cd08216 151 MIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNL----QGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGT 226 (314)
T ss_pred eccccccccccccccccccccccccCHHHhcCCC----CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc
Confidence 6432211100000 11112334799999986531 2466789999999999999999988753210 000
Q ss_pred --------------------------------------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 250 --------------------------------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 250 --------------------------------------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
..+...+.+++.+||..+|.+||++.++++| +||+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~-p~~~ 299 (314)
T cd08216 227 VPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH-SFFK 299 (314)
T ss_pred CccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC-chHh
Confidence 0011246678999999999999999999998 4553
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.9e-29 Score=262.35 Aligned_cols=231 Identities=14% Similarity=0.154 Sum_probs=178.9
Q ss_pred CCCCCC-CceEEEEeEE--CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEE
Q 004157 26 PYPSAW-GSWSHFQGTS--KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITI 102 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~--k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~i 102 (771)
+||.|+ | +||+|.. +.++..|+||++..........+.+.+|+.+++.++||||+++++.++. ...
T Consensus 2 ~lg~G~~g--~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---------~~~ 70 (257)
T cd05116 2 ELGSGNFG--TVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA---------ESW 70 (257)
T ss_pred cCCCcCCc--ceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC---------CCc
Confidence 578887 8 8999964 4567899999987654444556778999999999999999999998753 257
Q ss_pred EEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccC
Q 004157 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (771)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~ 180 (771)
|+||||+ ++|.+++..... .....+..++.|++.||.|||+ .+++||||||.||+++.++.+||+|||++....
T Consensus 71 ~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~al~~lH~-~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~ 146 (257)
T cd05116 71 MLVMELAELGPLNKFLQKNKH---VTEKNITELVHQVSMGMKYLEE-TNFVHRDLAARNVLLVTQHYAKISDFGLSKALG 146 (257)
T ss_pred EEEEecCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCEeecccchhhEEEcCCCeEEECCCccccccC
Confidence 9999998 579998876432 2234456669999999999996 899999999999999999999999999987764
Q ss_pred CCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh-------------
Q 004157 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL------------- 246 (771)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l------------- 246 (771)
....... .......+..|+|||.+.. ..++.++|+|||||++||+++ |..||.....
T Consensus 147 ~~~~~~~---~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~ 217 (257)
T cd05116 147 ADENYYK---AKTHGKWPVKWYAPECMNY------YKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERM 217 (257)
T ss_pred CCCCeee---ecCCCCCCccccCHhHhcc------CCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCC
Confidence 3211000 0111122357999998765 346678999999999999997 8888753211
Q ss_pred hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 ~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....+|..+.+++.+|++.+|.+||++.++.+.
T Consensus 218 ~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~ 251 (257)
T cd05116 218 ECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELR 251 (257)
T ss_pred CCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHH
Confidence 1123467789999999999999999999988654
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-29 Score=277.32 Aligned_cols=250 Identities=20% Similarity=0.273 Sum_probs=188.5
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc-
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA- 95 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~- 95 (771)
..+|++.+.||.|+ | .||+|+++.+|..|+||++..+.. ...+.+.+|++++++++||||+++++.+.......
T Consensus 4 ~~~y~~~~~Lg~g~~g--~vy~~~~~~~~~~v~iK~i~~~~~--~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 79 (342)
T cd07854 4 GSRYMDLRPLGCGSNG--LVFSAVDSDCDKRVAVKKIVLTDP--QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLT 79 (342)
T ss_pred CcceEEEEEecCCCCE--EEEEEEECCCCcEEEEEEEecCCC--chHHHHHHHHHHHHhcCCCcchhhHhhhcccccccc
Confidence 46799999999997 7 999999999999999999976543 33566888999999999999999998876532110
Q ss_pred -----CCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEc-CCCcE
Q 004157 96 -----TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT-QTLDW 168 (771)
Q Consensus 96 -----~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~-~~G~~ 168 (771)
......+|+||||+ ++|.+++....+ ....+..++.||+.||.|||+ .+++||||||+||+++ .++.+
T Consensus 80 ~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~l----~~~~~~~~~~qi~~aL~~LH~-~givH~dikp~Nili~~~~~~~ 154 (342)
T cd07854 80 EDVGSLTELNSVYIVQEYMETDLANVLEQGPL----SEEHARLFMYQLLRGLKYIHS-ANVLHRDLKPANVFINTEDLVL 154 (342)
T ss_pred cccccccccceEEEEeecccccHHHHHHcCCC----CHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEEcCCCceE
Confidence 00013689999999 567777765432 344566679999999999996 8999999999999997 45678
Q ss_pred EEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh--
Q 004157 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-- 246 (771)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-- 246 (771)
||+|||++.......... + . .....+...|+|||++.+. ..++.++|+|||||++|+|++|..||.....
T Consensus 155 kl~dfg~~~~~~~~~~~~-~-~-~~~~~~~~~y~aPE~~~~~-----~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~ 226 (342)
T cd07854 155 KIGDFGLARIVDPHYSHK-G-Y-LSEGLVTKWYRSPRLLLSP-----NNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELE 226 (342)
T ss_pred EECCcccceecCCccccc-c-c-cccccccccccCHHHHhCc-----cccCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 999999987654321100 0 0 0111234479999987542 3466789999999999999999988742110
Q ss_pred ----------------------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 247 ----------------------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 247 ----------------------------------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
.....++..+.+++.+||..+|.+||++.+++.| +||+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h-~~~~ 304 (342)
T cd07854 227 QMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH-PYMS 304 (342)
T ss_pred HHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC-Cccc
Confidence 0012356678889999999999999999999998 5665
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-29 Score=266.27 Aligned_cols=236 Identities=14% Similarity=0.170 Sum_probs=181.0
Q ss_pred ceecCCCCCCC-CceEEEEeE----ECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGT----SKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~----~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
|++.+.||.|+ | +||.++ ...++..|+||++..... ......+.+|++.|++++||||+++++++....
T Consensus 6 ~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--- 79 (283)
T cd05080 6 LKKIRVLGEGHFG--KVSLYCYDPANDGTGEMVAVKTLKRECG-QQNTSGWKKEINILKTLYHENIVKYKGCCSEQG--- 79 (283)
T ss_pred ceeceecccCCCc--EEEEeeEccccCCCCceEEEEEeccccC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC---
Confidence 48999999998 8 786654 456788999999875432 234567788999999999999999999887543
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
...+|+||||+ ++|.+++..... ....+..++.|++.||.|||+ .+++||||||+||+++.++.+||+||
T Consensus 80 ---~~~~~lv~e~~~~~~l~~~~~~~~l----~~~~~~~i~~~l~~~l~~lH~-~~i~H~dlkp~Nili~~~~~~~l~df 151 (283)
T cd05080 80 ---GKGLQLIMEYVPLGSLRDYLPKHKL----NLAQLLLFAQQICEGMAYLHS-QHYIHRDLAARNVLLDNDRLVKIGDF 151 (283)
T ss_pred ---CceEEEEecCCCCCCHHHHHHHcCC----CHHHHHHHHHHHHHHHHHHHH-CCeeccccChheEEEcCCCcEEEeec
Confidence 34789999999 579988876543 334456679999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh--------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-------- 245 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-------- 245 (771)
|++.......... .. ......+..|+|||...+ ..++.++|+|||||++|+|++|..|+....
T Consensus 152 g~~~~~~~~~~~~--~~-~~~~~~~~~~~~PE~~~~------~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~ 222 (283)
T cd05080 152 GLAKAVPEGHEYY--RV-REDGDSPVFWYAVECLKE------NKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIG 222 (283)
T ss_pred ccccccCCcchhh--cc-CCCCCCCceeeCHhHhcc------cCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhc
Confidence 9987664321100 00 001122346899998865 346678999999999999999986653211
Q ss_pred ----------h----------hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 246 ----------L----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 246 ----------l----------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
+ .....+|..+.+++.+|++.+|+.||++.++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 223 PKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred ccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 0 001235678999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=99.96 E-value=4e-29 Score=263.40 Aligned_cols=234 Identities=18% Similarity=0.159 Sum_probs=181.0
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
.-+|++.+++|.|+ | +||+|++..+ ..|+||++...... .+.+++|++.+++++||||+++++.++.
T Consensus 5 ~~~~~~~~~lg~g~~~--~v~~~~~~~~-~~valK~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~~------ 72 (262)
T cd05071 5 RESLRLEVKLGQGCFG--EVWMGTWNGT-TRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSE------ 72 (262)
T ss_pred hHHeeEeeecCCCCCC--cEEEEEecCC-ceEEEEecccCccC---HHHHHHHHHHHHhCCCCCcceEEEEECC------
Confidence 45699999999998 8 8999988755 46999998754332 3467889999999999999999988753
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
...|+||||+ ++|.+++..... .......+..++.|++.||.|||+ .+++||||+|+||+++.+|.+||+|||
T Consensus 73 ---~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~aL~~lH~-~~i~H~dl~p~Nill~~~~~~~L~dfg 147 (262)
T cd05071 73 ---EPIYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVER-MNYVHRDLRAANILVGENLVCKVADFG 147 (262)
T ss_pred ---CCcEEEEEcCCCCcHHHHHhhccc-cCCCHHHHHHHHHHHHHHHHHHHH-CCccccccCcccEEEcCCCcEEeccCC
Confidence 2579999999 579999876321 112334455669999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh----h--
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL----R-- 247 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l----~-- 247 (771)
++......... .......+..|++||+..+ ..++.++|+|||||++|++++ |..||..... .
T Consensus 148 ~~~~~~~~~~~-----~~~~~~~~~~y~~PE~~~~------~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~ 216 (262)
T cd05071 148 LARLIEDNEYT-----ARQGAKFPIKWTAPEAALY------GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 216 (262)
T ss_pred ceeeccccccc-----cccCCcccceecCHhHhcc------CCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHH
Confidence 99766432110 0111123347999998765 356788999999999999999 6666643211 0
Q ss_pred -------ccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 248 -------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 248 -------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
....+|..+.+++.+|++.+|.+||++.++++
T Consensus 217 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 217 ERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred hcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 11346788999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.9e-29 Score=297.12 Aligned_cols=242 Identities=13% Similarity=0.092 Sum_probs=186.5
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
+|++.+.||.|+ | +||+|+++.+|+.|+||++...... +...+.+.+|++++++++||||++++++++..
T Consensus 3 rYeIi~~LGkGgfG--~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~------ 74 (932)
T PRK13184 3 RYDIIRLIGKGGMG--EVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDG------ 74 (932)
T ss_pred CeEEEEEEecCCCE--EEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeC------
Confidence 699999999998 8 9999999999999999999754322 23456788999999999999999999998763
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCC--------CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLE--------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD 167 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~--------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~ 167 (771)
...|+||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++||||||+||+++.+|.
T Consensus 75 --~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs-~GIIHRDLKPeNILLd~dg~ 151 (932)
T PRK13184 75 --DPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHS-KGVLHRDLKPDNILLGLFGE 151 (932)
T ss_pred --CEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHH-CCccccCCchheEEEcCCCC
Confidence 4899999999 5798888753110 111122345568999999999996 89999999999999999999
Q ss_pred EEEEccCcccccCCCCCCCC-----------CCcccc-ccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHh
Q 004157 168 WKLHAFDVLSEFDGNNEAAN-----------GPMLQY-AWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELF 235 (771)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~-----------~~~~~~-~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~ 235 (771)
+||+|||++........... ..+... ...++..|+|||++.+ ..++.++|+|||||++|||+
T Consensus 152 vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g------~~~S~kSDIWSLGVILyELL 225 (932)
T PRK13184 152 VVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLG------VPASESTDIYALGVILYQML 225 (932)
T ss_pred EEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcC------CCCCcHhHHHHHHHHHHHHH
Confidence 99999999986632111000 000011 1234558999999876 35678999999999999999
Q ss_pred hCCCCCChhhhh---------------ccCCCCcchHHHHHHHhccCCCCCCChHHHh
Q 004157 236 SGMRLSKTEELR---------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLI 278 (771)
Q Consensus 236 ~g~~p~~~~~l~---------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL 278 (771)
+|..||...... ....+|..+.+++.+||..+|++|++..+.+
T Consensus 226 TG~~PF~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeL 283 (932)
T PRK13184 226 TLSFPYRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQEL 283 (932)
T ss_pred HCCCCCCCcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 999888543211 1135788899999999999999998755433
|
|
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.7e-29 Score=261.06 Aligned_cols=237 Identities=17% Similarity=0.222 Sum_probs=190.9
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.++.|. | .||+++++.+++.|+||++......+.....+.+|++.++.++||||+++++++...
T Consensus 1 ~y~~~~~i~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 71 (256)
T cd08530 1 DFKVLKKLGKGSYG--SVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDG------- 71 (256)
T ss_pred CceEeeeecCCCce--eEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccC-------
Confidence 489999999987 7 899999999999999999987554444456677899999999999999999999763
Q ss_pred ccEEEEEecCC--cchHHHHHHhCC-CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
...|+|+||+ ++|.+++..... ........+..++.|++.||.|||+ .+++||||+|+||+++.++.+||+|||+
T Consensus 72 -~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~-~~i~h~~l~~~ni~~~~~~~~kl~d~g~ 149 (256)
T cd08530 72 -NKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHE-QKILHRDLKSANILLVANDLVKIGDLGI 149 (256)
T ss_pred -CEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCcceEEEecCCcEEEeeccc
Confidence 4899999999 479888876322 1223344566779999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc-------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------- 248 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~------- 248 (771)
+....... .........|++||.+.+ ..++.++|+||||+++|++++|..|+.......
T Consensus 150 ~~~~~~~~--------~~~~~~~~~~~~Pe~~~~------~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~ 215 (256)
T cd08530 150 SKVLKKNM--------AKTQIGTPHYMAPEVWKG------RPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQR 215 (256)
T ss_pred hhhhccCC--------cccccCCccccCHHHHCC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Confidence 87665421 111223457999999865 356678999999999999999998876433211
Q ss_pred ------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 249 ------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 249 ------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
...++..+.+++.+||+.+|.+||++.++++|+
T Consensus 216 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p 254 (256)
T cd08530 216 GKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASP 254 (256)
T ss_pred CCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCC
Confidence 123556789999999999999999999999984
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-30 Score=285.67 Aligned_cols=245 Identities=19% Similarity=0.285 Sum_probs=196.9
Q ss_pred CCCCceecC-----CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEe
Q 004157 17 KDLPYNIGD-----PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (771)
Q Consensus 17 ~~~~Y~i~e-----~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~ 90 (771)
..|.|+..+ .+|.|+ | +||-|+++.+...++||.+..+... ..+-+..|+...++|+|.||++|++++..
T Consensus 568 iefeYeyde~~ervVLGKGTYG--~VYA~RD~~tqvrIaIKEIpekdsr--~~QPLhEEIaLH~~LrHkNIVrYLGs~se 643 (1226)
T KOG4279|consen 568 IEFEYEYDESNERVVLGKGTYG--TVYAARDMDTQVRIAIKEIPEKDSR--EVQPLHEEIALHSTLRHKNIVRYLGSVSE 643 (1226)
T ss_pred eEEEeeecCCCceEEeecCcee--EEEeeccccceeEEEeeecccccch--hhccHHHHHHHHHHHhhHhHHHHhhccCC
Confidence 356777655 368888 8 9999999999999999999765433 45668889999999999999999999764
Q ss_pred cccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEc-CCCc
Q 004157 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT-QTLD 167 (771)
Q Consensus 91 e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~-~~G~ 167 (771)
+.++-|.||.| ++|+.+|+..--.-...+..+.++-.||++||+|||+ ..|||||||-+||+|| .+|.
T Consensus 644 --------nGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHe-n~IVHRDIKGDNVLvNTySGv 714 (1226)
T KOG4279|consen 644 --------NGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHE-NKIVHRDIKGDNVLVNTYSGV 714 (1226)
T ss_pred --------CCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhh-cceeeccccCCcEEEeeccce
Confidence 23899999999 6899999764221122345678889999999999995 9999999999999997 5899
Q ss_pred EEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCC---hh
Q 004157 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSK---TE 244 (771)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~---~~ 244 (771)
+||+|||-+..+...+ |+ .-.+.++.+|||||++..+ ..+|+.++|||||||.+.||.+|+|||- ..
T Consensus 715 lKISDFGTsKRLAgin-----P~-TETFTGTLQYMAPEvIDqG----~RGYG~aADIWS~GCT~vEMATGrPPF~Elgsp 784 (1226)
T KOG4279|consen 715 LKISDFGTSKRLAGIN-----PC-TETFTGTLQYMAPEVIDQG----PRGYGKAADIWSFGCTMVEMATGRPPFVELGSP 784 (1226)
T ss_pred EEecccccchhhccCC-----cc-ccccccchhhhChHhhccC----CcCCCchhhhhhccceeEeeccCCCCeeecCCh
Confidence 9999999998886632 22 2235566799999999765 3689999999999999999999999973 11
Q ss_pred h--------hhccCCCCcch----HHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 245 E--------LRNTASIPKSL----LPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 245 ~--------l~~~~~IP~~l----~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
+ .+....||.++ ..++.+|+.++|..||++.++|.. +|.+
T Consensus 785 qAAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~D-pFlq 836 (1226)
T KOG4279|consen 785 QAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQD-PFLQ 836 (1226)
T ss_pred hHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccC-cccc
Confidence 1 23345777764 566889999999999999999987 4553
|
|
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.4e-29 Score=264.93 Aligned_cols=241 Identities=16% Similarity=0.248 Sum_probs=192.8
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
....|++.+.++.|. | .||+|.++.++..|+||++..... ..+.+.+|++.++.++||||+++++.+..+
T Consensus 17 ~~~~~~~~~~l~~g~~~--~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---- 87 (286)
T cd06614 17 PRELYKNLEKIGEGASG--EVYKATDRATGKEVAIKKMRLRKQ---NKELIINEILIMKDCKHPNIVDYYDSYLVG---- 87 (286)
T ss_pred ccccchHhHhccCCCCe--EEEEEEEccCCcEEEEEEEecCch---hHHHHHHHHHHHHHCCCCCeeEEEEEEEEC----
Confidence 455699999999987 6 999999998999999999986433 356688899999999999999999999874
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+|+|+||+ ++|.+++.... .......+..++.||+.||.|||+ .+++|+||+|+||+++.+|.+||+||
T Consensus 88 ----~~~~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~-~gi~H~dl~p~ni~i~~~~~~~l~d~ 160 (286)
T cd06614 88 ----DELWVVMEYMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHS-QNVIHRDIKSDNILLSKDGSVKLADF 160 (286)
T ss_pred ----CEEEEEEeccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHh-CCeeeCCCChhhEEEcCCCCEEECcc
Confidence 3899999999 47999998764 112334466679999999999996 99999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------- 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l------- 246 (771)
|++......... .........|++||++.+ ..++.++|+|||||++|+|++|..|+.....
T Consensus 161 ~~~~~~~~~~~~------~~~~~~~~~y~~PE~~~~------~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~ 228 (286)
T cd06614 161 GFAAQLTKEKSK------RNSVVGTPYWMAPEVIKR------KDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLI 228 (286)
T ss_pred chhhhhccchhh------hccccCCcccCCHhHhcC------CCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 998755432110 011123347999998765 3466789999999999999999988753221
Q ss_pred --------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 247 --------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 247 --------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
.....+|..+.+++.+||+.+|..||++.++++| .||.+
T Consensus 229 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~-~~~~~ 275 (286)
T cd06614 229 TTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH-PFLKK 275 (286)
T ss_pred HhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhC-hHhhc
Confidence 0112367889999999999999999999999998 45543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.96 E-value=4e-29 Score=265.28 Aligned_cols=241 Identities=14% Similarity=0.172 Sum_probs=182.1
Q ss_pred CCCceecCCCCCCC-CceEEEEeEEC-----CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEec
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSK-----DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k-----~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e 91 (771)
..+|++.+.+|.|+ | +||.|.++ .++..|+||++..... ......+.+|+.+++.++||||+++++++...
T Consensus 5 ~~~~~~~~~ig~G~~g--~v~~~~~~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~ 81 (277)
T cd05062 5 REKITMSRELGQGSFG--MVYEGIAKGVVKDEPETRVAIKTVNEAAS-MRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 81 (277)
T ss_pred HHHceeeeeeccccCC--eEEEEEeccCCCCCceeEEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 45699999999998 8 89998865 2356899999864322 23345678899999999999999999998753
Q ss_pred ccCcCCcccEEEEEecCC--cchHHHHHHhCCC-------CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEE
Q 004157 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLE-------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV 162 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~-------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v 162 (771)
...|+||||+ ++|.+++...... .......+..++.|++.||.|||+ .+++||||||+||++
T Consensus 82 --------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~-~~~vH~dlkp~Nil~ 152 (277)
T cd05062 82 --------QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNA-NKFVHRDLAARNCMV 152 (277)
T ss_pred --------CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCcchheEEE
Confidence 4789999999 5799998764311 111223355568999999999996 899999999999999
Q ss_pred cCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCC
Q 004157 163 TQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLS 241 (771)
Q Consensus 163 ~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~ 241 (771)
+.++.+||+|||++........... ......+..|+|||++.+ ..++.++|+|||||++|||++ |..|+
T Consensus 153 ~~~~~~~l~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~~~~~~p~ 222 (277)
T cd05062 153 AEDFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVRWMSPESLKD------GVFTTYSDVWSFGVVLWEIATLAEQPY 222 (277)
T ss_pred cCCCCEEECCCCCccccCCcceeec----CCCCccCHhhcChhHhhc------CCcCchhHHHHHHHHHHHHHcCCCCCC
Confidence 9999999999999876543211000 001122347999999875 356788999999999999998 56666
Q ss_pred Chhhh-------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 242 KTEEL-------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 242 ~~~~l-------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
..... .....+|..+.+++.+||+.+|.+||++.+++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 223 QGMSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred CCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 43211 0113466778999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.6e-29 Score=264.94 Aligned_cols=242 Identities=14% Similarity=0.151 Sum_probs=185.8
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCC-----CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEe
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDD-----GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~-----g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~ 90 (771)
...+|++.+.||.|+ | .||.|..+.. +..|+||.+.... .......+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~ 80 (277)
T cd05032 4 PREKITLIRELGQGSFG--MVYEGLAKGVVKGEPETRVAIKTVNENA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVST 80 (277)
T ss_pred chHHeeEEeEecCCCCc--eEEEEEEeccCCCCcceeEEEEecCCcc-CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcC
Confidence 455799999999998 8 8999998744 3789999986542 22334567889999999999999999999876
Q ss_pred cccCcCCcccEEEEEecCC--cchHHHHHHhCCCC-------CCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEE
Q 004157 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLEG-------SQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVV 161 (771)
Q Consensus 91 e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~-------~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~ 161 (771)
. ...|+||||+ ++|.+++....... ......+..++.||+.||.|||+ .+++||||+|+||+
T Consensus 81 ~--------~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~di~p~nil 151 (277)
T cd05032 81 G--------QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAA-KKFVHRDLAARNCM 151 (277)
T ss_pred C--------CCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCccccccChheEE
Confidence 3 3789999999 58999987643211 12233455568999999999996 89999999999999
Q ss_pred EcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCC
Q 004157 162 VTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRL 240 (771)
Q Consensus 162 v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p 240 (771)
++.+|.+||+|||+++.......... ......+..|+|||...+ ..++.++|+|||||++||+++ |..+
T Consensus 152 l~~~~~~kl~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~el~t~g~~p 221 (277)
T cd05032 152 VAEDLTVKIGDFGMTRDIYETDYYRK----GGKGLLPVRWMAPESLKD------GVFTTKSDVWSFGVVLWEMATLAEQP 221 (277)
T ss_pred EcCCCCEEECCcccchhhccCccccc----CCCCCccccccCHHHHhc------CCCCcccchHHHHHHHHHhhccCCCC
Confidence 99999999999999876543211000 111123457999999865 356678999999999999998 7777
Q ss_pred CChhhh-------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 241 SKTEEL-------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 241 ~~~~~l-------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
+..... .....+|..+.+++.+||..+|++||++.++++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~ 274 (277)
T cd05032 222 YQGLSNEEVLKFVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSS 274 (277)
T ss_pred CccCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 643211 1123456788999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=99.96 E-value=8e-29 Score=263.78 Aligned_cols=249 Identities=15% Similarity=0.162 Sum_probs=188.2
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccC
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENID 94 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d 94 (771)
...+|++.+.||.|+ | +||+|+++.+++.|+||++..... ....+.+|+++++.+ +||||+++++.+......
T Consensus 16 ~~~~~~~~~~lg~g~~~--~vy~~~~~~~~~~~~ik~~~~~~~---~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 90 (286)
T cd06638 16 PSDTWEIIETIGKGTYG--KVFKVLNKKNGSKAAVKILDPIHD---IDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVK 90 (286)
T ss_pred cccceeeeeeeccCCCc--EEEEEEECCCCceeEEEeeccccc---hHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccC
Confidence 356799999999998 8 999999999999999999864322 234577899999999 699999999987532110
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhC-CCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEE
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELG-LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~-~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~ 171 (771)
....+|+||||+ ++|.+++.... .........+..++.|++.||.|||+ .+++||||+|+||+++.+|.+||+
T Consensus 91 ---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~nili~~~~~~kl~ 166 (286)
T cd06638 91 ---NGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHV-NKTIHRDVKGNNILLTTEGGVKLV 166 (286)
T ss_pred ---CCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHh-CCccccCCCHHhEEECCCCCEEEc
Confidence 135899999999 47888876432 11222344466679999999999996 899999999999999999999999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----hh
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LR 247 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----l~ 247 (771)
|||++........ ......++..|+|||++..... ....++.++|+|||||++|+|++|..|+.... +.
T Consensus 167 dfg~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~-~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~ 239 (286)
T cd06638 167 DFGVSAQLTSTRL------RRNTSVGTPFWMAPEVIACEQQ-LDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALF 239 (286)
T ss_pred cCCceeecccCCC------ccccccCCCcccChhhhchhhh-ccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHh
Confidence 9999876643211 0111234458999999754210 11346678999999999999999998764321 11
Q ss_pred c-----------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 248 N-----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 248 ~-----------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
. ...++..+..++.+||+.+|.+||++.++++|.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 240 KIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred hccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 0 112345689999999999999999999999984
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-29 Score=278.21 Aligned_cols=245 Identities=17% Similarity=0.281 Sum_probs=192.2
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
..+|++.+.||.|. | +||+|+++.+++.|+||++............+.+|+.++++++||||+++++.+..++..
T Consensus 14 ~~~y~~~~~ig~g~~g--~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~-- 89 (343)
T cd07851 14 PDRYQNLSPVGSGAYG--QVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSL-- 89 (343)
T ss_pred cCceEEEEEeccCCce--EEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccc--
Confidence 34799999999997 7 999999999999999999876433334456677899999999999999999988654320
Q ss_pred CcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 97 ~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
.....+|+|||++ .+|.+++.... .....+.+++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||+
T Consensus 90 ~~~~~~~lv~e~~~~~L~~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~-~gi~H~dlkp~Nill~~~~~~kL~dfg~ 164 (343)
T cd07851 90 EDFQDVYLVTHLMGADLNNIVKCQK----LSDDHIQFLVYQILRGLKYIHS-AGIIHRDLKPSNIAVNEDCELKILDFGL 164 (343)
T ss_pred cccccEEEEEecCCCCHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeEECCCCCEEEccccc
Confidence 1123589999999 46888877533 2344567779999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h----
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R---- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~---- 247 (771)
+...... ......+..|+|||++.+. ..++.++|+|||||++|++++|..||..... .
T Consensus 165 ~~~~~~~---------~~~~~~~~~y~aPE~~~~~-----~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~ 230 (343)
T cd07851 165 ARHTDDE---------MTGYVATRWYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMN 230 (343)
T ss_pred ccccccc---------ccCCcccccccCHHHHhCC-----CCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence 9866432 1112334579999997642 2456789999999999999999988742210 0
Q ss_pred -----------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 -----------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 -----------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||+.+|.+||++.++++| +||..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h-~~~~~ 303 (343)
T cd07851 231 LVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH-PYLAE 303 (343)
T ss_pred hcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC-CCccc
Confidence 001346778899999999999999999999998 55543
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.9e-29 Score=268.37 Aligned_cols=242 Identities=17% Similarity=0.238 Sum_probs=185.5
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCC-----CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEE
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDD-----GSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTE 89 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~-----g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e 89 (771)
....|++.+.||.|+ | .||+|.++.. ...|++|.+..... +.....+.+|+..++++ +||||+++++++.
T Consensus 10 ~~~~~~~~~~ig~g~~g--~v~~~~~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 86 (293)
T cd05053 10 PRDRLTLGKPLGEGAFG--QVVKAEAVGLDNPNETSTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGVCT 86 (293)
T ss_pred CHhHeEEeeEecccccc--cEEEEEEecCCCCCCceeEEEEEccCCCC-HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEc
Confidence 445799999999998 8 8999987643 36899999875433 33456688999999999 7999999999987
Q ss_pred ecccCcCCcccEEEEEecCC--cchHHHHHHhCC-------------CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecC
Q 004157 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGL-------------EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGN 154 (771)
Q Consensus 90 ~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~-------------~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~d 154 (771)
.. ..+|+||||+ ++|..++..... ........+..++.||+.||.|||+ .+++|||
T Consensus 87 ~~--------~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~-~~ivH~d 157 (293)
T cd05053 87 QE--------GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLAS-KKCIHRD 157 (293)
T ss_pred CC--------CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH-CCccccc
Confidence 63 3789999999 579999876421 1122334456679999999999996 8999999
Q ss_pred CCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHH
Q 004157 155 VCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYEL 234 (771)
Q Consensus 155 Ikp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el 234 (771)
|||+||+++.+|.+||+|||+++......... .......+..|+|||+..+ ..++.++|+|||||++||+
T Consensus 158 lkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~el 227 (293)
T cd05053 158 LAARNVLVTEDHVMKIADFGLARDIHHIDYYR----KTTNGRLPVKWMAPEALFD------RVYTHQSDVWSFGVLLWEI 227 (293)
T ss_pred cceeeEEEcCCCeEEeCcccccccccccccee----ccCCCCCCccccCHHHhcc------CCcCcccceeehhhHHHHH
Confidence 99999999999999999999998765421100 0011122346999998765 3567889999999999999
Q ss_pred hh-CCCCCChhhh-------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 235 FS-GMRLSKTEEL-------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 235 ~~-g~~p~~~~~l-------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
++ |..++..... .....++..+.+++.+|+..+|.+||++.+++++
T Consensus 228 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 228 FTLGGSPYPGIPVEELFKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred hcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 97 7776643211 1123456789999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.2e-29 Score=261.42 Aligned_cols=239 Identities=16% Similarity=0.281 Sum_probs=184.3
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEEE
Q 004157 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104 (771)
Q Consensus 27 ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iyI 104 (771)
+|.|. | .||.++++.+|+.|+||++..... .......+.+|++.+++++||||+++++.++.. ..+|+
T Consensus 1 lg~g~~~--~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--------~~~~l 70 (265)
T cd05579 1 ISKGAYG--RVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGK--------KNLYL 70 (265)
T ss_pred CCCCCce--EEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecC--------cEEEE
Confidence 35565 6 999999999999999999976432 224567789999999999999999999998763 48999
Q ss_pred EecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCCC
Q 004157 105 VTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGN 182 (771)
Q Consensus 105 VtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~ 182 (771)
|+|++ ++|.+++..... .....+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||++......
T Consensus 71 v~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~L~~lH~-~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~ 146 (265)
T cd05579 71 VMEYLPGGDLASLLENVGS---LDEDVARIYIAEIVLALEYLHS-NGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVR 146 (265)
T ss_pred EEecCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-cCeecCCCCHHHeEEcCCCCEEEEecccchhcccC
Confidence 99999 479999887542 2344566779999999999996 99999999999999999999999999998754332
Q ss_pred CCCC--CCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-------------
Q 004157 183 NEAA--NGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------------- 247 (771)
Q Consensus 183 ~~~~--~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------------- 247 (771)
.... ..............|++||..... ..+.++|+|||||++|++++|..|+......
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~------~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 220 (265)
T cd05579 147 RQINLNDDEKEDKRIVGTPDYIAPEVILGQ------GHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEW 220 (265)
T ss_pred cccccccccccccCcccCccccCHHHhcCC------CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCC
Confidence 1100 000001112234579999998753 4667899999999999999999887533211
Q ss_pred -ccCCCCcchHHHHHHHhccCCCCCCCh---HHHhhCCCCCcc
Q 004157 248 -NTASIPKSLLPDYQRLLSSMPSRRLNS---SKLIENSEYFQN 286 (771)
Q Consensus 248 -~~~~IP~~l~~~i~~lL~~~P~~Rps~---~~lL~~~~fF~n 286 (771)
....++..+.+++.+||+.+|.+||++ .++++| +||++
T Consensus 221 ~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~-~~~~~ 262 (265)
T cd05579 221 PEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNH-PFFKG 262 (265)
T ss_pred CccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcC-ccccC
Confidence 112247889999999999999999999 999998 55543
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-29 Score=294.42 Aligned_cols=252 Identities=20% Similarity=0.270 Sum_probs=187.3
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc---
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA--- 95 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~--- 95 (771)
.|+..+.+|.|+ | .||++++|-||..||||++..+. .+.....+.+|++.|.+|.|||||+|+..|.+.....
T Consensus 480 DFEEL~lLGkGGFG--~VvkVRNKlDGr~YAIKKIpl~~-s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ 556 (1351)
T KOG1035|consen 480 DFEELELLGKGGFG--SVVKVRNKLDGREYAIKKIPLKA-SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVL 556 (1351)
T ss_pred hhHHHHHhcCCCCc--eEEEEeecccchhhhhhhccCch-HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccc
Confidence 466677899999 9 99999999999999999999765 5566778889999999999999999998775322000
Q ss_pred -----------------------------------------------C--------------------------------
Q 004157 96 -----------------------------------------------T-------------------------------- 96 (771)
Q Consensus 96 -----------------------------------------------~-------------------------------- 96 (771)
+
T Consensus 557 ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~ 636 (1351)
T KOG1035|consen 557 EIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDS 636 (1351)
T ss_pred cccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccccc
Confidence 0
Q ss_pred ----------------------C-------cccEEEEEecCCc-c-hHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHH
Q 004157 97 ----------------------S-------TKITIYIVTEPVM-P-LSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLN 145 (771)
Q Consensus 97 ----------------------~-------~~~~iyIVtE~v~-~-L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH 145 (771)
. ....+||-||||. . |.+++.++.+.. +. ...+..+.||++||.|+|
T Consensus 637 e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~-~~-d~~wrLFreIlEGLaYIH 714 (1351)
T KOG1035|consen 637 EGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS-QR-DEAWRLFREILEGLAYIH 714 (1351)
T ss_pred CCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch-hh-HHHHHHHHHHHHHHHHHH
Confidence 0 1157899999994 3 566666654432 22 335667999999999999
Q ss_pred cCCCceecCCCCCCEEEcCCCcEEEEccCcccccCC---C-------CCCCCC-Cc-cccccccCCCCCChhcccccccc
Q 004157 146 NDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG---N-------NEAANG-PM-LQYAWLVGAQYKPVELAKSDWTA 213 (771)
Q Consensus 146 ~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~---~-------~~~~~~-~~-~~~~~~~~~~Y~aPE~~~~~~~~ 213 (771)
+ .|+|||||||.|||+++++.+||||||+++.... . .....+ .- .....+++.-|+|||++.+. ..
T Consensus 715 ~-~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~-~~ 792 (1351)
T KOG1035|consen 715 D-QGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDT-SS 792 (1351)
T ss_pred h-CceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccc-cc
Confidence 6 8999999999999999999999999999987220 0 000001 11 12334455589999998763 11
Q ss_pred ccCCCCCcchHHHHHHHHHHHhhCCCCCChh--------hhhccCCCCcc----------hHHHHHHHhccCCCCCCChH
Q 004157 214 VRKSPPWSIDSWGLGCLIYELFSGMRLSKTE--------ELRNTASIPKS----------LLPDYQRLLSSMPSRRLNSS 275 (771)
Q Consensus 214 ~~~~~~~~~Di~SLG~li~el~~g~~p~~~~--------~l~~~~~IP~~----------l~~~i~~lL~~~P~~Rps~~ 275 (771)
..|..++||||||++++||+.. |.+. .++ -..||.. -..+|+.|++.||.+|||+.
T Consensus 793 --~~Yn~KiDmYSLGIVlFEM~yP---F~TsMERa~iL~~LR-~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~ 866 (1351)
T KOG1035|consen 793 --NKYNSKIDMYSLGIVLFEMLYP---FGTSMERASILTNLR-KGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTAT 866 (1351)
T ss_pred --ccccchhhhHHHHHHHHHHhcc---CCchHHHHHHHHhcc-cCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHH
Confidence 3588999999999999999973 5432 222 2445544 34568899999999999999
Q ss_pred HHhhCCCCCc
Q 004157 276 KLIENSEYFQ 285 (771)
Q Consensus 276 ~lL~~~~fF~ 285 (771)
++|++ ++|-
T Consensus 867 eLL~s-~llp 875 (1351)
T KOG1035|consen 867 ELLNS-ELLP 875 (1351)
T ss_pred HHhhc-cCCC
Confidence 99987 4553
|
|
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4e-29 Score=265.90 Aligned_cols=239 Identities=17% Similarity=0.215 Sum_probs=182.8
Q ss_pred CceecCCCCCCC-CceEEEEeEECCC-----CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDD-----GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~-----g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
.|.+.+.+|.|+ | +||+|+...+ +..|+||++.... .......+.+|+.+++.++||||+++++.++..
T Consensus 6 ~~~~~~~lg~G~~g--~V~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~-- 80 (283)
T cd05091 6 TVRFMEELGEDRFG--KVYKGHLFGTAPGEQTQAVAIKTLKDKA-EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKE-- 80 (283)
T ss_pred HHHHHHHhCCCCCC--eEEEEEEecCCCCCceeEEEEEEccCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC--
Confidence 488899999998 8 9999987543 5789999997543 223456788999999999999999999998763
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCC-------------CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCC
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGL-------------EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLS 158 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~-------------~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~ 158 (771)
..+++++||+ ++|.+++..... ........+..++.|++.||.|||+ .+++||||||+
T Consensus 81 ------~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~-~gi~H~dlkp~ 153 (283)
T cd05091 81 ------QPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSS-HHVVHKDLATR 153 (283)
T ss_pred ------CceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH-cCccccccchh
Confidence 3789999999 578888854221 0112233466779999999999996 89999999999
Q ss_pred CEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-C
Q 004157 159 SVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-G 237 (771)
Q Consensus 159 NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g 237 (771)
||+++.++.+||+|||+++........ ........+..|+|||.+.++ .++.++|+|||||++|||++ |
T Consensus 154 Nil~~~~~~~kl~Dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~~l~el~~~g 223 (283)
T cd05091 154 NVLVFDKLNVKISDLGLFREVYAADYY----KLMGNSLLPIRWMSPEAIMYG------KFSIDSDIWSYGVVLWEVFSYG 223 (283)
T ss_pred heEecCCCceEecccccccccccchhe----eeccCccCCccccCHHHHhcC------CCCcchhHHHHHHHHHHHHcCC
Confidence 999999999999999998866432110 000111223479999998653 46678999999999999998 6
Q ss_pred CCCCChhhh----h---c------cCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 238 MRLSKTEEL----R---N------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 238 ~~p~~~~~l----~---~------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
..++..... . . ...+|..+.+++.+|++.+|.+||++.+++..
T Consensus 224 ~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~ 279 (283)
T cd05091 224 LQPYCGYSNQDVIEMIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR 279 (283)
T ss_pred CCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence 666543211 0 1 13467789999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.6e-29 Score=264.97 Aligned_cols=237 Identities=17% Similarity=0.216 Sum_probs=189.2
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~ 99 (771)
|++.+.||.|. | .||+|.++.+++.|+||++...... .....+.+|++.+++++||||+++++.+...
T Consensus 6 ~~~~~~ig~G~~~--~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-------- 74 (277)
T cd06641 6 FTKLEKIGKGSFG--EVFKGIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYVTKYYGSYLKD-------- 74 (277)
T ss_pred hhhheeEeecCCe--EEEEEEECCCCcEEEEEEeccccch-HHHHHHHHHHHHHHhcCCCCEeEEEEEEEeC--------
Confidence 77888899987 7 9999999999999999998754332 3456788999999999999999999999863
Q ss_pred cEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 100 ITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 100 ~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
..+|+||||+ ++|.+++.... .....+..++.|++.+|.|||+ .+++|+||+|+||+++.+|.++|+|||++.
T Consensus 75 ~~~~lv~e~~~~~~l~~~i~~~~----~~~~~~~~~~~~l~~~l~~lh~-~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~ 149 (277)
T cd06641 75 TKLWIIMEYLGGGSALDLLEPGP----LDETQIATILREILKGLDYLHS-EKKIHRDIKAANVLLSEHGEVKLADFGVAG 149 (277)
T ss_pred CeEEEEEEeCCCCcHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHcc-CCeecCCCCHHhEEECCCCCEEEeecccce
Confidence 4899999999 46888886543 2344567779999999999996 899999999999999999999999999987
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh----------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---------- 247 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~---------- 247 (771)
........ .........|+|||.+.+ ...+.++|+|||||++|++++|..|+......
T Consensus 150 ~~~~~~~~------~~~~~~~~~y~~PE~~~~------~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~ 217 (277)
T cd06641 150 QLTDTQIK------RNTFVGTPFWMAPEVIKQ------SAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNN 217 (277)
T ss_pred ecccchhh------hccccCCccccChhhhcc------CCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCC
Confidence 65432110 111123447999999865 24567899999999999999999887532110
Q ss_pred ---ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 ---NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 ---~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....+|..+.+++.+|+..+|.+||++.++++| +||.+
T Consensus 218 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~-~~~~~ 258 (277)
T cd06641 218 PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH-KFIVR 258 (277)
T ss_pred CCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC-HHHhh
Confidence 112356789999999999999999999999998 55544
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.2e-29 Score=262.02 Aligned_cols=238 Identities=16% Similarity=0.171 Sum_probs=185.2
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCC---CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDD---GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~---g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
..|++.+.||.|+ | +||+|+.+.+ ...|+||++.... .......+.+|+..+++++||||+++++.+...
T Consensus 4 ~~~~~~~~lg~g~~g--~vy~~~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--- 77 (266)
T cd05033 4 SYVTIEKVIGGGEFG--EVCRGRLKLPGKKEIDVAIKTLKAGS-SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKS--- 77 (266)
T ss_pred HHceeeeEecCCccc--eEEEEEEccCCCCcceEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecC---
Confidence 4599999999998 8 9999998754 4579999987543 233455678899999999999999999998763
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
..+|+||||+ ++|.+++..... ......+..++.|++.||.|||+ .+++||||+|+||+++.++.+||+|
T Consensus 78 -----~~~~iv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~Lh~-~~i~H~di~p~nili~~~~~~~l~d 149 (266)
T cd05033 78 -----RPVMIITEYMENGSLDKFLRENDG--KFTVGQLVGMLRGIASGMKYLSE-MNYVHRDLAARNILVNSNLVCKVSD 149 (266)
T ss_pred -----CceEEEEEcCCCCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCcceEEEcCCCCEEECc
Confidence 3789999999 479998876432 12233455568999999999996 9999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh-----
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL----- 246 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l----- 246 (771)
||++........ .+.......+..|+|||...+ ..++.++|+|||||++|++++ |..|+.....
T Consensus 150 fg~~~~~~~~~~----~~~~~~~~~~~~y~~Pe~~~~------~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~ 219 (266)
T cd05033 150 FGLSRRLEDSEA----TYTTKGGKIPIRWTAPEAIAY------RKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIK 219 (266)
T ss_pred cchhhccccccc----ceeccCCCCCccccChhhhcc------CCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHH
Confidence 999987752111 111112223457999999875 356678999999999999997 7777632111
Q ss_pred --------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 --------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 --------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
......|..+.+++.+|++.+|.+||++.+++++
T Consensus 220 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 220 AVEDGYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred HHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 1123457789999999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-30 Score=278.21 Aligned_cols=248 Identities=19% Similarity=0.268 Sum_probs=196.1
Q ss_pred cee--cCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 21 YNI--GDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 21 Y~i--~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
|+| .+.+|+|. | +||-|+++.+|+.||||++++-.-.......+++|+.+|..++||+|+.+...||+
T Consensus 564 YQif~devLGSGQFG--~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET------- 634 (888)
T KOG4236|consen 564 YQIFADEVLGSGQFG--TVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFET------- 634 (888)
T ss_pred HHhhhHhhccCCcce--eeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecC-------
Confidence 555 35788988 9 99999999999999999999854444456789999999999999999999999987
Q ss_pred cccEEEEEecCC-cchHH-HHHH-hCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCC---CcEEEE
Q 004157 98 TKITIYIVTEPV-MPLSE-KIKE-LGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT---LDWKLH 171 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~-~L~~-~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~---G~~KL~ 171 (771)
+..+++|||.+ ++..+ .|.. .+. ..++..++.+.||+.||.|||. .+|+||||||+||++... -++|||
T Consensus 635 -~ervFVVMEKl~GDMLEMILSsEkgR---L~er~TkFlvtQIL~ALr~LH~-knIvHCDLKPENVLLas~~~FPQvKlC 709 (888)
T KOG4236|consen 635 -PERVFVVMEKLHGDMLEMILSSEKGR---LPERITKFLVTQILVALRYLHF-KNIVHCDLKPENVLLASASPFPQVKLC 709 (888)
T ss_pred -CceEEEEehhhcchHHHHHHHhhccc---chHHHHHHHHHHHHHHHHHhhh-cceeeccCCchheeeccCCCCCceeec
Confidence 45999999999 66444 4433 222 2344556679999999999995 899999999999999865 459999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh-h----h
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-E----L 246 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~-~----l 246 (771)
|||+++.+.+.. .+..-++++.|.|||++.. ++|....||||.|++||--++|..||+.+ + +
T Consensus 710 DFGfARiIgEks-------FRrsVVGTPAYLaPEVLrn------kGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQI 776 (888)
T KOG4236|consen 710 DFGFARIIGEKS-------FRRSVVGTPAYLAPEVLRN------KGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQI 776 (888)
T ss_pred cccceeecchhh-------hhhhhcCCccccCHHHHhh------ccccccccceeeeEEEEEEecccccCCCccchhHHh
Confidence 999999887632 1233456679999999987 68889999999999999999999888532 2 2
Q ss_pred hc---------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcchhhhhhhhh
Q 004157 247 RN---------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKLVDTIHFM 295 (771)
Q Consensus 247 ~~---------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n~lv~~~~~L 295 (771)
.+ ...|.....++|..||+..-.+|+++++-+.|+|.-.--+...++.|
T Consensus 777 QNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~yq~w~DLRel 834 (888)
T KOG4236|consen 777 QNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDYQTWLDLREL 834 (888)
T ss_pred hccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcchHHHHHHHH
Confidence 21 13567778999999999999999999999999543333333333433
|
|
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.7e-29 Score=274.21 Aligned_cols=245 Identities=17% Similarity=0.283 Sum_probs=189.2
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
..+|++.+.||.|. | .||.|.++.+|+.|+||++..........+.+.+|+.++++++||||+++++++......
T Consensus 16 ~~~y~~~~~lg~G~~g--~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~-- 91 (345)
T cd07877 16 PERYQNLSPVGSGAYG--SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSL-- 91 (345)
T ss_pred cCceEEEEEeeecCCe--EEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccc--
Confidence 35799999999998 8 899999999999999999976433333456678899999999999999999988643211
Q ss_pred CcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 97 ~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
.....+|+++|++ ++|.+.++...+ ....+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||+
T Consensus 92 ~~~~~~~lv~~~~~~~L~~~~~~~~l----~~~~~~~i~~qi~~aL~~LH~-~~ivH~dlkp~NIll~~~~~~kl~dfg~ 166 (345)
T cd07877 92 EEFNDVYLVTHLMGADLNNIVKCQKL----TDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGL 166 (345)
T ss_pred cccccEEEEehhcccCHHHHHhcCCC----CHHHHHHHHHHHHHHHHHHHH-CCeeecCCChHHEEEcCCCCEEEecccc
Confidence 0123689999999 468777765432 334466679999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h----
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R---- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~---- 247 (771)
+....... .....+..|+|||++.+. ..++.++|+|||||++|+|++|.+||..... .
T Consensus 167 ~~~~~~~~---------~~~~~~~~y~aPE~~~~~-----~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~ 232 (345)
T cd07877 167 ARHTDDEM---------TGYVATRWYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 232 (345)
T ss_pred cccccccc---------cccccCCCccCHHHHhCc-----cCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 87653311 112334579999987542 2456789999999999999999988742110 0
Q ss_pred -----------------------cc------------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 -----------------------NT------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 -----------------------~~------------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
.+ ...+..+.+++.+||+.+|.+|+++.+++.| +||..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h-~~f~~ 305 (345)
T cd07877 233 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH-AYFAQ 305 (345)
T ss_pred HhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC-hhhhh
Confidence 00 1235567889999999999999999999998 45643
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=99.96 E-value=5e-29 Score=261.77 Aligned_cols=234 Identities=14% Similarity=0.137 Sum_probs=181.3
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
-.|++.+.+|.|. | +||.|.++ .+..|+||.+...... .+.+.+|+..+++++||||+++++++...
T Consensus 4 ~~~~~~~~lg~G~~~--~vy~~~~~-~~~~~aik~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------ 71 (256)
T cd05113 4 KDLTFLKELGTGQFG--VVKYGKWR-GQYDVAIKMIKEGSMS---EDEFIEEAKVMMKLSHEKLVQLYGVCTKQ------ 71 (256)
T ss_pred HHeEEeeEecCcccc--eEEEEEec-CCCcEEEEEcCCCccc---HHHHHHHHHHHhcCCCCCeeeEEEEEccC------
Confidence 4599999999998 8 89999876 3557999998754322 34578899999999999999999998753
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++|+||+|+||+++.++.+||+|||+
T Consensus 72 --~~~~lv~e~~~~~~l~~~i~~~~~--~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~nili~~~~~~kl~d~g~ 146 (256)
T cd05113 72 --RPIYIVTEYMSNGCLLNYLREHGK--RFQPSQLLEMCKDVCEGMAYLES-KQFIHRDLAARNCLVDDQGCVKVSDFGL 146 (256)
T ss_pred --CCcEEEEEcCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHh-CCeeccccCcceEEEcCCCCEEECCCcc
Confidence 3689999999 469888876432 23345567779999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh-------h
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL-------R 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l-------~ 247 (771)
+......... .......+..|++||+..+. .++.++|+|||||++|+|++ |..|+..... .
T Consensus 147 ~~~~~~~~~~-----~~~~~~~~~~y~~pe~~~~~------~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~ 215 (256)
T cd05113 147 SRYVLDDEYT-----SSVGSKFPVRWSPPEVLLYS------KFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVS 215 (256)
T ss_pred ceecCCCcee-----ecCCCccChhhCCHHHHhcC------cccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHh
Confidence 8765432110 01111223479999998752 46678999999999999998 7777642110 0
Q ss_pred ------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 ------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 ------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....+..+.+++.+||+.+|.+||++.+++.+
T Consensus 216 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 216 QGLRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred cCCCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 112345678999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.6e-29 Score=261.05 Aligned_cols=236 Identities=17% Similarity=0.176 Sum_probs=183.8
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
...|++.+.+|.|+ | .||+|... +++.|+||.+..... ..+.+.+|++.+++++||||+++++++...
T Consensus 5 ~~~~~~~~~lg~g~~~--~v~~~~~~-~~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 73 (261)
T cd05068 5 RTSIQLLRKLGAGQFG--EVWEGLWN-NTTPVAVKTLKPGTM---DPKDFLAEAQIMKKLRHPKLIQLYAVCTLE----- 73 (261)
T ss_pred hhheeeEEEecccCCc--cEEEEEec-CCeEEEEEeeCCCcc---cHHHHHHHHHHHHHCCCCCccceeEEEecC-----
Confidence 34699999999998 8 89999975 457899999875432 234578899999999999999999988763
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
...|+||||+ ++|.+++..... .......+..++.|++.||.|||+ .+++||||+|+||+++.+|.+||+|||
T Consensus 74 ---~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~Nil~~~~~~~~l~dfg 148 (261)
T cd05068 74 ---EPIYIVTELMKYGSLLEYLQGGAG-RALKLPQLIDMAAQVASGMAYLEA-QNYIHRDLAARNVLVGENNICKVADFG 148 (261)
T ss_pred ---CCeeeeeecccCCcHHHHHhccCC-CCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCCcceEEEcCCCCEEECCcc
Confidence 3789999999 579999876541 112344456669999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhhh------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR------ 247 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l~------ 247 (771)
++.......... ......+..|+|||+..+ ..++.++|+|||||++|++++ |..|+......
T Consensus 149 ~~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~ 217 (261)
T cd05068 149 LARVIKEDIYEA-----REGAKFPIKWTAPEAALY------NRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQV 217 (261)
T ss_pred eEEEccCCcccc-----cCCCcCceeccCcccccc------CCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence 998765321100 011112347999998865 356778999999999999998 77777432210
Q ss_pred -------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 -------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 -------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
....++..+.+++.+|++.+|.+||++.++++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~ 257 (261)
T cd05068 218 DQGYRMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWK 257 (261)
T ss_pred HcCCCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHH
Confidence 113467889999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.5e-29 Score=265.48 Aligned_cols=240 Identities=16% Similarity=0.192 Sum_probs=185.3
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEEC-----CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEe
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSK-----DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k-----~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~ 90 (771)
...+|.+.+.+|.|+ | +||.+.++ .++..|+||.+... .......+.+|+..+++++||||+++++++..
T Consensus 3 ~~~~~~~~~~lg~G~~~--~v~~~~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 78 (288)
T cd05093 3 KRHNIVLKRELGEGAFG--KVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVE 78 (288)
T ss_pred chHHeeeccccCCcCCe--eEEeeEeccCCCCCcceEEEEEecCCc--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec
Confidence 456799999999998 8 89999853 34567999998753 23345678899999999999999999999876
Q ss_pred cccCcCCcccEEEEEecCC--cchHHHHHHhCC----------CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCC
Q 004157 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGL----------EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLS 158 (771)
Q Consensus 91 e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~----------~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~ 158 (771)
. ..+|+||||+ ++|.+++..... ........+..++.||+.||.|||+ .+++||||||+
T Consensus 79 ~--------~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~-~~i~H~dlkp~ 149 (288)
T cd05093 79 G--------DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS-QHFVHRDLATR 149 (288)
T ss_pred C--------CccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecccCcc
Confidence 3 3789999999 579999876532 1112344566779999999999996 89999999999
Q ss_pred CEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-C
Q 004157 159 SVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-G 237 (771)
Q Consensus 159 NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g 237 (771)
||+++.+|.+||+|||++......... ........+..|+|||++.+ ..++.++|+|||||++|+|++ |
T Consensus 150 Nili~~~~~~kl~dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~------~~~~~~sDiwslG~il~~l~t~g 219 (288)
T cd05093 150 NCLVGENLLVKIGDFGMSRDVYSTDYY----RVGGHTMLPIRWMPPESIMY------RKFTTESDVWSLGVVLWEIFTYG 219 (288)
T ss_pred eEEEccCCcEEeccCCccccccCCcee----ecCCCCCccccccCHHHhcc------CCCCchhhHHHHHHHHHHHHhCC
Confidence 999999999999999998765432110 00001112347999999875 356779999999999999998 7
Q ss_pred CCCCChhhh-------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 238 MRLSKTEEL-------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 238 ~~p~~~~~l-------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.+||..... .....+|..+.+++.+||+.+|.+||++.+++.
T Consensus 220 ~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~ 274 (288)
T cd05093 220 KQPWYQLSNNEVIECITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS 274 (288)
T ss_pred CCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 777643211 112356778999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=5e-29 Score=272.38 Aligned_cols=249 Identities=16% Similarity=0.211 Sum_probs=187.6
Q ss_pred CCCce-ecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchh------------HHHHHHHHHHHHhcCCCCCeeE
Q 004157 18 DLPYN-IGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDG------------HLAAARNGVKRLRTVRHPNILA 83 (771)
Q Consensus 18 ~~~Y~-i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~------------~~~~~~~ei~~Lk~LrHPnIlk 83 (771)
..+|. +.+.||.|+ | +||+|.++.+++.|+||++........ ....+.+|++++++++||||++
T Consensus 7 ~~ry~~~~~~ig~G~~g--~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 84 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYG--KVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMG 84 (335)
T ss_pred ccchhhhhhcccCCCce--eEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceee
Confidence 34565 567799998 8 999999999999999999875432210 1124678999999999999999
Q ss_pred EeeeEEecccCcCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEE
Q 004157 84 FLHSTEVENIDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV 162 (771)
Q Consensus 84 v~d~~e~e~~d~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v 162 (771)
+++++..+ ..+|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||+|+||++
T Consensus 85 ~~~~~~~~--------~~~~lv~e~~~~~l~~~l~~~~~---~~~~~~~~~~~ql~~aL~~LH~-~~i~H~dl~~~nill 152 (335)
T PTZ00024 85 LVDVYVEG--------DFINLVMDIMASDLKKVVDRKIR---LTESQVKCILLQILNGLNVLHK-WYFMHRDLSPANIFI 152 (335)
T ss_pred eeEEEecC--------CcEEEEEeccccCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeecccccHHHeEE
Confidence 99999864 4899999999 678888866432 2334456679999999999996 899999999999999
Q ss_pred cCCCcEEEEccCcccccCCCCCCCC--------CCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHH
Q 004157 163 TQTLDWKLHAFDVLSEFDGNNEAAN--------GPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYEL 234 (771)
Q Consensus 163 ~~~G~~KL~dFgla~~~~~~~~~~~--------~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el 234 (771)
+.+|.+||+|||++........... .............|+|||++.+. ..++.++|+|||||++|+|
T Consensus 153 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~~l~el 227 (335)
T PTZ00024 153 NSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGA-----EKYHFAVDMWSVGCIFAEL 227 (335)
T ss_pred CCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccC-----CCCCcHHHHHHHHHHHHHH
Confidence 9999999999999976652111000 00000111234479999998653 2456789999999999999
Q ss_pred hhCCCCCChhhh----h------------------------------------ccCCCCcchHHHHHHHhccCCCCCCCh
Q 004157 235 FSGMRLSKTEEL----R------------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNS 274 (771)
Q Consensus 235 ~~g~~p~~~~~l----~------------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~ 274 (771)
++|.++|..... . .....+..+.+++.+||+.+|.+||++
T Consensus 228 ~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~ 307 (335)
T PTZ00024 228 LTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISA 307 (335)
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCH
Confidence 999988743210 0 012335668899999999999999999
Q ss_pred HHHhhCCCCCcc
Q 004157 275 SKLIENSEYFQN 286 (771)
Q Consensus 275 ~~lL~~~~fF~n 286 (771)
++++.| +||+.
T Consensus 308 ~~~l~~-~~~~~ 318 (335)
T PTZ00024 308 KEALKH-EYFKS 318 (335)
T ss_pred HHHhcC-cccCC
Confidence 999998 55543
|
|
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.2e-29 Score=259.28 Aligned_cols=232 Identities=15% Similarity=0.233 Sum_probs=180.3
Q ss_pred CCCCCCC-CceEEEEeEECCC-CC--cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCccc
Q 004157 25 DPYPSAW-GSWSHFQGTSKDD-GS--PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKI 100 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~-g~--~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~ 100 (771)
+.||.|+ | +||+|.+..+ +. .|+||.+...... ...+.+.+|++.+++++||||+++++.+.. .
T Consensus 1 ~~ig~g~~~--~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~-------- 68 (257)
T cd05040 1 KKLGDGSFG--VVRRGEWSTSGGKVIPVAVKCLKSDKLS-DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-H-------- 68 (257)
T ss_pred CcCCccCcc--cEEeeeEecCCCCceEEEEeecCCcccH-HHHHHHHHHHHHHhhcCCCCccceeEEEcC-C--------
Confidence 4578887 8 9999998763 32 6899998865443 456788899999999999999999999875 2
Q ss_pred EEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccc
Q 004157 101 TIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (771)
Q Consensus 101 ~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~ 178 (771)
.+|+||||+ ++|.+++..... .......+...+.|++.||.|||+ .+++||||+|+||+++.+|.+||+|||++..
T Consensus 69 ~~~~v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~-~~i~H~di~p~nil~~~~~~~kl~dfg~~~~ 146 (257)
T cd05040 69 PLMMVTELAPLGSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLES-KRFIHRDLAARNILLASDDKVKIGDFGLMRA 146 (257)
T ss_pred eEEEEEEecCCCcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHh-CCccccccCcccEEEecCCEEEecccccccc
Confidence 789999998 589999887542 222344455568999999999996 8999999999999999999999999999987
Q ss_pred cCCCCCCCCCCcccc-ccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChh---hh-------
Q 004157 179 FDGNNEAANGPMLQY-AWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTE---EL------- 246 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~-~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~---~l------- 246 (771)
...... .+... ....+..|+|||...+ ..++.++|+|||||++|+|++ |..|+... +.
T Consensus 147 ~~~~~~----~~~~~~~~~~~~~y~~pE~~~~------~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~ 216 (257)
T cd05040 147 LPQNED----HYVMEEHLKVPFAWCAPESLRT------RTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKE 216 (257)
T ss_pred cccccc----ceecccCCCCCceecCHHHhcc------cCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhc
Confidence 654211 11011 1123347999998865 356778999999999999998 88877321 11
Q ss_pred ----hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 ----RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 ----~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....+|..+.+++.+|+..+|++||++.++++.
T Consensus 217 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~ 254 (257)
T cd05040 217 GERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREF 254 (257)
T ss_pred CCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHH
Confidence 1123467889999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-28 Score=260.59 Aligned_cols=234 Identities=17% Similarity=0.202 Sum_probs=180.7
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEEE
Q 004157 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iyI 104 (771)
.+|.|+ | .||+|+++.++..|+||.+..+.. ...+.+.+|+++++.++||||+++++++... ..+|+
T Consensus 15 ~lg~g~~g--~v~~~~~~~~~~~v~~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--------~~~~l 82 (268)
T cd06624 15 VLGKGTYG--IVYAARDLSTQVRIAIKEIPERDS--RYVQPLHEEIALHSYLKHRNIVQYLGSDSEN--------GFFKI 82 (268)
T ss_pred EEecCCce--EEEEeEecCCCcEEEEEEecCCCH--HHHHHHHHHHHHHHhcCCCCeeeeeeeeccC--------CEEEE
Confidence 577787 7 999999999999999999876432 3456788999999999999999999998763 48999
Q ss_pred EecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC-CCcEEEEccCcccccCC
Q 004157 105 VTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ-TLDWKLHAFDVLSEFDG 181 (771)
Q Consensus 105 VtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~-~G~~KL~dFgla~~~~~ 181 (771)
|+||+ ++|.+++.............+..++.||+.||.|||+ .+++||||+|+||+++. .+.+||+|||++.....
T Consensus 83 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~ 161 (268)
T cd06624 83 FMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHD-NQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAG 161 (268)
T ss_pred EEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHH-CCEeecCCCHHHEEEcCCCCeEEEecchhheeccc
Confidence 99999 5799988764211111233455668999999999996 89999999999999976 78999999999876543
Q ss_pred CCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-----h------hcc-
Q 004157 182 NNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-----L------RNT- 249 (771)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-----l------~~~- 249 (771)
.... ......+..|+|||++.... ..++.++|+||||+++|+|++|.+|+.... . ...
T Consensus 162 ~~~~------~~~~~~~~~~~aPE~~~~~~----~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 231 (268)
T cd06624 162 INPC------TETFTGTLQYMAPEVIDKGP----RGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHP 231 (268)
T ss_pred CCCc------cccCCCCccccChhhhcccc----ccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCC
Confidence 2110 11123445899999975421 235678999999999999999998874311 0 111
Q ss_pred ---CCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 250 ---ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 250 ---~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
..++..+.+++++||+.+|.+||++.+++.|++
T Consensus 232 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~ 267 (268)
T cd06624 232 EIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPF 267 (268)
T ss_pred CCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCC
Confidence 234556888999999999999999999999954
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.9e-29 Score=264.95 Aligned_cols=238 Identities=13% Similarity=0.178 Sum_probs=182.7
Q ss_pred CceecCCCCCCC-CceEEEEeEECC-----CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKD-----DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~-----~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
+|++.+.+|.|+ | +||+|++.. ....|++|.+..... ......+.+|+.+++.++||||+++++.+..+
T Consensus 1 ~~~~~~~lg~g~~g--~vy~~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-- 75 (290)
T cd05045 1 NLVLGKTLGEGEFG--KVVKATAFRLKGRAGYTTVAVKMLKENAS-SSELRDLLSEFNLLKQVNHPHVIKLYGACSQD-- 75 (290)
T ss_pred CccccccccCcCCc--ceEEEEEecCCCCCcceeEEEEecCCCCC-HHHHHHHHHHHHHHhhCCCCCEeeEEEEEecC--
Confidence 488999999998 8 899998753 235688888865432 23456788999999999999999999998764
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCC---------------------CCCcHHHHHHHHHHHHHHHHHHHcCCCc
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLE---------------------GSQRDEYYAWGLNQIAKAVSFLNNDCKL 150 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~---------------------~~~~~~~i~~gl~QI~~aL~fLH~~~~i 150 (771)
...|+|+||+ ++|.+++...... .......+..++.|++.||.|||+ .++
T Consensus 76 ------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~i 148 (290)
T cd05045 76 ------GPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAE-MKL 148 (290)
T ss_pred ------CCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHH-CCe
Confidence 3689999999 5799888753211 112234466779999999999996 999
Q ss_pred eecCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHH
Q 004157 151 VHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCL 230 (771)
Q Consensus 151 vH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~l 230 (771)
+||||+|+||+++.++.+||+|||+++........ ........+..|+|||...+ ..++.++|+|||||+
T Consensus 149 vH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~----~~~~~~~~~~~y~apE~~~~------~~~~~~~Di~slG~~ 218 (290)
T cd05045 149 VHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSY----VKRSKGRIPVKWMAIESLFD------HIYTTQSDVWSFGVL 218 (290)
T ss_pred ehhhhhhheEEEcCCCcEEeccccccccccCccch----hcccCCCCCccccCHHHHcc------CCcchHhHHHHHHHH
Confidence 99999999999999999999999998765432110 00111223457999998765 356678999999999
Q ss_pred HHHHhh-CCCCCChhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 231 IYELFS-GMRLSKTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 231 i~el~~-g~~p~~~~~l~-------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
+|+|++ |..|+...... ....++..+..++.+||+.+|.+||++.++++
T Consensus 219 l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~ 281 (290)
T cd05045 219 LWEIVTLGGNPYPGIAPERLFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISK 281 (290)
T ss_pred HHHHHhcCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 999998 87776532211 12346678999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.9e-29 Score=262.25 Aligned_cols=238 Identities=15% Similarity=0.177 Sum_probs=185.7
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCC---CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDD---GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~---g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~ 92 (771)
....|++.+.+|.|+ | .||+|++... ...|+||.+..... ....+.+.+|+.++++++||||++++++++.+
T Consensus 4 ~~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~v~ik~~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~- 79 (270)
T cd05056 4 QREDITLGRCIGEGQFG--DVYQGVYMSPENEKIAVAVKTCKNCTS-PSVREKFLQEAYIMRQFDHPHIVKLIGVITEN- 79 (270)
T ss_pred chhhceeeeeeCCccce--eEEEEEEecCCCCCcceEEEecCCcCC-HHHHHHHHHHHHHHHhCCCCchhceeEEEcCC-
Confidence 345699999999998 8 9999997654 35789999875432 33456788999999999999999999988742
Q ss_pred cCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEE
Q 004157 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL 170 (771)
..|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||+|+||+++.++.+||
T Consensus 80 --------~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~lH~-~~~~H~dl~p~nili~~~~~~~l 148 (270)
T cd05056 80 --------PVWIVMELAPLGELRSYLQVNKY--SLDLASLILYSYQLSTALAYLES-KRFVHRDIAARNVLVSSPDCVKL 148 (270)
T ss_pred --------CcEEEEEcCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHh-CCeeccccChheEEEecCCCeEE
Confidence 578999999 579999876432 12344566779999999999996 99999999999999999999999
Q ss_pred EccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh---
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL--- 246 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l--- 246 (771)
+|||++........ +.......+..|+|||.+.. ..++.++|+|||||++|++++ |..||.....
T Consensus 149 ~d~g~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~ 217 (270)
T cd05056 149 GDFGLSRYLEDESY-----YKASKGKLPIKWMAPESINF------RRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDV 217 (270)
T ss_pred ccCceeeecccccc-----eecCCCCccccccChhhhcc------CCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHH
Confidence 99999876644211 11111122347999998765 356788999999999999986 8887743211
Q ss_pred ----------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 ----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 ----------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....+|..+.+++.+|+..+|.+||++.+++..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~ 261 (270)
T cd05056 218 IGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQ 261 (270)
T ss_pred HHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 1124567889999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4e-29 Score=269.49 Aligned_cols=237 Identities=14% Similarity=0.177 Sum_probs=182.5
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcE--EEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPV--SIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENID 94 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~V--aIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d 94 (771)
.+|++.+.||.|+ | +||+|.++.++..+ +||.+... ........+.+|++.++++ +||||++++++++.+
T Consensus 7 ~~~~~~~~lg~G~~g--~V~~a~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~--- 80 (303)
T cd05088 7 NDIKFQDVIGEGNFG--QVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR--- 80 (303)
T ss_pred hhceeeeeecCCCCc--eEEEEEEccCCceeeEEEEEeccc-CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCC---
Confidence 3689999999998 8 99999998887654 66665532 2223456788899999999 899999999998764
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCC-------------CCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCC
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEG-------------SQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSS 159 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~-------------~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~N 159 (771)
..+|+||||+ ++|.+++....... ......+..++.||+.||.|||+ .+++||||||+|
T Consensus 81 -----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~-~gi~H~dlkp~N 154 (303)
T cd05088 81 -----GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ-KQFIHRDLAARN 154 (303)
T ss_pred -----CCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHh-CCccccccchhe
Confidence 3789999999 57999997653211 12344566779999999999996 999999999999
Q ss_pred EEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CC
Q 004157 160 VVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GM 238 (771)
Q Consensus 160 I~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~ 238 (771)
|+++.++.+||+|||++....... .......+..|+|||+..+ ..++.++|+|||||++|||++ |.
T Consensus 155 ili~~~~~~kl~dfg~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~ellt~g~ 221 (303)
T cd05088 155 ILVGENYVAKIADFGLSRGQEVYV-------KKTMGRLPVRWMAIESLNY------SVYTTNSDVWSYGVLLWEIVSLGG 221 (303)
T ss_pred EEecCCCcEEeCccccCcccchhh-------hcccCCCcccccCHHHHhc------cCCcccccchhhhhHHHHHHhcCC
Confidence 999999999999999986432110 0111112347999998865 346678999999999999998 88
Q ss_pred CCCChhhh-------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 239 RLSKTEEL-------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 239 ~p~~~~~l-------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.||..... .....++..+.+++.+|++.+|..||++.+++.+
T Consensus 222 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 222 TPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred CCcccCChHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 77743211 1112467788999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=267.27 Aligned_cols=241 Identities=15% Similarity=0.132 Sum_probs=188.5
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
.-|+..+.+|.|+ | +||+|+++.+|..|+||++..... .......+.+|+++++.++||||+++++++..+
T Consensus 25 ~~f~~~~~lg~G~~~--~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----- 97 (317)
T cd06635 25 KLFTDLREIGHGSFG--AVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLRE----- 97 (317)
T ss_pred hhhhhhheeccCCCe--EEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeC-----
Confidence 3488888999997 7 999999999999999999975432 224456788899999999999999999999864
Q ss_pred CcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 97 ~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
...|+||||+ ++|.+.+...... .....+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||+
T Consensus 98 ---~~~~lv~e~~~g~l~~~~~~~~~~--l~~~~~~~i~~~i~~~l~~lH~-~~i~H~dL~p~Nil~~~~~~~kl~dfg~ 171 (317)
T cd06635 98 ---HTAWLVMEYCLGSASDLLEVHKKP--LQEVEIAAITHGALQGLAYLHS-HNMIHRDIKAGNILLTEPGQVKLADFGS 171 (317)
T ss_pred ---CeEEEEEeCCCCCHHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCcccEEECCCCCEEEecCCC
Confidence 3789999999 6677776543321 2344566679999999999996 8999999999999999999999999998
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h----
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R---- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~---- 247 (771)
+....... .......|+|||++...- ....+.++|+|||||++|+|++|..|+..... .
T Consensus 172 ~~~~~~~~----------~~~~~~~y~aPE~~~~~~---~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~ 238 (317)
T cd06635 172 ASIASPAN----------SFVGTPYWMAPEVILAMD---EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ 238 (317)
T ss_pred ccccCCcc----------cccCCccccChhhhhcCC---CCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHh
Confidence 86543211 112344799999974210 12456789999999999999999987643211 0
Q ss_pred ------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 ------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 ------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
....++..+.+++.+||+.+|..||++.++++|.+++.
T Consensus 239 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 282 (317)
T cd06635 239 NESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLR 282 (317)
T ss_pred ccCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhc
Confidence 01235567889999999999999999999999965554
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=4e-29 Score=274.02 Aligned_cols=243 Identities=16% Similarity=0.178 Sum_probs=184.8
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECC-----CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEE
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKD-----DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTE 89 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~-----~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e 89 (771)
+..+|++.+.||.|+ | .||.|.+.. +++.|+||++...... ...+.+.+|+..++++ +||||+++++++.
T Consensus 5 ~~~~~~i~~~lG~G~fg--~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~-~~~~~~~~E~~~~~~l~~h~niv~~~~~~~ 81 (337)
T cd05054 5 PRDRLKLGKPLGRGAFG--KVIQASAFGIEKSASCRTVAVKMLKEGATA-SEYKALMTELKILIHIGHHLNVVNLLGACT 81 (337)
T ss_pred CHHHhhhhcccccCcCc--eEEeccccccccccccceeeeeeccCCCCH-HHHHHHHHHHHHHHhhccCcchhheeeeEe
Confidence 456799999999998 9 999997543 4578999999754322 3456678899999999 7999999999886
Q ss_pred ecccCcCCcccEEEEEecCC--cchHHHHHHhCCC---------------------------------------------
Q 004157 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLE--------------------------------------------- 122 (771)
Q Consensus 90 ~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~--------------------------------------------- 122 (771)
.+ ...+|+++||+ ++|.++|......
T Consensus 82 ~~-------~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (337)
T cd05054 82 KP-------GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLS 154 (337)
T ss_pred cC-------CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchh
Confidence 53 24789999999 5798888643210
Q ss_pred -------------CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCC
Q 004157 123 -------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGP 189 (771)
Q Consensus 123 -------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~ 189 (771)
.......+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|||++..+......
T Consensus 155 ~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~-~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~---- 229 (337)
T cd05054 155 DVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLAS-RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY---- 229 (337)
T ss_pred hcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCcceEEEeCCCcEEEeccccchhcccCcch----
Confidence 012233456678999999999996 89999999999999999999999999999876432110
Q ss_pred ccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChh----hh----h------ccCCCCc
Q 004157 190 MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTE----EL----R------NTASIPK 254 (771)
Q Consensus 190 ~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~----~l----~------~~~~IP~ 254 (771)
........+..|+|||++.+ ..++.++|+|||||++|||++ |..||... .+ . ....++.
T Consensus 230 ~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (337)
T cd05054 230 VRKGDARLPLKWMAPESIFD------KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATP 303 (337)
T ss_pred hhccCCCCCccccCcHHhcC------CCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCH
Confidence 00111122347999998866 367789999999999999997 88777431 11 0 0123456
Q ss_pred chHHHHHHHhccCCCCCCChHHHhhC
Q 004157 255 SLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 255 ~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.+.+++.+||+.+|.+||++.+++++
T Consensus 304 ~~~~l~~~cl~~~p~~RPs~~ell~~ 329 (337)
T cd05054 304 EIYSIMLDCWHNNPEDRPTFSELVEI 329 (337)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHH
Confidence 78899999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-28 Score=266.39 Aligned_cols=240 Identities=16% Similarity=0.166 Sum_probs=186.8
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
-|...+++|.|+ | +||+|++..+|..|+||++...... ......+.+|++.++.++||||++++++++..
T Consensus 22 ~~~~~~~lg~g~~g--~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------ 93 (313)
T cd06633 22 IFVGLHEIGHGSFG--AVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKE------ 93 (313)
T ss_pred HhhcceeeccCCCe--EEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeC------
Confidence 367777899987 7 9999999999999999999864332 23445678899999999999999999999874
Q ss_pred cccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
...|+||||+ ++|.+.+...... .....+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||++
T Consensus 94 --~~~~lv~e~~~~~l~~~l~~~~~~--l~~~~~~~~~~qi~~al~~LH~-~gi~H~dl~p~nili~~~~~~kL~dfg~~ 168 (313)
T cd06633 94 --HTAWLVMEYCLGSASDLLEVHKKP--LQEVEIAAITHGALQGLAYLHS-HNMIHRDIKAGNILLTEPGQVKLADFGSA 168 (313)
T ss_pred --CEEEEEEecCCCCHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHH-CCeecCCCChhhEEECCCCCEEEeecCCC
Confidence 4889999999 6677777654321 2344466679999999999996 89999999999999999999999999987
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h-----
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R----- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~----- 247 (771)
....... .......|+|||++...- ...++.++|+|||||++|+|++|.+|+...+. .
T Consensus 169 ~~~~~~~----------~~~~~~~y~aPE~~~~~~---~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~ 235 (313)
T cd06633 169 SKSSPAN----------SFVGTPYWMAPEVILAMD---EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN 235 (313)
T ss_pred cccCCCC----------CccccccccChhhccccC---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc
Confidence 6432210 112344799999974210 12456789999999999999999987643221 0
Q ss_pred -----ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 -----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 -----~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||+.+|.+||++.+++.| +||+.
T Consensus 236 ~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~-~~~~~ 278 (313)
T cd06633 236 DSPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRH-DFVRR 278 (313)
T ss_pred CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC-cccCC
Confidence 012355678999999999999999999999998 56644
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.2e-29 Score=272.16 Aligned_cols=246 Identities=19% Similarity=0.250 Sum_probs=188.2
Q ss_pred CceecCCCCCCC-CceEEEEeEECCC--CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDD--GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDA 95 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~--g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d~ 95 (771)
+|++.+.||.|. | .||.++++.+ +..|+||++..........+.+.+|+.++++++ ||||+++++........
T Consensus 1 ~y~~~~~lg~G~~g--~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~- 77 (332)
T cd07857 1 RYELIKELGQGAYG--IVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGN- 77 (332)
T ss_pred CceEEEEccccCCe--EEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeecccc-
Confidence 589999999998 8 9999999988 899999998754333334566788999999995 99999999976542111
Q ss_pred CCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 96 ~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
...+|+++|++ .+|...+..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 78 ---~~~~~~~~e~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~-~givH~dlkp~Nili~~~~~~kl~Dfg 150 (332)
T cd07857 78 ---FNELYLYEELMEADLHQIIRSGQP---LTDAHFQSFIYQILCGLKYIHS-ANVLHRDLKPGNLLVNADCELKICDFG 150 (332)
T ss_pred ---CCcEEEEEecccCCHHHHHhcCCC---CCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHeEEcCCCCEEeCcCC
Confidence 34789999999 578888865432 2334466679999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh--------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------- 246 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-------- 246 (771)
++........... .......++..|+|||+..+. ..++.++|+|||||++|++++|.+||...+.
T Consensus 151 ~a~~~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~-----~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~ 223 (332)
T cd07857 151 LARGFSENPGENA--GFMTEYVATRWYRAPEIMLSF-----QSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQIL 223 (332)
T ss_pred Cceeccccccccc--ccccCcccCccccCcHHHhCC-----CCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHH
Confidence 9986653221110 001122345589999987642 3456789999999999999999988753210
Q ss_pred -----------------------h------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 247 -----------------------R------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 247 -----------------------~------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
. ....++..+.+++.+||+.+|.+||++.+++.|++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~ 294 (332)
T cd07857 224 QVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPY 294 (332)
T ss_pred HHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChh
Confidence 0 01134567889999999999999999999999843
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.8e-29 Score=278.27 Aligned_cols=241 Identities=17% Similarity=0.157 Sum_probs=183.8
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCC-----CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEE
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDD-----GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTE 89 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~-----g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e 89 (771)
+..+|++++.||.|+ | +||+|++... +..|+||++.... .....+.+.+|+++|++|. ||||+++++++.
T Consensus 35 ~~~~~~~~~~LG~G~fG--~Vy~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~ 111 (400)
T cd05105 35 PRDGLVLGRILGSGAFG--KVVEGTAYGLSRSQPVMKVAVKMLKPTA-RSSEKQALMSELKIMTHLGPHLNIVNLLGACT 111 (400)
T ss_pred cccceehhheecCCCCc--eEEEEEEcccCCCCCceEEEEEecCCCC-ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEc
Confidence 456799999999998 8 9999987533 3469999997543 3334567889999999996 999999999997
Q ss_pred ecccCcCCcccEEEEEecCC--cchHHHHHHhCCC---------------------------------------------
Q 004157 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLE--------------------------------------------- 122 (771)
Q Consensus 90 ~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~--------------------------------------------- 122 (771)
.. ..+||||||| ++|.++|......
T Consensus 112 ~~--------~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (400)
T cd05105 112 KS--------GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQA 183 (400)
T ss_pred cC--------CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccc
Confidence 63 3799999999 6898888653200
Q ss_pred ------------------------------------------------CCCcHHHHHHHHHHHHHHHHHHHcCCCceecC
Q 004157 123 ------------------------------------------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGN 154 (771)
Q Consensus 123 ------------------------------------------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~d 154 (771)
.......+..++.||+.||.|||+ .+++|||
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~ivH~d 262 (400)
T cd05105 184 DTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLAS-KNCVHRD 262 (400)
T ss_pred cccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh-CCeeCCC
Confidence 011222345668999999999996 8999999
Q ss_pred CCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHH
Q 004157 155 VCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYEL 234 (771)
Q Consensus 155 Ikp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el 234 (771)
|||+||+++.++.+||+|||++......... ........+..|+|||++.+ ..++.++|+|||||++|||
T Consensus 263 ikp~Nill~~~~~~kL~DfGla~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~------~~~~~~~DiwSlGvil~el 332 (400)
T cd05105 263 LAARNVLLAQGKIVKICDFGLARDIMHDSNY----VSKGSTFLPVKWMAPESIFD------NLYTTLSDVWSYGILLWEI 332 (400)
T ss_pred CChHhEEEeCCCEEEEEeCCcceeccccccc----cccCCcCCCcceEChhhhcC------CCCCchhhHHHHHHHHHHH
Confidence 9999999999999999999998765432110 00111223457999999865 3567899999999999999
Q ss_pred hh-CCCCCChhh----h----------hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 235 FS-GMRLSKTEE----L----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 235 ~~-g~~p~~~~~----l----------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
++ |..|+.... . .....+|..+.+++.+||+.+|+.||++.++.+
T Consensus 333 lt~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 392 (400)
T cd05105 333 FSLGGTPYPGMIVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD 392 (400)
T ss_pred HHCCCCCCcccchhHHHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence 97 777664311 0 112356778999999999999999999988765
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-28 Score=262.83 Aligned_cols=241 Identities=16% Similarity=0.195 Sum_probs=183.4
Q ss_pred CCCceecCCCCCCC-CceEEEEeEE----CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTS----KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~----k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~ 92 (771)
+..|++.+.+|.|+ | +||.|.. ..++..|+||++... .....+.+.+|++++++++||||+++++++...+
T Consensus 3 ~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 78 (284)
T cd05081 3 ERHLKFIQQLGKGNFG--SVELCRYDPLQDNTGEVVAVKKLQHS--TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG 78 (284)
T ss_pred cccceeeeeccCCCCc--eEEEEEecCCcCCCCcEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCC
Confidence 45799999999998 8 8999874 457889999998753 2334567889999999999999999999876443
Q ss_pred cCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEE
Q 004157 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL 170 (771)
...+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||
T Consensus 79 ------~~~~~lv~e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~~l~~aL~~LH~-~~i~H~dlkp~nili~~~~~~~l 149 (284)
T cd05081 79 ------RRNLRLVMEYLPYGSLRDYLQKHRE--RLDHRKLLLYASQICKGMEYLGS-KRYVHRDLATRNILVESENRVKI 149 (284)
T ss_pred ------CCceEEEEEecCCCCHHHHHHhcCc--CCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCHhhEEECCCCeEEE
Confidence 34789999999 589999876431 12233455668999999999996 89999999999999999999999
Q ss_pred EccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-----
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----- 245 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----- 245 (771)
+|||++.......... ........+..|+|||+..+ ..++.++|+|||||++|||++|..++....
T Consensus 150 ~dfg~~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~ 220 (284)
T cd05081 150 GDFGLTKVLPQDKEYY---KVREPGESPIFWYAPESLTE------SKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMR 220 (284)
T ss_pred CCCcccccccCCCcce---eecCCCCCceEeeCHHHhcc------CCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhh
Confidence 9999998764321100 00011112336999999865 356778999999999999999764432110
Q ss_pred ------------------h------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 246 ------------------L------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 246 ------------------l------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
+ .....+|..+.+++.+|+..+|..||++.+++..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 279 (284)
T cd05081 221 MMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQ 279 (284)
T ss_pred hcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 0 0113466789999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=263.94 Aligned_cols=242 Identities=14% Similarity=0.142 Sum_probs=185.1
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCC----------------CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCC
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDG----------------SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHP 79 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g----------------~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHP 79 (771)
..-+|++.+.||.|+ | .||.|++...+ ..|++|.+...... ...+.+.+|++++++++||
T Consensus 3 ~~~~~~~~~~lg~G~~g--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~ 79 (296)
T cd05051 3 PRQPLNFVEKLGEGQFG--EVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASD-NAREDFLKEVKILSRLSDP 79 (296)
T ss_pred chhhCcccccccCCCCc--cEEEEEeccCCcccccccccccccCCceeEEEEEecCccCH-HHHHHHHHHHHHHHhcCCC
Confidence 345799999999998 8 89998876544 46899998764333 4566788999999999999
Q ss_pred CeeEEeeeEEecccCcCCcccEEEEEecCC--cchHHHHHHhCCC--------CCCcHHHHHHHHHHHHHHHHHHHcCCC
Q 004157 80 NILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLE--------GSQRDEYYAWGLNQIAKAVSFLNNDCK 149 (771)
Q Consensus 80 nIlkv~d~~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~--------~~~~~~~i~~gl~QI~~aL~fLH~~~~ 149 (771)
||+++++++..+ ...|+|||++ ++|..++...... .......+..++.|++.||.|||+ .+
T Consensus 80 ~i~~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~-~~ 150 (296)
T cd05051 80 NIARLLGVCTVD--------PPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLES-LN 150 (296)
T ss_pred CEeEEEEEEecC--------CCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHH-cC
Confidence 999999998764 3789999999 5799988765411 122344566779999999999996 89
Q ss_pred ceecCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHH
Q 004157 150 LVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGC 229 (771)
Q Consensus 150 ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~ 229 (771)
++||||||+||+++.++.+||+|||++.......... .......+..|+|||++.+ ..++.++|+|||||
T Consensus 151 i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~ 220 (296)
T cd05051 151 FVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYR----VQGRAPLPIRWMAWESVLL------GKFTTKSDVWAFGV 220 (296)
T ss_pred ccccccchhceeecCCCceEEccccceeecccCccee----ecCcCCCCceecCHHHhhc------CCCCccchhhhhHH
Confidence 9999999999999999999999999987654321100 0111122347999999875 35678999999999
Q ss_pred HHHHHhh--CCCCCChh---h-hh----------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 230 LIYELFS--GMRLSKTE---E-LR----------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 230 li~el~~--g~~p~~~~---~-l~----------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
++|||++ +..|+... + +. ....+|..+.+++.+||+.+|.+||++.++++.
T Consensus 221 ~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~ 293 (296)
T cd05051 221 TLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLF 293 (296)
T ss_pred HHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHH
Confidence 9999998 44554321 1 11 112346789999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.8e-29 Score=259.60 Aligned_cols=236 Identities=17% Similarity=0.180 Sum_probs=183.6
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
+....|++.++||.|+ | .||+|..+ +++.|+||.+...... ...+.+|+..+++++||||+++++++..
T Consensus 3 ~~~~~~~~~~~ig~G~~g--~v~~~~~~-~~~~~a~K~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~---- 72 (260)
T cd05067 3 VPRETLKLVKKLGAGQFG--EVWMGYYN-GHTKVAIKSLKQGSMS---PEAFLAEANLMKQLQHPRLVRLYAVVTQ---- 72 (260)
T ss_pred cchHHceeeeeeccCccc--eEEeeecC-CCceEEEEEecCCCCc---HHHHHHHHHHHHhcCCcCeeeEEEEEcc----
Confidence 3456799999999998 8 99999865 6789999998754332 3467889999999999999999988743
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
..+|+||||+ ++|.+++...... ......+..++.|++.||.|||+ .+++||||+|+||+++.++.++|+|
T Consensus 73 -----~~~~~v~e~~~~~~L~~~~~~~~~~-~~~~~~~~~i~~~i~~al~~LH~-~~i~H~dl~p~ni~i~~~~~~~l~d 145 (260)
T cd05067 73 -----EPIYIITEYMENGSLVDFLKTPEGI-KLTINKLIDMAAQIAEGMAFIER-KNYIHRDLRAANILVSETLCCKIAD 145 (260)
T ss_pred -----CCcEEEEEcCCCCCHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHhc-CCeecccccHHhEEEcCCCCEEEcc
Confidence 2689999999 5799888654321 12233455568999999999996 9999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh-----
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL----- 246 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l----- 246 (771)
||++......... .......+..|+|||++.. ..++.++|+|||||++|++++ |..||.....
T Consensus 146 fg~~~~~~~~~~~-----~~~~~~~~~~y~~pe~~~~------~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~ 214 (260)
T cd05067 146 FGLARLIEDNEYT-----AREGAKFPIKWTAPEAINY------GTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQ 214 (260)
T ss_pred CcceeecCCCCcc-----cccCCcccccccCHHHhcc------CCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHH
Confidence 9998766532110 0111122347999999875 356678999999999999998 8888753211
Q ss_pred --------hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 247 --------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 247 --------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.....+|..+.+++.+|++.+|++||++++++.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 215 NLERGYRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred HHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 111346678999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-29 Score=278.84 Aligned_cols=236 Identities=17% Similarity=0.190 Sum_probs=187.3
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
...++++||+|. | +||+|.+- ..||||+++.....+..++.++||+..||+-||-||+-|.+++-..
T Consensus 393 ev~l~~rIGsGsFG--tV~Rg~wh---GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p------- 460 (678)
T KOG0193|consen 393 EVLLGERIGSGSFG--TVYRGRWH---GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP------- 460 (678)
T ss_pred Hhhccceecccccc--ceeecccc---cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC-------
Confidence 345788999998 9 99999985 4799999998888888999999999999999999999999999763
Q ss_pred ccEEEEEecCCc--chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
.+.|||.+|+ +|+.+|....- ......+..++.||++|+.|||. .+|||+|||..|||+.+++.+||+|||++
T Consensus 461 --~~AIiTqwCeGsSLY~hlHv~et--kfdm~~~idIAqQiaqGM~YLHA-K~IIHrDLKSnNIFl~~~~kVkIgDFGLa 535 (678)
T KOG0193|consen 461 --PLAIITQWCEGSSLYTHLHVQET--KFDMNTTIDIAQQIAQGMDYLHA-KNIIHRDLKSNNIFLHEDLKVKIGDFGLA 535 (678)
T ss_pred --ceeeeehhccCchhhhhccchhh--hhhHHHHHHHHHHHHHhhhhhhh-hhhhhhhccccceEEccCCcEEEecccce
Confidence 3599999994 69988865431 11122355679999999999997 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL---------- 246 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l---------- 246 (771)
+...--... ..+.. ..+-..|||||++.-. + ...+++.+|+|+|||++|||++|.-|+..+..
T Consensus 536 tvk~~w~g~--~q~~q--p~gsilwmAPEvIRmq-d--~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG 608 (678)
T KOG0193|consen 536 TVKTRWSGE--QQLEQ--PHGSLLWMAPEVIRMQ-D--DNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRG 608 (678)
T ss_pred eeeeeeccc--cccCC--CccchhhhcHHHHhhc-c--cCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEeccc
Confidence 754321000 00100 1112379999999732 1 24678899999999999999999988753221
Q ss_pred -------hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 247 -------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 247 -------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
....+.|+++.+++..|+..+++.||.+.++|.
T Consensus 609 ~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 609 YLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred ccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 122467889999999999999999999999876
|
|
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=266.19 Aligned_cols=244 Identities=15% Similarity=0.143 Sum_probs=189.8
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCC-CchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTN-AQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~-~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
+...|+..+.+|.|+ | +||+|+++.+++.|+||.+.... ........+.+|+++++.++||||+++++++...
T Consensus 13 ~~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--- 87 (308)
T cd06634 13 PEKLFSDLREIGHGSFG--AVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE--- 87 (308)
T ss_pred cHHHHHHHHheeeCCCE--EEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcC---
Confidence 455688888999987 7 99999999999999999987532 2223455677899999999999999999998863
Q ss_pred cCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 95 ATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
...|+||||+ ++|.+.+..... ......+..++.|++.||.|||+ .+++||||+|+||+++.+|.+||+||
T Consensus 88 -----~~~~lv~e~~~~~l~~~~~~~~~--~l~~~~~~~~~~~l~~~l~~LH~-~~i~H~dl~p~nil~~~~~~~kl~df 159 (308)
T cd06634 88 -----HTAWLVMEYCLGSASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLHS-HNMIHRDVKAGNILLSEPGLVKLGDF 159 (308)
T ss_pred -----CeeEEEEEccCCCHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHhEEECCCCcEEECCc
Confidence 3789999999 567776654332 12344566779999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----hh--
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LR-- 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----l~-- 247 (771)
|++....... .......|+|||++.+.- ....+.++|+|||||++|+|++|..|+.... ..
T Consensus 160 g~~~~~~~~~----------~~~~~~~y~aPE~~~~~~---~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~ 226 (308)
T cd06634 160 GSASIMAPAN----------XFVGTPYWMAPEVILAMD---EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI 226 (308)
T ss_pred ccceeecCcc----------cccCCccccCHHHHhhcc---cCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHH
Confidence 9987654311 112345799999974310 0235678999999999999999998764321 00
Q ss_pred --------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 --------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 --------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||..+|.+||++.++++|.++...
T Consensus 227 ~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~ 273 (308)
T cd06634 227 AQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 273 (308)
T ss_pred hhcCCCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcccccc
Confidence 112466778899999999999999999999999655543
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.4e-29 Score=263.57 Aligned_cols=240 Identities=17% Similarity=0.192 Sum_probs=183.3
Q ss_pred CceecCCCCCCC-CceEEEEeEE----CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTS----KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~----k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
-|++.+.||+|+ | .||.+.. +.++..|+||.+.... .......+.+|++++++++||||+++++++...+
T Consensus 5 ~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-- 79 (284)
T cd05079 5 FLKRIRDLGEGHFG--KVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDG-- 79 (284)
T ss_pred hhhhceecCCCCce--eEEEEEEccCCCCccceEEEEEcCccc-cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCC--
Confidence 378999999998 8 8998873 5678899999987543 2344567899999999999999999999987653
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
...+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|
T Consensus 80 ----~~~~~lv~e~~~g~~L~~~l~~~~~--~~~~~~~~~i~~~i~~aL~~lH~-~gi~H~dlkp~Nil~~~~~~~~l~d 152 (284)
T cd05079 80 ----GNGIKLIMEFLPSGSLKEYLPRNKN--KINLKQQLKYAVQICKGMDYLGS-RQYVHRDLAARNVLVESEHQVKIGD 152 (284)
T ss_pred ----CCceEEEEEccCCCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHH-CCeeecccchheEEEcCCCCEEECC
Confidence 24789999999 579998866432 12334456679999999999996 8999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh--------
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-------- 244 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~-------- 244 (771)
||++........... .......+..|+|||+..+ ..++.++|+|||||++|+++++..+....
T Consensus 153 fg~~~~~~~~~~~~~---~~~~~~~~~~y~apE~~~~------~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~ 223 (284)
T cd05079 153 FGLTKAIETDKEYYT---VKDDLDSPVFWYAPECLIQ------SKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMI 223 (284)
T ss_pred CccccccccCcccee---ecCCCCCCccccCHHHhcc------CCCCccccchhhhhhhhhhhcCCCCCccccchhhhhc
Confidence 999887643211000 0011122347999998765 35667899999999999999865432110
Q ss_pred -----h---------------hhccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 245 -----E---------------LRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 245 -----~---------------l~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
. ......++..+.+++.+||+.+|.+||++.+++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 224 GPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG 279 (284)
T ss_pred ccccccccHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 0 00123466789999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.8e-29 Score=262.50 Aligned_cols=243 Identities=17% Similarity=0.187 Sum_probs=187.9
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCC----CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEec
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDD----GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~----g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e 91 (771)
...+|++.+.||.|+ | .||.|.++.+ +..|++|.+... ........+.+|+.++++|+||||+++++++..+
T Consensus 4 ~~~~~~~~~~i~~g~~g--~V~~~~~~~~~~~~~~~v~~k~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~ 80 (280)
T cd05043 4 SRDRVTLSDLLQEGTFG--RIFYGILIDEKPGKEEEVFVKTVKDH-ASEIQVTLLLQESCLLYGLSHQNILPILHVCIED 80 (280)
T ss_pred chhheEEeeeecccCCc--eEEEEEEecCCCCceeEEEEEEccCC-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence 346799999999998 8 9999998762 578999987643 3334567788999999999999999999987653
Q ss_pred ccCcCCcccEEEEEecCC--cchHHHHHHhCCC-----CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC
Q 004157 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLE-----GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ 164 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~-----~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~ 164 (771)
....|+++|++ ++|.+++...... .......+..++.||+.||.|||+ .+++||||+|+||+++.
T Consensus 81 -------~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~i~H~di~p~nil~~~ 152 (280)
T cd05043 81 -------GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHK-RGVIHKDIAARNCVIDE 152 (280)
T ss_pred -------CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHH-CCEeecccCHhhEEEcC
Confidence 23679999998 5799998765322 223344566779999999999996 89999999999999999
Q ss_pred CCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCCh
Q 004157 165 TLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKT 243 (771)
Q Consensus 165 ~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~ 243 (771)
++.+||+|||+++.+...... ...........|+|||++.+ ..++.++|+|||||++||+++ |..|+..
T Consensus 153 ~~~~kl~d~g~~~~~~~~~~~----~~~~~~~~~~~y~apE~~~~------~~~~~~~Di~slG~~l~el~~~g~~p~~~ 222 (280)
T cd05043 153 ELQVKITDNALSRDLFPMDYH----CLGDNENRPVKWMALESLVN------KEYSSASDVWSFGVLLWELMTLGQTPYVE 222 (280)
T ss_pred CCcEEECCCCCcccccCCceE----EeCCCCCcchhccCHHHHhc------CCCCchhhHHHhHHHHHHHhcCCCCCcCc
Confidence 999999999999765432110 00011122347999999865 356788999999999999998 8887753
Q ss_pred hh---h----------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 244 EE---L----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 244 ~~---l----------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.. + .....+|..+.+++.+|+..+|++||++.++++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~ 272 (280)
T cd05043 223 IDPFEMAAYLKDGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQC 272 (280)
T ss_pred CCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 21 1 1113457889999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=258.24 Aligned_cols=236 Identities=17% Similarity=0.182 Sum_probs=184.7
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
...+|++.+.||.|+ | +||+|..+ ++..|+||.+...... ...+.+|+..+++++||||++++++++.+
T Consensus 4 ~~~~~~i~~~ig~g~~~--~v~~~~~~-~~~~~~vK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---- 73 (261)
T cd05034 4 PRESLKLERKLGAGQFG--EVWMGTWN-GTTKVAVKTLKPGTMS---PEAFLQEAQIMKKLRHDKLVQLYAVCSEE---- 73 (261)
T ss_pred chhheeeeeeeccCcce--EEEEEEEc-CCceEEEEEecCCccC---HHHHHHHHHHHhhCCCCCEeeeeeeeecC----
Confidence 456799999999998 8 99999976 5678999998754332 34678899999999999999999998763
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+|+|||++ ++|.+++..... .......+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+||
T Consensus 74 ----~~~~~v~e~~~~~~L~~~i~~~~~-~~~~~~~~~~~~~~i~~al~~lh~-~~i~h~di~p~nili~~~~~~~l~d~ 147 (261)
T cd05034 74 ----EPIYIVTEYMSKGSLLDFLKSGEG-KKLRLPQLVDMAAQIAEGMAYLES-RNYIHRDLAARNILVGENLVCKIADF 147 (261)
T ss_pred ----CceEEEEeccCCCCHHHHHhcccc-CCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCcchheEEEcCCCCEEECcc
Confidence 3789999999 579998876431 112344466779999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh----h-
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL----R- 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l----~- 247 (771)
|++........ ........+..|+|||...+ ..++.++|+|||||++|++++ |..||..... .
T Consensus 148 g~~~~~~~~~~-----~~~~~~~~~~~y~~PE~~~~------~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~ 216 (261)
T cd05034 148 GLARLIEDDEY-----TAREGAKFPIKWTAPEAANY------GRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQ 216 (261)
T ss_pred ccceeccchhh-----hhhhccCCCccccCHHHhcc------CCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 99876643110 00111122347999999876 356678999999999999998 7777743221 1
Q ss_pred --------ccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 248 --------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 248 --------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.....|..+.+++.+||..+|.+||++.++++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 217 VERGYRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred HHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 11235778999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=258.13 Aligned_cols=231 Identities=18% Similarity=0.261 Sum_probs=184.4
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
...|++.+.+|.|. | .||+|... |+.|+||.+..... ..+.+.+|+.++++++||||+++++.+..+
T Consensus 5 ~~~~~~~~~ig~g~~g--~v~~~~~~--~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----- 72 (256)
T cd05039 5 SKELKLGATIGKGEFG--DVMLGDYR--GQKVAVKCLKDDST---AAQAFLAEASVMTTLRHPNLVQLLGVVLQG----- 72 (256)
T ss_pred hhhccceeeeecCCCc--eEEEEEec--CcEEEEEEeccchh---HHHHHHHHHHHHHhcCCcceeeeEEEEcCC-----
Confidence 34689999999998 8 99999875 89999999975432 456788999999999999999999998763
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
...|+||||+ ++|.++++..... ......+..++.|++.||.|||+ .+++||||+|+||+++.+|.+||+|||
T Consensus 73 ---~~~~~v~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lh~-~~i~H~di~p~Nili~~~~~~~l~d~g 147 (256)
T cd05039 73 ---NPLYIVTEYMAKGSLVDYLRSRGRA-VITLAQQLGFALDVCEGMEYLEE-KNFVHRDLAARNVLVSEDLVAKVSDFG 147 (256)
T ss_pred ---CCeEEEEEecCCCcHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHh-CCccchhcccceEEEeCCCCEEEcccc
Confidence 3789999999 4799998765421 12344566679999999999996 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhhh------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR------ 247 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l~------ 247 (771)
++........ ....+..|+|||.+... .++.++|+|||||++|++++ |..|+......
T Consensus 148 ~~~~~~~~~~---------~~~~~~~~~ape~~~~~------~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~ 212 (256)
T cd05039 148 LAKEASQGQD---------SGKLPVKWTAPEALREK------KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHV 212 (256)
T ss_pred cccccccccc---------cCCCcccccCchhhcCC------cCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence 9987643111 11223479999988652 45678999999999999997 77776432211
Q ss_pred -------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 -------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 -------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
....+|..+.+++.+||..+|.+||++.+++..
T Consensus 213 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 252 (256)
T cd05039 213 EKGYRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQ 252 (256)
T ss_pred hcCCCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence 113467889999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=264.56 Aligned_cols=247 Identities=15% Similarity=0.138 Sum_probs=185.3
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEeccc
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENI 93 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~ 93 (771)
+.-..|++.+.+|.|. | +||+|+++.+++.|+||.+........ ...+..|+..+..+. ||||+++++++..+
T Consensus 12 ~~~~~~~~~~~lg~g~~~--~v~~~~~~~~~~~~avK~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~-- 86 (296)
T cd06618 12 ADLNDLENLGEIGSGTCG--QVYKMRFKKTGHVMAVKQMRRTGNKEE-NKRILMDLDVVLKSHDCPYIVKCYGYFITD-- 86 (296)
T ss_pred CCcchheeeeEeeccCCe--EEEEEEECCCCeEEEEEEEeccCChHH-HHHHHHHHHHHHhccCCCchHhhheeeecC--
Confidence 3445799999999997 7 999999999999999999986543332 334455666666665 99999999999863
Q ss_pred CcCCcccEEEEEecCCc-chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 94 DATSTKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
..+|+||||+. .|...+..... ......+..++.||+.||.|||+..+++||||+|+||+++.+|.+||+|
T Consensus 87 ------~~~~~v~e~~~~~l~~l~~~~~~--~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~d 158 (296)
T cd06618 87 ------SDVFICMELMSTCLDKLLKRIQG--PIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCD 158 (296)
T ss_pred ------CeEEEEeeccCcCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECc
Confidence 47999999995 45555544321 2233445567999999999999646999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-----hh
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-----LR 247 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-----l~ 247 (771)
||++........ .........|+|||.+.+.-. ...++.++|+|||||++|+|++|..||.... +.
T Consensus 159 fg~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~--~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~ 229 (296)
T cd06618 159 FGISGRLVDSKA-------KTRSAGCAAYMAPERIDPPDP--NPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLT 229 (296)
T ss_pred cccchhccCCCc-------ccCCCCCccccCHhhcCCCCC--ccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHH
Confidence 999876543211 111123347999999864210 1235678999999999999999998875411 10
Q ss_pred -----------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 -----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 -----------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
....++..+.+++.+||+.+|.+||++.++++| +||.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~-~~~~ 277 (296)
T cd06618 230 KILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH-PFIR 277 (296)
T ss_pred HHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC-hhhh
Confidence 001356778999999999999999999999998 4443
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-28 Score=256.26 Aligned_cols=235 Identities=17% Similarity=0.237 Sum_probs=185.3
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCC----CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDG----SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g----~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
+++.+.+|.|+ | .||.+++...+ ..|++|++...... .....+.+|++.++.++||||+++++.+...
T Consensus 1 ~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---- 73 (258)
T smart00219 1 LTLGKKLGEGAFG--EVYKGTLKGLSGEKEVEVAVKTLKEDADE-QQIEEFLREARIMRKLDHPNIVKLLGVCTEE---- 73 (258)
T ss_pred CcccceeccCCCc--ceEEEEecCCCCCCCceEEEEEccCCCCh-HHHHHHHHHHHHHHhcCCCchheEEEEEcCC----
Confidence 46788999998 8 89999998766 89999999654322 2567888999999999999999999999864
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
...|++||++ ++|.+++....... .....+..++.||+.||.|||+ .+++||||+|+||+++.+|.++|+||
T Consensus 74 ----~~~~~i~e~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~ql~~~l~~lh~-~~~~h~dl~~~nil~~~~~~~~l~df 147 (258)
T smart00219 74 ----EPLMIVMEYMEGGDLLDYLRKNRPKE-LSLSDLLSFALQIARGMEYLES-KNFIHRDLAARNCLVGENLVVKISDF 147 (258)
T ss_pred ----CeeEEEEeccCCCCHHHHHHhhhhcc-CCHHHHHHHHHHHHHHHHHHhc-CCeeecccccceEEEccCCeEEEccc
Confidence 3789999999 57998887643211 2344566779999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL------ 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l------ 246 (771)
|++.......... ......+..|++||...+ ..++.++|+|+|||++|+|++ |.+|+.....
T Consensus 148 g~~~~~~~~~~~~-----~~~~~~~~~y~~Pe~~~~------~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~ 216 (258)
T smart00219 148 GLSRDLYDDDYYK-----KKGGKLPIRWMAPESLKD------GKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEY 216 (258)
T ss_pred CCceecccccccc-----cccCCCcccccChHHhcc------CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 9997765431110 001123458999998854 356789999999999999998 6677643211
Q ss_pred -------hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 247 -------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 247 -------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.....+|..+.+++.+||+.+|.+||++.++++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 217 LKKGYRLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred HhcCCCCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 112346788999999999999999999999875
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-28 Score=261.80 Aligned_cols=237 Identities=19% Similarity=0.233 Sum_probs=186.8
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|.-.+.||.|. | .||+|.++.+++.|+||+++.... ...+.+.+|+.+++.++||||+++++++...
T Consensus 20 ~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~------- 88 (285)
T cd06648 20 YLDNFVKIGEGSTG--IVCIATDKSTGRQVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHPNIVEMYSSYLVG------- 88 (285)
T ss_pred hhhcceEeccCCCe--EEEEEEECCCCCEEEEEEEeccch--hHHHHHHHHHHHHHHcCCCChheEEEEEEcC-------
Confidence 455556888887 7 999999999999999999875322 2345678999999999999999999998763
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
.+.|+|+||+ ++|.+++..... ....+..++.||+.||.|||+ .+++||||+|+||+++.+|.++|+|||++
T Consensus 89 -~~~~~v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~ql~~~l~~lH~-~~i~H~dl~p~Nil~~~~~~~~l~d~g~~ 162 (285)
T cd06648 89 -DELWVVMEFLEGGALTDIVTHTRM----NEEQIATVCLAVLKALSFLHA-QGVIHRDIKSDSILLTSDGRVKLSDFGFC 162 (285)
T ss_pred -CeEEEEEeccCCCCHHHHHHhCCC----CHHHHHHHHHHHHHHHHHHHh-CCeecCCCChhhEEEcCCCcEEEcccccc
Confidence 4889999999 479888877332 334456669999999999996 89999999999999999999999999988
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL---------- 246 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l---------- 246 (771)
......... .........|+|||...+ ..++.++|+|||||++|+|++|..||...+.
T Consensus 163 ~~~~~~~~~------~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~ 230 (285)
T cd06648 163 AQVSKEVPR------RKSLVGTPYWMAPEVISR------LPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDN 230 (285)
T ss_pred hhhccCCcc------cccccCCccccCHHHhcC------CCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhc
Confidence 755331110 111233457999999865 3466789999999999999999988743211
Q ss_pred -----hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 247 -----RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 247 -----~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
.....++..+.+++.+||+.+|.+||++.++++| +||.+
T Consensus 231 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~-~~~~~ 274 (285)
T cd06648 231 LPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNH-PFLAK 274 (285)
T ss_pred CCCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHccC-ccccc
Confidence 1112366789999999999999999999999998 56643
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=264.52 Aligned_cols=240 Identities=14% Similarity=0.163 Sum_probs=182.3
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCC--------------CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCe
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDG--------------SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNI 81 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g--------------~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnI 81 (771)
+..+|++.++||.|+ | .||.+++...+ ..|+||.+..... ......+.+|++.+++++||||
T Consensus 3 ~~~~~~~~~~lg~G~~g--~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~ei~~l~~l~h~~i 79 (295)
T cd05097 3 PRQQLRLKEKLGEGQFG--EVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVT-KTARNDFLKEIKIMSRLKNPNI 79 (295)
T ss_pred chHhCeehhccCCCCCc--eEEecccccchhhccccCcccCCCceEEEEEecCCCCC-HHHHHHHHHHHHHHHhCCCCCc
Confidence 456799999999999 8 89999875432 2489999875432 3345678899999999999999
Q ss_pred eEEeeeEEecccCcCCcccEEEEEecCC--cchHHHHHHhCCC---------CCCcHHHHHHHHHHHHHHHHHHHcCCCc
Q 004157 82 LAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLE---------GSQRDEYYAWGLNQIAKAVSFLNNDCKL 150 (771)
Q Consensus 82 lkv~d~~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~---------~~~~~~~i~~gl~QI~~aL~fLH~~~~i 150 (771)
+++++++... ..+|+||||+ ++|.+++...... .......+..++.||+.||.|||+ .++
T Consensus 80 ~~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~-~~i 150 (295)
T cd05097 80 IRLLGVCVSD--------DPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLAS-LNF 150 (295)
T ss_pred CeEEEEEcCC--------CccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHh-cCe
Confidence 9999999763 3789999999 4798888654311 012334466679999999999996 899
Q ss_pred eecCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccc-cccCCCCCChhccccccccccCCCCCcchHHHHHH
Q 004157 151 VHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYA-WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGC 229 (771)
Q Consensus 151 vH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~-~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~ 229 (771)
+||||||+||+++.++.+||+|||++........ ..... ...+..|+|||+..+ ..++.++|+|||||
T Consensus 151 ~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwSlG~ 219 (295)
T cd05097 151 VHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDY-----YRIQGRAVLPIRWMAWESILL------GKFTTASDVWAFGV 219 (295)
T ss_pred eccccChhhEEEcCCCcEEecccccccccccCcc-----eeccCcCcCceeecChhhhcc------CCcCchhhHHHHHH
Confidence 9999999999999999999999999876543211 00111 122347999998765 35678999999999
Q ss_pred HHHHHhh--CCCCCChh---h-h-----------h-----ccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 230 LIYELFS--GMRLSKTE---E-L-----------R-----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 230 li~el~~--g~~p~~~~---~-l-----------~-----~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
++|+|++ +..+|... . . . ....+|..+.+++.+|+..+|.+||++.++++
T Consensus 220 ~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 220 TLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred HHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 9999998 44455321 1 0 0 01235778999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.8e-29 Score=262.85 Aligned_cols=237 Identities=18% Similarity=0.222 Sum_probs=184.7
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccCcCCc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d~~~~ 98 (771)
|++.+.||.|+ | +||+|+.+.+++.|+||.+....... ......+|+..+++++ ||||+++++.++..
T Consensus 1 y~~~~~ig~g~~g--~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~------- 70 (283)
T cd07830 1 YKVIKQLGDGTFG--SVYLARNKETGELVAIKKMKKKFYSW-EECMNLREVKSLRKLNEHPNIVKLKEVFREN------- 70 (283)
T ss_pred CeeheeeccCCce--EEEEEEECCCCcEEEEEEehhhccch-hHHHHHHHHHHHHhccCCCCchhHHHHhhcC-------
Confidence 78899999998 8 99999999899999999987643322 2223456899999999 99999999999863
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
...|+||||+ ++|.+++..... .......+..++.||+.+|.|||+ ++++|+||+|+||+++.+|.++|+|||++.
T Consensus 71 -~~~~lv~e~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~-~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~ 147 (283)
T cd07830 71 -DELYFVFEYMEGNLYQLMKDRKG-KPFSESVIRSIIYQILQGLAHIHK-HGFFHRDLKPENLLVSGPEVVKIADFGLAR 147 (283)
T ss_pred -CcEEEEEecCCCCHHHHHHhccc-ccCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCChhhEEEcCCCCEEEeecccce
Confidence 4889999999 578888876541 112344466679999999999996 899999999999999999999999999987
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R------ 247 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~------ 247 (771)
....... .........|+|||++... ..++.++|+||||+++|+|++|.++|..... .
T Consensus 148 ~~~~~~~-------~~~~~~~~~~~aPE~~~~~-----~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~ 215 (283)
T cd07830 148 EIRSRPP-------YTDYVSTRWYRAPEILLRS-----TSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVL 215 (283)
T ss_pred eccCCCC-------cCCCCCcccccCceeeecC-----cCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhc
Confidence 6643211 1112334579999987543 3456789999999999999999887742110 0
Q ss_pred --------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 248 --------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 248 --------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
.....+..+.+++.+|+..+|.+||++.+++.|++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~ 282 (283)
T cd07830 216 GTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPY 282 (283)
T ss_pred CCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCC
Confidence 00123466889999999999999999999999843
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-28 Score=261.25 Aligned_cols=239 Identities=15% Similarity=0.194 Sum_probs=184.3
Q ss_pred CCCceecCCCCCCC-CceEEEEeEEC-----CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEec
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSK-----DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k-----~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e 91 (771)
..+|.+.+++|.|+ | +||.+... .++..|++|.+... .......+.+|++.++.++||||+++++++...
T Consensus 4 ~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 79 (280)
T cd05092 4 RRDIVLKWELGEGAFG--KVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTVLQHQHIVRFYGVCTEG 79 (280)
T ss_pred hHhceeccccCCccCC--eEEEeEEecCCCCCCceEEEEEecCcC--CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecC
Confidence 45688899999998 8 99999743 34678999987643 234456789999999999999999999998763
Q ss_pred ccCcCCcccEEEEEecCC--cchHHHHHHhCCC------------CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCC
Q 004157 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLE------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCL 157 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp 157 (771)
...|+||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++||||||
T Consensus 80 --------~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~-~~i~H~dlkp 150 (280)
T cd05092 80 --------RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLAS-LHFVHRDLAT 150 (280)
T ss_pred --------CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHH-CCeecccccH
Confidence 3789999999 5799988764311 112234466679999999999996 9999999999
Q ss_pred CCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-
Q 004157 158 SSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS- 236 (771)
Q Consensus 158 ~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~- 236 (771)
+||+++.++.+||+|||++.......... .......+..|+|||+..+ ..++.++|+|||||++|||++
T Consensus 151 ~nil~~~~~~~kL~dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~el~~~ 220 (280)
T cd05092 151 RNCLVGQGLVVKIGDFGMSRDIYSTDYYR----VGGRTMLPIRWMPPESILY------RKFTTESDIWSFGVVLWEIFTY 220 (280)
T ss_pred hhEEEcCCCCEEECCCCceeEcCCCceee----cCCCccccccccCHHHhcc------CCcCchhhHHHHHHHHHHHHcC
Confidence 99999999999999999987654321000 0011122457999998876 356788999999999999998
Q ss_pred CCCCCChhh-------------hhccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 237 GMRLSKTEE-------------LRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 237 g~~p~~~~~-------------l~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
|.+||.... ......+|..+.+++.+||..+|.+||++.+++.
T Consensus 221 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 221 GKQPWYQLSNTEAIECITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred CCCCCccCCHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 777763211 1112457888999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=260.21 Aligned_cols=230 Identities=13% Similarity=0.176 Sum_probs=176.5
Q ss_pred CCCCCC-CceEEEEeEECCCCC--cEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccCcCCcccE
Q 004157 26 PYPSAW-GSWSHFQGTSKDDGS--PVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDATSTKIT 101 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~~g~--~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d~~~~~~~ 101 (771)
.+|.|+ | .||+|+.+.++. .+++|.+.... .....+.+.+|++.++++ +||||+++++.++.. ..
T Consensus 2 ~lg~g~~g--~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~--------~~ 70 (270)
T cd05047 2 VIGEGNFG--QVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR--------GY 70 (270)
T ss_pred cCCCCCCc--eEEEEEEcCCCCeeEEEEEEccccC-CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecC--------CC
Confidence 578887 8 999999988876 45778776322 223456788999999999 799999999999764 36
Q ss_pred EEEEecCC--cchHHHHHHhCCC-------------CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC
Q 004157 102 IYIVTEPV--MPLSEKIKELGLE-------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL 166 (771)
Q Consensus 102 iyIVtE~v--~~L~~~L~~~~~~-------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G 166 (771)
+|+||||+ ++|.+++...... .......+.+++.|++.||.|||+ .+++||||||+||+++.++
T Consensus 71 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~-~~i~H~dikp~nili~~~~ 149 (270)
T cd05047 71 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ-KQFIHRDLAARNILVGENY 149 (270)
T ss_pred ceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHH-CCEeecccccceEEEcCCC
Confidence 89999999 5899999764321 112345577789999999999996 9999999999999999999
Q ss_pred cEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhh
Q 004157 167 DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE 245 (771)
Q Consensus 167 ~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~ 245 (771)
.+||+|||++....... .......+..|+|||+..+ ..++.++|+|||||++|||++ |..||....
T Consensus 150 ~~kl~dfgl~~~~~~~~-------~~~~~~~~~~y~apE~~~~------~~~~~~~Di~slG~il~el~~~g~~pf~~~~ 216 (270)
T cd05047 150 VAKIADFGLSRGQEVYV-------KKTMGRLPVRWMAIESLNY------SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT 216 (270)
T ss_pred eEEECCCCCccccchhh-------hccCCCCccccCChHHHcc------CCCCchhhHHHHHHHHHHHHcCCCCCccccC
Confidence 99999999975332110 0111112346999998865 356779999999999999997 887774321
Q ss_pred h-------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 246 L-------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 246 l-------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
. .....++..+.+++.+|+..+|.+||++.+++..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 264 (270)
T cd05047 217 CAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 264 (270)
T ss_pred HHHHHHHHhCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 1 1123456778999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-28 Score=259.51 Aligned_cols=238 Identities=17% Similarity=0.182 Sum_probs=183.6
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCC---cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGS---PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~---~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
.+|++++.+|.|. | .||+|+++.++. .|+||.+..... +...+.+.+|+..+++++||||+++++++..+
T Consensus 4 ~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--- 77 (267)
T cd05066 4 SCIKIEKVIGAGEFG--EVCSGRLKLPGKREIPVAIKTLKAGYT-EKQRRDFLSEASIMGQFDHPNIIHLEGVVTKS--- 77 (267)
T ss_pred HHeEeeeeecccCCC--ceEEEEEecCCCCceEEEEEECCCCCC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEecC---
Confidence 4689999999998 8 899999875554 699999875432 33456788999999999999999999998753
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
...|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|
T Consensus 78 -----~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~-~~i~h~dlkp~nili~~~~~~~l~d 149 (267)
T cd05066 78 -----KPVMIVTEYMENGSLDAFLRKHDG--QFTVIQLVGMLRGIASGMKYLSD-MGYVHRDLAARNILVNSNLVCKVSD 149 (267)
T ss_pred -----CccEEEEEcCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH-CCEeehhhchhcEEECCCCeEEeCC
Confidence 3789999999 479998876532 12333455668999999999996 8999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh-----
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL----- 246 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l----- 246 (771)
||++......... .........+..|++||++.+ ..++.++|+|+|||++|++++ |..|+.....
T Consensus 150 fg~~~~~~~~~~~---~~~~~~~~~~~~y~~pe~~~~------~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~ 220 (267)
T cd05066 150 FGLSRVLEDDPEA---AYTTRGGKIPIRWTAPEAIAY------RKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIK 220 (267)
T ss_pred CCcccccccccce---eeecCCCccceeecCHhHhcc------CccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHH
Confidence 9999876542110 000111112237999999875 356779999999999999886 8877643211
Q ss_pred --------hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 247 --------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 247 --------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.....+|..+.+++.+|++.+|.+||++.++++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 221 AIEEGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred HHhCCCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 111345778999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-28 Score=258.52 Aligned_cols=239 Identities=15% Similarity=0.188 Sum_probs=183.3
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCC---cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGS---PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~---~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
..|+..+.+|.|+ | .||+|+.+.++. .|+||++..... ....+.+.+|++.+++++||||+++++++...
T Consensus 5 ~~~~~~~~lg~g~~g--~vy~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--- 78 (268)
T cd05063 5 SHITKQKVIGAGEFG--EVFRGILKMPGRKEVAVAIKTLKPGYT-EKQRQDFLSEASIMGQFSHHNIIRLEGVVTKF--- 78 (268)
T ss_pred HHceEeeEecCCCCc--cEEEEEEecCCCCceEEEEEeccccCC-HHHHHHHHHHHHHHhcCCCCCeeEEEEEEccC---
Confidence 3688899999997 7 899999987665 689998865432 33456788999999999999999999999763
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
..+|+||||+ ++|.+++..... ......+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|
T Consensus 79 -----~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~al~~lH~-~~i~H~dlkp~Nili~~~~~~kl~d 150 (268)
T cd05063 79 -----KPAMIITEYMENGALDKYLRDHDG--EFSSYQLVGMLRGIAAGMKYLSD-MNYVHRDLAARNILVNSNLECKVSD 150 (268)
T ss_pred -----CCcEEEEEcCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH-CCeeccccchhhEEEcCCCcEEECC
Confidence 3789999999 479888876431 12233345568999999999996 8999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhh----hh
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE----LR 247 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~----l~ 247 (771)
||++.......... ........+..|+|||++.+ ..++.++|+|||||++||+++ |..|+.... ..
T Consensus 151 fg~~~~~~~~~~~~---~~~~~~~~~~~y~~PE~~~~------~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~ 221 (268)
T cd05063 151 FGLSRVLEDDPEGT---YTTSGGKIPIRWTAPEAIAY------RKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMK 221 (268)
T ss_pred Cccceecccccccc---eeccCCCcCceecCHHHhhc------CCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHH
Confidence 99987664321110 00111112336999998865 356678999999999999987 887764211 11
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 ---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 ---------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
....+|..+.+++.+|+..+|..||+..++++.
T Consensus 222 ~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~ 263 (268)
T cd05063 222 AINDGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNL 263 (268)
T ss_pred HHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 113457788999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=258.71 Aligned_cols=235 Identities=17% Similarity=0.169 Sum_probs=180.7
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
+.-+|++.+.||.|+ | +||+|.+..+ ..|+||.+..... ..+.+.+|++++++++||||+++++++..
T Consensus 4 ~~~~~~~~~~ig~g~~~--~v~~~~~~~~-~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----- 72 (260)
T cd05069 4 PRESLRLDVKLGQGCFG--EVWMGTWNGT-TKVAIKTLKPGTM---MPEAFLQEAQIMKKLRHDKLVPLYAVVSE----- 72 (260)
T ss_pred ChHHeeeeeeecCcCCC--eEEEEEEcCC-ceEEEEEcccCCc---cHHHHHHHHHHHHhCCCCCeeeEEEEEcC-----
Confidence 345799999999998 8 9999987654 4699998764322 23567889999999999999999988753
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
...|+||||+ ++|.+++...... ......+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+||
T Consensus 73 ----~~~~~v~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~l~~al~~lH~-~~i~H~dl~~~Nill~~~~~~~l~df 146 (260)
T cd05069 73 ----EPIYIVTEFMGKGSLLDFLKEGDGK-YLKLPQLVDMAAQIADGMAYIER-MNYIHRDLRAANILVGDNLVCKIADF 146 (260)
T ss_pred ----CCcEEEEEcCCCCCHHHHHhhCCCC-CCCHHHHHHHHHHHHHHHHHHHh-CCEeecccCcceEEEcCCCeEEECCC
Confidence 2579999999 4799998764321 12334456669999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL------ 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l------ 246 (771)
|++......... .......+..|++||+..+ ..++.++|+|||||++|++++ |..|+.....
T Consensus 147 g~~~~~~~~~~~-----~~~~~~~~~~y~~Pe~~~~------~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~ 215 (260)
T cd05069 147 GLARLIEDNEYT-----ARQGAKFPIKWTAPEAALY------GRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQ 215 (260)
T ss_pred ccceEccCCccc-----ccCCCccchhhCCHHHhcc------CCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 999765432110 0111123347999998765 356678999999999999998 7777643211
Q ss_pred -h------ccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 247 -R------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 247 -~------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
. ....+|..+.+++.+||..+|.+||++.++++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 216 VERGYRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred HHcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 0 11346778999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=259.13 Aligned_cols=231 Identities=18% Similarity=0.256 Sum_probs=177.7
Q ss_pred CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHH-HHhcCCCCCeeEEeeeEEecccCcCCcccE
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVK-RLRTVRHPNILAFLHSTEVENIDATSTKIT 101 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~-~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~ 101 (771)
+.+|.|. | .||+|+++.+|+.|+||++.+..... ........|.. ..+.++||||+++++.++.. ..
T Consensus 2 ~~l~~g~~~--~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~--------~~ 71 (260)
T cd05611 2 KPISKGAFG--SVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSK--------DY 71 (260)
T ss_pred ccCCcCCCe--eEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcC--------Ce
Confidence 4678887 8 99999999999999999997543211 22223344444 34556899999999999863 48
Q ss_pred EEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccccc
Q 004157 102 IYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (771)
Q Consensus 102 iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~ 179 (771)
+|+||||+ ++|..+++.... .....+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+|||++...
T Consensus 72 ~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~aL~~lH~-~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 147 (260)
T cd05611 72 LYLVMEYLNGGDCASLIKTLGG---LPEDWAKQYIAEVVLGVEDLHQ-RGIIHRDIKPENLLIDQTGHLKLTDFGLSRNG 147 (260)
T ss_pred EEEEEeccCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeEECCCCcEEEeecccceec
Confidence 99999999 579998876542 2344566779999999999996 89999999999999999999999999988754
Q ss_pred CCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh------------
Q 004157 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------------ 247 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------------ 247 (771)
.... .......|++||...+. .++.++|+|+||+++|++++|..|+......
T Consensus 148 ~~~~----------~~~~~~~y~~pe~~~~~------~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 211 (260)
T cd05611 148 LENK----------KFVGTPDYLAPETILGV------GDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRIN 211 (260)
T ss_pred cccc----------cCCCCcCccChhhhcCC------CCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccC
Confidence 3210 11233479999998763 4667999999999999999999887532211
Q ss_pred ----ccCCCCcchHHHHHHHhccCCCCCCCh---HHHhhCCCCCcc
Q 004157 248 ----NTASIPKSLLPDYQRLLSSMPSRRLNS---SKLIENSEYFQN 286 (771)
Q Consensus 248 ----~~~~IP~~l~~~i~~lL~~~P~~Rps~---~~lL~~~~fF~n 286 (771)
....+|..+.+++.+||+.+|..||++ .+++.| +||.+
T Consensus 212 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~-~~~~~ 256 (260)
T cd05611 212 WPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSH-PFFKS 256 (260)
T ss_pred CCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcC-hHhhc
Confidence 012468889999999999999999954 788888 55543
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-28 Score=265.75 Aligned_cols=242 Identities=16% Similarity=0.231 Sum_probs=183.3
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEEC-------CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeee
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSK-------DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHS 87 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k-------~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~ 87 (771)
+..+|.+++.||.|+ | .||.|+.. ..+..|++|.+..... ......+.+|+++++.+ +||||++++++
T Consensus 10 ~~~~~~~~~~lg~G~~g--~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 86 (314)
T cd05099 10 PRDRLVLGKPLGEGCFG--QVVRAEAYGIDKSRPDQTVTVAVKMLKDNAT-DKDLADLISEMELMKLIGKHKNIINLLGV 86 (314)
T ss_pred cHHHeeeeeeecCCCcc--cEEEeeecccCCccCCcceEEEEEecCCCCC-hHHHHHHHHHHHHHHhccCCCCeeeEEEE
Confidence 445799999999998 8 89999753 2345799999875433 23456788899999999 69999999999
Q ss_pred EEecccCcCCcccEEEEEecCC--cchHHHHHHhCCC-------------CCCcHHHHHHHHHHHHHHHHHHHcCCCcee
Q 004157 88 TEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLE-------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVH 152 (771)
Q Consensus 88 ~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~-------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH 152 (771)
+... ..+|+||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++|
T Consensus 87 ~~~~--------~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~-~gi~H 157 (314)
T cd05099 87 CTQE--------GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLES-RRCIH 157 (314)
T ss_pred EccC--------CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHH-CCeee
Confidence 8753 3789999999 5799999764310 112233355568999999999996 89999
Q ss_pred cCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHH
Q 004157 153 GNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIY 232 (771)
Q Consensus 153 ~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~ 232 (771)
|||||+||+++.+|.+||+|||+++.......... ......+..|+|||++.+ ..++.++|+|||||++|
T Consensus 158 ~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~------~~~~~~~DiwslG~~l~ 227 (314)
T cd05099 158 RDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKK----TSNGRLPVKWMAPEALFD------RVYTHQSDVWSFGILMW 227 (314)
T ss_pred ccccceeEEEcCCCcEEEccccccccccccccccc----cccCCCCccccCHHHHcc------CCcCccchhhHHHHHHH
Confidence 99999999999999999999999986643211000 011112246999999865 35677899999999999
Q ss_pred HHhh-CCCCCChhhh-------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 233 ELFS-GMRLSKTEEL-------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 233 el~~-g~~p~~~~~l-------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
++++ |..||..... .....+|..+.+++.+||+.+|..||++.++++.
T Consensus 228 el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 289 (314)
T cd05099 228 EIFTLGGSPYPGIPVEELFKLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEA 289 (314)
T ss_pred HHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 9998 6666643211 1123456789999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=265.58 Aligned_cols=241 Identities=15% Similarity=0.231 Sum_probs=183.6
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECC-------CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeE
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKD-------DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHST 88 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~-------~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~ 88 (771)
..+|.+++.||+|+ | .||.+.++. ++..|++|.+.... .......+.+|+..++++ +||||+++++++
T Consensus 17 ~~~~~i~~~lg~G~~g--~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (307)
T cd05098 17 RDRLVLGKPLGEGCFG--QVVMAEAIGLDKEKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKNIINLLGAC 93 (307)
T ss_pred hHHeEEeeeeccCCCe--eEEEeEEeccCCcccCccceEEEEeccCCC-ChHHHHHHHHHHHHHHHhcCCCCEeeEEEEE
Confidence 35699999999998 8 899998643 23569999987542 233456688899999999 799999999998
Q ss_pred EecccCcCCcccEEEEEecCC--cchHHHHHHhCCC-------------CCCcHHHHHHHHHHHHHHHHHHHcCCCceec
Q 004157 89 EVENIDATSTKITIYIVTEPV--MPLSEKIKELGLE-------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHG 153 (771)
Q Consensus 89 e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~-------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~ 153 (771)
... ..+|+||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++||
T Consensus 94 ~~~--------~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~-~gi~H~ 164 (307)
T cd05098 94 TQD--------GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLAS-KKCIHR 164 (307)
T ss_pred ecC--------CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH-CCcccc
Confidence 764 3789999999 5899999764321 112234456679999999999996 899999
Q ss_pred CCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHH
Q 004157 154 NVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYE 233 (771)
Q Consensus 154 dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~e 233 (771)
||||+||+++.++.+||+|||++........... ......+..|+|||++.+ ..++.++|+|||||++|+
T Consensus 165 dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~------~~~~~~~DvwslG~~l~e 234 (307)
T cd05098 165 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK----TTNGRLPVKWMAPEALFD------RIYTHQSDVWSFGVLLWE 234 (307)
T ss_pred cccHHheEEcCCCcEEECCCcccccccccchhhc----cccCCCccceeChHHhcc------CCCCcHHHHHHHHHHHHH
Confidence 9999999999999999999999876543211000 011112247999998865 356678999999999999
Q ss_pred Hhh-CCCCCChhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 234 LFS-GMRLSKTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 234 l~~-g~~p~~~~~l~-------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
|++ |..|+...... ....++..+.+++.+||..+|.+||++.++++.
T Consensus 235 l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~ 295 (307)
T cd05098 235 IFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 295 (307)
T ss_pred HHcCCCCCCCcCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 998 66666432211 113456788999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-28 Score=257.90 Aligned_cols=235 Identities=16% Similarity=0.163 Sum_probs=181.8
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
....|++.+++|.|+ | +||+|... ++..|++|.+...... .+.+++|+.++++++||||+++++.+..
T Consensus 4 ~~~~~~~~~~ig~g~~~--~v~~~~~~-~~~~~~~k~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~~----- 72 (260)
T cd05070 4 PRESLQLIKKLGNGQFG--EVWMGTWN-GNTKVAVKTLKPGTMS---PESFLEEAQIMKKLRHDKLVQLYAVVSE----- 72 (260)
T ss_pred chHHhhhhheeccccCc--eEEEEEec-CCceeEEEEecCCCCC---HHHHHHHHHHHHhcCCCceEEEEeEECC-----
Confidence 345799999999998 8 99999876 6678999998764332 3458899999999999999999998753
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+|+||||+ ++|.+++...... ......+..++.|++.||.|||+ .+++||||+|+||+++.++..||+||
T Consensus 73 ----~~~~lv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~l~~al~~lH~-~~i~H~di~p~Nili~~~~~~~l~df 146 (260)
T cd05070 73 ----EPIYIVTEYMSKGSLLDFLKDGEGR-ALKLPNLVDMAAQVAAGMAYIER-MNYIHRDLRSANILVGDGLVCKIADF 146 (260)
T ss_pred ----CCcEEEEEecCCCcHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCccceEEEeCCceEEeCCc
Confidence 2579999999 4799988764321 12334456669999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh----h-
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL----R- 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l----~- 247 (771)
|++......... .......+..|+|||+..+ ..++.++|+|||||++|++++ |.+||..... .
T Consensus 147 g~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~ 215 (260)
T cd05070 147 GLARLIEDNEYT-----ARQGAKFPIKWTAPEAALY------GRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQ 215 (260)
T ss_pred eeeeeccCcccc-----cccCCCCCccccChHHHhc------CCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence 999765432110 0111223447999998765 356679999999999999998 7777743221 1
Q ss_pred --------ccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 248 --------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 248 --------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.....|..+.+++.+|+..+|.+||++.++.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 216 VERGYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred HHcCCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 11235677899999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.4e-29 Score=267.91 Aligned_cols=236 Identities=18% Similarity=0.225 Sum_probs=186.5
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|.....||.|+ | .||.+.+..++..|+||++.... ....+.+.+|+..++.++||||+++++.+...
T Consensus 23 ~~~~~~~lg~g~~g--~v~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~------- 91 (292)
T cd06658 23 YLDSFIKIGEGSTG--IVCIATEKHTGKQVAVKKMDLRK--QQRRELLFNEVVIMRDYHHENVVDMYNSYLVG------- 91 (292)
T ss_pred HHhhhhcccCCCCe--EEEEEEECCCCCEEEEEEEecch--HHHHHHHHHHHHHHHhCCCCcHHHHHHheecC-------
Confidence 466667889888 8 89999999999999999987532 23456688999999999999999999998763
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
...|+||||+ ++|.+++..... ....+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+|||++
T Consensus 92 -~~~~lv~e~~~~~~L~~~~~~~~l----~~~~~~~~~~qi~~~l~~LH~-~~ivH~dlkp~Nill~~~~~~kL~dfg~~ 165 (292)
T cd06658 92 -DELWVVMEFLEGGALTDIVTHTRM----NEEQIATVCLSVLRALSYLHN-QGVIHRDIKSDSILLTSDGRIKLSDFGFC 165 (292)
T ss_pred -CeEEEEEeCCCCCcHHHHHhcCCC----CHHHHHHHHHHHHHHHHHHHH-CCEeecCCCHHHEEEcCCCCEEEccCcch
Confidence 4889999999 468887755332 234466779999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h-----
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R----- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~----- 247 (771)
......... ......+..|+|||+..+ ..++.++|+|||||++||+++|..|+..... .
T Consensus 166 ~~~~~~~~~------~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~ 233 (292)
T cd06658 166 AQVSKEVPK------RKSLVGTPYWMAPEVISR------LPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDN 233 (292)
T ss_pred hhccccccc------CceeecCccccCHHHHcc------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Confidence 765432110 111233458999999865 3566789999999999999999988753221 0
Q ss_pred ------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 ------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 ------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
....++..+..++.+|+..+|.+||++.++++| +||.
T Consensus 234 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~-~~~~ 276 (292)
T cd06658 234 LPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQH-PFLK 276 (292)
T ss_pred CCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhhC-hhhh
Confidence 112355668889999999999999999999998 5553
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-28 Score=260.03 Aligned_cols=241 Identities=16% Similarity=0.182 Sum_probs=185.3
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCC-----CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEe
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDD-----GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~-----g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~ 90 (771)
+..+|++.+.+|.|+ | +||.|+.+.+ ...|++|.+..... ......+++|+++|++++||||+++++++..
T Consensus 3 ~~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 79 (275)
T cd05046 3 PRSNLQEITTLGRGEFG--EVFLAKAKGIEEEGGETLVLVKALQKTKD-ENLQSEFRRELDMFRKLSHKNVVRLLGLCRE 79 (275)
T ss_pred ChHhceeeeeeccccee--EEEEEEeccCCcCCCcceEEEEccCCccc-hHHHHHHHHHHHHHHhcCCcceeeeEEEECC
Confidence 345799999999997 7 9999997643 46799998875322 2356678999999999999999999998875
Q ss_pred cccCcCCcccEEEEEecCC--cchHHHHHHhCCCC------CCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEE
Q 004157 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLEG------SQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV 162 (771)
Q Consensus 91 e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~------~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v 162 (771)
. ...|+||||+ ++|.+++....... ......+..++.||+.||.|||+ ++++||||||+||++
T Consensus 80 ~--------~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~-~~i~H~dlkp~Nili 150 (275)
T cd05046 80 A--------EPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSN-ARFVHRDLAARNCLV 150 (275)
T ss_pred C--------CcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhh-cCcccCcCccceEEE
Confidence 3 3789999999 58999987654211 23445567779999999999996 899999999999999
Q ss_pred cCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCC
Q 004157 163 TQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLS 241 (771)
Q Consensus 163 ~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~ 241 (771)
+.+|.+||+|||++........ ........+..|++||.+.+ .....++|+|||||++|++++ |..+|
T Consensus 151 ~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~~~~~~y~~PE~~~~------~~~~~~~Di~slG~~l~~l~~~~~~p~ 219 (275)
T cd05046 151 SSQREVKVSLLSLSKDVYNSEY-----YKLRNALIPLRWLAPEAVQE------DDFSTKSDVWSFGVLMWEVFTQGELPF 219 (275)
T ss_pred eCCCcEEEcccccccccCcccc-----cccCCceeEEeecChhhhcc------CCCCchhhHHHHHHHHHHHHhCCCCCc
Confidence 9999999999999865432110 00111123447999998765 245678999999999999998 55565
Q ss_pred Chhh--------------hhccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 242 KTEE--------------LRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 242 ~~~~--------------l~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.... ......+|..+.+++.+||+.+|.+||++.+++..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 220 YGLSDEEVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred cccchHHHHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 3211 01124567889999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-28 Score=261.80 Aligned_cols=240 Identities=14% Similarity=0.167 Sum_probs=182.5
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECC-----CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEec
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKD-----DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~-----~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e 91 (771)
..+|++.+.||.|+ | .||+|+.+. .+..|+||.+...... .....+.+|+..++.++||||+++++++...
T Consensus 5 ~~~~~i~~~lg~G~~g--~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (288)
T cd05061 5 REKITLLRELGQGSFG--MVYEGNARDIIKGEAETRVAVKTVNESASL-RERIEFLNEASVMKGFTCHHVVRLLGVVSKG 81 (288)
T ss_pred HHHceeeeeecCCCCc--EEEEEEEeccCCCCcceEEEEEECCCcCCH-HHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 45799999999998 8 999997653 3458999998754322 2344578899999999999999999998753
Q ss_pred ccCcCCcccEEEEEecCC--cchHHHHHHhCCC-------CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEE
Q 004157 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLE-------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV 162 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~-------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v 162 (771)
...|+||||+ ++|.++++..... .......+..++.||+.||.|||+ .+++||||||+||++
T Consensus 82 --------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~-~~i~H~dikp~nili 152 (288)
T cd05061 82 --------QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA-KKFVHRDLAARNCMV 152 (288)
T ss_pred --------CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcCCCCChheEEE
Confidence 3789999999 6899999764321 111233455669999999999996 899999999999999
Q ss_pred cCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCC
Q 004157 163 TQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLS 241 (771)
Q Consensus 163 ~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~ 241 (771)
+.++.+||+|||+++.......... ......+..|+|||.+.+ ..++.++|+|||||++||+++ |..|+
T Consensus 153 ~~~~~~~L~Dfg~~~~~~~~~~~~~----~~~~~~~~~y~~pE~~~~------~~~~~~~DvwslG~~l~el~~~~~~p~ 222 (288)
T cd05061 153 AHDFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVRWMAPESLKD------GVFTTSSDMWSFGVVLWEITSLAEQPY 222 (288)
T ss_pred cCCCcEEECcCCccccccccccccc----cCCCcccccccCHHHhcc------CCCChHhHHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999876543211000 011122347999999865 356678999999999999998 56666
Q ss_pred Chhh---h----------hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 242 KTEE---L----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 242 ~~~~---l----------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.... . .....+|..+.+++.+||+.+|.+||++.++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 273 (288)
T cd05061 223 QGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVN 273 (288)
T ss_pred CCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 4311 1 111345778999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-28 Score=255.31 Aligned_cols=230 Identities=17% Similarity=0.231 Sum_probs=183.4
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEEE
Q 004157 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104 (771)
Q Consensus 27 ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iyI 104 (771)
+|.|+ | .||.++++.+++.|+||++.+..... .....+.+|++.++.++||||+++++.++.+ ..+|+
T Consensus 1 lg~G~~~--~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--------~~~~~ 70 (250)
T cd05123 1 LGKGSFG--KVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTE--------EKLYL 70 (250)
T ss_pred CCCCCce--EEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecC--------CeeEE
Confidence 45665 6 99999999899999999998654322 3466788999999999999999999998763 48999
Q ss_pred EecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCCC
Q 004157 105 VTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGN 182 (771)
Q Consensus 105 VtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~ 182 (771)
|||++ ++|.+++..... .....+..++.||+.||.|||+ .+++|+||+|+||+++.+|.++|+|||++......
T Consensus 71 v~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~qi~~~l~~lh~-~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~ 146 (250)
T cd05123 71 VLEYAPGGELFSHLSKEGR---FSEERARFYAAEIVLALEYLHS-LGIIYRDLKPENILLDADGHIKLTDFGLAKELSSE 146 (250)
T ss_pred EEecCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCceecCCCcceEEEcCCCcEEEeecCcceecccC
Confidence 99999 479988877542 2344566779999999999996 99999999999999999999999999998776542
Q ss_pred CCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh------------ccC
Q 004157 183 NEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------------NTA 250 (771)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------------~~~ 250 (771)
... .........|++||...+. ..+.++|+|+|||++|++++|..||...+.. ...
T Consensus 147 ~~~------~~~~~~~~~~~~Pe~~~~~------~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 214 (250)
T cd05123 147 GSR------TNTFCGTPEYLAPEVLLGK------GYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFPE 214 (250)
T ss_pred CCc------ccCCcCCccccChHHhCCC------CCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCC
Confidence 110 1112234479999998652 4567899999999999999999887543211 113
Q ss_pred CCCcchHHHHHHHhccCCCCCCCh---HHHhhCCC
Q 004157 251 SIPKSLLPDYQRLLSSMPSRRLNS---SKLIENSE 282 (771)
Q Consensus 251 ~IP~~l~~~i~~lL~~~P~~Rps~---~~lL~~~~ 282 (771)
.+|..+.+++++||..+|..||++ .++++|++
T Consensus 215 ~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~ 249 (250)
T cd05123 215 FLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPF 249 (250)
T ss_pred CCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCC
Confidence 457789999999999999999999 89988843
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=3e-28 Score=254.11 Aligned_cols=231 Identities=16% Similarity=0.181 Sum_probs=178.3
Q ss_pred CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEE
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIY 103 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iy 103 (771)
++||.|+ | .||++.+.. ++.|+||++...... .....+++|+++++.+.||||+++++++... ...|
T Consensus 1 ~~lg~g~~g--~v~~~~~~~-~~~v~~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--------~~~~ 68 (251)
T cd05041 1 EKIGKGNFG--DVYKGVLKG-NTEVAVKTCRSTLPP-DLKRKFLQEAEILKQYDHPNIVKLIGVCVQK--------QPIY 68 (251)
T ss_pred CccccCCCc--eEEEEEEeC-CCcEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCeEEEEEEEecC--------CCeE
Confidence 3678887 7 999999887 999999998765333 3456788999999999999999999998864 3789
Q ss_pred EEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCC
Q 004157 104 IVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (771)
Q Consensus 104 IVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~ 181 (771)
+|+||+ ++|.+++..... ......+...+.|++.||.|||+ .+++||||+|+||+++.++.+||+|||++.....
T Consensus 69 ~v~e~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~lH~-~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~ 145 (251)
T cd05041 69 IVMELVPGGSLLTFLRKKKN--RLTVKKLLQMSLDAAAGMEYLES-KNCIHRDLAARNCLVGENNVLKISDFGMSREEEG 145 (251)
T ss_pred EEEEcCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHh-CCEehhhcCcceEEEcCCCcEEEeeccccccccC
Confidence 999999 579888866432 12344455668899999999996 8999999999999999999999999999876542
Q ss_pred CCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhh-------hh------
Q 004157 182 NNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE-------LR------ 247 (771)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~-------l~------ 247 (771)
...... ......+..|+|||.+.+ ..++.++|+|||||++|++++ |..|+.... ..
T Consensus 146 ~~~~~~----~~~~~~~~~y~~PE~~~~------~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~~ 215 (251)
T cd05041 146 GIYTVS----DGLKQIPIKWTAPEALNY------GRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMP 215 (251)
T ss_pred Ccceec----cccCcceeccCChHhhcc------CCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCCCC
Confidence 111000 000112346999999865 356788999999999999998 666664321 11
Q ss_pred ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 ~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
....+|..+.+++.+|+..+|.+||++.++++.
T Consensus 216 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~ 248 (251)
T cd05041 216 APQLCPEEIYRLMLQCWAYDPENRPSFSEIYNE 248 (251)
T ss_pred CCccCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence 112456789999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-28 Score=264.73 Aligned_cols=242 Identities=16% Similarity=0.255 Sum_probs=184.0
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEEC-------CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeee
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSK-------DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHS 87 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k-------~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~ 87 (771)
...+|++++.||.|+ | .||.|+.. .++..|+||.+.... .......+.+|+..++.+ +||||+++++.
T Consensus 13 ~~~~~~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~ 89 (304)
T cd05101 13 SRDKLTLGKPLGEGCFG--QVVMAEALGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGA 89 (304)
T ss_pred cHHHeeecceeeccCCc--eEEEEEEeccCCCCCCcceeEEeeeccccc-chHHHHHHHHHHHHHHhhccCCCchheeEE
Confidence 345799999999998 7 99999753 234579999987532 223456788999999999 89999999999
Q ss_pred EEecccCcCCcccEEEEEecCC--cchHHHHHHhCCCC-------------CCcHHHHHHHHHHHHHHHHHHHcCCCcee
Q 004157 88 TEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEG-------------SQRDEYYAWGLNQIAKAVSFLNNDCKLVH 152 (771)
Q Consensus 88 ~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~-------------~~~~~~i~~gl~QI~~aL~fLH~~~~ivH 152 (771)
+... ..+|+||||+ ++|.++|....... ......+..++.||+.||.|||+ .+++|
T Consensus 90 ~~~~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~-~givH 160 (304)
T cd05101 90 CTQD--------GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLAS-QKCIH 160 (304)
T ss_pred EecC--------CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHH-CCeee
Confidence 8763 3789999999 58999997643211 11223456679999999999996 89999
Q ss_pred cCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHH
Q 004157 153 GNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIY 232 (771)
Q Consensus 153 ~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~ 232 (771)
|||||+||+++.+|.+||+|||+++......... .......+..|+|||++.+ ..++.++|+|||||++|
T Consensus 161 ~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~ 230 (304)
T cd05101 161 RDLAARNVLVTENNVMKIADFGLARDVNNIDYYK----KTTNGRLPVKWMAPEALFD------RVYTHQSDVWSFGVLMW 230 (304)
T ss_pred cccccceEEEcCCCcEEECCCccceecccccccc----cccCCCCCceeeCchhhcc------CCCCchhhHHHHHHHHH
Confidence 9999999999999999999999998764321110 0111122347999998865 35667899999999999
Q ss_pred HHhh-CCCCCChhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 233 ELFS-GMRLSKTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 233 el~~-g~~p~~~~~l~-------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
++++ |..++...... ....++..+..++.+||..+|..||++.++++.
T Consensus 231 el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~ 292 (304)
T cd05101 231 EIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVED 292 (304)
T ss_pred HHHcCCCCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 9998 56665432111 113467789999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-28 Score=261.37 Aligned_cols=232 Identities=14% Similarity=0.192 Sum_probs=177.0
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHH---HhcCCCCCeeEEeeeEEecccCcCCcccE
Q 004157 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKR---LRTVRHPNILAFLHSTEVENIDATSTKIT 101 (771)
Q Consensus 27 ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~---Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~ 101 (771)
||+|+ | .||++.++.+|+.|+||++.++.... .......++... +...+||||+.+++.+..+ ..
T Consensus 2 lg~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--------~~ 71 (279)
T cd05633 2 IGRGGFG--EVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTP--------DK 71 (279)
T ss_pred cccCCCe--EEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecC--------Ce
Confidence 67776 7 99999999999999999998643321 112233444433 3445799999999999864 37
Q ss_pred EEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccccc
Q 004157 102 IYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (771)
Q Consensus 102 iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~ 179 (771)
.|+||||+ ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|||++...
T Consensus 72 ~~lv~e~~~~~~L~~~i~~~~~---l~~~~~~~i~~qi~~al~~lH~-~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~ 147 (279)
T cd05633 72 LCFILDLMNGGDLHYHLSQHGV---FSEKEMRFYATEIILGLEHMHN-RFVVYRDLKPANILLDEHGHVRISDLGLACDF 147 (279)
T ss_pred EEEEEecCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCcCCCCCCHHHEEECCCCCEEEccCCcceec
Confidence 89999999 579888876543 2344566779999999999996 89999999999999999999999999998755
Q ss_pred CCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh------hh------
Q 004157 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE------LR------ 247 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~------l~------ 247 (771)
.... .....+...|+|||....+ ..++.++|+|||||++|+|++|..||.... +.
T Consensus 148 ~~~~--------~~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 214 (279)
T cd05633 148 SKKK--------PHASVGTHGYMAPEVLQKG-----TAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTV 214 (279)
T ss_pred cccC--------ccCcCCCcCccCHHHhcCC-----CCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcC
Confidence 4311 1112345689999987532 345678999999999999999998874321 11
Q ss_pred ---ccCCCCcchHHHHHHHhccCCCCCC-----ChHHHhhCCCCCcc
Q 004157 248 ---NTASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENSEYFQN 286 (771)
Q Consensus 248 ---~~~~IP~~l~~~i~~lL~~~P~~Rp-----s~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||..+|.+|+ ++.++++| +||+.
T Consensus 215 ~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h-~~~~~ 260 (279)
T cd05633 215 NVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH-VFFKG 260 (279)
T ss_pred CcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC-ccccC
Confidence 0124667789999999999999999 59999988 67755
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-28 Score=259.40 Aligned_cols=238 Identities=17% Similarity=0.172 Sum_probs=182.9
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCC----cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEec
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGS----PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~----~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e 91 (771)
....|++.+.||.|+ | +||+|+++.+|+ .|+||++..... ......+.+|+.+++.+.||||+++++.+...
T Consensus 5 ~~~~~~~~~~lg~G~~g--~vy~~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~ 81 (279)
T cd05109 5 KETELKKVKVLGSGAFG--TVYKGIWIPDGENVKIPVAIKVLRENTS-PKANKEILDEAYVMAGVGSPYVCRLLGICLTS 81 (279)
T ss_pred chhheeeeeecCCCCCc--eEEEEEEecCCCccceEEEEEEecCCCC-HHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC
Confidence 345699999999998 8 999999887776 489999875432 23456788899999999999999999988642
Q ss_pred ccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEE
Q 004157 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWK 169 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~K 169 (771)
..++++|++ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.++.+|
T Consensus 82 ---------~~~l~~~~~~~g~l~~~l~~~~~--~~~~~~~~~~~~qi~~~L~~lH~-~~iiH~dlkp~Nil~~~~~~~k 149 (279)
T cd05109 82 ---------TVQLVTQLMPYGCLLDYVRENKD--RIGSQDLLNWCVQIAKGMSYLEE-VRLVHRDLAARNVLVKSPNHVK 149 (279)
T ss_pred ---------CcEEEEEcCCCCCHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHH-CCeeccccccceEEEcCCCcEE
Confidence 568999999 689888876431 12233445558899999999996 8999999999999999999999
Q ss_pred EEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh--
Q 004157 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL-- 246 (771)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l-- 246 (771)
|+|||+++........ ........+..|++||...+ ..++.++|+|||||++||+++ |..|+.....
T Consensus 150 L~dfG~~~~~~~~~~~----~~~~~~~~~~~y~~PE~~~~------~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~ 219 (279)
T cd05109 150 ITDFGLARLLDIDETE----YHADGGKVPIKWMALESILH------RRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE 219 (279)
T ss_pred ECCCCceeecccccce----eecCCCccchhhCCHHHhcc------CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 9999999876432110 00011122347999999865 356788999999999999988 7777653211
Q ss_pred -----hc------cCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 247 -----RN------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 247 -----~~------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.. ...++..+..++.+||..+|..||++.++++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 220 IPDLLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred HHHHHHCCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 11 1235667889999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.3e-28 Score=253.64 Aligned_cols=230 Identities=19% Similarity=0.207 Sum_probs=177.1
Q ss_pred CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEE
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIY 103 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iy 103 (771)
+.||.|+ | .||+|..+ ++..|++|++...... .....+.+|++.+++++||||+++++.+... ...|
T Consensus 1 ~~ig~g~~g--~vy~~~~~-~~~~~a~K~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--------~~~~ 68 (250)
T cd05085 1 ELLGKGNFG--EVFKGTLK-DKTPVAVKTCKEDLPQ-ELKIKFLSEARILKQYDHPNIVKLIGVCTQR--------QPIY 68 (250)
T ss_pred CccCCCCCc--eEEEEEec-CCcEEEEEecCCcCCH-HHHHHHHHHHHHHHhCCCCCcCeEEEEEecC--------CccE
Confidence 3578887 8 99999865 6889999998754332 3345688999999999999999999998764 3789
Q ss_pred EEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCC
Q 004157 104 IVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (771)
Q Consensus 104 IVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~ 181 (771)
+||||+ ++|.+++..... ......+..++.|++.+|.|||+ .+++||||+|+||+++.++.+||+|||++.....
T Consensus 69 lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~-~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 145 (250)
T cd05085 69 IVMELVPGGDFLSFLRKKKD--ELKTKQLVKFALDAAAGMAYLES-KNCIHRDLAARNCLVGENNVLKISDFGMSRQEDD 145 (250)
T ss_pred EEEECCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHh-CCeeecccChheEEEcCCCeEEECCCccceeccc
Confidence 999999 578888865432 12344556668999999999996 8999999999999999999999999999875433
Q ss_pred CCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh-------------h
Q 004157 182 NNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL-------------R 247 (771)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l-------------~ 247 (771)
..... ......+..|+|||+..+ ..++.++|+|||||++|++++ |..||..... .
T Consensus 146 ~~~~~-----~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~ 214 (250)
T cd05085 146 GIYSS-----SGLKQIPIKWTAPEALNY------GRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRMS 214 (250)
T ss_pred ccccc-----CCCCCCcccccCHHHhcc------CCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 11100 000112346999999865 356678999999999999998 7777643211 1
Q ss_pred ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 ~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
....+|..+.+++.+|++.+|.+||++.++++.
T Consensus 215 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 247 (250)
T cd05085 215 CPQKCPDDVYKVMQRCWDYKPENRPKFSELQKE 247 (250)
T ss_pred CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence 123567889999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-28 Score=262.09 Aligned_cols=240 Identities=15% Similarity=0.178 Sum_probs=183.8
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECC-----CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEec
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKD-----DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~-----~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e 91 (771)
...|.+.+.+|.|+ | .||.|.+.. ++..|++|.+.... ....+.+.+|++.+++++||||+++++++...
T Consensus 4 ~~~~~~~~~lg~g~~g--~vy~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 79 (291)
T cd05094 4 RRDIVLKRELGEGAFG--KVFLAECYNLSPTKDKMLVAVKALKDPT--LAARKDFQREAELLTNLQHEHIVKFYGVCGDG 79 (291)
T ss_pred hHHeEEeeeecccCCC--eEEEeEeeccCCCCcceeeEEEecCCcc--HHHHHHHHHHHHHHhcCCCCCcceEEEEEccC
Confidence 34688999999997 7 899998643 45568888876432 23346788999999999999999999998763
Q ss_pred ccCcCCcccEEEEEecCC--cchHHHHHHhCC-------------CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCC
Q 004157 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGL-------------EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVC 156 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~-------------~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIk 156 (771)
...|+||||+ ++|.+++..... ........+..++.||+.||.|||+ .+++|||||
T Consensus 80 --------~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~-~~i~H~dlk 150 (291)
T cd05094 80 --------DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS-QHFVHRDLA 150 (291)
T ss_pred --------CceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecccC
Confidence 3789999999 579999976432 1112344566779999999999996 899999999
Q ss_pred CCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh
Q 004157 157 LSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS 236 (771)
Q Consensus 157 p~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~ 236 (771)
|+||+++.++.+||+|||++.......... ..........|+|||++.+ ..++.++|+|||||++|+|++
T Consensus 151 p~Nil~~~~~~~~l~dfg~a~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~el~t 220 (291)
T cd05094 151 TRNCLVGANLLVKIGDFGMSRDVYSTDYYR----VGGHTMLPIRWMPPESIMY------RKFTTESDVWSFGVILWEIFT 220 (291)
T ss_pred cceEEEccCCcEEECCCCcccccCCCceee----cCCCCCcceeecChHHhcc------CCCCchhhHHHHHHHHHHHHh
Confidence 999999999999999999987654321100 0011122347999998876 356778999999999999998
Q ss_pred -CCCCCChhhh-------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 237 -GMRLSKTEEL-------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 237 -g~~p~~~~~l-------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
|..|+..... .....+|..+.+++.+||+.+|.+||++.++++.
T Consensus 221 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~ 278 (291)
T cd05094 221 YGKQPWFQLSNTEVIECITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKI 278 (291)
T ss_pred CCCCCCCCCCHHHHHHHHhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 8877633211 1123467789999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-28 Score=260.34 Aligned_cols=241 Identities=15% Similarity=0.174 Sum_probs=185.9
Q ss_pred CCceecCCCCCCC-CceEEEEeEECC----CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKD----DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~----~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
..|++.+.||.|+ | .||+|+... ++..|+||++...... .....+.+|++.+++++||||++++++++...
T Consensus 4 ~~~~~~~~ig~g~~~--~v~~~~~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~- 79 (284)
T cd05038 4 RHLKFIKQLGEGHFG--KVELCRYDPLGDNTGEQVAVKSLNHSGEE-QHRSDFEREIEILRTLDHENIVKYKGVCEKPG- 79 (284)
T ss_pred hhchhheeeccCCCe--eEEEeeecCCCCCCceEEEEEEeccccch-HHHHHHHHHHHHHHhCCCCChheEEeeeecCC-
Confidence 3578889999998 8 999998653 4789999999865433 35677899999999999999999999887644
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEE
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~ 171 (771)
....|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+
T Consensus 80 -----~~~~~lv~e~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~l~~aL~~lH~-~~i~H~dl~p~nil~~~~~~~~l~ 151 (284)
T cd05038 80 -----GRSLRLIMEYLPSGSLRDYLQRHRD--QINLKRLLLFSSQICKGMDYLGS-QRYIHRDLAARNILVESEDLVKIS 151 (284)
T ss_pred -----CCceEEEEecCCCCCHHHHHHhCcc--ccCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHhEEEcCCCCEEEc
Confidence 34789999999 479999876542 12334466679999999999996 899999999999999999999999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh----
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---- 247 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~---- 247 (771)
|||++.......... ........+..|++||...+ ..++.++|+|||||++|||++|..++......
T Consensus 152 dfg~~~~~~~~~~~~---~~~~~~~~~~~~~~Pe~~~~------~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~ 222 (284)
T cd05038 152 DFGLAKVLPEDKDYY---YVKEPGESPIFWYAPECLRT------SKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRM 222 (284)
T ss_pred ccccccccccCCcce---eccCCCCCcccccCcHHHcc------CCCCcccchHHHhhhhheeeccCCCcccccchhccc
Confidence 999998765321100 00111223346999998865 25667899999999999999998765421100
Q ss_pred ------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 ------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 ------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
....+|..+.+++.+||+.+|..||++.++++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 279 (284)
T cd05038 223 IGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILI 279 (284)
T ss_pred cccccccccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence 012356678899999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-28 Score=261.66 Aligned_cols=241 Identities=12% Similarity=0.142 Sum_probs=181.6
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECC----------------CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCC
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKD----------------DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHP 79 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~----------------~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHP 79 (771)
+..+|++.++||.|+ | +||.+.+.. ++..|+||++.... .......+.+|+++++.++||
T Consensus 3 ~~~~~~~~~~lg~G~~g--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~~E~~~l~~l~~~ 79 (296)
T cd05095 3 PRKRLTFKEKLGEGQFG--EVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA-NKNARNDFLKEIKIMSRLKDP 79 (296)
T ss_pred ChhhceeeeeccCCCCC--eEEecccccccccccccccccCCCCceeEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCC
Confidence 345699999999998 8 999885432 34578999987542 233456788999999999999
Q ss_pred CeeEEeeeEEecccCcCCcccEEEEEecCC--cchHHHHHHhCCCCC--------CcHHHHHHHHHHHHHHHHHHHcCCC
Q 004157 80 NILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGS--------QRDEYYAWGLNQIAKAVSFLNNDCK 149 (771)
Q Consensus 80 nIlkv~d~~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~--------~~~~~i~~gl~QI~~aL~fLH~~~~ 149 (771)
||+++++++... ...|+||||+ ++|.+++........ .....+..++.||+.||.|||+ .+
T Consensus 80 ~i~~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~-~~ 150 (296)
T cd05095 80 NIIRLLAVCITS--------DPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSS-LN 150 (296)
T ss_pred CcceEEEEEecC--------CccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHH-CC
Confidence 999999998764 3789999999 479998876542211 1223456679999999999996 89
Q ss_pred ceecCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHH
Q 004157 150 LVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGC 229 (771)
Q Consensus 150 ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~ 229 (771)
++||||||+||+++.++.+||+|||++..+...... ........+..|++||...+ ..++.++|+|||||
T Consensus 151 i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~----~~~~~~~~~~~~~~pe~~~~------~~~~~~~DiwSlG~ 220 (296)
T cd05095 151 FVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYY----RIQGRAVLPIRWMSWESILL------GKFTTASDVWAFGV 220 (296)
T ss_pred eecccCChheEEEcCCCCEEeccCcccccccCCcce----eccCcCcCccccCCHHHHhc------CCccchhhhhHHHH
Confidence 999999999999999999999999998765432110 00001122357999998765 24667999999999
Q ss_pred HHHHHhh--CCCCCChhh----h----------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 230 LIYELFS--GMRLSKTEE----L----------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 230 li~el~~--g~~p~~~~~----l----------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
++|||++ |..|+.... . .....+|..+.+++.+||+.+|.+||++.++++
T Consensus 221 ~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 221 TLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred HHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 9999998 555553211 0 011345678899999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-28 Score=257.72 Aligned_cols=239 Identities=15% Similarity=0.156 Sum_probs=182.9
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCC---cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGS---PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~---~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
.|++.+.+|.|+ | .||+|+.+.+++ .|+||++.... .+.....+.+|+..++.++||||+++++++..+
T Consensus 5 ~~~~~~~lg~g~~g--~vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~---- 77 (269)
T cd05065 5 CVKIEEVIGAGEFG--EVCRGRLKLPGKREIFVAIKTLKSGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKS---- 77 (269)
T ss_pred HeEEEeEecCCCCC--eEEEEEEecCCCCceeEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCC----
Confidence 489999999998 8 999999987765 59999987542 334456788999999999999999999998753
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+|+||||+ ++|.+++..... ......+..++.|++.||.|||+ .+++||||+|+||+++.++.+||+||
T Consensus 78 ----~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~~l~~al~~lH~-~g~~H~dl~p~nili~~~~~~kl~df 150 (269)
T cd05065 78 ----RPVMIITEFMENGALDSFLRQNDG--QFTVIQLVGMLRGIAAGMKYLSE-MNYVHRDLAARNILVNSNLVCKVSDF 150 (269)
T ss_pred ----CceEEEEecCCCCcHHHHHhhCCC--CCCHHHHHHHHHHHHHHHHHHHH-CCEeecccChheEEEcCCCcEEECCC
Confidence 3789999999 478888876432 12333455668999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL------ 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l------ 246 (771)
|++........... .........+..|++||...+ ..++.++|+|||||++||+++ |..||.....
T Consensus 151 g~~~~~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~------~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~ 223 (269)
T cd05065 151 GLSRFLEDDTSDPT-YTSSLGGKIPIRWTAPEAIAY------RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINA 223 (269)
T ss_pred ccccccccCccccc-cccccCCCcceeecCHhHhcc------CcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHH
Confidence 99876543211100 000011111236999999865 356678999999999999886 8777643211
Q ss_pred -------hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 247 -------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 247 -------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.....+|..+.+++.+|+..+|.+||++.+++.
T Consensus 224 i~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 263 (269)
T cd05065 224 IEQDYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVS 263 (269)
T ss_pred HHcCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 111345677899999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.2e-30 Score=276.79 Aligned_cols=237 Identities=15% Similarity=0.151 Sum_probs=188.3
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
|.-.+.||.|+ | .||-|++..+++.||||++..+... ......+.+|++.|++|+|||+|.|-++|..+.
T Consensus 28 f~dLrEIGHGSFG--AVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~------ 99 (948)
T KOG0577|consen 28 FSDLREIGHGSFG--AVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREH------ 99 (948)
T ss_pred HHHHHHhcCCccc--eeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccc------
Confidence 66667899999 9 9999999999999999999865322 234567888999999999999999999998754
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
+.|+||||| |+-.++|.-.... ..+..|+.+.++.+.||.|||+ .+.||||||..||++++.|.+||+|||.+.
T Consensus 100 --TaWLVMEYClGSAsDlleVhkKp--lqEvEIAAi~~gaL~gLaYLHS-~~~IHRDiKAGNILLse~g~VKLaDFGSAs 174 (948)
T KOG0577|consen 100 --TAWLVMEYCLGSASDLLEVHKKP--LQEVEIAAITHGALQGLAYLHS-HNRIHRDIKAGNILLSEPGLVKLADFGSAS 174 (948)
T ss_pred --hHHHHHHHHhccHHHHHHHHhcc--chHHHHHHHHHHHHHHHHHHHH-hhHHhhhccccceEecCCCeeeeccccchh
Confidence 779999999 7766666544321 1233367779999999999997 899999999999999999999999999987
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCC-CChhhhhcc-------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL-SKTEELRNT------- 249 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p-~~~~~l~~~------- 249 (771)
..... ..+++++.|||||++..- -...|+-++||||||+.+.||...+|| |+-..+..+
T Consensus 175 i~~PA----------nsFvGTPywMAPEVILAM---DEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNe 241 (948)
T KOG0577|consen 175 IMAPA----------NSFVGTPYWMAPEVILAM---DEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE 241 (948)
T ss_pred hcCch----------hcccCCccccchhHheec---cccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcC
Confidence 66542 235667789999998631 114677799999999999999998865 443332222
Q ss_pred ------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCC
Q 004157 250 ------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEY 283 (771)
Q Consensus 250 ------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~f 283 (771)
..-...+..++..||..-|..||+.+++|.|...
T Consensus 242 sPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv 281 (948)
T KOG0577|consen 242 SPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFV 281 (948)
T ss_pred CCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchh
Confidence 1223457888999999999999999999999433
|
|
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.3e-28 Score=257.62 Aligned_cols=237 Identities=16% Similarity=0.192 Sum_probs=183.6
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCC----cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGS----PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~----~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~ 92 (771)
...|++.+.||.|+ | +||+|+++.+|+ .|++|.+..... ......+.+|+..+++++||||+++++++..
T Consensus 6 ~~~~~~~~~ig~g~~g--~v~~~~~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-- 80 (279)
T cd05057 6 ETELEKIKVLGSGAFG--TVYKGVWIPEGEKVKIPVAIKVLREETS-PKANKEILDEAYVMASVDHPHVVRLLGICLS-- 80 (279)
T ss_pred HHHcEEcceecCCCCc--cEEEEEEecCCCCcceEEEEEeccCCCC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEec--
Confidence 45699999999998 8 999999887775 588888765433 3345678899999999999999999999875
Q ss_pred cCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEE
Q 004157 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL 170 (771)
...|+||||+ ++|.+++...... .....+..++.||+.||.|||+ ++++||||+|+||+++.++.+||
T Consensus 81 -------~~~~~v~e~~~~g~L~~~l~~~~~~--~~~~~~~~~~~qi~~~l~~LH~-~~i~H~di~p~nil~~~~~~~kL 150 (279)
T cd05057 81 -------SQVQLITQLMPLGCLLDYVRNHKDN--IGSQYLLNWCVQIAKGMSYLEE-KRLVHRDLAARNVLVKTPQHVKI 150 (279)
T ss_pred -------CceEEEEecCCCCcHHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHh-CCEEecccCcceEEEcCCCeEEE
Confidence 2689999999 5799988764322 2334455668999999999996 99999999999999999999999
Q ss_pred EccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhhh--
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR-- 247 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l~-- 247 (771)
+|||+++....... .........+..|++||.... ..++.++|+|||||++||+++ |..|+......
T Consensus 151 ~dfg~~~~~~~~~~----~~~~~~~~~~~~y~~PE~~~~------~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~ 220 (279)
T cd05057 151 TDFGLAKLLDVDEK----EYHAEGGKVPIKWMALESILH------RIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEI 220 (279)
T ss_pred CCCcccccccCccc----ceecCCCcccccccCHHHhhc------CCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHH
Confidence 99999986653211 111111122347999998764 356678999999999999998 88887542211
Q ss_pred -----c------cCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 248 -----N------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 248 -----~------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
. ....+..+..++.+|+..+|..||++.++++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 221 PDLLEKGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred HHHHhCCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 1 1123456788899999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.1e-28 Score=259.87 Aligned_cols=241 Identities=17% Similarity=0.169 Sum_probs=183.7
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECC-----CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEe
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKD-----DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~-----~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~ 90 (771)
...+|++.+.+|.|+ | .||+|.++. ++..|+||++.... .......+.+|+..+++++||||++++++++.
T Consensus 3 ~~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~ 79 (288)
T cd05050 3 PRNNIEYVRDIGQGAFG--RVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDHPNIVKLLGVCAV 79 (288)
T ss_pred ChHhceecccccccccc--cEEEEEEcccCCCCcceeEEEEecCCCc-CHHHHHHHHHHHHHHHhcCCCchheEEEEEcC
Confidence 345799999999998 8 999998753 67899999987543 23345678899999999999999999999876
Q ss_pred cccCcCCcccEEEEEecCC--cchHHHHHHhCCC-------------------CCCcHHHHHHHHHHHHHHHHHHHcCCC
Q 004157 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLE-------------------GSQRDEYYAWGLNQIAKAVSFLNNDCK 149 (771)
Q Consensus 91 e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~-------------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ 149 (771)
+ ...|+|+||+ ++|.+++...... .......+..++.||+.||.|||+ .+
T Consensus 80 ~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~-~~ 150 (288)
T cd05050 80 G--------KPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSE-RK 150 (288)
T ss_pred C--------CccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh-CC
Confidence 3 3789999999 4799998754310 011233456679999999999996 89
Q ss_pred ceecCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHH
Q 004157 150 LVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGC 229 (771)
Q Consensus 150 ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~ 229 (771)
++||||+|+||+++.+|.+||+|||++........... ......+..|+|||+..+ ..++.++|+|||||
T Consensus 151 i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~ 220 (288)
T cd05050 151 FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKA----SENDAIPIRWMPPESIFY------NRYTTESDVWAYGV 220 (288)
T ss_pred eecccccHhheEecCCCceEECccccceecccCccccc----cCCCccChhhcCHHHHhc------CCCCchhHHHHHHH
Confidence 99999999999999999999999999876543211000 011122347999998765 35678899999999
Q ss_pred HHHHHhh-CCCCCChh---hh-h---------ccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 230 LIYELFS-GMRLSKTE---EL-R---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 230 li~el~~-g~~p~~~~---~l-~---------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
++|+|++ |..++... .. . ....+|..+.+++.+||+.+|.+||++.++++
T Consensus 221 il~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 221 VLWEIFSYGMQPYYGMAHEEVIYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINR 284 (288)
T ss_pred HHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 9999997 65555321 11 1 12346778999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-28 Score=267.18 Aligned_cols=242 Identities=17% Similarity=0.236 Sum_probs=183.0
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCC-------CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeee
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDD-------GSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHS 87 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~-------g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~ 87 (771)
...+|++++.||.|+ | .||.|.+... +..|+||.+... ..+.....+.+|++.++++ +||||+++++.
T Consensus 10 ~~~~~~i~~~ig~G~~g--~v~~~~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 86 (334)
T cd05100 10 SRTRLTLGKPLGEGCFG--QVVMAEAIGIDKDKPNKPVTVAVKMLKDD-ATDKDLSDLVSEMEMMKMIGKHKNIINLLGA 86 (334)
T ss_pred CHhHeeecceeccccCC--cEEEEEEeccCCccCCcceeEEEEEcccc-cCHHHHHHHHHHHHHHHhhcCCCCeeeeeEE
Confidence 345799999999998 7 8999986432 236899988743 2334466788999999999 79999999999
Q ss_pred EEecccCcCCcccEEEEEecCC--cchHHHHHHhCCC-------------CCCcHHHHHHHHHHHHHHHHHHHcCCCcee
Q 004157 88 TEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLE-------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVH 152 (771)
Q Consensus 88 ~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~-------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH 152 (771)
+..+ ..+|+++||+ ++|.++|...... .......+..++.||+.||.|||+ .+++|
T Consensus 87 ~~~~--------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~-~givH 157 (334)
T cd05100 87 CTQD--------GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLAS-QKCIH 157 (334)
T ss_pred EccC--------CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH-CCeec
Confidence 8763 3789999999 5799998764311 112223455679999999999996 89999
Q ss_pred cCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHH
Q 004157 153 GNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIY 232 (771)
Q Consensus 153 ~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~ 232 (771)
|||||+||+++.++.+||+|||+++......... .......+..|+|||++.+ ..++.++|+|||||++|
T Consensus 158 ~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~ 227 (334)
T cd05100 158 RDLAARNVLVTEDNVMKIADFGLARDVHNIDYYK----KTTNGRLPVKWMAPEALFD------RVYTHQSDVWSFGVLLW 227 (334)
T ss_pred cccccceEEEcCCCcEEECCcccceecccccccc----cccCCCcCceEcCHHHhcc------CCcCchhhhHHHHHHHH
Confidence 9999999999999999999999997664321100 0111112246999999865 35667899999999999
Q ss_pred HHhh-CCCCCChhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 233 ELFS-GMRLSKTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 233 el~~-g~~p~~~~~l~-------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
||++ |..++...... ....++..+..++.+|++.+|.+||++.+++++
T Consensus 228 el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~ 289 (334)
T cd05100 228 EIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVED 289 (334)
T ss_pred HHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 9998 66666432110 112346678899999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.5e-30 Score=278.15 Aligned_cols=243 Identities=16% Similarity=0.231 Sum_probs=194.6
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~ 99 (771)
|+|...+|.|. | +||+|+++.++-..|-|+++.+. +..++.+.-|+.+|..+.||+|+++++.|..++
T Consensus 34 WeIiGELGDGAFG--KVyKA~nket~~lAAaKvIetks--eEELEDylVEIeILa~CdHP~ivkLl~ayy~en------- 102 (1187)
T KOG0579|consen 34 WEIIGELGDGAFG--KVYKAVNKETKLLAAAKVIETKS--EEELEDYLVEIEILAECDHPVIVKLLSAYYFEN------- 102 (1187)
T ss_pred HHHHhhhcCccch--hhhhhhcccchhhhhhhhhcccc--hhHHhhhhhhhhhhhcCCChHHHHHHHHHhccC-------
Confidence 67777888888 9 99999999999999999998643 345777888999999999999999999998764
Q ss_pred cEEEEEecCCc--chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 100 ITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 100 ~~iyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
.++|..|||+ ....++-+.+.. .....|+..++|++.||.|||+ .+|||||||..||+++-+|+++|+|||.+.
T Consensus 103 -kLwiliEFC~GGAVDaimlEL~r~--LtE~QIqvvc~q~ldALn~LHs-~~iIHRDLKAGNiL~TldGdirLADFGVSA 178 (1187)
T KOG0579|consen 103 -KLWILIEFCGGGAVDAIMLELGRV--LTEDQIQVVCYQVLDALNWLHS-QNIIHRDLKAGNILLTLDGDIRLADFGVSA 178 (1187)
T ss_pred -ceEEEEeecCCchHhHHHHHhccc--cchHHHHHHHHHHHHHHHHHhh-cchhhhhccccceEEEecCcEeeecccccc
Confidence 8999999993 466666554422 2344578889999999999996 899999999999999999999999999986
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCCh-hhh----------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT-EEL---------- 246 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~-~~l---------- 246 (771)
..... .-.+..+++++.|||||+..+... -...|.+++||||||+.+.||.-+.||... ..+
T Consensus 179 Kn~~t------~qkRDsFIGTPYWMAPEVvmCET~-KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSe 251 (1187)
T KOG0579|consen 179 KNKST------RQKRDSFIGTPYWMAPEVVMCETF-KDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSE 251 (1187)
T ss_pred cchhH------HhhhccccCCcccccchheeeccc-cCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcC
Confidence 54431 112334667778999999876432 235788999999999999999999887532 112
Q ss_pred ----hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 247 ----RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 247 ----~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
.+......++.+++++||..||..||+++++|+| +||.|
T Consensus 252 PPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H-pfv~~ 294 (1187)
T KOG0579|consen 252 PPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH-PFVQN 294 (1187)
T ss_pred CCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC-ccccc
Confidence 2223445568899999999999999999999999 66653
|
|
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.9e-28 Score=256.97 Aligned_cols=229 Identities=17% Similarity=0.165 Sum_probs=178.0
Q ss_pred CceecCCC--CCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccCc
Q 004157 20 PYNIGDPY--PSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 20 ~Y~i~e~i--g~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d~ 95 (771)
.|++.+.+ |.|. | +||.++++.++..+++|++........ |+.....+ +||||+++++.+...
T Consensus 15 ~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~k~~~~~~~~~~-------e~~~~~~~~~h~~iv~~~~~~~~~---- 81 (267)
T PHA03390 15 NCEIVKKLKLIDGKFG--KVSVLKHKPTQKLFVQKIIKAKNFNAI-------EPMVHQLMKDNPNFIKLYYSVTTL---- 81 (267)
T ss_pred hhccccceeecCCCce--EEEEEEEcCCCcEEEEEEEehhhcchh-------hHHHHHHhhcCCCEEEEEEEEecC----
Confidence 57777766 8887 8 999999999999999999976432211 22222222 699999999999864
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC-cEEEEc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL-DWKLHA 172 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G-~~KL~d 172 (771)
..+|+||||+ ++|.++++.... .....+..++.||++||.|||+ .+++||||+|+||+++.++ .++|+|
T Consensus 82 ----~~~~iv~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~p~nil~~~~~~~~~l~d 153 (267)
T PHA03390 82 ----KGHVLIMDYIKDGDLFDLLKKEGK---LSEAEVKKIIRQLVEALNDLHK-HNIIHNDIKLENVLYDRAKDRIYLCD 153 (267)
T ss_pred ----CeeEEEEEcCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeeeCCCCHHHEEEeCCCCeEEEec
Confidence 3899999999 579999877642 2344456669999999999996 8999999999999999998 999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-------
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE------- 245 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~------- 245 (771)
||++....... .......|+|||++.+ ..++.++|+|||||++|+|++|..||....
T Consensus 154 fg~~~~~~~~~----------~~~~~~~y~aPE~~~~------~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~ 217 (267)
T PHA03390 154 YGLCKIIGTPS----------CYDGTLDYFSPEKIKG------HNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLE 217 (267)
T ss_pred CccceecCCCc----------cCCCCCcccChhhhcC------CCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHH
Confidence 99987654321 1123458999999875 356678999999999999999998875321
Q ss_pred -h--------hccCCCCcchHHHHHHHhccCCCCCCC-hHHHhhCCCCCcc
Q 004157 246 -L--------RNTASIPKSLLPDYQRLLSSMPSRRLN-SSKLIENSEYFQN 286 (771)
Q Consensus 246 -l--------~~~~~IP~~l~~~i~~lL~~~P~~Rps-~~~lL~~~~fF~n 286 (771)
+ .....++..+.+++.+||+.+|.+|++ ++++++| +||.|
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h-~~~~~ 267 (267)
T PHA03390 218 SLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKH-PFLKI 267 (267)
T ss_pred HHHHhhcccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcC-CcccC
Confidence 1 111246778899999999999999996 6999998 56543
|
|
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-29 Score=257.30 Aligned_cols=245 Identities=19% Similarity=0.243 Sum_probs=186.5
Q ss_pred ceec-CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccCcCC
Q 004157 21 YNIG-DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 21 Y~i~-e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d~~~ 97 (771)
|++. +.+|+|. + .|.-++...+|..||||++++... ....++.+|++++.+.+ |+||++++++||+++
T Consensus 79 YkLt~e~LGeGAya--sVqtcv~i~t~~EYAVKiidKq~g--HsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~----- 149 (463)
T KOG0607|consen 79 YKLTSELLGEGAYA--SVQTCVSIQTGKEYAVKIIDKQPG--HSRSRVFREVETFYQCQGHKNILQLIEFFEDDT----- 149 (463)
T ss_pred HHhHHHHhcCccce--eeeeeeeeccchhhhhhhhhcCCc--hHHHHHHHHHHHHHHhcCCccHHHHHHHhcccc-----
Confidence 6664 5788887 7 899999999999999999997522 24566778999999997 999999999999854
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCc---EEEEc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD---WKLHA 172 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~---~KL~d 172 (771)
.+|+|||.+ +||..+|.++....+.. -...+..|+.||.|||. .||.||||||+||+...-.. +||||
T Consensus 150 ---~FYLVfEKm~GGplLshI~~~~~F~E~E---As~vvkdia~aLdFlH~-kgIAHRDlKPENiLC~~pn~vsPvKiCD 222 (463)
T KOG0607|consen 150 ---RFYLVFEKMRGGPLLSHIQKRKHFNERE---ASRVVKDIASALDFLHT-KGIAHRDLKPENILCESPNKVSPVKICD 222 (463)
T ss_pred ---eEEEEEecccCchHHHHHHHhhhccHHH---HHHHHHHHHHHHHHHhh-cCcccccCCccceeecCCCCcCceeeec
Confidence 899999999 68888887765433222 23348999999999995 89999999999999975443 89999
Q ss_pred cCcccccCCCCCCCCCCccccc---cccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----
Q 004157 173 FDVLSEFDGNNEAANGPMLQYA---WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE---- 245 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~---~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~---- 245 (771)
|++.+.......-. +..... .++...|||||+..- +..-...|..++|.||||+++|-|+.|.+||...-
T Consensus 223 fDLgSg~k~~~~~s--pastP~L~tPvGSAEfMAPEVVd~-fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dC 299 (463)
T KOG0607|consen 223 FDLGSGIKLNNDCS--PASTPELLTPVGSAEFMAPEVVDV-FVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADC 299 (463)
T ss_pred cccccccccCCCCC--CCCCccccCcccchhhcchhHHhh-hccccccccccccHHHHHHHHHHHHhCCCCccCccCCcC
Confidence 99988765433221 222211 122338999999753 11122467889999999999999999999984311
Q ss_pred --------------h-------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 246 --------------L-------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 246 --------------l-------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
+ +....|+....+++..||..++..|.++.++++| +|++
T Consensus 300 GWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnh-Pw~~ 365 (463)
T KOG0607|consen 300 GWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNH-PWVQ 365 (463)
T ss_pred CccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCC-cccc
Confidence 0 0112455567788899999999999999999998 4444
|
|
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.7e-28 Score=253.99 Aligned_cols=231 Identities=16% Similarity=0.158 Sum_probs=175.3
Q ss_pred CCCCCC-CceEEEEeEEC--CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEE
Q 004157 26 PYPSAW-GSWSHFQGTSK--DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITI 102 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k--~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~i 102 (771)
.||.|+ | .||.|+.+ .++..|+||++.... .....+.+.+|+.++++++||||++++++++. ...
T Consensus 2 ~ig~G~~g--~v~~~~~~~~~~~~~vavk~~~~~~-~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~---------~~~ 69 (257)
T cd05115 2 ELGSGNFG--CVKKGVYKMRKKQIDVAIKVLKNEN-EKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA---------EAL 69 (257)
T ss_pred ccCCCCcc--cEEEEEEecCCCceeEEEEEccccc-ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC---------CCe
Confidence 367777 7 89999875 345679999987543 23345678899999999999999999998763 268
Q ss_pred EEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccC
Q 004157 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (771)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~ 180 (771)
|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|||++....
T Consensus 70 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~ 146 (257)
T cd05115 70 MLVMEMASGGPLNKFLSGKKD--EITVSNVVELMHQVSMGMKYLEG-KNFVHRDLAARNVLLVNQHYAKISDFGLSKALG 146 (257)
T ss_pred EEEEEeCCCCCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHh-cCeeecccchheEEEcCCCcEEeccCCcccccc
Confidence 9999999 579988875332 12344566779999999999996 899999999999999999999999999987654
Q ss_pred CCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh-------h-----
Q 004157 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL-------R----- 247 (771)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l-------~----- 247 (771)
...... ........+..|+|||.+.. ..++.++|+|||||++|++++ |..||..... .
T Consensus 147 ~~~~~~---~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~ 217 (257)
T cd05115 147 ADDSYY---KARSAGKWPLKWYAPECINF------RKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRL 217 (257)
T ss_pred CCccce---eccCCCCCCcccCCHHHHcc------CCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCC
Confidence 321100 00111122347999998765 346678999999999999996 8888753211 0
Q ss_pred -ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 -NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 -~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....+..+.+++.+|+..+|++||+..++.+.
T Consensus 218 ~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~ 251 (257)
T cd05115 218 DCPAECPPEMYALMKDCWIYKWEDRPNFAKVEER 251 (257)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 112356789999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.5e-28 Score=259.81 Aligned_cols=243 Identities=15% Similarity=0.264 Sum_probs=186.6
Q ss_pred CceecCCCCCCC-CceEEEEeEEC---CCCCcEEEEEEeCCCCc--hhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSK---DDGSPVSIFSISGTNAQ--DGHLAAARNGVKRLRTVR-HPNILAFLHSTEVEN 92 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k---~~g~~VaIK~~~~~~~~--~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~ 92 (771)
+|++.+.+|.|+ | .||.+++. .+|..|+||++...... ....+.+.+|+++|++++ ||||+++++.++.+
T Consensus 1 ~y~~~~~lg~G~~g--~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~- 77 (290)
T cd05613 1 NFELLKVLGTGAYG--KVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTD- 77 (290)
T ss_pred CceeeeeeccCCcc--eEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecC-
Confidence 489999999998 8 88888874 47899999999753221 134566788999999995 99999999999863
Q ss_pred cCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEE
Q 004157 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL 170 (771)
..+|+||||+ ++|.+++...... ....+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||
T Consensus 78 -------~~~~lv~e~~~~~~L~~~l~~~~~l---~~~~~~~~~~qi~~al~~lH~-~~i~H~dl~p~nil~~~~~~~kl 146 (290)
T cd05613 78 -------TKLHLILDYINGGELFTHLSQRERF---KEQEVQIYSGEIVLALEHLHK-LGIIYRDIKLENILLDSNGHVVL 146 (290)
T ss_pred -------CeEEEEEecCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHeEECCCCCEEE
Confidence 3889999999 5799888765432 244566678899999999996 89999999999999999999999
Q ss_pred EccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-----
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----- 245 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----- 245 (771)
+|||++......... ......+...|++||.+.+.. ..+..++|+|||||++|+|++|..|+....
T Consensus 147 ~dfg~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~----~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~ 217 (290)
T cd05613 147 TDFGLSKEFHEDEVE-----RAYSFCGTIEYMAPDIVRGGD----GGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQ 217 (290)
T ss_pred eeCccceeccccccc-----ccccccCCcccCChhhccCCC----CCCCccccHHHHHHHHHHHhcCCCCCCcCCccccH
Confidence 999998765432110 111233445899999986421 234578999999999999999998874211
Q ss_pred --h-h----cc----CCCCcchHHHHHHHhccCCCCCC-----ChHHHhhCCCCCcc
Q 004157 246 --L-R----NT----ASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENSEYFQN 286 (771)
Q Consensus 246 --l-~----~~----~~IP~~l~~~i~~lL~~~P~~Rp-----s~~~lL~~~~fF~n 286 (771)
+ . .. ..++..+.+++.+||..+|.+|+ ++.+++.| +||+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~-~~~~~ 273 (290)
T cd05613 218 AEISRRILKSEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH-PFFQK 273 (290)
T ss_pred HHHHHHhhccCCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC-ccccc
Confidence 0 0 01 23455688999999999999997 78898888 56644
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.3e-28 Score=261.49 Aligned_cols=241 Identities=16% Similarity=0.192 Sum_probs=184.9
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEE-----CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEE
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTS-----KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTE 89 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~-----k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e 89 (771)
...+|.+++.||.|+ | .||.|+. ..++..|+||++..... ....+.+.+|+++++++ +||||+++++.+.
T Consensus 33 ~~~~~~~~~~ig~G~~g--~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 109 (302)
T cd05055 33 PRNNLSFGKTLGAGAFG--KVVEATAYGLSKSDAVMKVAVKMLKPTAH-SSEREALMSELKIMSHLGNHENIVNLLGACT 109 (302)
T ss_pred cHHHeEEcceeeccCCe--eEEEEEEecCCCCCceeEEEEEecCccCC-hHHHHHHHHHHHHHHhccCCCCcceEEEEEe
Confidence 344788999999998 8 8999875 34466899999875432 23456789999999999 7999999999987
Q ss_pred ecccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCc
Q 004157 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD 167 (771)
Q Consensus 90 ~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~ 167 (771)
.. ..+|+||||+ ++|.+++...... ......+..++.||+.||.|||+ .+++||||||+||+++.++.
T Consensus 110 ~~--------~~~~lv~e~~~~~~L~~~i~~~~~~-~l~~~~~~~i~~~i~~~l~~lH~-~~ivH~dlkp~Nil~~~~~~ 179 (302)
T cd05055 110 IG--------GPILVITEYCCYGDLLNFLRRKRES-FLTLEDLLSFSYQVAKGMAFLAS-KNCIHRDLAARNVLLTHGKI 179 (302)
T ss_pred cC--------CceEEEEEcCCCCcHHHHHHhCCCC-CCCHHHHHHHHHHHHHHHHHHHH-CCeehhhhccceEEEcCCCe
Confidence 63 3789999999 5799998764321 12344466678999999999996 89999999999999999999
Q ss_pred EEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh
Q 004157 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL 246 (771)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l 246 (771)
+||+|||++........ .........+..|+|||.+.+ ..++.++|+|||||++|++++ |..|+.....
T Consensus 180 ~~l~dfg~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~------~~~~~~~DiwslGvil~el~t~g~~p~~~~~~ 249 (302)
T cd05055 180 VKICDFGLARDIMNDSN----YVVKGNARLPVKWMAPESIFN------CVYTFESDVWSYGILLWEIFSLGSNPYPGMPV 249 (302)
T ss_pred EEECCCcccccccCCCc----eeecCCCCcccccCCHhhhcc------CCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCc
Confidence 99999999876543211 000111123347999998865 356678999999999999997 8777643211
Q ss_pred --------h------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 --------R------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 --------~------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
. ....++..+.+++.+||+.+|.+||++.++++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~ 297 (302)
T cd05055 250 DSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQL 297 (302)
T ss_pred hHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 0 112456789999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.5e-28 Score=254.82 Aligned_cols=245 Identities=11% Similarity=0.121 Sum_probs=183.6
Q ss_pred ceecCCCCCCC-CceEEEEeEECC---CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKD---DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~---~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
|++.+.||.|+ | +||+|..+. ++..|+||++..+.......+.+.+|++.+++++||||+++++++......+
T Consensus 1 ~~~~~~ig~g~~g--~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~- 77 (273)
T cd05074 1 FTLGRMLGKGEFG--SVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKG- 77 (273)
T ss_pred CcchhcccCCCCC--CEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCC-
Confidence 77889999998 8 899998654 4688999999866555555677889999999999999999999886532110
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCC---CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEE
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLE---GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~---~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~ 171 (771)
.....++++||+ ++|..++...... .......+..++.||+.||.|||+ .+++||||||+||+++.++.+||+
T Consensus 78 -~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~-~~i~H~dikp~nili~~~~~~kl~ 155 (273)
T cd05074 78 -RLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSS-KNFIHRDLAARNCMLNENMTVCVA 155 (273)
T ss_pred -cccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCEeecccchhhEEEcCCCCEEEC
Confidence 012357889998 5788777543211 112334456679999999999996 899999999999999999999999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh----
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL---- 246 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l---- 246 (771)
|||+++......... .......+..|++||...+ ..++.++|+|||||++|+|++ |.+++.....
T Consensus 156 dfg~~~~~~~~~~~~----~~~~~~~~~~~~~pe~~~~------~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~ 225 (273)
T cd05074 156 DFGLSKKIYSGDYYR----QGCASKLPVKWLALESLAD------NVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIY 225 (273)
T ss_pred cccccccccCCccee----cCCCccCchhhcCHhHHhc------CccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHH
Confidence 999988664321100 0111123347999998765 355678999999999999998 6677643221
Q ss_pred ---------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 ---------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 ---------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....++..+.+++.+|++.+|..||++.++++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~ 268 (273)
T cd05074 226 NYLIKGNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQ 268 (273)
T ss_pred HHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 1113456788999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-30 Score=261.87 Aligned_cols=246 Identities=15% Similarity=0.197 Sum_probs=199.8
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.-|.+.+++|+|+ | .||++.++++|+.|+||.+... ..++.+.+|+.++++++.|+|++||+.+...
T Consensus 33 EVFDi~~KLGEGSYG--SV~KAIH~EsG~v~AIK~VPV~----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~------ 100 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYG--SVHKAIHRESGHVLAIKKVPVD----TDLQEIIKEISIMQQCKSKYVVKYYGSYFKH------ 100 (502)
T ss_pred HHHHHHHHhcCCcch--HHHHHHHhccCcEEEEEecCcc----chHHHHHHHHHHHHHcCCchhhhhhhhhccC------
Confidence 3488899999998 8 8999999999999999998653 4567788899999999999999999998753
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
+.+||||||| ++..+.++.++.. ..+..|..++..-++||+|||. .+-+|||||..||+++.+|..||+|||.
T Consensus 101 --sDLWIVMEYCGAGSiSDI~R~R~K~--L~E~EIs~iL~~TLKGL~YLH~-~~KIHRDIKAGNILLNT~G~AKLADFGV 175 (502)
T KOG0574|consen 101 --SDLWIVMEYCGAGSISDIMRARRKP--LSEQEISAVLRDTLKGLQYLHD-LKKIHRDIKAGNILLNTDGIAKLADFGV 175 (502)
T ss_pred --CceEeehhhcCCCcHHHHHHHhcCC--ccHHHHHHHHHHHHhHHHHHHH-HHHHHhhcccccEEEcccchhhhhhccc
Confidence 3799999999 5899988776532 2344577779999999999995 8899999999999999999999999999
Q ss_pred ccccCCCCCCCCCCcccc-ccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCCh-hhhhccCC--
Q 004157 176 LSEFDGNNEAANGPMLQY-AWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT-EELRNTAS-- 251 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~-~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~-~~l~~~~~-- 251 (771)
+..+.+. +... ..++++.|||||++.. -+|...+||||||+...||..|++|+.. ..++.+.-
T Consensus 176 AGQLTDT-------MAKRNTVIGTPFWMAPEVI~E------IGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIP 242 (502)
T KOG0574|consen 176 AGQLTDT-------MAKRNTVIGTPFWMAPEVIEE------IGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIP 242 (502)
T ss_pred cchhhhh-------HHhhCccccCcccccHHHHHH------hccchhhhHhhhcchhhhhhcCCCCcccccccceeEecc
Confidence 9888763 2222 2344568999999875 3677899999999999999999998753 23333221
Q ss_pred ------------CCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc-hhhhhhhhh
Q 004157 252 ------------IPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN-KLVDTIHFM 295 (771)
Q Consensus 252 ------------IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n-~lv~~~~~L 295 (771)
-+.++.+++++||-.+|++|-++.++++| .|.+| +-+.+++.|
T Consensus 243 T~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H-~FiknA~g~~I~~~~ 298 (502)
T KOG0574|consen 243 TKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH-TFIKNAPGCDIMQLM 298 (502)
T ss_pred CCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh-hhhcCCCcccHHHHH
Confidence 22357788999999999999999999999 56644 566665554
|
|
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-28 Score=260.76 Aligned_cols=236 Identities=19% Similarity=0.228 Sum_probs=186.0
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~ 99 (771)
|+...+||.|+ | .||+|+.+.+|+.|+||++.... ......+.+|+..++.++||||+++++.+...
T Consensus 22 ~~~~~~lg~g~~g--~v~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-------- 89 (292)
T cd06657 22 LDNFIKIGEGSTG--IVCIATVKSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLVG-------- 89 (292)
T ss_pred hhhHHHcCCCCCe--EEEEEEEcCCCeEEEEEEecccc--hhHHHHHHHHHHHHHhcCCcchhheeeEEEeC--------
Confidence 44445788888 8 99999999999999999986432 23456788999999999999999999999863
Q ss_pred cEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 100 ITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 100 ~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
.+.|+||||+ ++|.+++..... ....+..++.|++.||.|||+ .+++||||+|+||+++.+|.++|+|||++.
T Consensus 90 ~~~~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~ql~~~l~~lH~-~givH~dl~p~Nilv~~~~~~~l~dfg~~~ 164 (292)
T cd06657 90 DELWVVMEFLEGGALTDIVTHTRM----NEEQIAAVCLAVLKALSVLHA-QGVIHRDIKSDSILLTHDGRVKLSDFGFCA 164 (292)
T ss_pred CEEEEEEecCCCCcHHHHHhcCCC----CHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECCCCCEEEcccccce
Confidence 4899999999 468877755332 334466779999999999996 899999999999999999999999999987
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh------------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE------------ 245 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~------------ 245 (771)
........ .........|++||...+ ..++.++|+||||+++|++++|..|+....
T Consensus 165 ~~~~~~~~------~~~~~~~~~y~~pE~~~~------~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~ 232 (292)
T cd06657 165 QVSKEVPR------RKSLVGTPYWMAPELISR------LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL 232 (292)
T ss_pred eccccccc------ccccccCccccCHHHhcC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhC
Confidence 65432110 011123347999998765 245678999999999999999998874321
Q ss_pred ---hhccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 246 ---LRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 246 ---l~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
......++..+.+++.+||..+|.+||++.+++.| +||..
T Consensus 233 ~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~-~~~~~ 275 (292)
T cd06657 233 PPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH-PFLAK 275 (292)
T ss_pred CcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcC-hHHhc
Confidence 11224567889999999999999999999999998 55543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.1e-28 Score=253.45 Aligned_cols=235 Identities=15% Similarity=0.154 Sum_probs=173.9
Q ss_pred CCCCCCC-CceEEEEeEECC---CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCccc
Q 004157 25 DPYPSAW-GSWSHFQGTSKD---DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKI 100 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~---~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~ 100 (771)
+.||.|+ | +||+|.... ++..|+||.+.... .......+.+|+..++.++||||+++++.+...+ .
T Consensus 1 ~~lg~g~~g--~v~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-------~ 70 (262)
T cd05058 1 RVIGKGHFG--CVYHGTLIDSDGQKIHCAVKSLNRIT-DLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSE-------G 70 (262)
T ss_pred CcccccCCc--eEEEEEEecCCCceEEEEEEecCccC-CHHHHHHHHHHHHHHccCCCCCcceEEEEeecCC-------C
Confidence 3578887 8 899998654 34579999986422 2234567888999999999999999999765432 2
Q ss_pred EEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccc
Q 004157 101 TIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (771)
Q Consensus 101 ~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~ 178 (771)
..|+||||+ ++|.+++...... .....+...+.||+.||.|||+ .+++||||||+||+++.++.+||+|||+++.
T Consensus 71 ~~~lv~e~~~~~~L~~~~~~~~~~--~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlk~~nili~~~~~~kl~dfg~~~~ 147 (262)
T cd05058 71 SPLVVLPYMKHGDLRNFIRSETHN--PTVKDLIGFGLQVAKGMEYLAS-KKFVHRDLAARNCMLDESFTVKVADFGLARD 147 (262)
T ss_pred CcEEEEecCCCCCHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHh-CCccccccCcceEEEcCCCcEEECCcccccc
Confidence 578999999 5799998764322 1223344557899999999996 8999999999999999999999999999876
Q ss_pred cCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCC-CCCChhhh-----------
Q 004157 179 FDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM-RLSKTEEL----------- 246 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~-~p~~~~~l----------- 246 (771)
........ .........+..|+|||...+ ..++.++|+|||||++|||++|+ +++.....
T Consensus 148 ~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~ 219 (262)
T cd05058 148 IYDKEYYS--VHNHTGAKLPVKWMALESLQT------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGR 219 (262)
T ss_pred ccCCccee--ecccccCcCCccccChhHhcc------CccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCC
Confidence 54321100 000111122347999998765 35667899999999999999954 55532211
Q ss_pred --hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 --RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 --~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....+|..+.+++.+||..+|++||++.++++.
T Consensus 220 ~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~ 255 (262)
T cd05058 220 RLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSR 255 (262)
T ss_pred CCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 1123467889999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-27 Score=252.92 Aligned_cols=238 Identities=16% Similarity=0.245 Sum_probs=184.4
Q ss_pred CceecCCCCCCC-CceEEEEeEECC-CCCcEEEEEEeCCC--------CchhHHHHHHHHHHHHhc-CCCCCeeEEeeeE
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKD-DGSPVSIFSISGTN--------AQDGHLAAARNGVKRLRT-VRHPNILAFLHST 88 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~-~g~~VaIK~~~~~~--------~~~~~~~~~~~ei~~Lk~-LrHPnIlkv~d~~ 88 (771)
.|++.+.||.|+ | .||.|.++. .++.|+||.+.... ..+.....+.+|++.+++ ++||||+++++.+
T Consensus 1 ~y~~~~~ig~G~~~--~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~ 78 (269)
T cd08528 1 EYAVLEHLGSGAFG--CVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTF 78 (269)
T ss_pred CchhhhhhcCCCCc--eEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeE
Confidence 488999999998 8 999999987 67899999886432 122344556778888875 7999999999998
Q ss_pred EecccCcCCcccEEEEEecCC--cchHHHHHHhCC-CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCC
Q 004157 89 EVENIDATSTKITIYIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT 165 (771)
Q Consensus 89 e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~ 165 (771)
+.+ ...|+||||+ ++|.+++..... ........++..+.|++.+|.|||+..+++||||+|+||+++.+
T Consensus 79 ~~~--------~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~ 150 (269)
T cd08528 79 LEN--------DRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGED 150 (269)
T ss_pred ccC--------CeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCC
Confidence 763 4899999999 478887754321 11223344566689999999999954789999999999999999
Q ss_pred CcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh
Q 004157 166 LDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE 245 (771)
Q Consensus 166 G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~ 245 (771)
+.+||+|||++....... ......++..|++||...+ ..++.++|+||||+++|+|++|.+|+....
T Consensus 151 ~~~~l~dfg~~~~~~~~~-------~~~~~~~~~~~~~Pe~~~~------~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~ 217 (269)
T cd08528 151 DKVTITDFGLAKQKQPES-------KLTSVVGTILYSCPEIVKN------EPYGEKADVWAFGCILYQMCTLQPPFYSTN 217 (269)
T ss_pred CcEEEecccceeeccccc-------ccccccCcccCcChhhhcC------CCCchHHHHHHHHHHHHHHHhCCCcccccC
Confidence 999999999997654421 0112234558999999876 346678999999999999999998875432
Q ss_pred hhc--------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 246 LRN--------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 246 l~~--------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
... ...++..+.+++.+|+..+|.+||++.++..+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 218 MLSLATKIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAM 266 (269)
T ss_pred HHHHHHHHhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence 210 12456789999999999999999999998654
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.1e-28 Score=253.22 Aligned_cols=226 Identities=19% Similarity=0.212 Sum_probs=178.8
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|++.+.+|.|+ | .||.|. .+++.|+||.+.... ....+.+|+..++.++||||+++++.+..+
T Consensus 7 ~~~~~~~lg~g~~g--~v~~~~--~~~~~~~iK~~~~~~----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------- 71 (254)
T cd05083 7 KLTLGEIIGEGEFG--AVLQGE--YTGQKVAVKNIKCDV----TAQAFLEETAVMTKLHHKNLVRLLGVILHN------- 71 (254)
T ss_pred HceeeeeeccCCCC--ceEecc--cCCCceEEEeecCcc----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-------
Confidence 599999999998 8 899986 368899999986432 234678899999999999999999988642
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..|+||||+ ++|.+++....... .....+..++.|++.||.|||+ .+++||||+|+||+++.+|.+||+|||++
T Consensus 72 --~~~~v~e~~~~~~L~~~l~~~~~~~-~~~~~~~~~~~qi~~al~~lH~-~~~~H~dl~p~nili~~~~~~kl~Dfg~~ 147 (254)
T cd05083 72 --GLYIVMELMSKGNLVNFLRTRGRAL-VSVIQLLQFSLDVAEGMEYLES-KKLVHRDLAARNILVSEDGVAKVSDFGLA 147 (254)
T ss_pred --CcEEEEECCCCCCHHHHHHhcCcCC-CCHHHHHHHHHHHHHHHHHHHh-CCeeccccCcceEEEcCCCcEEECCCccc
Confidence 479999999 58999987654221 2233455568999999999996 99999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhhh--------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR-------- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l~-------- 247 (771)
....... .....+..|+|||.+.+ ..++.+.|+|||||++|+|++ |.+||......
T Consensus 148 ~~~~~~~---------~~~~~~~~y~~pe~~~~------~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~ 212 (254)
T cd05083 148 RVGSMGV---------DNSKLPVKWTAPEALKH------KKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEK 212 (254)
T ss_pred eeccccC---------CCCCCCceecCHHHhcc------CCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhC
Confidence 7543211 01122457999998865 356678999999999999997 77777433211
Q ss_pred -----ccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 248 -----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 248 -----~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
....+|..+.+++.+|++.+|..||++.++++
T Consensus 213 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 213 GYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred CCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 12346778999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.3e-28 Score=255.54 Aligned_cols=237 Identities=14% Similarity=0.137 Sum_probs=178.7
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCc----EEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSP----VSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~----VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
..|++.+.||.|+ | +||+|++..+|+. |++|.+.... .......+.+|+..+++++||||+++++++..
T Consensus 7 ~~~~~~~~lg~G~~~--~vy~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~--- 80 (279)
T cd05111 7 TELRKLKLLGSGVFG--TVHKGIWIPEGDSIKIPVAIKTIQDRS-GRQTFQEITDHMLAMGSLDHAYIVRLLGICPG--- 80 (279)
T ss_pred hhceeccccCccCCc--ceEEEEEcCCCCceeeEEEEeeccccc-chHHHHHHHHHHHHHhcCCCCCcceEEEEECC---
Confidence 4689999999998 8 8999999888774 6777765322 22334567788999999999999999998753
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEE
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~ 171 (771)
...++++||+ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.++.+||+
T Consensus 81 ------~~~~~i~e~~~~gsL~~~l~~~~~~--~~~~~~~~i~~qi~~~l~~lH~-~~iiH~dlkp~nili~~~~~~kl~ 151 (279)
T cd05111 81 ------ASLQLVTQLSPLGSLLDHVRQHRDS--LDPQRLLNWCVQIAKGMYYLEE-HRMVHRNLAARNILLKSDSIVQIA 151 (279)
T ss_pred ------CccEEEEEeCCCCcHHHHHHhcccC--CCHHHHHHHHHHHHHHHHHHHH-CCEeccccCcceEEEcCCCcEEEc
Confidence 2578899998 5899998764321 2233455568999999999996 899999999999999999999999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhhh---
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR--- 247 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l~--- 247 (771)
|||+++....... .........+..|++||+..+ ..++.++|+|||||++||+++ |..|+......
T Consensus 152 Dfg~~~~~~~~~~----~~~~~~~~~~~~y~~pE~~~~------~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~ 221 (279)
T cd05111 152 DFGVADLLYPDDK----KYFYSEHKTPIKWMALESILF------GRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVP 221 (279)
T ss_pred CCccceeccCCCc----ccccCCCCCcccccCHHHhcc------CCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 9999976543211 111111122347999999875 356789999999999999997 88777432211
Q ss_pred ---c-------cCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 ---N-------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 ---~-------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
. ....+..+..++.+|+..+|..||++.++++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~ 264 (279)
T cd05111 222 DLLEKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANE 264 (279)
T ss_pred HHHHCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 0 11234567888999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.9e-28 Score=251.70 Aligned_cols=233 Identities=15% Similarity=0.156 Sum_probs=181.1
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|++.+.+|.|+ | .||+|.+. ++..++||++...... ...+.+|++.+++++||||++++++++..
T Consensus 5 ~~~~~~~ig~g~~g--~v~~~~~~-~~~~~~~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 71 (256)
T cd05112 5 ELTLVQEIGSGQFG--LVWLGYWL-EKRKVAIKTIREGAMS---EEDFIEEAQVMMKLSHPKLVQLYGVCTER------- 71 (256)
T ss_pred HeEEEeeecCcccc--eEEEEEEe-CCCeEEEEECCCCCCC---HHHHHHHHHHHHhCCCCCeeeEEEEEccC-------
Confidence 688999999998 8 89999886 4778999998754332 23577899999999999999999998763
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+|+|+||+ +.|.+++..... ....+.+...+.|++.+|.|||+ .+++||||+|+||+++.++.+||+|||++
T Consensus 72 -~~~~~v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lH~-~~i~h~dl~p~ni~i~~~~~~~l~d~g~~ 147 (256)
T cd05112 72 -SPICLVFEFMEHGCLSDYLRAQRG--KFSQETLLGMCLDVCEGMAYLES-SNVIHRDLAARNCLVGENQVVKVSDFGMT 147 (256)
T ss_pred -CceEEEEEcCCCCcHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHHH-CCccccccccceEEEcCCCeEEECCCcce
Confidence 3789999999 468888875431 12344456668899999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhhh-------c
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR-------N 248 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l~-------~ 248 (771)
.......... ......+..|++||+..+ ..++.++|+|||||++||+++ |..|+...... .
T Consensus 148 ~~~~~~~~~~-----~~~~~~~~~~~aPe~~~~------~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~ 216 (256)
T cd05112 148 RFVLDDQYTS-----STGTKFPVKWSSPEVFSF------SKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINA 216 (256)
T ss_pred eecccCcccc-----cCCCccchhhcCHhHhcc------CCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhC
Confidence 7654321100 011122347999999875 356678999999999999998 77777533211 1
Q ss_pred ------cCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 249 ------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 249 ------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
....+..+.+++.+||+.+|++||++.++++.
T Consensus 217 ~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 217 GFRLYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred CCCCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence 12246778999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-28 Score=257.01 Aligned_cols=226 Identities=17% Similarity=0.198 Sum_probs=171.8
Q ss_pred CCCCCCC-CceEEEEeEECCCCC-------cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDGS-------PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g~-------~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
+.||.|+ | +||+|.++.++. .|++|.+.... ....+.+.+|+.+++.+.||||+++++.+...
T Consensus 1 ~~lg~G~~~--~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~----- 71 (258)
T cd05078 1 ESLGQGTFT--KIFKGIRREVGDYGELHKTEVLLKVLDKSH--RNYSESFFEAASMMSQLSHKHLVLNYGVCVCG----- 71 (258)
T ss_pred CCCCcccch--hheeeeecccccccccccchhhHHhhcchh--HHHHHHHHHHHHHHHhCCCCChhheeeEEEeC-----
Confidence 4688887 8 999999876554 48888876432 23455678899999999999999999999863
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCc-------
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD------- 167 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~------- 167 (771)
...|+||||+ ++|..++..... ......+..++.||+.||.|||+ .+++||||||+||+++.++.
T Consensus 72 ---~~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~-~~iiH~dlkp~nili~~~~~~~~~~~~ 145 (258)
T cd05078 72 ---DESIMVQEYVKFGSLDTYLKKNKN--LINISWKLEVAKQLAWALHFLED-KGLTHGNVCAKNVLLIREEDRKTGNPP 145 (258)
T ss_pred ---CCcEEEEecCCCCcHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCccceEEEecccccccCCCc
Confidence 3789999999 579999876542 12334455669999999999996 99999999999999988776
Q ss_pred -EEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCC-CCCChhh
Q 004157 168 -WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM-RLSKTEE 245 (771)
Q Consensus 168 -~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~-~p~~~~~ 245 (771)
+||+|||++....... .......|+|||++.+. ..++.++|+|||||++|++++|. +++....
T Consensus 146 ~~~l~d~g~~~~~~~~~----------~~~~~~~y~aPE~~~~~-----~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~ 210 (258)
T cd05078 146 FIKLSDPGISITVLPKE----------ILLERIPWVPPECIENP-----QNLSLAADKWSFGTTLWEIFSGGDKPLSALD 210 (258)
T ss_pred eEEecccccccccCCch----------hccccCCccCchhccCC-----CCCCchhhHHHHHHHHHHHHcCCCCChhhcc
Confidence 5899999876543211 11233479999998753 34567899999999999999985 4443211
Q ss_pred h-------hccCC----CCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 246 L-------RNTAS----IPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 246 l-------~~~~~----IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
. ..... ++..+.+++.+||+.+|++||++.++++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 256 (258)
T cd05078 211 SQKKLQFYEDRHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRD 256 (258)
T ss_pred HHHHHHHHHccccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 1 11122 33568899999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.2e-29 Score=274.44 Aligned_cols=242 Identities=15% Similarity=0.211 Sum_probs=190.1
Q ss_pred CCCCc-eecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCC--CCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecc
Q 004157 17 KDLPY-NIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGT--NAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (771)
Q Consensus 17 ~~~~Y-~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~--~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~ 92 (771)
++.+| ...+.+|.|. - +||+|.+-.+|-.||--.+... ......++++..|++.||.|+||||+++|++|.+..
T Consensus 37 p~gRy~k~~evLGrGafK--tVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~ 114 (632)
T KOG0584|consen 37 PTGRYLKFDEVLGRGAFK--TVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTD 114 (632)
T ss_pred CCCceeehhhhcccccce--eeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCC
Confidence 44555 5567889987 5 9999999999988874433321 122355789999999999999999999999999876
Q ss_pred cCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcC-CCceecCCCCCCEEEcC-CCcE
Q 004157 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNND-CKLVHGNVCLSSVVVTQ-TLDW 168 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~-~~ivH~dIkp~NI~v~~-~G~~ 168 (771)
+.++.+|||.+ |.|..|+++.+.- ....++.+.+||++||.|||+. --|||||||.+|||||. .|++
T Consensus 115 ------n~~in~iTEL~TSGtLr~Y~kk~~~v---n~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~V 185 (632)
T KOG0584|consen 115 ------NKTINFITELFTSGTLREYRKKHRRV---NIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEV 185 (632)
T ss_pred ------CceeeeeeecccCCcHHHHHHHhccC---CHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCce
Confidence 45899999999 6799999987653 3345666699999999999973 26999999999999995 5999
Q ss_pred EEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh-h--
Q 004157 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-E-- 245 (771)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~-~-- 245 (771)
||||+|+++....... ..-++++.|||||+... .|...+||||||+.|.||.++..|+.-. .
T Consensus 186 KIGDLGLAtl~r~s~a--------ksvIGTPEFMAPEmYEE-------~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~A 250 (632)
T KOG0584|consen 186 KIGDLGLATLLRKSHA--------KSVIGTPEFMAPEMYEE-------NYNELVDVYAFGMCMLEMVTSEYPYSECTNPA 250 (632)
T ss_pred eecchhHHHHhhcccc--------ceeccCccccChHHHhh-------hcchhhhhhhhhHHHHHHHhccCChhhhCCHH
Confidence 9999999988765311 11255669999999874 6778999999999999999999887421 1
Q ss_pred --hhc-c--------CCCC-cchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 246 --LRN-T--------ASIP-KSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 246 --l~~-~--------~~IP-~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
++. + ..+. +.+..+|.+||.. .+.|+++.++|.| .||..
T Consensus 251 QIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d-~Ff~~ 301 (632)
T KOG0584|consen 251 QIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELLKD-PFFDE 301 (632)
T ss_pred HHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhhC-hhhcc
Confidence 111 1 1222 3588999999999 9999999999998 67753
|
|
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.4e-28 Score=265.63 Aligned_cols=243 Identities=16% Similarity=0.199 Sum_probs=181.7
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEE-----CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEE
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTS-----KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTE 89 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~-----k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e 89 (771)
+..+|++++.||.|+ | +||+|.+ ..+++.|+||++...... .....+.+|+.+|+++ +||||+++++++.
T Consensus 5 ~~~~~~~~~~lG~G~fg--~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 81 (343)
T cd05103 5 PRDRLKLGKPLGRGAFG--QVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHRALMSELKILIHIGHHLNVVNLLGACT 81 (343)
T ss_pred chhHhcccccccCCccc--eEEEEeeccCCccccceeEEEEEeccCCCh-HHHHHHHHHHHHHHhccCCccHhhhcceee
Confidence 344699999999999 9 9999984 356789999999754322 3456788899999999 6899999999886
Q ss_pred ecccCcCCcccEEEEEecCC--cchHHHHHHhCCC---------------------------------------------
Q 004157 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLE--------------------------------------------- 122 (771)
Q Consensus 90 ~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~--------------------------------------------- 122 (771)
.+ +..+|+||||| ++|.+++......
T Consensus 82 ~~-------~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (343)
T cd05103 82 KP-------GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVE 154 (343)
T ss_pred cC-------CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccC
Confidence 54 24689999999 5798888653210
Q ss_pred -------------------CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCCCC
Q 004157 123 -------------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNN 183 (771)
Q Consensus 123 -------------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~ 183 (771)
.......+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|||++.......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~ 233 (343)
T cd05103 155 EKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLAS-RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDP 233 (343)
T ss_pred CCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCccCeEEEcCCCcEEEEecccccccccCc
Confidence 001122234458899999999996 899999999999999999999999999987653321
Q ss_pred CCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhh----h----h------c
Q 004157 184 EAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE----L----R------N 248 (771)
Q Consensus 184 ~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~----l----~------~ 248 (771)
.. ........+..|+|||++.+ ..++.++|+|||||++|++++ |..|+.... . . .
T Consensus 234 ~~----~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 303 (343)
T cd05103 234 DY----VRKGDARLPLKWMAPETIFD------RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA 303 (343)
T ss_pred ch----hhcCCCCCCcceECcHHhcC------CCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCC
Confidence 10 00011122346999998865 356788999999999999997 777764321 0 0 0
Q ss_pred cCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 249 TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 249 ~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
...++..+.+++.+|+..+|.+||++.+++++
T Consensus 304 ~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 304 PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred CCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 12245578889999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.5e-28 Score=252.27 Aligned_cols=235 Identities=16% Similarity=0.176 Sum_probs=181.7
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
..-+|++.+++|.|+ | .||.|... .+..|+||.+... ......+.+|++++++++||||+++++.+.. .
T Consensus 4 ~~~~~~~~~~lg~g~~~--~vy~~~~~-~~~~~~iK~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~--- 73 (260)
T cd05073 4 PRESLKLEKKLGAGQFG--EVWMATYN-KHTKVAVKTMKPG---SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-E--- 73 (260)
T ss_pred cccceeEEeEecCccce--EEEEEEec-CCccEEEEecCCC---hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-C---
Confidence 456799999999998 7 99999865 5677999987643 2234567889999999999999999999875 2
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..|++|||+ ++|.+++...... ......+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+||
T Consensus 74 -----~~~~v~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~l~~aL~~lH~-~~i~H~dl~p~ni~i~~~~~~~l~d~ 146 (260)
T cd05073 74 -----PIYIITEFMAKGSLLDFLKSDEGS-KQPLPKLIDFSAQIAEGMAFIEQ-RNYIHRDLRAANILVSASLVCKIADF 146 (260)
T ss_pred -----CeEEEEEeCCCCcHHHHHHhCCcc-ccCHHHHHHHHHHHHHHHHHHHh-CCccccccCcceEEEcCCCcEEECCC
Confidence 579999999 4799998764321 12233355568999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL------ 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l------ 246 (771)
|++......... .......+..|+|||++.. ..++.++|+|||||++|++++ |..||.....
T Consensus 147 ~~~~~~~~~~~~-----~~~~~~~~~~y~~PE~~~~------~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~ 215 (260)
T cd05073 147 GLARVIEDNEYT-----AREGAKFPIKWTAPEAINF------GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA 215 (260)
T ss_pred cceeeccCCCcc-----cccCCcccccccCHhHhcc------CCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence 998765432110 0111122347999999875 356678999999999999998 7777753211
Q ss_pred -------hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 247 -------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 247 -------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.....+|..+.+++.+|+..+|.+||++.++++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 216 LERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred HhCCCCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 112356778999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.2e-28 Score=280.23 Aligned_cols=465 Identities=18% Similarity=0.218 Sum_probs=296.8
Q ss_pred CceecCCCCCCCCceEEEEeEECCCCCcEEEEEEeCCCCch--hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQD--GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~g~wtVy~g~~k~~g~~VaIK~~~~~~~~~--~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.|...+.+|.+. ..+|.+|++++ | .|.||+|-+....- ...++...|++ .+.++|||++.|..+.+++
T Consensus 24 e~~~~~~LGstR-FlKv~r~k~~e-G-~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~------ 93 (1431)
T KOG1240|consen 24 ECHYVENLGSTR-FLKVARAKDRE-G-LVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTD------ 93 (1431)
T ss_pred ceeeecccCchh-hhhhhhccCCC-c-eEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhh------
Confidence 466777788765 22788887652 4 49999998754221 22333334555 6777999999999998764
Q ss_pred cccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
...|+|-+|+ ..|++.|..+++.. .-..+|+++||++||+.+|+ .|++|||||.+||+|+.-..+.|.||.--
T Consensus 94 --kAAylvRqyvkhnLyDRlSTRPFL~---~iEKkWiaFQLL~al~qcH~-~gVcHGDIKsENILiTSWNW~~LtDFAsF 167 (1431)
T KOG1240|consen 94 --KAAYLVRQYVKHNLYDRLSTRPFLV---LIEKKWIAFQLLKALSQCHK-LGVCHGDIKSENILITSWNWLYLTDFASF 167 (1431)
T ss_pred --HHHHHHHHHHhhhhhhhhccchHHH---HHHHHHHHHHHHHHHHHHHH-cCccccccccceEEEeeechhhhhccccc
Confidence 3679999999 57999998887643 23367889999999999996 99999999999999999999999999865
Q ss_pred cccCCCCCCCCCCccc--cccccCCCCCChhcccccc--ccccCC---CCCcchHHHHHHHHHHHhh-CCCCCChhhhhc
Q 004157 177 SEFDGNNEAANGPMLQ--YAWLVGAQYKPVELAKSDW--TAVRKS---PPWSIDSWGLGCLIYELFS-GMRLSKTEELRN 248 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~--~~~~~~~~Y~aPE~~~~~~--~~~~~~---~~~~~Di~SLG~li~el~~-g~~p~~~~~l~~ 248 (771)
+..--..+. ...+.- -.......|.|||.+.... ....+. ...+.||||+||+|.|||. |.|+|...++-.
T Consensus 168 KPtYLPeDN-Padf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~a 246 (1431)
T KOG1240|consen 168 KPTYLPEDN-PADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLA 246 (1431)
T ss_pred CCccCCCCC-cccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHh
Confidence 433221111 111110 1112234899999986522 111111 3578999999999999998 578887655422
Q ss_pred ------------cCCCC-cchHHHHHHHhccCCCCCCChHHHhhC------CCCCcchhhhhhhhhhhhc----------
Q 004157 249 ------------TASIP-KSLLPDYQRLLSSMPSRRLNSSKLIEN------SEYFQNKLVDTIHFMEILN---------- 299 (771)
Q Consensus 249 ------------~~~IP-~~l~~~i~~lL~~~P~~Rps~~~lL~~------~~fF~n~lv~~~~~L~~l~---------- 299 (771)
+..|+ ..+++++..|++.+|++|.+++++|+. +.||..-+.+.+..+..+.
T Consensus 247 Yr~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~~FP~yFy~FL~~Y~~~~~~~~~~~p~~~~~~ 326 (1431)
T KOG1240|consen 247 YRSGNADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQKYRGLVFPEYFYSFLYDYLDRFVPLTTSTPISDNTC 326 (1431)
T ss_pred HhccCccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHhhhccccHHHHHHHHHHHHHhcCCccccCccccccc
Confidence 12343 368999999999999999999999987 2344443333333332222
Q ss_pred ----------------------------------------cCChhhHHh-----------------hhhhchhhhcCC--
Q 004157 300 ----------------------------------------LKDSVEKDT-----------------FFRKLPNLAEQL-- 320 (771)
Q Consensus 300 ----------------------------------------~k~~~eK~~-----------------F~~~L~~~l~~f-- 320 (771)
..+.+|+.. +.++|......+
T Consensus 327 ~gs~i~d~~~~~~~p~n~~~~~~~~~~h~ln~~~~~~~~~~~S~De~~~~~~~al~~~r~~~~~l~~~~dl~~~~q~~~~ 406 (1431)
T KOG1240|consen 327 TGSTIEDNVKLLDGPTNKIYRDFSQICHCLNFPLIKDGGTITSSDEIIDSISKALEFSRHLIENLDVIQDLKPEKQLWTA 406 (1431)
T ss_pred cCcccccccccccCcccchhhhhhccccccccccccccccccCCcHHHHHHHHHHhhhhhhcccchhhhccchHHhcccc
Confidence 111111111 111111110100
Q ss_pred --------ChhhhhhhhHHHHHHHHhcCCC---CchhhHHHHHhccCCChhhhhhhhHHHHHHhhcCCcHHHHHHHHHhH
Q 004157 321 --------PRQIVLKKLLPLLASALEFGSA---AAPALTALLKMGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHI 389 (771)
Q Consensus 321 --------P~~~~~~kILP~Ll~~~~~~~~---~~~~L~~ll~i~~~l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l 389 (771)
|..-..-.+++.|...+..-.. ...+|.-+..++..++.|.--..|+|.++.||.+++..||...|+-|
T Consensus 407 ~~~~~~~~~~~~ga~l~vs~lts~IR~lk~~~tK~~ALeLl~~lS~~i~de~~LDRVlPY~v~l~~Ds~a~Vra~Al~Tl 486 (1431)
T KOG1240|consen 407 RSSPNIKDPKEEGAVLFVSVLTSCIRALKTIQTKLAALELLQELSTYIDDEVKLDRVLPYFVHLLMDSEADVRATALETL 486 (1431)
T ss_pred cCCcccCCccccceeeeHHHHHHHHHhhhcchhHHHHHHHHHHHhhhcchHHHHhhhHHHHHHHhcCchHHHHHHHHHHH
Confidence 1122223345555555543222 22344555667778888888899999999999999999999888888
Q ss_pred HHHHhh------cChhhhhhccHHHHHhhcCC-CcHHHHHHHHHHHHhhccC----------------CCh---------
Q 004157 390 DQYGQS------FSAQVVDEQVYPHVATGFAD-TSAFLREMTLKSMLVLAPK----------------LSQ--------- 437 (771)
Q Consensus 390 ~~~~~~------l~~~~v~~~I~p~l~~gf~D-~~~~iRe~tlk~i~~l~~k----------------L~~--------- 437 (771)
..++.. .+..++.+.|||++-....| ++..||-+-...|..++.- +++
T Consensus 487 t~~L~~Vr~~~~~daniF~eYlfP~L~~l~~d~~~~~vRiayAsnla~LA~tA~rFle~~q~~~~~g~~n~~nset~~~~ 566 (1431)
T KOG1240|consen 487 TELLALVRDIPPSDANIFPEYLFPHLNHLLNDSSAQIVRIAYASNLAQLAKTAYRFLELTQELRQAGMLNDPNSETAPEQ 566 (1431)
T ss_pred HHHHhhccCCCcccchhhHhhhhhhhHhhhccCccceehhhHHhhHHHHHHHHHHHHHHHHHHHhcccccCccccccccc
Confidence 777543 35668889999999998888 4545555444444333211 111
Q ss_pred --h----HHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCCcchhhh
Q 004157 438 --R----TISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGA 502 (771)
Q Consensus 438 --~----~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R~a 502 (771)
. .|...+=..+..|.+|+++-||-...--|+.|+-+.++..-..+|++-+- .-|.|..+.-|-|
T Consensus 567 ~~~~~~~~L~~~V~~~v~sLlsd~~~~Vkr~Lle~i~~LC~FFGk~ksND~iLshLi-TfLNDkDw~LR~a 636 (1431)
T KOG1240|consen 567 NYNTELQALHHTVEQMVSSLLSDSPPIVKRALLESIIPLCVFFGKEKSNDVILSHLI-TFLNDKDWRLRGA 636 (1431)
T ss_pred ccchHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHhhhcccccchHHHHH-HHhcCccHHHHHH
Confidence 1 11222223445555677777776666667777777666665666666666 6666666666654
|
|
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.3e-28 Score=253.67 Aligned_cols=226 Identities=17% Similarity=0.185 Sum_probs=169.7
Q ss_pred CCCCCCC-CceEEEEeEECCC------------CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEec
Q 004157 25 DPYPSAW-GSWSHFQGTSKDD------------GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~------------g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e 91 (771)
+.+|.|. | +||+|+.... ...|+||+++... ......+.+|+.+++.++||||+++++++..+
T Consensus 1 ~~lg~G~~~--~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~ 76 (262)
T cd05077 1 EHLGRGTRT--QIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH--RDISLAFFETASMMRQVSHKHIVLLYGVCVRD 76 (262)
T ss_pred CccccCCcc--eEeeeecccCCCccccccchhhceeEEEeecChhh--hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence 4678887 8 9999986422 2358889876532 23445678899999999999999999998753
Q ss_pred ccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCc--
Q 004157 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD-- 167 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~-- 167 (771)
...|+||||+ ++|..++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.
T Consensus 77 --------~~~~lv~e~~~~~~l~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~dlkp~Nill~~~~~~~ 145 (262)
T cd05077 77 --------VENIMVEEFVEFGPLDLFMHRKSD--VLTTPWKFKVAKQLASALSYLED-KDLVHGNVCTKNILLAREGIDG 145 (262)
T ss_pred --------CCCEEEEecccCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHhhh-CCeECCCCCcccEEEecCCccC
Confidence 3679999999 468777765321 12334455669999999999996 89999999999999987765
Q ss_pred -----EEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHh-hCCCCC
Q 004157 168 -----WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELF-SGMRLS 241 (771)
Q Consensus 168 -----~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~-~g~~p~ 241 (771)
+||+|||++....... ....+..|+|||++... ..++.++|+|||||++|||+ +|..|+
T Consensus 146 ~~~~~~~l~d~g~~~~~~~~~----------~~~~~~~y~aPE~~~~~-----~~~~~~~DiwslG~~l~el~~~~~~p~ 210 (262)
T cd05077 146 ECGPFIKLSDPGIPITVLSRQ----------ECVERIPWIAPECVEDS-----KNLSIAADKWSFGTTLWEICYNGEIPL 210 (262)
T ss_pred CCCceeEeCCCCCCccccCcc----------cccccccccChhhhcCC-----CCCCchhHHHHHHHHHHHHHhCCCCCC
Confidence 8999999886553211 11234579999987642 35677899999999999997 566666
Q ss_pred Chhhhh-----------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 242 KTEELR-----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 242 ~~~~l~-----------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
...... .....+..+.+++.+||+.+|.+||+..+++++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 211 KDKTLAEKERFYEGQCMLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred CCcchhHHHHHHhcCccCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 432211 112345678899999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.9e-28 Score=254.57 Aligned_cols=232 Identities=16% Similarity=0.203 Sum_probs=176.0
Q ss_pred CCCCCC-CceEEEEeEECCCC------CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 26 PYPSAW-GSWSHFQGTSKDDG------SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~~g------~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.+|.|+ | .||+|+.+..+ ..|+||.+..... ......+.+|+..++.++||||+++++++...
T Consensus 2 ~lg~g~~g--~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------- 71 (269)
T cd05044 2 FLGSGAFG--EVYEGTATDILGPGSGPIRVAVKTLRKGAT-DQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLN------- 71 (269)
T ss_pred ccccccce--eEEeeeecccccCcccceeehhhhhhcccc-hhhHHHHHHHHHHHHhcCCCCeeeEeeeecCC-------
Confidence 577776 7 89999987544 6899999865422 23455688899999999999999999998753
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCC----CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC-----c
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLE----GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL-----D 167 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~----~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G-----~ 167 (771)
...|+||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++|+||+|+||+++.++ .
T Consensus 72 -~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~-~~i~H~dl~p~nil~~~~~~~~~~~ 149 (269)
T cd05044 72 -EPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQ-MHFIHRDLAARNCLVSEKGYDADRV 149 (269)
T ss_pred -CCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHh-CCcccCCCChheEEEecCCCCCCcc
Confidence 3789999999 5799998764321 112233455668999999999996 8999999999999999888 8
Q ss_pred EEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhh-
Q 004157 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE- 245 (771)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~- 245 (771)
+||+|||++.......... .......+..|+|||++.+. .++.++|+|||||++|+|++ |..|+....
T Consensus 150 ~~l~dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~il~ellt~g~~p~~~~~~ 219 (269)
T cd05044 150 VKIGDFGLARDIYKSDYYR----KEGEGLLPVRWMAPESLLDG------KFTTQSDVWSFGVLMWEILTLGQQPYPALNN 219 (269)
T ss_pred eEECCcccccccccccccc----cCcccCCCccccCHHHHccC------CcccchhHHHHHHHHHHHHHcCCCCCcccCH
Confidence 9999999987654321100 01111234579999998763 56789999999999999998 877764321
Q ss_pred ------------hhccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 246 ------------LRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 246 ------------l~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
......+|..+.+++.+||..+|.+||++.++++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 220 QEVLQHVTAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred HHHHHHHhcCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 1112456788999999999999999999999875
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=254.89 Aligned_cols=232 Identities=14% Similarity=0.195 Sum_probs=177.2
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHH---HHHHhcCCCCCeeEEeeeEEecccCcCCcccE
Q 004157 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNG---VKRLRTVRHPNILAFLHSTEVENIDATSTKIT 101 (771)
Q Consensus 27 ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~e---i~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~ 101 (771)
||.|+ | +||+|.+..+++.|+||++.++.... .......+| ++.++...||+|+++++.++.. ..
T Consensus 2 ig~g~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--------~~ 71 (278)
T cd05606 2 IGRGGFG--EVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTP--------DK 71 (278)
T ss_pred cccCCCe--EEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecC--------CE
Confidence 57776 7 99999999999999999998653321 111223333 4455566899999999999864 38
Q ss_pred EEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccccc
Q 004157 102 IYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (771)
Q Consensus 102 iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~ 179 (771)
+|+||||+ ++|..++..... .....+..++.|++.||.|||+ .+++||||+|+||+++.++.+||+|||++...
T Consensus 72 ~~~v~e~~~g~~L~~~l~~~~~---l~~~~~~~~~~ql~~~l~~lH~-~~i~H~di~p~nili~~~~~~kl~dfg~~~~~ 147 (278)
T cd05606 72 LSFILDLMNGGDLHYHLSQHGV---FSEAEMRFYAAEIILGLEHMHN-RFVVYRDLKPANILLDEHGHVRISDLGLACDF 147 (278)
T ss_pred EEEEEecCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCEEcCCCCHHHEEECCCCCEEEccCcCcccc
Confidence 99999999 468888865432 2344566779999999999996 89999999999999999999999999998765
Q ss_pred CCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh------hh------
Q 004157 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE------LR------ 247 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~------l~------ 247 (771)
.... .....+...|+|||++.++ ..++.++|+|||||++|+|++|..||.... ..
T Consensus 148 ~~~~--------~~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 214 (278)
T cd05606 148 SKKK--------PHASVGTHGYMAPEVLQKG-----VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM 214 (278)
T ss_pred CccC--------CcCcCCCcCCcCcHHhcCC-----CCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhcc
Confidence 4321 1112345589999998643 246678999999999999999998875331 00
Q ss_pred ---ccCCCCcchHHHHHHHhccCCCCCC-----ChHHHhhCCCCCcc
Q 004157 248 ---NTASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENSEYFQN 286 (771)
Q Consensus 248 ---~~~~IP~~l~~~i~~lL~~~P~~Rp-----s~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||..+|.+|+ ++.++++| +||+.
T Consensus 215 ~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~-~~~~~ 260 (278)
T cd05606 215 AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH-PFFRS 260 (278)
T ss_pred CCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC-ccccC
Confidence 0123567889999999999999999 99999998 56654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-27 Score=252.21 Aligned_cols=238 Identities=16% Similarity=0.205 Sum_probs=169.8
Q ss_pred CCCCCC-CceEEEEeEECC--CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEE
Q 004157 26 PYPSAW-GSWSHFQGTSKD--DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITI 102 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~--~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~i 102 (771)
+||.|+ | +||+|+... ....|+||.+.... .......+.+|++.++.++||||+++++.+... ..+
T Consensus 2 ~lg~G~fg--~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~--------~~~ 70 (269)
T cd05042 2 EIGNGWFG--KVLLGEAHRGMSKARVVVKELRASA-TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIES--------IPY 70 (269)
T ss_pred cCCccCCc--eEEEEEEecCCCCeEEEEeecCccC-ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCC--------Cce
Confidence 578888 8 999997543 34568888765432 233455678899999999999999999998753 378
Q ss_pred EEEecCC--cchHHHHHHhCCC--CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccc
Q 004157 103 YIVTEPV--MPLSEKIKELGLE--GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (771)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~--~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~ 178 (771)
|+||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++||||||+|||++.++.+||+|||++..
T Consensus 71 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~ 149 (269)
T cd05042 71 LLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ-ADFIHSDLALRNCQLTADLSVKIGDYGLALE 149 (269)
T ss_pred EEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHh-cCEecccccHhheEecCCCcEEEeccccccc
Confidence 9999999 5899998775421 112234456679999999999996 8999999999999999999999999999865
Q ss_pred cCCCCCCCCCCccccccccCCCCCChhcccccccc-ccCCCCCcchHHHHHHHHHHHhh-CCCCCChhh----hh----c
Q 004157 179 FDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTA-VRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE----LR----N 248 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~-~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~----l~----~ 248 (771)
....... ........+..|+|||+....... ....++.++|+|||||++|||++ |..|+.... +. .
T Consensus 150 ~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~ 225 (269)
T cd05042 150 QYPEDYY----ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVRE 225 (269)
T ss_pred cccchhe----eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhc
Confidence 4321100 001111233479999997542111 11345679999999999999998 556653221 10 0
Q ss_pred ----------cCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 249 ----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 249 ----------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
...++..+..++..|+ .+|.+||++.++++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~ 266 (269)
T cd05042 226 QDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHEL 266 (269)
T ss_pred cCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHH
Confidence 0134455666777776 599999999998753
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-29 Score=296.94 Aligned_cols=245 Identities=17% Similarity=0.264 Sum_probs=198.6
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
-.++++-+..||.|. | .||-|.+.++|+-.|+|.+..........+.+.+|+++|..|+|||++++|++-.+
T Consensus 1233 V~~rWqrg~~Ig~G~fG--~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvH----- 1305 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFG--KVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVH----- 1305 (1509)
T ss_pred ceeeeccccccCCccee--eeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeec-----
Confidence 368899999999998 9 99999999999999999998765555667888999999999999999999988665
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
...+||.|||| +.|.+.++..+.. .+....|+..|++.||.|||+ .|||||||||.|||++.+|.+|++||
T Consensus 1306 ---Rekv~IFMEyC~~GsLa~ll~~gri~---dE~vt~vyt~qll~gla~LH~-~gIVHRDIK~aNI~Ld~~g~iK~~DF 1378 (1509)
T KOG4645|consen 1306 ---REKVYIFMEYCEGGSLASLLEHGRIE---DEMVTRVYTKQLLEGLAYLHE-HGIVHRDIKPANILLDFNGLIKYGDF 1378 (1509)
T ss_pred ---HHHHHHHHHHhccCcHHHHHHhcchh---hhhHHHHHHHHHHHHHHHHHh-cCceecCCCccceeeecCCcEEeecc
Confidence 34789999999 5798888765432 234567889999999999997 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh--------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-------- 245 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-------- 245 (771)
|.+..+...-....+.+ ....++.-|||||++.+.-. ++..-+.|||||||++.||.+|+.|+..-+
T Consensus 1379 Gsa~ki~~~~~~~~~el--~~~~GT~~YMAPEvit~t~~---kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~ 1453 (1509)
T KOG4645|consen 1379 GSAVKIKNNAQTMPGEL--QSMMGTPMYMAPEVITGTKG---KGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYH 1453 (1509)
T ss_pred cceeEecCchhcCCHHH--HhhcCCchhcCchhhccccc---CCCCcchhhhcccceEEEeecCCCchhhccchhHHHhH
Confidence 99988765421111111 12355668999999987422 455679999999999999999999875322
Q ss_pred --hhccCCCCc----chHHHHHHHhccCCCCCCChHHHhhC
Q 004157 246 --LRNTASIPK----SLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 246 --l~~~~~IP~----~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....++|. .-.+++.+||..||++|.++.|+++|
T Consensus 1454 V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1454 VAAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred HhccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 112345554 45677999999999999999999998
|
|
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.9e-28 Score=252.12 Aligned_cols=239 Identities=17% Similarity=0.221 Sum_probs=183.0
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC---chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA---QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~---~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
+|.+.+.||.|+ | +||++++...+..+.+|++..... .......+.+|+.+++.++||||+++++.+...
T Consensus 1 ~y~i~~~ig~g~~g--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---- 74 (260)
T cd08222 1 RYILQQRLGKGSFG--TVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLER---- 74 (260)
T ss_pred CceeeeeecCCCCc--eEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcC----
Confidence 599999999998 8 999999988877787777654221 122334566789999999999999999998763
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCC-CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
...|+||||+ ++|.+++..... ........+..++.|++.||.|||+ .+++||||+|+||+++. +.+||+|
T Consensus 75 ----~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~-~~i~h~~l~~~nili~~-~~~~l~d 148 (260)
T cd08222 75 ----DAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQ-RRILHRDLKAKNIFLKN-NLLKIGD 148 (260)
T ss_pred ----CceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH-cCccccCCChhheEeec-CCEeecc
Confidence 3789999999 478888765322 1223344566679999999999996 89999999999999975 6799999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-----
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----- 247 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~----- 247 (771)
||++......... .........|++||...+ ..++.++|+||||+++|++++|..++......
T Consensus 149 ~g~~~~~~~~~~~------~~~~~~~~~~~~pe~~~~------~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~ 216 (260)
T cd08222 149 FGVSRLLMGSCDL------ATTFTGTPYYMSPEALKH------QGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLR 216 (260)
T ss_pred cCceeecCCCccc------ccCCCCCcCccCHHHHcc------CCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHH
Confidence 9998766432111 111123447999998765 34567899999999999999999887543211
Q ss_pred --------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 248 --------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 248 --------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
....++..+.+++.+|+..+|.+||++.++++|++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 259 (260)
T cd08222 217 IVEGPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPF 259 (260)
T ss_pred HHcCCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCC
Confidence 01245678889999999999999999999999854
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-27 Score=267.68 Aligned_cols=243 Identities=16% Similarity=0.161 Sum_probs=182.9
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEEC-----CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeE
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSK-----DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHST 88 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k-----~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~ 88 (771)
++...|.+++.||.|+ | .||+|+++ ..+..|+||++...... ...+.+.+|+++|.+|. ||||+++++.+
T Consensus 34 ~~~~~~~~~~~lG~G~fG--~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~-~~~~~~~~E~~~l~~l~~H~niv~~~~~~ 110 (401)
T cd05107 34 MPRDNLVLGRTLGSGAFG--RVVEATAHGLSHSQSTMKVAVKMLKSTARS-SEKQALMSELKIMSHLGPHLNIVNLLGAC 110 (401)
T ss_pred ecHHHeehhhhccCCCce--eEEEEEEcCCCCCCCceEEEEEecCCCCCh-hHHHHHHHHHHHHHhcCCCCCeEEEEEEE
Confidence 3445688899999998 8 99999964 34568999999764332 33456889999999997 99999999998
Q ss_pred EecccCcCCcccEEEEEecCC--cchHHHHHHhCCC--------------------------------------------
Q 004157 89 EVENIDATSTKITIYIVTEPV--MPLSEKIKELGLE-------------------------------------------- 122 (771)
Q Consensus 89 e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~-------------------------------------------- 122 (771)
... ..+||||||| ++|.++|......
T Consensus 111 ~~~--------~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (401)
T cd05107 111 TKG--------GPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMS 182 (401)
T ss_pred ccC--------CCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccC
Confidence 763 3789999999 6899998754210
Q ss_pred ---------------------------------------------------CCCcHHHHHHHHHHHHHHHHHHHcCCCce
Q 004157 123 ---------------------------------------------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLV 151 (771)
Q Consensus 123 ---------------------------------------------------~~~~~~~i~~gl~QI~~aL~fLH~~~~iv 151 (771)
.......+..++.||+.||.|||+ .+++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~iv 261 (401)
T cd05107 183 KDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLAS-KNCV 261 (401)
T ss_pred CccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc-CCcC
Confidence 000111234458899999999996 8999
Q ss_pred ecCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHH
Q 004157 152 HGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLI 231 (771)
Q Consensus 152 H~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li 231 (771)
||||||+||+++.++.+||+|||+++........ ........+..|++||++.+ ..++.++|+|||||++
T Consensus 262 Hrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwslGvil 331 (401)
T cd05107 262 HRDLAARNVLICEGKLVKICDFGLARDIMRDSNY----ISKGSTFLPLKWMAPESIFN------NLYTTLSDVWSFGILL 331 (401)
T ss_pred cccCCcceEEEeCCCEEEEEecCcceeccccccc----ccCCCcCCCCceeChHHhcC------CCCCcHhHHHHHHHHH
Confidence 9999999999999999999999998765332110 00111123457999999865 3466789999999999
Q ss_pred HHHhh-CCCCCChhhh--------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 232 YELFS-GMRLSKTEEL--------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 232 ~el~~-g~~p~~~~~l--------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
|||++ |..|+..... .....++..+.+++.+|+..+|..||++.++++.
T Consensus 332 ~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~ 395 (401)
T cd05107 332 WEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL 395 (401)
T ss_pred HHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 99998 6766642110 0112356778899999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-27 Score=255.91 Aligned_cols=245 Identities=16% Similarity=0.238 Sum_probs=186.0
Q ss_pred CceecCCCCCCC-CceEEEEeEEC---CCCCcEEEEEEeCCCC--chhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSK---DDGSPVSIFSISGTNA--QDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVEN 92 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k---~~g~~VaIK~~~~~~~--~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~ 92 (771)
.|++.+.||.|+ | .||.+++. .+++.|+||++.+... .....+.+.+|++++++++ ||||+++++.++..
T Consensus 1 ~~~~~~~ig~G~~~--~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~- 77 (288)
T cd05583 1 NFELLRVLGTGAYG--KVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTD- 77 (288)
T ss_pred CceEEEEeccCCCc--eEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecC-
Confidence 488999999998 8 89988864 4678999999975322 1234566789999999995 99999999998763
Q ss_pred cCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEE
Q 004157 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL 170 (771)
..+|+||||+ ++|.+++..... .....+..++.|++.+|.|||+ .+++||||+|.||+++.++.++|
T Consensus 78 -------~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~ql~~~l~~lH~-~~~~H~dl~p~nil~~~~~~~~l 146 (288)
T cd05583 78 -------TKLHLILDYVNGGELFTHLYQREH---FTESEVRVYIAEIVLALDHLHQ-LGIIYRDIKLENILLDSEGHVVL 146 (288)
T ss_pred -------CEEEEEEecCCCCcHHHHHhhcCC---cCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHeEECCCCCEEE
Confidence 4889999999 478888765432 2234455668899999999996 89999999999999999999999
Q ss_pred EccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-----
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----- 245 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----- 245 (771)
+|||++........ .......+...|++||...+.. ...+.++|+||||+++|+|++|..|+....
T Consensus 147 ~dfg~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~----~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~ 217 (288)
T cd05583 147 TDFGLSKEFLAEEE-----ERAYSFCGTIEYMAPEVIRGGS----GGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQ 217 (288)
T ss_pred EECccccccccccc-----cccccccCCccccCHHHhcCCC----CCCcchhhhHHHHHHHHHHHhCCCCcccCcccchH
Confidence 99999876543211 1111223445899999976531 135678999999999999999998874211
Q ss_pred --h-----h----ccCCCCcchHHHHHHHhccCCCCCCC---hHHHhhCCCCCcchh
Q 004157 246 --L-----R----NTASIPKSLLPDYQRLLSSMPSRRLN---SSKLIENSEYFQNKL 288 (771)
Q Consensus 246 --l-----~----~~~~IP~~l~~~i~~lL~~~P~~Rps---~~~lL~~~~fF~n~l 288 (771)
+ . ....++..+.+++.+||+.+|+.||+ +.++++| .||++..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~-~~~~~~~ 273 (288)
T cd05583 218 SEISRRILKSKPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH-PFFQGID 273 (288)
T ss_pred HHHHHHHHccCCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC-cccccCC
Confidence 0 0 01235677899999999999999998 4566877 6777643
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-27 Score=255.79 Aligned_cols=238 Identities=17% Similarity=0.192 Sum_probs=180.9
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCC----cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGS----PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~----~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~ 92 (771)
...|++.+.||.|+ | .||+|+++.+|. .|++|.+..... ......+.+|+.+++.++||||+++++.+...
T Consensus 6 ~~~~~~~~~lg~G~~g--~vy~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~- 81 (303)
T cd05110 6 ETELKRVKVLGSGAFG--TVYKGIWVPEGETVKIPVAIKILNETTG-PKANVEFMDEALIMASMDHPHLVRLLGVCLSP- 81 (303)
T ss_pred hhhceeccccccCCCc--cEEEEEEecCCCcceeeEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-
Confidence 34688899999998 8 899999988876 468888764322 23344678899999999999999999988642
Q ss_pred cCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEE
Q 004157 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL 170 (771)
..++++||+ ++|.+++...... .....+..+++||+.||.|||+ .+++||||||+||+++.++.+||
T Consensus 82 --------~~~~v~e~~~~g~l~~~~~~~~~~--~~~~~~~~~~~qi~~~L~~LH~-~~ivH~dikp~Nill~~~~~~kL 150 (303)
T cd05110 82 --------TIQLVTQLMPHGCLLDYVHEHKDN--IGSQLLLNWCVQIAKGMMYLEE-RRLVHRDLAARNVLVKSPNHVKI 150 (303)
T ss_pred --------CceeeehhcCCCCHHHHHHhcccC--CCHHHHHHHHHHHHHHHHHHhh-cCeeccccccceeeecCCCceEE
Confidence 467999999 5798888764321 2233455668999999999996 89999999999999999999999
Q ss_pred EccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhh---h
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE---L 246 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~---l 246 (771)
+|||+++........ ........+..|++||++.+ ..++.++|+|||||++||+++ |..|+.... .
T Consensus 151 ~Dfg~~~~~~~~~~~----~~~~~~~~~~~y~~PE~~~~------~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~ 220 (303)
T cd05110 151 TDFGLARLLEGDEKE----YNADGGKMPIKWMALECIHY------RKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREI 220 (303)
T ss_pred ccccccccccCcccc----cccCCCccccccCCHHHhcc------CCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 999999876532110 11111223457999999865 356788999999999999997 777764321 1
Q ss_pred h----c------cCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 R----N------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 ~----~------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
. . ....+..+..++.+|+..+|..||++.++++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~ 264 (303)
T cd05110 221 PDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAE 264 (303)
T ss_pred HHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 1 0 12245568888999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.8e-29 Score=265.94 Aligned_cols=237 Identities=20% Similarity=0.337 Sum_probs=186.7
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC------CCCeeEEeeeEEecc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR------HPNILAFLHSTEVEN 92 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr------HPnIlkv~d~~e~e~ 92 (771)
+|.+....|.|- + +|..|.+..-|..||||++.. ++...+.-..|+++|++|. --++|+++..|..
T Consensus 433 RY~V~~~~GkGvFs--~Vvra~D~~r~~~vAiKIIRn---NE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~h-- 505 (752)
T KOG0670|consen 433 RYEVQGYTGKGVFS--TVVRARDQARGQEVAIKIIRN---NEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKH-- 505 (752)
T ss_pred eeEEEeccccceee--eeeeccccCCCCeeEEEEeec---chHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhh--
Confidence 444444445554 5 899999988899999999974 3444566788999999995 2378999988887
Q ss_pred cCcCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCC-CcEEE
Q 004157 93 IDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT-LDWKL 170 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~-G~~KL 170 (771)
++++|+|+|.+ ..|.++|+..+..-......+..+.+|++.||..|.. |+++|+||||+||+||+. ...||
T Consensus 506 ------knHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~-c~vlHaDIKPDNiLVNE~k~iLKL 578 (752)
T KOG0670|consen 506 ------KNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKK-CGVLHADIKPDNILVNESKNILKL 578 (752)
T ss_pred ------cceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHh-cCeeecccCccceEeccCcceeee
Confidence 56999999999 7999999998765444455567779999999999996 999999999999999986 45899
Q ss_pred EccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----h
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----L 246 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----l 246 (771)
||||-+....... + ..+++...|.|||++.| ..|.+.+|+||.||.|||||+|..+|.... +
T Consensus 579 CDfGSA~~~~ene------i--tPYLVSRFYRaPEIiLG------~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~ML 644 (752)
T KOG0670|consen 579 CDFGSASFASENE------I--TPYLVSRFYRAPEIILG------LPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQML 644 (752)
T ss_pred ccCcccccccccc------c--cHHHHHHhccCcceeec------CcccCCccceeeceeeEEeeccceecCCCCcHHHH
Confidence 9999998776532 1 22466678999999998 478889999999999999999987764311 0
Q ss_pred h-------------------------------------------------------------ccCCCCc-------chHH
Q 004157 247 R-------------------------------------------------------------NTASIPK-------SLLP 258 (771)
Q Consensus 247 ~-------------------------------------------------------------~~~~IP~-------~l~~ 258 (771)
+ ....+|. .+.+
T Consensus 645 rl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rd 724 (752)
T KOG0670|consen 645 RLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRD 724 (752)
T ss_pred HHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHH
Confidence 0 0011332 3677
Q ss_pred HHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 259 DYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 259 ~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
++.+||..||.+|.++.++|.| +||.
T Consensus 725 LLdkml~LdP~KRit~nqAL~H-pFi~ 750 (752)
T KOG0670|consen 725 LLDKMLILDPEKRITVNQALKH-PFIT 750 (752)
T ss_pred HHHHHhccChhhcCCHHHHhcC-Cccc
Confidence 7889999999999999999999 6664
|
|
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.9e-27 Score=247.52 Aligned_cols=238 Identities=15% Similarity=0.175 Sum_probs=171.1
Q ss_pred CCCCCC-CceEEEEeEECC--CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEE
Q 004157 26 PYPSAW-GSWSHFQGTSKD--DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITI 102 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~--~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~i 102 (771)
.||.|+ | .||+|+... ++..+++|.+...... .....+.+|+..+++++||||+++++.+... ..+
T Consensus 2 ~lg~G~~g--~Vy~~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--------~~~ 70 (269)
T cd05087 2 EIGNGWFG--KVILGEVNSGYTPAQVVVKELRVSASV-QEQMKFLEEAQPYRSLQHSNLLQCLGQCTEV--------TPY 70 (269)
T ss_pred cccccCCc--eEEEEEEcCCCCceEEEEEecCCCCCh-HHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC--------CCc
Confidence 578887 7 899998653 4567999988754332 2334678899999999999999999988753 368
Q ss_pred EEEecCC--cchHHHHHHhCCC--CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccc
Q 004157 103 YIVTEPV--MPLSEKIKELGLE--GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (771)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~--~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~ 178 (771)
|+||||+ ++|.+++...... .......+...+.|++.||.|||+ .+++|+||||+||+++.++.+||+|||++..
T Consensus 71 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~ 149 (269)
T cd05087 71 LLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHK-NNFIHSDLALRNCLLTADLTVKIGDYGLSHN 149 (269)
T ss_pred EEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH-CCEeccccCcceEEEcCCCcEEECCcccccc
Confidence 9999999 5799988764321 112233445568899999999996 8999999999999999999999999999865
Q ss_pred cCCCCCCCCCCccccccccCCCCCChhccccccc-cccCCCCCcchHHHHHHHHHHHhh-CCCCCChhh---h-----h-
Q 004157 179 FDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWT-AVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE---L-----R- 247 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~-~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~---l-----~- 247 (771)
...... .........+..|+|||++.+... .....++.++|+|||||++|||++ |..||.... . .
T Consensus 150 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~ 225 (269)
T cd05087 150 KYKEDY----YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVRE 225 (269)
T ss_pred ccCcce----eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhc
Confidence 432211 000111223457999999864211 011234678999999999999996 887764211 0 0
Q ss_pred cc---------CCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 NT---------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 ~~---------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.. ...++.+.+++.+|+ .+|.+||++.+++..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~ 266 (269)
T cd05087 226 QQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLL 266 (269)
T ss_pred ccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHH
Confidence 00 123455777888888 689999999998753
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.3e-27 Score=246.99 Aligned_cols=225 Identities=16% Similarity=0.163 Sum_probs=170.8
Q ss_pred CCCCCCC-CceEEEEeEECCCC----------CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDG----------SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g----------~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
+.||.|+ | .||+|+++.++ ..|++|++..... ....+.+|+.+++.++||||+++++++.. .
T Consensus 1 ~~lg~G~~~--~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~- 73 (259)
T cd05037 1 EHLGQGTFT--NIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHR---DSLAFFETASLMSQLSHKHLVKLYGVCVR-D- 73 (259)
T ss_pred Ccccccccc--eEEEEEEeccCCccccCCccceeeeeeccccchh---hHHHHHHHHHHHHcCCCcchhheeeEEec-C-
Confidence 4678887 7 99999998776 3577887764321 15677889999999999999999998875 2
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC-----
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL----- 166 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G----- 166 (771)
..|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.++
T Consensus 74 -------~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~dlkp~Nill~~~~~~~~~ 143 (259)
T cd05037 74 -------ENIMVEEYVKFGPLDVFLHREKN--NVSLHWKLDVAKQLASALHYLED-KKLVHGNVCGKNILVARYGLNEGY 143 (259)
T ss_pred -------CcEEEEEcCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhh-CCeecccCccceEEEecCccccCC
Confidence 469999999 579998877542 12334456668999999999996 9999999999999999888
Q ss_pred --cEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhC-CCCCCh
Q 004157 167 --DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG-MRLSKT 243 (771)
Q Consensus 167 --~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g-~~p~~~ 243 (771)
.+||+|||++....... .......|+|||++.+.- ..++.++|+|||||++|++++| ..++..
T Consensus 144 ~~~~kl~Dfg~a~~~~~~~----------~~~~~~~y~aPE~~~~~~----~~~~~~~Di~slG~~~~~l~~~~~~p~~~ 209 (259)
T cd05037 144 VPFIKLSDPGIPITVLSRE----------ERVERIPWIAPECIRNGQ----ASLTIAADKWSFGTTLLEICSNGEEPLST 209 (259)
T ss_pred ceeEEeCCCCccccccccc----------ccccCCCccChhhhcCCC----CCcchhhHHHHHHHHHHHHHhCCCCCccc
Confidence 79999999987654311 112334799999986521 2466789999999999999985 444432
Q ss_pred hhh-------hcc--CCC--CcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 244 EEL-------RNT--ASI--PKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 244 ~~l-------~~~--~~I--P~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
... ... ... ...+.+++.+||..+|.+||++.++++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 257 (259)
T cd05037 210 LSSSEKERFYQDQHRLPMPDCAELANLINQCWTYDPTKRPSFRAILRD 257 (259)
T ss_pred CCchhHHHHHhcCCCCCCCCchHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 211 001 111 2468899999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.2e-28 Score=242.07 Aligned_cols=236 Identities=15% Similarity=0.146 Sum_probs=183.5
Q ss_pred ecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccCcCCccc
Q 004157 23 IGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDATSTKI 100 (771)
Q Consensus 23 i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d~~~~~~ 100 (771)
+...+|+|+ | +|++++.+++|.-.|||.+.+..+.+ ..+++...+.+.-.-. .|+|++++++|..+ .
T Consensus 96 ~l~dlGsGtcG--~V~k~~~rs~~~iiAVK~M~rt~Nke-e~kRILmDldvv~~s~dcpyIV~c~GyFi~n--------~ 164 (391)
T KOG0983|consen 96 NLGDLGSGTCG--QVWKMRFRSTGHIIAVKQMRRTGNKE-ENKRILMDLDVVLKSHDCPYIVQCFGYFITN--------T 164 (391)
T ss_pred hHHhhcCCCcc--ceEEEEEcccceEEEEEeecccCCHH-HHHHHHHhhhHHhhccCCCeeeeeeeEEeeC--------c
Confidence 445678888 8 99999999999999999998765544 4556666666655544 89999999999874 3
Q ss_pred EEEEEecCCc-chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccccc
Q 004157 101 TIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (771)
Q Consensus 101 ~iyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~ 179 (771)
.++|.||.+. -+..+|++.... ..+..+-.....+++||.||.++.+++||||||+||++++.|++||||||++..+
T Consensus 165 dV~IcMelMs~C~ekLlkrik~p--iPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrl 242 (391)
T KOG0983|consen 165 DVFICMELMSTCAEKLLKRIKGP--IPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRL 242 (391)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCC--chHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeeccccccee
Confidence 6899999984 455555554322 2334455568899999999999899999999999999999999999999999887
Q ss_pred CCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-----h--------
Q 004157 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-----L-------- 246 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-----l-------- 246 (771)
.++.. +....+-..||+||.+.-.- +..|...+|+||||+.++||.+|..|+.... +
T Consensus 243 vdSkA-------htrsAGC~~YMaPERidp~~---~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~eP 312 (391)
T KOG0983|consen 243 VDSKA-------HTRSAGCAAYMAPERIDPPD---KPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEP 312 (391)
T ss_pred ecccc-------cccccCCccccCccccCCCC---CCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCC
Confidence 65321 22223345899999986531 2467789999999999999999998886521 1
Q ss_pred ---hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 247 ---RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 247 ---~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
..-..++..+.+++..||..|+.+||...++|+|+
T Consensus 313 P~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~ 350 (391)
T KOG0983|consen 313 PLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHP 350 (391)
T ss_pred CCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCc
Confidence 11123566788999999999999999999999993
|
|
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.1e-27 Score=250.19 Aligned_cols=248 Identities=10% Similarity=0.041 Sum_probs=180.0
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEECCC---CCcEEEEEEeCCCCchhH---------HHHHHHHHHHHhcCCCCCee
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDD---GSPVSIFSISGTNAQDGH---------LAAARNGVKRLRTVRHPNIL 82 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~---g~~VaIK~~~~~~~~~~~---------~~~~~~ei~~Lk~LrHPnIl 82 (771)
+....|++++.||.|+ | +||+|.++.+ +..+++|+.......-.. ......++..++.+.|+||+
T Consensus 9 i~~~~y~i~~~LG~G~fG--~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~ 86 (294)
T PHA02882 9 ITGKEWKIDKLIGCGGFG--CVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIP 86 (294)
T ss_pred cCCCceEEeeEEecCCCc--eEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCC
Confidence 3456899999999999 9 9999999887 667788875543221100 01122344566778899999
Q ss_pred EEeeeEEecccCcCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEE
Q 004157 83 AFLHSTEVENIDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVV 161 (771)
Q Consensus 83 kv~d~~e~e~~d~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~ 161 (771)
++++........ ....|+++|++ ..+.+.++..... ....+..++.||+.||.|||+ .+++||||||+||+
T Consensus 87 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~qi~~~l~~lH~-~~iiHrDiKp~Nil 158 (294)
T PHA02882 87 KYYGCGSFKRCR----MYYRFILLEKLVENTKEIFKRIKCK---NKKLIKNIMKDMLTTLEYIHE-HGISHGDIKPENIM 158 (294)
T ss_pred cEEEeeeEecCC----ceEEEEEEehhccCHHHHHHhhccC---CHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEE
Confidence 999977654311 23558899988 4566666554211 234466779999999999996 89999999999999
Q ss_pred EcCCCcEEEEccCcccccCCCCCCCCCC-ccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCC
Q 004157 162 VTQTLDWKLHAFDVLSEFDGNNEAANGP-MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL 240 (771)
Q Consensus 162 v~~~G~~KL~dFgla~~~~~~~~~~~~~-~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p 240 (771)
++.++.+||+|||+++.+.......... .......++..|+|||+..+ ..++.++|+|||||++|||++|..|
T Consensus 159 l~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~------~~~~~~~DiwSlG~~l~el~~g~~P 232 (294)
T PHA02882 159 VDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNG------ACVTRRGDLESLGYCMLKWAGIKLP 232 (294)
T ss_pred EcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCC------CCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999999998764322111000 00111234558999999876 3577899999999999999999999
Q ss_pred CChhh-------------hh-------ccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 241 SKTEE-------------LR-------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 241 ~~~~~-------------l~-------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
|.... .. .+...|+.+.++++.|+..+|.+||+..++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 233 WKGFGHNGNLIHAAKCDFIKRLHEGKIKIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred CCccccchHHHHHhHHHHHHHhhhhhhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 85321 01 13466888999999999999999999999875
|
|
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.8e-27 Score=249.00 Aligned_cols=225 Identities=17% Similarity=0.147 Sum_probs=166.6
Q ss_pred CCCCCC-CceEEEEeEECCC------------------------CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCC
Q 004157 26 PYPSAW-GSWSHFQGTSKDD------------------------GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPN 80 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~~------------------------g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPn 80 (771)
.||+|+ | .||+|+...+ ...|+||+++... ......+.+|+.+++.++|||
T Consensus 2 ~lG~G~~~--~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~~~~l~h~n 77 (274)
T cd05076 2 HLGQGTRT--NIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH--RDIALAFFETASLMSQVSHIH 77 (274)
T ss_pred CcCccccc--ceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH--HHHHHHHHHHHHHHhcCCCCC
Confidence 578887 8 8999885322 2358888886432 223456778899999999999
Q ss_pred eeEEeeeEEecccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCC
Q 004157 81 ILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLS 158 (771)
Q Consensus 81 Ilkv~d~~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~ 158 (771)
|+++++++... ...|+||||+ ++|..++..... .........++.||+.||.|||+ .+++||||||+
T Consensus 78 iv~~~~~~~~~--------~~~~lv~ey~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~-~~iiH~dlkp~ 146 (274)
T cd05076 78 LAFVHGVCVRG--------SENIMVEEFVEHGPLDVCLRKEKG--RVPVAWKITVAQQLASALSYLED-KNLVHGNVCAK 146 (274)
T ss_pred eeeEEEEEEeC--------CceEEEEecCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHc-CCccCCCCCcc
Confidence 99999998763 3789999999 578888765321 12234455679999999999996 89999999999
Q ss_pred CEEEcCCC-------cEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHH
Q 004157 159 SVVVTQTL-------DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLI 231 (771)
Q Consensus 159 NI~v~~~G-------~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li 231 (771)
||+++..| .+||+|||++....... ....+..|+|||.+.+. ..++.++|+|||||++
T Consensus 147 Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~~----------~~~~~~~~~aPe~~~~~-----~~~~~~~Dv~slG~~l 211 (274)
T cd05076 147 NILLARLGLAEGTSPFIKLSDPGVSFTALSRE----------ERVERIPWIAPECVPGG-----NSLSTAADKWSFGTTL 211 (274)
T ss_pred cEEEeccCcccCccceeeecCCcccccccccc----------ccccCCcccCchhhcCC-----CCCCcHHHHHHHHHHH
Confidence 99998654 38999999875443211 11234579999987653 3466789999999999
Q ss_pred HHHh-hCCCCCChhhh-------hc----cCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 232 YELF-SGMRLSKTEEL-------RN----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 232 ~el~-~g~~p~~~~~l-------~~----~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
||++ .|..|+..... .. ....+..+.+++.+||+.+|.+||++.+++++
T Consensus 212 ~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 212 LEICFDGEVPLKERTPSEKERFYEKKHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred HHHHhCCCCCccccChHHHHHHHHhccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 9985 67776643211 11 12233568899999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.95 E-value=5e-27 Score=243.99 Aligned_cols=214 Identities=14% Similarity=0.159 Sum_probs=166.9
Q ss_pred EEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEEEEecCC--cch
Q 004157 35 SHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPV--MPL 112 (771)
Q Consensus 35 tVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iyIVtE~v--~~L 112 (771)
+||.+.++.+|+.|++|.+.+.. ...+|...+....||||+++++++... ..+|+||||+ ++|
T Consensus 8 ~v~~~~~~~~~~~~~~K~i~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~~--------~~~~lv~e~~~~~~L 72 (237)
T cd05576 8 KVLLVMDTRTQQTFILKGLRKSS-------EYSRERLTIIPHCVPNMVCLHKYIVSE--------DSVFLVLQHAEGGKL 72 (237)
T ss_pred eEEEEEEccCCcEEEEEeecchh-------hhhhHHHHHHhcCCCceeehhhheecC--------CeEEEEEecCCCCCH
Confidence 89999999999999999997542 123345555666799999999998863 4899999999 579
Q ss_pred HHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccc
Q 004157 113 SEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQ 192 (771)
Q Consensus 113 ~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~ 192 (771)
.+++..... .....+..++.|++.||.|||+ .+++||||||+||+++.+|..+|+|||.+.......
T Consensus 73 ~~~l~~~~~---l~~~~~~~~~~ql~~~l~~lH~-~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~--------- 139 (237)
T cd05576 73 WSHISKFLN---IPEECVKRWAAEMVVALDALHR-EGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC--------- 139 (237)
T ss_pred HHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHEEEcCCCCEEEecccchhcccccc---------
Confidence 888876532 2344566779999999999996 899999999999999999999999999876654311
Q ss_pred cccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh--------hccCCCCcchHHHHHHHh
Q 004157 193 YAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--------RNTASIPKSLLPDYQRLL 264 (771)
Q Consensus 193 ~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l--------~~~~~IP~~l~~~i~~lL 264 (771)
........|++||...+ ..++.++|+|||||++||+++|..++..... .....++..+.+++.+||
T Consensus 140 ~~~~~~~~y~aPE~~~~------~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 213 (237)
T cd05576 140 DGEAVENMYCAPEVGGI------SEETEACDWWSLGAILFELLTGKTLVECHPSGINTHTTLNIPEWVSEEARSLLQQLL 213 (237)
T ss_pred ccCCcCccccCCcccCC------CCCCchhhHHHHHHHHHHHHHCcchhhcCchhcccccccCCcccCCHHHHHHHHHHc
Confidence 11122346999998765 3456789999999999999999876542211 111345667888999999
Q ss_pred ccCCCCCCCh-----HHHhhCCC
Q 004157 265 SSMPSRRLNS-----SKLIENSE 282 (771)
Q Consensus 265 ~~~P~~Rps~-----~~lL~~~~ 282 (771)
+.+|.+|+++ .++++|++
T Consensus 214 ~~dp~~R~~~~~~~~~~~~~h~~ 236 (237)
T cd05576 214 QFNPTERLGAGVAGVEDIKSHPF 236 (237)
T ss_pred cCCHHHhcCCCccchHHHHcCCC
Confidence 9999999985 88898844
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.4e-28 Score=255.23 Aligned_cols=239 Identities=20% Similarity=0.235 Sum_probs=189.9
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC--CC----CeeEEeeeEE
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR--HP----NILAFLHSTE 89 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr--HP----nIlkv~d~~e 89 (771)
...+|+|.+.+|+|+ | .|-++.++.++..||||++. +-+...+.++-|++.|.+|. -| -++++.++|+
T Consensus 87 l~~Ry~i~~~lGeGtFG--kV~ec~D~~~~~~vAlKIik---~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFd 161 (415)
T KOG0671|consen 87 LTNRYEIVDLLGEGTFG--KVVECWDRETKEHVALKIIK---NVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFD 161 (415)
T ss_pred cccceehhhhhcCCccc--ceEEEeecCCCceehHHHHH---HHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhh
Confidence 367899999999999 9 99999999999999999986 23456778889999999994 23 2777878888
Q ss_pred ecccCcCCcccEEEEEecCCc-chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC----
Q 004157 90 VENIDATSTKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ---- 164 (771)
Q Consensus 90 ~e~~d~~~~~~~iyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~---- 164 (771)
. ..++|||+|.++ ++.++|++++..... ...|..+.+||+++++|||+ .+++|-||||+||++..
T Consensus 162 y--------rghiCivfellG~S~~dFlk~N~y~~fp-i~~ir~m~~QL~~sv~fLh~-~kl~HTDLKPENILfvss~~~ 231 (415)
T KOG0671|consen 162 Y--------RGHICIVFELLGLSTFDFLKENNYIPFP-IDHIRHMGYQLLESVAFLHD-LKLTHTDLKPENILFVSSEYF 231 (415)
T ss_pred c--------cCceEEEEeccChhHHHHhccCCccccc-hHHHHHHHHHHHHHHHHHHh-cceeecCCChheEEEeccceE
Confidence 7 349999999998 899999997754433 34467779999999999995 99999999999999832
Q ss_pred ----------------CCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHH
Q 004157 165 ----------------TLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLG 228 (771)
Q Consensus 165 ----------------~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG 228 (771)
+-.+||+|||-++...+. .+.-+.+..|+|||++.+ -+++..+|+||+|
T Consensus 232 ~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~---------hs~iVsTRHYRAPEViLg------LGwS~pCDvWSiG 296 (415)
T KOG0671|consen 232 KTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEH---------HSTIVSTRHYRAPEVILG------LGWSQPCDVWSIG 296 (415)
T ss_pred EEeccCCccceeccCCCcceEEEecCCcceeccC---------cceeeeccccCCchheec------cCcCCccCceeee
Confidence 244899999998765542 122244569999999987 4677899999999
Q ss_pred HHHHHHhhCCCCCChhh----h--h--ccCCC------------------------------------C-----------
Q 004157 229 CLIYELFSGMRLSKTEE----L--R--NTASI------------------------------------P----------- 253 (771)
Q Consensus 229 ~li~el~~g~~p~~~~~----l--~--~~~~I------------------------------------P----------- 253 (771)
|+++|+++|..+|++.+ + . .++++ |
T Consensus 297 CIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d 376 (415)
T KOG0671|consen 297 CILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDD 376 (415)
T ss_pred eEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCc
Confidence 99999999998886432 1 0 00011 1
Q ss_pred ---cchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 254 ---KSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 254 ---~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
..|.+++++||..||.+|+|+.++|.| +||..
T Consensus 377 ~e~~~LfDLl~~mL~fDP~~RiTl~EAL~H-pFF~~ 411 (415)
T KOG0671|consen 377 LEHVQLFDLLRRMLEFDPARRITLREALSH-PFFAR 411 (415)
T ss_pred HHHhHHHHHHHHHHccCccccccHHHHhcC-HHhhc
Confidence 137888999999999999999999998 67753
|
|
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-26 Score=243.54 Aligned_cols=238 Identities=15% Similarity=0.178 Sum_probs=168.7
Q ss_pred CCCCCC-CceEEEEeEECCCC--CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEE
Q 004157 26 PYPSAW-GSWSHFQGTSKDDG--SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITI 102 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~~g--~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~i 102 (771)
+||.|+ | +||+|....++ ..+++|.+..... ....+.+.+|+..++.++||||+++++.+... ..+
T Consensus 2 ~lg~G~~g--~v~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~--------~~~ 70 (268)
T cd05086 2 EIGNGWFG--KVLLSEIYTDTGVARVVVKELKANAS-SKEQNEFLQQGDPYRILQHPNILQCLGQCVEA--------IPY 70 (268)
T ss_pred cCCCCcCc--eEEEEEEEcCCCcceEEEEEecCCCC-hHHHHHHHHHHHHHhccCCcchhheEEEecCC--------Ccc
Confidence 578888 8 89999754333 3466777654322 23456788999999999999999999998753 378
Q ss_pred EEEecCC--cchHHHHHHhCC-CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccccc
Q 004157 103 YIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (771)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~ 179 (771)
|+||||+ ++|.+++.+... ........+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++...
T Consensus 71 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~-~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~ 149 (268)
T cd05086 71 LLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHK-HNFLHSDLALRNCFLTSDLTVKVGDYGIGPSR 149 (268)
T ss_pred EEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH-CCeeccCCccceEEEcCCccEEeccccccccc
Confidence 9999999 589999876432 1222334456679999999999996 89999999999999999999999999987543
Q ss_pred CCCCCCCCCCccccccccCCCCCChhcccccccc-ccCCCCCcchHHHHHHHHHHHhhC-CCCCChhh----hh----c-
Q 004157 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTA-VRKSPPWSIDSWGLGCLIYELFSG-MRLSKTEE----LR----N- 248 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~-~~~~~~~~~Di~SLG~li~el~~g-~~p~~~~~----l~----~- 248 (771)
....... .......+..|+|||+....... ....++.++|+|||||++|||+++ ..|+.... +. .
T Consensus 150 ~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~ 225 (268)
T cd05086 150 YKEDYIE----TEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQ 225 (268)
T ss_pred Ccchhhh----cccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhc
Confidence 2211000 01112334589999997542211 112456789999999999999964 45553211 10 0
Q ss_pred ---------cCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 249 ---------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 249 ---------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
...++..+..++.+|+ .+|.+||++.++++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~ 265 (268)
T cd05086 226 QVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRL 265 (268)
T ss_pred ccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHH
Confidence 0123445677788888 679999999998753
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.6e-28 Score=246.87 Aligned_cols=245 Identities=16% Similarity=0.208 Sum_probs=194.6
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
-..|+..+.+|.|+ | +|..++-|.+++.+|||++.+...-. .....-..|-+.|+..+||.+..+-..|.+.
T Consensus 167 m~dFdfLKvLGkGTFG--KVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~---- 240 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFG--KVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQ---- 240 (516)
T ss_pred cchhhHHHHhcCCccc--eEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccC----
Confidence 35688889999999 9 99999999999999999998753221 2233345688999999999998888888863
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
.++|+||||+ +.|..+|.+.....+.+. .++-..|+.||.|||+ .+||.||||.+|.+++.+|.+||.||
T Consensus 241 ----drlCFVMeyanGGeLf~HLsrer~FsE~Rt---RFYGaEIvsAL~YLHs-~~ivYRDlKLENLlLDkDGHIKitDF 312 (516)
T KOG0690|consen 241 ----DRLCFVMEYANGGELFFHLSRERVFSEDRT---RFYGAEIVSALGYLHS-RNIVYRDLKLENLLLDKDGHIKITDF 312 (516)
T ss_pred ----ceEEEEEEEccCceEeeehhhhhcccchhh---hhhhHHHHHHhhhhhh-CCeeeeechhhhheeccCCceEeeec
Confidence 4999999999 568888877554333333 3337799999999997 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh--------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-------- 245 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-------- 245 (771)
|+|..-...+. ....+++++.|.|||++.. ..|+.++|.|++|++||||++|+.||...+
T Consensus 313 GLCKE~I~~g~------t~kTFCGTPEYLAPEVleD------nDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLI 380 (516)
T KOG0690|consen 313 GLCKEEIKYGD------TTKTFCGTPEYLAPEVLED------NDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELI 380 (516)
T ss_pred ccchhcccccc------eeccccCChhhcCchhhcc------ccccceeehhhhhHHHHHHHhccCcccccchhHHHHHH
Confidence 99986443211 1334667779999999987 478899999999999999999998875433
Q ss_pred ----hhccCCCCcchHHHHHHHhccCCCCCCC-----hHHHhhCCCCCcchhh
Q 004157 246 ----LRNTASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENSEYFQNKLV 289 (771)
Q Consensus 246 ----l~~~~~IP~~l~~~i~~lL~~~P~~Rps-----~~~lL~~~~fF~n~lv 289 (771)
++....+.++...++..||..+|++|.. +.++.+| .||.+.-.
T Consensus 381 l~ed~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h-~FF~~v~W 432 (516)
T KOG0690|consen 381 LMEDLKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRH-RFFASVDW 432 (516)
T ss_pred HhhhccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhh-hhhccCCH
Confidence 3344667778888899999999999984 5566666 77765433
|
|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-27 Score=278.08 Aligned_cols=256 Identities=16% Similarity=0.153 Sum_probs=205.2
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
....|+|.+.||.|. | .|+.++++.+++-||+|++++-..- ......++.|-.+|---..+-|++++..|.++
T Consensus 73 ~~~DfeilKvIGrGaFG--EV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~--- 147 (1317)
T KOG0612|consen 73 KAEDFEILKVIGRGAFG--EVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDE--- 147 (1317)
T ss_pred CHHhhHHHHHhcccccc--eeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCc---
Confidence 456799999999999 9 9999999999999999999862111 12234577787888888889999999999875
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
.++|+||||+ |+|-.+|.+.. ...+.+..+++..|+.||.-||+ .|+|||||||+||+++..|.+||+|
T Consensus 148 -----~~LYlVMdY~pGGDlltLlSk~~---~~pE~~ArFY~aEiVlAldslH~-mgyVHRDiKPDNvLld~~GHikLAD 218 (1317)
T KOG0612|consen 148 -----RYLYLVMDYMPGGDLLTLLSKFD---RLPEDWARFYTAEIVLALDSLHS-MGYVHRDIKPDNVLLDKSGHIKLAD 218 (1317)
T ss_pred -----cceEEEEecccCchHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHh-ccceeccCCcceeEecccCcEeecc
Confidence 4999999999 67988888875 23466778889999999999996 9999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhcc---
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT--- 249 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~~--- 249 (771)
||-|-.+..++ .+.....++++.|.+||++..--. -+..|+..+|.||+|+++|||+.|..||..+.+-.+
T Consensus 219 FGsClkm~~dG-----~V~s~~aVGTPDYISPEvLqs~~~-~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~K 292 (1317)
T KOG0612|consen 219 FGSCLKMDADG-----TVRSSVAVGTPDYISPEVLQSQGD-GKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGK 292 (1317)
T ss_pred chhHHhcCCCC-----cEEeccccCCCCccCHHHHHhhcC-CccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHH
Confidence 99998887533 344455677789999999864211 135688999999999999999999999976654211
Q ss_pred -------------CCCCcchHHHHHHHhccCCCCCCC---hHHHhhCCCCCcchhhhhhhh
Q 004157 250 -------------ASIPKSLLPDYQRLLSSMPSRRLN---SSKLIENSEYFQNKLVDTIHF 294 (771)
Q Consensus 250 -------------~~IP~~l~~~i~~lL~~~P~~Rps---~~~lL~~~~fF~n~lv~~~~~ 294 (771)
..|+....++|+++|. +|..|.. +++|-.| +||.+.-+..++.
T Consensus 293 Im~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~H-pFF~g~~W~~iR~ 351 (1317)
T KOG0612|consen 293 IMNHKESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNH-PFFEGIDWDNIRE 351 (1317)
T ss_pred HhchhhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhC-ccccCCChhhhhh
Confidence 2356778888888876 5677777 9998887 7887765555443
|
|
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-26 Score=274.28 Aligned_cols=145 Identities=14% Similarity=0.239 Sum_probs=124.0
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
..|++.++||.|. | +||+|.++.+++.|+||++..... .......+.+|+..++.++||||+++++++...
T Consensus 4 ~~y~i~~~LG~G~fg--~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~----- 76 (669)
T cd05610 4 EEFVIVKPISRGAFG--KVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSA----- 76 (669)
T ss_pred CCEEEEEEEecCCCe--EEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEEC-----
Confidence 3699999999998 8 999999999999999999976432 234456788999999999999999999998763
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
.++||||||+ ++|.+++...... ....++.++.||+.||.|||. ++|+||||||+|||++.+|.+||+|||
T Consensus 77 ---~~~~lVmEy~~g~~L~~li~~~~~l---~~~~~~~i~~qil~aL~yLH~-~gIiHrDLKP~NILl~~~g~vkL~DFG 149 (669)
T cd05610 77 ---NNVYLVMEYLIGGDVKSLLHIYGYF---DEEMAVKYISEVALALDYLHR-HGIIHRDLKPDNMLISNEGHIKLTDFG 149 (669)
T ss_pred ---CEEEEEEeCCCCCCHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHh-CCEEeCCccHHHEEEcCCCCEEEEeCC
Confidence 4899999999 4799888765432 234456679999999999996 899999999999999999999999999
Q ss_pred ccc
Q 004157 175 VLS 177 (771)
Q Consensus 175 la~ 177 (771)
+++
T Consensus 150 ls~ 152 (669)
T cd05610 150 LSK 152 (669)
T ss_pred CCc
Confidence 875
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.3e-27 Score=269.13 Aligned_cols=234 Identities=17% Similarity=0.218 Sum_probs=188.1
Q ss_pred CceecCCCCCCC-CceEEEEeEECCC-----CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDD-----GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~-----g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
.-++.+++|+|. | +||+|..-.- ..-|+||.++.. ..+.....|++|+..|..|+|||||++++++...
T Consensus 487 ~i~~~~eLGegaFG--kVf~a~~~~l~p~~~~~lVAVK~LKd~-a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~-- 561 (774)
T KOG1026|consen 487 DIVFKEELGEGAFG--KVFLAEAYGLLPGQDEQLVAVKALKDK-AENQARQDFRREAELLAELQHPNIVRLLGVCREG-- 561 (774)
T ss_pred heeehhhhcCchhh--hhhhhhccCCCCCccceehhHhhhccc-ccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccC--
Confidence 455667899999 9 9999986532 357999998754 3444677899999999999999999999999863
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCC-------CC----CcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCE
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLE-------GS----QRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSV 160 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~-------~~----~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI 160 (771)
+-+|+|+||| ++|.++|+..... .. .....+..+..||+.|+.||-+ ..+|||||-..|+
T Consensus 562 ------~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~-~~FVHRDLATRNC 634 (774)
T KOG1026|consen 562 ------DPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSS-HHFVHRDLATRNC 634 (774)
T ss_pred ------CeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-Ccccccchhhhhc
Confidence 4789999999 8999999876421 11 2233456779999999999997 8999999999999
Q ss_pred EEcCCCcEEEEccCcccccCCCCCCCCCCcccc--ccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhC-
Q 004157 161 VVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQY--AWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG- 237 (771)
Q Consensus 161 ~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~--~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g- 237 (771)
+|+++-.+||+|||+++..-+.+ |++. ....+.+|||||.+.. ..++.++||||+|+++||+|+-
T Consensus 635 LVge~l~VKIsDfGLsRdiYssD------YYk~~~~t~lPIRWMppEsIly------~kFTteSDVWs~GVvLWEIFsyG 702 (774)
T KOG1026|consen 635 LVGENLVVKISDFGLSRDIYSSD------YYKVRGNTLLPIRWMPPESILY------GKFTTESDVWSFGVVLWEIFSYG 702 (774)
T ss_pred eeccceEEEecccccchhhhhhh------hhcccCCceeeeecCCHHHhhc------Ccccchhhhhhhhhhhhhhhccc
Confidence 99999999999999999876532 2211 2344569999999986 3788899999999999999984
Q ss_pred CCCCCh---h----------hhhccCCCCcchHHHHHHHhccCCCCCCChHHH
Q 004157 238 MRLSKT---E----------ELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKL 277 (771)
Q Consensus 238 ~~p~~~---~----------~l~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~l 277 (771)
..|+.. + -+....+.|.++..++..|++.+|++||++.++
T Consensus 703 ~QPy~glSn~EVIe~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI 755 (774)
T KOG1026|consen 703 KQPYYGLSNQEVIECIRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEI 755 (774)
T ss_pred cCcccccchHHHHHHHHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHH
Confidence 444321 1 123346789999999999999999999999987
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-27 Score=243.83 Aligned_cols=244 Identities=20% Similarity=0.282 Sum_probs=190.9
Q ss_pred CCCceecCCCCCCCCceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 18 DLPYNIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
..+|.-...++.|.. .|-.+-+.-.+++|+||+......+....+.+.+|++.++.+.|+||++.+.+|.-... ..
T Consensus 16 ~~Ry~nL~p~~~g~~--~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~--l~ 91 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ--IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKT--LE 91 (369)
T ss_pred eeeeeeecccCCCCc--eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCcccc--HH
Confidence 356777778888765 57777777789999999998776555667788999999999999999999999852110 01
Q ss_pred cccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
.-...|+|||++ .+|...+... ...+.++++++|++.|+++||+ .+|+||||||+||+|+.++..|+.|||++
T Consensus 92 ~~~e~y~v~e~m~~nl~~vi~~e-----lDH~tis~i~yq~~~~ik~lhs-~~IihRdLkPsnivv~~~~~lKi~dfg~a 165 (369)
T KOG0665|consen 92 EFQEVYLVMELMDANLCQVILME-----LDHETISYILYQMLCGIKHLHS-AGIIHRDLKPSNIVVNSDCTLKILDFGLA 165 (369)
T ss_pred HHHhHHHHHHhhhhHHHHHHHHh-----cchHHHHHHHHHHHHHHHHHHh-cceeecccCcccceecchhheeeccchhh
Confidence 134689999999 6888887732 1234577889999999999997 99999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL---------- 246 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l---------- 246 (771)
+..... +....+++...|.|||++.+ ..+...+||||+||++.||++|.-+|.+.+.
T Consensus 166 r~e~~~-------~~mtpyVvtRyyrapevil~------~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~ 232 (369)
T KOG0665|consen 166 RTEDTD-------FMMTPYVVTRYYRAPEVILG------MGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQ 232 (369)
T ss_pred cccCcc-------cccCchhheeeccCchheec------cCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHH
Confidence 865442 23445577778999999987 4578899999999999999999877653210
Q ss_pred -h-------------------cc---------CCCC---------------cchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 247 -R-------------------NT---------ASIP---------------KSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 247 -~-------------------~~---------~~IP---------------~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
. +. ..+| ....+++.+||-.+|++|.++.++|+| +
T Consensus 233 lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H-P 311 (369)
T KOG0665|consen 233 LGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH-P 311 (369)
T ss_pred hcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC-C
Confidence 0 00 0111 125677889999999999999999999 5
Q ss_pred CCc
Q 004157 283 YFQ 285 (771)
Q Consensus 283 fF~ 285 (771)
||+
T Consensus 312 Y~~ 314 (369)
T KOG0665|consen 312 YIK 314 (369)
T ss_pred eee
Confidence 664
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-26 Score=269.09 Aligned_cols=274 Identities=11% Similarity=0.108 Sum_probs=176.3
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCC----CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDD----GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~----g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~ 92 (771)
...|++++.||.|+ | +||+|++..+ +..|+||++......+ ...++ .++...+.++..++..+....
T Consensus 131 ~~~y~l~~~LG~G~FG--~VYka~~~~~~~~~~~~vAvK~~~~~~~~e----~~~~e--~l~~~~~~~~~~~~~~~~~~~ 202 (566)
T PLN03225 131 KDDFVLGKKLGEGAFG--VVYKASLVNKQSKKEGKYVLKKATEYGAVE----IWMNE--RVRRACPNSCADFVYGFLEPV 202 (566)
T ss_pred cCCeEEeEEEeeCCCe--EEEEEEEcCCccccCcEEEEEEecccchhH----HHHHH--HHHhhchhhHHHHHHhhhccc
Confidence 34799999999998 8 9999999988 9999999976432111 11111 222223333333333322111
Q ss_pred cCcCCcccEEEEEecCC--cchHHHHHHhCCCC-----------------CCcHHHHHHHHHHHHHHHHHHHcCCCceec
Q 004157 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEG-----------------SQRDEYYAWGLNQIAKAVSFLNNDCKLVHG 153 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~-----------------~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~ 153 (771)
. ......+|||+||+ ++|.+++....... ......+..++.||+.||.|||+ .+|+||
T Consensus 203 ~--~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~-~gIiHR 279 (566)
T PLN03225 203 S--SKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHS-TGIVHR 279 (566)
T ss_pred c--cccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHH-CCEEeC
Confidence 0 00134799999999 46888887543210 01123356679999999999996 899999
Q ss_pred CCCCCCEEEcC-CCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccc----------------cC
Q 004157 154 NVCLSSVVVTQ-TLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAV----------------RK 216 (771)
Q Consensus 154 dIkp~NI~v~~-~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~----------------~~ 216 (771)
||||+||+++. ++.+||+|||++..+.... .+....+.....|+|||.+....... ..
T Consensus 280 DLKP~NILl~~~~~~~KL~DFGlA~~l~~~~-----~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~ 354 (566)
T PLN03225 280 DVKPQNIIFSEGSGSFKIIDLGAAADLRVGI-----NYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQL 354 (566)
T ss_pred cCCHHHEEEeCCCCcEEEEeCCCcccccccc-----ccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccc
Confidence 99999999986 6899999999997654321 11122334556899999654221100 01
Q ss_pred CCCCcchHHHHHHHHHHHhhCCCCCChhhh------hc----------c--CC--------------CCcchHHHHHHHh
Q 004157 217 SPPWSIDSWGLGCLIYELFSGMRLSKTEEL------RN----------T--AS--------------IPKSLLPDYQRLL 264 (771)
Q Consensus 217 ~~~~~~Di~SLG~li~el~~g~~p~~~~~l------~~----------~--~~--------------IP~~l~~~i~~lL 264 (771)
.++.++|||||||++|||+++..++..... .. . .. ......+++.+||
T Consensus 355 ~~~~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL 434 (566)
T PLN03225 355 NLPDRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMM 434 (566)
T ss_pred cCCCCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHc
Confidence 234567999999999999987544332110 00 0 00 1112347999999
Q ss_pred ccCCCCCCChHHHhhCCCCCcchhhhhhhhhhhhccCChhhHHh
Q 004157 265 SSMPSRRLNSSKLIENSEYFQNKLVDTIHFMEILNLKDSVEKDT 308 (771)
Q Consensus 265 ~~~P~~Rps~~~lL~~~~fF~n~lv~~~~~L~~l~~k~~~eK~~ 308 (771)
+.||.+||++.++|+| +||+......+..++.+......+..+
T Consensus 435 ~~dP~kR~ta~e~L~H-pff~~~~~~~~~~~~~~~~~~~~~~~~ 477 (566)
T PLN03225 435 RFKGRQRISAKAALAH-PYFDREGLLGLSVMQNLRLQLFRATQQ 477 (566)
T ss_pred cCCcccCCCHHHHhCC-cCcCCCCccccccccccccccchhhHH
Confidence 9999999999999998 777765544455555554444443333
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-26 Score=252.86 Aligned_cols=233 Identities=20% Similarity=0.262 Sum_probs=171.6
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~ 99 (771)
|.-...||.|+ | +||+|.-. +|..||||.+....... ...+.+|+.+|.+++|||++++++++.+.+
T Consensus 77 Fs~~~~ig~Ggfg--~VYkG~l~-~~~~vAVK~~~~~~~~~--~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~------- 144 (361)
T KOG1187|consen 77 FSESNLIGEGGFG--TVYKGVLS-DGTVVAVKRLSSNSGQG--EREFLNEVEILSRLRHPNLVKLLGYCLEGG------- 144 (361)
T ss_pred CchhcceecCCCe--EEEEEEEC-CCCEEEEEEecCCCCcc--hhHHHHHHHHHhcCCCcCcccEEEEEecCC-------
Confidence 44445788887 7 99999976 55999999887644331 334999999999999999999999998642
Q ss_pred cEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCC--ceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 100 ITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCK--LVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 100 ~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~--ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
...+||+||+ ++|.++|...... ...-..-..++.++++||.|||+.+. |||||||++|||++++.+.||+|||+
T Consensus 145 ~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGL 223 (361)
T KOG1187|consen 145 EHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGL 223 (361)
T ss_pred ceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccC
Confidence 1589999999 6899999775421 11122223448899999999998774 99999999999999999999999999
Q ss_pred ccccCC-CCCCCCCCcccccc-ccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh------h-
Q 004157 176 LSEFDG-NNEAANGPMLQYAW-LVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE------L- 246 (771)
Q Consensus 176 a~~~~~-~~~~~~~~~~~~~~-~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~------l- 246 (771)
+..... ... . ... .++..|++||+...+ ..+.++|+||||+++.|+++|+.+.+... +
T Consensus 224 a~~~~~~~~~-----~--~~~~~gt~gY~~PEy~~~g------~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~ 290 (361)
T KOG1187|consen 224 AKLGPEGDTS-----V--STTVMGTFGYLAPEYASTG------KLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLV 290 (361)
T ss_pred cccCCccccc-----e--eeecCCCCccCChhhhccC------CcCcccccccchHHHHHHHhCCcccCCCCCcccccHH
Confidence 954432 110 0 011 334589999998763 56679999999999999999986543210 0
Q ss_pred ------------hc-----c--CCCC--cc---hHHHHHHHhccCCCCCCChHHHhh
Q 004157 247 ------------RN-----T--ASIP--KS---LLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 247 ------------~~-----~--~~IP--~~---l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.. + ...+ +. +..+..+|++.+|..||+..++++
T Consensus 291 ~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~ 347 (361)
T KOG1187|consen 291 EWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK 347 (361)
T ss_pred HHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence 00 0 1223 12 233346899999999999888654
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.3e-27 Score=260.18 Aligned_cols=233 Identities=19% Similarity=0.222 Sum_probs=183.3
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccCcC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d~~ 96 (771)
-.|++...+|.|+ + .+..+.++.+++..++|++.+...+ ..+|+.++... .||||+++++.+++
T Consensus 322 ~~y~~~~~~~~gs~s--~~~~~~~~~t~~~~~vkii~~~~~~------~~~e~~~~~~~~~h~niv~~~~v~~~------ 387 (612)
T KOG0603|consen 322 ESYEFREELGEGSFS--AVKYCESSPTDQEPAVKIISKRADD------NQDEIPISLLVRDHPNIVKSHDVYED------ 387 (612)
T ss_pred hhhccccccCCCCcc--ceeeeeccccccchhheeccccccc------cccccchhhhhcCCCcceeecceecC------
Confidence 3589999999987 7 8899999999999999999876222 23466555554 59999999999986
Q ss_pred CcccEEEEEecCC-c-chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEE-cCCCcEEEEcc
Q 004157 97 STKITIYIVTEPV-M-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV-TQTLDWKLHAF 173 (771)
Q Consensus 97 ~~~~~iyIVtE~v-~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v-~~~G~~KL~dF 173 (771)
+.++|+|||.+ + -|.+.+....... . ....++.||+.|+.|||. .|+|||||||+||++ +..|.++|+||
T Consensus 388 --~~~~~~v~e~l~g~ell~ri~~~~~~~---~-e~~~w~~~lv~Av~~LH~-~gvvhRDLkp~NIL~~~~~g~lrltyF 460 (612)
T KOG0603|consen 388 --GKEIYLVMELLDGGELLRRIRSKPEFC---S-EASQWAAELVSAVDYLHE-QGVVHRDLKPGNILLDGSAGHLRLTYF 460 (612)
T ss_pred --CceeeeeehhccccHHHHHHHhcchhH---H-HHHHHHHHHHHHHHHHHh-cCeeecCCChhheeecCCCCcEEEEEe
Confidence 45999999999 3 3555554443322 1 133349999999999997 999999999999999 69999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh----hhhcc
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----ELRNT 249 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~----~l~~~ 249 (771)
|+++..... ......+..|.|||+... ..++.++|+||||+++|+|++|..|+... ++...
T Consensus 461 G~a~~~~~~---------~~tp~~t~~y~APEvl~~------~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~ 525 (612)
T KOG0603|consen 461 GFWSELERS---------CDTPALTLQYVAPEVLAI------QEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTR 525 (612)
T ss_pred chhhhCchh---------hcccchhhcccChhhhcc------CCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHh
Confidence 999887652 011133458999999884 58899999999999999999999988542 22211
Q ss_pred -------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcch
Q 004157 250 -------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNK 287 (771)
Q Consensus 250 -------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n~ 287 (771)
..|+....+++++||+.+|.+|+++.+++.|.|+.+++
T Consensus 526 i~~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~~~~~ 570 (612)
T KOG0603|consen 526 IQMPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWFLSHP 570 (612)
T ss_pred hcCCccccccCHHHHHHHHHhccCChhhCcChhhhccCcchhcCC
Confidence 45778899999999999999999999999995553443
|
|
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-26 Score=252.94 Aligned_cols=231 Identities=16% Similarity=0.222 Sum_probs=185.0
Q ss_pred ecCCCCCCC-CceEEEEeEECCC----CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 23 IGDPYPSAW-GSWSHFQGTSKDD----GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 23 i~e~ig~G~-g~wtVy~g~~k~~----g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
+++.||.|. | .||+|+...- +-.||||........+ ..+.+..|.-+++.++||||+++++++++.
T Consensus 393 l~r~iG~GqFG--dVy~gvYt~~~kge~iaVAvKtCK~d~t~d-~tekflqEa~iMrnfdHphIikLIGv~~e~------ 463 (974)
T KOG4257|consen 393 LKRLIGEGQFG--DVYKGVYTDPEKGERIAVAVKTCKTDCTPD-DTEKFLQEASIMRNFDHPHIIKLIGVCVEQ------ 463 (974)
T ss_pred HHHhhcCCccc--ceeeeEecccccCcceeeeeehhccCCChh-hHHHHHHHHHHHHhCCCcchhheeeeeecc------
Confidence 345678888 8 9999987533 3468999987644433 477889999999999999999999999864
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
-+|||||.+ |.|..+|+.+... .....+..+.+||+.||.|||+ .++|||||-..||+|....-+||+|||+
T Consensus 464 ---P~WivmEL~~~GELr~yLq~nk~s--L~l~tL~ly~~Qi~talaYLeS-krfVHRDIAaRNiLVsSp~CVKLaDFGL 537 (974)
T KOG4257|consen 464 ---PMWIVMELAPLGELREYLQQNKDS--LPLRTLTLYCYQICTALAYLES-KRFVHRDIAARNILVSSPQCVKLADFGL 537 (974)
T ss_pred ---ceeEEEecccchhHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHh-hchhhhhhhhhheeecCcceeeecccch
Confidence 589999999 7899999987532 2234456679999999999997 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCCh-----------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKT----------- 243 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~----------- 243 (771)
++.+.+... +.......+..||+||.+.. ..++.++|+|.||+.|||++. |..||..
T Consensus 538 SR~~ed~~y-----YkaS~~kLPIKWmaPESINf------RrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iE 606 (974)
T KOG4257|consen 538 SRYLEDDAY-----YKASRGKLPIKWMAPESINF------RRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIE 606 (974)
T ss_pred hhhccccch-----hhccccccceeecCccccch------hcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEec
Confidence 998876421 11222233458999999876 467889999999999999987 5556632
Q ss_pred --hhhhccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 244 --EELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 244 --~~l~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
+.+....++|+.|..++.+|+..+|.+||++.++..
T Consensus 607 nGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~ 644 (974)
T KOG4257|consen 607 NGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKA 644 (974)
T ss_pred CCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHH
Confidence 223344678899999999999999999999988754
|
|
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.7e-26 Score=271.18 Aligned_cols=241 Identities=16% Similarity=0.213 Sum_probs=192.0
Q ss_pred CCCCCc---eecCCCCCCC-CceEEEEeEECCCCCc-----EEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEee
Q 004157 16 VKDLPY---NIGDPYPSAW-GSWSHFQGTSKDDGSP-----VSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLH 86 (771)
Q Consensus 16 ~~~~~Y---~i~e~ig~G~-g~wtVy~g~~k~~g~~-----VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d 86 (771)
++.+++ ++++.||.|. | .||.|+-..-... |+||.+.+. .+.+....+.+|..+++.+.|||||++++
T Consensus 686 lp~v~~~~v~l~~~lG~G~FG--~VY~g~~~~~~~~~~~~~vaiK~l~~~-~~~~~~~~Fl~Ea~~m~~f~HpNiv~liG 762 (1025)
T KOG1095|consen 686 LPEVPRKNVTLLRVLGKGAFG--EVYEGTYSDVPGSVSPIQVAVKSLKRL-SSEQEVSDFLKEALLMSKFDHPNIVSLIG 762 (1025)
T ss_pred cccCChhheEeeeeecccccc--ceEEEEEecCCCCccceEEEEEecccc-CCHHHHHHHHHHHHHHhcCCCcceeeEEE
Confidence 444554 5667899999 9 9999998755443 889988753 44456778899999999999999999999
Q ss_pred eEEecccCcCCcccEEEEEecCC--cchHHHHHHhCCCC----CCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCE
Q 004157 87 STEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEG----SQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSV 160 (771)
Q Consensus 87 ~~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~----~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI 160 (771)
+.-.. ...+|++||+ ++|..+|++..... ......+..+..+|++|++||++ .++|||||-..|+
T Consensus 763 v~l~~--------~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~-~~fvHRDLAaRNC 833 (1025)
T KOG1095|consen 763 VCLDS--------GPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLES-KHFVHRDLAARNC 833 (1025)
T ss_pred eecCC--------CCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHh-CCCcCcchhhhhe
Confidence 99863 2679999999 68999999863211 12233355668999999999996 8999999999999
Q ss_pred EEcCCCcEEEEccCcccccCCCCCCCCCCccccc--cccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-C
Q 004157 161 VVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYA--WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-G 237 (771)
Q Consensus 161 ~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~--~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g 237 (771)
++++...+|++|||+++.+... .+++.. ...+..|||||.+.. ..++.++|+||||+|+||+|+ |
T Consensus 834 LL~~~r~VKIaDFGlArDiy~~------~yyr~~~~a~lPvkWm~PEsl~d------~iFtskSDvWsFGVllWEifslG 901 (1025)
T KOG1095|consen 834 LLDERRVVKIADFGLARDIYDK------DYYRKHGEAMLPVKWMPPESLKD------GIFTSKSDVWSFGVLLWEIFSLG 901 (1025)
T ss_pred eecccCcEEEcccchhHhhhhc------hheeccCccccceecCCHHHHhh------cccccccchhhhHHHHHHHHhCC
Confidence 9999999999999999955432 122211 244569999999986 477889999999999999999 4
Q ss_pred CCCCChh-------------hhhccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 238 MRLSKTE-------------ELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 238 ~~p~~~~-------------~l~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
..|+... .+.....+|..+.+++.+|++.+|+.||++..+++.
T Consensus 902 ~~PY~~~~n~~v~~~~~~ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q 957 (1025)
T KOG1095|consen 902 ATPYPSRSNFEVLLDVLEGGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQ 957 (1025)
T ss_pred CCCCCCcchHHHHHHHHhCCccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhh
Confidence 4666432 234457789999999999999999999999999874
|
|
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.1e-26 Score=260.68 Aligned_cols=252 Identities=17% Similarity=0.253 Sum_probs=202.6
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEeccc
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENI 93 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~ 93 (771)
.+.--|+|.+.+|.|. | .||+++.+.+++.++||+.+.....+ +.+.-|..+|+.+. |||+..++.+|.....
T Consensus 16 dp~d~~ei~evig~Gtyg--kv~k~k~~~~~~~aa~kI~~~~~d~d---eEiE~eynil~~~~~hpnv~~fyg~~~k~~~ 90 (953)
T KOG0587|consen 16 DPADIFEIIEVIGNGTYG--KVYKGRHVKTGQLAAIKIMDPTEDEE---EEIELEYNMLKKYSHHPNVATFYGAFIKKDP 90 (953)
T ss_pred CCCCccEEEEEEeeccce--eEEEEeeeecCceeeeEeecCCcccc---HHHHHHHHHHHhccCCCCcceEEEEEEEecC
Confidence 3556799999999999 8 99999999999999999998754443 34566888999885 9999999999875443
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEE
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~ 171 (771)
.+ ++.+||||||| ++..+++++.. .....+++|+++++.++.||.+||+ .+++|||||-.||+++.+|.+||+
T Consensus 91 ~~---~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~-nkviHRDikG~NiLLT~e~~VKLv 165 (953)
T KOG0587|consen 91 GN---GDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHN-NKVIHRDIKGQNVLLTENAEVKLV 165 (953)
T ss_pred CC---CCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhh-cceeeecccCceEEEeccCcEEEe
Confidence 22 56999999999 57888887765 4555677899999999999999997 899999999999999999999999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCC-hhhhhccC
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSK-TEELRNTA 250 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~-~~~l~~~~ 250 (771)
|||++.+++..- -.+..+++++.|||||++... ......|...+|+||||++..||-.|.+|+- -...+.+.
T Consensus 166 DFGvSaQldsT~------grRnT~iGtP~WMAPEViac~-e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF 238 (953)
T KOG0587|consen 166 DFGVSAQLDSTV------GRRNTFIGTPYWMAPEVIACD-ESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALF 238 (953)
T ss_pred eeeeeeeeeccc------ccccCcCCCcccccceeeecc-cCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhc
Confidence 999998887632 223445666789999999764 2233457789999999999999999987753 33344443
Q ss_pred CCC--------------cchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 251 SIP--------------KSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 251 ~IP--------------~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
.|| +.+.++|..||..+-.+||+..++|+| +|..
T Consensus 239 ~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h-pFi~ 286 (953)
T KOG0587|consen 239 LIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH-PFIT 286 (953)
T ss_pred cCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC-Cccc
Confidence 333 246677899999999999999999999 4543
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.2e-27 Score=259.08 Aligned_cols=233 Identities=16% Similarity=0.232 Sum_probs=182.5
Q ss_pred eecCCCCCCC-CceEEEEeEECCCCC---c-EEEEEEeCCC-CchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 22 NIGDPYPSAW-GSWSHFQGTSKDDGS---P-VSIFSISGTN-AQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 22 ~i~e~ig~G~-g~wtVy~g~~k~~g~---~-VaIK~~~~~~-~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
++++++|+|. | .||.|+.+..+. . ||||....+. ........+.+|.++++.|+||||+++|++...+
T Consensus 160 ~l~kkLGeGaFG--eV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~---- 233 (474)
T KOG0194|consen 160 ELGKKLGEGAFG--EVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLE---- 233 (474)
T ss_pred cccceeeccccc--EEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCC----
Confidence 4457899999 9 999999886533 3 8999988632 4456677889999999999999999999988764
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
.-+|||||+| ++|.++|+..+.. .......+.+++.+.||.|||. .+++||||-..|++++.++.+||+||
T Consensus 234 ----~Pl~ivmEl~~gGsL~~~L~k~~~~--v~~~ek~~~~~~AA~Gl~YLh~-k~~IHRDIAARNcL~~~~~~vKISDF 306 (474)
T KOG0194|consen 234 ----EPLMLVMELCNGGSLDDYLKKNKKS--LPTLEKLRFCYDAARGLEYLHS-KNCIHRDIAARNCLYSKKGVVKISDF 306 (474)
T ss_pred ----CccEEEEEecCCCcHHHHHHhCCCC--CCHHHHHHHHHHHHhHHHHHHH-CCCcchhHhHHHheecCCCeEEeCcc
Confidence 3689999999 6899999987631 1222234559999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhhh-----
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR----- 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l~----- 247 (771)
|+++.-... .+....-..|..|+|||.+..+ .++.++|+|||||++||+|+ |..|+......
T Consensus 307 GLs~~~~~~------~~~~~~~klPirWLAPEtl~~~------~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~k 374 (474)
T KOG0194|consen 307 GLSRAGSQY------VMKKFLKKLPIRWLAPETLNTG------IFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAK 374 (474)
T ss_pred ccccCCcce------eeccccccCcceecChhhhccC------ccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHH
Confidence 997654311 1111111356799999999873 67889999999999999999 56666433211
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 248 ---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 248 ---------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
....-|..+...+.+|+..+|+.|++..++.+
T Consensus 375 I~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 375 IVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred HHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence 11345667888889999999999999988765
|
|
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.7e-27 Score=262.33 Aligned_cols=207 Identities=17% Similarity=0.235 Sum_probs=163.2
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
...|...+.+|.|+ | .||+|+++.+|+.||||.|.... .-...+...+|+++||+|+|||||+++++-++... +
T Consensus 12 ~y~W~~~e~LG~Ga~g--~V~rgrnketG~~vAvK~~~~~~-~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~--~ 86 (732)
T KOG4250|consen 12 NYLWEMDERLGKGAFG--NVYRGRNKETGRLVAVKTFNKES-SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFL--G 86 (732)
T ss_pred CcceeehhhhcCCccc--eeeeecccccccchhHHhhhhhc-ccchHHHHHHHHHHHHHcCchhhhhhcccCCcccc--C
Confidence 34577889999998 8 99999999999999999998643 22346678899999999999999999998765431 1
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC--CCc--EEE
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ--TLD--WKL 170 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~--~G~--~KL 170 (771)
.....-.+||||| ++|...|++-.......+..+...+..++.||.|||+ +||+||||||.||++-. +|. .||
T Consensus 87 ~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrE-n~IvHRDlKP~NIvl~~Gedgq~IyKL 165 (732)
T KOG4250|consen 87 LVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRE-NGIVHRDLKPGNIVLQIGEDGQSIYKL 165 (732)
T ss_pred cccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCcEEEeecCCCceEEee
Confidence 1123568999999 6899999764432233344456669999999999995 99999999999998843 333 899
Q ss_pred EccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCC
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSK 242 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~ 242 (771)
+|||+++..++... -....++..|.+||+.... +.++.-+|.|||||++|++.+|..||.
T Consensus 166 tDfG~Arel~d~s~-------~~S~vGT~~YLhPel~E~q-----~~y~~tVDLWS~GvtlY~caTG~lPF~ 225 (732)
T KOG4250|consen 166 TDFGAARELDDNSL-------FTSLVGTEEYLHPELYERQ-----KKYTATVDLWSFGVTLYECATGELPFI 225 (732)
T ss_pred ecccccccCCCCCe-------eeeecCchhhcChHHHhhc-----cCcCceeehhhhhhHHHHHhccCCCCC
Confidence 99999999877421 1123445599999998741 467889999999999999999998773
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.4e-26 Score=232.88 Aligned_cols=221 Identities=20% Similarity=0.322 Sum_probs=178.4
Q ss_pred EEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEEEEecCC--cch
Q 004157 35 SHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPV--MPL 112 (771)
Q Consensus 35 tVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iyIVtE~v--~~L 112 (771)
.||+|+.+.+|+.|++|++........ .+.+++|++.+++++|+||+++++.+... ...|+++|++ ++|
T Consensus 4 ~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~--------~~~~l~~e~~~~~~L 74 (244)
T smart00220 4 KVYLARDKKTGKLVAIKVIKKEKIKKK-RERILREISILKKLKHPNIVRLYDVFEDE--------DKLYLVMEYCDGGDL 74 (244)
T ss_pred EEEEEEECCCCcEEEEEEecccccccH-HHHHHHHHHHHHhCCCCcHHHHHhheeeC--------CEEEEEEeCCCCCCH
Confidence 899999998999999999986543322 57889999999999999999999999863 3789999999 379
Q ss_pred HHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccc
Q 004157 113 SEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQ 192 (771)
Q Consensus 113 ~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~ 192 (771)
..++..... .....+..++.+++.+|.|||+ .+++|+||+|.||+++.+|.++|+|||++........ .
T Consensus 75 ~~~~~~~~~---~~~~~~~~~~~~l~~~l~~lh~-~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~-------~ 143 (244)
T smart00220 75 FDLLKKRGR---LSEDEARFYARQILSALEYLHS-NGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGL-------L 143 (244)
T ss_pred HHHHHhccC---CCHHHHHHHHHHHHHHHHHHHH-cCeecCCcCHHHeEECCCCcEEEccccceeeeccccc-------c
Confidence 988876542 2344566679999999999996 8999999999999999999999999999987654210 1
Q ss_pred cccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCCh-hhhh-------c-c------C-CCCcch
Q 004157 193 YAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT-EELR-------N-T------A-SIPKSL 256 (771)
Q Consensus 193 ~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~-~~l~-------~-~------~-~IP~~l 256 (771)
........|++||...+ ...+.++|+|+||+++|++++|..++.. .... . . . .++..+
T Consensus 144 ~~~~~~~~~~~pE~~~~------~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (244)
T smart00220 144 TTFVGTPEYMAPEVLLG------KGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEA 217 (244)
T ss_pred ccccCCcCCCCHHHHcc------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHH
Confidence 11223347999999874 3456699999999999999999888754 2111 0 0 1 177889
Q ss_pred HHHHHHHhccCCCCCCChHHHhhCC
Q 004157 257 LPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 257 ~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
.+++.+|+..+|.+||++.++++++
T Consensus 218 ~~~i~~~l~~~p~~Rp~~~~~~~~~ 242 (244)
T smart00220 218 KDLIRKLLVKDPEKRLTAEEALQHP 242 (244)
T ss_pred HHHHHHHccCCchhccCHHHHhhCC
Confidence 9999999999999999999999984
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.8e-27 Score=264.43 Aligned_cols=235 Identities=19% Similarity=0.320 Sum_probs=177.7
Q ss_pred cCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccCcCCcccE
Q 004157 24 GDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDATSTKIT 101 (771)
Q Consensus 24 ~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d~~~~~~~ 101 (771)
.+.+|.|+ |. .||+|.. .|+.||||.+-. +....+.+|+..|+.-+ |||||+++..-.+ ...
T Consensus 514 ~eilG~Gs~Gt-~Vf~G~y--e~R~VAVKrll~-----e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d--------~qF 577 (903)
T KOG1027|consen 514 KEILGYGSNGT-VVFRGVY--EGREVAVKRLLE-----EFFDFAQREIQLLQESDEHPNVIRYYCSEQD--------RQF 577 (903)
T ss_pred HHHcccCCCCc-EEEEEee--CCceehHHHHhh-----HhHHHHHHHHHHHHhccCCCceEEEEeeccC--------Cce
Confidence 34567777 53 7999987 589999999763 35668999999999986 9999999976443 459
Q ss_pred EEEEecCC-cchHHHHHHh--CCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC---C--CcEEEEcc
Q 004157 102 IYIVTEPV-MPLSEKIKEL--GLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ---T--LDWKLHAF 173 (771)
Q Consensus 102 iyIVtE~v-~~L~~~L~~~--~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~---~--G~~KL~dF 173 (771)
+||+.|.| -+|.++++.. .... +........+.|+++||++||. ++||||||||.||+|+. + ...+|+||
T Consensus 578 ~YIalELC~~sL~dlie~~~~d~~~-~~~i~~~~~l~q~~~GlaHLHs-l~iVHRDLkPQNILI~~~~~~~~~ra~iSDf 655 (903)
T KOG1027|consen 578 LYIALELCACSLQDLIESSGLDVEM-QSDIDPISVLSQIASGLAHLHS-LKIVHRDLKPQNILISVPSADGTLRAKISDF 655 (903)
T ss_pred EEEEehHhhhhHHHHHhccccchhh-cccccHHHHHHHHHHHHHHHHh-cccccccCCCceEEEEccCCCcceeEEeccc
Confidence 99999999 6899999874 1111 1101123349999999999997 99999999999999976 3 45899999
Q ss_pred CcccccCCCCCCCCCCccc-cccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhC-CCCCChhhhhc---
Q 004157 174 DVLSEFDGNNEAANGPMLQ-YAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG-MRLSKTEELRN--- 248 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~-~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g-~~p~~~~~l~~--- 248 (771)
|+|..+..... .+.+ .+..++..|+|||++... ....++|||||||++|++++| ..||+..-.++
T Consensus 656 glsKkl~~~~s----S~~r~s~~sGt~GW~APE~L~~~------~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NI 725 (903)
T KOG1027|consen 656 GLSKKLAGGKS----SFSRLSGGSGTSGWQAPEQLRED------RKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANI 725 (903)
T ss_pred ccccccCCCcc----hhhcccCCCCcccccCHHHHhcc------ccCcccchhhcCceEEEEecCCccCCCchHHhhhhh
Confidence 99998875322 2222 233344599999999874 345699999999999999997 57886543321
Q ss_pred ---------cCCCCc-chHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 249 ---------TASIPK-SLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 249 ---------~~~IP~-~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
+...+. ...++|.+|++.+|..||++.++|.|+-|+..
T Consensus 726 l~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~ 773 (903)
T KOG1027|consen 726 LTGNYTLVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWDS 773 (903)
T ss_pred hcCccceeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccCCh
Confidence 122221 46788999999999999999999999655543
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.1e-28 Score=241.57 Aligned_cols=243 Identities=18% Similarity=0.257 Sum_probs=182.7
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
...+-.+.||.|. | .||..++..+|+.|+.|++..-..+-...+.+-+|++.|.-++|.||+..+|...-...+.
T Consensus 53 ~Di~PDRPIGYGAFG--VVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~df-- 128 (449)
T KOG0664|consen 53 QDIQPDRPIGYGAFG--VVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSF-- 128 (449)
T ss_pred ccCCCCCccccccee--EEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchH--
Confidence 3455567899998 9 8999999999999999998743222233566778999999999999999999876433221
Q ss_pred cccEEEEEecCCc-chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
-..+|++||.+. +|...|-.-.... .+.++-.+|||++||+|||+ ++|.||||||.|.+||.+...||||||++
T Consensus 129 -FqEiYV~TELmQSDLHKIIVSPQ~Ls---~DHvKVFlYQILRGLKYLHs-A~ILHRDIKPGNLLVNSNCvLKICDFGLA 203 (449)
T KOG0664|consen 129 -FQELYVLTELMQSDLHKIIVSPQALT---PDHVKVFVYQILRGLKYLHT-ANILHRDIKPGNLLVNSNCILKICDFGLA 203 (449)
T ss_pred -HHHHHHHHHHHHhhhhheeccCCCCC---cchhhhhHHHHHhhhHHHhh-cchhhccCCCccEEeccCceEEecccccc
Confidence 235799999984 5777665433222 22344559999999999997 99999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----hh-----
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LR----- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----l~----- 247 (771)
+..+.... ......+++..|++||++.+. ..|+.++||||.||++.|++..+.+|+... +.
T Consensus 204 Rvee~d~~-----~hMTqEVVTQYYRAPEiLMGa-----RhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdL 273 (449)
T KOG0664|consen 204 RTWDQRDR-----LNMTHEVVTQYYRAPELLMGA-----RRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDL 273 (449)
T ss_pred cccchhhh-----hhhHHHHHHHHhccHHHhhcc-----hhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHH
Confidence 87654321 111223455589999999986 688999999999999999998877764321 10
Q ss_pred -------------------------------ccCCCCc------chHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 -------------------------------NTASIPK------SLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 -------------------------------~~~~IP~------~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.++.+.. ....++++|+..+|..|.+.++.+.|
T Consensus 274 LGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~ 343 (449)
T KOG0664|consen 274 LGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQH 343 (449)
T ss_pred hCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccc
Confidence 0011211 24556788999999999999998887
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2e-26 Score=226.51 Aligned_cols=236 Identities=17% Similarity=0.255 Sum_probs=184.1
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccC
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENID 94 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d 94 (771)
.+.+|+|.+++|.|- + .||.|.+..+++.|.||++.. -..+.+++|+++|+.|+ ||||++++|...+..
T Consensus 36 ~~ddYeivrk~GRGKYS--EVFeg~~~~~~eK~ViKiLKP-----VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~-- 106 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYS--EVFEGINITNNEKCVIKILKP-----VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPE-- 106 (338)
T ss_pred ccchHHHHHHHcCccHh--hHhcccccCCCceEEEeeech-----HHHHHHHHHHHHHHhccCCCCeeehhhhhcCcc--
Confidence 567899999999998 7 999999999999999999874 23567899999999999 999999999998755
Q ss_pred cCCcccEEEEEecCCc--chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC-CCcEEEE
Q 004157 95 ATSTKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ-TLDWKLH 171 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~-~G~~KL~ 171 (771)
.....+|+|++. +...+..... .-.|.+.++|+++||.|||+ .||+|||+||.||+|+. .-..+|+
T Consensus 107 ----SktpaLiFE~v~n~Dfk~ly~tl~------d~dIryY~~elLkALdyCHS-~GImHRDVKPhNvmIdh~~rkLrlI 175 (338)
T KOG0668|consen 107 ----SKTPSLIFEYVNNTDFKQLYPTLT------DYDIRYYIYELLKALDYCHS-MGIMHRDVKPHNVMIDHELRKLRLI 175 (338)
T ss_pred ----ccCchhHhhhhccccHHHHhhhhc------hhhHHHHHHHHHHHHhHHHh-cCcccccCCcceeeechhhceeeee
Confidence 346789999994 4443333321 12277779999999999997 89999999999999995 5669999
Q ss_pred ccCcccccCCCCCCCCCCccccccc-cCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCC-Ch----hh
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWL-VGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLS-KT----EE 245 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~-~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~-~~----~~ 245 (771)
|+|++..+.... .|.-. ....|.-||++..- +.+..+.|+|||||++..|+..+.|| .. ++
T Consensus 176 DWGLAEFYHp~~--------eYnVRVASRyfKGPELLVdy-----~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQ 242 (338)
T KOG0668|consen 176 DWGLAEFYHPGK--------EYNVRVASRYFKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 242 (338)
T ss_pred ecchHhhcCCCc--------eeeeeeehhhcCCchheeec-----hhccccHHHHHHHHHHHHHHhccCcccCCCCCHHH
Confidence 999998765421 23222 23356789998753 56788999999999999998877654 21 11
Q ss_pred hhc---------------------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 246 LRN---------------------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 246 l~~---------------------------------------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
+-. ..-+.++..+++.++|..|...|+|+.+.+.|
T Consensus 243 LVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 243 LVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred HHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 100 01234668889999999999999999999998
Q ss_pred CCCCcc
Q 004157 281 SEYFQN 286 (771)
Q Consensus 281 ~~fF~n 286 (771)
+||..
T Consensus 323 -pyF~~ 327 (338)
T KOG0668|consen 323 -PYFAP 327 (338)
T ss_pred -chHHH
Confidence 66643
|
|
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.4e-26 Score=248.22 Aligned_cols=231 Identities=16% Similarity=0.252 Sum_probs=187.3
Q ss_pred ecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccE
Q 004157 23 IGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKIT 101 (771)
Q Consensus 23 i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~ 101 (771)
...++|.|. | .||.|++|.-.-.|+||.+... ...++.+..|..++|.|+|||+++++++|..+. -
T Consensus 271 MkhKLGGGQYG--eVYeGvWKkyslTvAVKtLKED---tMeveEFLkEAAvMKeikHpNLVqLLGVCT~Ep--------P 337 (1157)
T KOG4278|consen 271 MKHKLGGGQYG--EVYEGVWKKYSLTVAVKTLKED---TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEP--------P 337 (1157)
T ss_pred eeeccCCCccc--ceeeeeeeccceeeehhhhhhc---chhHHHHHHHHHHHHhhcCccHHHHhhhhccCC--------C
Confidence 345788887 8 9999999999999999998632 234667888999999999999999999998764 6
Q ss_pred EEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccccc
Q 004157 102 IYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (771)
Q Consensus 102 iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~ 179 (771)
+||||||+ +.|.++|++.+..... ...+.+...||..|++||.. .++|||||-..|.+|.++..+|+.|||+++.+
T Consensus 338 FYIiTEfM~yGNLLdYLRecnr~ev~-avvLlyMAtQIsSaMeYLEk-knFIHRDLAARNCLVgEnhiVKvADFGLsRlM 415 (1157)
T KOG4278|consen 338 FYIITEFMCYGNLLDYLRECNRSEVP-AVVLLYMATQISSAMEYLEK-KNFIHRDLAARNCLVGENHIVKVADFGLSRLM 415 (1157)
T ss_pred eEEEEecccCccHHHHHHHhchhhcc-hhHHHHHHHHHHHHHHHHHH-hhhhhhhhhhhhccccccceEEeeccchhhhh
Confidence 89999999 7899999998764433 23456778899999999995 89999999999999999999999999999998
Q ss_pred CCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh------------
Q 004157 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL------------ 246 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l------------ 246 (771)
.++.... +.+...+..|.|||-+..+ .++.++|+|+||+|+||+.+ |..|+..-++
T Consensus 416 tgDTYTA-----HAGAKFPIKWTAPEsLAyN------tFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyR 484 (1157)
T KOG4278|consen 416 TGDTYTA-----HAGAKFPIKWTAPESLAYN------TFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYR 484 (1157)
T ss_pred cCCceec-----ccCccCcccccCccccccc------ccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhcccc
Confidence 7642111 1122334589999988652 56679999999999999987 4456544332
Q ss_pred -hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 247 -RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 247 -~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.....+|+.+.+++..|++.+|..||++.++-+
T Consensus 485 M~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHq 518 (1157)
T KOG4278|consen 485 MDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQ 518 (1157)
T ss_pred ccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHH
Confidence 233578999999999999999999999988743
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.6e-27 Score=250.13 Aligned_cols=239 Identities=13% Similarity=0.177 Sum_probs=195.4
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
..++...+|.|+ | .|-.+..+.....+|+|++.+..- ...+.+.+.+|-++|..++.|.|+++|..|.++
T Consensus 421 dl~~iaTLGvGgFG--RVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~------ 492 (732)
T KOG0614|consen 421 DLKRIATLGVGGFG--RVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDS------ 492 (732)
T ss_pred hhhhhhhcccCccc--eEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccc------
Confidence 456666788888 8 787777766556688998876432 224567788999999999999999999999874
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
.++|+.||.| +.|...|+.++........ +++..+++|+.|||. .+||.|||||+|.+++.+|-.||.|||+
T Consensus 493 --kyvYmLmEaClGGElWTiLrdRg~Fdd~tar---F~~acv~EAfeYLH~-k~iIYRDLKPENllLd~~Gy~KLVDFGF 566 (732)
T KOG0614|consen 493 --KYVYMLMEACLGGELWTILRDRGSFDDYTAR---FYVACVLEAFEYLHR-KGIIYRDLKPENLLLDNRGYLKLVDFGF 566 (732)
T ss_pred --hhhhhhHHhhcCchhhhhhhhcCCcccchhh---hhHHHHHHHHHHHHh-cCceeccCChhheeeccCCceEEeehhh
Confidence 4899999999 5799999988765444433 448899999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh--------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~-------- 247 (771)
+..+.... .+..+++++.|.|||++.+ ++...++|.|+||+++|||++|.+||...+..
T Consensus 567 AKki~~g~-------KTwTFcGTpEYVAPEIILn------KGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILk 633 (732)
T KOG0614|consen 567 AKKIGSGR-------KTWTFCGTPEYVAPEIILN------KGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILK 633 (732)
T ss_pred HHHhccCC-------ceeeecCCcccccchhhhc------cCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHh
Confidence 99887632 2456777889999999987 57788999999999999999999999764422
Q ss_pred ------ccCCCCcchHHHHHHHhccCCCCCCC-----hHHHhhCCCCCcc
Q 004157 248 ------NTASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENSEYFQN 286 (771)
Q Consensus 248 ------~~~~IP~~l~~~i~~lL~~~P~~Rps-----~~~lL~~~~fF~n 286 (771)
-...|++...+++++|+..+|.+|.. +.++-+| .||.+
T Consensus 634 Gid~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH-~Wf~g 682 (732)
T KOG0614|consen 634 GIDKIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKH-RWFEG 682 (732)
T ss_pred hhhhhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhh-hhhhc
Confidence 12568889999999999999999986 5676666 45544
|
|
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.6e-27 Score=234.53 Aligned_cols=238 Identities=17% Similarity=0.190 Sum_probs=178.4
Q ss_pred CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHH-hcCCCCCeeEEeeeEEecccCcCCcccEE
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRL-RTVRHPNILAFLHSTEVENIDATSTKITI 102 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~L-k~LrHPnIlkv~d~~e~e~~d~~~~~~~i 102 (771)
..||.|. | +|++-.++.+|+..|||.+...+... ...+++.|.... +.-..|||++||+.+..|. ..
T Consensus 70 g~iG~G~fG--~V~KM~hk~sg~~mAVKrIr~~n~~k-eq~rll~e~d~~mks~~cp~IVkfyGa~F~EG--------dc 138 (361)
T KOG1006|consen 70 GEIGNGAFG--TVNKMLHKPSGKLMAVKRIRSNNIEK-EQKRLLMEHDTVMKSSNCPNIVKFYGALFSEG--------DC 138 (361)
T ss_pred HHhcCCcch--hhhhhhcCccCcEEEEEEeeeccchH-HHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCC--------ce
Confidence 3578888 8 99999999999999999998765533 334555566554 4456999999999988764 57
Q ss_pred EEEecCC-cchHHHHHHhC-C-CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccccc
Q 004157 103 YIVTEPV-MPLSEKIKELG-L-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (771)
Q Consensus 103 yIVtE~v-~~L~~~L~~~~-~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~ 179 (771)
||.||.+ .+|..+.+.-- . .....+..+..+....+.||.||.+..+||||||||+||+++..|.+||||||+|..+
T Consensus 139 WiCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqL 218 (361)
T KOG1006|consen 139 WICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQL 218 (361)
T ss_pred eeeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhH
Confidence 9999999 56554443211 0 1112233444456677899999998889999999999999999999999999999887
Q ss_pred CCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh-----hhhcc-----
Q 004157 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-----ELRNT----- 249 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~-----~l~~~----- 249 (771)
.++ +......+-..|||||.+...- .+|..++|+||||+.+||+.+|..|+... ++.++
T Consensus 219 v~S-------iAkT~daGCrpYmAPERi~p~~----~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdp 287 (361)
T KOG1006|consen 219 VDS-------IAKTVDAGCRPYMAPERIDPSD----KGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDP 287 (361)
T ss_pred HHH-------HHhhhccCCccccChhccCCcc----CCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCC
Confidence 652 2122223345899999987541 36888999999999999999999887532 22211
Q ss_pred ---------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 250 ---------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 250 ---------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
......+...+.-||..+-..||...+++++ +|++
T Consensus 288 p~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~-~fyr 331 (361)
T KOG1006|consen 288 PILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF-PFYR 331 (361)
T ss_pred CeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcC-chhh
Confidence 2355668888999999999999999998887 4543
|
|
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.3e-26 Score=242.17 Aligned_cols=242 Identities=16% Similarity=0.224 Sum_probs=194.9
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
.-|..-+.+|.|+ | .||-+..+.+|+-||+|.++++.... .-...+.||-++|.++..|.||.+-..||+
T Consensus 185 n~F~~~RvlGkGGFG--EV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeT------ 256 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFG--EVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFET------ 256 (591)
T ss_pred cceeeeEEEeccccc--ceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecC------
Confidence 3466677889988 8 99999999999999999998753322 234568899999999999999999999987
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
++.+|+|+..+ ++|.-+|-+.+..+....+ ..++..+|+.||.+||+ .+||.||+||+||++++.|.++|+|+|
T Consensus 257 --kd~LClVLtlMNGGDLkfHiyn~g~~gF~e~r-a~FYAAEi~cGLehlH~-~~iVYRDLKPeNILLDd~GhvRISDLG 332 (591)
T KOG0986|consen 257 --KDALCLVLTLMNGGDLKFHIYNHGNPGFDEQR-ARFYAAEIICGLEHLHR-RRIVYRDLKPENILLDDHGHVRISDLG 332 (591)
T ss_pred --CCceEEEEEeecCCceeEEeeccCCCCCchHH-HHHHHHHHHhhHHHHHh-cceeeccCChhheeeccCCCeEeeccc
Confidence 55999999999 6788788776543333333 45669999999999997 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh-------hhh
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-------ELR 247 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~-------~l~ 247 (771)
++..+..... + ...+++..|||||++.++ .|++..|.|+|||+||||+.|..||... ++.
T Consensus 333 LAvei~~g~~-----~--~~rvGT~GYMAPEvl~ne------~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvd 399 (591)
T KOG0986|consen 333 LAVEIPEGKP-----I--RGRVGTVGYMAPEVLQNE------VYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVD 399 (591)
T ss_pred eEEecCCCCc-----c--ccccCcccccCHHHHcCC------cccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHH
Confidence 9998876322 1 123556699999999884 5889999999999999999999998532 111
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCCCCCh-----HHHhhCCCCCcc
Q 004157 248 ---------NTASIPKSLLPDYQRLLSSMPSRRLNS-----SKLIENSEYFQN 286 (771)
Q Consensus 248 ---------~~~~IP~~l~~~i~~lL~~~P~~Rps~-----~~lL~~~~fF~n 286 (771)
-..+.+++..++.+.||..+|.+|... +++-+| +||++
T Consensus 400 rr~~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~H-pfFk~ 451 (591)
T KOG0986|consen 400 RRTLEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEH-PFFKD 451 (591)
T ss_pred HHHhcchhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhC-ccccc
Confidence 114566778888999999999999854 566666 78876
|
|
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.8e-26 Score=237.64 Aligned_cols=254 Identities=18% Similarity=0.214 Sum_probs=196.1
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecc
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVEN 92 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~ 92 (771)
+.--.|.+...+|.|+ | +|-.|.++.+.+.+|||++.+... ++...+.-..|-++|... +-|.+++++.+|.+-
T Consensus 346 i~~tDFnFl~VlGKGSFG--KVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTm- 422 (683)
T KOG0696|consen 346 IKATDFNFLMVLGKGSFG--KVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTM- 422 (683)
T ss_pred eeecccceEEEeccCccc--eeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhh-
Confidence 4445688888999999 9 999999999999999999987532 223345556677777766 467788888888763
Q ss_pred cCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEE
Q 004157 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL 170 (771)
+.+|+||||| ++|.-+|++.+...+.. ..++...|+-||-|||+ .+||.||||.+||+++..|.+||
T Consensus 423 -------DRLyFVMEyvnGGDLMyhiQQ~GkFKEp~---AvFYAaEiaigLFFLh~-kgIiYRDLKLDNvmLd~eGHiKi 491 (683)
T KOG0696|consen 423 -------DRLYFVMEYVNGGDLMYHIQQVGKFKEPV---AVFYAAEIAIGLFFLHS-KGIIYRDLKLDNVMLDSEGHIKI 491 (683)
T ss_pred -------hheeeEEEEecCchhhhHHHHhcccCCch---hhhhhHHHHHHhhhhhc-CCeeeeeccccceEeccCCceEe
Confidence 4899999999 67998998876433222 23448899999999997 89999999999999999999999
Q ss_pred EccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc--
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN-- 248 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~-- 248 (771)
.|||+|..-.-. ......+++++.|+|||++.. +.|+.++|.|++|+|+|||+.|++||+.++...
T Consensus 492 ~DFGmcKEni~~------~~TTkTFCGTPdYiAPEIi~Y------qPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF 559 (683)
T KOG0696|consen 492 ADFGMCKENIFD------GVTTKTFCGTPDYIAPEIIAY------QPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELF 559 (683)
T ss_pred eecccccccccC------CcceeeecCCCcccccceEEe------cccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Confidence 999999754321 223455677789999999876 588899999999999999999999998765322
Q ss_pred ------cC----CCCcchHHHHHHHhccCCCCCCChH----HHhhCCCCCcchhhhhhhhh
Q 004157 249 ------TA----SIPKSLLPDYQRLLSSMPSRRLNSS----KLIENSEYFQNKLVDTIHFM 295 (771)
Q Consensus 249 ------~~----~IP~~l~~~i~~lL~~~P~~Rps~~----~lL~~~~fF~n~lv~~~~~L 295 (771)
.. .++++...+.+.+|...|.+|+... +-+..++||++...+.++..
T Consensus 560 ~aI~ehnvsyPKslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDWek~E~~ 620 (683)
T KOG0696|consen 560 QAIMEHNVSYPKSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDWEKLERR 620 (683)
T ss_pred HHHHHccCcCcccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccHHHHhhc
Confidence 12 3445566778899999999998642 22333489987666554443
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.7e-25 Score=235.09 Aligned_cols=239 Identities=15% Similarity=0.188 Sum_probs=173.1
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHh--cCCCCCeeEEeeeEEecccCcC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLR--TVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk--~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
.-++.+.||.|. | .||+|.++ |+.||||+|.... .....+|.++.. .|||+||+.|+..-..++
T Consensus 212 qI~L~e~IGkGRyG--EVwrG~wr--Ge~VAVKiF~srd-----E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~---- 278 (513)
T KOG2052|consen 212 QIVLQEIIGKGRFG--EVWRGRWR--GEDVAVKIFSSRD-----ERSWFRETEIYQTVMLRHENILGFIAADNKDN---- 278 (513)
T ss_pred eeEEEEEecCcccc--ceeecccc--CCceEEEEecccc-----hhhhhhHHHHHHHHHhccchhhhhhhccccCC----
Confidence 456778899999 9 99999998 9999999998532 234555555555 479999999998765443
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcC-------CCceecCCCCCCEEEcCCCc
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNND-------CKLVHGNVCLSSVVVTQTLD 167 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~-------~~ivH~dIkp~NI~v~~~G~ 167 (771)
.+-+.+|+||+|- ++|+++|.+.... .+...+.++.++.||.+||.+ -.|.|||||..||+|..+|.
T Consensus 279 gs~TQLwLvTdYHe~GSL~DyL~r~tv~----~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~ 354 (513)
T KOG2052|consen 279 GSWTQLWLVTDYHEHGSLYDYLNRNTVT----TEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT 354 (513)
T ss_pred CceEEEEEeeecccCCcHHHHHhhccCC----HHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCc
Confidence 2367999999999 7999999986542 333456699999999999972 25999999999999999999
Q ss_pred EEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhC----C-----
Q 004157 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG----M----- 238 (771)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g----~----- 238 (771)
..|+|||++....+.... ..+.....+++.+|||||++...-..---..-..+||||||.++||+.-. +
T Consensus 355 C~IADLGLAv~h~~~t~~--idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey 432 (513)
T KOG2052|consen 355 CCIADLGLAVRHDSDTDT--IDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEY 432 (513)
T ss_pred EEEeeceeeEEecccCCc--ccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhh
Confidence 999999999877654221 12223334556699999998753111000111368999999999998752 1
Q ss_pred -CCCC--------hhhhhcc-------CCCCc---------chHHHHHHHhccCCCCCCChHHH
Q 004157 239 -RLSK--------TEELRNT-------ASIPK---------SLLPDYQRLLSSMPSRRLNSSKL 277 (771)
Q Consensus 239 -~p~~--------~~~l~~~-------~~IP~---------~l~~~i~~lL~~~P~~Rps~~~l 277 (771)
.||. .++++.+ .+||. .+..+++.|+..||..|.++-.+
T Consensus 433 ~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALri 496 (513)
T KOG2052|consen 433 QLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRI 496 (513)
T ss_pred cCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHH
Confidence 2331 1222221 34443 35667888999999999998665
|
|
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.7e-25 Score=240.61 Aligned_cols=234 Identities=15% Similarity=0.188 Sum_probs=184.8
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
...++++||+|. | .|+.+.-- .+..||||++...... .....+.+|+++|.+|+||||+.+++++..++
T Consensus 539 ~L~~~ekiGeGqFG--EVhLCeve-g~lkVAVK~Lr~~a~~-~~r~~F~kEIkiLsqLkhPNIveLvGVC~~De------ 608 (807)
T KOG1094|consen 539 RLRFKEKIGEGQFG--EVHLCEVE-GPLKVAVKILRPDATK-NARNDFLKEIKILSRLKHPNIVELLGVCVQDD------ 608 (807)
T ss_pred heehhhhhcCcccc--eeEEEEec-CceEEEEeecCcccch-hHHHHHHHHHHHHhccCCCCeeEEEeeeecCC------
Confidence 467889999999 9 99999854 4699999999865433 33567899999999999999999999998754
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
-+++||||+ ++|.++|.+.......... ...+..||+.|++||.+ +++|||||-+.|++|+.++.+||+|||.+
T Consensus 609 --PicmI~EYmEnGDLnqFl~aheapt~~t~~-~vsi~tqiasgmaYLes-~nfVHrd~a~rNcLv~~e~~iKiadfgms 684 (807)
T KOG1094|consen 609 --PLCMITEYMENGDLNQFLSAHELPTAETAP-GVSICTQIASGMAYLES-LNFVHRDLATRNCLVDGEFTIKIADFGMS 684 (807)
T ss_pred --chHHHHHHHhcCcHHHHHHhccCcccccch-hHHHHHHHHHHHHHHHh-hchhhccccccceeecCcccEEecCcccc
Confidence 789999999 7899999887543322222 23359999999999997 99999999999999999999999999999
Q ss_pred cccCCCCCCCCCCcccc--ccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhC--CCCCCh---hh----
Q 004157 177 SEFDGNNEAANGPMLQY--AWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG--MRLSKT---EE---- 245 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~--~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g--~~p~~~---~~---- 245 (771)
+.+-.. ++++. ..+.+.+|||+|.+.-+ ..+.++|+|+||+.+||+|.- ..|+.. ++
T Consensus 685 R~lysg------~yy~vqgr~vlpiRwmawEsillg------kFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven 752 (807)
T KOG1094|consen 685 RNLYSG------DYYRVQGRAVLPIRWMAWESILLG------KFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVEN 752 (807)
T ss_pred cccccC------CceeeecceeeeeeehhHHHHHhc------cccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHh
Confidence 976542 22222 23456699999998763 677899999999999999863 344421 11
Q ss_pred -------------hhccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 246 -------------LRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 246 -------------l~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
+....-.|..+.+++-+|++.+-++||+.+++-.
T Consensus 753 ~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~ 799 (807)
T KOG1094|consen 753 AGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHL 799 (807)
T ss_pred hhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHH
Confidence 0112346778889999999999999999998743
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.5e-24 Score=243.26 Aligned_cols=262 Identities=13% Similarity=0.105 Sum_probs=174.8
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEEC----------------CCCCcEEEEEEeCCCCch--h----------HHHHH
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSK----------------DDGSPVSIFSISGTNAQD--G----------HLAAA 66 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k----------------~~g~~VaIK~~~~~~~~~--~----------~~~~~ 66 (771)
....+|++.++||+|+ | +||+|... ..++.|+||.+....... . ..+..
T Consensus 142 ~~~d~F~i~~~LG~GgFG--~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~ 219 (507)
T PLN03224 142 WSSDDFQLRDKLGGGNFG--ITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETG 219 (507)
T ss_pred ccccCceEeeEeecCCCe--EEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchh
Confidence 3455899999999999 9 99999752 345689999987532110 0 11223
Q ss_pred HHHHHHHhcCCCCCe-----eEEeeeEEecccCcCCcccEEEEEecCC--cchHHHHHHhCCC-----------------
Q 004157 67 RNGVKRLRTVRHPNI-----LAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLE----------------- 122 (771)
Q Consensus 67 ~~ei~~Lk~LrHPnI-----lkv~d~~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~----------------- 122 (771)
..|+..+.+++|.++ +++++++.....++...+...|+|+||+ ++|.++|......
T Consensus 220 ~vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~ 299 (507)
T PLN03224 220 MVEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPD 299 (507)
T ss_pred HHHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhh
Confidence 346777778876654 6677776543322222245789999999 5788888642100
Q ss_pred ----CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccC
Q 004157 123 ----GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVG 198 (771)
Q Consensus 123 ----~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~ 198 (771)
.......+..++.||+.+|.|||+ .+++||||||+||+++.++.+||+|||++........ ........+
T Consensus 300 ~~~~~~~~~~~~~~i~~ql~~aL~~lH~-~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~-----~~~~~g~~t 373 (507)
T PLN03224 300 NMPQDKRDINVIKGVMRQVLTGLRKLHR-IGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN-----FNPLYGMLD 373 (507)
T ss_pred hcccccCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCchHhEEECCCCcEEEEeCcCccccccCCc-----cCccccCCC
Confidence 011123456678999999999996 8999999999999999999999999999876543110 001111224
Q ss_pred CCCCChhcccccccccc----------------CCCCCcchHHHHHHHHHHHhhCCC-CCCh-----hhh----------
Q 004157 199 AQYKPVELAKSDWTAVR----------------KSPPWSIDSWGLGCLIYELFSGMR-LSKT-----EEL---------- 246 (771)
Q Consensus 199 ~~Y~aPE~~~~~~~~~~----------------~~~~~~~Di~SLG~li~el~~g~~-p~~~-----~~l---------- 246 (771)
..|++||.+........ .......|+||+||++|+|++|.. ++.. ..+
T Consensus 374 p~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~ 453 (507)
T PLN03224 374 PRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRW 453 (507)
T ss_pred cceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHH
Confidence 58999998754211000 011235799999999999999863 3321 000
Q ss_pred ----------hccCCCCcchHHHHHHHhccCC---CCCCChHHHhhCCCCCcc
Q 004157 247 ----------RNTASIPKSLLPDYQRLLSSMP---SRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 247 ----------~~~~~IP~~l~~~i~~lL~~~P---~~Rps~~~lL~~~~fF~n 286 (771)
.....++....+++.+||..+| .+|+++.++|+| +||.+
T Consensus 454 r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H-p~f~~ 505 (507)
T PLN03224 454 RMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH-RFFLP 505 (507)
T ss_pred HhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC-CCcCC
Confidence 0113456678899999999765 689999999999 45543
|
|
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.9e-25 Score=243.09 Aligned_cols=235 Identities=15% Similarity=0.174 Sum_probs=187.2
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCC---CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDG---SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g---~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
..++.|.||+|. | .|++|.++.-+ -.||||++....... ....+.+|+..|.+|+|||+|++|+++.+
T Consensus 111 ~i~l~e~LG~GsFg--vV~rg~Wt~psgk~V~VAVKclr~d~l~~-~mddflrEas~M~~L~H~hliRLyGvVl~----- 182 (1039)
T KOG0199|consen 111 QIKLYELLGEGSFG--VVKRGTWTQPSGKHVNVAVKCLRDDSLNA-IMDDFLREASHMLKLQHPHLIRLYGVVLD----- 182 (1039)
T ss_pred HHHHHHHhcCccee--eEeeccccCCCCcEEeEEEEeccCCccch-hHHHHHHHHHHHHhccCcceeEEeeeecc-----
Confidence 456678899998 8 89999998654 378999987644432 57789999999999999999999999875
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
.-+.+|||.+ ++|.+.|.. ..........+..++.||+.|+.||.. .++|||||-..||++-.-..+||+||
T Consensus 183 ----qp~mMV~ELaplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLes-krlvHRDLAARNlllasprtVKI~DF 256 (1039)
T KOG0199|consen 183 ----QPAMMVFELAPLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLES-KRLVHRDLAARNLLLASPRTVKICDF 256 (1039)
T ss_pred ----chhhHHhhhcccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhh-hhhhhhhhhhhhheecccceeeeecc
Confidence 2689999999 789999987 333344455567779999999999997 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCcccc--ccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCC-CCCCh----hhh
Q 004157 174 DVLSEFDGNNEAANGPMLQY--AWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM-RLSKT----EEL 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~--~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~-~p~~~----~~l 246 (771)
|+.+.+..... ++.. ....+..|.|||.++. ..++.++|+|++|+.|||||+++ .|+.. .-+
T Consensus 257 GLmRaLg~ned-----~Yvm~p~rkvPfAWCaPEsLrh------~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL 325 (1039)
T KOG0199|consen 257 GLMRALGENED-----MYVMAPQRKVPFAWCAPESLRH------RKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQIL 325 (1039)
T ss_pred cceeccCCCCc-----ceEecCCCcCcccccCHhHhcc------ccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHH
Confidence 99998876432 1111 1223447899999986 46778999999999999999965 45532 112
Q ss_pred ---------hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 247 ---------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 247 ---------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
......|+.+.+++++|+..+|..||++..+.+
T Consensus 326 ~~iD~~erLpRPk~csedIY~imk~cWah~paDRptFsair~ 367 (1039)
T KOG0199|consen 326 KNIDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRE 367 (1039)
T ss_pred HhccccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHH
Confidence 222456778999999999999999999988754
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.6e-25 Score=235.30 Aligned_cols=253 Identities=13% Similarity=0.141 Sum_probs=195.2
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-----chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecc
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-----QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-----~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~ 92 (771)
-+|-+...+|.|+ + .||++.+...++.||||+-..... .+.+.+.+.+|.++.+.|.||.|+++||+|..++
T Consensus 463 ~RYLlLhLLGrGGFS--EVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDt 540 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFS--EVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDT 540 (775)
T ss_pred HHHHHHHHhccccHH--HHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecc
Confidence 3688888899997 6 899999998999999999875432 2245677889999999999999999999998753
Q ss_pred cCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcC-CCceecCCCCCCEEEc---CCC
Q 004157 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNND-CKLVHGNVCLSSVVVT---QTL 166 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~-~~ivH~dIkp~NI~v~---~~G 166 (771)
..+|-|.||| .+|.-+|+....-.+...+.| +.||+.||.||++. -.|||-||||.||++- .-|
T Consensus 541 -------dsFCTVLEYceGNDLDFYLKQhklmSEKEARSI---iMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacG 610 (775)
T KOG1151|consen 541 -------DSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSI---IMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACG 610 (775)
T ss_pred -------ccceeeeeecCCCchhHHHHhhhhhhHHHHHHH---HHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccc
Confidence 4899999999 369999998776544433334 89999999999972 2699999999999984 569
Q ss_pred cEEEEccCcccccCCCCCCCCCCcc-ccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh
Q 004157 167 DWKLHAFDVLSEFDGNNEAANGPML-QYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE 245 (771)
Q Consensus 167 ~~KL~dFgla~~~~~~~~~~~~~~~-~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~ 245 (771)
++||.|||++..+++........+- ...+.++-.|.|||.+.-+.. +...+.++|+||+|+++|.++.|+.||+.++
T Consensus 611 eIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgke--PPKIsnKVDVWSvGVIFyQClYGrKPFGhnq 688 (775)
T KOG1151|consen 611 EIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKE--PPKISNKVDVWSVGVIFYQCLYGRKPFGHNQ 688 (775)
T ss_pred eeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCC--CCccccceeeEeeehhhhhhhccCCCCCCch
Confidence 9999999999988876544322222 222334448999998764311 2345679999999999999999999997543
Q ss_pred hhc------------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 246 LRN------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 246 l~~------------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
-.+ -..+..+...+|++||...-..|..+.++-.+ +||.-
T Consensus 689 sQQdILqeNTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~d-pyllP 746 (775)
T KOG1151|consen 689 SQQDILQENTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACD-PYLLP 746 (775)
T ss_pred hHHHHHhhhchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccC-ccccc
Confidence 211 02345568889999999999999999997766 56543
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.6e-24 Score=229.44 Aligned_cols=135 Identities=16% Similarity=0.200 Sum_probs=117.3
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-----CC---CeeEEeeeE
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-----HP---NILAFLHST 88 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-----HP---nIlkv~d~~ 88 (771)
..+|-+.+++|-|. + |||.+.+..+.+.||+|+... .+.+.+.+..||++|++++ |+ +||+++|.|
T Consensus 77 ~gRY~v~rKLGWGHFS--TVWLawDtq~~r~VAlKVvKS---AqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~F 151 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFS--TVWLAWDTQNKRYVALKVVKS---AQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHF 151 (590)
T ss_pred CceEEEEEeccccccc--eeEEEeeccCCeEEEEEEEeh---hhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccc
Confidence 37899999999998 8 999999999999999999863 2356788999999999996 33 699999999
Q ss_pred EecccCcCCcccEEEEEecCCc-chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEE
Q 004157 89 EVENIDATSTKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV 162 (771)
Q Consensus 89 e~e~~d~~~~~~~iyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v 162 (771)
.....+ +.++|+|+|+.+ .|..+|+.....+.. ...++.+++||+.||.|||.+|+|||-||||+||++
T Consensus 152 khsGpN----G~HVCMVfEvLGdnLLklI~~s~YrGlp-l~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl 221 (590)
T KOG1290|consen 152 KHSGPN----GQHVCMVFEVLGDNLLKLIKYSNYRGLP-LSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLL 221 (590)
T ss_pred eecCCC----CcEEEEEehhhhhHHHHHHHHhCCCCCc-HHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeee
Confidence 988777 679999999996 588888887665543 445788899999999999999999999999999999
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.7e-24 Score=237.51 Aligned_cols=246 Identities=13% Similarity=0.212 Sum_probs=184.3
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
|...+.||.|. | .|..+.+.+++..||.|.+.+... ...+....+.|-.+|..-..+-||++|..|.+
T Consensus 631 Fvkik~iGvGAFG--eV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQD-------- 700 (1034)
T KOG0608|consen 631 FVKIKTIGVGAFG--EVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQD-------- 700 (1034)
T ss_pred eEEEeeecccccc--eeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEecc--------
Confidence 67778899999 9 999999999999999999986532 12345567788889999999999999999987
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
+.++|+||+|+ +++..+|-+.+..+ ++.-.+++..+.+|+++.|. .|+|||||||+||||+.+|.+||.|||+|
T Consensus 701 kdnLYFVMdYIPGGDmMSLLIrmgIFe---E~LARFYIAEltcAiesVHk-mGFIHRDiKPDNILIDrdGHIKLTDFGLC 776 (1034)
T KOG0608|consen 701 KDNLYFVMDYIPGGDMMSLLIRMGIFE---EDLARFYIAELTCAIESVHK-MGFIHRDIKPDNILIDRDGHIKLTDFGLC 776 (1034)
T ss_pred CCceEEEEeccCCccHHHHHHHhccCH---HHHHHHHHHHHHHHHHHHHh-ccceecccCccceEEccCCceeeeecccc
Confidence 45999999999 67888777766533 33445669999999999995 99999999999999999999999999999
Q ss_pred cccCCC---------CCCC------------CC---------------CccccccccCCCCCChhccccccccccCCCCC
Q 004157 177 SEFDGN---------NEAA------------NG---------------PMLQYAWLVGAQYKPVELAKSDWTAVRKSPPW 220 (771)
Q Consensus 177 ~~~~~~---------~~~~------------~~---------------~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~ 220 (771)
+-+.-. +... .+ .+.....+++..|+|||++.. .+++.
T Consensus 777 TGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r------~g~~q 850 (1034)
T KOG0608|consen 777 TGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLAR------TGYTQ 850 (1034)
T ss_pred ccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcc------cCccc
Confidence 743210 0000 00 011111123448999999875 57888
Q ss_pred cchHHHHHHHHHHHhhCCCCCChhhh----------hc------cCCCCcchHHHHHHHhccCCCCCCC--hHHHhhCCC
Q 004157 221 SIDSWGLGCLIYELFSGMRLSKTEEL----------RN------TASIPKSLLPDYQRLLSSMPSRRLN--SSKLIENSE 282 (771)
Q Consensus 221 ~~Di~SLG~li~el~~g~~p~~~~~l----------~~------~~~IP~~l~~~i~~lL~~~P~~Rps--~~~lL~~~~ 282 (771)
.+|.|+.|+++|||+.|.+||..+.. +. ..++.++...+|++|+- .++.|+. -++-++.++
T Consensus 851 ~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~-sad~RLGkng~d~vKaHp 929 (1034)
T KOG0608|consen 851 LCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCC-SADSRLGKNGADQVKAHP 929 (1034)
T ss_pred cchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHhc-ChhhhhcccchhhhhcCc
Confidence 99999999999999999999854321 11 14677888888887654 3456653 333334447
Q ss_pred CCcch
Q 004157 283 YFQNK 287 (771)
Q Consensus 283 fF~n~ 287 (771)
||+..
T Consensus 930 fFkgI 934 (1034)
T KOG0608|consen 930 FFKGI 934 (1034)
T ss_pred ccccc
Confidence 88653
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.8e-23 Score=205.08 Aligned_cols=210 Identities=21% Similarity=0.319 Sum_probs=169.6
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEEEE
Q 004157 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIV 105 (771)
Q Consensus 27 ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iyIV 105 (771)
|+.|. | .||+++...+|+.++||++....... ....+.+|++.++.++|++|+++++.+... ...|++
T Consensus 1 l~~g~~~--~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~--------~~~~~~ 69 (215)
T cd00180 1 LGEGGFG--TVYLARDKKTGKKVAIKIIKKEDSSS-LLEELLREIEILKKLNHPNIVKLYGVFEDE--------NHLYLV 69 (215)
T ss_pred CCcCCce--EEEEEEecCCCcEEEEEEeccccchh-HHHHHHHHHHHHHhcCCCCeeeEeeeeecC--------CeEEEE
Confidence 35554 5 99999998889999999998653321 346788999999999999999999999863 378999
Q ss_pred ecCCc--chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC-CCcEEEEccCcccccCCC
Q 004157 106 TEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ-TLDWKLHAFDVLSEFDGN 182 (771)
Q Consensus 106 tE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~-~G~~KL~dFgla~~~~~~ 182 (771)
+|++. +|.+++.... .......+...+.+++.+|.+||+ .+++|+||+|.||+++. ++.++|+|||.+......
T Consensus 70 ~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~-~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~ 146 (215)
T cd00180 70 MEYCEGGSLKDLLKENE--GKLSEDEILRILLQILEGLEYLHS-NGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSD 146 (215)
T ss_pred EecCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCC
Confidence 99995 7999888752 112344456669999999999996 89999999999999999 899999999999876542
Q ss_pred CCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhccCCCCcchHHHHHH
Q 004157 183 NEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTASIPKSLLPDYQR 262 (771)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~~~~IP~~l~~~i~~ 262 (771)
.. ..........|++||..... ..++.+.|+|+||+++|++ ..+.+++.+
T Consensus 147 ~~------~~~~~~~~~~~~~pe~~~~~-----~~~~~~~D~~~lg~~~~~l-------------------~~~~~~l~~ 196 (215)
T cd00180 147 KS------LLKTIVGTPAYMAPEVLLGK-----GYYSEKSDIWSLGVILYEL-------------------PELKDLIRK 196 (215)
T ss_pred cc------hhhcccCCCCccChhHhccc-----CCCCchhhhHHHHHHHHHH-------------------HHHHHHHHH
Confidence 11 01112234589999998652 2566789999999999999 568889999
Q ss_pred HhccCCCCCCChHHHhhC
Q 004157 263 LLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 263 lL~~~P~~Rps~~~lL~~ 280 (771)
|+..+|..||++.+++++
T Consensus 197 ~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 197 MLQKDPEKRPSAKEILEH 214 (215)
T ss_pred HhhCCcccCcCHHHHhhC
Confidence 999999999999999875
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.4e-24 Score=264.73 Aligned_cols=221 Identities=19% Similarity=0.273 Sum_probs=165.5
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~ 99 (771)
|+..+.+|.|+ | .||+|+++.+|..|+||++...... ...|++.+++++||||+++++++..+
T Consensus 692 ~~~~~~ig~G~~g--~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~l~~l~HpnIv~~~~~~~~~-------- 755 (968)
T PLN00113 692 LKEENVISRGKKG--ASYKGKSIKNGMQFVVKEINDVNSI------PSSEIADMGKLQHPNIVKLIGLCRSE-------- 755 (968)
T ss_pred CCcccEEccCCCe--eEEEEEECCCCcEEEEEEccCCccc------cHHHHHHHhhCCCCCcceEEEEEEcC--------
Confidence 44456788888 8 9999999999999999998643221 23468899999999999999999864
Q ss_pred cEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcC--CCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 100 ITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNND--CKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 100 ~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~--~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
...|+||||+ ++|.++++.. .......++.||+.||.|||.. .+++||||||+||+++.++..++. |+.
T Consensus 756 ~~~~lv~Ey~~~g~L~~~l~~l------~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~ 828 (968)
T PLN00113 756 KGAYLIHEYIEGKNLSEVLRNL------SWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSL 828 (968)
T ss_pred CCCEEEEeCCCCCcHHHHHhcC------CHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecc
Confidence 3689999999 5799998642 1223445599999999999942 489999999999999999888875 554
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-----h----
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-----L---- 246 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-----l---- 246 (771)
....... ....++..|+|||+..+ ..++.++|||||||++|||++|+.|+.... +
T Consensus 829 ~~~~~~~----------~~~~~t~~y~aPE~~~~------~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~ 892 (968)
T PLN00113 829 PGLLCTD----------TKCFISSAYVAPETRET------KDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWA 892 (968)
T ss_pred ccccccC----------CCccccccccCcccccC------CCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHH
Confidence 4322211 11133458999999875 357789999999999999999998864211 0
Q ss_pred ---------hc-c-CCC----C------cchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 ---------RN-T-ASI----P------KSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 ---------~~-~-~~I----P------~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.. . ..+ + ..+.+++.+|++.+|.+||++.++++.
T Consensus 893 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~ 947 (968)
T PLN00113 893 RYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKT 947 (968)
T ss_pred HHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence 00 0 001 1 124566789999999999999998764
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-24 Score=244.60 Aligned_cols=237 Identities=16% Similarity=0.201 Sum_probs=188.6
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCC---CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDG---SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g---~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
-.|.+.||.|. | .|++|+.|..| ..||||.++.. ..+.+...+..|..+|-++.||||+++.++....
T Consensus 631 i~Ie~VIGaGEFG--EVc~GrLk~pgkre~~VAIKTLK~G-ytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks----- 702 (996)
T KOG0196|consen 631 VKIEKVIGAGEFG--EVCSGRLKLPGKREITVAIKTLKAG-YTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKS----- 702 (996)
T ss_pred eEEEEEEeccccc--ceecccccCCCCcceeEEEeeeccC-ccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecC-----
Confidence 35677889998 9 99999998776 47999999754 3445566788899999999999999999998753
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
.-+.|||||| ++|+.+|+.+.-. .....+.-.|+-|+.|++||-+ .++|||||-..||+||.+-..|++|||
T Consensus 703 ---~PvMIiTEyMENGsLDsFLR~~DGq--ftviQLVgMLrGIAsGMkYLsd-m~YVHRDLAARNILVNsnLvCKVsDFG 776 (996)
T KOG0196|consen 703 ---KPVMIITEYMENGSLDSFLRQNDGQ--FTVIQLVGMLRGIASGMKYLSD-MNYVHRDLAARNILVNSNLVCKVSDFG 776 (996)
T ss_pred ---ceeEEEhhhhhCCcHHHHHhhcCCc--eEeehHHHHHHHHHHHhHHHhh-cCchhhhhhhhheeeccceEEEecccc
Confidence 4789999999 6899999987522 2222234448999999999995 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhh----hh--
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE----LR-- 247 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~----l~-- 247 (771)
+++.+.++.+ ..+...+...+.+|.|||.+.. ...+.++|+||+|++|||+++ |..|+.... ++
T Consensus 777 LSRvledd~~---~~ytt~GGKIPiRWTAPEAIa~------RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaI 847 (996)
T KOG0196|consen 777 LSRVLEDDPE---AAYTTLGGKIPIRWTAPEAIAY------RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 847 (996)
T ss_pred ceeecccCCC---ccccccCCccceeecChhHhhh------cccCchhhccccceEEEEecccCCCcccccchHHHHHHH
Confidence 9997765431 1222334445569999999875 467889999999999999887 555653211 11
Q ss_pred -------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 -------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 -------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....|..|..++..|++++-..||.+.+++..
T Consensus 848 e~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~ 887 (996)
T KOG0196|consen 848 EQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVST 887 (996)
T ss_pred HhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHH
Confidence 124567789999999999999999999998764
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.5e-24 Score=207.32 Aligned_cols=201 Identities=13% Similarity=0.109 Sum_probs=154.6
Q ss_pred eecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccCcCCcc
Q 004157 22 NIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDATSTK 99 (771)
Q Consensus 22 ~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d~~~~~ 99 (771)
.-++.+|.|+ | .|-+-+++.+|.-.|+|.+.....+. ....+.+|+.+..+. .+|.++.||+.+..+.
T Consensus 49 ~~i~elGrGayG--~vekmrh~~sg~imAvKri~~tvn~q-~q~r~L~dldi~~r~~~CPf~V~FyGa~~reg------- 118 (282)
T KOG0984|consen 49 VGIEELGRGAYG--VVEKMRHIQSGTIMAVKRIRATVNSQ-EQKRLLMDLDIIMRTVDCPFTVHFYGALFREG------- 118 (282)
T ss_pred hhhhhhcCCccc--hhhheeeccCCeEEEEeeehhhcChH-HHHHHHHhhhhhccCCCCCeEEEeehhhhccc-------
Confidence 3356788887 8 67777788899999999998765543 344556677766554 6999999999887654
Q ss_pred cEEEEEecCC-cchHHHHHHh-CCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 100 ITIYIVTEPV-MPLSEKIKEL-GLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 100 ~~iyIVtE~v-~~L~~~L~~~-~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
.++|.||.+ .+|+.+.++- .......+..+-.+...|+.||.|||++..++||||||+||++|.+|.+|+||||.+.
T Consensus 119 -dvwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG 197 (282)
T KOG0984|consen 119 -DVWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISG 197 (282)
T ss_pred -cEEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccce
Confidence 699999999 6776655442 2222333445667789999999999998899999999999999999999999999998
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCC
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSK 242 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~ 242 (771)
.+.++- ...-..+-.+|+|||.+..+.. .+.|+.++|+||||+.|.||..++.|+.
T Consensus 198 ~L~dSi-------Akt~daGCkpYmaPEri~~e~n--~~gY~vksDvWSLGItmiElA~lr~PY~ 253 (282)
T KOG0984|consen 198 YLVDSI-------AKTMDAGCKPYMAPERINPELN--QKGYSVKSDVWSLGITMIEMAILRFPYE 253 (282)
T ss_pred eehhhh-------HHHHhcCCCccCChhhcCcccC--cccceeehhhhhhhhhhhhhhhcccccc
Confidence 776531 1111223348999999986533 2478899999999999999999987764
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-24 Score=236.80 Aligned_cols=195 Identities=21% Similarity=0.215 Sum_probs=160.9
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC------chhHHHHHHHHHHHHhcCC---CCCeeEEeeeEE
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA------QDGHLAAARNGVKRLRTVR---HPNILAFLHSTE 89 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~------~~~~~~~~~~ei~~Lk~Lr---HPnIlkv~d~~e 89 (771)
.|+..+++|.|. | .|+.|++|+.+..|.||.+.++.- ++..+-.+-.|+++|.+|+ |+||++++++||
T Consensus 562 ~yttlq~lG~GAyG--kV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 562 DYTTLQPLGEGAYG--KVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE 639 (772)
T ss_pred cceeeeeccccccc--eEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence 599999999999 9 999999999999999999987531 1222334557999999998 999999999999
Q ss_pred ecccCcCCcccEEEEEecCCc---chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC
Q 004157 90 VENIDATSTKITIYIVTEPVM---PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL 166 (771)
Q Consensus 90 ~e~~d~~~~~~~iyIVtE~v~---~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G 166 (771)
++ .++||+||.-+ +|.++|...+...+... +++++||+.|+++||. .+|||||||-+||.|+.+|
T Consensus 640 dd--------d~yyl~te~hg~gIDLFd~IE~kp~m~E~eA---k~IFkQV~agi~hlh~-~~ivhrdikdenvivd~~g 707 (772)
T KOG1152|consen 640 DD--------DYYYLETEVHGEGIDLFDFIEFKPRMDEPEA---KLIFKQVVAGIKHLHD-QGIVHRDIKDENVIVDSNG 707 (772)
T ss_pred cC--------CeeEEEecCCCCCcchhhhhhccCccchHHH---HHHHHHHHhccccccc-cCceecccccccEEEecCC
Confidence 85 38999999985 59999988765444333 4459999999999995 9999999999999999999
Q ss_pred cEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCC
Q 004157 167 DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLS 241 (771)
Q Consensus 167 ~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~ 241 (771)
-+||+|||-+....+. |+- .++++..|.|||++.+. +..+..-|||+||+|+|.+.....|+
T Consensus 708 ~~klidfgsaa~~ksg------pfd--~f~gtv~~aapevl~g~-----~y~gk~qdiwalgillytivykenpy 769 (772)
T KOG1152|consen 708 FVKLIDFGSAAYTKSG------PFD--VFVGTVDYAAPEVLGGE-----KYLGKPQDIWALGILLYTIVYKENPY 769 (772)
T ss_pred eEEEeeccchhhhcCC------Ccc--eeeeeccccchhhhCCC-----ccCCCcchhhhhhheeeEEEeccCCC
Confidence 9999999998776653 221 24556699999999885 45567889999999999998876654
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.7e-24 Score=229.88 Aligned_cols=200 Identities=15% Similarity=0.218 Sum_probs=152.4
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHh--cCCCCCeeEEeeeEEecccCc
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLR--TVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk--~LrHPnIlkv~d~~e~e~~d~ 95 (771)
.+-++.+.+++|. | .||+|... ++.||||+|.. ...+.+.+|-.+.+ .|+|+||++|+..-+.-+.+
T Consensus 210 ~pl~l~eli~~Grfg--~V~KaqL~--~~~VAVKifp~-----~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~- 279 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFG--CVWKAQLD--NRLVAVKIFPE-----QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTAD- 279 (534)
T ss_pred CchhhHHHhhcCccc--eeehhhcc--CceeEEEecCH-----HHHHHHHhHHHHHhccCccchhHHHhhchhccCCcc-
Confidence 3677888899998 9 99999875 79999999974 23455666655554 56899999999876643322
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCC--------CceecCCCCCCEEEcCC
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDC--------KLVHGNVCLSSVVVTQT 165 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~--------~ivH~dIkp~NI~v~~~ 165 (771)
...++|||||. ++|.++|+.+...... ...++..+++||+|||++. .|+|||||..||+|..+
T Consensus 280 ---~~eywLVt~fh~kGsL~dyL~~ntisw~~----~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~D 352 (534)
T KOG3653|consen 280 ---RMEYWLVTEFHPKGSLCDYLKANTISWNS----LCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKND 352 (534)
T ss_pred ---ccceeEEeeeccCCcHHHHHHhccccHHH----HHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccC
Confidence 45899999999 7999999998654332 3445899999999999844 59999999999999999
Q ss_pred CcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCC
Q 004157 166 LDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMR 239 (771)
Q Consensus 166 G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~ 239 (771)
+...|+|||++..+........ ..+.+++.+|||||++.+.-..-....-.++||||+|.++|||++...
T Consensus 353 lTccIaDFGLAl~~~p~~~~~d----~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~ 422 (534)
T KOG3653|consen 353 LTCCIADFGLALRLEPGKPQGD----THGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCT 422 (534)
T ss_pred CcEEeeccceeEEecCCCCCcc----hhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999988764322111 223456679999999987532211222347999999999999998643
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-23 Score=215.69 Aligned_cols=250 Identities=16% Similarity=0.226 Sum_probs=189.9
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTV-RHPNILAFLHSTEVENID 94 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d 94 (771)
-..|.+.+.||.|+ . +|..+..+.+.+-||+|++.+.-.++ +.+.-...|-.....- .||.++.++.+|.+++
T Consensus 249 l~df~ll~vigrgsya--kvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtes-- 324 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYA--KVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTES-- 324 (593)
T ss_pred cccceeeeeecCcchh--hhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccc--
Confidence 34688999999986 4 89999999999999999998764333 3344445555555554 5999999999999875
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
.+++|.||| ++|.-++++.....++. ..++-..|+.||.|||+ .|||.||||.+||+++..|.+||.|
T Consensus 325 ------rlffvieyv~ggdlmfhmqrqrklpeeh---arfys~ei~lal~flh~-rgiiyrdlkldnvlldaeghikltd 394 (593)
T KOG0695|consen 325 ------RLFFVIEYVNGGDLMFHMQRQRKLPEEH---ARFYSAEICLALNFLHE-RGIIYRDLKLDNVLLDAEGHIKLTD 394 (593)
T ss_pred ------eEEEEEEEecCcceeeehhhhhcCcHHH---hhhhhHHHHHHHHHHhh-cCeeeeeccccceEEccCCceeecc
Confidence 899999999 57877776655433322 33447899999999997 8999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCCh---------
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT--------- 243 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~--------- 243 (771)
+|.|..--..+. ....+++++.|.|||++.+ ..|++.+|.|+||+||+||+.|+.||+-
T Consensus 395 ygmcke~l~~gd------~tstfcgtpnyiapeilrg------eeygfsvdwwalgvlmfemmagrspfdivgm~n~d~n 462 (593)
T KOG0695|consen 395 YGMCKEGLGPGD------TTSTFCGTPNYIAPEILRG------EEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMN 462 (593)
T ss_pred cchhhcCCCCCc------ccccccCCCcccchhhhcc------cccCceehHHHHHHHHHHHHcCCCCcceecCCCcccc
Confidence 999976443221 1345677789999999998 4889999999999999999999988842
Q ss_pred -hh------hhccCCCCcc----hHHHHHHHhccCCCCCCCh------HHHhhCCCCCcchhhhhhhh
Q 004157 244 -EE------LRNTASIPKS----LLPDYQRLLSSMPSRRLNS------SKLIENSEYFQNKLVDTIHF 294 (771)
Q Consensus 244 -~~------l~~~~~IP~~----l~~~i~~lL~~~P~~Rps~------~~lL~~~~fF~n~lv~~~~~ 294 (771)
++ +.....||.+ ....++..|+.+|++|... .++-.| .||++.-.+.++.
T Consensus 463 tedylfqvilekqiriprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h-~ffr~idwd~leq 529 (593)
T KOG0695|consen 463 TEDYLFQVILEKQIRIPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSH-AFFRSIDWDLLEQ 529 (593)
T ss_pred hhHHHHHHHhhhcccccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcc-hhhhhCCHHHHhh
Confidence 11 1122456665 4566888999999999853 344444 7887655554443
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.2e-22 Score=202.22 Aligned_cols=199 Identities=21% Similarity=0.281 Sum_probs=159.3
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~ 99 (771)
|.+++.|+.|. | +||+|+...+++.|+||.+...... ...+.+.+|++.++.++|+||+++++.+...
T Consensus 1 ~~~~~~i~~g~~~--~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~-------- 69 (225)
T smart00221 1 YELGKKLGEGAFG--KVYLARDKGTGELVAVKVLKKEKTE-KQREEFLREIRILKKLKHPNIVKLYGVFEDP-------- 69 (225)
T ss_pred CceeeEeecCCCe--EEEEEEEcCCCcEEEEEeeccccch-HHHHHHHHHHHHHHhCCCCChhhheeeeecC--------
Confidence 67788898887 7 9999999988999999999865433 2467889999999999999999999998763
Q ss_pred cEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 100 ITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 100 ~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
...|+++|++ ++|.+++...... .....+..++.|++.+|.|||+ .+++|+||+|.||+++.++.++|+|||++.
T Consensus 70 ~~~~~v~e~~~~~~L~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~lh~-~~i~h~di~~~ni~v~~~~~~~l~d~g~~~ 146 (225)
T smart00221 70 EPLYLVMEYCEGGDLFDYLRKKGGK--LSEEEARFYLRQILEALEYLHS-LGIVHRDLKPENILLGMDGLVKLADFGLAR 146 (225)
T ss_pred CceEEEEeccCCCCHHHHHHhcccC--CCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCCCEEEeeCceee
Confidence 3789999999 3799888775421 2344466679999999999996 899999999999999999999999999988
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCCh
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT 243 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~ 243 (771)
........ ..........|++||..... ..++.++|+|+||+++|+|++|..+|..
T Consensus 147 ~~~~~~~~-----~~~~~~~~~~~~~pe~~~~~-----~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 147 FIHRDLAA-----LLKTVKGTPFYLAPEVLLGG-----KGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred EecCcccc-----cccceeccCCcCCHhHhcCC-----CCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 76543200 01112334579999997411 3455689999999999999999988854
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=6e-22 Score=232.80 Aligned_cols=236 Identities=16% Similarity=0.197 Sum_probs=180.6
Q ss_pred ceecCCCCCCC-CceEEEEeEEC----C---CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEec
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSK----D---DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVE 91 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k----~---~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e 91 (771)
.++++.+|.|. | +|++|.-+ . ....|+||.+...... ...+.+..|+++|+.+. ||||+.+++.+...
T Consensus 298 l~~~~~lg~g~fG--~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~~~~El~~m~~~g~H~niv~llG~~t~~ 374 (609)
T KOG0200|consen 298 LKLGKYLGEGAFG--QVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKDLMSELNVLKELGKHPNIVNLLGACTQD 374 (609)
T ss_pred ccccceeeccccc--ceEeEEEeecccccccceEEEEEEecccccCc-HHHHHHHHHHHHHHHhcCCcchhhheeeeccC
Confidence 35667889988 8 88888743 1 1457999998765443 56788999999999985 99999999998762
Q ss_pred ccCcCCcccEEEEEecCC--cchHHHHHHhC---------CCCC----CcHHHHHHHHHHHHHHHHHHHcCCCceecCCC
Q 004157 92 NIDATSTKITIYIVTEPV--MPLSEKIKELG---------LEGS----QRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVC 156 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~---------~~~~----~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIk 156 (771)
..+++|+||| +.|..+|+... .... .....+.-+.+||+.|++||++ .++|||||-
T Consensus 375 --------~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~-~~~vHRDLA 445 (609)
T KOG0200|consen 375 --------GPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLAS-VPCVHRDLA 445 (609)
T ss_pred --------CceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhh-CCccchhhh
Confidence 3789999999 78999998876 1000 1223355669999999999997 899999999
Q ss_pred CCCEEEcCCCcEEEEccCcccccCCCCCCCCCCcccccc--ccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHH
Q 004157 157 LSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAW--LVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYEL 234 (771)
Q Consensus 157 p~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~--~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el 234 (771)
..||+++.+..+|++|||+++...... .+..... ..+..|||||.+.. ..++.++|+||+|+++||+
T Consensus 446 aRNVLi~~~~~~kIaDFGlar~~~~~~-----~y~~~~~~~~LP~kWmApEsl~~------~~ft~kSDVWSfGI~L~Ei 514 (609)
T KOG0200|consen 446 ARNVLITKNKVIKIADFGLARDHYNKD-----YYRTKSSAGTLPVKWMAPESLFD------RVFTSKSDVWSFGILLWEI 514 (609)
T ss_pred hhhEEecCCCEEEEccccceeccCCCC-----ceEecCCCCccceeecCHHHhcc------CcccccchhhHHHHHHHHH
Confidence 999999999999999999998655421 1110111 14557999999876 4678899999999999999
Q ss_pred hh-CCCCCCh----hhh----------hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 235 FS-GMRLSKT----EEL----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 235 ~~-g~~p~~~----~~l----------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
|+ |..|+.. .++ ......+.++.++++.|++.+|+.||++.++.+
T Consensus 515 fsLG~~PYp~~~~~~~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 515 FTLGGTPYPGIPPTEELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVE 574 (609)
T ss_pred hhCCCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 99 4455542 111 122345677888899999999999999998764
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.5e-23 Score=232.26 Aligned_cols=243 Identities=17% Similarity=0.231 Sum_probs=192.8
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
++-.|++..++|+|+ | .||+++++.+++.++||+++..... ....+..|+-+++..+||||+.|+..+-..
T Consensus 13 P~ddyellqrvgsgTyg--dvyKaRd~~s~elaavkvVkLep~d--d~~~iqqei~~~~dc~h~nivay~gsylr~---- 84 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYG--DVYKARDKRSGELAAVKVVKLEPGD--DFSGIQQEIGMLRDCRHPNIVAYFGSYLRR---- 84 (829)
T ss_pred CccchhheeeecCCccc--chhhhcccccCchhhheeeeccCCc--cccccccceeeeecCCCcChHHHHhhhhhh----
Confidence 677899999999999 9 9999999999999999999876444 356678899999999999999999999763
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..++|+|||| ++|.+...-.+. ..+..|.+..+..+++|+|||+ .+-+|||||-.||++++.|++||.||
T Consensus 85 ----dklwicMEycgggslQdiy~~Tgp---lselqiayvcRetl~gl~ylhs-~gk~hRdiKGanilltd~gDvklaDf 156 (829)
T KOG0576|consen 85 ----DKLWICMEYCGGGSLQDIYHVTGP---LSELQIAYVCRETLQGLKYLHS-QGKIHRDIKGANILLTDEGDVKLADF 156 (829)
T ss_pred ----cCcEEEEEecCCCcccceeeeccc---chhHHHHHHHhhhhccchhhhc-CCcccccccccceeecccCceeeccc
Confidence 3789999999 467765444332 3344577779999999999997 88899999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCC-CCChhhhhc----
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMR-LSKTEELRN---- 248 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~-p~~~~~l~~---- 248 (771)
|.+..+... ...+..+.++..||+||+..-+ .+..|...+|+|++|+...|+-.-.+ +|+...++.
T Consensus 157 gvsaqitat------i~KrksfiGtpywmapEvaave---rkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~Lm 227 (829)
T KOG0576|consen 157 GVSAQITAT------IAKRKSFIGTPYWMAPEVAAVE---RKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLM 227 (829)
T ss_pred Cchhhhhhh------hhhhhcccCCccccchhHHHHH---hcccccccccccccccchhhhhhcCCcccccchHHHHHHh
Confidence 998776542 1223445666789999997432 23467789999999988888765443 344433322
Q ss_pred ------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 249 ------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 249 ------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
-..-...+.++++.+|..+|++||+++.+|.| +|..
T Consensus 228 TkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h-~fvs 275 (829)
T KOG0576|consen 228 TKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQH-PFVS 275 (829)
T ss_pred hccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhheec-eeec
Confidence 12334458899999999999999999999997 5553
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.9e-22 Score=223.97 Aligned_cols=231 Identities=19% Similarity=0.232 Sum_probs=174.7
Q ss_pred cCCCCCCC-CceEEEEeEECCCCC----cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 24 GDPYPSAW-GSWSHFQGTSKDDGS----PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 24 ~e~ig~G~-g~wtVy~g~~k~~g~----~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.++||+|. | +||+|.+.-.|+ +|+||++....... .-..+..|+-+|.+|+|||+++++.++...
T Consensus 701 ~kvLGsgAfG--tV~kGiw~Pege~vKipVaiKvl~~~t~~~-~s~e~LdeAl~masldHpnl~RLLgvc~~s------- 770 (1177)
T KOG1025|consen 701 DKVLGSGAFG--TVYKGIWIPEGENVKIPVAIKVLIEFTSPK-ASIELLDEALRMASLDHPNLLRLLGVCMLS------- 770 (1177)
T ss_pred hceeccccce--eEEeeeEecCCceecceeEEEEeeccCCch-hhHHHHHHHHHHhcCCCchHHHHhhhcccc-------
Confidence 45688998 9 999999976665 78999887543332 234566789999999999999999999863
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
.+.|||+++ +.|.++++..+. .......+ .+.+||++||+|||. .++|||||-..||+|.+-..+|+.|||++
T Consensus 771 --~~qlvtq~mP~G~LlDyvr~hr~-~igsq~lL-nw~~QIAkgM~YLe~-qrlVHrdLaaRNVLVksP~hvkitdfgla 845 (1177)
T KOG1025|consen 771 --TLQLVTQLMPLGCLLDYVREHRD-NIGSQDLL-NWCYQIAKGMKYLEE-QRLVHRDLAARNVLVKSPNHVKITDFGLA 845 (1177)
T ss_pred --hHHHHHHhcccchHHHHHHHhhc-cccHHHHH-HHHHHHHHHHHHHHh-cchhhhhhhhhheeecCCCeEEEEecchh
Confidence 588999999 789999988542 12233333 349999999999995 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhh----------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE---------- 245 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~---------- 245 (771)
........ .+.......+..|+|-|.+.. ..++.++|+||||+.+||+++ |..|+..-.
T Consensus 846 ~ll~~d~~----ey~~~~gK~pikwmale~i~~------~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~ 915 (1177)
T KOG1025|consen 846 KLLAPDEK----EYSAPGGKVPIKWMALESIRI------RKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEK 915 (1177)
T ss_pred hccCcccc----cccccccccCcHHHHHHHhhc------cCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhc
Confidence 87765322 222222233446777777654 578889999999999999998 555554322
Q ss_pred ---hhccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 246 ---LRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 246 ---l~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
+.+....+-++.-.+.+|+..++..||++.++..
T Consensus 916 geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~ 952 (1177)
T KOG1025|consen 916 GERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAE 952 (1177)
T ss_pred cccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHH
Confidence 2222334455667778999999999999988754
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.1e-21 Score=236.19 Aligned_cols=202 Identities=20% Similarity=0.190 Sum_probs=137.4
Q ss_pred HhcCCC-CCeeEEeeeEEecccCcCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCc
Q 004157 73 LRTVRH-PNILAFLHSTEVENIDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKL 150 (771)
Q Consensus 73 Lk~LrH-PnIlkv~d~~e~e~~d~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~i 150 (771)
++.++| +||++++|++.....++ .....+++++|++ .+|.++|.... .......+..+++||+.||.|||+ ++|
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~-~gI 101 (793)
T PLN00181 26 SKSLSHIDYVRSLLGSHKEGNLDG-LDDDSIVRALECEDVSLRQWLDNPD--RSVDAFECFHVFRQIVEIVNAAHS-QGI 101 (793)
T ss_pred cchhhHHHHHHHhhcccCCccccc-cccchhhhhhccCCccHHHHHhccc--ccccHHHHHHHHHHHHHHHHHHHh-CCe
Confidence 456666 58888888874322111 1124688899988 68999997532 112344567789999999999996 999
Q ss_pred eecCCCCCCEEEcCCCcEEEEccCcccccCCCCCC-----CCC------------------------CccccccccCCCC
Q 004157 151 VHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEA-----ANG------------------------PMLQYAWLVGAQY 201 (771)
Q Consensus 151 vH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~-----~~~------------------------~~~~~~~~~~~~Y 201 (771)
+||||||+||||+..|.+|++|||.+......... ..+ +.......++..|
T Consensus 102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 181 (793)
T PLN00181 102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY 181 (793)
T ss_pred eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence 99999999999988888887777776543221000 000 0000112234469
Q ss_pred CChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh--hhcc--CCC-------CcchHHHHHHHhccCCCC
Q 004157 202 KPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE--LRNT--ASI-------PKSLLPDYQRLLSSMPSR 270 (771)
Q Consensus 202 ~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~--l~~~--~~I-------P~~l~~~i~~lL~~~P~~ 270 (771)
+|||++.+ ..++.++|||||||++|||++|.+++.... ...+ ..+ ......++.+||..+|.+
T Consensus 182 ~APE~~~~------~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~P~~ 255 (793)
T PLN00181 182 TSPEEDNG------SSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLRHRVLPPQILLNWPKEASFCLWLLHPEPSC 255 (793)
T ss_pred EChhhhcc------CCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHHHHhhcChhhhhcCHHHHHHHHHhCCCChhh
Confidence 99999876 356789999999999999999887764321 1100 011 123456678899999999
Q ss_pred CCChHHHhhCCCCCc
Q 004157 271 RLNSSKLIENSEYFQ 285 (771)
Q Consensus 271 Rps~~~lL~~~~fF~ 285 (771)
||++.++++|+ ||.
T Consensus 256 Rps~~eil~h~-~~~ 269 (793)
T PLN00181 256 RPSMSELLQSE-FIN 269 (793)
T ss_pred CcChHHHhhch-hhh
Confidence 99999999994 553
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.1e-21 Score=204.70 Aligned_cols=254 Identities=18% Similarity=0.228 Sum_probs=187.9
Q ss_pred CCceecCCCCCCC-CceEEEEeEECC---CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEeccc
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKD---DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENI 93 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~---~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~ 93 (771)
..|.+.++||.|+ + +||++++.. .++.|++|.+..... ...+.+|++.|..+. +-||+++.+++...
T Consensus 36 ~~~~~v~kigeGsFs--sv~~a~~~~~~~~~~~valk~i~~ts~----p~ri~~El~~L~~~gG~~ni~~~~~~~rnn-- 107 (418)
T KOG1167|consen 36 NAYKVVNKIGEGSFS--SVYKATDIEQDTKRRYVALKAIYRTSS----PSRILNELEMLYRLGGSDNIIKLNGCFRNN-- 107 (418)
T ss_pred hhhhhhccccccchh--hhhhhhHhhhccccceEeeeecccccC----chHHHHHHHHHHHhccchhhhcchhhhccC--
Confidence 4588999999998 8 899999987 688999999986433 345889999999997 89999999999864
Q ss_pred CcCCcccEEEEEecCCc--chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC-CCcEEE
Q 004157 94 DATSTKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ-TLDWKL 170 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~-~G~~KL 170 (771)
+...||+||.+ ...+++...+ ...+.|+++.++.||.++|. .|||||||||+|++.+. .+.-.|
T Consensus 108 ------d~v~ivlp~~~H~~f~~l~~~l~------~~~i~~Yl~~ll~Al~~~h~-~GIvHRDiKpsNFL~n~~t~rg~L 174 (418)
T KOG1167|consen 108 ------DQVAIVLPYFEHDRFRDLYRSLS------LAEIRWYLRNLLKALAHLHK-NGIVHRDIKPSNFLYNRRTQRGVL 174 (418)
T ss_pred ------CeeEEEecccCccCHHHHHhcCC------HHHHHHHHHHHHHHhhhhhc-cCccccCCCccccccccccCCceE
Confidence 38999999995 4556655543 23478889999999999996 99999999999999985 578999
Q ss_pred EccCcccccCCCC------------------CC-----------CCC---------CccccccccCCCCCChhccccccc
Q 004157 171 HAFDVLSEFDGNN------------------EA-----------ANG---------PMLQYAWLVGAQYKPVELAKSDWT 212 (771)
Q Consensus 171 ~dFgla~~~~~~~------------------~~-----------~~~---------~~~~~~~~~~~~Y~aPE~~~~~~~ 212 (771)
.|||++...+... .. ..+ +.......++..|+|||++...
T Consensus 175 vDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~-- 252 (418)
T KOG1167|consen 175 VDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRC-- 252 (418)
T ss_pred EechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhc--
Confidence 9999997221100 00 000 0111222344589999999764
Q ss_pred cccCCCCCcchHHHHHHHHHHHhhCCCCCC-h----------------hhhh------------c---------------
Q 004157 213 AVRKSPPWSIDSWGLGCLIYELFSGMRLSK-T----------------EELR------------N--------------- 248 (771)
Q Consensus 213 ~~~~~~~~~~Di~SLG~li~el~~g~~p~~-~----------------~~l~------------~--------------- 248 (771)
...+.++|+||.|+++..++++..||- . ..++ +
T Consensus 253 ---~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~ 329 (418)
T KOG1167|consen 253 ---PRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFE 329 (418)
T ss_pred ---cCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchh
Confidence 456679999999999999999876541 1 0000 0
Q ss_pred ------c--------------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcchhhhhhhhhhhhcc
Q 004157 249 ------T--------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKLVDTIHFMEILNL 300 (771)
Q Consensus 249 ------~--------------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n~lv~~~~~L~~l~~ 300 (771)
+ .-+|..+.+++.+||..||.+|+++++.|+| +||. ..-++...++.+..
T Consensus 330 s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH-pFF~-~~~~~~~~~~~~~~ 399 (418)
T KOG1167|consen 330 TLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH-PFFD-EADRTERGLQDLLQ 399 (418)
T ss_pred ccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcC-cCCc-chhhhhhhhHHHhh
Confidence 0 1123467788999999999999999999999 7887 33333444443333
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.3e-21 Score=197.12 Aligned_cols=225 Identities=15% Similarity=0.210 Sum_probs=166.7
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d~~~ 97 (771)
.|+|.+.+|.|. | .+-.+.++.+++.+++|-+..... ....+.+|++.--.|. |.||+.-|++-...
T Consensus 25 ~y~I~k~lgeG~Fg--kIlL~eHr~s~t~ivlKavp~p~t---t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt------ 93 (378)
T KOG1345|consen 25 VYTINKQLGEGRFG--KILLAEHRQSKTRIVLKAVPRPQT---TQADFVREFHYSFFLSPHQHIIDTYEVAFQT------ 93 (378)
T ss_pred hhhHHHHhccccee--eEEeeeccCCceEEEeeccCcchh---hHHHHHHHhccceeeccchhhhHHHHHHhhc------
Confidence 588999999999 9 999999999999999999986432 3456778988877776 88999988875422
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC--CCcEEEEcc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ--TLDWKLHAF 173 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~--~G~~KL~dF 173 (771)
...+++++||+ ++|...+...+.. +.+.+....|+++||.|+|+ .++||||||.+||+|-. .-.+|||||
T Consensus 94 -~d~YvF~qE~aP~gdL~snv~~~Gig----E~~~K~v~~ql~SAi~fMHs-knlVHRdlK~eNiLif~~df~rvKlcDF 167 (378)
T KOG1345|consen 94 -SDAYVFVQEFAPRGDLRSNVEAAGIG----EANTKKVFAQLLSAIEFMHS-KNLVHRDLKAENILIFDADFYRVKLCDF 167 (378)
T ss_pred -CceEEEeeccCccchhhhhcCccccc----HHHHHHHHHHHHHHHHHhhc-cchhhcccccceEEEecCCccEEEeeec
Confidence 23888999999 7898877765543 23355569999999999996 89999999999999943 346999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------- 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l------- 246 (771)
|..+..+..-. +..+ ...|.+||++..- ..-+-......|+|.||+++|.+++|..|++....
T Consensus 168 G~t~k~g~tV~-----~~~~----~~~y~~pe~~~~~-~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~ 237 (378)
T KOG1345|consen 168 GLTRKVGTTVK-----YLEY----VNNYHAPELCDTV-VNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWE 237 (378)
T ss_pred ccccccCceeh-----hhhh----hcccCCcHHHhhc-cccceEecccccchheeeeeeeeecCCCcchhhhccCchHHH
Confidence 99887654211 1111 2368888886532 11111234578999999999999999999864322
Q ss_pred ------hccCC-------CCcchHHHHHHHhccCCCCC
Q 004157 247 ------RNTAS-------IPKSLLPDYQRLLSSMPSRR 271 (771)
Q Consensus 247 ------~~~~~-------IP~~l~~~i~~lL~~~P~~R 271 (771)
+.... +.+.+..++++-|...++.|
T Consensus 238 ~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~dr 275 (378)
T KOG1345|consen 238 WEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDR 275 (378)
T ss_pred HHHHhcccCccCchhhcccCHHHHHHHHHhcCCccccc
Confidence 11223 33446666777888888888
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.7e-19 Score=188.03 Aligned_cols=242 Identities=16% Similarity=0.191 Sum_probs=178.7
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCC-----CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEec
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDG-----SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g-----~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e 91 (771)
..++++...+-+|+ | .||.|.+++.. +.|-+|.... .+.+-+...+..|--.|.-+.|||++.+.++...+
T Consensus 283 r~Rv~l~~llqEGtFG--ri~~gI~~eEdt~n~~q~v~vKTvk~-~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~ 359 (563)
T KOG1024|consen 283 RCRVRLSCLLQEGTFG--RIYRGIWREEDTYNDCQEVLVKTVKQ-HASQIQVNLLLQESMLLYGASHPNLLSVLGVSIED 359 (563)
T ss_pred hhheechhhhhcCchh--heeeeeecccCCcchHHHHHHHHHHh-cccHHHHHHHHHHHHHHhcCcCCCccceeEEEeec
Confidence 34556666667788 8 99999887543 3455555432 34445567788899999999999999999987653
Q ss_pred ccCcCCcccEEEEEecCC--cchHHHHHHhCCCC---CC--cHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC
Q 004157 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEG---SQ--RDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ 164 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~---~~--~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~ 164 (771)
. ..-++++.+. +.|..+|....... .+ ....+.....|++.|+++||+ .++||.||-..|.+|++
T Consensus 360 ~-------~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~-~~ViHkDiAaRNCvIdd 431 (563)
T KOG1024|consen 360 Y-------ATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHN-HGVIHKDIAARNCVIDD 431 (563)
T ss_pred c-------CcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHh-cCcccchhhhhcceehh
Confidence 2 2445666665 68999998543211 11 122344558899999999996 99999999999999999
Q ss_pred CCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCC-
Q 004157 165 TLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSK- 242 (771)
Q Consensus 165 ~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~- 242 (771)
.-.+||+|=.+++.+-..+... .......|..||++|.+.. ..++.++|+||||+++|||++ |+.|+.
T Consensus 432 ~LqVkltDsaLSRDLFP~DYhc----LGDnEnRPvkWMslEal~n------~~yssasDvWsfGVllWELmtlg~~Pyae 501 (563)
T KOG1024|consen 432 QLQVKLTDSALSRDLFPGDYHC----LGDNENRPVKWMSLEALQN------SHYSSASDVWSFGVLLWELMTLGKLPYAE 501 (563)
T ss_pred heeEEeccchhccccCcccccc----cCCCCCCcccccCHHHHhh------hhhcchhhhHHHHHHHHHHHhcCCCCccc
Confidence 9999999999988765432211 1111123458999999876 478899999999999999998 444432
Q ss_pred ------------hhhhhccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 243 ------------TEELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 243 ------------~~~l~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
...+.+..+.|+++...+.-|+...|++||+.+|+...
T Consensus 502 IDPfEm~~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~c 551 (563)
T KOG1024|consen 502 IDPFEMEHYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVIC 551 (563)
T ss_pred cCHHHHHHHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHH
Confidence 22245667899999999999999999999999997643
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.2e-18 Score=191.09 Aligned_cols=168 Identities=11% Similarity=0.057 Sum_probs=122.5
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECC-CCCcEEEEEEeCCCC---chhHHHHHHHHHHHHhcCCCCCeeE-EeeeEEe
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKD-DGSPVSIFSISGTNA---QDGHLAAARNGVKRLRTVRHPNILA-FLHSTEV 90 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~-~g~~VaIK~~~~~~~---~~~~~~~~~~ei~~Lk~LrHPnIlk-v~d~~e~ 90 (771)
....|++++.||.|+ | +||+|.++. +++.|+||++..... .+.....+++|+++|++|+|+||+. +++.
T Consensus 16 ~~~~Y~~~~~IG~G~fg--~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~--- 90 (365)
T PRK09188 16 LSARFVETAVLKRDVFS--TVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT--- 90 (365)
T ss_pred ccCCceEccEEeecCcE--EEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---
Confidence 345799999999998 8 999999886 677889998763311 2334567899999999999999985 4432
Q ss_pred cccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCC-CCCCEEEcCCCc
Q 004157 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNV-CLSSVVVTQTLD 167 (771)
Q Consensus 91 e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dI-kp~NI~v~~~G~ 167 (771)
+ ..||||||| ++|.. +.. . ... ..+.|++++|.|||+ .+++|||| ||+||+++.+|.
T Consensus 91 -~--------~~~LVmE~~~G~~L~~-~~~---~--~~~----~~~~~i~~aL~~lH~-~gIiHrDL~KP~NILv~~~~~ 150 (365)
T PRK09188 91 -G--------KDGLVRGWTEGVPLHL-ARP---H--GDP----AWFRSAHRALRDLHR-AGITHNDLAKPQNWLMGPDGE 150 (365)
T ss_pred -C--------CcEEEEEccCCCCHHH-hCc---c--chH----HHHHHHHHHHHHHHH-CCCeeCCCCCcceEEEcCCCC
Confidence 1 469999999 35652 211 0 111 227899999999996 89999999 999999999999
Q ss_pred EEEEccCcccccCCCCCCCCCCccccc----cccCCCCCChhcccccc
Q 004157 168 WKLHAFDVLSEFDGNNEAANGPMLQYA----WLVGAQYKPVELAKSDW 211 (771)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~----~~~~~~Y~aPE~~~~~~ 211 (771)
+||+|||+++.+..... ...+..+. ......|.+||++....
T Consensus 151 ikLiDFGlA~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~pe~~~~~~ 196 (365)
T PRK09188 151 AAVIDFQLASVFRRRGA--LYRIAAYEDLRHLLKHKRTYAPDALTPRE 196 (365)
T ss_pred EEEEECccceecccCcc--hhhhhhhhhhhhhhccCccCCcccCChhh
Confidence 99999999987754321 11221111 12233789999887543
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.75 E-value=7e-19 Score=204.87 Aligned_cols=245 Identities=17% Similarity=0.169 Sum_probs=177.4
Q ss_pred CCc-eecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCC---CCch-hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecc
Q 004157 19 LPY-NIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGT---NAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (771)
Q Consensus 19 ~~Y-~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~---~~~~-~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~ 92 (771)
-+| ..+..+|.|. | .|+...+....+....|.+... ...+ .....+..|+-+-.+|+||||+..++.+..-.
T Consensus 317 ~~y~~~~~~~g~ga~g--~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~ 394 (601)
T KOG0590|consen 317 EKYGKPGRVLGSGAYG--SVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEID 394 (601)
T ss_pred cccCCccceeeecccC--ceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcc
Confidence 346 3344566676 6 6888888877777777766421 1111 22223667888888999999988888776532
Q ss_pred cCcCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEE
Q 004157 93 IDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~ 171 (771)
.++-+|||| .+|...+....+..... +-..+.|++.||+|||. .|+.|||||++|++++.+|.+||+
T Consensus 395 --------~~~~~mE~~~~Dlf~~~~~~~~~~~~e---~~c~fKqL~~Gv~y~h~-~GiahrdlK~enll~~~~g~lki~ 462 (601)
T KOG0590|consen 395 --------GILQSMEYCPYDLFSLVMSNGKLTPLE---ADCFFKQLLRGVKYLHS-MGLAHRDLKLENLLVTENGILKII 462 (601)
T ss_pred --------cchhhhhcccHHHHHHHhcccccchhh---hhHHHHHHHHHHHHHHh-cCceeccCccccEEEecCCceEEe
Confidence 344459999 46888887763322222 33449999999999996 999999999999999999999999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh----
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---- 247 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~---- 247 (771)
|||.+..+.-..... .....+.++...|+|||++.+. ...+..+|+||.|++++.|.+|+.||......
T Consensus 463 Dfg~~~vf~~~~e~~--~~~~~g~~gS~pY~apE~~~~~-----~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~ 535 (601)
T KOG0590|consen 463 DFGAASVFRYPWEKN--IHESSGIVGSDPYLAPEVLTGK-----EYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF 535 (601)
T ss_pred ecCcceeeccCcchh--hhhhcCcccCCcCcCccccccc-----ccCcchhhhhhccceEEEEecCCCccccccccccch
Confidence 999987665432211 1223445566799999998874 34557899999999999999998877432111
Q ss_pred -----------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 -----------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 -----------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
-...+|...+.++.+||+.+|.+|.+++++++. +||+
T Consensus 536 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d-~W~~ 589 (601)
T KOG0590|consen 536 KTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILND-EWIR 589 (601)
T ss_pred hhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhC-hHhh
Confidence 113467888889999999999999999999987 5554
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.2e-17 Score=165.00 Aligned_cols=144 Identities=17% Similarity=0.111 Sum_probs=109.8
Q ss_pred cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCC
Q 004157 110 MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGP 189 (771)
Q Consensus 110 ~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~ 189 (771)
++|.++++..+. ......+..+++||+.||.|||+ .+ ||+||+++.+|.+|+ ||++.......
T Consensus 1 GsL~~~l~~~~~--~l~~~~~~~i~~qi~~~L~~lH~-~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~------ 63 (176)
T smart00750 1 VSLADILEVRGR--PLNEEEIWAVCLQCLRALRELHR-QA------KSGNILLTWDGLLKL--DGSVAFKTPEQ------ 63 (176)
T ss_pred CcHHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHh-cC------CcccEeEcCccceee--ccceEeecccc------
Confidence 468888876432 12344567779999999999997 44 999999999999999 99887654321
Q ss_pred ccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-----hhc----c-----------
Q 004157 190 MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-----LRN----T----------- 249 (771)
Q Consensus 190 ~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-----l~~----~----------- 249 (771)
..++..|+|||++.+ ..++.++|||||||++|||++|..|+.... +.. .
T Consensus 64 -----~~g~~~y~aPE~~~~------~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (176)
T smart00750 64 -----SRVDPYFMAPEVIQG------QSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNL 132 (176)
T ss_pred -----CCCcccccChHHhcC------CCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccH
Confidence 134568999999976 356789999999999999999998875321 100 0
Q ss_pred CCCCc--chHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 250 ASIPK--SLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 250 ~~IP~--~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
..++. .+.+++.+||..+|.+||++.++++|.
T Consensus 133 ~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~ 166 (176)
T smart00750 133 ESVSAARSFADFMRVCASRLPQRREAANHYLAHC 166 (176)
T ss_pred HHHHhhhhHHHHHHHHHhcccccccCHHHHHHHH
Confidence 11222 588899999999999999999999883
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.4e-17 Score=173.83 Aligned_cols=240 Identities=15% Similarity=0.150 Sum_probs=146.5
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCC----------CCCeeEEeee
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVR----------HPNILAFLHS 87 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~Lr----------HPnIlkv~d~ 87 (771)
.+..++.||.|. + .||.+++.++|++++||++..... .....+.+++|.-....+. |-.++..+|.
T Consensus 13 ~l~~~~~i~~g~~~--~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~ 90 (288)
T PF14531_consen 13 TLVRGRIIGKGGFS--IVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDL 90 (288)
T ss_dssp EEEEEEEEEEETTE--EEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEE
T ss_pred EEEEccccccCCce--EEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEE
Confidence 456677888886 6 899999999999999999986432 2234666666665554432 2244444554
Q ss_pred EEecccCc------CCccc---EEEEEecCC-cchHHHHHH---hCCCCCCcHHHH-HHHHHHHHHHHHHHHcCCCceec
Q 004157 88 TEVENIDA------TSTKI---TIYIVTEPV-MPLSEKIKE---LGLEGSQRDEYY-AWGLNQIAKAVSFLNNDCKLVHG 153 (771)
Q Consensus 88 ~e~e~~d~------~~~~~---~iyIVtE~v-~~L~~~L~~---~~~~~~~~~~~i-~~gl~QI~~aL~fLH~~~~ivH~ 153 (771)
....+... +.+.. +.+++|+.+ .+|.+++.. ............ .....|+++.+++||. .|+||+
T Consensus 91 ~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~-~GlVHg 169 (288)
T PF14531_consen 91 LRIPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHS-YGLVHG 169 (288)
T ss_dssp EEETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH-TTEEES
T ss_pred EEEcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhh-cceEec
Confidence 44321000 00011 236677776 567766543 322211111112 2224899999999997 899999
Q ss_pred CCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccc--cccccCCCCCcchHHHHHHHH
Q 004157 154 NVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSD--WTAVRKSPPWSIDSWGLGCLI 231 (771)
Q Consensus 154 dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~--~~~~~~~~~~~~Di~SLG~li 231 (771)
||+|+|+|++.+|.++|+||+.+...+.. + .. ...+..|.|||..... +....-.++.+.|.|+||++|
T Consensus 170 di~~~nfll~~~G~v~Lg~F~~~~r~g~~-------~-~~-~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~l 240 (288)
T PF14531_consen 170 DIKPENFLLDQDGGVFLGDFSSLVRAGTR-------Y-RC-SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITL 240 (288)
T ss_dssp T-SGGGEEE-TTS-EEE--GGGEEETTEE-------E-EG-GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHH
T ss_pred ccceeeEEEcCCCCEEEcChHHHeecCce-------e-ec-cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHH
Confidence 99999999999999999999988766541 1 11 2334579999987542 000112356789999999999
Q ss_pred HHHhhCCCCCChh--------hhhccCCCCcchHHHHHHHhccCCCCC
Q 004157 232 YELFSGMRLSKTE--------ELRNTASIPKSLLPDYQRLLSSMPSRR 271 (771)
Q Consensus 232 ~el~~g~~p~~~~--------~l~~~~~IP~~l~~~i~~lL~~~P~~R 271 (771)
|.|+++.-||... ......++|+.+..+|++||+.||.+|
T Consensus 241 y~lWC~~lPf~~~~~~~~~~~~f~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 241 YSLWCGRLPFGLSSPEADPEWDFSRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHHHSS-STCCCGGGSTSGGGGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred HHHHHccCCCCCCCccccccccchhcCCcCHHHHHHHHHHccCCcccC
Confidence 9999999887521 344456899999999999999999887
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.8e-16 Score=164.31 Aligned_cols=243 Identities=20% Similarity=0.281 Sum_probs=177.4
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchh-HHHHHHHHHHHHhcCCCC-CeeEEeeeEEecccCcCC
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDG-HLAAARNGVKRLRTVRHP-NILAFLHSTEVENIDATS 97 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~-~~~~~~~ei~~Lk~LrHP-nIlkv~d~~e~e~~d~~~ 97 (771)
|.+.+.+|.|. | .||.+.+. ..+++|.+........ ....+.+|++.++.+.|+ +|+++++.+...
T Consensus 2 ~~~~~~l~~g~~~--~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~------ 70 (384)
T COG0515 2 YRILRKLGEGSFG--EVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDE------ 70 (384)
T ss_pred ceeEEeecCCCCe--EEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecC------
Confidence 77888899777 7 89999987 8899999987654442 567888999999999988 799999999543
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC-cEEEEccC
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL-DWKLHAFD 174 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G-~~KL~dFg 174 (771)
...++++|++ ..|.+++................++.|++.+|.|+|. .+++||||||+||+++..+ ..++.|||
T Consensus 71 --~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~-~~~~hrd~kp~nil~~~~~~~~~l~dfg 147 (384)
T COG0515 71 --GSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHS-KGIIHRDIKPENILLDRDGRVVKLIDFG 147 (384)
T ss_pred --CEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHeeecCCCCeEEEeccC
Confidence 3589999999 3566666554311112334456669999999999996 8999999999999999998 79999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh--------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------- 246 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-------- 246 (771)
.+....................+...|++||...+.- ........|+|++|+++++++.|..|+.....
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~---~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~ 224 (384)
T COG0515 148 LAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLS---LAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTL 224 (384)
T ss_pred cceecCCCCccccccccccccccccccCCHHHhcCCC---CCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHH
Confidence 9985544221110000122334556899999987520 02456789999999999999999877643321
Q ss_pred hc---------cCCCC--------cchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 RN---------TASIP--------KSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 ~~---------~~~IP--------~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.. ...+. ..+.+++.+++..+|..|.+......+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 225 KIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred HHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 00 01111 246788889999999999998776554
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.4e-16 Score=165.13 Aligned_cols=205 Identities=13% Similarity=0.146 Sum_probs=166.8
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEeccc
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENI 93 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~ 93 (771)
+....|.+|++||+|. | .++.|++.-+|++||||.-..+ ....+++.|.+..|.|- .++|..+|.+-..
T Consensus 25 ~VG~hyrVGkKIGeGsFG--~lf~G~Nl~nne~VAIKfEPrk----S~APQLrdEYr~YKlL~g~~GIP~vYYFGqe--- 95 (449)
T KOG1165|consen 25 MVGPHYRVGKKIGEGSFG--VLFLGKNLYNNEPVAIKFEPRK----SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQE--- 95 (449)
T ss_pred EecccceeccccccCcce--eeecccccccCceEEEEecccc----CCcchHHHHHHHHHHHcCCCCCCceeeeccc---
Confidence 4456899999999999 9 9999999999999999986544 33567888999999986 7899999876654
Q ss_pred CcCCcccEEEEEecCCcc-hHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC-----c
Q 004157 94 DATSTKITIYIVTEPVMP-LSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL-----D 167 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v~~-L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G-----~ 167 (771)
+.+-.+|+|..+| |.+++.-++.. .....+..+..|++.-++++|+ ..+|.|||||+|.+|..-| .
T Consensus 96 -----G~~NiLVidLLGPSLEDLFD~CgR~--FSvKTV~miA~Qmi~rie~vH~-k~LIYRDIKPdNFLIGrp~~k~~n~ 167 (449)
T KOG1165|consen 96 -----GKYNILVIDLLGPSLEDLFDLCGRR--FSVKTVAMIAKQMITRIEYVHE-KDLIYRDIKPDNFLIGRPGTKDANV 167 (449)
T ss_pred -----cchhhhhhhhhCcCHHHHHHHhcCc--ccHHhHHHHHHHHHHHHHHHHh-cceeecccCccceeecCCCCCCCce
Confidence 4466899999975 77777665432 2345567779999999999996 8999999999999997544 3
Q ss_pred EEEEccCcccccCCCCCCCCCCccccccccCC-CCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCCh
Q 004157 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGA-QYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT 243 (771)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~-~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~ 243 (771)
+.++|||++..+.+.......|+.....+.|+ +||+-....+ +..+...|+=+||.++.+.+-|..||+.
T Consensus 168 IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlG------rEQSRRDDLEaLGHvFmYFLRGsLPWQG 238 (449)
T KOG1165|consen 168 IHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLG------REQSRRDDLEALGHVFMYFLRGSLPWQG 238 (449)
T ss_pred EEEEeccchhhhcCccccccCccccccccccceeeeEeecccc------chhhhhhhHHHhhhhhhhhccCCCcccc
Confidence 99999999999988766666677777677666 9998777666 4566789999999999999999888753
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.70 E-value=7.1e-16 Score=168.27 Aligned_cols=203 Identities=14% Similarity=0.106 Sum_probs=153.6
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCC-CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCC----CCeeEEeeeEE-ecc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDG-SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRH----PNILAFLHSTE-VEN 92 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g-~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrH----PnIlkv~d~~e-~e~ 92 (771)
.|+++++||.|+ | .||.+.+..++ ..+++|+......... ..++.|..+++.+.+ +++..+++... .
T Consensus 19 ~~~i~~~iG~G~fG--~V~~v~~~~~~~~~~a~K~e~~~~~~~~--~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~-- 92 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFG--AVYLVSDKSEKNKEYAKKLEKKELGSKP--SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRST-- 92 (322)
T ss_pred ceEEeeeccccCCc--eEEEEEecCCCCeeEEEEEEEecccCCC--ccchhHHHHHHHHhhhcCCCCCCEEEEeccCC--
Confidence 899999999998 9 99999998775 5788888765322221 157788999998873 58999998884 3
Q ss_pred cCcCCcccEEEEEecCCc-chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC-----
Q 004157 93 IDATSTKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL----- 166 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G----- 166 (771)
..+-||||+.++ +|.++.+... ........+..+..|++.+|++||+ .|++||||||+|+.+...+
T Consensus 93 ------~~~~~iVM~l~G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~-~G~iHRDiKp~N~~~g~~~~~~~~ 164 (322)
T KOG1164|consen 93 ------EDFNFIVMSLLGPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHS-KGFIHRDIKPENFVVGQSSRSEVR 164 (322)
T ss_pred ------CceeEEEEeccCccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHh-cCcccCCcCHHHeeecCCCCcccc
Confidence 347799999996 5888776655 3334445566668999999999996 9999999999999998653
Q ss_pred cEEEEccCccc--ccCCCCCCCCCCcc--ccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCC
Q 004157 167 DWKLHAFDVLS--EFDGNNEAANGPML--QYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSK 242 (771)
Q Consensus 167 ~~KL~dFgla~--~~~~~~~~~~~~~~--~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~ 242 (771)
.+.|.|||+++ .+.........+.. ...+.++.+|.++....+ ...+...|+||++.++.+++.|..|+.
T Consensus 165 ~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~------~e~~r~DDles~~Y~l~el~~g~LPW~ 238 (322)
T KOG1164|consen 165 TLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLG------IEQGRRDDLESLFYMLLELLKGSLPWE 238 (322)
T ss_pred eEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCC------CccCCchhhhhHHHHHHHHhcCCCCCc
Confidence 59999999999 43322211101111 123445669999998877 467789999999999999999976663
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.3e-16 Score=158.86 Aligned_cols=139 Identities=12% Similarity=0.084 Sum_probs=100.7
Q ss_pred cCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchh------------------------HHHHHHHHHHHHhcCCC
Q 004157 24 GDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDG------------------------HLAAARNGVKRLRTVRH 78 (771)
Q Consensus 24 ~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~------------------------~~~~~~~ei~~Lk~LrH 78 (771)
.+.||.|+ | +||.|++. +|++|+||++........ ......+|++.|++|.|
T Consensus 2 ~~~ig~G~~~--~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~ 78 (190)
T cd05147 2 NGCISTGKEA--NVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVT 78 (190)
T ss_pred CCccccccce--EEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 46789998 8 99999987 899999999976422110 01234569999999998
Q ss_pred CCeeEEeeeEEecccCcCCcccEEEEEecCCc--chHHH-HHHhCCCCCCcHHHHHHHHHHHHHHHHHH-HcCCCceecC
Q 004157 79 PNILAFLHSTEVENIDATSTKITIYIVTEPVM--PLSEK-IKELGLEGSQRDEYYAWGLNQIAKAVSFL-NNDCKLVHGN 154 (771)
Q Consensus 79 PnIlkv~d~~e~e~~d~~~~~~~iyIVtE~v~--~L~~~-L~~~~~~~~~~~~~i~~gl~QI~~aL~fL-H~~~~ivH~d 154 (771)
++|...... +.. ..|||||||+ .|... ++... .....+...+.|++.+|.+| |. ++++|||
T Consensus 79 ~~v~~p~~~-~~~---------~~~iVmE~i~g~~l~~~~~~~~~----~~~~~~~~i~~qi~~~L~~l~H~-~giiHrD 143 (190)
T cd05147 79 AGIPCPEPI-LLK---------SHVLVMEFIGDDGWAAPRLKDAP----LSESKARELYLQVIQIMRILYQD-CRLVHAD 143 (190)
T ss_pred CCCCCCcEE-Eec---------CCEEEEEEeCCCCCcchhhhcCC----CCHHHHHHHHHHHHHHHHHHHHh-CCcccCC
Confidence 887443322 221 2389999994 34333 33222 22344566699999999999 65 8999999
Q ss_pred CCCCCEEEcCCCcEEEEccCcccccCC
Q 004157 155 VCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (771)
Q Consensus 155 Ikp~NI~v~~~G~~KL~dFgla~~~~~ 181 (771)
|||+||+++ +|.++|+|||++.....
T Consensus 144 lkP~NIli~-~~~v~LiDFG~a~~~~~ 169 (190)
T cd05147 144 LSEYNLLYH-DGKLYIIDVSQSVEHDH 169 (190)
T ss_pred CCHHHEEEE-CCcEEEEEccccccCCC
Confidence 999999998 58899999999976543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.8e-16 Score=161.22 Aligned_cols=178 Identities=8% Similarity=0.012 Sum_probs=126.9
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHH------HHHHHHHHhcCCCCCeeEEeeeE
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAA------ARNGVKRLRTVRHPNILAFLHST 88 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~------~~~ei~~Lk~LrHPnIlkv~d~~ 88 (771)
-+.+|.+.+.++.|+ | .||.... ++..|+||++..+.... ..... +++|++.+.+|+||||..+.+++
T Consensus 29 l~~~y~~~~~l~~~~f~--~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~ 104 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDT--KVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFY 104 (232)
T ss_pred hhCceEEEEEecCCCce--EEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEee
Confidence 356899999999887 8 8998654 47789999998654333 22223 67999999999999999999997
Q ss_pred EecccCcCCcccEEEEEecCCc--chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC
Q 004157 89 EVENIDATSTKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL 166 (771)
Q Consensus 89 e~e~~d~~~~~~~iyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G 166 (771)
+.............|||||||. +|.+... ..... +.+|+.+|..||. .|++|||++|+||+++.+|
T Consensus 105 ~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~~~----~~~i~~~l~~lH~-~gi~H~Dikp~Nili~~~g 172 (232)
T PRK10359 105 LLAERKTLRYAHTYIMLIEYIEGVELNDMPE-------ISEDV----KAKIKASIESLHQ-HGMVSGDPHKGNFIVSKNG 172 (232)
T ss_pred eecccccccccCCeEEEEEEECCccHHHhhh-------ccHHH----HHHHHHHHHHHHH-cCCccCCCChHHEEEeCCC
Confidence 7543210000135799999993 5766521 11222 6799999999996 8999999999999999999
Q ss_pred cEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHh
Q 004157 167 DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELF 235 (771)
Q Consensus 167 ~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~ 235 (771)
++|+|||........... . . +.. ...+..++|+|+||+.+.-+.
T Consensus 173 -i~liDfg~~~~~~e~~a~---d----------~-----~vl------er~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 173 -LRIIDLSGKRCTAQRKAK---D----------R-----IDL------ERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred -EEEEECCCcccccchhhH---H----------H-----HHH------HhHhcccccccceeEeehHHH
Confidence 999999988765431100 0 0 111 123446899999998765443
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.64 E-value=9.6e-16 Score=154.36 Aligned_cols=141 Identities=13% Similarity=0.105 Sum_probs=104.4
Q ss_pred ecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch------------------------hHHHHHHHHHHHHhcCC
Q 004157 23 IGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD------------------------GHLAAARNGVKRLRTVR 77 (771)
Q Consensus 23 i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~------------------------~~~~~~~~ei~~Lk~Lr 77 (771)
|.+.||.|+ | +||+|++. +|+.|+||++....... .....+++|++.+.+++
T Consensus 1 ~~~~ig~G~~~--~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 77 (190)
T cd05145 1 INGCISTGKEA--NVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLY 77 (190)
T ss_pred CCceeecCCCc--EEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 356788888 8 99999987 89999999998652110 01233468999999999
Q ss_pred CCCeeEEeeeEEecccCcCCcccEEEEEecCCcc--hH-HHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecC
Q 004157 78 HPNILAFLHSTEVENIDATSTKITIYIVTEPVMP--LS-EKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGN 154 (771)
Q Consensus 78 HPnIlkv~d~~e~e~~d~~~~~~~iyIVtE~v~~--L~-~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~d 154 (771)
|++|......... ..||||||+.. +. ..+..... .......++.|++.+|.+||...|++|||
T Consensus 78 ~~~i~~p~~~~~~----------~~~lVmE~~~g~~~~~~~l~~~~~----~~~~~~~i~~~l~~~l~~lH~~~givHrD 143 (190)
T cd05145 78 EAGVPVPEPILLK----------KNVLVMEFIGDDGSPAPRLKDVPL----EEEEAEELYEQVVEQMRRLYQEAGLVHGD 143 (190)
T ss_pred hCCCCCceEEEec----------CCEEEEEEecCCCchhhhhhhccC----CHHHHHHHHHHHHHHHHHHHHhCCEecCC
Confidence 9987544443322 23899999942 32 33443322 22334556899999999999648999999
Q ss_pred CCCCCEEEcCCCcEEEEccCcccccCC
Q 004157 155 VCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (771)
Q Consensus 155 Ikp~NI~v~~~G~~KL~dFgla~~~~~ 181 (771)
|||+||+++ +|.++|+|||++.....
T Consensus 144 lkP~NIll~-~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 144 LSEYNILYH-DGKPYIIDVSQAVELDH 169 (190)
T ss_pred CChhhEEEE-CCCEEEEEcccceecCC
Confidence 999999998 89999999999987654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.59 E-value=3.8e-15 Score=148.47 Aligned_cols=203 Identities=14% Similarity=0.099 Sum_probs=150.1
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCC-CCeeEEeeeEEecccC
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRH-PNILAFLHSTEVENID 94 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrH-PnIlkv~d~~e~e~~d 94 (771)
..-+|.+.++||+|+ | .+|.|....+|+.||||+-..+. . ...+..|.++.+.|+| ++|..+..+..+.
T Consensus 13 v~gky~lvrkiGsGSFG--dIy~~~~i~~ge~VAiK~Es~~a-~---hpqL~yEskvY~iL~~g~GiP~i~~y~~e~--- 83 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFG--DIYLGISITSGEEVAIKLESSKA-K---HPQLLYESKVYRILQGGVGIPHIRHYGTEK--- 83 (341)
T ss_pred eccceEEEEeecCCchh--heeeeeeccCCceEEEEeecccC-C---CcchhHHHHHHHHhccCCCCchhhhhcccc---
Confidence 345799999999999 9 99999999999999999966432 2 2356678999999984 5677777766553
Q ss_pred cCCcccEEEEEecCCcc-hHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC---CCcEEE
Q 004157 95 ATSTKITIYIVTEPVMP-LSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ---TLDWKL 170 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v~~-L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~---~G~~KL 170 (771)
.+-.+||+..+| |.+++.-.... .....+....-|++.-++|+|. .++|||||||+|.+..- ...+.|
T Consensus 84 -----~ynvlVMdLLGPsLEdLfnfC~R~--ftmkTvLMLaDQml~RiEyvH~-r~fiHRDIKPdNFLMGlgrh~~kl~L 155 (341)
T KOG1163|consen 84 -----DYNVLVMDLLGPSLEDLFNFCSRR--FTMKTVLMLADQMLSRIEYVHL-RNFIHRDIKPDNFLMGLGRHCNKLYL 155 (341)
T ss_pred -----ccceeeeeccCccHHHHHHHHhhh--hhHHhHHHHHHHHHHHHHHHHh-hccccccCCccceeeccccccceEEE
Confidence 366999999975 66666543321 1223344557899999999996 89999999999999863 355899
Q ss_pred EccCcccccCCCCCCCCCCccccccccC-CCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCC
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVG-AQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSK 242 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~-~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~ 242 (771)
+|||++..+.+.......|+..-..+.| .+|.+-....+ ...+...|+=|+|.++.++--|.-||+
T Consensus 156 IDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g------~eqSRRDDmeSvgYvLmYfnrG~LPWQ 222 (341)
T KOG1163|consen 156 IDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLG------IEQSRRDDMESVGYVLMYFNRGSLPWQ 222 (341)
T ss_pred EeccchhhhccccccccCccccCCccceeeeehhhhhhhh------hhhhhhhhhhhhcceeeeeecCCCccc
Confidence 9999999887755544445554433334 48877655443 234567899999988877777777765
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.2e-14 Score=153.83 Aligned_cols=192 Identities=18% Similarity=0.166 Sum_probs=131.8
Q ss_pred CCCCeeEEeeeEEecccC-------------------cCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHH
Q 004157 77 RHPNILAFLHSTEVENID-------------------ATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQ 136 (771)
Q Consensus 77 rHPnIlkv~d~~e~e~~d-------------------~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~Q 136 (771)
+||||+.+...|.++-+. |-+.+.++|+||.++ .+|..+|-.+...... -..++.|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~tLr~yl~~~~~s~r~----~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQTLREYLWTRHRSYRT----GRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhhHHHHHhcCCCchHH----HHHHHHH
Confidence 699999999888653321 113467999999999 6899998776543221 2233899
Q ss_pred HHHHHHHHHcCCCceecCCCCCCEEEcCC----CcEEEEccCcccccCCCCCCCCCCcccc-ccccCC-CCCChhccccc
Q 004157 137 IAKAVSFLNNDCKLVHGNVCLSSVVVTQT----LDWKLHAFDVLSEFDGNNEAANGPMLQY-AWLVGA-QYKPVELAKSD 210 (771)
Q Consensus 137 I~~aL~fLH~~~~ivH~dIkp~NI~v~~~----G~~KL~dFgla~~~~~~~~~~~~~~~~~-~~~~~~-~Y~aPE~~~~~ 210 (771)
+++|+.|||. .|+.|||+|.+||++.-+ -...++|||+|---+.- .-.-++... -..+|. ..||||+...-
T Consensus 350 lLEav~hL~~-hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~h--Glqlpy~S~~Vd~GGNa~lmAPEi~ta~ 426 (598)
T KOG4158|consen 350 LLEAVTHLHK-HGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNH--GLQLPYESDEVDLGGNAKLMAPEIATAV 426 (598)
T ss_pred HHHHHHHHHH-ccchhhcccccceEEEecCCCCcEEEEcccceeeecccc--ccccccccccccCCCcceecchhhhhcC
Confidence 9999999996 999999999999999533 23789999998533221 111122221 123343 67999997531
Q ss_pred cccccCCCCCcchHHHHHHHHHHHhhCCCCCChh----------hhhcc----CCCCcchHHHHHHHhccCCCCCCChH
Q 004157 211 WTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----------ELRNT----ASIPKSLLPDYQRLLSSMPSRRLNSS 275 (771)
Q Consensus 211 ~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~----------~l~~~----~~IP~~l~~~i~~lL~~~P~~Rps~~ 275 (771)
-.....-.-.++|.|+.|.|.||+|....||-.. +..++ ..+|..+++++..+|+.+|++|+++.
T Consensus 427 PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~ 505 (598)
T KOG4158|consen 427 PGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPN 505 (598)
T ss_pred CCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCCCCcccCChHHHHHHHHHhcCCccccCCcc
Confidence 0000001124799999999999999988776331 11122 45777889999999999999999964
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=3e-14 Score=145.35 Aligned_cols=135 Identities=12% Similarity=0.112 Sum_probs=101.4
Q ss_pred cCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-----CCCCeeEEeeeEEecccCcCC
Q 004157 24 GDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-----RHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 24 ~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-----rHPnIlkv~d~~e~e~~d~~~ 97 (771)
.+.||.|+ | .||. ++.++.. +||++..... ...+.+++|++.++.| .||||++++++++++.+.
T Consensus 7 ~~~LG~G~~~--~Vy~--hp~~~~k-~IKv~~~~~~--~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~--- 76 (210)
T PRK10345 7 QSPLGTGRHR--KCYA--HPEDAQR-CIKIVYHRGD--GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGT--- 76 (210)
T ss_pred cceecCCCce--EEEE--CCCCcCe-EEEEEecccc--chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCC---
Confidence 45789998 7 8995 6777766 5999876432 2345689999999999 579999999999986432
Q ss_pred cccEEEEEecCC----cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHH-HHHHcCCCceecCCCCCCEEEcCC----CcE
Q 004157 98 TKITIYIVTEPV----MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAV-SFLNNDCKLVHGNVCLSSVVVTQT----LDW 168 (771)
Q Consensus 98 ~~~~iyIVtE~v----~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL-~fLH~~~~ivH~dIkp~NI~v~~~----G~~ 168 (771)
+..+.+|+||+ ++|.+++++..+. .. . ..+.|++.++ +|||+ .+|+||||||+||+++.. +.+
T Consensus 77 -g~v~~~I~e~~G~~~~tL~~~l~~~~~~----e~-~-~~~~~~L~~l~~yLh~-~~IvhrDlKp~NILl~~~~~~~~~~ 148 (210)
T PRK10345 77 -GYVYDVIADFDGKPSITLTEFAEQCRYE----ED-V-AQLRQLLKKLKRYLLD-NRIVTMELKPQNILCQRISESEVIP 148 (210)
T ss_pred -eEEEEEEecCCCCcchhHHHHHHccccc----Hh-H-HHHHHHHHHHHHHHHH-CCEeecCCCHHHEEEeccCCCCCcE
Confidence 12234899995 3799999764321 11 1 2278888888 89996 999999999999999743 379
Q ss_pred EEEccCcc
Q 004157 169 KLHAFDVL 176 (771)
Q Consensus 169 KL~dFgla 176 (771)
+|+||+-+
T Consensus 149 ~LiDg~G~ 156 (210)
T PRK10345 149 VVCDNIGE 156 (210)
T ss_pred EEEECCCC
Confidence 99995544
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.6e-14 Score=143.93 Aligned_cols=191 Identities=12% Similarity=0.039 Sum_probs=129.4
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc--hhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ--DGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDA 95 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~--~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d~ 95 (771)
++.+...++.|. | +||.+.. .+.+|+.+.+.....- .-....+++|+++|++|. |++|.+++++.
T Consensus 3 ~~~~~~~l~~~~f~--~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~------- 71 (218)
T PRK12274 3 PPAVNEPLKSDTFG--RILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWD------- 71 (218)
T ss_pred CcccceeecCCCcc--eEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEc-------
Confidence 455677888887 8 9997765 6888888887653221 111236889999999996 57899998852
Q ss_pred CCcccEEEEEecCC-c-chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCC-CCCCEEEcCCCcEEEEc
Q 004157 96 TSTKITIYIVTEPV-M-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNV-CLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 96 ~~~~~~iyIVtE~v-~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dI-kp~NI~v~~~G~~KL~d 172 (771)
..|++|||+ + +|...+... .. ..+.|++.+|.+||. .|++|||| ||+||+++.+|.++|+|
T Consensus 72 -----~~~lvmeyI~G~~L~~~~~~~------~~----~~~~qi~~~L~~lH~-~GIvHrDL~kp~NILv~~~g~i~LID 135 (218)
T PRK12274 72 -----GRHLDRSYLAGAAMYQRPPRG------DL----AYFRAARRLLQQLHR-CGVAHNDLAKEANWLVQEDGSPAVID 135 (218)
T ss_pred -----CEEEEEeeecCccHHhhhhhh------hH----HHHHHHHHHHHHHHH-CcCccCCCCCcceEEEcCCCCEEEEE
Confidence 359999998 3 565433211 11 237899999999996 99999999 79999999999999999
Q ss_pred cCcccccCCCCCC----CCC---CccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCC
Q 004157 173 FDVLSEFDGNNEA----ANG---PMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLS 241 (771)
Q Consensus 173 Fgla~~~~~~~~~----~~~---~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~ 241 (771)
||++......... ... .+..+-......|+.|+...-- ....-...+.++.|+-+|.+++++-++
T Consensus 136 FG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l----~~~~~~~~~w~~~g~~~~~~~~~~~~~ 207 (218)
T PRK12274 136 FQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVL----KRTSWIRELWFATGKPVYRFVTRRVLH 207 (218)
T ss_pred CCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhh----ccchhHHHHHHHhcchHHHHHhccCCc
Confidence 9999855432110 000 0001111123456666654321 111114678899999999999988654
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.9e-14 Score=149.85 Aligned_cols=145 Identities=12% Similarity=0.009 Sum_probs=104.8
Q ss_pred CceecCCCCCCC-CceEEEEeE-ECCCCCcEEEEEEeCCCCch----------------------hHHHHHHHHHHHHhc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGT-SKDDGSPVSIFSISGTNAQD----------------------GHLAAARNGVKRLRT 75 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~-~k~~g~~VaIK~~~~~~~~~----------------------~~~~~~~~ei~~Lk~ 75 (771)
-|.+.+.||.|+ | .||.|+ +..+|+.|+||++....... .....+++|++.+++
T Consensus 29 ~~~i~~~Lg~G~~g--~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~ 106 (237)
T smart00090 29 LSAIGGCISTGKEA--NVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQR 106 (237)
T ss_pred hHHhCCeeccCcce--eEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 389999999998 8 999999 66789999999998543110 012346789999999
Q ss_pred CCCCCeeEEeeeEEecccCcCCcccEEEEEecCCc--chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCC-cee
Q 004157 76 VRHPNILAFLHSTEVENIDATSTKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCK-LVH 152 (771)
Q Consensus 76 LrHPnIlkv~d~~e~e~~d~~~~~~~iyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~-ivH 152 (771)
|.+. ++.+...+... ..||||||+. +|...+..... .....+..++.||+.+|.+||. .+ ++|
T Consensus 107 L~~~-~i~~p~~~~~~---------~~~lV~E~~~g~~L~~~~~~~~~---~~~~~~~~i~~qi~~~l~~LH~-~g~iiH 172 (237)
T smart00090 107 LYEA-GVPVPKPIAWR---------RNVLVMEFIGGDGLPAPRLKDVE---PEEEEEFELYDDILEEMRKLYK-EGELVH 172 (237)
T ss_pred HHhc-CCCCCeeeEec---------CceEEEEEecCCcccccccccCC---cchHHHHHHHHHHHHHHHHHHh-cCCEEe
Confidence 9763 33333333321 2489999994 35443322111 1122234558999999999996 88 999
Q ss_pred cCCCCCCEEEcCCCcEEEEccCcccccCC
Q 004157 153 GNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (771)
Q Consensus 153 ~dIkp~NI~v~~~G~~KL~dFgla~~~~~ 181 (771)
|||||+||+++ ++.++|+|||.+.....
T Consensus 173 ~Dikp~NIli~-~~~i~LiDFg~a~~~~~ 200 (237)
T smart00090 173 GDLSEYNILVH-DGKVVIIDVSQSVELDH 200 (237)
T ss_pred CCCChhhEEEE-CCCEEEEEChhhhccCC
Confidence 99999999999 88999999999875543
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.50 E-value=9.1e-15 Score=160.87 Aligned_cols=167 Identities=19% Similarity=0.241 Sum_probs=123.2
Q ss_pred cEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 100 ITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 100 ~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
.++||.|+.| ..|.++|..+........-.++..+.|++.++.| .+.+|+|+||.|||...++..||+|||+.+
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y----k~~ihrdlkp~nif~~~d~q~kIgDFgl~t 404 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY----KGLIHRDLKPSNIFFSDDDQLKIGDFGLVT 404 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh----ccchhhhccccccccccchhhhhhhhhhee
Confidence 3789999999 5799999876654444444456669999999999 689999999999999999999999999998
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhC--CCCCChhhhhc--cCCCC
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG--MRLSKTEELRN--TASIP 253 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g--~~p~~~~~l~~--~~~IP 253 (771)
............-....++++..||+||.+.+ +.|+.++|||+||+|++|++.. ........+.. -..||
T Consensus 405 s~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g------~~y~~kvdIyaLGlil~EL~~~f~T~~er~~t~~d~r~g~ip 478 (516)
T KOG1033|consen 405 SQDKDETVAPAAASHTQQVGTLLYMSPEQIRG------QQYSEKVDIYALGLILAELLIQFSTQFERIATLTDIRDGIIP 478 (516)
T ss_pred ecccCCcccchhhhhhhcccccccCCHHHHhh------hhhhhhcchhhHHHHHHHHHHHhccHHHHHHhhhhhhcCCCC
Confidence 87764311111112345667779999999998 5888999999999999999972 11111111111 13455
Q ss_pred cc-------hHHHHHHHhccCCCCCCChHH
Q 004157 254 KS-------LLPDYQRLLSSMPSRRLNSSK 276 (771)
Q Consensus 254 ~~-------l~~~i~~lL~~~P~~Rps~~~ 276 (771)
+. -..++++|+.+.|.+||++..
T Consensus 479 ~~~~~d~p~e~~ll~~lls~~p~~RP~~~~ 508 (516)
T KOG1033|consen 479 PEFLQDYPEEYTLLQQLLSPSPEERPSAIE 508 (516)
T ss_pred hHHhhcCcHHHHHHHHhcCCCcccCchHHH
Confidence 32 236788999999999995543
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.50 E-value=3e-15 Score=167.49 Aligned_cols=222 Identities=16% Similarity=0.243 Sum_probs=164.8
Q ss_pred ECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccCcCCcccEEEEEecCCc--chHHHHH
Q 004157 41 SKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDATSTKITIYIVTEPVM--PLSEKIK 117 (771)
Q Consensus 41 ~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d~~~~~~~iyIVtE~v~--~L~~~L~ 117 (771)
..+.|.-+++|+..+..........-+.|-.++...+ ||.+++....++.+. ..|++.+++. .|...+.
T Consensus 18 g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~--------kl~l~ld~~rgg~lft~l~ 89 (612)
T KOG0603|consen 18 GADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDG--------KLYLILDFLRGGDLFTRLS 89 (612)
T ss_pred cccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeecccc--------chhHhhhhcccchhhhccc
Confidence 3455777888887765333222234556778888887 999999999999854 7899999993 5666655
Q ss_pred HhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCcccccccc
Q 004157 118 ELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLV 197 (771)
Q Consensus 118 ~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~ 197 (771)
.... ......+..+..++-++.++|. .+++|+|+|++||+++.+|.+|+.|||+.+..-.... .++
T Consensus 90 ~~~~---f~~~~~~~~~aelaLald~lh~-l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~----------~cg 155 (612)
T KOG0603|consen 90 KEVM---FDELDVAFYLAELALALDHLHK-LGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI----------ACG 155 (612)
T ss_pred cCCc---hHHHHHHHHHHHHHHHHhhcch-hHHHHhcccccceeecccCccccCCchhhhHhHhhhh----------ccc
Confidence 5433 2233456668999999999995 9999999999999999999999999999887654211 133
Q ss_pred CCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhcc----CCCCc----chHHHHHHHhccCCC
Q 004157 198 GAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT----ASIPK----SLLPDYQRLLSSMPS 269 (771)
Q Consensus 198 ~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~~----~~IP~----~l~~~i~~lL~~~P~ 269 (771)
+..||+||+.++ ...++|.||||++++++++|..+|..+..+.+ ..+|. ..+.++.+|+..+|.
T Consensus 156 t~eymApEI~~g--------h~~a~D~ws~gvl~felltg~~pf~~~~~~~Il~~~~~~p~~l~~~a~~~~~~l~~r~p~ 227 (612)
T KOG0603|consen 156 TYEYRAPEIING--------HLSAADWWSFGVLAFELLTGTLPFGGDTMKRILKAELEMPRELSAEARSLFRQLFKRNPE 227 (612)
T ss_pred chhhhhhHhhhc--------cCCcccchhhhhhHHHHhhCCCCCchHHHHHHhhhccCCchhhhHHHHHHHHHHHhhCHH
Confidence 458999999873 34689999999999999999999988655443 23444 455667788889999
Q ss_pred CCCCh-----HHHhhCCCCCcchhhhhhh
Q 004157 270 RRLNS-----SKLIENSEYFQNKLVDTIH 293 (771)
Q Consensus 270 ~Rps~-----~~lL~~~~fF~n~lv~~~~ 293 (771)
.|.-. .++.+| .||+......+.
T Consensus 228 nrLg~~~~~~~eik~h-~f~~~i~~~~l~ 255 (612)
T KOG0603|consen 228 NRLGAGPDGVDEIKQH-EFFQSIDWNELE 255 (612)
T ss_pred HHhccCcchhHHHhcc-chheeeeHhhHh
Confidence 99864 455555 788765554333
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.49 E-value=3e-14 Score=143.98 Aligned_cols=225 Identities=15% Similarity=0.165 Sum_probs=156.1
Q ss_pred eecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCccc
Q 004157 22 NIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKI 100 (771)
Q Consensus 22 ~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~ 100 (771)
.+..++.... | .+|+|++. |..+.+|++............+..|+-.|+.+.||||+.++..+.. +.
T Consensus 193 nl~tkl~e~hsg--elwrgrwq--gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacns--------pp 260 (448)
T KOG0195|consen 193 NLITKLAESHSG--ELWRGRWQ--GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNS--------PP 260 (448)
T ss_pred hhhhhhccCCCc--cccccccc--CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccC--------CC
Confidence 3344555444 6 78888875 6677788877654444455668889999999999999999999976 34
Q ss_pred EEEEEecCC--cchHHHHHHhCC---CCCCcHHHHHHHHHHHHHHHHHHHcCCCceec-CCCCCCEEEcCCCcEEEE--c
Q 004157 101 TIYIVTEPV--MPLSEKIKELGL---EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHG-NVCLSSVVVTQTLDWKLH--A 172 (771)
Q Consensus 101 ~iyIVtE~v--~~L~~~L~~~~~---~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~-dIkp~NI~v~~~G~~KL~--d 172 (771)
++.+++.|+ ++|+.+|.+... ...+... ....|+.|+.|||+-..++-+ .|+...|+|+++-..+|. |
T Consensus 261 nlv~isq~mp~gslynvlhe~t~vvvd~sqav~----faldiargmaflhslep~ipr~~lns~hvmidedltarismad 336 (448)
T KOG0195|consen 261 NLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVR----FALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMAD 336 (448)
T ss_pred CceEeeeeccchHHHHHHhcCccEEEecchHHH----HHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheeccc
Confidence 889999999 789999987542 2222222 278999999999984444443 688899999998776654 2
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc----
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN---- 248 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~---- 248 (771)
--++.+ . .+....+.|++||.+...-. ...-.++|+|||++|+||+.+...||..-...+
T Consensus 337 ~kfsfq--e-----------~gr~y~pawmspealqrkpe---d~n~raadmwsfaillwel~trevpfadlspmecgmk 400 (448)
T KOG0195|consen 337 TKFSFQ--E-----------VGRAYSPAWMSPEALQRKPE---DLNIRAADMWSFAILLWELNTREVPFADLSPMECGMK 400 (448)
T ss_pred ceeeee--c-----------cccccCcccCCHHHHhcCch---hcchhhhhHHHHHHHHHHhhccccccccCCchhhhhh
Confidence 222211 1 11122347899998865311 122358999999999999999988875322111
Q ss_pred ------cCCCC----cchHHHHHHHhccCCCCCCChHHHh
Q 004157 249 ------TASIP----KSLLPDYQRLLSSMPSRRLNSSKLI 278 (771)
Q Consensus 249 ------~~~IP----~~l~~~i~~lL~~~P~~Rps~~~lL 278 (771)
...|| ..+..++.-|++.||.+||.++.++
T Consensus 401 ialeglrv~ippgis~hm~klm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 401 IALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred hhhccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence 12344 4566677789999999999987654
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.45 E-value=4.2e-13 Score=135.91 Aligned_cols=137 Identities=12% Similarity=0.074 Sum_probs=102.9
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch--------------------hHHHHHHHHHHHHhcCCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD--------------------GHLAAARNGVKRLRTVRH 78 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~--------------------~~~~~~~~ei~~Lk~LrH 78 (771)
-|.+.+.|+.|. | .||+|..+ +|+.|+||++....... .....+.+|+..+..+.|
T Consensus 16 ~~~~~~~i~~G~~g--~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~ 92 (198)
T cd05144 16 VESLGNQIGVGKES--DVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYE 92 (198)
T ss_pred hhhcCCccccCcce--EEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHH
Confidence 388999999998 7 99999875 79999999987542110 011236789999999988
Q ss_pred CC--eeEEeeeEEecccCcCCcccEEEEEecCCc--chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecC
Q 004157 79 PN--ILAFLHSTEVENIDATSTKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGN 154 (771)
Q Consensus 79 Pn--Ilkv~d~~e~e~~d~~~~~~~iyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~d 154 (771)
++ +..+++. ...|+||||+. +|...... .. ....+.+|+.++.++|+ .+++|||
T Consensus 93 ~~i~v~~~~~~------------~~~~lv~e~~~g~~L~~~~~~-----~~----~~~~~~~i~~~l~~lh~-~gi~H~D 150 (198)
T cd05144 93 EGFPVPKPIDW------------NRHAVVMEYIDGVELYRVRVL-----ED----PEEVLDEILEEIVKAYK-HGIIHGD 150 (198)
T ss_pred cCCCCCceeec------------CCceEEEEEeCCcchhhcccc-----cc----HHHHHHHHHHHHHHHHH-CCCCcCC
Confidence 74 4444431 13589999993 56543221 11 22338899999999996 8999999
Q ss_pred CCCCCEEEcCCCcEEEEccCcccccCC
Q 004157 155 VCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (771)
Q Consensus 155 Ikp~NI~v~~~G~~KL~dFgla~~~~~ 181 (771)
|+|+||++++++.++|+|||.+.....
T Consensus 151 l~p~Nill~~~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 151 LSEFNILVDDDEKIYIIDWPQMVSTDH 177 (198)
T ss_pred CCcccEEEcCCCcEEEEECCccccCCC
Confidence 999999999999999999999976654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.4e-13 Score=161.09 Aligned_cols=236 Identities=18% Similarity=0.252 Sum_probs=154.2
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
...|+..+.+..|. | .||..+++.+.+++++ ++++.+ -.++| |+.+.+.
T Consensus 82 e~df~~IklisngAyg--avylvrh~~trqrfa~-kiNkq~------lilRn------------ilt~a~n--------- 131 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYG--AVYLVRHKETRQRFAM-KINKQN------LILRN------------ILTFAGN--------- 131 (1205)
T ss_pred ccccceeEeeccCCCC--ceeeeeccccccchhh-cccccc------hhhhc------------cccccCC---------
Confidence 45789999999888 8 8999999999999999 444321 12333 2322211
Q ss_pred CcccEEEEEecCCcchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 97 STKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 97 ~~~~~iyIVtE~v~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
.+.| ++-...++..+... . +++.+++|||+ .+|+|||+||+|.+|+.-|.+||.|||+.
T Consensus 132 -----pfvv----gDc~tllk~~g~lP---v--------dmvla~Eylh~-ygivhrdlkpdnllIT~mGhiKlTDfgLs 190 (1205)
T KOG0606|consen 132 -----PFVV----GDCATLLKNIGPLP---V--------DMVLAVEYLHS-YGIVHRDLKPDNLLITSMGHIKLTDFGLS 190 (1205)
T ss_pred -----ccee----chhhhhcccCCCCc---c--------hhhHHhHhhcc-CCeecCCCCCCcceeeecccccccchhhh
Confidence 1222 22223333322211 1 22779999997 99999999999999999999999999997
Q ss_pred cccCCCCC--CCCCCc------ccccc-ccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-
Q 004157 177 SEFDGNNE--AANGPM------LQYAW-LVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL- 246 (771)
Q Consensus 177 ~~~~~~~~--~~~~~~------~~~~~-~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l- 246 (771)
..--.... ...+.+ +.... +++..|.|||++.. ++|+..+|.|++|+++||.+-|..+|..+..
T Consensus 191 k~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilr------qgygkpvdwwamGiIlyeFLVgcvpffGdtpe 264 (1205)
T KOG0606|consen 191 KKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILR------QGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE 264 (1205)
T ss_pred hhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhh------hccCCCccHHHHHHHHHHHheeeeeccCCCHH
Confidence 53211100 000000 11112 33458999999875 6899999999999999999999987755421
Q ss_pred --------------hccCCCCcchHHHHHHHhccCCCCCCChH---HHhhCCCCCcchhhh-hh-hhhhhhccCChhhHH
Q 004157 247 --------------RNTASIPKSLLPDYQRLLSSMPSRRLNSS---KLIENSEYFQNKLVD-TI-HFMEILNLKDSVEKD 307 (771)
Q Consensus 247 --------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~---~lL~~~~fF~n~lv~-~~-~~L~~l~~k~~~eK~ 307 (771)
.....+|.+..+++.+||..+|..|.-.. ++.+ .+||+..... .+ +.++-..+++.++..
T Consensus 265 elfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~-h~ff~~LDw~~llRqkaefvpql~~eddt 343 (1205)
T KOG0606|consen 265 ELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQ-HGFFQLLDWKSLLRQKAEFVPQLESEDDT 343 (1205)
T ss_pred HHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhcccchhhhhhh-ccceeecccchhhhhhccccccccccccc
Confidence 12356788999999999999999998532 3333 4787653322 11 123334555566666
Q ss_pred hhhh
Q 004157 308 TFFR 311 (771)
Q Consensus 308 ~F~~ 311 (771)
.||.
T Consensus 344 syfd 347 (1205)
T KOG0606|consen 344 SYFD 347 (1205)
T ss_pred hhhc
Confidence 6664
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.1e-12 Score=133.67 Aligned_cols=133 Identities=15% Similarity=0.093 Sum_probs=102.8
Q ss_pred CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch------hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD------GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~------~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
+.||.|. | .||+|.. +|..|+||+........ .....+.+|++.++.++|++|.....++...
T Consensus 2 ~~l~~G~~~--~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~------ 71 (211)
T PRK14879 2 KLIKRGAEA--EIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDP------ 71 (211)
T ss_pred cccccCceE--EEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeC------
Confidence 4678887 8 8999987 68899999876432211 1234577899999999999876655555432
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
...|+||||+ .+|.+.+..... .....+.+++.+|.+||+ .+++|||++|.||+++ ++.++|+|||+
T Consensus 72 --~~~~lv~e~~~G~~L~~~~~~~~~-------~~~~i~~~i~~~l~~lH~-~~i~H~Dl~p~Nil~~-~~~~~liDf~~ 140 (211)
T PRK14879 72 --ENFIIVMEYIEGEPLKDLINSNGM-------EELELSREIGRLVGKLHS-AGIIHGDLTTSNMILS-GGKIYLIDFGL 140 (211)
T ss_pred --CCCEEEEEEeCCcCHHHHHHhccH-------HHHHHHHHHHHHHHHHHh-CCcccCCCCcccEEEE-CCCEEEEECCc
Confidence 2569999999 368888765321 234458999999999996 8999999999999999 88999999998
Q ss_pred ccc
Q 004157 176 LSE 178 (771)
Q Consensus 176 a~~ 178 (771)
+..
T Consensus 141 a~~ 143 (211)
T PRK14879 141 AEF 143 (211)
T ss_pred ccC
Confidence 764
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.43 E-value=7.1e-13 Score=158.16 Aligned_cols=192 Identities=14% Similarity=0.201 Sum_probs=141.3
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC---CCCeeEEeeeEEeccc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR---HPNILAFLHSTEVENI 93 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr---HPnIlkv~d~~e~e~~ 93 (771)
+-.|.|.+.+|.|+ | +||.|+..+ |+.||+|+-...+.-+-++ ..+++.+|+ -|.|..+...+...+
T Consensus 697 ~~~~~I~~e~G~g~y~--~vy~a~~~~-~~~~alK~e~P~~~WEfYI-----~~q~~~RLk~~~~~~~~~~~~a~~~~~- 767 (974)
T KOG1166|consen 697 GEKFCISKEIGEGSYG--SVYVATHSN-GKLVALKVEKPPNPWEFYI-----CLQVMERLKPQMLPSIMHISSAHVFQN- 767 (974)
T ss_pred ceeEEEEeeeccccce--EEEEeecCC-CcEEEEEeecCCCceeeee-----hHHHHHhhchhhhcchHHHHHHHccCC-
Confidence 44699999999997 7 999999886 9999999977655544211 122333333 456666666655432
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC-------
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ------- 164 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~------- 164 (771)
.-++|+||. |+|.+++...+. .....+..+..|++.-+..||. ++||||||||+|.++..
T Consensus 768 -------~S~lv~ey~~~Gtlld~~N~~~~---m~e~lv~~~~~qml~ive~lH~-~~IIHgDiKPDNfll~~~~~~~~~ 836 (974)
T KOG1166|consen 768 -------ASVLVSEYSPYGTLLDLINTNKV---MDEYLVMFFSCQMLRIVEHLHA-MGIIHGDIKPDNFLLRREICADSD 836 (974)
T ss_pred -------cceeeeeccccccHHHhhccCCC---CCchhhhHHHHHHHHHHHHHHh-cceecccCCcceeEeecccCCCCc
Confidence 458999998 899999884432 2233455669999999999995 99999999999999953
Q ss_pred CCcEEEEccCcccccCCCCCCCCCCccccc-cccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCC
Q 004157 165 TLDWKLHAFDVLSEFDGNNEAANGPMLQYA-WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL 240 (771)
Q Consensus 165 ~G~~KL~dFgla~~~~~~~~~~~~~~~~~~-~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p 240 (771)
.-.++|+|||.+..+.-.... ..+. ...+..+..+|+..| +.+++.+|.|+|+-++|-|+.|...
T Consensus 837 ~~~l~lIDfG~siDm~lfp~~-----~~F~~~~~td~f~C~EM~~g------rpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 837 SKGLYLIDFGRSIDMKLFPDG-----TKFKAVWHTDLFDCIEMREG------RPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred ccceEEEecccceeeeEcCCC-----cEEeeeeccccchhHHHhcC------CCCchhhhhHHHHHHHHHHHHHHHH
Confidence 234999999999877543211 1222 233457889999887 5788999999999999999998754
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.42 E-value=7.6e-13 Score=148.36 Aligned_cols=193 Identities=17% Similarity=0.224 Sum_probs=140.4
Q ss_pred HhcCCCCCeeEEeeeEEecccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCc
Q 004157 73 LRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKL 150 (771)
Q Consensus 73 Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~i 150 (771)
|+.+.|.|+.++++.+.+. ..+++|.+|| ++|.+.+......- ...+....++.|+.||.|||+..-.
T Consensus 1 l~~l~h~n~~~f~g~~~~~--------~~~~~i~~~c~rGsl~D~i~~~~~~~--d~~F~~s~~rdi~~Gl~ylh~s~i~ 70 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDG--------PEMIVIWEYCSRGSLLDILSNEDIKL--DYFFILSFIRDISKGLAYLHNSPIG 70 (484)
T ss_pred CcccchhhhhhheeeEecC--------CceEEEEeeecCccHHhHHhccccCc--cHHHHHHHHHHHHHHHHHHhcCcce
Confidence 5788999999999999874 4889999999 78999998744321 1222334489999999999985555
Q ss_pred eecCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhcccccccc-ccCCCCCcchHHHHHH
Q 004157 151 VHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTA-VRKSPPWSIDSWGLGC 229 (771)
Q Consensus 151 vH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~-~~~~~~~~~Di~SLG~ 229 (771)
.||+++..|.+++..-.+||.|||+......... ...........-|.|||.+.+.-.. .....+.+.|+||+|+
T Consensus 71 ~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~----~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~i 146 (484)
T KOG1023|consen 71 YHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAE----PEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGI 146 (484)
T ss_pred eeeeeccccceeeeeEEEEechhhhccccccccc----ccccchhHHHHhccCHHHhcccccccccccccccCCeehHHH
Confidence 9999999999999999999999999876643100 0000011112368999998863111 1112456899999999
Q ss_pred HHHHHhhCCCCCChhh-----------hhc------------cCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 230 LIYELFSGMRLSKTEE-----------LRN------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 230 li~el~~g~~p~~~~~-----------l~~------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
++||+++...+|.... ++. ...++..+..++++|+..+|..||++.++-.
T Consensus 147 i~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~ 219 (484)
T KOG1023|consen 147 IMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRS 219 (484)
T ss_pred HHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHh
Confidence 9999999887764311 011 1145567888899999999999999988754
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.5e-12 Score=131.52 Aligned_cols=129 Identities=19% Similarity=0.130 Sum_probs=96.8
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch------hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcc
Q 004157 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD------GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (771)
Q Consensus 27 ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~------~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~ 99 (771)
||.|. | +||+|.. +|..|+||++....... .....+.+|++.++.++|+++....-....+
T Consensus 2 ig~G~~~--~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~-------- 69 (199)
T TIGR03724 2 IAKGAEA--IIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDP-------- 69 (199)
T ss_pred CCCCceE--EEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC--------
Confidence 56776 6 9999984 57899999976432211 1235678899999999988654333222222
Q ss_pred cEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 100 ITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 100 ~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
...|+||||+ .+|.+.+..... ..+.|++.+|.+||+ .+++|||++|.||+++ ++.+++.|||++.
T Consensus 70 ~~~~lv~e~~~g~~l~~~~~~~~~----------~~~~~i~~~l~~lH~-~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~ 137 (199)
T TIGR03724 70 DNKTIVMEYIEGKPLKDVIEEGND----------ELLREIGRLVGKLHK-AGIVHGDLTTSNIIVR-DDKLYLIDFGLGK 137 (199)
T ss_pred CCCEEEEEEECCccHHHHHhhcHH----------HHHHHHHHHHHHHHH-CCeecCCCCcceEEEE-CCcEEEEECCCCc
Confidence 2569999999 468777654311 338999999999996 8999999999999999 8999999999876
Q ss_pred cc
Q 004157 178 EF 179 (771)
Q Consensus 178 ~~ 179 (771)
..
T Consensus 138 ~~ 139 (199)
T TIGR03724 138 YS 139 (199)
T ss_pred CC
Confidence 53
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.35 E-value=4e-12 Score=127.04 Aligned_cols=138 Identities=17% Similarity=0.182 Sum_probs=95.7
Q ss_pred ecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhH-H---------------------HHHHHHHHHHhcCCCC
Q 004157 23 IGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGH-L---------------------AAARNGVKRLRTVRHP 79 (771)
Q Consensus 23 i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~-~---------------------~~~~~ei~~Lk~LrHP 79 (771)
+++.||.|+ | +||.|.+. +|+.|+||++......... . .....|++.+.++++.
T Consensus 1 ~~~~lg~G~~g--~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~ 77 (187)
T cd05119 1 VGGPIGTGKEA--DVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEA 77 (187)
T ss_pred CCcccccccce--eEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHc
Confidence 356788888 8 99999987 8999999998754321111 1 1124667777777654
Q ss_pred C--eeEEeeeEEecccCcCCcccEEEEEecCCcc--h-HHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecC
Q 004157 80 N--ILAFLHSTEVENIDATSTKITIYIVTEPVMP--L-SEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGN 154 (771)
Q Consensus 80 n--Ilkv~d~~e~e~~d~~~~~~~iyIVtE~v~~--L-~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~d 154 (771)
+ +.+++... ..|+||||+.. + ...+...... .....++.+++.++.++|...+++|||
T Consensus 78 ~~~~~~~~~~~------------~~~lv~e~~~g~~~~~~~l~~~~~~-----~~~~~~~~~~~~~l~~lh~~~~ivH~D 140 (187)
T cd05119 78 GVPVPKPIDLN------------RHVLVMEFIGGDGIPAPRLKDVRLL-----EDPEELYDQILELMRKLYREAGLVHGD 140 (187)
T ss_pred CCCCCceEecC------------CCEEEEEEeCCCCccChhhhhhhhc-----ccHHHHHHHHHHHHHHHhhccCcCcCC
Confidence 3 44444321 34999999932 1 1222222111 123445899999999999658999999
Q ss_pred CCCCCEEEcCCCcEEEEccCcccccCC
Q 004157 155 VCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (771)
Q Consensus 155 Ikp~NI~v~~~G~~KL~dFgla~~~~~ 181 (771)
|||+||+++ ++..+|+|||.+.....
T Consensus 141 l~p~Nili~-~~~~~liDfg~a~~~~~ 166 (187)
T cd05119 141 LSEYNILVD-DGKVYIIDVPQAVEIDH 166 (187)
T ss_pred CChhhEEEE-CCcEEEEECcccccccC
Confidence 999999999 99999999999977654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.34 E-value=6.7e-12 Score=146.38 Aligned_cols=134 Identities=14% Similarity=0.062 Sum_probs=101.6
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc------hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ------DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~------~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
|...+.||.|. | +||+|... +..+++|+...+... ....+.+.+|++.++.++|++|+..+.+...+
T Consensus 335 ~~~~~~iG~G~~g--~Vy~~~~~--~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~-- 408 (535)
T PRK09605 335 KIPDHLIGKGAEA--DIKKGEYL--GRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDP-- 408 (535)
T ss_pred cCccceeccCCcE--EEEEEeec--CccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeC--
Confidence 45567789988 8 99999864 445555554332111 12245678999999999999988776555442
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEE
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~ 171 (771)
...|+||||+ ++|.+++.. ....+.|++.+|.+||+ .+++||||||+||++ .++.++|+
T Consensus 409 ------~~~~lv~E~~~g~~L~~~l~~-----------~~~~~~~i~~~L~~lH~-~giiHrDlkp~NILl-~~~~~~li 469 (535)
T PRK09605 409 ------EEKTIVMEYIGGKDLKDVLEG-----------NPELVRKVGEIVAKLHK-AGIVHGDLTTSNFIV-RDDRLYLI 469 (535)
T ss_pred ------CCCEEEEEecCCCcHHHHHHH-----------HHHHHHHHHHHHHHHHh-CCCccCCCChHHEEE-ECCcEEEE
Confidence 2568999999 478887762 12338899999999996 899999999999999 67889999
Q ss_pred ccCccccc
Q 004157 172 AFDVLSEF 179 (771)
Q Consensus 172 dFgla~~~ 179 (771)
|||+++..
T Consensus 470 DFGla~~~ 477 (535)
T PRK09605 470 DFGLGKYS 477 (535)
T ss_pred eCcccccC
Confidence 99998764
|
|
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.33 E-value=8.1e-12 Score=130.44 Aligned_cols=130 Identities=12% Similarity=0.071 Sum_probs=94.6
Q ss_pred EEEEeEECCCCCcEEEEEEeCCCC-----c------hhHHHHHHHHHHHHhcCCCCCe--eEEeeeEEecccCcCCcccE
Q 004157 35 SHFQGTSKDDGSPVSIFSISGTNA-----Q------DGHLAAARNGVKRLRTVRHPNI--LAFLHSTEVENIDATSTKIT 101 (771)
Q Consensus 35 tVy~g~~k~~g~~VaIK~~~~~~~-----~------~~~~~~~~~ei~~Lk~LrHPnI--lkv~d~~e~e~~d~~~~~~~ 101 (771)
+||.+... +..++||.+..... . ......+.+|++.++.|+|++| ...+...+.+... ...
T Consensus 47 tv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~----~~~ 120 (239)
T PRK01723 47 TTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHGL----FYR 120 (239)
T ss_pred cEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecCc----cee
Confidence 66666543 78899999864221 1 1223567889999999999885 6777665443211 113
Q ss_pred EEEEecCCc---chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccc
Q 004157 102 IYIVTEPVM---PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (771)
Q Consensus 102 iyIVtE~v~---~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~ 178 (771)
.+||||++. +|.+++..... .... +.||+.+|.+||. +||+||||||.||+++.++.++|+|||.+..
T Consensus 121 ~~lV~e~l~G~~~L~~~l~~~~l----~~~~----~~~i~~~l~~lH~-~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~ 191 (239)
T PRK01723 121 ADILIERIEGARDLVALLQEAPL----SEEQ----WQAIGQLIARFHD-AGVYHADLNAHNILLDPDGKFWLIDFDRGEL 191 (239)
T ss_pred eeEEEEecCCCCCHHHHHhcCCC----CHHH----HHHHHHHHHHHHH-CCCCCCCCCchhEEEcCCCCEEEEECCCccc
Confidence 369999993 58777765321 2222 6799999999996 9999999999999999999999999998865
Q ss_pred c
Q 004157 179 F 179 (771)
Q Consensus 179 ~ 179 (771)
.
T Consensus 192 ~ 192 (239)
T PRK01723 192 R 192 (239)
T ss_pred C
Confidence 3
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.5e-11 Score=136.34 Aligned_cols=241 Identities=18% Similarity=0.125 Sum_probs=170.8
Q ss_pred CceecCCCCC--CCCceEEEEeEE--CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccC
Q 004157 20 PYNIGDPYPS--AWGSWSHFQGTS--KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENID 94 (771)
Q Consensus 20 ~Y~i~e~ig~--G~g~wtVy~g~~--k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d 94 (771)
.+.+...+|. |. -|.+|.+.. +.++..+++|.-+...........-.+|+...++++ |+|.++.+..++..
T Consensus 115 ~~~~~~~~g~~~g~-~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~--- 190 (524)
T KOG0601|consen 115 RFPISSRTGSLPGS-KGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGS--- 190 (524)
T ss_pred hcccccccccCCCC-CceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccC---
Confidence 4556667777 64 338999998 899999999985433221111222345777777776 99999988888863
Q ss_pred cCCcccEEEEEecCCc-chHHHHHHhCCCCCCcHHHHHHHHHHHHH----HHHHHHcCCCceecCCCCCCEEEcCC-CcE
Q 004157 95 ATSTKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAK----AVSFLNNDCKLVHGNVCLSSVVVTQT-LDW 168 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~----aL~fLH~~~~ivH~dIkp~NI~v~~~-G~~ 168 (771)
...||-||+|+ .|..+....... .....++-.+.+... ||..+|. ++++|.+++|.|||...+ ...
T Consensus 191 -----~~lfiqtE~~~~sl~~~~~~~~~~--~p~~~l~~~~~~~~~~~~~al~~~hs-~~~~~~~~kp~~i~~~~~~~s~ 262 (524)
T KOG0601|consen 191 -----GILFIQTELCGESLQSYCHTPCNF--LPDNLLWNSLRDWLSRDVTALSHLHS-NNIVHDDLKPANIFTTSDWTSC 262 (524)
T ss_pred -----CcceeeeccccchhHHhhhccccc--CCchhhhhHHhhhhhcccccccccCC-Ccccccccchhheeccccccee
Confidence 48899999995 577766554321 112224444777777 9999997 899999999999999999 899
Q ss_pred EEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh----
Q 004157 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE---- 244 (771)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~---- 244 (771)
+++||+++..+...+....... .+....+..|++||+.++ -++...|+|+||.++.+...+..+....
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~-~~r~~~~~~Y~~ke~~~~-------l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~ 334 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKV-SKRPEGDCIYAAKELLNG-------LATFASDIFSLGEVILEAILGSHLPSVGKNSS 334 (524)
T ss_pred ecCCcceeEEccCCccccceee-eecCCCCceEeChhhhcc-------ccchHhhhcchhhhhHhhHhhcccccCCCCCC
Confidence 9999999998876542211111 122244568999999886 4668999999999999988876543221
Q ss_pred --hhhc-------cCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 245 --ELRN-------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 245 --~l~~-------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
++++ +......+...+.+|+..++..|++...+..+
T Consensus 335 W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l 379 (524)
T KOG0601|consen 335 WSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTAL 379 (524)
T ss_pred ccccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence 1222 12333445667889999999999999877665
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.20 E-value=9.6e-11 Score=111.09 Aligned_cols=130 Identities=15% Similarity=0.061 Sum_probs=98.7
Q ss_pred ecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCC--CCeeEEeeeEEecccCcCCcc
Q 004157 23 IGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRH--PNILAFLHSTEVENIDATSTK 99 (771)
Q Consensus 23 i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrH--PnIlkv~d~~e~e~~d~~~~~ 99 (771)
+.+.++.|. + .||+++.. +..++||.+..... ...+.+|+..++.|+| +++.+++...+..
T Consensus 2 ~~~~i~~g~~~--~v~~~~~~--~~~~~iK~~~~~~~----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~-------- 65 (155)
T cd05120 2 SIKLLKGGLTN--RVYLLGTK--DEDYVLKINPSREK----GADREREVAILQLLARKGLPVPKVLASGESD-------- 65 (155)
T ss_pred cceeccccccc--ceEEEEec--CCeEEEEecCCCCc----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCC--------
Confidence 345678876 6 89999875 47899999865432 3457789999999986 4888888877653
Q ss_pred cEEEEEecCCc--chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcC--CCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 100 ITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNND--CKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 100 ~~iyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~--~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
...|+++||+. ++..+ ........+.+++.+|.+||.- .+++|||++|+||+++..+.++|.|||.
T Consensus 66 ~~~~~v~e~~~g~~~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~ 135 (155)
T cd05120 66 GWSYLLMEWIEGETLDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEY 135 (155)
T ss_pred CccEEEEEecCCeecccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEeccc
Confidence 36899999993 34322 1112233488999999999963 2699999999999999999999999998
Q ss_pred ccc
Q 004157 176 LSE 178 (771)
Q Consensus 176 a~~ 178 (771)
+..
T Consensus 136 ~~~ 138 (155)
T cd05120 136 AGY 138 (155)
T ss_pred ccC
Confidence 753
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.17 E-value=5.1e-12 Score=147.74 Aligned_cols=246 Identities=15% Similarity=0.151 Sum_probs=174.0
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECC-CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEeccc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKD-DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENI 93 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~-~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~ 93 (771)
+..+|.+.+.+|.|. + .+-...+.. ....++++.+............+..|..+-+.+. |+|++++++....
T Consensus 18 ~~~~~~~~~~ig~gs~~--~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~--- 92 (601)
T KOG0590|consen 18 PNSQYKLSRSIGKGSFS--SSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSS--- 92 (601)
T ss_pred ccccccccccccccccc--hhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCC---
Confidence 367899999999887 5 455554432 3345566665544323344556667888888887 9999999998876
Q ss_pred CcCCcccEEEEEecCC--cchHHHHH-Hh--CCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC-c
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIK-EL--GLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL-D 167 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~-~~--~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G-~ 167 (771)
....|+++|+. +.+...+. .. ...... ....+.|+..+|.|+|..+++.|+||+|+|.+++.+| .
T Consensus 93 -----~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~----~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~ 163 (601)
T KOG0590|consen 93 -----PRSYLLSLSYSDGGSLFSKISHPDSTGTSSSS----ASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSA 163 (601)
T ss_pred -----CcccccccCcccccccccccccCCccCCCCcc----hhhhhhhhccCccccCcccccccCCCCCccchhccCCCc
Confidence 34889999998 35666652 22 112222 2334999999999999338999999999999999999 9
Q ss_pred EEEEccCcccccCCCCCCCCCCcccccccc-CCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh
Q 004157 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLV-GAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL 246 (771)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~-~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l 246 (771)
.|+.|||+++.+...+.. ........+ ...|++||...+. .......|+||+|+++..++.|..++.....
T Consensus 164 l~~~df~~At~~~~~~g~---~~~~~~~~g~s~~y~a~E~~~~~-----~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~ 235 (601)
T KOG0590|consen 164 LKIADFGLATAYRNKNGA---ERSLKDRCGSSPPYGAPEHLSGK-----AYRGPSVDVWSLGIVLSAMLTGELPWDFPSR 235 (601)
T ss_pred ccCCCchhhccccccCCc---ceeeecccCCCCCCCCcccccch-----hhcCCCcccccccccccccccCCCCcccccc
Confidence 999999999887652111 111222233 5589999998762 2345689999999999999999876532211
Q ss_pred -----------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 247 -----------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 247 -----------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
.....+......++.+++..+|..|.+..++-.+.++-
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~ 290 (601)
T KOG0590|consen 236 KDGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLS 290 (601)
T ss_pred ccccceeecccccccccCccccCChhhhhcccccccCCchhcccccccccccccc
Confidence 11245666777888889999999999999987764433
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.04 E-value=3.8e-11 Score=125.00 Aligned_cols=205 Identities=16% Similarity=0.177 Sum_probs=133.3
Q ss_pred HHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEEEEecCC--cchHHHHHHhCCCC-CCcHHHHHHHHHHHHHHHH
Q 004157 66 ARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEG-SQRDEYYAWGLNQIAKAVS 142 (771)
Q Consensus 66 ~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~-~~~~~~i~~gl~QI~~aL~ 142 (771)
.+.-+..|-.|-|-||++++.++.+.... .+..+.++|||+ ++|..+|++..... ......+...+-||+.||.
T Consensus 114 ~~~vFdnllqlvHsnlvkfH~yw~d~K~~---e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~ 190 (458)
T KOG1266|consen 114 RRAVFDNLLQLVHSNLVKFHKYWTDKKYE---EKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALS 190 (458)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccccc---cccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhh
Confidence 34446777788899999999999764431 155789999999 67999998754322 1222334445999999999
Q ss_pred HHHcCC--CceecCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCcccccc---ccCCCCCChhccccccccccCC
Q 004157 143 FLNNDC--KLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAW---LVGAQYKPVELAKSDWTAVRKS 217 (771)
Q Consensus 143 fLH~~~--~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~---~~~~~Y~aPE~~~~~~~~~~~~ 217 (771)
|||+ | -++|+|+..+.||+..+|-+|++--......... ........ ..-..|.+||.-.. .+
T Consensus 191 yLhs-~~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~-----~~~~~~Ek~~~~~~~g~~a~~sg~~------tn 258 (458)
T KOG1266|consen 191 YLHS-CDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSV-----NSTREAEKSVNTSLPGFSAPESGTT------TN 258 (458)
T ss_pred hhhc-cCCccccCCcchhheeecCCceEEecccCccccchhh-----hhhhHhhhhccccCCccccCCcCcc------cc
Confidence 9997 6 6999999999999999999998743222111100 00000000 11236788886443 24
Q ss_pred CCCcchHHHHHHHHHHHhhCCCC-CChhh-------h-hccCCCCcch-HHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 218 PPWSIDSWGLGCLIYELFSGMRL-SKTEE-------L-RNTASIPKSL-LPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 218 ~~~~~Di~SLG~li~el~~g~~p-~~~~~-------l-~~~~~IP~~l-~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
..-++|||++|....+|--+..- ..++. . ..+..+...+ ...+.+|++..|..||++..++.|+-.|.
T Consensus 259 ~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~len~lqr~~i~kcl~~eP~~rp~ar~llfHpllfe 336 (458)
T KOG1266|consen 259 TTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIGLENGLQRGSITKCLEGEPNGRPDARLLLFHPLLFE 336 (458)
T ss_pred cccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheeeccCccccCcCcccccCCCCCCcchhhhhcCceeee
Confidence 45689999999888887665421 11110 0 0011111222 34567899999999999999999966554
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.9e-09 Score=108.50 Aligned_cols=136 Identities=12% Similarity=0.067 Sum_probs=93.1
Q ss_pred CCCCCCC-CceEEEEeEECC------CCCcEEEEEEeCCCC--------------------chhHHHHH----HHHHHHH
Q 004157 25 DPYPSAW-GSWSHFQGTSKD------DGSPVSIFSISGTNA--------------------QDGHLAAA----RNGVKRL 73 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~------~g~~VaIK~~~~~~~--------------------~~~~~~~~----~~ei~~L 73 (771)
..|+.|- + .||.|.... .+..||||++..... .......+ ++|++.|
T Consensus 3 g~i~~GKEa--~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L 80 (197)
T cd05146 3 GCISTGKES--VVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNL 80 (197)
T ss_pred CccccCcce--EEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHH
Confidence 4566676 7 899998653 357999999984210 00112233 4899999
Q ss_pred hcCCC--CCeeEEeeeEEecccCcCCcccEEEEEecCCcc--h-HHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHH-HcC
Q 004157 74 RTVRH--PNILAFLHSTEVENIDATSTKITIYIVTEPVMP--L-SEKIKELGLEGSQRDEYYAWGLNQIAKAVSFL-NND 147 (771)
Q Consensus 74 k~LrH--PnIlkv~d~~e~e~~d~~~~~~~iyIVtE~v~~--L-~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fL-H~~ 147 (771)
++|+. -++.+++++.. -+|||||++. + ...|+..... ...+...+.|++.+|..| |.
T Consensus 81 ~rl~~~Gv~vP~pi~~~~------------~~lvME~Ig~~~~~~~~Lkd~~~~----~~~~~~i~~~i~~~l~~l~H~- 143 (197)
T cd05146 81 KRMQKAGIPCPEVVVLKK------------HVLVMSFIGDDQVPAPKLKDAKLN----DEEMKNAYYQVLSMMKQLYKE- 143 (197)
T ss_pred HHHHHcCCCCCeEEEecC------------CEEEEEEcCCCCccchhhhccccC----HHHHHHHHHHHHHHHHHHHHh-
Confidence 99963 45666666422 3899999953 2 1223332211 122334478999999999 75
Q ss_pred CCceecCCCCCCEEEcCCCcEEEEccCcccccC
Q 004157 148 CKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (771)
Q Consensus 148 ~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~ 180 (771)
+++|||||++.||++. +|.+.|+|||.+....
T Consensus 144 ~glVHGDLs~~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 144 CNLVHADLSEYNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred CCeecCCCCHHHEEEE-CCcEEEEECCCceeCC
Confidence 9999999999999996 5789999999887664
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=98.97 E-value=3e-09 Score=120.63 Aligned_cols=140 Identities=11% Similarity=0.076 Sum_probs=91.0
Q ss_pred CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch--h------------------------------HH------HH
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD--G------------------------------HL------AA 65 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~--~------------------------------~~------~~ 65 (771)
++++.|+ | .||+|+.+ +|+.|+||+........ . .. -.
T Consensus 123 ~plasaSig--QVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 199 (437)
T TIGR01982 123 KPLAAASIA--QVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELD 199 (437)
T ss_pred cceeeeehh--heEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHC
Confidence 5688887 8 99999976 79999999986532110 0 00 01
Q ss_pred HHHHHHHHhcCC----CCCeeEEeeeEEecccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHH
Q 004157 66 ARNGVKRLRTVR----HPNILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAK 139 (771)
Q Consensus 66 ~~~ei~~Lk~Lr----HPnIlkv~d~~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~ 139 (771)
+.+|.+.+.+++ |.+-+.+-.++...+ +..+|||||+ .+|.+.+...... ..... + ..+++.
T Consensus 200 f~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~-------~~~vLvmE~i~G~~L~~~~~~~~~~-~~~~~-i---a~~~~~ 267 (437)
T TIGR01982 200 LRREAANASELGENFKNDPGVYVPEVYWDRT-------SERVLTMEWIDGIPLSDIAALDEAG-LDRKA-L---AENLAR 267 (437)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEeCCEehhhc-------CCceEEEEeECCcccccHHHHHhcC-CCHHH-H---HHHHHH
Confidence 344555555553 443344444443221 2459999999 3677665432111 11111 2 344444
Q ss_pred -HHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccC
Q 004157 140 -AVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (771)
Q Consensus 140 -aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~ 180 (771)
.+..+|. .|++|+|+||.||+++.+|.++|+|||++..+.
T Consensus 268 ~~l~ql~~-~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 268 SFLNQVLR-DGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred HHHHHHHh-CCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 4678886 899999999999999999999999999987654
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.5e-09 Score=124.92 Aligned_cols=142 Identities=13% Similarity=0.152 Sum_probs=90.4
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch--------------------------------hHHH---
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD--------------------------------GHLA--- 64 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~--------------------------------~~~~--- 64 (771)
|+. ++++.|+ | .||.|+.+++|+.|+||+........ +..+
T Consensus 122 fd~-~PlasaSia--QVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 122 FDI-KPLASASIA--QVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred cCh-hhhcCCCcc--EEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 554 6888888 8 99999999889999999997531100 1111
Q ss_pred ---HHHHHHHHHhcCC----CCCeeEEeeeEEecccCcCCcccEEEEEecCC--cchHHH--HHHhCCCCC-CcHHHHHH
Q 004157 65 ---AARNGVKRLRTVR----HPNILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEK--IKELGLEGS-QRDEYYAW 132 (771)
Q Consensus 65 ---~~~~ei~~Lk~Lr----HPnIlkv~d~~e~e~~d~~~~~~~iyIVtE~v--~~L~~~--L~~~~~~~~-~~~~~i~~ 132 (771)
.+.+|...+.+++ +.+.+.+-+++.+-+ +..+|||||| .+|.+. +...+.... .....+..
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~s-------t~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~ 271 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYC-------SETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEV 271 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccC-------CCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHH
Confidence 1334455555543 555555555554321 2568999999 467653 333221100 01111222
Q ss_pred HHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC----cEEEEccCcccccC
Q 004157 133 GLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL----DWKLHAFDVLSEFD 180 (771)
Q Consensus 133 gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G----~~KL~dFgla~~~~ 180 (771)
.+.||+ . .|++|+|+||.||+|+.+| .+++.|||++..+.
T Consensus 272 ~~~Qif-------~-~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 272 FFTQVF-------R-DGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred HHHHHH-------h-CCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 344443 2 6899999999999999988 99999999987664
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=98.85 E-value=8.6e-09 Score=100.96 Aligned_cols=124 Identities=13% Similarity=0.105 Sum_probs=86.3
Q ss_pred CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCe-eEEeeeEEecccCcCCcccEE
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNI-LAFLHSTEVENIDATSTKITI 102 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnI-lkv~d~~e~e~~d~~~~~~~i 102 (771)
+.++.|. + .||+++.. +..|+||+....... ....++|++.++.+.+.++ .+++..... .-
T Consensus 4 ~~l~~G~~~--~vy~~~~~--~~~~~lK~~~~~~~~---~~~~~~E~~~l~~l~~~~~~P~~~~~~~~----------~~ 66 (170)
T cd05151 4 SPLKGGMTN--KNYRVEVA--NKKYVVRIPGNGTEL---LINRENEAENSKLAAEAGIGPKLYYFDPE----------TG 66 (170)
T ss_pred eecCCcccC--ceEEEEEC--CeEEEEEeCCCCccc---ccCHHHHHHHHHHHHHhCCCCceEEEeCC----------CC
Confidence 3556665 6 78988764 788999997643211 2235789999999876554 445544321 24
Q ss_pred EEEecCCc--chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCC-----ceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 103 YIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCK-----LVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 103 yIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~-----ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
++|||++. ++... . ..... .+.+++.+|..||. .+ ++|||++|.||+++ ++.++|+|||.
T Consensus 67 ~lv~e~i~G~~l~~~----~---~~~~~----~~~~l~~~l~~LH~-~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~ 133 (170)
T cd05151 67 VLITEFIEGSELLTE----D---FSDPE----NLEKIAKLLKKLHS-SPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEY 133 (170)
T ss_pred eEEEEecCCCccccc----c---ccCHH----HHHHHHHHHHHHhC-CCCCCceeecCCCCcCcEEEE-CCeEEEEeccc
Confidence 89999993 34321 0 11122 27899999999996 66 59999999999999 67899999999
Q ss_pred ccc
Q 004157 176 LSE 178 (771)
Q Consensus 176 a~~ 178 (771)
+..
T Consensus 134 a~~ 136 (170)
T cd05151 134 AGM 136 (170)
T ss_pred ccC
Confidence 763
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.73 E-value=6.1e-09 Score=117.34 Aligned_cols=235 Identities=16% Similarity=0.088 Sum_probs=155.9
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEEC-CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEeccc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSK-DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENI 93 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k-~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~ 93 (771)
+.-.|.+...|+.+. + .++....+ .++..|++|.....-...........|+.....|. |.+++.++..|...
T Consensus 263 ~~~df~~v~~i~~~~~~--~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~-- 338 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFS--SVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQL-- 338 (524)
T ss_pred ecCCcceeEEccCCccc--cceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccc--
Confidence 344677777888877 5 56666655 67788888887654333322223445666666664 88899988888753
Q ss_pred CcCCcccEEEEEecCCcc----hHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCC-CcE
Q 004157 94 DATSTKITIYIVTEPVMP----LSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT-LDW 168 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v~~----L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~-G~~ 168 (771)
...||--|||.+ |...+... +. ...+.....|++.++.|+|+ ..++|+|++|+||++..+ +.-
T Consensus 339 ------r~~~ip~e~~~~~s~~l~~~~~~~-~d----~~~~~~~~~q~~~~l~~i~s-~~~~~~d~~psni~i~~~~~~~ 406 (524)
T KOG0601|consen 339 ------RQGYIPLEFCEGGSSSLRSVTSQM-LD----EDPRLRLTAQILTALNVIHS-KLFVHLDVKPSNILISNDGFFS 406 (524)
T ss_pred ------ccccCchhhhcCcchhhhhHHHHh-cC----cchhhhhHHHHHhccccccc-hhhhcccccccceeeccchhhh
Confidence 367899999943 22222211 11 11233448999999999996 899999999999999886 788
Q ss_pred EEEccCcccccCCCCCCCCCCccccccccCCCCCC-hhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCCh-hhh
Q 004157 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKP-VELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT-EEL 246 (771)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~a-PE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~-~~l 246 (771)
+++||++.+.+.-. ........+|.| .|++... ..+..+.|+|+||.-+++..++.++... .+.
T Consensus 407 ~~~~~~~~t~~~~~---------~~~~~~~~r~~p~~~~~~e~-----~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~ 472 (524)
T KOG0601|consen 407 KLGDFGCWTRLAFS---------SGVFHHIDRLYPIAEILLED-----YPHLSKADIFSLGLSVDEAITGSPLSESGVQS 472 (524)
T ss_pred hcccccccccccee---------cccccccccccccchhhccc-----cccccccccccccccccccccCcccCcccccc
Confidence 99999998753221 111122334443 5555443 4566789999999999999998865433 111
Q ss_pred --------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 247 --------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 247 --------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
......+..++.+.+.++..++..|+.+-++..+.
T Consensus 473 ~~i~~~~~p~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~ 515 (524)
T KOG0601|consen 473 LTIRSGDTPNLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHS 515 (524)
T ss_pred eeeecccccCCCchHHhhhhhhhhhcCCccccchhhhhhcccc
Confidence 11122234566667788889999999988876663
|
|
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.70 E-value=2.6e-07 Score=102.30 Aligned_cols=209 Identities=16% Similarity=0.196 Sum_probs=146.3
Q ss_pred EEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEEEEecCC---cc
Q 004157 35 SHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPV---MP 111 (771)
Q Consensus 35 tVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iyIVtE~v---~~ 111 (771)
+.|+++...||..|++|.++...... ...-..-+++++++.|+|||++.++|.+..-+ ...+++|++|. .+
T Consensus 291 Ttyk~~s~~DG~~YvLkRlhg~r~~~--~nk~t~lve~wkkl~h~NvV~frevf~t~tF~----D~SlvlvYDYyP~s~T 364 (655)
T KOG3741|consen 291 TTYKATSNVDGNAYVLKRLHGDRDQS--TNKDTSLVEAWKKLCHTNVVPFREVFLTYTFG----DLSLVLVYDYYPSSPT 364 (655)
T ss_pred eeEeeeeccCCceeeeeeeccccccC--cccchHHHHHHHHhccCceeehhhhhhhhccC----cceEEEEEecCCCCch
Confidence 68999999999999999995422111 11122347889999999999999999854433 56899999998 35
Q ss_pred hHHHHHHhC-C----------CC-CCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccccc
Q 004157 112 LSEKIKELG-L----------EG-SQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (771)
Q Consensus 112 L~~~L~~~~-~----------~~-~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~ 179 (771)
|.++.-... . .+ ...++++|-++.||..||.+||+ .|+.-+-|.+.+|+++.+-.++|++.|+....
T Consensus 365 L~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHs-sGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl 443 (655)
T KOG3741|consen 365 LYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHS-SGLACKTLDLKKILVTGKMRIRISGCGIMDVL 443 (655)
T ss_pred HHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHh-cCceeecccHhHeEeeCcceEEEecccceeee
Confidence 666442211 1 11 12245677789999999999997 89999999999999999989999988876544
Q ss_pred CCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCC-C-----hhhhhcc-CCC
Q 004157 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLS-K-----TEELRNT-ASI 252 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~-~-----~~~l~~~-~~I 252 (771)
..+. .. +-|.. .+-|.-.||.|+..|-+|..-. . ...++.+ ..+
T Consensus 444 ~~d~---~~--------------~le~~------------Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~~I~~~y 494 (655)
T KOG3741|consen 444 QEDP---TE--------------PLESQ------------QQNDLRDLGLLLLALATGTENSNRTDSTQSSHLTRITTTY 494 (655)
T ss_pred cCCC---Cc--------------chhHH------------hhhhHHHHHHHHHHHhhcccccccccchHHHHHHHhhhhh
Confidence 4321 00 11111 2568889999999999985321 1 1112222 456
Q ss_pred CcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 253 PKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 253 P~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
..++++.+.-+.+.++.. -++.+++.+
T Consensus 495 S~D~rn~v~yl~s~~~~~-ksI~~llp~ 521 (655)
T KOG3741|consen 495 STDLRNVVEYLESLNFRE-KSIQDLLPM 521 (655)
T ss_pred hHHHHHHHHHHHhcCccc-ccHHHHHHH
Confidence 677888888888888776 677788765
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.3e-07 Score=94.72 Aligned_cols=126 Identities=15% Similarity=0.168 Sum_probs=80.0
Q ss_pred EEEEeEECCCCCcEEEEEEeCCCC------------------------chhHHHHHHHHHHHHhcCCCC--CeeEEeeeE
Q 004157 35 SHFQGTSKDDGSPVSIFSISGTNA------------------------QDGHLAAARNGVKRLRTVRHP--NILAFLHST 88 (771)
Q Consensus 35 tVy~g~~k~~g~~VaIK~~~~~~~------------------------~~~~~~~~~~ei~~Lk~LrHP--nIlkv~d~~ 88 (771)
.||.|... +|+.|+||++..... .......+++|++.|+++..- ++.+++++.
T Consensus 1 ~Vy~~~~~-~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAIDP-DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEEC-TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEECC-CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 48999874 688999999984210 002245678999999999865 466666553
Q ss_pred EecccCcCCcccEEEEEecCCc--c--hHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHH-HHcCCCceecCCCCCCEEEc
Q 004157 89 EVENIDATSTKITIYIVTEPVM--P--LSEKIKELGLEGSQRDEYYAWGLNQIAKAVSF-LNNDCKLVHGNVCLSSVVVT 163 (771)
Q Consensus 89 e~e~~d~~~~~~~iyIVtE~v~--~--L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~f-LH~~~~ivH~dIkp~NI~v~ 163 (771)
. -+|||||++ . +.. |......... ....+.+++..+.. +| .+|++|||+++.||+++
T Consensus 80 ~------------~~ivME~I~~~G~~~~~-l~~~~~~~~~----~~~~~~~il~~~~~~~~-~~givHGDLs~~NIlv~ 141 (188)
T PF01163_consen 80 R------------NVIVMEYIGEDGVPLPR-LKDVDLSPEE----PKELLEEILEEIIKMLH-KAGIVHGDLSEYNILVD 141 (188)
T ss_dssp T------------TEEEEE--EETTEEGGC-HHHCGGGGST----HHHHHHHHHHHHHHHHH-CTTEEESS-STTSEEEE
T ss_pred C------------CEEEEEecCCCccchhh-HHhccccchh----HHHHHHHHHHHHHHHHH-hcCceecCCChhhEEee
Confidence 2 189999996 2 433 3332211112 22237788885555 46 49999999999999998
Q ss_pred CCCcEEEEccCcccccC
Q 004157 164 QTLDWKLHAFDVLSEFD 180 (771)
Q Consensus 164 ~~G~~KL~dFgla~~~~ 180 (771)
++ .+.++|||.+....
T Consensus 142 ~~-~~~iIDf~qav~~~ 157 (188)
T PF01163_consen 142 DG-KVYIIDFGQAVDSS 157 (188)
T ss_dssp TT-CEEE--GTTEEETT
T ss_pred cc-eEEEEecCcceecC
Confidence 87 89999999887654
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.49 E-value=7.1e-08 Score=114.12 Aligned_cols=248 Identities=16% Similarity=0.180 Sum_probs=156.8
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+.+.+.+.++. + .++.+....+|.-..+++..+...- ....+.++.+-.++-.-+||-++...-.+-.
T Consensus 806 ~~i~~p~qS~sp~--ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~-------- 875 (1205)
T KOG0606|consen 806 FEITKPSQSGSPS--SSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPC-------- 875 (1205)
T ss_pred ceecccccCCCCc--ccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCC--------
Confidence 44555555555 5 6666666666644444443321100 0112222222222333345655555444221
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
....|++++|+ ++|...|...+...... ..-++..+..++++||. ..++|+|++|.|++...+|..++.+|+..
T Consensus 876 rsP~~L~~~~~~~~~~~Skl~~~~~~saep---aRs~i~~~vqs~e~L~s-~~r~h~~~~p~~~l~~~~gh~~l~~~~t~ 951 (1205)
T KOG0606|consen 876 RSPLPLVGHYLNGGDLPSKLHNSGCLSAEP---ARSPILERVQSLESLHS-SLRKHRDLKPDSLLIAYDGHRPLTDFGTL 951 (1205)
T ss_pred CCCcchhhHHhccCCchhhhhcCCCccccc---ccchhHHHHhhhhcccc-chhhcccccccchhhcccCCcccCccccc
Confidence 34789999999 67888887765222111 12237788999999996 66899999999999999999999999854
Q ss_pred cccCCCCC-------CCC------------------CCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHH
Q 004157 177 SEFDGNNE-------AAN------------------GPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLI 231 (771)
Q Consensus 177 ~~~~~~~~-------~~~------------------~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li 231 (771)
........ ... ..........++.|.+||...+ ......+|.|++|+.+
T Consensus 952 ~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg------~~hgs~ad~~~~g~~l 1025 (1205)
T KOG0606|consen 952 SKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLG------RRHGSAADWWSSGVCL 1025 (1205)
T ss_pred cccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCccccc------ccCCCcchhhhhhhhh
Confidence 43221100 000 0011222344568999999887 3566789999999999
Q ss_pred HHHhhCCCCCChhhhhcc---------------CCCCcchHHHHHHHhccCCCCCCChH---HHhhCCCCCcchhh
Q 004157 232 YELFSGMRLSKTEELRNT---------------ASIPKSLLPDYQRLLSSMPSRRLNSS---KLIENSEYFQNKLV 289 (771)
Q Consensus 232 ~el~~g~~p~~~~~l~~~---------------~~IP~~l~~~i~~lL~~~P~~Rps~~---~lL~~~~fF~n~lv 289 (771)
+|.++|.++|+...-.++ ..++...++++.+++..++.+|..+. +.- ...||+..-.
T Consensus 1026 ~e~l~g~pp~na~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k-~~~~~~~~~~ 1100 (1205)
T KOG0606|consen 1026 FEVLTGIPPFNAETPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVK-GHPFFQDVDW 1100 (1205)
T ss_pred hhhhcCCCCCCCcchhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcccccccc-cCCccCCCCc
Confidence 999999999876543221 23455688888999999999999875 433 3478865433
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.8e-06 Score=84.79 Aligned_cols=127 Identities=14% Similarity=0.142 Sum_probs=87.9
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch------hHHHHHHHHHHHHhcCCCCCe--eEEeeeEEecccCcC
Q 004157 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD------GHLAAARNGVKRLRTVRHPNI--LAFLHSTEVENIDAT 96 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~------~~~~~~~~ei~~Lk~LrHPnI--lkv~d~~e~e~~d~~ 96 (771)
.+.+|. . .+|.+... |.+|.+|.=-.+.-.. -....-++|+++|.+++--+| ..++++..
T Consensus 3 ~i~~GAEa--~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~------- 71 (204)
T COG3642 3 LIKQGAEA--IIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDP------- 71 (204)
T ss_pred hhhCCcce--eEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcC-------
Confidence 355666 5 67777553 5567677644432221 224456789999999875443 33444332
Q ss_pred CcccEEEEEecCC-c-chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV-M-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v-~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
....|+|||+ + .|.+.|.... ... +..|-.-+.-||. ++|+||||.++||.++..+ +.++|||
T Consensus 72 ---~~~~I~me~I~G~~lkd~l~~~~------~~~----~r~vG~~vg~lH~-~givHGDLTtsNiIl~~~~-i~~IDfG 136 (204)
T COG3642 72 ---DNGLIVMEYIEGELLKDALEEAR------PDL----LREVGRLVGKLHK-AGIVHGDLTTSNIILSGGR-IYFIDFG 136 (204)
T ss_pred ---CCCEEEEEEeCChhHHHHHHhcc------hHH----HHHHHHHHHHHHh-cCeecCCCccceEEEeCCc-EEEEECC
Confidence 2568999999 3 4777777651 222 7778888888996 9999999999999997666 9999999
Q ss_pred cccc
Q 004157 175 VLSE 178 (771)
Q Consensus 175 la~~ 178 (771)
+...
T Consensus 137 Lg~~ 140 (204)
T COG3642 137 LGEF 140 (204)
T ss_pred cccc
Confidence 9864
|
|
| >PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.1e-06 Score=89.60 Aligned_cols=140 Identities=16% Similarity=0.168 Sum_probs=91.5
Q ss_pred CceEEEEeEECCCCCcEEEEEEeCCCCch-----hHHHHHHHHHHHHhcCCCCC--eeEEeeeEEecccCcCCcccEEEE
Q 004157 32 GSWSHFQGTSKDDGSPVSIFSISGTNAQD-----GHLAAARNGVKRLRTVRHPN--ILAFLHSTEVENIDATSTKITIYI 104 (771)
Q Consensus 32 g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-----~~~~~~~~ei~~Lk~LrHPn--Ilkv~d~~e~e~~d~~~~~~~iyI 104 (771)
+.|.+..+.....++.+-+|.+....... -....+.+|++.+..|+.-+ +.+.+.+.+... ++ ....||
T Consensus 19 ~~~~~~~~~~~~~~~~y~~k~~~~~~~~~~~~~~~~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~--~~--~~~s~l 94 (206)
T PF06293_consen 19 GGWFGVQRVVDLVGRRYYRKRLWNKLRRDRLRFPLRRSRAKREWRNLQRLREAGIPTPEPVAYGERRK--GG--GYRSYL 94 (206)
T ss_pred eEEEEEEccccccceEEEECCeechhccchhhhcccchHHHHHHHHHHHHHHcCCCCCcEEEEEEEcC--CC--ceeEEE
Confidence 44544433323345566666544322221 12345778888888876333 455555555422 11 245689
Q ss_pred EecCCc---chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC---cEEEEccCcccc
Q 004157 105 VTEPVM---PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL---DWKLHAFDVLSE 178 (771)
Q Consensus 105 VtE~v~---~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G---~~KL~dFgla~~ 178 (771)
|||++. +|.+++.......... ....+.+++..+.-||. +|++|+|+++.||||+.++ .+.|+||+-++.
T Consensus 95 ite~l~~~~~L~~~~~~~~~~~~~~---~~~ll~~l~~~i~~lH~-~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 95 ITEALPGAQDLRDLLQQWEQLDPSQ---RRELLRALARLIAKLHD-AGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred EEEeCCCcccHHHHHHhhcccchhh---HHHHHHHHHHHHHHHHH-CcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 999983 6888888743222222 23348999999999996 9999999999999999988 899999998765
Q ss_pred c
Q 004157 179 F 179 (771)
Q Consensus 179 ~ 179 (771)
.
T Consensus 171 ~ 171 (206)
T PF06293_consen 171 R 171 (206)
T ss_pred C
Confidence 4
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane |
| >KOG0211 consensus Protein phosphatase 2A regulatory subunit A and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.4e-06 Score=102.86 Aligned_cols=190 Identities=19% Similarity=0.243 Sum_probs=152.3
Q ss_pred hhhhcCCChhhhhhhhHHHHHHHHhcCCCCchhhHHHH---HhccC----CChhhhhhhhHHHHHHhhcCCcHHHHHHHH
Q 004157 314 PNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALL---KMGSW----LSTEEFSVKVLPTIVKLFASNDRAIRVALL 386 (771)
Q Consensus 314 ~~~l~~fP~~~~~~kILP~Ll~~~~~~~~~~~~L~~ll---~i~~~----l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL 386 (771)
..+.+.+|..-...-++|.++..++... +-+...+. ..... ...+..++..+|.|..+-....|++|..++
T Consensus 423 ~~~~p~~~k~~ti~~llp~~~~~l~de~--~~V~lnli~~ls~~~~v~~v~g~~~~s~slLp~i~el~~d~~wRvr~ail 500 (759)
T KOG0211|consen 423 TGLSPILPKERTISELLPLLIGNLKDED--PIVRLNLIDKLSLLEEVNDVIGISTVSNSLLPAIVELAEDLLWRVRLAIL 500 (759)
T ss_pred cccCccCCcCcCccccChhhhhhcchhh--HHHHHhhHHHHHHHHhccCcccchhhhhhhhhhhhhhccchhHHHHHHHH
Confidence 3445556655555666777776554322 22222222 22222 233667788899999996666799999999
Q ss_pred HhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHHHHHHhhccCCCCcchhhHHHH
Q 004157 387 QHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTIL 466 (771)
Q Consensus 387 ~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL~~laklq~D~~~~IRtnt~ic 466 (771)
++++.....+..+.++++.-+.+..++.|....||+++.+.++.++..++..+-..+++|.+.....++...+|..++.|
T Consensus 501 ~~ip~la~q~~~~~~~~~~~~l~~~~l~d~v~~Ir~~aa~~l~~l~~~~G~~w~~~~~i~k~L~~~~q~~y~~R~t~l~s 580 (759)
T KOG0211|consen 501 EYIPQLALQLGVEFFDEKLAELLRTWLPDHVYSIREAAARNLPALVETFGSEWARLEEIPKLLAMDLQDNYLVRMTTLFS 580 (759)
T ss_pred HHHHHHHHhhhhHHhhHHHHHHHHhhhhhhHHHHHHHHHHHhHHHHHHhCcchhHHHhhHHHHHHhcCcccchhhHHHHH
Confidence 99999999999999999988999999999999999999999999999999888888899988888887789999999999
Q ss_pred HHHhhhccCcchhhHHhHHHHHHhhhcCCCcchhhheeee
Q 004157 467 LGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 467 l~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R~a~l~a 506 (771)
|.-|++.++++...+.|+|.|. .+.+|+.+.+|+-++..
T Consensus 581 i~~la~v~g~ei~~~~Llp~~~-~l~~D~vanVR~nvak~ 619 (759)
T KOG0211|consen 581 IHELAEVLGQEITCEDLLPVFL-DLVKDPVANVRINVAKH 619 (759)
T ss_pred HHHHHHHhccHHHHHHHhHHHH-HhccCCchhhhhhHHHH
Confidence 9999999999988888999999 99999999999888776
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.40 E-value=2.8e-06 Score=83.08 Aligned_cols=142 Identities=15% Similarity=0.046 Sum_probs=95.4
Q ss_pred ecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch------hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 23 IGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD------GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 23 i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~------~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
..+.+.+|. + .|+.+.. .|+.+.||.-..+.-+. -...+.++|.+.|.+++--+|.--.=++.+..
T Consensus 11 ~l~likQGAEA--rv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~--- 83 (229)
T KOG3087|consen 11 SLELIKQGAEA--RVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTY--- 83 (229)
T ss_pred cceeeecccee--eEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecC---
Confidence 344566777 7 8899876 48898888654332221 12455678999999987545433222232222
Q ss_pred CCcccEEEEEecCC-c--chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCc-E--E
Q 004157 96 TSTKITIYIVTEPV-M--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD-W--K 169 (771)
Q Consensus 96 ~~~~~~iyIVtE~v-~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~-~--K 169 (771)
.-.|+||++ + .+.+++...-..... .....-.+.+|-+.+.-||. ++++||||..+||++..+|. | .
T Consensus 84 -----~~~i~ME~~~g~~~vk~~i~~~~~~~~~-d~~~~~~~~~iG~~igklH~-ndiiHGDLTTSNill~~~~~~~~~~ 156 (229)
T KOG3087|consen 84 -----GGQIYMEFIDGASTVKDFILSTMEDESE-DEGLAELARRIGELIGKLHD-NDIIHGDLTTSNILLRSDGNQITPI 156 (229)
T ss_pred -----CCeEEEEeccchhHHHHHHHHHccCccc-chhHHHHHHHHHHHHHHhhh-CCeecccccccceEEecCCCcCceE
Confidence 238899999 4 477777664332222 22223348889999999995 99999999999999987654 5 8
Q ss_pred EEccCcccc
Q 004157 170 LHAFDVLSE 178 (771)
Q Consensus 170 L~dFgla~~ 178 (771)
|+|||++..
T Consensus 157 lIdfgls~~ 165 (229)
T KOG3087|consen 157 LIDFGLSSV 165 (229)
T ss_pred EEeecchhc
Confidence 999999754
|
|
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.39 E-value=2.5e-06 Score=88.52 Aligned_cols=136 Identities=15% Similarity=0.116 Sum_probs=95.6
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCC--------CCch------------hHHHHHHHHHHHHhcCCCC
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGT--------NAQD------------GHLAAARNGVKRLRTVRHP 79 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~--------~~~~------------~~~~~~~~ei~~Lk~LrHP 79 (771)
+.++++||.|- + .||.|.+. .|.+++||.-... ...+ -....+++|++.|.+|.--
T Consensus 93 e~iG~~IGvGKEs--dVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~ 169 (304)
T COG0478 93 EAIGTKIGVGKES--DVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPE 169 (304)
T ss_pred HhhccccccCccc--eEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhc
Confidence 56788999998 8 99999976 6899999975521 0000 1245678999999999755
Q ss_pred --CeeEEeeeEEecccCcCCcccEEEEEecCCc--chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCC
Q 004157 80 --NILAFLHSTEVENIDATSTKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNV 155 (771)
Q Consensus 80 --nIlkv~d~~e~e~~d~~~~~~~iyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dI 155 (771)
.|.+.++.- .-.+|||++. +|... .. .......+ +..|+.-+.-+-. +|+||||+
T Consensus 170 G~~VP~P~~~n------------RHaVvMe~ieG~eL~~~----r~-~~en~~~i---l~~il~~~~~~~~-~GiVHGDl 228 (304)
T COG0478 170 GVKVPKPIAWN------------RHAVVMEYIEGVELYRL----RL-DVENPDEI---LDKILEEVRKAYR-RGIVHGDL 228 (304)
T ss_pred CCCCCCccccc------------cceeeeehcccceeecc----cC-cccCHHHH---HHHHHHHHHHHHH-cCccccCC
Confidence 566766543 3489999993 44321 11 11112222 5555555555553 89999999
Q ss_pred CCCCEEEcCCCcEEEEccCcccccC
Q 004157 156 CLSSVVVTQTLDWKLHAFDVLSEFD 180 (771)
Q Consensus 156 kp~NI~v~~~G~~KL~dFgla~~~~ 180 (771)
++-||+|+++|.+.++||--+....
T Consensus 229 SefNIlV~~dg~~~vIDwPQ~v~~~ 253 (304)
T COG0478 229 SEFNILVTEDGDIVVIDWPQAVPIS 253 (304)
T ss_pred chheEEEecCCCEEEEeCcccccCC
Confidence 9999999999999999998776554
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=98.38 E-value=8.4e-07 Score=90.53 Aligned_cols=76 Identities=13% Similarity=0.047 Sum_probs=50.2
Q ss_pred CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCC--CeeEEeeeEEecccCcCCcccE
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHP--NILAFLHSTEVENIDATSTKIT 101 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHP--nIlkv~d~~e~e~~d~~~~~~~ 101 (771)
+.++.|. + .+|+++.. +|+.+++|+....... .....+.+|++.++.|++. .+.+++.+...... ...
T Consensus 4 ~~l~~G~~n--~~~~v~~~-~g~~~ilK~~~~~~~~-~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~-----~~~ 74 (223)
T cd05154 4 RQLSGGQSN--LTYLLTAG-GGRRLVLRRPPPGALL-PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSV-----LGT 74 (223)
T ss_pred eecCCCccc--eEEEEEec-CCcceEEEeCCCcccC-cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCc-----cCC
Confidence 3566665 6 78998865 3689999997653221 1234678899999999763 35666666543210 125
Q ss_pred EEEEecCC
Q 004157 102 IYIVTEPV 109 (771)
Q Consensus 102 iyIVtE~v 109 (771)
.|+|||++
T Consensus 75 ~~~v~e~i 82 (223)
T cd05154 75 PFYVMERV 82 (223)
T ss_pred ceEEEEEe
Confidence 68999999
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=98.27 E-value=6.5e-06 Score=87.33 Aligned_cols=136 Identities=10% Similarity=0.116 Sum_probs=88.2
Q ss_pred EEEEeEECCCCCcEEEEEEeCCCCchhHHH----------HHHHHHHHHhcCCCCCe--eEEeeeEEecccCcCCcccEE
Q 004157 35 SHFQGTSKDDGSPVSIFSISGTNAQDGHLA----------AARNGVKRLRTVRHPNI--LAFLHSTEVENIDATSTKITI 102 (771)
Q Consensus 35 tVy~g~~k~~g~~VaIK~~~~~~~~~~~~~----------~~~~ei~~Lk~LrHPnI--lkv~d~~e~e~~d~~~~~~~i 102 (771)
.|++... .|+.|.||.+......+ ..+ .+.+|++.+.+|+.-+| ...+.+.+... + + ....-
T Consensus 37 rvvr~~~--~g~~~~vKr~~~~~~~~-~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~-~-~-~~~~s 110 (268)
T PRK15123 37 RTLRFEL--AGKSYFLKWHRGTGWGE-IFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGS-N-P-ATRTS 110 (268)
T ss_pred eEEEEEE--CCEEEEEEEecCCcHHH-HhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecC-C-C-cccee
Confidence 4556654 47789999875432111 111 37789888888853333 33344443211 1 0 01246
Q ss_pred EEEecCCc---chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC-------CCcEEEEc
Q 004157 103 YIVTEPVM---PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ-------TLDWKLHA 172 (771)
Q Consensus 103 yIVtE~v~---~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~-------~G~~KL~d 172 (771)
|||||++. +|.+++...... ..........+.+|+..+.-||. +|++|||+++.||+++. ++.+.|+|
T Consensus 111 ~LVte~l~~~~sL~~~~~~~~~~-~~~~~~~~~ll~~la~~i~~LH~-~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LID 188 (268)
T PRK15123 111 FIITEDLAPTISLEDYCADWATN-PPDPRLKRMLIKRVATMVRDMHA-AGINHRDCYICHFLLHLPFPGREEDLKLSVID 188 (268)
T ss_pred EEEEeeCCCCccHHHHHHhhccc-CCCHHHHHHHHHHHHHHHHHHHH-CcCccCCCChhhEEEeccccCCCCCceEEEEE
Confidence 89999993 588887643211 11122233448999999999996 99999999999999975 46799999
Q ss_pred cCcccc
Q 004157 173 FDVLSE 178 (771)
Q Consensus 173 Fgla~~ 178 (771)
|+.+..
T Consensus 189 l~r~~~ 194 (268)
T PRK15123 189 LHRAQI 194 (268)
T ss_pred CCcccc
Confidence 998753
|
|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.24 E-value=3.3e-06 Score=96.56 Aligned_cols=181 Identities=13% Similarity=0.150 Sum_probs=160.8
Q ss_pred hhhhhHHHHHHHHhcCCC--CchhhHHHHHhccCCChhhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhh
Q 004157 325 VLKKLLPLLASALEFGSA--AAPALTALLKMGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVD 402 (771)
Q Consensus 325 ~~~kILP~Ll~~~~~~~~--~~~~L~~ll~i~~~l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~ 402 (771)
...+|+|.|++.|...+. ....|.-+.+....|+.+.+...|+|.+..-|.+.+..+|-.-|..|..++.+|+++.++
T Consensus 327 yq~~i~p~l~kLF~~~Dr~iR~~LL~~i~~~i~~Lt~~~~~d~I~phv~~G~~DTn~~Lre~Tlksm~~La~kL~~~~Ln 406 (690)
T KOG1243|consen 327 YQVRIIPVLLKLFKSPDRQIRLLLLQYIEKYIDHLTKQILNDQIFPHVALGFLDTNATLREQTLKSMAVLAPKLSKRNLN 406 (690)
T ss_pred cccchhhhHHHHhcCcchHHHHHHHHhHHHHhhhcCHHhhcchhHHHHHhhcccCCHHHHHHHHHHHHHHHhhhchhhhc
Confidence 778899999999987654 334566788999999999999999999999999999999999999999999999999999
Q ss_pred hccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHH
Q 004157 403 EQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRV 482 (771)
Q Consensus 403 ~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~v 482 (771)
..++-+|..+=.|....||.-|.-.+-.+.+.|.....++-|.-.+.+-..|+.+.=|..+..-+.....++..++...-
T Consensus 407 ~Ellr~~ar~q~d~~~~irtntticlgki~~~l~~~~R~~vL~~aftralkdpf~paR~a~v~~l~at~~~~~~~~va~k 486 (690)
T KOG1243|consen 407 GELLRYLARLQPDEHGGIRTNTTICLGKIAPHLAASVRKRVLASAFTRALKDPFVPARKAGVLALAATQEYFDQSEVANK 486 (690)
T ss_pred HHHHHHHHhhCccccCcccccceeeecccccccchhhhccccchhhhhhhcCCCCCchhhhhHHHhhcccccchhhhhhh
Confidence 99999999999999999999999999999999988776655555566656799999999999999999999998877777
Q ss_pred hHHHHHHhhhcCCCcchhhheeee
Q 004157 483 LINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 483 L~~af~~~~lkD~f~~~R~a~l~a 506 (771)
++|... -.+.|+...+|--|..+
T Consensus 487 Ilp~l~-pl~vd~e~~vr~~a~~~ 509 (690)
T KOG1243|consen 487 ILPSLV-PLTVDPEKTVRDTAEKA 509 (690)
T ss_pred cccccc-ccccCcccchhhHHHHH
Confidence 788888 78999999999877665
|
|
| >COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.17 E-value=3.3e-05 Score=83.97 Aligned_cols=236 Identities=15% Similarity=0.128 Sum_probs=137.6
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+-..++.+|+|+ + .+|..-. -+ .+.-|++.....-.. .+.-....+.=.||-+-.-+ .+-.+.-.|+.-
T Consensus 12 ~i~~gr~LgqGgea--~ly~l~e--~~-d~VAKIYh~Pppa~~----aqk~a~la~~p~~p~~~~rv-aWPqa~L~G~~~ 81 (637)
T COG4248 12 PIPPGRPLGQGGEA--DLYTLGE--VR-DQVAKIYHAPPPAAQ----AQKVAELAATPDAPLLNYRV-AWPQATLHGGRR 81 (637)
T ss_pred ccCCCccccCCccc--eeeecch--hh-chhheeecCCCchHH----HHHHHHhccCCCCcchhhhh-cccHHHhhCCCc
Confidence 345677888887 4 4554321 12 234588876432211 11111222333566433211 111111111111
Q ss_pred ccEEEEEecCC---cchHHHHHHh---CCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 99 KITIYIVTEPV---MPLSEKIKEL---GLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 99 ~~~iyIVtE~v---~~L~~~L~~~---~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
...+.+.|..+ .+...++.-. .......-.++.+..+.|+.+..-||+ .|.+-||++++|++|++++.+.|.|
T Consensus 82 ~~~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~-~Gh~vGDVn~~~~lVsd~~~V~LVd 160 (637)
T COG4248 82 GKVIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHE-HGHVVGDVNQNSFLVSDDSKVVLVD 160 (637)
T ss_pred cceeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHh-cCCcccccCccceeeecCceEEEEc
Confidence 34588999988 3555555322 122223345566678899999999997 8999999999999999999999998
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccc-cccccccCCCCCcchHHHHHHHHHHHhhC-CCCCChhhh----
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAK-SDWTAVRKSPPWSIDSWGLGCLIYELFSG-MRLSKTEEL---- 246 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~-~~~~~~~~~~~~~~Di~SLG~li~el~~g-~~p~~~~~l---- 246 (771)
=+--.. ... ......-++...|.|||... +.+.. ..-....|.|+||+||++++.| ..||..-..
T Consensus 161 sDsfqi-~~n------g~~~~cpVg~~eftPPElQ~~~sf~g--~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~a 231 (637)
T COG4248 161 SDSFQI-NAN------GTLHLCPVGVSEFTPPELQTLPSFVG--FERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDA 231 (637)
T ss_pred ccceee-ccC------CceEecccCccccCCHHHhccccccc--cCCCccccchhHHHHHHHHHhcCCCCCCcccccCCC
Confidence 543211 111 11111223334899999976 22211 2234568999999999999887 566532110
Q ss_pred ------------------hc-----------cCCCCcchHHHHHHHhcc--CCCCCCChH
Q 004157 247 ------------------RN-----------TASIPKSLLPDYQRLLSS--MPSRRLNSS 275 (771)
Q Consensus 247 ------------------~~-----------~~~IP~~l~~~i~~lL~~--~P~~Rps~~ 275 (771)
.. ..-+|.++..++.+|+.. ++.-|||++
T Consensus 232 p~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~ 291 (637)
T COG4248 232 PNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAK 291 (637)
T ss_pred CCcchhhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHH
Confidence 00 023567788888888864 477999975
|
|
| >KOG0211 consensus Protein phosphatase 2A regulatory subunit A and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.16 E-value=2.5e-05 Score=92.56 Aligned_cols=187 Identities=20% Similarity=0.163 Sum_probs=150.8
Q ss_pred CCChhhhhhhhHHHHHHHHhcCC--CCchhhHHHHHhccCCChhhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhc
Q 004157 319 QLPRQIVLKKLLPLLASALEFGS--AAAPALTALLKMGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSF 396 (771)
Q Consensus 319 ~fP~~~~~~kILP~Ll~~~~~~~--~~~~~L~~ll~i~~~l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l 396 (771)
..-.....+-.||.+.+..+... ....++.-+=..+..+-.+-|..+..+.+.....+....||=....+|+.++..+
T Consensus 470 v~g~~~~s~slLp~i~el~~d~~wRvr~ail~~ip~la~q~~~~~~~~~~~~l~~~~l~d~v~~Ir~~aa~~l~~l~~~~ 549 (759)
T KOG0211|consen 470 VIGISTVSNSLLPAIVELAEDLLWRVRLAILEYIPQLALQLGVEFFDEKLAELLRTWLPDHVYSIREAAARNLPALVETF 549 (759)
T ss_pred cccchhhhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhhhhhhHHHHHHHHHHHhHHHHHHh
Confidence 33344555666777666554321 1111222111122222233344445566666666677899999999999999999
Q ss_pred ChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCc
Q 004157 397 SAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNE 476 (771)
Q Consensus 397 ~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~ 476 (771)
+.+--...+.|.++.+..+.+...|-.++-++..+++.++.+....+|||.+..+..|+.+.||.|.+.-|-+|.++|..
T Consensus 550 G~~w~~~~~i~k~L~~~~q~~y~~R~t~l~si~~la~v~g~ei~~~~Llp~~~~l~~D~vanVR~nvak~L~~i~~~L~~ 629 (759)
T KOG0211|consen 550 GSEWARLEEIPKLLAMDLQDNYLVRMTTLFSIHELAEVLGQEITCEDLLPVFLDLVKDPVANVRINVAKHLPKILKLLDE 629 (759)
T ss_pred CcchhHHHhhHHHHHHhcCcccchhhHHHHHHHHHHHHhccHHHHHHHhHHHHHhccCCchhhhhhHHHHHHHHHhhcch
Confidence 98888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHhHHHHHHhhhcCCCcchhhheeee
Q 004157 477 GTRKRVLINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 477 ~~~~~vL~~af~~~~lkD~f~~~R~a~l~a 506 (771)
+.+.+.+.|+.- ...+|+...+|.+|+.|
T Consensus 630 ~~~~~~v~pll~-~L~~d~~~dvr~~a~~a 658 (759)
T KOG0211|consen 630 SVRDEEVLPLLE-TLSSDQELDVRYRAILA 658 (759)
T ss_pred HHHHHHHHHHHH-HhccCcccchhHHHHHH
Confidence 999999999999 89999999999999999
|
|
| >KOG2137 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.16 E-value=8.1e-06 Score=93.80 Aligned_cols=170 Identities=15% Similarity=0.164 Sum_probs=126.9
Q ss_pred CCChhhhhhhhHHHHHHHHhcCCC---CchhhHHHHHhccCCChhhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhh
Q 004157 319 QLPRQIVLKKLLPLLASALEFGSA---AAPALTALLKMGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQS 395 (771)
Q Consensus 319 ~fP~~~~~~kILP~Ll~~~~~~~~---~~~~L~~ll~i~~~l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~ 395 (771)
..+..-...+++|.|...++.... ...++..+=.|.++++.++|.++|+|.|...|...|++|.-.+|+.++.+.+.
T Consensus 340 ~~s~~~~~~~~~p~l~pi~~~~~~~~~~l~i~e~mdlL~~Kt~~e~~~~~IlplL~~S~~~~~~~iQ~~~L~~lptv~e~ 419 (700)
T KOG2137|consen 340 GLSQNEFGPKMLPALKPIYSASDPKQALLFILENMDLLKEKTPPEEVKEKILPLLYRSLEDSDVQIQELALQILPTVAES 419 (700)
T ss_pred ccchhhhhhhhhHHHHHHhccCCcccchhhHHhhHHHHHhhCChHHHHHHHHHHHHHHhcCcchhhHHHHHHhhhHHHHh
Confidence 345555677888888888875221 12223333347788999999999999999999999999999999999999999
Q ss_pred cChhhhhhccHHHHHhh-cCCCcHHHHHHHHHHHHhhccCCChhHHhHHHHHHHHhhccC-CCCcchhhHHHHHHHhhhc
Q 004157 396 FSAQVVDEQVYPHVATG-FADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVD-EEPAIRTNTTILLGNIASH 473 (771)
Q Consensus 396 l~~~~v~~~I~p~l~~g-f~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL~~laklq~D-~~~~IRtnt~icl~kia~~ 473 (771)
++-..|++.|+|.+... |..++..++-.+|-++-.++..++.-.+..+++|+++..+.+ +..-.++-.+.-..-+-.+
T Consensus 420 iD~~~vk~~ilP~l~~l~~~tt~~~vkvn~L~c~~~l~q~lD~~~v~d~~lpi~~~~~~~dp~iv~~~~~i~~~l~~~~~ 499 (700)
T KOG2137|consen 420 IDVPFVKQAILPRLKNLAFKTTNLYVKVNVLPCLAGLIQRLDKAAVLDELLPILKCIKTRDPAIVMGFLRIYEALALIIY 499 (700)
T ss_pred ccHHHHHHHHHHHhhcchhcccchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHhhcc
Confidence 99999999999998765 556678999999999999999999999999999999999774 3333332222222222233
Q ss_pred cCcchhhHHhHHHHH
Q 004157 474 LNEGTRKRVLINAFT 488 (771)
Q Consensus 474 L~~~~~~~vL~~af~ 488 (771)
.+++...+.++|..-
T Consensus 500 ~g~ev~~~~VlPlli 514 (700)
T KOG2137|consen 500 SGVEVMAENVLPLLI 514 (700)
T ss_pred cceeeehhhhhhhhh
Confidence 334555555555544
|
|
| >PRK09902 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.09 E-value=4.1e-05 Score=77.68 Aligned_cols=137 Identities=10% Similarity=0.032 Sum_probs=89.5
Q ss_pred EEEEeEECCCCCcEEEEEEeCCCCc----hhHHHHHHHHHHHHhcCCCC--CeeEEeeeEEecccCcCCcccEEEEEecC
Q 004157 35 SHFQGTSKDDGSPVSIFSISGTNAQ----DGHLAAARNGVKRLRTVRHP--NILAFLHSTEVENIDATSTKITIYIVTEP 108 (771)
Q Consensus 35 tVy~g~~k~~g~~VaIK~~~~~~~~----~~~~~~~~~ei~~Lk~LrHP--nIlkv~d~~e~e~~d~~~~~~~iyIVtE~ 108 (771)
.|+.-... |..+-+|.-...... .--...+.+|+..|++|..- .+.+++ +++... +++ ...-+||||.
T Consensus 33 gV~r~~~~--g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k-~~~--~~rA~LVTe~ 106 (216)
T PRK09902 33 GVQCVERN--GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVK-IEG--EWRALLVTED 106 (216)
T ss_pred eEEEEEeC--CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeec-cCC--ceEEEEEEEe
Confidence 57775542 445666654411100 11245788899999988632 255655 333211 111 3467999998
Q ss_pred Cc---chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCc--EEEEccCccccc
Q 004157 109 VM---PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD--WKLHAFDVLSEF 179 (771)
Q Consensus 109 v~---~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~--~KL~dFgla~~~ 179 (771)
++ +|.+++.+....... ...-..++.+|+.+|.-||. .|+.|+|+.+.||+++..|. ++|+||+-++..
T Consensus 107 L~g~~~L~~~l~~~~~~~~~-~~~k~~il~~va~~ia~LH~-~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~~ 180 (216)
T PRK09902 107 MAGFISIADWYAQHAVSPYS-DEVRQAMLKAVALAFKKMHS-VNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRR 180 (216)
T ss_pred CCCCccHHHHHhcCCcCCcc-hHHHHHHHHHHHHHHHHHHH-CCCcCCCCCHhheeecCCCCeeEEEEEhhccchh
Confidence 84 688888765432111 11112338999999999995 99999999999999987777 999999987654
|
|
| >COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=97.93 E-value=3.8e-05 Score=79.09 Aligned_cols=128 Identities=15% Similarity=0.159 Sum_probs=86.2
Q ss_pred EEEEeEECCCCCcEEEEEEeCCCCc----------------------hhHHHHHHHHHHHHhcCCCC--CeeEEeeeEEe
Q 004157 35 SHFQGTSKDDGSPVSIFSISGTNAQ----------------------DGHLAAARNGVKRLRTVRHP--NILAFLHSTEV 90 (771)
Q Consensus 35 tVy~g~~k~~g~~VaIK~~~~~~~~----------------------~~~~~~~~~ei~~Lk~LrHP--nIlkv~d~~e~ 90 (771)
+||.|.. .++..|+||+|...... .....=.++|++.|+++..- .+.+-+.+..
T Consensus 63 ~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP~Pi~~~~- 140 (268)
T COG1718 63 NVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVPEPIAFRN- 140 (268)
T ss_pred EEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCCceeecC-
Confidence 8999986 47899999999843110 01122356899999998633 3445555443
Q ss_pred cccCcCCcccEEEEEecCCcc---hHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCc
Q 004157 91 ENIDATSTKITIYIVTEPVMP---LSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD 167 (771)
Q Consensus 91 e~~d~~~~~~~iyIVtE~v~~---L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~ 167 (771)
-.+|||+++. -.-.|+........ ......++++.+.-|-..+++|||||+.=||++. +|.
T Consensus 141 -----------nVLvMEfIg~~g~pAP~LkDv~~e~~e----~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~-~~~ 204 (268)
T COG1718 141 -----------NVLVMEFIGDDGLPAPRLKDVPLELEE----AEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH-DGE 204 (268)
T ss_pred -----------CeEEEEeccCCCCCCCCcccCCcCchh----HHHHHHHHHHHHHHHHHhcCcccccchhhheEEE-CCe
Confidence 2899999952 11122222221111 1122667888888887669999999999999998 888
Q ss_pred EEEEccCcccccC
Q 004157 168 WKLHAFDVLSEFD 180 (771)
Q Consensus 168 ~KL~dFgla~~~~ 180 (771)
..++||+-+....
T Consensus 205 p~iID~~QaV~~~ 217 (268)
T COG1718 205 PYIIDVSQAVTID 217 (268)
T ss_pred EEEEECccccccC
Confidence 9999999887654
|
|
| >COG0661 AarF Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00015 Score=83.50 Aligned_cols=140 Identities=16% Similarity=0.107 Sum_probs=82.6
Q ss_pred CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc--------------------------------hhHHH------H
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ--------------------------------DGHLA------A 65 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~--------------------------------~~~~~------~ 65 (771)
+.++.++ | .||+|+.+ +|+.|+||+....... ++..+ .
T Consensus 131 ~PiAsASIa--QVH~A~L~-sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElD 207 (517)
T COG0661 131 EPIASASIA--QVHRAVLK-SGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELD 207 (517)
T ss_pred CchhhhhHh--hheeEEec-CCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhC
Confidence 3455665 6 99999988 4999999998842100 00011 1
Q ss_pred HHHHHHHHhcCC----CCCeeEEeeeEEecccCcCCcccEEEEEecCCc--chHHH--HHHhCCCCCCcHHHHHHHHHHH
Q 004157 66 ARNGVKRLRTVR----HPNILAFLHSTEVENIDATSTKITIYIVTEPVM--PLSEK--IKELGLEGSQRDEYYAWGLNQI 137 (771)
Q Consensus 66 ~~~ei~~Lk~Lr----HPnIlkv~d~~e~e~~d~~~~~~~iyIVtE~v~--~L~~~--L~~~~~~~~~~~~~i~~gl~QI 137 (771)
+++|...+.+++ +..=+.+=.++.+-+ +.-.++|||+. ++.+. ++..+.. ... +..-+.++
T Consensus 208 y~~EA~n~~~~~~nf~~~~~v~VP~V~we~t-------~~~VLtmE~i~Gi~i~d~~~l~~~g~d---~k~-ia~~~~~~ 276 (517)
T COG0661 208 YRREAANAERFRENFKDDPDVYVPKVYWEYT-------TRRVLTMEWIDGIKISDIAALKSAGID---RKE-LAELLVRA 276 (517)
T ss_pred HHHHHHHHHHHHHHcCCCCCeEeceeehhcc-------CCcEEEEEeeCCEecccHHHHHhcCCC---HHH-HHHHHHHH
Confidence 344555555543 222233333332211 24589999993 57665 4443332 122 21112222
Q ss_pred HHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCC
Q 004157 138 AKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (771)
Q Consensus 138 ~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~ 181 (771)
.----| + .|+.|+|.+|.||+|+.+|.+.+.|||+......
T Consensus 277 f~~q~~-~--dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 277 FLRQLL-R--DGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred HHHHHH-h--cCccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 211112 2 4799999999999999999999999999876643
|
|
| >KOG1235 consensus Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00019 Score=82.49 Aligned_cols=136 Identities=12% Similarity=0.111 Sum_probs=84.2
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc--------------------------------------h-hHHHH
Q 004157 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ--------------------------------------D-GHLAA 65 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~--------------------------------------~-~~~~~ 65 (771)
.|+..+ + .||+|+.+. |+.|+||+-+..-.. + .....
T Consensus 168 piaaASla--QVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~E 244 (538)
T KOG1235|consen 168 PIAAASLA--QVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKE 244 (538)
T ss_pred hhhhcchh--heEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHH
Confidence 445444 6 999999885 999999997732100 0 11233
Q ss_pred HHHHHHHHhcCCCCC------eeEEeeeEEecccCcCCcccEEEEEecCCc--chH--HHHHHhCCCCCCcHHHHHHHHH
Q 004157 66 ARNGVKRLRTVRHPN------ILAFLHSTEVENIDATSTKITIYIVTEPVM--PLS--EKIKELGLEGSQRDEYYAWGLN 135 (771)
Q Consensus 66 ~~~ei~~Lk~LrHPn------Ilkv~d~~e~e~~d~~~~~~~iyIVtE~v~--~L~--~~L~~~~~~~~~~~~~i~~gl~ 135 (771)
++|.-+..+.++|-+ |.++|-.+. +.-.++||||. ++. +.|++.+.... + |..-+.
T Consensus 245 A~Nae~~~~~f~~~~~~~~V~VP~Vy~~~s----------t~RVLtME~~~G~~i~Dl~~i~~~gi~~~---~-i~~~l~ 310 (538)
T KOG1235|consen 245 AKNAERFRENFKDFSLLTYVLVPKVYWDLS----------TKRVLTMEYVDGIKINDLDAIDKRGISPH---D-ILNKLV 310 (538)
T ss_pred HHhHHHHHHHHHhcccccceeCCeehhhcC----------cceEEEEEecCCccCCCHHHHHHcCCCHH---H-HHHHHH
Confidence 445555555556666 444554332 25699999993 332 56666655322 2 211122
Q ss_pred HHHHHHHHHHcCCCceecCCCCCCEEEcC----CCcEEEEccCcccccCC
Q 004157 136 QIAKAVSFLNNDCKLVHGNVCLSSVVVTQ----TLDWKLHAFDVLSEFDG 181 (771)
Q Consensus 136 QI~~aL~fLH~~~~ivH~dIkp~NI~v~~----~G~~KL~dFgla~~~~~ 181 (771)
+...-+-|. .|++|+|=+|.||+|+. ++++.|-|||+......
T Consensus 311 ~~~~~qIf~---~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~ 357 (538)
T KOG1235|consen 311 EAYLEQIFK---TGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH 357 (538)
T ss_pred HHHHHHHHh---cCCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence 322223333 36999999999999994 67899999999876643
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00037 Score=83.74 Aligned_cols=252 Identities=20% Similarity=0.244 Sum_probs=171.1
Q ss_pred hHHHHHHHhc--cCCCCCCChHHHhhCCCCCcc---hhhhhhhhhhhhccCCh-hhHHhhhhhchhhh---cCCCh---h
Q 004157 256 LLPDYQRLLS--SMPSRRLNSSKLIENSEYFQN---KLVDTIHFMEILNLKDS-VEKDTFFRKLPNLA---EQLPR---Q 323 (771)
Q Consensus 256 l~~~i~~lL~--~~P~~Rps~~~lL~~~~fF~n---~lv~~~~~L~~l~~k~~-~eK~~F~~~L~~~l---~~fP~---~ 323 (771)
+...+..|+. .-+..+..+-++|++..-|-+ .+-+.+-|+--+..... .-+..-+..|.+.+ ..+|+ .
T Consensus 423 ~vs~lts~IR~lk~~~tK~~ALeLl~~lS~~i~de~~LDRVlPY~v~l~~Ds~a~Vra~Al~Tlt~~L~~Vr~~~~~dan 502 (1431)
T KOG1240|consen 423 FVSVLTSCIRALKTIQTKLAALELLQELSTYIDDEVKLDRVLPYFVHLLMDSEADVRATALETLTELLALVRDIPPSDAN 502 (1431)
T ss_pred eHHHHHHHHHhhhcchhHHHHHHHHHHHhhhcchHHHHhhhHHHHHHHhcCchHHHHHHHHHHHHHHHhhccCCCcccch
Confidence 4455555554 234556666677776544422 23344555555544433 33555566555544 34554 5
Q ss_pred hhhhhhHHHHHHHHhcCCCC------chhhHHH-------HHhccC--------------CChhhhh-------hhhHHH
Q 004157 324 IVLKKLLPLLASALEFGSAA------APALTAL-------LKMGSW--------------LSTEEFS-------VKVLPT 369 (771)
Q Consensus 324 ~~~~kILP~Ll~~~~~~~~~------~~~L~~l-------l~i~~~--------------l~~eef~-------~~i~P~ 369 (771)
++..-|+|.|........+. +..|.-+ +..+.. ...+.|. ..|-..
T Consensus 503 iF~eYlfP~L~~l~~d~~~~~vRiayAsnla~LA~tA~rFle~~q~~~~~g~~n~~nset~~~~~~~~~~~~L~~~V~~~ 582 (1431)
T KOG1240|consen 503 IFPEYLFPHLNHLLNDSSAQIVRIAYASNLAQLAKTAYRFLELTQELRQAGMLNDPNSETAPEQNYNTELQALHHTVEQM 582 (1431)
T ss_pred hhHhhhhhhhHhhhccCccceehhhHHhhHHHHHHHHHHHHHHHHHHHhcccccCcccccccccccchHHHHHHHHHHHH
Confidence 77788999998877653221 1112111 111111 1111122 224445
Q ss_pred HHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHHHHHH
Q 004157 370 IVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLS 449 (771)
Q Consensus 370 i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL~~la 449 (771)
+..|...++.-||.+||+++-.+...+.++--+|-|++++++-+.|++..+|.+-..+|..++-.++.+.+...|||+|.
T Consensus 583 v~sLlsd~~~~Vkr~Lle~i~~LC~FFGk~ksND~iLshLiTfLNDkDw~LR~aFfdsI~gvsi~VG~rs~seyllPLl~ 662 (1431)
T KOG1240|consen 583 VSSLLSDSPPIVKRALLESIIPLCVFFGKEKSNDVILSHLITFLNDKDWRLRGAFFDSIVGVSIFVGWRSVSEYLLPLLQ 662 (1431)
T ss_pred HHHHHcCCchHHHHHHHHHHHHHHHHhhhcccccchHHHHHHHhcCccHHHHHHHHhhccceEEEEeeeeHHHHHHHHHH
Confidence 56677788889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCCCCcchhhHHHHHHHhhhc--cCc-----------------c--hhhHHh--HHHHHHhhhcCCCcchhhheeee
Q 004157 450 KLQVDEEPAIRTNTTILLGNIASH--LNE-----------------G--TRKRVL--INAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 450 klq~D~~~~IRtnt~icl~kia~~--L~~-----------------~--~~~~vL--~~af~~~~lkD~f~~~R~a~l~a 506 (771)
.-.+|.+..|=.+++-||.-|.+. |.| + .|..++ |.+.. +.|.+-.+.|.++.+..
T Consensus 663 Q~ltD~EE~Viv~aL~~ls~Lik~~ll~K~~v~~i~~~v~PlL~hPN~WIR~~~~~iI~~~~-~~ls~advyc~l~P~ir 741 (1431)
T KOG1240|consen 663 QGLTDGEEAVIVSALGSLSILIKLGLLRKPAVKDILQDVLPLLCHPNLWIRRAVLGIIAAIA-RQLSAADVYCKLMPLIR 741 (1431)
T ss_pred HhccCcchhhHHHHHHHHHHHHHhcccchHHHHHHHHhhhhheeCchHHHHHHHHHHHHHHH-hhhhhhhheEEeehhhH
Confidence 999999999999998888766542 111 1 244443 55666 67888888888888777
Q ss_pred cc
Q 004157 507 SY 508 (771)
Q Consensus 507 ~~ 508 (771)
-|
T Consensus 742 pf 743 (1431)
T KOG1240|consen 742 PF 743 (1431)
T ss_pred Hh
Confidence 33
|
|
| >PRK09687 putative lyase; Provisional | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00062 Score=72.81 Aligned_cols=129 Identities=17% Similarity=0.159 Sum_probs=79.7
Q ss_pred hhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhh-cCCCcHHHHHHHHHHHHhhccCCChhHHhH
Q 004157 364 VKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATG-FADTSAFLREMTLKSMLVLAPKLSQRTISG 442 (771)
Q Consensus 364 ~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~g-f~D~~~~iRe~tlk~i~~l~~kL~~~~l~~ 442 (771)
..+++.+.+++.+.|+.+|.....-|-.+...-. ....++|.|... ++|.++.||..++.++-.+...-... ..
T Consensus 53 ~~~~~~l~~ll~~~d~~vR~~A~~aLg~lg~~~~---~~~~a~~~L~~l~~~D~d~~VR~~A~~aLG~~~~~~~~~--~~ 127 (280)
T PRK09687 53 QDVFRLAIELCSSKNPIERDIGADILSQLGMAKR---CQDNVFNILNNLALEDKSACVRASAINATGHRCKKNPLY--SP 127 (280)
T ss_pred chHHHHHHHHHhCCCHHHHHHHHHHHHhcCCCcc---chHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccccccc--ch
Confidence 4566667777777777777776666655443111 134566776654 67777777777777776654322211 23
Q ss_pred HHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCCcchhhheeee
Q 004157 443 SLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 443 ~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R~a~l~a 506 (771)
.++..+..+..|+++.||..++..||+|.. .--++++. +.|+|+.+.+|.+|+++
T Consensus 128 ~a~~~l~~~~~D~~~~VR~~a~~aLg~~~~--------~~ai~~L~-~~L~d~~~~VR~~A~~a 182 (280)
T PRK09687 128 KIVEQSQITAFDKSTNVRFAVAFALSVIND--------EAAIPLLI-NLLKDPNGDVRNWAAFA 182 (280)
T ss_pred HHHHHHHHHhhCCCHHHHHHHHHHHhccCC--------HHHHHHHH-HHhcCCCHHHHHHHHHH
Confidence 455556566667777777777777766531 22456666 67777777777777777
|
|
| >PRK09687 putative lyase; Provisional | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00098 Score=71.33 Aligned_cols=127 Identities=14% Similarity=0.129 Sum_probs=94.9
Q ss_pred hhhhHHHHHHh-hcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHh
Q 004157 363 SVKVLPTIVKL-FASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTIS 441 (771)
Q Consensus 363 ~~~i~P~i~~l-F~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~ 441 (771)
...++|.|..+ ...+|..||.....-|-.+...-. .....++..+...+.|.++.||..++.++. ++..
T Consensus 88 ~~~a~~~L~~l~~~D~d~~VR~~A~~aLG~~~~~~~--~~~~~a~~~l~~~~~D~~~~VR~~a~~aLg----~~~~---- 157 (280)
T PRK09687 88 QDNVFNILNNLALEDKSACVRASAINATGHRCKKNP--LYSPKIVEQSQITAFDKSTNVRFAVAFALS----VIND---- 157 (280)
T ss_pred hHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccccc--ccchHHHHHHHHHhhCCCHHHHHHHHHHHh----ccCC----
Confidence 34678888877 678899999888776655432221 123456788889999999999999999984 3333
Q ss_pred HHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCCcchhhheeee
Q 004157 442 GSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 442 ~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R~a~l~a 506 (771)
.+.++.|..+..|+++.||.+++..||+|.. + ..-.++++. ++|.|+...+|.+|+.+
T Consensus 158 ~~ai~~L~~~L~d~~~~VR~~A~~aLg~~~~----~--~~~~~~~L~-~~L~D~~~~VR~~A~~a 215 (280)
T PRK09687 158 EAAIPLLINLLKDPNGDVRNWAAFALNSNKY----D--NPDIREAFV-AMLQDKNEEIRIEAIIG 215 (280)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHhcCCC----C--CHHHHHHHH-HHhcCCChHHHHHHHHH
Confidence 3455666666679999999999999999921 1 123467777 89999999999999999
|
|
| >PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY) | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00068 Score=69.22 Aligned_cols=144 Identities=10% Similarity=0.046 Sum_probs=80.4
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHH------HHHHHHHHHhcCCCCCeeEEeeeEE
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLA------AARNGVKRLRTVRHPNILAFLHSTE 89 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~------~~~~ei~~Lk~LrHPnIlkv~d~~e 89 (771)
+..|++.+.+.... . .|..- .-+|..+.+|......... .... .+.+.+..+.+++.-++..+.+.+.
T Consensus 30 ~~~~~~~kv~k~~~r~--~ValI--ei~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl 105 (229)
T PF06176_consen 30 DNNYKIIKVFKNTKRN--YVALI--EIDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYL 105 (229)
T ss_pred hCCceEEEeecCCCcc--EEEEE--EECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCcccccccee
Confidence 44566655554433 3 23333 2357888888876433221 1111 1344555556665444433333211
Q ss_pred ecccCcCCcccEEEEEecCCc--chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCc
Q 004157 90 VENIDATSTKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD 167 (771)
Q Consensus 90 ~e~~d~~~~~~~iyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~ 167 (771)
....-...-....+++|||+. +|.+...- .+ .+ .-.|..++.-||. .|++|||.+|.|++++.+|
T Consensus 106 ~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~i-------~e-~~---~~ki~~~ikqlH~-~G~~HGD~hpgNFlv~~~~- 172 (229)
T PF06176_consen 106 AAEKKIFRYTSSYVLLMEYIEGVELNDIEDI-------DE-DL---AEKIVEAIKQLHK-HGFYHGDPHPGNFLVSNNG- 172 (229)
T ss_pred eeeeeeccceeEEEEEEEEecCeecccchhc-------CH-HH---HHHHHHHHHHHHH-cCCccCCCCcCcEEEECCc-
Confidence 111000000234568999993 45543211 01 12 3567788999996 9999999999999998555
Q ss_pred EEEEccCcccc
Q 004157 168 WKLHAFDVLSE 178 (771)
Q Consensus 168 ~KL~dFgla~~ 178 (771)
+++.||+..+.
T Consensus 173 i~iID~~~k~~ 183 (229)
T PF06176_consen 173 IRIIDTQGKRM 183 (229)
T ss_pred EEEEECccccc
Confidence 99999987543
|
The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process |
| >PTZ00429 beta-adaptin; Provisional | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00098 Score=79.98 Aligned_cols=135 Identities=13% Similarity=0.173 Sum_probs=104.8
Q ss_pred hhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHH
Q 004157 365 KVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSL 444 (771)
Q Consensus 365 ~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~L 444 (771)
.+.|.+++++.++|-.+|-+..-++..|.+.-+... --....|.+-+.|.++.||..+|+.|.. |....+...+
T Consensus 68 ~LF~dVvk~~~S~d~elKKLvYLYL~~ya~~~pela--lLaINtl~KDl~d~Np~IRaLALRtLs~----Ir~~~i~e~l 141 (746)
T PTZ00429 68 YLFVDVVKLAPSTDLELKKLVYLYVLSTARLQPEKA--LLAVNTFLQDTTNSSPVVRALAVRTMMC----IRVSSVLEYT 141 (746)
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHcccChHHH--HHHHHHHHHHcCCCCHHHHHHHHHHHHc----CCcHHHHHHH
Confidence 367778889999998888777767777765444322 1257788999999999999999998864 4567778888
Q ss_pred HHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCCcchhhheeee
Q 004157 445 LKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 445 L~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R~a~l~a 506 (771)
++.+.+...|..|.||.++++|+.||-..-..-....-+++-+. .+|.|..+-+...|+.+
T Consensus 142 ~~~lkk~L~D~~pYVRKtAalai~Kly~~~pelv~~~~~~~~L~-~LL~D~dp~Vv~nAl~a 202 (746)
T PTZ00429 142 LEPLRRAVADPDPYVRKTAAMGLGKLFHDDMQLFYQQDFKKDLV-ELLNDNNPVVASNAAAI 202 (746)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHhhCcccccccchHHHHH-HHhcCCCccHHHHHHHH
Confidence 99999999999999999999999998654332222334677777 78999999999888887
|
|
| >PF12717 Cnd1: non-SMC mitotic condensation complex subunit 1 | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00064 Score=67.78 Aligned_cols=148 Identities=15% Similarity=0.231 Sum_probs=110.6
Q ss_pred cHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHHHHHHhhccCCCC
Q 004157 378 DRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEP 457 (771)
Q Consensus 378 Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL~~laklq~D~~~ 457 (771)
++.||-.++.-+-.++-+.+. +-+...|.++..|.|.++.||..|+..+.+++-. +.-.+++.++..+.++-.|+++
T Consensus 1 ~~~vR~n~i~~l~DL~~r~~~--~ve~~~~~l~~~L~D~~~~VR~~al~~Ls~Li~~-d~ik~k~~l~~~~l~~l~D~~~ 77 (178)
T PF12717_consen 1 DPSVRNNAIIALGDLCIRYPN--LVEPYLPNLYKCLRDEDPLVRKTALLVLSHLILE-DMIKVKGQLFSRILKLLVDENP 77 (178)
T ss_pred CHHHHHHHHHHHHHHHHhCcH--HHHhHHHHHHHHHCCCCHHHHHHHHHHHHHHHHc-CceeehhhhhHHHHHHHcCCCH
Confidence 467898899999888888875 4677899999999999999999999999998854 4445577887888888899999
Q ss_pred cchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCCcch--------hhheeee---ccCCHHHHHHHHHHHHHHHH
Q 004157 458 AIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPA--------RGAAKIL---SYLNCDVRSKAFQAVDQFLQ 526 (771)
Q Consensus 458 ~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~--------R~a~l~a---~~~~~~VR~~a~~~~~~~l~ 526 (771)
.||..+..|+..++...+++....++...+. .|.+..-+. +-.-++. .|-++ =.+.+.+++.+.+
T Consensus 78 ~Ir~~A~~~~~e~~~~~~~~~i~~~~~e~i~--~l~~~~~~~~~~~~~~~~~~~I~~fll~~i~~--d~~~~~l~~kl~~ 153 (178)
T PF12717_consen 78 EIRSLARSFFSELLKKRNPNIIYNNFPELIS--SLNNCYEHPVYGPLSREKRKKIYKFLLDFIDK--DKQKESLVEKLCQ 153 (178)
T ss_pred HHHHHHHHHHHHHHHhccchHHHHHHHHHHH--HHhCccccccccccCHHHHHHHHHHHHHHcCc--HHHHHHHHHHHHH
Confidence 9999999999999999988888888877777 344432111 1111111 12111 2456677777777
Q ss_pred HHHHHH
Q 004157 527 IVKQYH 532 (771)
Q Consensus 527 ~l~~~~ 532 (771)
++..+.
T Consensus 154 ~~~~~~ 159 (178)
T PF12717_consen 154 RFLNAV 159 (178)
T ss_pred HHHHHc
Confidence 776654
|
|
| >PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ] | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0023 Score=66.16 Aligned_cols=150 Identities=17% Similarity=0.243 Sum_probs=99.0
Q ss_pred HHHHHhhcCCcHHHHHHHHHhHHHHHhhcChh--hhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCC-hhHHhHHH
Q 004157 368 PTIVKLFASNDRAIRVALLQHIDQYGQSFSAQ--VVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLS-QRTISGSL 444 (771)
Q Consensus 368 P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~--~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~-~~~l~~~L 444 (771)
..|.+...+.--.|-...+.-+..+..++... .+-+.++|.++.-+.|+...||+.+...+..++...+ ...+ +
T Consensus 56 ~~i~~~l~d~Rs~v~~~A~~~l~~l~~~l~~~~~~~~~~~l~~Ll~~~~~~~~~i~~~a~~~L~~i~~~~~~~~~~---~ 132 (228)
T PF12348_consen 56 DAIIKQLSDLRSKVSKTACQLLSDLARQLGSHFEPYADILLPPLLKKLGDSKKFIREAANNALDAIIESCSYSPKI---L 132 (228)
T ss_dssp HHHHH-S-HH---HHHHHHHHHHHHHHHHGGGGHHHHHHHHHHHHHGGG---HHHHHHHHHHHHHHHTTS-H--HH---H
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHCCcHHHH---H
Confidence 44444433222245555566666666666655 2356799999999999999999999999999999888 2321 3
Q ss_pred HHHHHhhccCCCCcchhhHHHHHHHhhhccC--cc-hh----hHHhHHHHHHhhhcCCCcchhhheeeeccCCHHHHHHH
Q 004157 445 LKYLSKLQVDEEPAIRTNTTILLGNIASHLN--EG-TR----KRVLINAFTVRALRDTFSPARGAAKILSYLNCDVRSKA 517 (771)
Q Consensus 445 L~~laklq~D~~~~IRtnt~icl~kia~~L~--~~-~~----~~vL~~af~~~~lkD~f~~~R~a~l~a~~~~~~VR~~a 517 (771)
++.+.....+..+.+|.-++.||..+....+ .. .. .+.|++++. +.+.|+. .+||..|
T Consensus 133 ~~~l~~~~~~Kn~~vR~~~~~~l~~~l~~~~~~~~~l~~~~~~~~l~~~l~-~~l~D~~--------------~~VR~~A 197 (228)
T PF12348_consen 133 LEILSQGLKSKNPQVREECAEWLAIILEKWGSDSSVLQKSAFLKQLVKALV-KLLSDAD--------------PEVREAA 197 (228)
T ss_dssp HHHHHHHTT-S-HHHHHHHHHHHHHHHTT-----GGG--HHHHHHHHHHHH-HHHTSS---------------HHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHccchHhhhcccchHHHHHHHHH-HHCCCCC--------------HHHHHHH
Confidence 6777778889999999999999999999888 22 11 245889999 8999987 5688888
Q ss_pred HHHHHHHHHHHHHHHhhc
Q 004157 518 FQAVDQFLQIVKQYHEKT 535 (771)
Q Consensus 518 ~~~~~~~l~~l~~~~~~~ 535 (771)
+++|..|.+...+-++.+
T Consensus 198 r~~~~~l~~~~~~~a~~~ 215 (228)
T PF12348_consen 198 RECLWALYSHFPERAESI 215 (228)
T ss_dssp HHHHHHHHHHH-HHH---
T ss_pred HHHHHHHHHHCCHhhccc
Confidence 888888887777766654
|
The domain is also found in other proteins involved in microtubule binding, including STU1, MOR1 and spindle pole body component Alp14.; PDB: 2QK2_A. |
| >PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0016 Score=75.91 Aligned_cols=134 Identities=16% Similarity=0.215 Sum_probs=93.6
Q ss_pred hhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHH
Q 004157 365 KVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSL 444 (771)
Q Consensus 365 ~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~L 444 (771)
...+.++++..++|..+|-..--.+..|.+.=+. +---+...+..-+.+.++.+|..+|+.+..+. ...+...+
T Consensus 42 ~~~~~vi~l~~s~~~~~Krl~yl~l~~~~~~~~~--~~~l~~n~l~kdl~~~n~~~~~lAL~~l~~i~----~~~~~~~l 115 (526)
T PF01602_consen 42 FLFMEVIKLISSKDLELKRLGYLYLSLYLHEDPE--LLILIINSLQKDLNSPNPYIRGLALRTLSNIR----TPEMAEPL 115 (526)
T ss_dssp STHHHHHCTCSSSSHHHHHHHHHHHHHHTTTSHH--HHHHHHHHHHHHHCSSSHHHHHHHHHHHHHH-----SHHHHHHH
T ss_pred hHHHHHHHHhCCCCHHHHHHHHHHHHHHhhcchh--HHHHHHHHHHHhhcCCCHHHHHHHHhhhhhhc----ccchhhHH
Confidence 4456666666666665553333333333333222 12226677777888888888888888888776 55556778
Q ss_pred HHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCCcchhhheeee
Q 004157 445 LKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 445 L~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R~a~l~a 506 (771)
++.+.++..|+.+.||-++++|+.+|...-....... +++.+. ++|+|+.+.++.+|+.+
T Consensus 116 ~~~v~~ll~~~~~~VRk~A~~~l~~i~~~~p~~~~~~-~~~~l~-~lL~d~~~~V~~~a~~~ 175 (526)
T PF01602_consen 116 IPDVIKLLSDPSPYVRKKAALALLKIYRKDPDLVEDE-LIPKLK-QLLSDKDPSVVSAALSL 175 (526)
T ss_dssp HHHHHHHHHSSSHHHHHHHHHHHHHHHHHCHCCHHGG-HHHHHH-HHTTHSSHHHHHHHHHH
T ss_pred HHHHHHHhcCCchHHHHHHHHHHHHHhccCHHHHHHH-HHHHHh-hhccCCcchhHHHHHHH
Confidence 8888888888888888888888888888754444445 788888 88888888888888877
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. Clathrin coats contain both clathrin and adaptor complexes that link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. The two major types of clathrin adaptor complexes are the heterotetrameric adaptor protein (AP) complexes, and the monomeric GGA (Golgi-localising, Gamma-adaptin ear domain homology, ARF-binding proteins) adaptors []. All AP complexes are heterotetramers composed of two large subunits (adaptins), a medium subunit (mu) and a small subunit (sigma). Each subunit has a specific function. Adaptin subunits recognise and bind to clathrin through their hinge region (clathrin box), and recruit accessory proteins that modulate AP function through their C-terminal appendage domains. By contrast, GGAs are monomers composed of four domains, which have functions similar to AP subunits: an N-terminal VHS (Vps27p/Hrs/Stam) domain, a GAT (GGA and Tom1) domain, a hinge region, and a C-terminal GAE (gamma-adaptin ear) domain. The GAE domain is similar to the AP gamma-adaptin ear domain, being responsible for the recruitment of accessory proteins that regulate clathrin-mediated endocytosis []. While clathrin mediates endocytic protein transport from ER to Golgi, coatomers (COPI, COPII) primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the N-terminal domain of various adaptins from different AP clathrin adaptor complexes (including AP1, AP2, AP3 and AP4), and from the beta and gamma subunits of various coatomer (COP) adaptors. This domain has a 2-layer alpha/alpha fold that forms a right-handed superhelix, and is a member of the ARM repeat superfamily []. The N-terminal region of the various AP adaptor proteins share strong sequence identity; by contrast, the C-terminal domains of different adaptins share similar structural folds, but have little sequence identity []. It has been proposed that the N-terminal domain interacts with another uniform component of the coated vesicles. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 1W63_C 2JKR_A 2JKT_A 2XA7_A 2VGL_B 3TJZ_E. |
| >KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00084 Score=72.59 Aligned_cols=138 Identities=16% Similarity=0.206 Sum_probs=89.9
Q ss_pred cCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCC------------------------CCchhHHHHHHHHHHHHhcCCC
Q 004157 24 GDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGT------------------------NAQDGHLAAARNGVKRLRTVRH 78 (771)
Q Consensus 24 ~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~------------------------~~~~~~~~~~~~ei~~Lk~LrH 78 (771)
...|..|- . .||.++. .+|+.+|||+|.-+ +......--+..|++.|++|+.
T Consensus 149 nGCiSTGKEA--NVYHat~-~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~ 225 (520)
T KOG2270|consen 149 NGCISTGKEA--NVYHATE-EDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNN 225 (520)
T ss_pred ccccccCccc--eeEeeec-CCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHh
Confidence 33455554 5 7999985 48889999999832 1111223346789999999987
Q ss_pred CCeeEEeeeEEecccCcCCcccEEEEEecCCcc---hHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCC
Q 004157 79 PNILAFLHSTEVENIDATSTKITIYIVTEPVMP---LSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNV 155 (771)
Q Consensus 79 PnIlkv~d~~e~e~~d~~~~~~~iyIVtE~v~~---L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dI 155 (771)
-+ +.+-+.+... .-.|||++++- -.-.|+...+......+. -.|++.-+.-|-+.|++||.||
T Consensus 226 aG-IP~PePIlLk---------~hVLVM~FlGrdgw~aPkLKd~~ls~~ka~~~----Y~~~v~~MR~lY~~c~LVHADL 291 (520)
T KOG2270|consen 226 AG-IPCPEPILLK---------NHVLVMEFLGRDGWAAPKLKDASLSTSKAREL----YQQCVRIMRRLYQKCRLVHADL 291 (520)
T ss_pred cC-CCCCCceeee---------cceEeeeeccCCCCcCcccccccCChHHHHHH----HHHHHHHHHHHHHHhceeccch
Confidence 77 4444444432 34799999951 222344444332222222 3466677777777899999999
Q ss_pred CCCCEEEcCCCcEEEEccCccccc
Q 004157 156 CLSSVVVTQTLDWKLHAFDVLSEF 179 (771)
Q Consensus 156 kp~NI~v~~~G~~KL~dFgla~~~ 179 (771)
+--|+++ .+|.+.++|.+-+...
T Consensus 292 SEfN~Ly-hdG~lyiIDVSQSVE~ 314 (520)
T KOG2270|consen 292 SEFNLLY-HDGKLYIIDVSQSVEH 314 (520)
T ss_pred hhhhheE-ECCEEEEEEccccccC
Confidence 9999999 5667888887765443
|
|
| >TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172 | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0017 Score=67.37 Aligned_cols=134 Identities=10% Similarity=0.053 Sum_probs=75.5
Q ss_pred CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCC--eeEEeeeEEecccCcCCcccE
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPN--ILAFLHSTEVENIDATSTKIT 101 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPn--Ilkv~d~~e~e~~d~~~~~~~ 101 (771)
++|+.|. + .||+. .|..+.+|.+.... ....+++|++.++.+..-+ +.+++++.+.. ..
T Consensus 7 ~~i~~G~t~--~~y~~----~~~~~VlR~~~~~~----~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~--------~~ 68 (226)
T TIGR02172 7 TQTGEGGNG--ESYTH----KTGKWMLKLYNPGF----DKETIKREFDASRKVFSLGIPTPHPFDLVEDG--------GR 68 (226)
T ss_pred eeecCCCCc--ceeEe----cCCCEEEEeCCCCC----CHHHHHHHHHHHHHHHHcCCCCCceEEEEecC--------Ce
Confidence 3567776 5 67863 25567788876422 2234688999999886433 46667666543 25
Q ss_pred EEEEecCC-c-c-hH--------------HHHHH----hC---CCCCCcHHHHHHH---HH-------HHHH-HHHHHH-
Q 004157 102 IYIVTEPV-M-P-LS--------------EKIKE----LG---LEGSQRDEYYAWG---LN-------QIAK-AVSFLN- 145 (771)
Q Consensus 102 iyIVtE~v-~-~-L~--------------~~L~~----~~---~~~~~~~~~i~~g---l~-------QI~~-aL~fLH- 145 (771)
.++|||++ + + +. ..+.+ .. ............. +. .+.. ...+|.
T Consensus 69 ~glv~e~i~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~ 148 (226)
T TIGR02172 69 LGLIYELIVGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKE 148 (226)
T ss_pred eeeeeeecCCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHh
Confidence 68899998 3 2 11 11111 11 0111100100000 00 0111 122222
Q ss_pred --cCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 146 --NDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 146 --~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
....++|||++|.||+++++| ..++||+.+.
T Consensus 149 ~~~~~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 149 VPDTSTCLHGDFQIGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred CCCCCceEecCCCCCcEEEcCCC-cEEEechhcC
Confidence 123578999999999999988 9999999875
|
This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636. |
| >PF12755 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0014 Score=58.35 Aligned_cols=67 Identities=13% Similarity=0.276 Sum_probs=57.4
Q ss_pred ChhhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhh--hhccHHHHHhhcCCCcHHHHHHH
Q 004157 358 STEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVV--DEQVYPHVATGFADTSAFLREMT 424 (771)
Q Consensus 358 ~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v--~~~I~p~l~~gf~D~~~~iRe~t 424 (771)
...+|.+.|+|.|..+|.++|++||++.+|.|-.+.+....+.+ -++||..++..+.|.++.||..+
T Consensus 20 ~~~~~l~~Il~pVL~~~~D~d~rVRy~AcEaL~ni~k~~~~~~l~~f~~IF~~L~kl~~D~d~~Vr~~a 88 (97)
T PF12755_consen 20 DISKYLDEILPPVLKCFDDQDSRVRYYACEALYNISKVARGEILPYFNEIFDALCKLSADPDENVRSAA 88 (97)
T ss_pred hHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHH
Confidence 36889999999999999999999999999999999988877664 34588888888899988888864
|
|
| >PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ] | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0034 Score=64.89 Aligned_cols=117 Identities=22% Similarity=0.309 Sum_probs=91.2
Q ss_pred hhhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhcc-HHHHHhhcCCCcHHHHHHHHHHHHhhccCCC-
Q 004157 359 TEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQV-YPHVATGFADTSAFLREMTLKSMLVLAPKLS- 436 (771)
Q Consensus 359 ~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I-~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~- 436 (771)
-+.|...++|.|++.++.....||-...+-|..++.+.+ +..++ ++.+..|+.+.++.+|+.++.-+..++...+
T Consensus 88 ~~~~~~~~l~~Ll~~~~~~~~~i~~~a~~~L~~i~~~~~---~~~~~~~~~l~~~~~~Kn~~vR~~~~~~l~~~l~~~~~ 164 (228)
T PF12348_consen 88 FEPYADILLPPLLKKLGDSKKFIREAANNALDAIIESCS---YSPKILLEILSQGLKSKNPQVREECAEWLAIILEKWGS 164 (228)
T ss_dssp GHHHHHHHHHHHHHGGG---HHHHHHHHHHHHHHHTTS----H--HHHHHHHHHHTT-S-HHHHHHHHHHHHHHHTT---
T ss_pred HHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHCC---cHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHccc
Confidence 466778899999999999988999999999999999988 22334 8899999999999999999999999999998
Q ss_pred -hhHH-----hHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcch
Q 004157 437 -QRTI-----SGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGT 478 (771)
Q Consensus 437 -~~~l-----~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~ 478 (771)
...+ ...+++.|.++-.|.++.||..+-.|+..+..+.++..
T Consensus 165 ~~~~l~~~~~~~~l~~~l~~~l~D~~~~VR~~Ar~~~~~l~~~~~~~a 212 (228)
T PF12348_consen 165 DSSVLQKSAFLKQLVKALVKLLSDADPEVREAARECLWALYSHFPERA 212 (228)
T ss_dssp --GGG--HHHHHHHHHHHHHHHTSS-HHHHHHHHHHHHHHHHHH-HHH
T ss_pred hHhhhcccchHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHhh
Confidence 2222 35699999999999999999999999999988887643
|
The domain is also found in other proteins involved in microtubule binding, including STU1, MOR1 and spindle pole body component Alp14.; PDB: 2QK2_A. |
| >cd05150 APH Aminoglycoside 3'-phosphotransferase (APH) | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0064 Score=63.42 Aligned_cols=137 Identities=14% Similarity=0.156 Sum_probs=75.9
Q ss_pred CCCCCCCceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccCcCCcccEEEE
Q 004157 26 PYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDATSTKITIYI 104 (771)
Q Consensus 26 ~ig~G~g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d~~~~~~~iyI 104 (771)
.|..|.....||+.... +..+.||+..... ...+.+|++.++.|. +--+.++++.....+ .-++
T Consensus 5 ~~~~g~~~~~v~~~~~~--~~~~~vk~~~~~~-----~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~--------~~~l 69 (244)
T cd05150 5 RVTEGQSGATVYRLDGK--NPGLYLKIAPSGP-----TYELEREAERLRWLAGKLPVPEVIDYGSDDG--------RAWL 69 (244)
T ss_pred ecCCCCCcCeEEEEcCC--CCcEEEEecCCCc-----ccchHHHHHHHHHHHhcCCCCeEEEEEecCC--------ccEE
Confidence 34444422378888753 4678888865432 224567888888874 334667777665422 4689
Q ss_pred EecCC-c-chHHH----------------HHHhC-CC--CCC-c---HHHHHHHHH-------------------HHHHH
Q 004157 105 VTEPV-M-PLSEK----------------IKELG-LE--GSQ-R---DEYYAWGLN-------------------QIAKA 140 (771)
Q Consensus 105 VtE~v-~-~L~~~----------------L~~~~-~~--~~~-~---~~~i~~gl~-------------------QI~~a 140 (771)
|||++ + +|... +.... .. ... . ...+.+... .+...
T Consensus 70 v~e~i~G~~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (244)
T cd05150 70 LTSAVPGVPAAALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEEL 149 (244)
T ss_pred EEEeeCCccHhHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHH
Confidence 99999 3 33321 11111 10 000 0 000100000 01111
Q ss_pred HHHHHc------CCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 141 VSFLNN------DCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 141 L~fLH~------~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
+..|-. ...++|||+.|.||+++.++...|+||+.+.
T Consensus 150 ~~~l~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~ 192 (244)
T cd05150 150 YAELEATRPAEEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLG 192 (244)
T ss_pred HHHHHhhCCCcCceEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence 222211 2359999999999999998878899999764
|
The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio |
| >PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.013 Score=72.81 Aligned_cols=53 Identities=15% Similarity=0.213 Sum_probs=28.9
Q ss_pred HHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHh
Q 004157 369 TIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLV 430 (771)
Q Consensus 369 ~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~ 430 (771)
.+..++..+|+.||...++-|..+... -...|+..+.|.++.||.++++++..
T Consensus 688 ~L~~~L~~~d~~VR~~A~~aL~~~~~~---------~~~~l~~~L~D~d~~VR~~Av~aL~~ 740 (897)
T PRK13800 688 ALRDHLGSPDPVVRAAALDVLRALRAG---------DAALFAAALGDPDHRVRIEAVRALVS 740 (897)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHhhccC---------CHHHHHHHhcCCCHHHHHHHHHHHhc
Confidence 444555566666666666555443210 01244556666666666666666654
|
|
| >PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0076 Score=74.95 Aligned_cols=134 Identities=17% Similarity=0.187 Sum_probs=98.2
Q ss_pred hHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHH
Q 004157 366 VLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLL 445 (771)
Q Consensus 366 i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL 445 (771)
.++.|...+.++|..||...++.|..+. ...++|.|...|.|.++.||..++.++..+...+....
T Consensus 622 ~~~~L~~~L~D~d~~VR~~Av~~L~~~~--------~~~~~~~L~~aL~D~d~~VR~~Aa~aL~~l~~~~~~~~------ 687 (897)
T PRK13800 622 SVAELAPYLADPDPGVRRTAVAVLTETT--------PPGFGPALVAALGDGAAAVRRAAAEGLRELVEVLPPAP------ 687 (897)
T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHhhhc--------chhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCchH------
Confidence 4567778888999999999998887764 24478899999999999999999999987765444321
Q ss_pred HHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCCcchhhheeee--cc------------CCH
Q 004157 446 KYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL--SY------------LNC 511 (771)
Q Consensus 446 ~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R~a~l~a--~~------------~~~ 511 (771)
.|..+..|+++.||...+-.|+++... . ...|. ++|+|+.+.+|.+|+.+ .. .+.
T Consensus 688 -~L~~~L~~~d~~VR~~A~~aL~~~~~~----~-----~~~l~-~~L~D~d~~VR~~Av~aL~~~~~~~~l~~~l~D~~~ 756 (897)
T PRK13800 688 -ALRDHLGSPDPVVRAAALDVLRALRAG----D-----AALFA-AALGDPDHRVRIEAVRALVSVDDVESVAGAATDENR 756 (897)
T ss_pred -HHHHHhcCCCHHHHHHHHHHHHhhccC----C-----HHHHH-HHhcCCCHHHHHHHHHHHhcccCcHHHHHHhcCCCH
Confidence 222223467888999888888886521 1 13456 78888888888888888 11 778
Q ss_pred HHHHHHHHHHHHH
Q 004157 512 DVRSKAFQAVDQF 524 (771)
Q Consensus 512 ~VR~~a~~~~~~~ 524 (771)
.||..|-+.|-.+
T Consensus 757 ~VR~~aa~aL~~~ 769 (897)
T PRK13800 757 EVRIAVAKGLATL 769 (897)
T ss_pred HHHHHHHHHHHHh
Confidence 8888888777544
|
|
| >PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0085 Score=61.14 Aligned_cols=139 Identities=15% Similarity=0.232 Sum_probs=74.1
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCC--eeEEeeeEEecccCcCCcccEE
Q 004157 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPN--ILAFLHSTEVENIDATSTKITI 102 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPn--Ilkv~d~~e~e~~d~~~~~~~i 102 (771)
.++.|. + .+|..+... ..+.+|..... .....+.+|...++.|...+ +.+++........ ....
T Consensus 4 ~l~~G~~n--~~~~v~~~~--~~~vlK~~~~~----~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~-----~~~~ 70 (239)
T PF01636_consen 4 PLSGGFSN--RVYRVTTDD--GRYVLKFYRPP----DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEF-----NGFP 70 (239)
T ss_dssp EEEESSSS--EEEEEEETT--SEEEEEEESSH----HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEE-----TSEE
T ss_pred cCCCCCee--eEEEEEECC--cEEEEEEeCCC----CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccc-----cccc
Confidence 455565 5 799998764 58989997642 24556778888888886333 4566654332221 2357
Q ss_pred EEEecCCc--chHH----------------HHHHhC-C--C--CCCc-H----H----HHHH-------H----HHHHHH
Q 004157 103 YIVTEPVM--PLSE----------------KIKELG-L--E--GSQR-D----E----YYAW-------G----LNQIAK 139 (771)
Q Consensus 103 yIVtE~v~--~L~~----------------~L~~~~-~--~--~~~~-~----~----~i~~-------g----l~QI~~ 139 (771)
|++||++. ++.. .+.... . . .... . . ...+ . +..+..
T Consensus 71 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (239)
T PF01636_consen 71 YLLMEYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEE 150 (239)
T ss_dssp EEEEEEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred eEEEEEeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHH
Confidence 99999982 3433 111110 0 0 0000 0 0 0000 0 111222
Q ss_pred -HHHHHH------cCCCceecCCCCCCEEEc-CCCcEEEEccCccc
Q 004157 140 -AVSFLN------NDCKLVHGNVCLSSVVVT-QTLDWKLHAFDVLS 177 (771)
Q Consensus 140 -aL~fLH------~~~~ivH~dIkp~NI~v~-~~G~~KL~dFgla~ 177 (771)
.+..++ ....++|||+++.||+++ .+|.+-|+||+.+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~ 196 (239)
T PF01636_consen 151 RLLQELEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG 196 (239)
T ss_dssp HHHHHHHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred HHHHHHHhhhccCCCcEEEEeccccccceeeeccceeEEEecccce
Confidence 233333 235799999999999999 66767899999864
|
; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B .... |
| >cd00020 ARM Armadillo/beta-catenin-like repeats | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0075 Score=54.76 Aligned_cols=108 Identities=19% Similarity=0.193 Sum_probs=86.9
Q ss_pred hhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhh---cChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChh--
Q 004157 364 VKVLPTIVKLFASNDRAIRVALLQHIDQYGQS---FSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQR-- 438 (771)
Q Consensus 364 ~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~---l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~-- 438 (771)
..++|.+..++...++.+|...+.-|..+... .....+...++|.++..+.|.++.+|+.++..+-.++..-...
T Consensus 6 ~~~i~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~ 85 (120)
T cd00020 6 AGGLPALVSLLSSSDENVQREAAWALSNLSAGNNDNIQAVVEAGGLPALVQLLKSEDEEVVKAALWALRNLAAGPEDNKL 85 (120)
T ss_pred cCChHHHHHHHHcCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCChHHHHHHHhCCCHHHHHHHHHHHHHHccCcHHHHH
Confidence 34788888888888888887777777777654 3445566689999999999999999999999999998765432
Q ss_pred -HHhHHHHHHHHhhccCCCCcchhhHHHHHHHhh
Q 004157 439 -TISGSLLKYLSKLQVDEEPAIRTNTTILLGNIA 471 (771)
Q Consensus 439 -~l~~~LL~~laklq~D~~~~IRtnt~icl~kia 471 (771)
.+++.+++.|.++..+.+..+|-..+-+|..|+
T Consensus 86 ~~~~~g~l~~l~~~l~~~~~~~~~~a~~~l~~l~ 119 (120)
T cd00020 86 IVLEAGGVPKLVNLLDSSNEDIQKNATGALSNLA 119 (120)
T ss_pred HHHHCCChHHHHHHHhcCCHHHHHHHHHHHHHhh
Confidence 344568999999988888999999999988875
|
An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, the junctional plaque protein plakoglobin, the adenomatous polyposis coli (APC) tumor suppressor protein, and a number of other proteins. ARM has been implicated in mediating protein-protein interactions, but no common features among the target proteins recognized by the ARM repeats have been identified; related to the HEAT domain; three consecutive copies of the repeat are represented by this alignment model. |
| >KOG1820 consensus Microtubule-associated protein [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.02 Score=69.08 Aligned_cols=189 Identities=14% Similarity=0.122 Sum_probs=132.3
Q ss_pred hhhccCChhhHHhhhhhchhhhcCCC--hhhhhhhhHHHHHHHHhcCCCCc---hhhHHHHHhccCCCh--hhhhhhhHH
Q 004157 296 EILNLKDSVEKDTFFRKLPNLAEQLP--RQIVLKKLLPLLASALEFGSAAA---PALTALLKMGSWLST--EEFSVKVLP 368 (771)
Q Consensus 296 ~~l~~k~~~eK~~F~~~L~~~l~~fP--~~~~~~kILP~Ll~~~~~~~~~~---~~L~~ll~i~~~l~~--eef~~~i~P 368 (771)
.++.-++-.++.+-+.++.+.+.+=. ..-...-++-.+++....+.... ..+..+=.|+..|.. ..|...+.|
T Consensus 260 t~~~s~~WK~R~Eale~l~~~l~e~~~~~~~~~~~ll~~~~ki~~kDaN~~v~~~aa~~l~~ia~~lr~~~~~~~~~v~p 339 (815)
T KOG1820|consen 260 TEMLSKKWKDRKEALEELVAILEEAKKEIVKGYTGLLGILLKIRLKDANINVVMLAAQILELIAKKLRPLFRKYAKNVFP 339 (815)
T ss_pred HhhhccchHHHHHHHHHHHHHHhccccccccCcchHHHHHHHHhccCcchhHHHHHHHHHHHHHHhcchhhHHHHHhhcc
Confidence 34444555555555555555555433 11222224444555444443222 223333345555543 568888999
Q ss_pred HHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCC----hhHHhHHH
Q 004157 369 TIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLS----QRTISGSL 444 (771)
Q Consensus 369 ~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~----~~~l~~~L 444 (771)
.|...|...-..+|=.|+.-++.+.. ....+.+.+.+..++.+.+|.+|..|..-+-....+++ ++-....+
T Consensus 340 ~lld~lkekk~~l~d~l~~~~d~~~n----s~~l~~~~~~I~e~lk~knp~~k~~~~~~l~r~~~~~~~~~~~~~t~~~l 415 (815)
T KOG1820|consen 340 SLLDRLKEKKSELRDALLKALDAILN----STPLSKMSEAILEALKGKNPQIKGECLLLLDRKLRKLGPKTVEKETVKTL 415 (815)
T ss_pred hHHHHhhhccHHHHHHHHHHHHHHHh----cccHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHhhcCCcCcchhhHHHH
Confidence 99999988888899999988888888 34466688899999999999999999888777777777 34457789
Q ss_pred HHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHH
Q 004157 445 LKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFT 488 (771)
Q Consensus 445 L~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~ 488 (771)
.|++.+..+|.+..||.++.-|++-+...+++....+.|....-
T Consensus 416 ~p~~~~~~~D~~~~VR~Aa~e~~~~v~k~~Ge~~~~k~L~~~~~ 459 (815)
T KOG1820|consen 416 VPHLIKHINDTDKDVRKAALEAVAAVMKVHGEEVFKKLLKDLDK 459 (815)
T ss_pred hHHHhhhccCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhcc
Confidence 99999999999999999999999999999998776665555543
|
|
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.0068 Score=73.99 Aligned_cols=200 Identities=17% Similarity=0.204 Sum_probs=120.8
Q ss_pred HHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHH
Q 004157 63 LAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKA 140 (771)
Q Consensus 63 ~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~a 140 (771)
+....-|+..+.+++|+|+..++.+-...-.. +-.+++..|+| .++...+...... ..+.......++.+|
T Consensus 226 i~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~----g~~~~v~~~~~s~~~~~~~~q~v~~i---~~~~~r~~~~~~~~G 298 (1351)
T KOG1035|consen 226 IQTTEIELESLSKIAHDNLGGYFVYGLERLFR----GIVLDVLQEICSKVELRSLLQSVGSI---PLETLRILHQKLLEG 298 (1351)
T ss_pred HHHHHHHHHHHHhhccccccceeEEeehhhcc----hHHHHHHHhhcCccchHHHHhhcccc---CHHHHHHHHHHHhhh
Confidence 44455678888999999999999886543211 11334556677 3566666654432 223333347799999
Q ss_pred HHHHHcCCCceecCCCCC---CEEEcCCCcEEEE--ccCcccccCCCCCCCCCCccccccccCCCCCChhcccccccccc
Q 004157 141 VSFLNNDCKLVHGNVCLS---SVVVTQTLDWKLH--AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVR 215 (771)
Q Consensus 141 L~fLH~~~~ivH~dIkp~---NI~v~~~G~~KL~--dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~ 215 (771)
|.++|. ..+.|.-+... ..-++..+....+ +|+.+....+... .........+.++|......
T Consensus 299 L~~~h~-~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~-------~~~~~~~~~~~~~e~~~~~~---- 366 (1351)
T KOG1035|consen 299 LAYLHS-LSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEK-------SFSDLLAEIRNADEDLKENT---- 366 (1351)
T ss_pred HHHHHH-hccceeEEecccccccccCccceeecchhhhcccccCCCccc-------chhhcCcccccccccccccc----
Confidence 999996 55555444444 2223344556666 7777666544221 11223334556666654321
Q ss_pred CCCCCcchHHHHHHHHHHHhhCCCCCChhhh-hcc--CCCCcchHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 216 KSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-RNT--ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 216 ~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-~~~--~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
.......|+|.+|.+...+..|..+...... ..+ ......+.....+|+..++++|+++.+++.|.
T Consensus 367 ~~~~r~~dL~~lgll~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~ 435 (1351)
T KOG1035|consen 367 AKKSRLTDLWCLGLLLLQLSQGEDISEKSAVPVSLLDVLSTSELLDALPKCLDEDSEERLSALELLTHP 435 (1351)
T ss_pred chhhhhhHHHHHHHHHhhhhhcCcccccccchhhhhccccchhhhhhhhhhcchhhhhccchhhhhhch
Confidence 1122346999999999998887654321111 100 11122566777889999999999999999984
|
|
| >COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.016 Score=57.10 Aligned_cols=124 Identities=15% Similarity=0.119 Sum_probs=84.5
Q ss_pred cCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCee-EEeeeEEecccCcCCcccE
Q 004157 24 GDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNIL-AFLHSTEVENIDATSTKIT 101 (771)
Q Consensus 24 ~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIl-kv~d~~e~e~~d~~~~~~~ 101 (771)
.+.++.|+ | .||.|.++ |..+++|+-... .....+..|.++|..+.--++- ++|.+-+
T Consensus 27 ~~~L~KG~~s--~Vyl~~~~--~~~~a~Kvrr~d----s~r~~l~kEakiLeil~g~~~~p~vy~yg~------------ 86 (201)
T COG2112 27 EKELAKGTTS--VVYLGEWR--GGEVALKVRRRD----SPRRNLEKEAKILEILAGEGVTPEVYFYGE------------ 86 (201)
T ss_pred hhhhhccccc--EEEEeecc--CceEEEEEecCC----cchhhHHHHHHHHHHhhhcCCCceEEEech------------
Confidence 34678888 8 89999986 779999986532 3456788899999999876653 4444433
Q ss_pred EEEEecCC-c-chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCC--CCEEEcCCCcEEEEccCccc
Q 004157 102 IYIVTEPV-M-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCL--SSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 102 iyIVtE~v-~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp--~NI~v~~~G~~KL~dFgla~ 177 (771)
.+|.|||+ + +|.+.-... ..+. +..++++---|- ..||-|+.|+- .||++ .++++.|+||+-++
T Consensus 87 ~~i~me~i~G~~L~~~~~~~------~rk~----l~~vlE~a~~LD-~~GI~H~El~~~~k~vlv-~~~~~~iIDFd~At 154 (201)
T COG2112 87 DFIRMEYIDGRPLGKLEIGG------DRKH----LLRVLEKAYKLD-RLGIEHGELSRPWKNVLV-NDRDVYIIDFDSAT 154 (201)
T ss_pred hhhhhhhhcCcchhhhhhcc------cHHH----HHHHHHHHHHHH-HhccchhhhcCCceeEEe-cCCcEEEEEccchh
Confidence 26779999 4 566543321 1122 456666633344 47999999975 45555 55589999999987
Q ss_pred cc
Q 004157 178 EF 179 (771)
Q Consensus 178 ~~ 179 (771)
..
T Consensus 155 ~k 156 (201)
T COG2112 155 FK 156 (201)
T ss_pred hc
Confidence 43
|
|
| >PRK09550 mtnK methylthioribose kinase; Reviewed | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.038 Score=62.00 Aligned_cols=75 Identities=15% Similarity=0.051 Sum_probs=48.1
Q ss_pred CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC---c--hhHHHHHHHHHHHHhcCC---CCCeeEEeeeEEecccCc
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA---Q--DGHLAAARNGVKRLRTVR---HPNILAFLHSTEVENIDA 95 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~---~--~~~~~~~~~ei~~Lk~Lr---HPnIlkv~d~~e~e~~d~ 95 (771)
+.++.|. + .||++.....++.|.||.-..... . ....++.+.|.+.|+.+. -..+.+++.+-+.
T Consensus 32 ~elggGn~N--~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D~~----- 104 (401)
T PRK09550 32 REIGDGNLN--LVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYDEE----- 104 (401)
T ss_pred eEcCCCceE--EEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEECCC-----
Confidence 4577776 6 899998764335899998531100 1 123456677888888764 2457778776432
Q ss_pred CCcccEEEEEecCCcc
Q 004157 96 TSTKITIYIVTEPVMP 111 (771)
Q Consensus 96 ~~~~~~iyIVtE~v~~ 111 (771)
..++|||++.+
T Consensus 105 -----~~~lVME~L~~ 115 (401)
T PRK09550 105 -----LAVTVMEDLSD 115 (401)
T ss_pred -----CCEEEEecCCC
Confidence 45899999843
|
|
| >cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.026 Score=58.65 Aligned_cols=30 Identities=17% Similarity=0.206 Sum_probs=25.3
Q ss_pred CCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 148 CKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 148 ~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
..++|||+++.||+|+..+..-|+||+.+.
T Consensus 164 ~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~ 193 (235)
T cd05155 164 PVWFHGDLAPGNLLVQDGRLSAVIDFGCLG 193 (235)
T ss_pred ceEEeCCCCCCcEEEECCCEEEEEeCcccC
Confidence 359999999999999876556799999874
|
The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista |
| >PF02985 HEAT: HEAT repeat; InterPro: IPR000357 The HEAT repeat is a tandemly repeated, 37-47 amino acid long module occurring in a number of cytoplasmic proteins, including the four name-giving proteins huntingtin, elongation factor 3 (EF3), the 65 Kd alpha regulatory subunit of protein phosphatase 2A (PP2A) and the yeast PI3-kinase TOR1 [] | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.0037 Score=43.34 Aligned_cols=31 Identities=39% Similarity=0.519 Sum_probs=23.6
Q ss_pred HHHHHHhhccCCCCcchhhHHHHHHHhhhcc
Q 004157 444 LLKYLSKLQVDEEPAIRTNTTILLGNIASHL 474 (771)
Q Consensus 444 LL~~laklq~D~~~~IRtnt~icl~kia~~L 474 (771)
|||.|.++..|+++.||.+++.||++|++++
T Consensus 1 llp~l~~~l~D~~~~VR~~a~~~l~~i~~~~ 31 (31)
T PF02985_consen 1 LLPILLQLLNDPSPEVRQAAAECLGAIAEHC 31 (31)
T ss_dssp HHHHHHHHHT-SSHHHHHHHHHHHHHHHHTS
T ss_pred CHHHHHHHcCCCCHHHHHHHHHHHHHHHhhC
Confidence 5777778888888888888888888887764
|
Arrays of HEAT repeats consists of 3 to 36 units forming a rod-like helical structure and appear to function as protein-protein interaction surfaces. It has been noted that many HEAT repeat-containing proteins are involved in intracellular transport processes. In the crystal structure of PP2A PR65/A [], the HEAT repeats consist of pairs of antiparallel alpha helices [].; GO: 0005515 protein binding; PDB: 3FGA_A 2PF4_C 2IAE_A 2BKU_D 3EA5_B 3ND2_A 2BPT_A 2NYL_A 2NPP_D 2PKG_B .... |
| >PF12755 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.025 Score=50.45 Aligned_cols=67 Identities=16% Similarity=0.298 Sum_probs=58.3
Q ss_pred hhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHH--hHHHHHHHHhhccCCCCcchhhHHHH
Q 004157 400 VVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTI--SGSLLKYLSKLQVDEEPAIRTNTTIL 466 (771)
Q Consensus 400 ~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l--~~~LL~~laklq~D~~~~IRtnt~ic 466 (771)
..-+.|+|.++.+|.|.+..||..+..++..++.......+ -++|+..|.++..|+++.||.-+.+.
T Consensus 23 ~~l~~Il~pVL~~~~D~d~rVRy~AcEaL~ni~k~~~~~~l~~f~~IF~~L~kl~~D~d~~Vr~~a~~L 91 (97)
T PF12755_consen 23 KYLDEILPPVLKCFDDQDSRVRYYACEALYNISKVARGEILPYFNEIFDALCKLSADPDENVRSAAELL 91 (97)
T ss_pred HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHH
Confidence 44567999999999999999999999999999877777665 47899999999999999999877554
|
|
| >PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C) | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.0074 Score=60.71 Aligned_cols=98 Identities=17% Similarity=0.005 Sum_probs=70.0
Q ss_pred HHHHHHHhcCCC-CCeeEEeeeEEecccCcCCcccEEEEEecCCc--chHHH---HHHhCCCCCCcHHHHHHHHHHHHHH
Q 004157 67 RNGVKRLRTVRH-PNILAFLHSTEVENIDATSTKITIYIVTEPVM--PLSEK---IKELGLEGSQRDEYYAWGLNQIAKA 140 (771)
Q Consensus 67 ~~ei~~Lk~LrH-PnIlkv~d~~e~e~~d~~~~~~~iyIVtE~v~--~L~~~---L~~~~~~~~~~~~~i~~gl~QI~~a 140 (771)
.+|.-+|+.|.+ +++.++++++-. ++|+||++ ++... +..... ........+..+++..
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG~------------~~v~E~~~~~~~~~~~~~l~~~~~---~~w~~R~~iA~~lL~~ 71 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCGR------------FYVVEYVGAGSLYGIYRPLSQFLQ---SPWEQRAKIALQLLEL 71 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECCC------------EEEEEeecCccccccccccccccc---cCHHHHHHHHHHHHHH
Confidence 468888999986 689999999843 77999996 33211 111100 1122233448888999
Q ss_pred HHHHHcC--CCceecCCCCCCEEEcCCCcEEEEccCccccc
Q 004157 141 VSFLNND--CKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (771)
Q Consensus 141 L~fLH~~--~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~ 179 (771)
+.+|++. ..+.-+|++++|+-|+++|.+|+.|.+.+...
T Consensus 72 l~~l~~~~~~~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 72 LEELDHGPLGFFYLCDVSPDNFGVNDDGRLKLIDLDDVFVE 112 (188)
T ss_pred HHHHhcCCCCcEEEeecchHHeEEeCCCcEEEEechhcchh
Confidence 9999851 24778999999999999999999999987644
|
Proteins in this uncharacterised family are described as transmembrane proteins. |
| >PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.049 Score=63.31 Aligned_cols=154 Identities=19% Similarity=0.209 Sum_probs=116.7
Q ss_pred HhccCCChhhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcCh---hhhhhccHHHHHhhcCCCcHHHHHHHHHHH
Q 004157 352 KMGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSA---QVVDEQVYPHVATGFADTSAFLREMTLKSM 428 (771)
Q Consensus 352 ~i~~~l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~---~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i 428 (771)
++.+.+..++-...+.+.+......++..||...|..+..++.+-+. -..+..+++.++.++.|.+..|.+.+++.+
T Consensus 64 ~~l~~~~~~~l~~~~~~~L~~gL~h~~~~Vr~l~l~~l~~~~~~~~~~~~~~~~~~l~~~i~~~L~~~d~~Va~~A~~~L 143 (503)
T PF10508_consen 64 RLLSALSPDSLLPQYQPFLQRGLTHPSPKVRRLALKQLGRIARHSEGAAQLLVDNELLPLIIQCLRDPDLSVAKAAIKAL 143 (503)
T ss_pred HHHhccCHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCHHHHHHhcCccHHHHHHHHHcCCcHHHHHHHHHHH
Confidence 44455555555677788899999999999999988888777655432 245678999999999999999999999999
Q ss_pred HhhccCCChh--HHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcch---hhHHhHHHHHHhhhcCCCcchhhhe
Q 004157 429 LVLAPKLSQR--TISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGT---RKRVLINAFTVRALRDTFSPARGAA 503 (771)
Q Consensus 429 ~~l~~kL~~~--~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~---~~~vL~~af~~~~lkD~f~~~R~a~ 503 (771)
..++..-..- .+.+.++..|..+-..+...||....-++.+|+.+=.... ...=|++.+. +.|++.++-+|+.+
T Consensus 144 ~~l~~~~~~~~~l~~~~~~~~L~~l~~~~~~~vR~Rv~el~v~i~~~S~~~~~~~~~sgll~~ll-~eL~~dDiLvqlna 222 (503)
T PF10508_consen 144 KKLASHPEGLEQLFDSNLLSKLKSLMSQSSDIVRCRVYELLVEIASHSPEAAEAVVNSGLLDLLL-KELDSDDILVQLNA 222 (503)
T ss_pred HHHhCCchhHHHHhCcchHHHHHHHHhccCHHHHHHHHHHHHHHHhcCHHHHHHHHhccHHHHHH-HHhcCccHHHHHHH
Confidence 9998753332 1234447888887766677899999999988876543322 1112678888 78999999999998
Q ss_pred eee
Q 004157 504 KIL 506 (771)
Q Consensus 504 l~a 506 (771)
+.-
T Consensus 223 lel 225 (503)
T PF10508_consen 223 LEL 225 (503)
T ss_pred HHH
Confidence 875
|
26S proteasome non-ATPase regulatory subunit 5 is one of a number of chaperones that are involved in the assembly of the proteasome. The chaperones dissociate before 26S proteasome formation is complete [].; GO: 0044183 protein binding involved in protein folding |
| >PF13646 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2IAE_A 3B2A_A | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.021 Score=49.19 Aligned_cols=86 Identities=16% Similarity=0.337 Sum_probs=63.2
Q ss_pred HHHHHHhh-cCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHH
Q 004157 367 LPTIVKLF-ASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLL 445 (771)
Q Consensus 367 ~P~i~~lF-~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL 445 (771)
+|.+++.+ ..+++.+|...+..|. .+.. .+++|.++..+.|.++.||.+++.++-.+ + ..+.+
T Consensus 1 i~~L~~~l~~~~~~~vr~~a~~~L~----~~~~----~~~~~~L~~~l~d~~~~vr~~a~~aL~~i----~----~~~~~ 64 (88)
T PF13646_consen 1 IPALLQLLQNDPDPQVRAEAARALG----ELGD----PEAIPALIELLKDEDPMVRRAAARALGRI----G----DPEAI 64 (88)
T ss_dssp HHHHHHHHHTSSSHHHHHHHHHHHH----CCTH----HHHHHHHHHHHTSSSHHHHHHHHHHHHCC----H----HHHTH
T ss_pred CHHHHHHHhcCCCHHHHHHHHHHHH----HcCC----HhHHHHHHHHHcCCCHHHHHHHHHHHHHh----C----CHHHH
Confidence 45677766 8899999988887666 3332 35789999999999999999999999865 2 34566
Q ss_pred HHHHhhc-cCCCCcchhhHHHHHH
Q 004157 446 KYLSKLQ-VDEEPAIRTNTTILLG 468 (771)
Q Consensus 446 ~~laklq-~D~~~~IRtnt~icl~ 468 (771)
+.|.++. .|.+..||..++-.||
T Consensus 65 ~~L~~~l~~~~~~~vr~~a~~aL~ 88 (88)
T PF13646_consen 65 PALIKLLQDDDDEVVREAAAEALG 88 (88)
T ss_dssp HHHHHHHTC-SSHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCcHHHHHHHHhhcC
Confidence 6676644 4556778988877765
|
|
| >COG5096 Vesicle coat complex, various subunits [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.027 Score=66.86 Aligned_cols=149 Identities=15% Similarity=0.251 Sum_probs=113.1
Q ss_pred HHHhccCCChhhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHH
Q 004157 350 LLKMGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSML 429 (771)
Q Consensus 350 ll~i~~~l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~ 429 (771)
+=+|...+...+....++|-+++.....|..++-.+=-++..|.+.=+.+.+. ..+.+..-|+|.|+.||..||+.|.
T Consensus 40 mK~iIa~M~~G~dmssLf~dViK~~~trd~ElKrL~ylYl~~yak~~P~~~lL--avNti~kDl~d~N~~iR~~AlR~ls 117 (757)
T COG5096 40 MKKIIAQMSLGEDMSSLFPDVIKNVATRDVELKRLLYLYLERYAKLKPELALL--AVNTIQKDLQDPNEEIRGFALRTLS 117 (757)
T ss_pred HHHHHHHHhcCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhccCHHHHHH--HHHHHHhhccCCCHHHHHHHHHHHH
Confidence 33333334443345667788888877888888777666777776665543322 5788999999999999999999874
Q ss_pred hhccCCChhHHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHH-hHHHHHHhhhcCCCcchhhheeee
Q 004157 430 VLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRV-LINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 430 ~l~~kL~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~v-L~~af~~~~lkD~f~~~R~a~l~a 506 (771)
+|....+...+++-+.++..|+.+.||-++++|+.||=. ++++..... ++-... -++.|+.+.|--+|+.+
T Consensus 118 ----~l~~~el~~~~~~~ik~~l~d~~ayVRk~Aalav~kly~-ld~~l~~~~g~~~~l~-~l~~D~dP~Vi~nAl~s 189 (757)
T COG5096 118 ----LLRVKELLGNIIDPIKKLLTDPHAYVRKTAALAVAKLYR-LDKDLYHELGLIDILK-ELVADSDPIVIANALAS 189 (757)
T ss_pred ----hcChHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHh-cCHhhhhcccHHHHHH-HHhhCCCchHHHHHHHH
Confidence 678899999999999999999999999999999999853 444444444 566666 67888888888888877
|
|
| >KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.0044 Score=66.20 Aligned_cols=136 Identities=14% Similarity=0.150 Sum_probs=90.7
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCC--------CCch----------h--HHHHHHHHHHHHhcCCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGT--------NAQD----------G--HLAAARNGVKRLRTVRH 78 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~--------~~~~----------~--~~~~~~~ei~~Lk~LrH 78 (771)
=|.+|++||.|- + .||.+.+. .|.+.++|.-... +..+ . ..-.+.+|+..|+.|.-
T Consensus 93 v~svGnqIGVGKES--DIY~v~d~-~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e 169 (465)
T KOG2268|consen 93 VESVGNQIGVGKES--DIYVVADE-EGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYE 169 (465)
T ss_pred hhhhcccccccccc--ceEEEecC-CCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHH
Confidence 377889999988 7 89999875 5788878754421 1110 0 12245679999999863
Q ss_pred C--CeeEEeeeEEecccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecC
Q 004157 79 P--NILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGN 154 (771)
Q Consensus 79 P--nIlkv~d~~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~d 154 (771)
. -|.+.+|+. .-++|||++ .||...-+- .....+ ...++.-+.-|-+ .|+||||
T Consensus 170 ~gfpVPkpiD~~------------RH~Vvmelv~g~Pl~~v~~v------~d~~~l---y~~lm~~Iv~la~-~GlIHgD 227 (465)
T KOG2268|consen 170 RGFPVPKPIDHN------------RHCVVMELVDGYPLRQVRHV------EDPPTL---YDDLMGLIVRLAN-HGLIHGD 227 (465)
T ss_pred cCCCCCCccccc------------ceeeHHHhhcccceeeeeec------CChHHH---HHHHHHHHHHHHH-cCceecc
Confidence 2 366666654 448999999 366532111 112222 3344444455664 7999999
Q ss_pred CCCCCEEEcCCCcEEEEccCcccccC
Q 004157 155 VCLSSVVVTQTLDWKLHAFDVLSEFD 180 (771)
Q Consensus 155 Ikp~NI~v~~~G~~KL~dFgla~~~~ 180 (771)
.+--||+|.+++.++++||--+....
T Consensus 228 FNEFNimv~dd~~i~vIDFPQmvS~s 253 (465)
T KOG2268|consen 228 FNEFNIMVKDDDKIVVIDFPQMVSTS 253 (465)
T ss_pred cchheeEEecCCCEEEeechHhhccC
Confidence 99999999999999999998776543
|
|
| >TIGR01767 MTRK 5-methylthioribose kinase | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.031 Score=61.53 Aligned_cols=74 Identities=12% Similarity=-0.010 Sum_probs=45.5
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCC-----CCchhHHHHHHHHHHHHhcCC--CC-CeeEEeeeEEecccCcC
Q 004157 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGT-----NAQDGHLAAARNGVKRLRTVR--HP-NILAFLHSTEVENIDAT 96 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~-----~~~~~~~~~~~~ei~~Lk~Lr--HP-nIlkv~d~~e~e~~d~~ 96 (771)
.||.|. . .||++.....++.|.||--..- ..-.-...+.+-|...|+... -| .+.++|.+-..
T Consensus 2 EigdGnlN--~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~D~e------ 73 (370)
T TIGR01767 2 EVGDGNLN--LVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHFDTE------ 73 (370)
T ss_pred cCCCCceE--EEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEEccc------
Confidence 466676 5 7999987543368999865421 011223445666778887764 44 46666655432
Q ss_pred CcccEEEEEecCCcc
Q 004157 97 STKITIYIVTEPVMP 111 (771)
Q Consensus 97 ~~~~~iyIVtE~v~~ 111 (771)
...+|||++.+
T Consensus 74 ----~~~~vMEdL~~ 84 (370)
T TIGR01767 74 ----MAVTVMEDLSH 84 (370)
T ss_pred ----cceehHhhCcc
Confidence 45799999843
|
This enzyme is involved in the methionine salvage pathway in certain bacteria. |
| >PRK12396 5-methylribose kinase; Reviewed | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.021 Score=63.66 Aligned_cols=75 Identities=12% Similarity=-0.040 Sum_probs=48.2
Q ss_pred cCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCC--C--CchhHHHHHHHHHHHHhcCC--CC-CeeEEeeeEEecccCc
Q 004157 24 GDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGT--N--AQDGHLAAARNGVKRLRTVR--HP-NILAFLHSTEVENIDA 95 (771)
Q Consensus 24 ~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~--~--~~~~~~~~~~~ei~~Lk~Lr--HP-nIlkv~d~~e~e~~d~ 95 (771)
.+.||.|. . -||++.+...++.|.||--..- . .-.-..++.+-|.+.|+.+. -| .+.++|.+-+.
T Consensus 34 ~~eigdGnlN--~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~D~e----- 106 (409)
T PRK12396 34 CKEIGDGNLN--YVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLFDSV----- 106 (409)
T ss_pred eeEcCCCceE--EEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEECcH-----
Confidence 34677777 5 7999987544567888865421 1 11123556677888888774 45 46667765432
Q ss_pred CCcccEEEEEecCCc
Q 004157 96 TSTKITIYIVTEPVM 110 (771)
Q Consensus 96 ~~~~~~iyIVtE~v~ 110 (771)
...+|||++.
T Consensus 107 -----~~~~vMEdL~ 116 (409)
T PRK12396 107 -----MNCCVMEDLS 116 (409)
T ss_pred -----HhhHHHHhCc
Confidence 4589999984
|
|
| >cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.04 Score=56.96 Aligned_cols=30 Identities=7% Similarity=0.204 Sum_probs=27.0
Q ss_pred CCceecCCCCCCEEEcC-CCcEEEEccCccc
Q 004157 148 CKLVHGNVCLSSVVVTQ-TLDWKLHAFDVLS 177 (771)
Q Consensus 148 ~~ivH~dIkp~NI~v~~-~G~~KL~dFgla~ 177 (771)
..++|||+++.||+++. ++.+.|+||+++.
T Consensus 170 ~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~ 200 (235)
T cd05157 170 IVFCHNDLLSGNIIYNEEKNSVKFIDYEYAG 200 (235)
T ss_pred EEEEcCCCCcCcEEEeCCCCCEEEEEcccCC
Confidence 46999999999999998 5789999999875
|
ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo |
| >KOG1967 consensus DNA repair/transcription protein Mms19 [Replication, recombination and repair; Transcription] | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.018 Score=68.33 Aligned_cols=143 Identities=20% Similarity=0.289 Sum_probs=115.8
Q ss_pred hhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhc---cHHHHHhhcCCCcHHHHHHHHHHHHhhccCCC
Q 004157 360 EEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQ---VYPHVATGFADTSAFLREMTLKSMLVLAPKLS 436 (771)
Q Consensus 360 eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~---I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~ 436 (771)
+-|-..|+|.++..|...+-.+|-.+|.-|++.+.+++.+.+..+ ++|.+++++.-.+..+|-.|+..+..+..+..
T Consensus 862 QRfF~~ivP~l~~~~~t~~~~~K~~yl~~LshVl~~vP~~vllp~~~~LlPLLLq~Ls~~D~~v~vstl~~i~~~l~~~~ 941 (1030)
T KOG1967|consen 862 QRFFCDIVPILVSKFETAPGSQKHNYLEALSHVLTNVPKQVLLPQFPMLLPLLLQALSMPDVIVRVSTLRTIPMLLTESE 941 (1030)
T ss_pred HHHHHhhHHHHHHHhccCCccchhHHHHHHHHHHhcCCHHhhccchhhHHHHHHHhcCCCccchhhhHhhhhhHHHHhcc
Confidence 456677999999999977888999999999999999999987765 69999999999999999888877766554433
Q ss_pred ---hhHHhHHHHHHHHhhccCCC---CcchhhHHHHHHHhhhccCcc----hhhHHhHHHHHHhhhcCCCcchhhheee
Q 004157 437 ---QRTISGSLLKYLSKLQVDEE---PAIRTNTTILLGNIASHLNEG----TRKRVLINAFTVRALRDTFSPARGAAKI 505 (771)
Q Consensus 437 ---~~~l~~~LL~~laklq~D~~---~~IRtnt~icl~kia~~L~~~----~~~~vL~~af~~~~lkD~f~~~R~a~l~ 505 (771)
... ...+.|++-.+..|.+ -.||--++-|++.|...+... .|.+| +.|+. +.|.|+.--+|.-|+.
T Consensus 942 tL~t~~-~~Tlvp~lLsls~~~~n~~~~VR~~ALqcL~aL~~~~P~~~l~~fr~~V-l~al~-k~LdDkKRlVR~eAv~ 1017 (1030)
T KOG1967|consen 942 TLQTEH-LSTLVPYLLSLSSDNDNNMMVVREDALQCLNALTRRLPTKSLLSFRPLV-LRALI-KILDDKKRLVRKEAVD 1017 (1030)
T ss_pred ccchHH-HhHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHhccCCCcccccccHHH-HHHhh-hccCcHHHHHHHHHHH
Confidence 333 4579999999999876 689999999999999987643 45665 67777 7899988555554443
|
|
| >PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.056 Score=63.00 Aligned_cols=187 Identities=20% Similarity=0.248 Sum_probs=117.7
Q ss_pred ccCChhhHHhhhhhchhhhcCCChhhhhhhhHHHHHHHHhcCCCCchhhHHHH-HhccCCChhhhhhhhHHHHHHhhcCC
Q 004157 299 NLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALL-KMGSWLSTEEFSVKVLPTIVKLFASN 377 (771)
Q Consensus 299 ~~k~~~eK~~F~~~L~~~l~~fP~~~~~~kILP~Ll~~~~~~~~~~~~L~~ll-~i~~~l~~eef~~~i~P~i~~lF~~~ 377 (771)
...++--+...++-|......-+......++++.+...+... ...++.... .+.......+....+++.+.+++.++
T Consensus 202 ~~~~~~~q~~il~~l~~~~~~~~~~~~~~~~i~~l~~~l~s~--~~~V~~e~~~~i~~l~~~~~~~~~~~~~L~~lL~s~ 279 (526)
T PF01602_consen 202 SDPDPWLQIKILRLLRRYAPMEPEDADKNRIIEPLLNLLQSS--SPSVVYEAIRLIIKLSPSPELLQKAINPLIKLLSSS 279 (526)
T ss_dssp TCCSHHHHHHHHHHHTTSTSSSHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHTSS
T ss_pred cccchHHHHHHHHHHHhcccCChhhhhHHHHHHHHHHHhhcc--ccHHHHHHHHHHHHhhcchHHHHhhHHHHHHHhhcc
Confidence 444454455555544444333333222245666666665521 122222222 22222233446788999999999999
Q ss_pred cHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHHHHHHhhccCCCC
Q 004157 378 DRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEP 457 (771)
Q Consensus 378 Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL~~laklq~D~~~ 457 (771)
|..+|+..|+.|..++.+-.+. +. .....+.....|.+..||..++..+..++..-+-..+.++|+.++..+ .++
T Consensus 280 ~~nvr~~~L~~L~~l~~~~~~~-v~-~~~~~~~~l~~~~d~~Ir~~~l~lL~~l~~~~n~~~Il~eL~~~l~~~---~d~ 354 (526)
T PF01602_consen 280 DPNVRYIALDSLSQLAQSNPPA-VF-NQSLILFFLLYDDDPSIRKKALDLLYKLANESNVKEILDELLKYLSEL---SDP 354 (526)
T ss_dssp SHHHHHHHHHHHHHHCCHCHHH-HG-THHHHHHHHHCSSSHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHC-----H
T ss_pred cchhehhHHHHHHHhhcccchh-hh-hhhhhhheecCCCChhHHHHHHHHHhhcccccchhhHHHHHHHHHHhc---cch
Confidence 9999999999999999887343 44 344444455558889999999999999998777778888888887322 256
Q ss_pred cchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCC
Q 004157 458 AIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDT 495 (771)
Q Consensus 458 ~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~ 495 (771)
.+|-..+-.|+.|+....... +..+..+. ..++..
T Consensus 355 ~~~~~~i~~I~~la~~~~~~~--~~~v~~l~-~ll~~~ 389 (526)
T PF01602_consen 355 DFRRELIKAIGDLAEKFPPDA--EWYVDTLL-KLLEIS 389 (526)
T ss_dssp HHHHHHHHHHHHHHHHHGSSH--HHHHHHHH-HHHHCT
T ss_pred hhhhhHHHHHHHHHhccCchH--HHHHHHHH-Hhhhhc
Confidence 699999999999999886532 22334444 455543
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. Clathrin coats contain both clathrin and adaptor complexes that link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. The two major types of clathrin adaptor complexes are the heterotetrameric adaptor protein (AP) complexes, and the monomeric GGA (Golgi-localising, Gamma-adaptin ear domain homology, ARF-binding proteins) adaptors []. All AP complexes are heterotetramers composed of two large subunits (adaptins), a medium subunit (mu) and a small subunit (sigma). Each subunit has a specific function. Adaptin subunits recognise and bind to clathrin through their hinge region (clathrin box), and recruit accessory proteins that modulate AP function through their C-terminal appendage domains. By contrast, GGAs are monomers composed of four domains, which have functions similar to AP subunits: an N-terminal VHS (Vps27p/Hrs/Stam) domain, a GAT (GGA and Tom1) domain, a hinge region, and a C-terminal GAE (gamma-adaptin ear) domain. The GAE domain is similar to the AP gamma-adaptin ear domain, being responsible for the recruitment of accessory proteins that regulate clathrin-mediated endocytosis []. While clathrin mediates endocytic protein transport from ER to Golgi, coatomers (COPI, COPII) primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the N-terminal domain of various adaptins from different AP clathrin adaptor complexes (including AP1, AP2, AP3 and AP4), and from the beta and gamma subunits of various coatomer (COP) adaptors. This domain has a 2-layer alpha/alpha fold that forms a right-handed superhelix, and is a member of the ARM repeat superfamily []. The N-terminal region of the various AP adaptor proteins share strong sequence identity; by contrast, the C-terminal domains of different adaptins share similar structural folds, but have little sequence identity []. It has been proposed that the N-terminal domain interacts with another uniform component of the coated vesicles. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 1W63_C 2JKR_A 2JKT_A 2XA7_A 2VGL_B 3TJZ_E. |
| >PTZ00429 beta-adaptin; Provisional | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.074 Score=64.18 Aligned_cols=169 Identities=15% Similarity=0.126 Sum_probs=112.6
Q ss_pred hhhccCChhhHHhhhhhchhhhcCCChhhhhhhhHHHHHHHHhcCCCCchhhHHH--HHhccCCChhhhhhhhHHHHHHh
Q 004157 296 EILNLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTAL--LKMGSWLSTEEFSVKVLPTIVKL 373 (771)
Q Consensus 296 ~~l~~k~~~eK~~F~~~L~~~l~~fP~~~~~~kILP~Ll~~~~~~~~~~~~L~~l--l~i~~~l~~eef~~~i~P~i~~l 373 (771)
+++...+..+|..-++.+- ..+-.+.-...+.|..++.+.........|.-+ ...++. ..|-.-.++..+.+-
T Consensus 39 ~~L~s~~~~~kk~alKkvI---a~mt~G~DvS~LF~dVvk~~~S~d~elKKLvYLYL~~ya~~--~pelalLaINtl~KD 113 (746)
T PTZ00429 39 NDLNGTDSYRKKAAVKRII---ANMTMGRDVSYLFVDVVKLAPSTDLELKKLVYLYVLSTARL--QPEKALLAVNTFLQD 113 (746)
T ss_pred HHHHCCCHHHHHHHHHHHH---HHHHCCCCchHHHHHHHHHhCCCCHHHHHHHHHHHHHHccc--ChHHHHHHHHHHHHH
Confidence 4444556666655555432 222222333445666666555443222223222 222221 223344567888888
Q ss_pred hcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHHHHHHhhcc
Q 004157 374 FASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQV 453 (771)
Q Consensus 374 F~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL~~laklq~ 453 (771)
+.++++-||-..|+.|.. +....+-+.+.+.+..++.|.+|.||..++-++..+...-.+......+++.|.++..
T Consensus 114 l~d~Np~IRaLALRtLs~----Ir~~~i~e~l~~~lkk~L~D~~pYVRKtAalai~Kly~~~pelv~~~~~~~~L~~LL~ 189 (746)
T PTZ00429 114 TTNSSPVVRALAVRTMMC----IRVSSVLEYTLEPLRRAVADPDPYVRKTAAMGLGKLFHDDMQLFYQQDFKKDLVELLN 189 (746)
T ss_pred cCCCCHHHHHHHHHHHHc----CCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhhCcccccccchHHHHHHHhc
Confidence 899999999888875543 4445667789999999999999999999999999987655443334567788888888
Q ss_pred CCCCcchhhHHHHHHHhhhc
Q 004157 454 DEEPAIRTNTTILLGNIASH 473 (771)
Q Consensus 454 D~~~~IRtnt~icl~kia~~ 473 (771)
|.++.|..|++..|..|...
T Consensus 190 D~dp~Vv~nAl~aL~eI~~~ 209 (746)
T PTZ00429 190 DNNPVVASNAAAIVCEVNDY 209 (746)
T ss_pred CCCccHHHHHHHHHHHHHHh
Confidence 99999999999999998754
|
|
| >KOG1820 consensus Microtubule-associated protein [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.064 Score=64.79 Aligned_cols=208 Identities=14% Similarity=0.157 Sum_probs=153.5
Q ss_pred hcCCChhhhhhhhHHHHHHHHhcCC--CCchhhHHHHHhccC---CChhhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHH
Q 004157 317 AEQLPRQIVLKKLLPLLASALEFGS--AAAPALTALLKMGSW---LSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQ 391 (771)
Q Consensus 317 l~~fP~~~~~~kILP~Ll~~~~~~~--~~~~~L~~ll~i~~~---l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~ 391 (771)
.+.+|+.-+..++-|.|...+.... ...-+|..+..+.+. ...+.|...+...+...+.+..-.+-+.-++.|..
T Consensus 242 ~d~l~~~di~~ki~~~l~t~~~s~~WK~R~Eale~l~~~l~e~~~~~~~~~~~ll~~~~ki~~kDaN~~v~~~aa~~l~~ 321 (815)
T KOG1820|consen 242 FDLLPRVDILSKITKNLETEMLSKKWKDRKEALEELVAILEEAKKEIVKGYTGLLGILLKIRLKDANINVVMLAAQILEL 321 (815)
T ss_pred cccCchhhhhhhcChHHHHhhhccchHHHHHHHHHHHHHHhccccccccCcchHHHHHHHHhccCcchhHHHHHHHHHHH
Confidence 3445555566666666666655321 112244444444332 23455777778888888777777888888899999
Q ss_pred HHhhcChhh--hhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHHHHHHhhccCCCCcchhhHHHHHHH
Q 004157 392 YGQSFSAQV--VDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGN 469 (771)
Q Consensus 392 ~~~~l~~~~--v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~k 469 (771)
+...+.... +...++|.|+..+.|.-+.+|+.+++++-.++. ..-...+.+.+...-.+..|.+|+-|...+.+
T Consensus 322 ia~~lr~~~~~~~~~v~p~lld~lkekk~~l~d~l~~~~d~~~n----s~~l~~~~~~I~e~lk~knp~~k~~~~~~l~r 397 (815)
T KOG1820|consen 322 IAKKLRPLFRKYAKNVFPSLLDRLKEKKSELRDALLKALDAILN----STPLSKMSEAILEALKGKNPQIKGECLLLLDR 397 (815)
T ss_pred HHHhcchhhHHHHHhhcchHHHHhhhccHHHHHHHHHHHHHHHh----cccHHHHHHHHHHHhcCCChhhHHHHHHHHHH
Confidence 999887653 344589999999999999999999999988777 44456677888887889999999999999999
Q ss_pred hhhccCc----chhhHHhHHHHHHhhhcCCCcchhhheeeeccCCHHHHHHHHHHHHHHHHHHHHH
Q 004157 470 IASHLNE----GTRKRVLINAFTVRALRDTFSPARGAAKILSYLNCDVRSKAFQAVDQFLQIVKQY 531 (771)
Q Consensus 470 ia~~L~~----~~~~~vL~~af~~~~lkD~f~~~R~a~l~a~~~~~~VR~~a~~~~~~~l~~l~~~ 531 (771)
.-..++. ....+-|+|... ...+|.+.++|.||+.+- --.+|--..++++.||..+.+.
T Consensus 398 ~~~~~~~~~~~~~t~~~l~p~~~-~~~~D~~~~VR~Aa~e~~--~~v~k~~Ge~~~~k~L~~~~~~ 460 (815)
T KOG1820|consen 398 KLRKLGPKTVEKETVKTLVPHLI-KHINDTDKDVRKAALEAV--AAVMKVHGEEVFKKLLKDLDKQ 460 (815)
T ss_pred HHhhcCCcCcchhhHHHHhHHHh-hhccCCcHHHHHHHHHHH--HHHHHHhhHHHHHHHHHhhccc
Confidence 8888882 235667899999 899999999999998871 1124666778888888888863
|
|
| >cd00020 ARM Armadillo/beta-catenin-like repeats | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.012 Score=53.39 Aligned_cols=103 Identities=13% Similarity=0.102 Sum_probs=78.8
Q ss_pred hhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccC---CChhHHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCc
Q 004157 400 VVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPK---LSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNE 476 (771)
Q Consensus 400 ~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~k---L~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~ 476 (771)
.+...+++.++..+.+.++.+|+.++..+..++.. .....+...+++.|.++-.|+++.+|-+++-||+.|+..-..
T Consensus 3 ~~~~~~i~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~ 82 (120)
T cd00020 3 VIQAGGLPALVSLLSSSDENVQREAAWALSNLSAGNNDNIQAVVEAGGLPALVQLLKSEDEEVVKAALWALRNLAAGPED 82 (120)
T ss_pred HHHcCChHHHHHHHHcCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCChHHHHHHHhCCCHHHHHHHHHHHHHHccCcHH
Confidence 45667899999999999999999999999988854 333445558999999998999999999999999999986532
Q ss_pred ch---hhHHhHHHHHHhhhcCCCcchhhhe
Q 004157 477 GT---RKRVLINAFTVRALRDTFSPARGAA 503 (771)
Q Consensus 477 ~~---~~~vL~~af~~~~lkD~f~~~R~a~ 503 (771)
.. ...-+++.+. +.|.+....+|..+
T Consensus 83 ~~~~~~~~g~l~~l~-~~l~~~~~~~~~~a 111 (120)
T cd00020 83 NKLIVLEAGGVPKLV-NLLDSSNEDIQKNA 111 (120)
T ss_pred HHHHHHHCCChHHHH-HHHhcCCHHHHHHH
Confidence 11 1122477777 78887765544443
|
An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, the junctional plaque protein plakoglobin, the adenomatous polyposis coli (APC) tumor suppressor protein, and a number of other proteins. ARM has been implicated in mediating protein-protein interactions, but no common features among the target proteins recognized by the ARM repeats have been identified; related to the HEAT domain; three consecutive copies of the repeat are represented by this alignment model. |
| >KOG0213 consensus Splicing factor 3b, subunit 1 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.021 Score=65.99 Aligned_cols=190 Identities=17% Similarity=0.203 Sum_probs=127.1
Q ss_pred hhhhhchhhhcCCChhhhhhhhHHHHHHHHhcCCCCchhhHHHHHhccCCCh--hhhhhhhHHHHHHhhcCCcHHHHHHH
Q 004157 308 TFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLST--EEFSVKVLPTIVKLFASNDRAIRVAL 385 (771)
Q Consensus 308 ~F~~~L~~~l~~fP~~~~~~kILP~Ll~~~~~~~~~~~~L~~ll~i~~~l~~--eef~~~i~P~i~~lF~~~Dr~iR~~L 385 (771)
.-++.|.+....|-.+.+-++|||.|++.---+.....++..+..|--.|+. --|..+|+=.|-++.-..|.-.|..=
T Consensus 382 ~~LR~ltdkar~~ga~~lfnqiLpllMs~tLeDqerhllVkvidriLyklDdlvrpYVhkILvViepllided~yar~eg 461 (1172)
T KOG0213|consen 382 SALRILTDKARNFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEG 461 (1172)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHcCccccchhhhhHHHHHHHHHHhhcccchhceeeeEEEeecceecchHHHhhch
Confidence 3444555555667777788899999887433333344444555555555554 45777777777777777776666554
Q ss_pred HHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHHHHHHhhccCC-CCcchhhHH
Q 004157 386 LQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDE-EPAIRTNTT 464 (771)
Q Consensus 386 L~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL~~laklq~D~-~~~IRtnt~ 464 (771)
.+-+..++....=..+-..+ =--|...++.||+.|.++...++..|.-. +|||+|..++.-. .-.-|-..+
T Consensus 462 reIisnLakaaGla~mistm----rpDidn~deYVRnttarafavvasalgip----~llpfLkavc~SkkSwqaRhTgI 533 (1172)
T KOG0213|consen 462 REIISNLAKAAGLATMISTM----RPDIDNKDEYVRNTTARAFAVVASALGIP----ALLPFLKAVCGSKKSWQARHTGI 533 (1172)
T ss_pred HHHHHHHHHHhhhHHHHHhh----cCCcccccHHHHHHHHHHHHHHHHHhCcH----HHHHHHHHHhccccchhhhchhh
Confidence 44444444433332222212 22356678999999999999999999865 4889998887643 445566667
Q ss_pred HHHHHhhhccCcc--hhhHHhHHHHHHhhhcCCCcchhhheeee
Q 004157 465 ILLGNIASHLNEG--TRKRVLINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 465 icl~kia~~L~~~--~~~~vL~~af~~~~lkD~f~~~R~a~l~a 506 (771)
-|+.+||-.++-+ ...+-|+..+. ..|+|....+|.-+-.+
T Consensus 534 kivqqIail~Gcsvlphl~~lv~ii~-~gl~De~qkVR~itAla 576 (1172)
T KOG0213|consen 534 KIVQQIAILSGCSVLPHLKPLVKIIE-HGLKDEQQKVRTITALA 576 (1172)
T ss_pred HHHHHHHHHhcchhhhhhHHHHHHHH-HhhcccchhhhhHHHHH
Confidence 7777777777755 34566788999 99999999999877666
|
|
| >PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.082 Score=53.65 Aligned_cols=119 Identities=16% Similarity=0.199 Sum_probs=78.0
Q ss_pred CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCC--------------CchhHHHHHHHHHHHHhcCC------CCCeeE
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTN--------------AQDGHLAAARNGVKRLRTVR------HPNILA 83 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~--------------~~~~~~~~~~~ei~~Lk~Lr------HPnIlk 83 (771)
..|+.|+ - .+|.- .+.....||+..... .........++|++....+. +.+|-+
T Consensus 7 ~~i~~G~~R--~cy~H---P~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r 81 (199)
T PF10707_consen 7 DLIAQGGER--DCYQH---PDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPR 81 (199)
T ss_pred cccccCCCc--eEEEC---CCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCccccccc
Confidence 3567776 4 45543 245667789987654 00112445666777777666 888999
Q ss_pred EeeeEEecccCcCCcccEEEEEecCCc--------chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCC
Q 004157 84 FLHSTEVENIDATSTKITIYIVTEPVM--------PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNV 155 (771)
Q Consensus 84 v~d~~e~e~~d~~~~~~~iyIVtE~v~--------~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dI 155 (771)
+++..+++- -..+|+|.+. +|.+++++..... .+ ...+-.-..+|-. .+|+.+|+
T Consensus 82 ~~G~veT~~--------G~Glv~e~I~d~dG~~s~TL~~~l~~~~~~~-----~~---~~~L~~f~~~l~~-~~Iv~~dl 144 (199)
T PF10707_consen 82 FYGFVETNL--------GLGLVVELIRDADGNISPTLEDYLKEGGLTE-----EL---RQALDEFKRYLLD-HHIVIRDL 144 (199)
T ss_pred EeEEEecCC--------ceEEEEEEEECCCCCcCccHHHHHHcCCccH-----HH---HHHHHHHHHHHHH-cCCeecCC
Confidence 999999853 5789999982 3888886654321 22 2223333445553 78999999
Q ss_pred CCCCEEEcCC
Q 004157 156 CLSSVVVTQT 165 (771)
Q Consensus 156 kp~NI~v~~~ 165 (771)
+|.||++...
T Consensus 145 ~~~NIv~~~~ 154 (199)
T PF10707_consen 145 NPHNIVVQRR 154 (199)
T ss_pred CcccEEEEec
Confidence 9999999643
|
PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner []. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 771 | ||||
| 1zmw_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 1e-04 | ||
| 4bcf_A | 331 | Structure Of Cdk9 In Complex With Cyclin T And A 2- | 1e-04 | ||
| 4ec8_A | 373 | Structure Of Full Length Cdk9 In Complex With Cycli | 1e-04 | ||
| 3mi9_A | 351 | Crystal Structure Of Hiv-1 Tat Complexed With Human | 2e-04 | ||
| 3d5u_A | 317 | Crystal Structure Of A Wildtype Polo-Like Kinase 1 | 2e-04 | ||
| 3d5w_A | 317 | Crystal Structure Of A Phosphorylated Polo-Like Kin | 2e-04 | ||
| 3blh_A | 331 | Crystal Structure Of Human Cdk9CYCLINT1 Length = 33 | 2e-04 | ||
| 3d5v_A | 317 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 3e-04 | ||
| 3db6_A | 301 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 3e-04 | ||
| 1zmv_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 4e-04 | ||
| 2r0i_A | 327 | Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len | 4e-04 | ||
| 1zmu_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 4e-04 | ||
| 2wzj_A | 327 | Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82 | 4e-04 | ||
| 2ou7_A | 335 | Structure Of The Catalytic Domain Of Human Polo-Lik | 5e-04 | ||
| 3thb_A | 333 | Structure Of Plk1 Kinase Domain In Complex With A B | 5e-04 | ||
| 2v5q_A | 315 | Crystal Structure Of Wild-type Plk-1 Kinase Domain | 5e-04 | ||
| 3kb7_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 6e-04 | ||
| 2rku_A | 294 | Structure Of Plk1 In Complex With Bi2536 Length = 2 | 6e-04 | ||
| 2yac_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 6e-04 | ||
| 3fe3_A | 328 | Crystal Structure Of The Kinase Mark3PAR-1: T211a-S | 8e-04 |
| >pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327 | Back alignment and structure |
|
| >pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331 | Back alignment and structure |
|
| >pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373 | Back alignment and structure |
|
| >pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351 | Back alignment and structure |
|
| >pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317 | Back alignment and structure |
|
| >pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317 | Back alignment and structure |
|
| >pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331 | Back alignment and structure |
|
| >pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317 | Back alignment and structure |
|
| >pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301 | Back alignment and structure |
|
| >pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327 | Back alignment and structure |
|
| >pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327 | Back alignment and structure |
|
| >pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327 | Back alignment and structure |
|
| >pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327 | Back alignment and structure |
|
| >pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335 | Back alignment and structure |
|
| >pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315 | Back alignment and structure |
|
| >pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311 | Back alignment and structure |
|
| >pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294 | Back alignment and structure |
|
| >pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311 | Back alignment and structure |
|
| >pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 771 | |||
| 1b3u_A | 588 | Protein (protein phosphatase PP2A); scaffold prote | 3e-17 | |
| 1b3u_A | 588 | Protein (protein phosphatase PP2A); scaffold prote | 1e-13 | |
| 1b3u_A | 588 | Protein (protein phosphatase PP2A); scaffold prote | 2e-13 | |
| 1b3u_A | 588 | Protein (protein phosphatase PP2A); scaffold prote | 5e-12 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 6e-11 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 6e-11 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 9e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-04 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 1e-08 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 2e-08 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 2e-08 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 9e-08 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 2e-07 | |
| 4apc_A | 350 | Serine/threonine-protein kinase NEK1; transferase; | 8e-07 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 5e-06 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 6e-06 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 1e-04 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 3e-04 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 4e-04 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 7e-04 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 7e-04 |
| >1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Length = 588 | Back alignment and structure |
|---|
Score = 85.1 bits (210), Expect = 3e-17
Identities = 41/229 (17%), Positives = 70/229 (30%), Gaps = 8/229 (3%)
Query: 294 FMEILNLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEF-GSAAAPALTALLK 352
++ L +D + +KL +A L + +LLP L + L
Sbjct: 15 LIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGT 74
Query: 353 MGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATG 412
+ + E+ +LP + L + +R ++ + S ++ P V
Sbjct: 75 FTTLVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRAISHEHSPSDLEAHFVPLVKRL 134
Query: 413 FADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIAS 472
R V P++S + L +Y L D+ P +R LG A
Sbjct: 135 AGGDWFTSRTSACGLFSVCYPRVSSAVKA-ELRQYFRNLCSDDTPMVRRAAASKLGEFAK 193
Query: 473 HLNEGTRKRVLINAFTVRALRDTFSPARGAA-----KILSYLNCDVRSK 516
L K +I F D R A I L +
Sbjct: 194 VLELDNVKSEIIPMF-SNLASDEQDSVRLLAVEACVNIAQLLPQEDLEA 241
|
| >1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Length = 588 | Back alignment and structure |
|---|
Score = 73.5 bits (180), Expect = 1e-13
Identities = 34/181 (18%), Positives = 66/181 (36%), Gaps = 2/181 (1%)
Query: 293 HFMEILNLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAA--APALTAL 350
+E+ + +P LA QL + +KL L + L A A + L
Sbjct: 406 AIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNL 465
Query: 351 LKMGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVA 410
K+ E ++P ++ + + R+ L I+ + + + + P V
Sbjct: 466 KKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITTKHMLPTVL 525
Query: 411 TGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNI 470
D A +R KS+ + P L T+ + L KL D++ ++ L +
Sbjct: 526 RMAGDPVANVRFNVAKSLQKIGPILDNSTLQSEVKPILEKLTQDQDVDVKYFAQEALTVL 585
Query: 471 A 471
+
Sbjct: 586 S 586
|
| >1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Length = 588 | Back alignment and structure |
|---|
Score = 73.1 bits (179), Expect = 2e-13
Identities = 41/300 (13%), Positives = 92/300 (30%), Gaps = 25/300 (8%)
Query: 248 NTASIPKSLLPDYQRLLSSMPSR-RLNSSKLIEN------SEYFQNKLVDTIHFMEILNL 300
+ ++P ++ R R + E + LV F ++
Sbjct: 235 PQEDLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGPEITKTDLVP--AFQNLMKD 292
Query: 301 KDSVEKDTFFRKLPNLAEQLP----RQIVLKKLLPLLASALEFGS-----AAAPALTALL 351
++ + K+ E L +++ ++LP + + + A A + L
Sbjct: 293 CEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVSDANQHVKSALASVIMGLS 352
Query: 352 KMGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVAT 411
+ L + +LP + +R+ ++ ++D + + + + + P +
Sbjct: 353 PI---LGKDNTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVE 409
Query: 412 GFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIA 471
D +R ++ M +LA +L L VD AIR T L +
Sbjct: 410 LAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLV 469
Query: 472 SHLNEGTRKRVLINAFTVRALRDTFSPAR-GAAKILSYLNCDVRSKAFQAVDQFLQIVKQ 530
+ +I + D R ++ L+ L V +
Sbjct: 470 EKFGKEWAHATIIPKV-LAMSGDPNYLHRMTTLFCINVLSEVCGQDITT--KHMLPTVLR 526
|
| >1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Length = 588 | Back alignment and structure |
|---|
Score = 68.5 bits (167), Expect = 5e-12
Identities = 41/333 (12%), Positives = 97/333 (29%), Gaps = 66/333 (19%)
Query: 241 SKTEELRNTA--------------SIPKSLLPDYQRLLSSMPSRRLNSSKLIEN------ 280
++ +LR + LLP + L ++ +
Sbjct: 21 NEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGTFTTLVG 80
Query: 281 SEYFQNKLVDTIHFMEILNLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLL------- 333
+ + L+ + + ++++V +D L ++ + + +PL+
Sbjct: 81 GPEYVHCLLPPL--ESLATVEETVVRDKAVESLRAISHEHSPSDLEAHFVPLVKRLAGGD 138
Query: 334 -----ASALEFGSAAAP----------------------------ALTALLKMGSWLSTE 360
SA S P A + L + L +
Sbjct: 139 WFTSRTSACGLFSVCYPRVSSAVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELD 198
Query: 361 EFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFL 420
+++P L + ++R+ ++ Q + ++ V P + D S +
Sbjct: 199 NVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPQEDLEALVMPTLRQAAEDKSWRV 258
Query: 421 REMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRK 480
R M L + L+ L D E +R + + +L+ R+
Sbjct: 259 RYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCRE 318
Query: 481 RVLINAF---TVRALRDTFSPAR-GAAKILSYL 509
V+++ + D + A ++ L
Sbjct: 319 NVIMSQILPCIKELVSDANQHVKSALASVIMGL 351
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 6e-11
Identities = 59/282 (20%), Positives = 100/282 (35%), Gaps = 50/282 (17%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNIL----AFLHSTEVEN 92
F+ +K D +I I N + VK L + HP I+ A+L E
Sbjct: 22 FEAKNKVDDCNYAIKRIRLPNREL-AREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEK 80
Query: 93 IDATSTKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYYAWG-LNQIAKAVSFLNNDCK 149
+ +S K+ +YI + L + + +R+ QIA+AV FL +
Sbjct: 81 LQPSSPKVYLYIQMQLCRKENLKDWMNGRC-TIEERERSVCLHIFLQIAEAVEFL-HSKG 138
Query: 150 LVH-----GNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWL-----VG- 198
L+H N+ T K+ F +++ D + E A+ VG
Sbjct: 139 LMHRDLKPSNIFF-----TMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGT 193
Query: 199 AQYKPVELAKS---DWTAVRKSPPWSIDSWGLGCLIYEL----FSGMRLSKT-EELRN-- 248
Y E K D + LG +++EL + M +T ++RN
Sbjct: 194 KLYMSPEQIHGNSYSH----KV-----DIFSLGLILFELLYPFSTQMERVRTLTDVRNLK 244
Query: 249 TASIPKSLLPDYQRLLSSM----PSRRLNSSKLIENSEYFQN 286
+ P ++ M P R + +IEN F++
Sbjct: 245 FPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN-AVFED 285
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 6e-11
Identities = 52/285 (18%), Positives = 93/285 (32%), Gaps = 44/285 (15%)
Query: 32 GSWSH-FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90
G +S+ DG ++ I QD A+ R HPNIL +
Sbjct: 40 GGFSYVDLVEGLHDGHFYALKRILCHEQQD--REEAQREADMHRLFNHPNILRLVAYC-- 95
Query: 91 ENIDATSTKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYYAWGL-NQIAKAVSFLNND 147
+ K +++ L +I+ L +G+ E L I + + + +
Sbjct: 96 --LRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAI-HA 152
Query: 148 CKLVH-----GNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWL--VG-A 199
H N+ L L +++ + E + + W
Sbjct: 153 KGYAHRDLKPTNILL-----GDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTI 207
Query: 200 QYKPVELAKSDWTAVRKSPP-WSIDSWGLGCLIYEL------FSGMRL---SKTEELRNT 249
Y+ EL ++ D W LGC++Y + + + S ++N
Sbjct: 208 SYRAPEL----FSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQ 263
Query: 250 ASIPKSLL--PDYQRLLSSM----PSRRLNSSKLIENSEYFQNKL 288
SIP+S +LL+SM P +R + L+ E Q
Sbjct: 264 LSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPA 308
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 61.4 bits (148), Expect = 9e-10
Identities = 74/540 (13%), Positives = 163/540 (30%), Gaps = 164/540 (30%)
Query: 70 VKRLRTV-RHPNILAFLHSTEVENIDATSTKITIYIVT--EPVMPLSEKIKEL------- 119
+ ++T R P+++ ++ + + + + Y V+ +P + L + + EL
Sbjct: 95 MSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVL 154
Query: 120 --GLEGSQRDEYYAWG---LNQIAKAVSFLNNDCKL---VH----GNVCLSSVVVTQTLD 167
G+ GS G + CK+ + N C S V + L
Sbjct: 155 IDGVLGS--------GKTWV--ALDVCLSYKVQCKMDFKIFWLNLKN-CNSPETVLEML- 202
Query: 168 WKLHAFDVLSEFDGNNEAANGPMLQYAW--------LVGAQYKPVELAKSD-WTAVRKSP 218
KL + + + ++ ++ L+ L Y+ L +
Sbjct: 203 QKLL-YQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQN------ 255
Query: 219 PWSIDSWGLGCLIYELFSGMRLSKTEELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLI 278
+ +++ L C I L T R + L +S L
Sbjct: 256 AKAWNAFNLSCKI--------LLTT---RF-KQVTDFLSAATTTHIS-----------LD 292
Query: 279 ENSEYFQNKLVDTIHFMEILNLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALE 338
+S V ++ ++ L+ + + LPR++ P S
Sbjct: 293 HHSMTLTPDEVKSL-LLKYLDCR---------------PQDLPREV--LTTNPRRLSI-- 332
Query: 339 FGSAAAPALTALLK--MGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSF 396
++ + +W + + + L TI++ + +L+ + + F
Sbjct: 333 IA--------ESIRDGLATWDNWKHVNCDKLTTIIESS--------LNVLEPAEYR-KMF 375
Query: 397 SAQVV---DEQVYPHV------ATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKY 447
V + + +D + ++ S++ PK S +I L+
Sbjct: 376 DRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLEL 435
Query: 448 LSKLQVDEEPAIR--------------TNTTILLGN-------IASHLNEGTR------- 479
K++++ E A+ ++ I I HL
Sbjct: 436 --KVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLF 493
Query: 480 KRVLIN-AFTVRALRDTFSPARGAAKILSYL------------NCDVRSKAFQAVDQFLQ 526
+ V ++ F + +R + + IL+ L N + A+ FL
Sbjct: 494 RMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLP 553
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.5 bits (104), Expect = 2e-04
Identities = 52/332 (15%), Positives = 108/332 (32%), Gaps = 73/332 (21%)
Query: 231 IYELFSGMRLSKTEELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKLVD 290
LF + + E ++ + + L +Y+ L+S + + + S + +++L +
Sbjct: 64 TLRLFWTLLSKQEEMVQ--KFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYN 121
Query: 291 TIHFMEILNLKDSVEKDTFFRKLPNLAEQL-PRQIVL--------KKLLPLLASALEFGS 341
K +V + + KL +L P + VL K + AL+
Sbjct: 122 DNQVFA----KYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWV-----ALD--- 169
Query: 342 AAAPALTALLKMGS---WLS-TEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFS 397
+ KM WL+ S + + +++ LL ID S S
Sbjct: 170 -VCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQ-----------KLLYQIDPNWTSRS 217
Query: 398 AQVVDEQVYPHVATGFADTSAFLREMTLK-SMLVLAPKLSQRTI-SGSLLKYLSKLQVDE 455
+ ++ H A+ L+ + +LVL + + + L
Sbjct: 218 DHSSNIKLRIHSIQ--AELRRLLKSKPYENCLLVL------LNVQNAKAWNAFN-LSC-- 266
Query: 456 EPAIRTNTTILL----GNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKILSYLNC 511
ILL + L+ T + ++ T +P + +L YL+C
Sbjct: 267 --------KILLTTRFKQVTDFLSAATTTHISLDH-----HSMTLTPDEVKSLLLKYLDC 313
Query: 512 DVRSKAFQAVDQFLQ----IVKQYHEKTNTGD 539
+ + + + I + + T D
Sbjct: 314 RPQDLPREVLTTNPRRLSIIAESIRDGLATWD 345
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 1e-08
Identities = 55/302 (18%), Positives = 105/302 (34%), Gaps = 75/302 (24%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHS-----TEVE 91
+ + D +I I T + L+ + V L ++ H ++ + + V+
Sbjct: 23 VKARNALDSRYYAIKKIRHTEEK---LSTILSEVMLLASLNHQYVVRYYAAWLERRNFVK 79
Query: 92 NIDATSTKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGL-NQIAKAVSFLNNDC 148
+ A K T++I E L + I E + W L QI +A+S++ +
Sbjct: 80 PMTAVKKKSTLFIQMEYCENGTLYDLIHS---ENLNQQRDEYWRLFRQILEALSYI-HSQ 135
Query: 149 KLVH-------------GNVCLS----SVVVTQTLDWKLHAFDVLSEFDGNNEAANG-PM 190
++H NV + + V ++LD L N +A G M
Sbjct: 136 GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAM 195
Query: 191 LQYAWLVGA----QYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYEL----FSGMRLSK 242
Y A K D +S LG + +E+ +GM +
Sbjct: 196 --YV----ATEVLDGTGHYNEKIDM--------YS-----LGIIFFEMIYPFSTGM--ER 234
Query: 243 TEELRNTASIPKSLLPDY--------QRLLSSM----PSRRLNSSKLIENSEYFQNKLVD 290
L+ S+ PD+ ++++ + P++R + L+ NS + K D
Sbjct: 235 VNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLL-NSGWLPVKHQD 293
Query: 291 TI 292
+
Sbjct: 294 EV 295
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 2e-08
Identities = 50/274 (18%), Positives = 77/274 (28%), Gaps = 72/274 (26%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDA 95
F+ SK+DG ++ A V V +HP + + E I
Sbjct: 74 FKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGI-- 131
Query: 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWG-LNQIAKAVSFLNNDCKLVH- 152
+Y+ TE L + + G+ E WG L A++ L+ LVH
Sbjct: 132 ------LYLQTELCGPSLQQHCEA---WGASLPEAQVWGYLRDTLLALAHLH-SQGLVHL 181
Query: 153 ----GNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVG---------- 198
N+ L KL F +L E G
Sbjct: 182 DVKPANIFL-----GPRGRCKLGDFGLLVELGTAGAGE--------VQEGDPRYMAPELL 228
Query: 199 -AQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL----SKTEELRNT---A 250
Y +D + LG I E+ M L ++LR
Sbjct: 229 QGSYGT----AADV-------------FSLGLTILEVACNMELPHGGEGWQQLRQGYLPP 271
Query: 251 SIPKSLLPDYQRLLSSM----PSRRLNSSKLIEN 280
L + + +L M P R + L+
Sbjct: 272 EFTAGLSSELRSVLVMMLEPDPKLRATAEALLAL 305
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 2e-08
Identities = 53/273 (19%), Positives = 89/273 (32%), Gaps = 56/273 (20%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
+ K DG + + + + + V LR ++HPNI+ +
Sbjct: 23 QKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDR----- 77
Query: 97 STKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYYAWG-LNQIAKAVSFL----NNDCK 149
T T+YIV E L+ I + E DE + + Q+ A+ +
Sbjct: 78 -TNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHT 136
Query: 150 LVH-----GNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGA-QYKP 203
++H NV L + KL F + + + A VG Y
Sbjct: 137 VLHRDLKPANVFL-----DGKQNVKLGDFGLARILNHDTSFAKT-------FVGTPYYMS 184
Query: 204 VELAKS---DWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---------NTAS 251
E + KS D W LGCL+YEL + M +
Sbjct: 185 PEQMNRMSYNE----KS-----DIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR 235
Query: 252 IPKSLLPDYQRLLSSM----PSRRLNSSKLIEN 280
IP + +++ M R + +++EN
Sbjct: 236 IPYRYSDELNEIITRMLNLKDYHRPSVEEILEN 268
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 9e-08
Identities = 47/272 (17%), Positives = 96/272 (35%), Gaps = 45/272 (16%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDA 95
F+ + DG +I A A V + +H +++ + S E+
Sbjct: 28 FKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY-FSAWAEDD-- 84
Query: 96 TSTKITIYIVTEPVMP--LSEKIKELGLEGSQRDEYYAWG-LNQIAKAVSFLNNDCKLVH 152
+ I E L++ I E S E L Q+ + + +++ LVH
Sbjct: 85 -----HMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH-SMSLVH 138
Query: 153 -----GNVCLSSVVVTQTLDWKLHAFDVLSEFD-------GNNEAANGPMLQYAWLVG-A 199
N+ +S + + D S G+ + P ++ G +
Sbjct: 139 MDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVE----EGDS 194
Query: 200 QYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LRNTA--SIP 253
++ E+ + ++T + K+ D + L + L + + +R IP
Sbjct: 195 RFLANEVLQENYTHLPKA-----DIFALALTVVCAAGAEPLPRNGDQWHEIRQGRLPRIP 249
Query: 254 KSLLPDYQRLLSSM----PSRRLNSSKLIENS 281
+ L ++ LL M P RR ++ L+++S
Sbjct: 250 QVLSQEFTELLKVMIHPDPERRPSAMALVKHS 281
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 2e-07
Identities = 43/253 (16%), Positives = 82/253 (32%), Gaps = 54/253 (21%)
Query: 66 ARNGVKRLRTVRHPNILAFLHS--------TEVENIDATSTKITIYIVTE--PVMPLSEK 115
A VK L + H NI+ + + S ++I E L +
Sbjct: 51 AEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQW 110
Query: 116 IKELGLEGSQRDEYYAWG-LNQIAKAVSFLNNDCKLVH-----GNVCLSSVVVTQTLDWK 169
I++ G + D+ A QI K V ++ + KL++ N+ L T K
Sbjct: 111 IEKRR--GEKLDKVLALELFEQITKGVDYI-HSKKLINRDLKPSNIFL-----VDTKQVK 162
Query: 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTA--VRKSPPWS--IDSW 225
+ F +++ + + G + + S + +D +
Sbjct: 163 IGDFGLVTSLKNDGKRTR--------SKGTLR---------YMSPEQISSQDYGKEVDLY 205
Query: 226 GLGCLIYEL----FSGMRLSKTEELRNTASIPKSLLPDYQRLLSSM----PSRRLNSSKL 277
LG ++ EL + SK I + LL + P R N+S++
Sbjct: 206 ALGLILAELLHVCDTAFETSKFFTDLRDGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEI 265
Query: 278 IENSEYFQNKLVD 290
+ + K +
Sbjct: 266 L-RTLTVWKKSPE 277
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 50.9 bits (122), Expect = 8e-07
Identities = 52/277 (18%), Positives = 100/277 (36%), Gaps = 58/277 (20%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
S +DG I I+ + +R V L ++HPNI+ + S E
Sbjct: 41 ILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENG---- 96
Query: 97 STKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYYAWG-LNQIAKAVSFLNNDCKLVHG 153
++YIV + L ++I +G E QI A+ + +D K++H
Sbjct: 97 ----SLYIVMDYCEGGDLFKRINA--QKGVLFQEDQILDWFVQICLALKHV-HDRKILHR 149
Query: 154 NVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQY--KPVEL----- 206
++ ++ +T+ +L F + + E A +G Y P E+
Sbjct: 150 DIKSQNIFLTKDGTVQLGDFGIARVLNSTVELAR-------ACIGTPYYLSP-EICENKP 201
Query: 207 --AKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---------NTASIPKS 255
KSD W LGC++YEL + + ++ + +
Sbjct: 202 YNNKSDI-------------WALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLH 248
Query: 256 LLPDYQRLLSSM----PSRRLNSSKLIENSEYFQNKL 288
D + L+S + P R + + ++E + ++
Sbjct: 249 YSYDLRSLVSQLFKRNPRDRPSVNSILEKG-FIAKRI 284
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 48.4 bits (115), Expect = 5e-06
Identities = 35/263 (13%), Positives = 78/263 (29%), Gaps = 52/263 (19%)
Query: 71 KRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVM--PLSEKIKELGLEGSQR-- 126
+RL+ + F + +N +V E L I +
Sbjct: 119 ERLKPSMQHMFMKFYSAHLFQN--------GSVLVGELYSYGTLLNAINLYKNTPEKVMP 170
Query: 127 DEYYAWGLNQIAKAVSFLNNDCKLVHGNV----CLSSVVVTQTLDWKLHAFDV-LSEF-- 179
++ + ++ DC+++HG++ + + D + + L +
Sbjct: 171 QGLVISFAMRMLYMIEQVH-DCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQ 229
Query: 180 --DGNNEAANGPMLQYAWLVGAQ-YKPVE-LAKSDWTAVRKSPPWSIDSWGLGCLIYELF 235
D ++ VE L+ W + ID +G+ +Y +
Sbjct: 230 SIDMKLFPKGTIFTAKC---ETSGFQCVEMLSNKPWN-------YQIDYFGVAATVYCML 279
Query: 236 SGMRLSKTEELRNTASIPKSLLPDY----------QRLLSSMPSRRLNSSKLIEN----- 280
G + E P+ L +L+ L S L+
Sbjct: 280 FGTYMKVKNE--GGECKPEGLFRRLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKV 337
Query: 281 -SEYFQNKLVDTIHFMEILNLKD 302
+++ NK+ + + +L L+
Sbjct: 338 FQQHYTNKIRALRNRLIVLLLEC 360
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 6e-06
Identities = 49/280 (17%), Positives = 103/280 (36%), Gaps = 49/280 (17%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGH-LAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95
++ DG PV++ + + D A + L+ + HPN++ + S +N
Sbjct: 49 YRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN--- 105
Query: 96 TSTKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYYAWG-LNQIAKAVSFLNNDCKLVH 152
+ IV E LS IK + E W Q+ A+ + + +++H
Sbjct: 106 -----ELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM-HSRRVMH 159
Query: 153 GNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWT 212
++ ++V +T T KL + F AA+ LVG Y +
Sbjct: 160 RDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS-------LVGTPY---------YM 203
Query: 213 A---VRKSP-PWSIDSWGLGCLIYELFSGMR--LSKTEELR---------NTASIPKSLL 257
+ + ++ + D W LGCL+YE+ + L + +P
Sbjct: 204 SPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHY 263
Query: 258 -PDYQRLLSSM----PSRRLNSSKLIENSEYFQNKLVDTI 292
+ ++L++ P +R + + + + ++ ++
Sbjct: 264 SEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSL 303
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 43.8 bits (103), Expect = 1e-04
Identities = 34/224 (15%), Positives = 69/224 (30%), Gaps = 33/224 (14%)
Query: 73 LRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAW 132
++ + ++ + S + + E + +
Sbjct: 152 VKDPQKKKMIRVRLDERDMWV--LSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARL 209
Query: 133 GL-NQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPML 191
L Q+ + ++ L+ LVH + +V+ Q L F+ L ++
Sbjct: 210 QLTLQVIRLLASLH-HYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVSR-- 266
Query: 192 QYAWLVGAQYKPVELAKSDWTAVRKSPP-----WSIDSWGLGCLIYEL------FSGMRL 240
++P EL T +S D+W LG +IY + +
Sbjct: 267 --------GFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAA 318
Query: 241 SKTEE--LRNTASIP---KSLLPDYQRLLSSMPSRRLNSSKLIE 279
E R+ +IP ++LL + L RL + +E
Sbjct: 319 LGGSEWIFRSCKNIPQPVRALL---EGFLRYPKEDRLLPLQAME 359
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 42.9 bits (101), Expect = 3e-04
Identities = 46/288 (15%), Positives = 97/288 (33%), Gaps = 44/288 (15%)
Query: 22 NIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNI 81
I + + W + + D + S + + A ++R+ N
Sbjct: 65 GIVRYFNA-WLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNT 123
Query: 82 LAFLHSTEVENIDATSTKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYYAWGL-NQIA 138
+ L + K+ +YI + L + + R+ + QIA
Sbjct: 124 VGQLQPSS--------PKVYLYIQMQLCRKENLKDWMNR-RCSLEDREHGVCLHIFIQIA 174
Query: 139 KAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF-----DVLSEFDGNNEAANGPMLQY 193
+AV FL+ L+H ++ S++ T K+ F E + +
Sbjct: 175 EAVEFLH-SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATH 233
Query: 194 AWLVGAQYKPVELAKSDWTA--VRKSPPWS--IDSWGLGCLIYELF----SGMRLSKT-E 244
VG + + + +S +D + LG +++EL + M +
Sbjct: 234 TGQVGTKL---------YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIIT 284
Query: 245 ELRN--TASIPKSLLPDYQRLLSSM----PSRRLNSSKLIENSEYFQN 286
++RN + P ++ M P+ R ++ +IE + F+N
Sbjct: 285 DVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIE-NAIFEN 331
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397 | Back alignment and structure |
|---|
Score = 42.6 bits (100), Expect = 4e-04
Identities = 30/216 (13%), Positives = 70/216 (32%), Gaps = 39/216 (18%)
Query: 104 IVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHG-----NVCL 157
+V E + L + I + +G + Q+ + + +L+ C+++H N+ L
Sbjct: 122 MVFEVLGHHLLKWIIKSNYQGLPLP-CVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILL 180
Query: 158 SS------VVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDW 211
S + + +W+ S + A L + +++ +D
Sbjct: 181 SVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADL 240
Query: 212 TAVRKSP---------------------PWS--IDSWGLGCLIYELFSGMRLSKTEELRN 248
++ D W C+ +EL +G L +
Sbjct: 241 GNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHS-GE 299
Query: 249 TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284
+ + + LL +P + + + K + E+F
Sbjct: 300 EYTRDEDHIALIIELLGKVPRKLIVAGK--YSKEFF 333
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 7e-04
Identities = 48/277 (17%), Positives = 96/277 (34%), Gaps = 43/277 (15%)
Query: 32 GSWSH-FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTE 89
G ++ ++ G ++ + + A V ++ + HPNI+ F +
Sbjct: 39 GGFAFVYEAQDVGSGREYALKRLLSNEEEK--NRAIIQEVCFMKKLSGHPNIVQFCSAAS 96
Query: 90 VENIDATSTKITIYIVTE-PVMPLSEKIKELGLEGS-QRDEYYAWGLNQIAKAVSFL-NN 146
+ ++ + + ++TE L E +K++ G D Q +AV +
Sbjct: 97 IGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKI-FYQTCRAVQHMHRQ 155
Query: 147 DCKLVH-----GNVCLSSVVVTQTLDWKLHAF----DVLSEFDGNNEAANGPMLQ--YAW 195
++H N+ LS+ KL F + D + A +++
Sbjct: 156 KPPIIHRDLKVENLLLSN-----QGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITR 210
Query: 196 LVGAQYKPVELAKSDWTAVRKSP-PWSIDSWGLGCLIYEL------FSGMRLSKTEELRN 248
Y+ E+ P D W LGC++Y L F +K +
Sbjct: 211 NTTPMYRTPEI----IDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDG--AKLRIVNG 264
Query: 249 TASIPKSLL--PDYQRLLSSM----PSRRLNSSKLIE 279
SIP + L+ +M P RL+ ++++
Sbjct: 265 KYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVH 301
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 7e-04
Identities = 30/183 (16%), Positives = 62/183 (33%), Gaps = 24/183 (13%)
Query: 62 HLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDATSTKITIYIVTEPV-MPLSEKIKEL 119
+ A V+ LR HPN++ + + + YI E L E +++
Sbjct: 60 CFSFADREVQLLRESDEHPNVIRYFCTEKDRQ--------FQYIAIELCAATLQEYVEQK 111
Query: 120 GLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVH-----GNVCLSSVVVTQTLDWKLHAFD 174
+ L Q ++ L+ +VH N+ +S + + F
Sbjct: 112 DFAHLGLEPITL--LQQTTSGLAHLH-SLNIVHRDLKPHNILISMPNAHGKIKAMISDFG 168
Query: 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYEL 234
L + + G + E+ D +++P +++D + GC+ Y +
Sbjct: 169 -LCKKLAVGRHSFSRRSGVPGTEG--WIAPEMLSED---CKENPTYTVDIFSAGCVFYYV 222
Query: 235 FSG 237
S
Sbjct: 223 ISE 225
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 771 | |||
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 99.98 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 99.98 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 99.98 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 99.98 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 99.98 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 99.98 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 99.98 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 99.98 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 99.98 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 99.98 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 99.98 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 99.98 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 99.98 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 99.98 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 99.98 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 99.98 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 99.98 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 99.98 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.98 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 99.98 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 99.98 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 99.98 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 99.98 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 99.97 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 99.97 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 99.97 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 99.97 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 99.97 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 99.97 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 99.97 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 99.97 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 99.97 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 99.97 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 99.97 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 99.97 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 99.97 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 99.97 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 99.97 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 99.97 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 99.97 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 99.97 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 99.97 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 99.97 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 99.97 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 99.97 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 99.97 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 99.97 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 99.97 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 99.97 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 99.97 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 99.97 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 99.97 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.96 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 99.95 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.91 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.76 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.73 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.61 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.36 | |
| 1b3u_A | 588 | Protein (protein phosphatase PP2A); scaffold prote | 99.3 | |
| 1b3u_A | 588 | Protein (protein phosphatase PP2A); scaffold prote | 99.27 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 98.75 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 98.62 | |
| 2qk2_A | 242 | LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2 | 98.6 | |
| 2qk2_A | 242 | LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2 | 98.41 | |
| 1ibr_B | 462 | P95, importin beta-1 subunit, nuclear factor; smal | 98.34 | |
| 3ltm_A | 211 | Alpha-REP4; protein engineering, heat-like repeat, | 98.34 | |
| 3ltj_A | 201 | Alpharep-4; protein engineering, heat-like repeat, | 98.27 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 98.2 | |
| 2qk1_A | 249 | Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, h | 98.17 | |
| 4fdd_A | 852 | Transportin-1; heat repeats, karyopherin, nuclear | 98.16 | |
| 3ltm_A | 211 | Alpha-REP4; protein engineering, heat-like repeat, | 98.12 | |
| 3ltj_A | 201 | Alpharep-4; protein engineering, heat-like repeat, | 98.12 | |
| 4fdd_A | 852 | Transportin-1; heat repeats, karyopherin, nuclear | 98.1 | |
| 1u6g_C | 1230 | TIP120 protein, CAND1; cullin repeat, heat repeat, | 98.09 | |
| 4hxt_A | 252 | De novo protein OR329; structural genomics, PSI-bi | 98.04 | |
| 1ibr_B | 462 | P95, importin beta-1 subunit, nuclear factor; smal | 98.04 | |
| 1u6g_C | 1230 | TIP120 protein, CAND1; cullin repeat, heat repeat, | 98.0 | |
| 2bpt_A | 861 | Importin beta-1 subunit; nuclear transport, nucleo | 98.0 | |
| 2bpt_A | 861 | Importin beta-1 subunit; nuclear transport, nucleo | 97.97 | |
| 4db6_A | 210 | Armadillo repeat protein; solenoid repeat, armadil | 97.95 | |
| 2jdq_A | 450 | Importin alpha-1 subunit; transport, PB2 subunit, | 97.9 | |
| 4db8_A | 252 | Armadillo-repeat protein; solenoid repeat, de novo | 97.85 | |
| 2jdq_A | 450 | Importin alpha-1 subunit; transport, PB2 subunit, | 97.84 | |
| 1oyz_A | 280 | Hypothetical protein YIBA; structural genomics, PS | 97.83 | |
| 1qgr_A | 876 | Protein (importin beta subunit); transport recepto | 97.74 | |
| 4hxt_A | 252 | De novo protein OR329; structural genomics, PSI-bi | 97.73 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 97.68 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 97.68 | |
| 1oyz_A | 280 | Hypothetical protein YIBA; structural genomics, PS | 97.67 | |
| 1wa5_B | 530 | Importin alpha subunit; nuclear transport/complex, | 97.66 | |
| 1wa5_B | 530 | Importin alpha subunit; nuclear transport/complex, | 97.66 | |
| 1qgr_A | 876 | Protein (importin beta subunit); transport recepto | 97.64 | |
| 4b8j_A | 528 | Importin subunit alpha-1A; transport protein, nucl | 97.63 | |
| 2vgl_B | 591 | AP-2 complex subunit beta-1; cytoplasmic vesicle, | 97.62 | |
| 2qk1_A | 249 | Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, h | 97.59 | |
| 4db8_A | 252 | Armadillo-repeat protein; solenoid repeat, de novo | 97.53 | |
| 4b8j_A | 528 | Importin subunit alpha-1A; transport protein, nucl | 97.53 | |
| 3tpo_A | 529 | Importin subunit alpha-2; nuclear import, protein | 97.5 | |
| 2vgl_B | 591 | AP-2 complex subunit beta-1; cytoplasmic vesicle, | 97.44 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 97.43 | |
| 3ul1_B | 510 | Importin subunit alpha-2; arm repeat, armadillo re | 97.41 | |
| 3tjz_B | 355 | Coatomer subunit gamma; protein trafficking, golgi | 97.33 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 97.2 | |
| 4ffb_C | 278 | Protein STU2; tubulin fold, heat repeats, cytoskel | 97.19 | |
| 4db6_A | 210 | Armadillo repeat protein; solenoid repeat, armadil | 97.18 | |
| 3tpo_A | 529 | Importin subunit alpha-2; nuclear import, protein | 97.18 | |
| 1w63_A | 618 | Adapter-related protein complex 1 gamma 1 subunit; | 97.17 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 97.17 | |
| 1te4_A | 131 | Conserved protein MTH187; methanobacterium thermoa | 97.16 | |
| 4ffb_C | 278 | Protein STU2; tubulin fold, heat repeats, cytoskel | 97.01 | |
| 3ul1_B | 510 | Importin subunit alpha-2; arm repeat, armadillo re | 96.95 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 96.76 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 96.73 | |
| 1xqr_A | 296 | HSPBP1 protein; armadillo repeat, superhelical twi | 96.65 | |
| 1w63_A | 618 | Adapter-related protein complex 1 gamma 1 subunit; | 96.61 | |
| 2vgl_A | 621 | Adaptor protein complex AP-2, alpha 2 subunit; cyt | 96.52 | |
| 2of3_A | 266 | ZYG-9; multifunctional macromolecule, kinetochore, | 96.49 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 96.39 | |
| 1te4_A | 131 | Conserved protein MTH187; methanobacterium thermoa | 96.29 | |
| 1xqr_A | 296 | HSPBP1 protein; armadillo repeat, superhelical twi | 96.24 | |
| 2z6h_A | 644 | Catenin beta-1, beta-catenin; C-terminal domain, a | 96.05 | |
| 2vgl_A | 621 | Adaptor protein complex AP-2, alpha 2 subunit; cyt | 95.97 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 95.94 | |
| 2z6g_A | 780 | B-catenin; FULL-length, beta-catenin, cell adhesio | 95.76 | |
| 2z6h_A | 644 | Catenin beta-1, beta-catenin; C-terminal domain, a | 95.7 | |
| 1jdh_A | 529 | Beta-catenin; beta-catenin, protein-protein comple | 95.7 | |
| 2of3_A | 266 | ZYG-9; multifunctional macromolecule, kinetochore, | 95.69 | |
| 1jdh_A | 529 | Beta-catenin; beta-catenin, protein-protein comple | 95.63 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 95.42 | |
| 2iw3_A | 986 | Elongation factor 3A; acetylation, ATP-binding, pr | 95.11 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 95.06 | |
| 1xm9_A | 457 | Plakophilin 1; armadillo repeat, cell adhesion; 2. | 94.75 | |
| 2z6g_A | 780 | B-catenin; FULL-length, beta-catenin, cell adhesio | 94.74 | |
| 3l9t_A | 240 | Putative uncharacterized protein SMU.31; hypotheti | 94.71 | |
| 3now_A | 810 | UNC-45 protein, SD10334P; armadillo repeat, HSP90, | 94.5 | |
| 3oc3_A | 800 | Helicase MOT1, MOT1; regulation of transcription, | 94.44 | |
| 3nmw_A | 354 | APC variant protein; ARMADIILO repeats domain, cel | 94.44 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 94.33 | |
| 2iw3_A | 986 | Elongation factor 3A; acetylation, ATP-binding, pr | 94.3 | |
| 3now_A | 810 | UNC-45 protein, SD10334P; armadillo repeat, HSP90, | 94.15 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 94.06 | |
| 3nmz_A | 458 | APC variant protein; protein-protein complex, arma | 93.88 | |
| 1lrv_A | 244 | LRV, leucine-rich repeat variant; leucine-rich rep | 93.88 | |
| 3b2a_A | 265 | TON_1937, putative uncharacterized protein; heat-r | 93.22 | |
| 1wa5_C | 960 | Importin alpha RE-exporter; nuclear transport/comp | 92.9 | |
| 3nmw_A | 354 | APC variant protein; ARMADIILO repeats domain, cel | 92.64 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 92.58 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 92.29 | |
| 3tjz_B | 355 | Coatomer subunit gamma; protein trafficking, golgi | 92.19 | |
| 3b2a_A | 265 | TON_1937, putative uncharacterized protein; heat-r | 90.45 | |
| 1xm9_A | 457 | Plakophilin 1; armadillo repeat, cell adhesion; 2. | 89.26 | |
| 1wa5_C | 960 | Importin alpha RE-exporter; nuclear transport/comp | 89.02 | |
| 1lrv_A | 244 | LRV, leucine-rich repeat variant; leucine-rich rep | 88.65 | |
| 2x19_B | 963 | Importin-13; nuclear transport, protein transport; | 87.31 | |
| 2x1g_F | 971 | Cadmus; transport protein, developmental protein, | 86.47 | |
| 2x1g_F | 971 | Cadmus; transport protein, developmental protein, | 86.04 | |
| 3l6x_A | 584 | Catenin delta-1; catenin, armadillo, ARM, JMD, CE | 85.71 | |
| 3nmz_A | 458 | APC variant protein; protein-protein complex, arma | 85.24 | |
| 3gs3_A | 257 | Symplekin, LD45768P; helix-turn-helix heat repeat | 84.07 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 82.31 | |
| 4ady_A | 963 | RPN2, 26S proteasome regulatory subunit RPN2; prot | 82.13 | |
| 3i1a_A | 339 | Spectinomycin phosphotransferase; protein kinase, | 80.34 | |
| 2qg7_A | 458 | Ethanolamine kinase PV091845; malaria, SGC, struct | 80.24 |
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-45 Score=397.64 Aligned_cols=241 Identities=20% Similarity=0.260 Sum_probs=198.5
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.++||.|+ | +||+|+++.+|+.||||++.+....+...+.+++|+++|++|+||||++++++++++
T Consensus 25 ~Y~~~~~lG~G~fg--~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~------- 95 (350)
T 4b9d_A 25 KYVRLQKIGEGSFG--KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEEN------- 95 (350)
T ss_dssp CEEEEEEC--------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET-------
T ss_pred ceEEeEEEecCCCe--EEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEEC-------
Confidence 799999999999 9 999999999999999999998766666678899999999999999999999999874
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+||||||| ++|.++|....... ..+..+..++.||+.||.|||+ .+||||||||+|||++.+|.+||+|||++
T Consensus 96 -~~~yiVmEy~~gg~L~~~i~~~~~~~-~~e~~~~~~~~qi~~aL~ylH~-~~IiHRDlKp~NILl~~~g~vKl~DFGla 172 (350)
T 4b9d_A 96 -GSLYIVMDYCEGGDLFKRINAQKGVL-FQEDQILDWFVQICLALKHVHD-RKILHRDIKSQNIFLTKDGTVQLGDFGIA 172 (350)
T ss_dssp -TEEEEEEECCTTCBHHHHHHHTTTCC-CCHHHHHHHHHHHHHHHHHHHH-TTCEETTCCGGGEEECTTCCEEECSTTEE
T ss_pred -CEEEEEEeCCCCCcHHHHHHHcCCCC-CCHHHHHHHHHHHHHHHHHHHH-CCeeeccCCHHHEEECCCCCEEEcccccc
Confidence 4899999999 58999998654222 2234456679999999999997 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc--------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN-------- 248 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~-------- 248 (771)
+...... ......+++..|+|||++.+ ..++.++|||||||++|||++|.+||.......
T Consensus 173 ~~~~~~~------~~~~~~~GT~~YmAPE~l~~------~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~ 240 (350)
T 4b9d_A 173 RVLNSTV------ELARACIGTPYYLSPEICEN------KPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISG 240 (350)
T ss_dssp SCCCHHH------HHHHHHHSCCTTCCHHHHTT------CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT
T ss_pred eeecCCc------ccccccCCCccccCHHHHCC------CCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcC
Confidence 8765311 11123356679999999986 467889999999999999999999996543211
Q ss_pred -----cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 249 -----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 249 -----~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
...+|..+.+++.+||..||.+||++.++|+| +||.
T Consensus 241 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h-p~~~ 281 (350)
T 4b9d_A 241 SFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK-GFIA 281 (350)
T ss_dssp CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS-HHHH
T ss_pred CCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC-HHhh
Confidence 13567789999999999999999999999998 4554
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-45 Score=384.78 Aligned_cols=241 Identities=17% Similarity=0.225 Sum_probs=190.2
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
.+|++.+.||+|+ | +||+|+++.+|+.||||++++....+ .....+.+|+++|++|+||||++++++++++
T Consensus 13 g~Y~i~~~lG~G~fg--~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~----- 85 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFG--KVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSK----- 85 (275)
T ss_dssp -CCEEEEEEEC---C--CEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECS-----
T ss_pred eCeEEEEEEecCcCe--EEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC-----
Confidence 3799999999999 9 99999999999999999998764332 3456789999999999999999999999874
Q ss_pred CcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 97 ~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
+.+||||||| ++|.++|.+.+.. ....++.++.||+.||+|||+ .+|+||||||+||+++.+|.+||+|||+
T Consensus 86 ---~~~~ivmEy~~g~L~~~l~~~~~l---~e~~~~~~~~qi~~al~ylH~-~~IiHRDiKP~NILl~~~~~vkl~DFGl 158 (275)
T 3hyh_A 86 ---DEIIMVIEYAGNELFDYIVQRDKM---SEQEARRFFQQIISAVEYCHR-HKIVHRDLKPENLLLDEHLNVKIADFGL 158 (275)
T ss_dssp ---SEEEEEEECCCEEHHHHHHHSCSC---CHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCTTTEEECTTCCEEECCSSC
T ss_pred ---CEEEEEEeCCCCCHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCcccccCChHHeEECCCCCEEEeecCC
Confidence 4899999999 6799999876532 344567779999999999997 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc-------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------- 248 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~------- 248 (771)
++...... ......++..|+|||++.+. ..++.++|||||||++|+|++|..||.......
T Consensus 159 a~~~~~~~-------~~~~~~GT~~Y~APE~~~~~-----~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~ 226 (275)
T 3hyh_A 159 SNIMTDGN-------FLKTSCGSPNYAAPEVISGK-----LYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISN 226 (275)
T ss_dssp C----------------------CTTSCHHHHSSS-----SCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred CeecCCCC-------ccCCeeECcccCChhhhcCC-----CCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc
Confidence 98664421 11234566799999999763 234578999999999999999999996543211
Q ss_pred -----cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 249 -----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 249 -----~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
...+++.+.+++.+||..||.+|||+.++++| +||+.
T Consensus 227 ~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h-pw~k~ 268 (275)
T 3hyh_A 227 GVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD-DWFKV 268 (275)
T ss_dssp TCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC-HHHHT
T ss_pred CCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcC-ccccc
Confidence 13467789999999999999999999999999 56644
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-44 Score=390.72 Aligned_cols=239 Identities=18% Similarity=0.206 Sum_probs=200.4
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
+...|++.++||.|+ | +||+|+++.+|+.||||++++.... ..+.+.+|+++|++|+||||++++++++++
T Consensus 72 p~~~y~~~~~iG~G~fG--~V~~a~~~~tg~~vAiK~i~~~~~~--~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~---- 143 (346)
T 4fih_A 72 PRSYLDNFIKIGEGSTG--IVCIATVRSSGKLVAVKKMDLRKQQ--RRELLFNEVVIMRDYQHENVVEMYNSYLVG---- 143 (346)
T ss_dssp GGGTEEEEEEEEECSSC--EEEEEEETTTCCEEEEEEEEGGGCS--SGGGGHHHHHHHHHCCCTTBCCEEEEEEET----
T ss_pred hhHhcEEeEEeecCcCe--EEEEEEECCCCCEEEEEEEecCchh--HHHHHHHHHHHHHhCCCCCCCcEEEEEEEC----
Confidence 345699999999999 9 9999999999999999999865333 234678999999999999999999999974
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
+++||||||| ++|.+++.+..+ .+..++.++.||+.||.|||+ .+||||||||+|||++.+|.+||+||
T Consensus 144 ----~~~~ivmEy~~gg~L~~~l~~~~l----~e~~~~~~~~qi~~aL~ylH~-~~IiHRDlKp~NILl~~~g~vKl~DF 214 (346)
T 4fih_A 144 ----DELWVVMEFLEGGALTDIVTHTRM----NEEQIAAVCLAVLQALSVLHA-QGVIHRDIKSDSILLTHDGRVKLSDF 214 (346)
T ss_dssp ----TEEEEEECCCTTEEHHHHHHHSCC----CHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEECTTCCEEECCC
T ss_pred ----CEEEEEEeCCCCCcHHHHHHcCCC----CHHHHHHHHHHHHHHHHHHHH-CCcccccCCHHHEEECCCCCEEEecC
Confidence 4899999999 579999987543 345567779999999999997 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------- 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l------- 246 (771)
|+++.+..... .....+++..|+|||++.+ ..|+.++|||||||++|||++|.+||.....
T Consensus 215 Gla~~~~~~~~------~~~~~~GTp~YmAPEvl~~------~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i 282 (346)
T 4fih_A 215 GFCAQVSKEVP------RRKSLVGTPYWMAPELISR------LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI 282 (346)
T ss_dssp TTCEECCSSSC------CBCCCCSCGGGCCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH
T ss_pred cCceecCCCCC------cccccccCcCcCCHHHHCC------CCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH
Confidence 99987754321 1223355669999999876 4678999999999999999999999865321
Q ss_pred --------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 247 --------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 247 --------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
.....+++.+.+++.+||..||++||++.++|+| +||.
T Consensus 283 ~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H-p~~~ 328 (346)
T 4fih_A 283 RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH-PFLA 328 (346)
T ss_dssp HHSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC-GGGG
T ss_pred HcCCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC-Hhhc
Confidence 1123577889999999999999999999999999 5564
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-44 Score=388.38 Aligned_cols=242 Identities=14% Similarity=0.251 Sum_probs=200.4
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
+|++++.||+|+ | +||+|+++.+|+.||||++++... .+...+.+.+|+++|++|+||||++++++++++
T Consensus 33 dy~i~~~lG~G~fg--~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~------ 104 (311)
T 4aw0_A 33 DFKFGKILGEGSFS--TVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDD------ 104 (311)
T ss_dssp GEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS------
T ss_pred ccEEEEEEecccCe--EEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC------
Confidence 599999999998 8 999999999999999999986432 223467789999999999999999999999874
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
.++||||||| ++|.++|++.+.. .+..++.++.||+.||.|||+ .+|+||||||+|||++.+|.+||+|||+
T Consensus 105 --~~~yivmEy~~gG~L~~~i~~~~~l---~e~~~~~~~~qi~~al~ylH~-~~IiHRDlKPeNILl~~~g~vKl~DFGl 178 (311)
T 4aw0_A 105 --EKLYFGLSYAKNGELLKYIRKIGSF---DETCTRFYTAEIVSALEYLHG-KGIIHRDLKPENILLNEDMHIQITDFGT 178 (311)
T ss_dssp --SEEEEEECCCTTEEHHHHHHHHSSC---CHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred --CEEEEEEecCCCCCHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCCccCCCCHHHeEEcCCCCEEEEEcCC
Confidence 4899999999 5899999886543 344567779999999999997 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh--------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~-------- 247 (771)
++.+...... ......+++..|+|||++.+ ..++.++|+|||||++|+|++|.+||...+..
T Consensus 179 a~~~~~~~~~----~~~~~~~GTp~YmAPEvl~~------~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~ 248 (311)
T 4aw0_A 179 AKVLSPESKQ----ARANSFVGTAQYVSPELLTE------KSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIK 248 (311)
T ss_dssp CEECCTTTTC----CCBCCCCSCGGGCCHHHHHH------SCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred ceecCCCCCc----ccccCcccCcccCCHHHHcC------CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHc
Confidence 9877542211 11223455669999999986 46788999999999999999999999654321
Q ss_pred ----ccCCCCcchHHHHHHHhccCCCCCCChHHH------hhCCCCCcc
Q 004157 248 ----NTASIPKSLLPDYQRLLSSMPSRRLNSSKL------IENSEYFQN 286 (771)
Q Consensus 248 ----~~~~IP~~l~~~i~~lL~~~P~~Rps~~~l------L~~~~fF~n 286 (771)
....+++.+.+++.+||..||.+|+++.++ ++| +||++
T Consensus 249 ~~~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~H-p~F~~ 296 (311)
T 4aw0_A 249 LEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAH-PFFES 296 (311)
T ss_dssp TCCCCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTS-GGGTT
T ss_pred CCCCCCcccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCC-CCcCC
Confidence 114567788999999999999999999885 444 66655
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-43 Score=393.97 Aligned_cols=239 Identities=18% Similarity=0.204 Sum_probs=202.0
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
+...|++.++||.|+ | +||+|+++.+|+.||||+++...... .+.+.+|+++|+.|+|||||+++++|+++
T Consensus 149 p~~~y~~~~~iG~G~fG--~V~~a~~~~tg~~vAiK~i~~~~~~~--~~~~~~Ei~il~~l~HpnIV~l~~~~~~~---- 220 (423)
T 4fie_A 149 PRSYLDNFIKIGEGSTG--IVCIATVRSSGKLVAVKKMDLRKQQR--RELLFNEVVIMRDYQHENVVEMYNSYLVG---- 220 (423)
T ss_dssp GGGTEEEEEEEEECSSC--EEEEEEETTTCCEEEEEEEESTTCSS--GGGHHHHHHHHHHCCCTTBCCEEEEEEET----
T ss_pred hhHhcEeeeEeccCcCc--EEEEEEECCCCCEEEEEEEeccchhH--HHHHHHHHHHHHhCCCCCCCceEEEEEEC----
Confidence 345699999999999 9 99999999999999999998754332 45688999999999999999999999974
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+||||||| ++|.++++...+ .+..++.++.||+.||.|||+ .+||||||||+|||++.+|.+||+||
T Consensus 221 ----~~~~iVmEy~~gG~L~~~i~~~~l----~e~~~~~~~~qil~aL~ylH~-~~IiHRDiKp~NILl~~~g~vKl~DF 291 (423)
T 4fie_A 221 ----DELWVVMEFLEGGALTDIVTHTRM----NEEQIAAVCLAVLQALSVLHA-QGVIHRDIKSDSILLTHDGRVKLSDF 291 (423)
T ss_dssp ----TEEEEEEECCTTEEHHHHHHHSCC----CHHHHHHHHHHHHHHHHHHHH-TTEECCCCSTTTEEECTTCCEEECCC
T ss_pred ----CEEEEEEeCCCCCcHHHHHhccCC----CHHHHHHHHHHHHHHHHHHHH-CCeecccCCHHHEEEcCCCCEEEecC
Confidence 4899999999 579999987653 345567779999999999997 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------- 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l------- 246 (771)
|++..+..... .....+++..|||||++.+ ..|+.++|||||||++|||++|.+||.....
T Consensus 292 Gla~~~~~~~~------~~~~~~GTp~YmAPEvl~~------~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i 359 (423)
T 4fie_A 292 GFCAQVSKEVP------RRKSLVGTPYWMAPELISR------LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI 359 (423)
T ss_dssp TTCEECCSSCC------CBCCCEECTTTCCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH
T ss_pred ccceECCCCCc------cccccccCcCcCCHHHHCC------CCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH
Confidence 99987754321 1223456679999999876 4688999999999999999999999865321
Q ss_pred --------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 247 --------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 247 --------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
.....++..+.+++.+||..||.+|+++.++|+| +||.
T Consensus 360 ~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H-p~~~ 405 (423)
T 4fie_A 360 RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH-PFLA 405 (423)
T ss_dssp HHSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC-GGGG
T ss_pred HcCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC-HHhc
Confidence 1224577889999999999999999999999999 5664
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-43 Score=374.71 Aligned_cols=243 Identities=16% Similarity=0.195 Sum_probs=197.7
Q ss_pred CCCc-eecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 18 DLPY-NIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 18 ~~~Y-~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
+.+| ++.++||.|+ | +||+|+++.++..||||++..........+.+++|+++|++|+||||+++++++++...+
T Consensus 24 ~gr~~~~~~~iG~G~fg--~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~- 100 (290)
T 3fpq_A 24 DGRFLKFDIEIGRGSFK--TVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKG- 100 (290)
T ss_dssp TSSEEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETT-
T ss_pred CCceEEeeeEEecCcCc--EEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCC-
Confidence 3455 7888999998 8 999999999999999999987655556677899999999999999999999999864322
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCC--ceecCCCCCCEEEc-CCCcEEE
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCK--LVHGNVCLSSVVVT-QTLDWKL 170 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~--ivH~dIkp~NI~v~-~~G~~KL 170 (771)
...+||||||| ++|.++|++.... ....+..++.||+.||.|||+ .+ ||||||||+|||++ .+|.+||
T Consensus 101 ---~~~~~lvmEy~~gg~L~~~l~~~~~l---~~~~~~~~~~qi~~aL~ylH~-~~~~IiHRDlKp~NILl~~~~g~vKl 173 (290)
T 3fpq_A 101 ---KKCIVLVTELMTSGTLKTYLKRFKVM---KIKVLRSWCRQILKGLQFLHT-RTPPIIHRDLKCDNIFITGPTGSVKI 173 (290)
T ss_dssp ---EEEEEEEEECCCSCBHHHHHHHHSSC---CHHHHHHHHHHHHHHHHHHHT-SSSCCCCCCCCGGGEEESSTTSCEEE
T ss_pred ---CcEEEEEEeCCCCCCHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHH-CCCCEEecccChhheeEECCCCCEEE
Confidence 35799999999 5899999886543 334456669999999999996 66 99999999999998 4899999
Q ss_pred EccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----h
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----L 246 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----l 246 (771)
+|||+++..... .....+++..|+|||++.+ .++.++|||||||++|||++|.+||.... +
T Consensus 174 ~DFGla~~~~~~--------~~~~~~GTp~YmAPE~~~~-------~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~ 238 (290)
T 3fpq_A 174 GDLGLATLKRAS--------FAKAVIGTPEFMAPEMYEE-------KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQI 238 (290)
T ss_dssp CCTTGGGGCCTT--------SBEESCSSCCCCCGGGGGT-------CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHH
T ss_pred EeCcCCEeCCCC--------ccCCcccCccccCHHHcCC-------CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHH
Confidence 999999754331 1223456679999999864 47789999999999999999999985321 1
Q ss_pred -h----------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 247 -R----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 247 -~----------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
. ....+++.+.+++.+||..||.+|||+.++|+| +||+.
T Consensus 239 ~~~i~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H-p~~~~ 288 (290)
T 3fpq_A 239 YRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH-AFFQE 288 (290)
T ss_dssp HHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS-GGGC-
T ss_pred HHHHHcCCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC-ccccC
Confidence 0 012355678999999999999999999999999 56653
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-43 Score=377.26 Aligned_cols=241 Identities=15% Similarity=0.222 Sum_probs=191.1
Q ss_pred CCceecCCCCCCC-CceEEEEeEEC---CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSK---DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k---~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
..|++.+.||+|+ | +||+|++. .+++.||||++.+..........+++|+++|++|+||||++++++++++
T Consensus 24 ~~Y~i~~~lG~G~fg--~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~--- 98 (304)
T 3ubd_A 24 SQFELLKVLGQGSFG--KVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTE--- 98 (304)
T ss_dssp GGEEEEEEEECGGGC--EEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEET---
T ss_pred cccEEEEEEecCCCe--EEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC---
Confidence 3599999999999 9 99999884 4578999999986543333334578899999999999999999999974
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
..+||||||| ++|.++|++.... ....+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+|
T Consensus 99 -----~~~~ivmEy~~gg~L~~~l~~~~~l---~e~~~~~~~~qi~~aL~ylH~-~~IiHRDlKp~NILl~~~g~vKl~D 169 (304)
T 3ubd_A 99 -----GKLYLILDFLRGGDLFTRLSKEVMF---TEEDVKFYLAELALALDHLHS-LGIIYRDLKPENILLDEEGHIKLTD 169 (304)
T ss_dssp -----TEEEEEECCCTTCEEHHHHHHHCCC---CHHHHHHHHHHHHHHHHHHHH-TTCCCSSCCGGGEEECTTSCEEEES
T ss_pred -----CEEEEEEEcCCCCCHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHH-CCCcCCCCCHHHeEEcCCCCEEecc
Confidence 4899999999 5899999886542 344566779999999999997 8999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-----
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----- 247 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~----- 247 (771)
||+++....... .....+++..|+|||++.+ ..++.++|+|||||++|||++|.+||...+..
T Consensus 170 FGla~~~~~~~~------~~~~~~GT~~YmAPE~~~~------~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~ 237 (304)
T 3ubd_A 170 FGLSKESIDHEK------KAYSFCGTVEYMAPEVVNR------RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM 237 (304)
T ss_dssp SEEEEC-----C------CCCSCCCCGGGCCHHHHHT------SCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred cccceeccCCCc------cccccccCcccCCHHHhcc------CCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHH
Confidence 999986543211 1223345669999999876 46788999999999999999999999654321
Q ss_pred -------ccCCCCcchHHHHHHHhccCCCCCCC-----hHHHhhCCCCCcc
Q 004157 248 -------NTASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENSEYFQN 286 (771)
Q Consensus 248 -------~~~~IP~~l~~~i~~lL~~~P~~Rps-----~~~lL~~~~fF~n 286 (771)
....+++.+.+++.+||..||.+||+ ++++++| +||++
T Consensus 238 i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H-p~f~~ 287 (304)
T 3ubd_A 238 ILKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH-SFFST 287 (304)
T ss_dssp HHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS-GGGTT
T ss_pred HHcCCCCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcC-ccccC
Confidence 12456778999999999999999998 4789988 67765
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-42 Score=380.63 Aligned_cols=251 Identities=17% Similarity=0.238 Sum_probs=200.7
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.+|++++.||.|+ | +||+|+++.+|+.||||++.+........+.+.+|+++|+.|+||||++++++++....- .
T Consensus 54 ~~Y~~~~~lG~G~fG--~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~--~ 129 (398)
T 4b99_A 54 DEYEIIETIGNGAYG--VVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPY--G 129 (398)
T ss_dssp SSEEEEEEEEECSSC--EEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCT--T
T ss_pred CCeEEEEEEecccCe--EEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeeccccc--c
Confidence 3699999999999 9 999999999999999999987655556677888999999999999999999998753210 0
Q ss_pred cccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
...++||||||| ++|.++|..... .....++.+++||+.||.|||+ +|||||||||+||+++.+|.+||+|||++
T Consensus 130 ~~~~~~ivmE~~~g~L~~~i~~~~~---l~~~~~~~~~~qil~al~ylH~-~~iiHRDlKP~NIl~~~~~~~Ki~DFGla 205 (398)
T 4b99_A 130 EFKSVYVVLDLMESDLHQIIHSSQP---LTLEHVRYFLYQLLRGLKYMHS-AQVIHRDLKPSNLLVNENCELKIGDFGMA 205 (398)
T ss_dssp TCCCEEEEEECCSEEHHHHHTSSSC---CCHHHHHHHHHHHHHHHHHHHH-TTCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred cCCEEEEEEeCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CcCcCCCcCccccccCCCCCEEEeeccee
Confidence 135899999999 679998876543 3345577789999999999997 99999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----hc----
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN---- 248 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~~---- 248 (771)
+.+....... .......+++..|+|||++.+. ..++.++|||||||++|||++|.+||...+. ..
T Consensus 206 ~~~~~~~~~~--~~~~~~~~GT~~Y~APEv~~~~-----~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~ 278 (398)
T 4b99_A 206 RGLCTSPAEH--QYFMTEYVATRWYRAPELMLSL-----HEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMV 278 (398)
T ss_dssp BCC---------CCCCCSSCCCCTTCCHHHHTTC-----SCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHH
T ss_pred eecccCcccc--ccccccceeChHhcCHHHhcCC-----CCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHh
Confidence 8765432111 1112234566799999998763 3567899999999999999999999854321 00
Q ss_pred -----------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 249 -----------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 249 -----------------------------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
...++..+.+++.+||..||.+|+|+.++|+| +||+
T Consensus 279 ~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H-p~f~ 349 (398)
T 4b99_A 279 LGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH-PFLA 349 (398)
T ss_dssp HCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS-GGGT
T ss_pred cCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC-HhhC
Confidence 02346678899999999999999999999999 5554
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-41 Score=365.32 Aligned_cols=253 Identities=21% Similarity=0.243 Sum_probs=187.8
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc---
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA--- 95 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~--- 95 (771)
.|++.+.||.|+ | +||+|+++.+|+.||||++.... .+...+.+.+|+++|++|+||||+++++++++.+...
T Consensus 6 dy~~~~~lG~G~fg--~V~~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~ 82 (299)
T 4g31_A 6 DFEPIQCLGRGGFG--VVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQ 82 (299)
T ss_dssp HEEEEEEEEECC----EEEEEEETTTCCEEEEEEEEECS-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC------
T ss_pred hCEEeeEEecCCCe--EEEEEEECCCCCEEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccc
Confidence 489999999999 9 99999999999999999998654 3344567889999999999999999999997643210
Q ss_pred -CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 96 -TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 96 -~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
.....++||||||| ++|.++++............+..++.||+.||.|||+ .+|+||||||+|||++.+|.+||+|
T Consensus 83 ~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~-~~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 83 PSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHS-KGLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp ----CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEECTTCCEEECC
T ss_pred ccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHH-CcCccccCcHHHeEECCCCcEEEcc
Confidence 00133689999999 5899999876544444444466679999999999997 8999999999999999999999999
Q ss_pred cCcccccCCCCCCCCC------CccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-
Q 004157 173 FDVLSEFDGNNEAANG------PMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE- 245 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~------~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~- 245 (771)
||+++........... .......+++..|+|||++.+ ..++.++|||||||++|||++ ||....
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~------~~y~~~~DiwSlGvilyell~---Pf~~~~~ 232 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHG------NSYSHKVDIFSLGLILFELLY---PFSTQME 232 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTT------CCCCTHHHHHHHHHHHHHHHS---CCSSHHH
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcC------CCCCCHHHHHHHHHHHHHHcc---CCCCccH
Confidence 9999877653221110 011223456679999999886 468899999999999999996 443221
Q ss_pred -h---hc--cCCCC-------cchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 246 -L---RN--TASIP-------KSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 246 -l---~~--~~~IP-------~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
. .. ...+| +.+.+++++||+.||.+||++.++++| +||++
T Consensus 233 ~~~~~~~~~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h-~~~~~ 285 (299)
T 4g31_A 233 RVRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN-AVFED 285 (299)
T ss_dssp HHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS-GGGCC
T ss_pred HHHHHHHHhcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC-HhhCC
Confidence 1 11 12233 345678999999999999999999998 56654
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-42 Score=370.34 Aligned_cols=232 Identities=14% Similarity=0.128 Sum_probs=187.9
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|++.++||.|+ | +||+|+++.+|+.||||++++... ..+|+++|+.|+||||++++++++++
T Consensus 59 ~~~~~~~lG~G~fG--~Vy~a~~~~~g~~vAiK~i~~~~~-------~~~E~~il~~l~HpnIV~l~~~~~~~------- 122 (336)
T 4g3f_A 59 WMTHQPRVGRGSFG--EVHRMKDKQTGFQCAVKKVRLEVF-------RVEELVACAGLSSPRIVPLYGAVREG------- 122 (336)
T ss_dssp EEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEETTTC-------CTHHHHTTTTCCCTTBCCEEEEEEET-------
T ss_pred heEeCcEeccCCCe--EEEEEEECCCCCEEEEEEECHHHh-------HHHHHHHHHhCCCCCCCcEEEEEEEC-------
Confidence 377888999998 8 999999999999999999986432 24699999999999999999999874
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC-cEEEEccCc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL-DWKLHAFDV 175 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G-~~KL~dFgl 175 (771)
..+||||||| ++|.++|++.+.. ....+..++.||+.||.|||+ .+||||||||+|||++.+| .+||+|||+
T Consensus 123 -~~~~ivmEy~~gg~L~~~l~~~~~l---~e~~~~~~~~qi~~aL~ylH~-~~IiHRDlKp~NILl~~~g~~vKl~DFGl 197 (336)
T 4g3f_A 123 -PWVNIFMELLEGGSLGQLIKQMGCL---PEDRALYYLGQALEGLEYLHT-RRILHGDVKADNVLLSSDGSRAALCDFGH 197 (336)
T ss_dssp -TEEEEEECCCTTCBHHHHHHHHSSC---CHHHHHHHHHHHHHHHHHHHT-TTEECSCCCGGGEEECTTSCCEEECCCTT
T ss_pred -CEEEEEEeccCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCceecccCHHHEEEeCCCCEEEEeeCCC
Confidence 4899999999 5899999887542 344566779999999999996 8999999999999999998 599999999
Q ss_pred ccccCCCCCCCCCCccccc-cccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-------
Q 004157 176 LSEFDGNNEAANGPMLQYA-WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~-~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------- 247 (771)
++.+....... ...... .+++..|+|||++.+ ..++.++|||||||++|||++|.+||......
T Consensus 198 a~~~~~~~~~~--~~~~~~~~~GT~~YmAPE~~~~------~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~ 269 (336)
T 4g3f_A 198 ALCLQPDGLGK--SLLTGDYIPGTETHMAPEVVMG------KPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIA 269 (336)
T ss_dssp CEEC--------------CCCCCCGGGCCHHHHTT------CCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHH
T ss_pred CeEccCCCccc--ceecCCccccCccccCHHHHCC------CCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHH
Confidence 98775432111 111112 234569999999987 46788999999999999999999998643211
Q ss_pred --------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 --------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 --------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
....+|+.+.+++.+||..||.+|||+.+++++
T Consensus 270 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~ 310 (336)
T 4g3f_A 270 SEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRK 310 (336)
T ss_dssp HSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred cCCCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence 124567789999999999999999999998765
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-40 Score=356.47 Aligned_cols=240 Identities=15% Similarity=0.156 Sum_probs=186.8
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
....|+++++||.|+ | +||+|+.+ ..||||++..........+.+++|+++|++|+||||+++++++..
T Consensus 34 ~~~~l~l~~~iG~G~fG--~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~----- 103 (307)
T 3omv_A 34 EASEVMLSTRIGSGSFG--TVYKGKWH---GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK----- 103 (307)
T ss_dssp CTTSCCEEEECCCCSSS--EEEEEESS---SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-----
T ss_pred cHHHeEEeeEEeeCCCc--EEEEEEEC---CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-----
Confidence 344678899999999 9 99999865 359999997655555667889999999999999999999998753
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+||||||| ++|.++|...... .....+..++.||+.||.|||+ .+||||||||+|||++++|.+||+||
T Consensus 104 ----~~~~iVmEy~~gGsL~~~l~~~~~~--l~~~~~~~i~~qia~gL~yLH~-~~IiHRDlKp~NILl~~~~~~Ki~DF 176 (307)
T 3omv_A 104 ----DNLAIVTQWCEGSSLYKHLHVQETK--FQMFQLIDIARQTAQGMDYLHA-KNIIHRDMKSNNIFLHEGLTVKIGDF 176 (307)
T ss_dssp ----SSCEEEEECCSSCBHHHHHHTSCCC--CCHHHHHHHHHHHHHHHHHHHH-TTCBCSCCCSSSEEEETTEEEEECCC
T ss_pred ----CeEEEEEEcCCCCCHHHHHhhcCCC--CCHHHHHHHHHHHHHHHHHHHH-CCccCCccCHHHEEECCCCcEEEeec
Confidence 2579999999 6899999764321 2333455669999999999997 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----h---
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----L--- 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----l--- 246 (771)
|+++........ .......++..|+|||++.+.. ...++.++|||||||++|||++|..||.... +
T Consensus 177 Gla~~~~~~~~~----~~~~~~~GT~~ymAPE~l~~~~---~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~ 249 (307)
T 3omv_A 177 GLATVKSRWSGS----QQVEQPTGSVLWMAPEVIRMQD---NNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFM 249 (307)
T ss_dssp SSCBC----------------CCCCTTSCCHHHHHCCS---SCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHH
T ss_pred cCceecccCCcc----eeecccccCCCccCHHHhhccC---CCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHH
Confidence 999865432111 0112234566999999986421 0246789999999999999999999985421 1
Q ss_pred -h----------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 -R----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 -~----------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
. ....+|..+.+++.+||+.+|.+||++.+++++
T Consensus 250 ~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~ 294 (307)
T 3omv_A 250 VGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSS 294 (307)
T ss_dssp HHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHH
T ss_pred HhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 0 113467789999999999999999999998765
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-40 Score=354.74 Aligned_cols=241 Identities=15% Similarity=0.180 Sum_probs=189.9
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEEC-----CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEE
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSK-----DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTE 89 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k-----~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e 89 (771)
++..+|.++++||+|+ | +||+|+++ .++..||||++... .+...+.+.+|+++|++|+||||+++++++.
T Consensus 10 I~r~~~~l~~~lG~G~fG--~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~ 85 (299)
T 4asz_A 10 IKRHNIVLKRELGEGAFG--KVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCV 85 (299)
T ss_dssp CCGGGEEEEEEEEC--CC--CEEEEEECSCC----CEEEEEEEECSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC
T ss_pred cCHHHeEEeeEEeeCCCc--EEEEEEECCcccCCCCEEEEEEEeCCC--ChHHHHHHHHHHHHHHhCCCCCCccEEEEEe
Confidence 3455799999999999 9 99999875 35788999999753 3345677899999999999999999999998
Q ss_pred ecccCcCCcccEEEEEecCC--cchHHHHHHhCC----------CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCC
Q 004157 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGL----------EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCL 157 (771)
Q Consensus 90 ~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~----------~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp 157 (771)
++ ..+||||||| ++|.++|+.... ........+..++.||+.||.|||+ .+||||||||
T Consensus 86 ~~--------~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~-~~iiHRDlKp 156 (299)
T 4asz_A 86 EG--------DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS-QHFVHRDLAT 156 (299)
T ss_dssp SS--------SSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSG
T ss_pred eC--------CEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCccCH
Confidence 63 3799999999 689999986431 1122344456679999999999997 8999999999
Q ss_pred CCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-
Q 004157 158 SSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS- 236 (771)
Q Consensus 158 ~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~- 236 (771)
+||+++.++.+||+|||+++........ .......++..|+|||++.+ ..++.++|||||||++|||++
T Consensus 157 ~NILl~~~~~~Ki~DFGla~~~~~~~~~----~~~~~~~gt~~ymAPE~~~~------~~~~~k~DVwS~Gvvl~Ellt~ 226 (299)
T 4asz_A 157 RNCLVGENLLVKIGDFGMSRDVYSTDYY----RVGGHTMLPIRWMPPESIMY------RKFTTESDVWSLGVVLWEIFTY 226 (299)
T ss_dssp GGEEECGGGCEEECCCSCHHHHTGGGCE----EETTTEEECGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHTT
T ss_pred hhEEECCCCcEEECCcccceecCCCCce----eecCceecChhhcCHHHHcC------CCCCchhhHHHHHHHHHHHHcC
Confidence 9999999999999999999866442110 00111234558999999986 468889999999999999998
Q ss_pred CCCCCChhhh-------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 237 GMRLSKTEEL-------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 237 g~~p~~~~~l-------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
|..||..... .....+|..+.+++.+||+.+|++||++.++++
T Consensus 227 G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~ 282 (299)
T 4asz_A 227 GKQPWYQLSNNEVIECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHT 282 (299)
T ss_dssp TCCTTTTSCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 8888854221 112457788999999999999999999998753
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=354.06 Aligned_cols=239 Identities=14% Similarity=0.180 Sum_probs=184.0
Q ss_pred CCceecCCCCCCC-CceEEEEeEEC-----CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecc
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSK-----DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k-----~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~ 92 (771)
..|.+.++||+|+ | +||+|+.+ .++..||||++... .+...+.+.+|+++|++|+||||+++++++.+.
T Consensus 41 ~d~~l~~~LG~G~fG--~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~- 115 (329)
T 4aoj_A 41 RDIVLKWELGEGAFG--KVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTMLQHQHIVRFFGVCTEG- 115 (329)
T ss_dssp GGEEEEEEEEECSSE--EEEEEEESSSCC---CEEEEEEEESCC--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS-
T ss_pred HHeEEEEEEccCCCc--EEEEEEECCcccCCCCeEEEEEEECcC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC-
Confidence 3578889999998 8 99999865 36789999999753 344567899999999999999999999999863
Q ss_pred cCcCCcccEEEEEecCC--cchHHHHHHhCCC------------CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCC
Q 004157 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLE------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLS 158 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~ 158 (771)
..+||||||| ++|.++|+..... .......+..++.||+.||.|||+ .+||||||||+
T Consensus 116 -------~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~-~~iiHRDLKp~ 187 (329)
T 4aoj_A 116 -------RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG-LHFVHRDLATR 187 (329)
T ss_dssp -------SSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGG
T ss_pred -------CEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc-CCeecccccHh
Confidence 3799999999 6899999875321 112334456679999999999997 89999999999
Q ss_pred CEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-C
Q 004157 159 SVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-G 237 (771)
Q Consensus 159 NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g 237 (771)
|||++.++.+||+|||+++......... ......++..|+|||++.+ ..++.++|||||||++|||++ |
T Consensus 188 NILl~~~~~~Ki~DFGla~~~~~~~~~~----~~~~~~gt~~ymAPE~~~~------~~~~~~sDvwS~Gvvl~Ellt~G 257 (329)
T 4aoj_A 188 NCLVGQGLVVKIGDFGMSRDIYSTDYYR----VGGRTMLPIRWMPPESILY------RKFTTESDVWSFGVVLWEIFTYG 257 (329)
T ss_dssp GEEEETTTEEEECCCC--------------------CCCCGGGCCHHHHTT------CCCCHHHHHHHHHHHHHHHHTTS
T ss_pred hEEECCCCcEEEcccccceeccCCCcce----ecCcccccccccChhhhcC------CCCCccccccchHHHHHHHHcCC
Confidence 9999999999999999998764422110 0112234558999999886 467889999999999999998 8
Q ss_pred CCCCChhhh-------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 238 MRLSKTEEL-------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 238 ~~p~~~~~l-------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
..||..... .....+|+.+.+++.+||+.+|++||++.+++++
T Consensus 258 ~~Pf~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~ 313 (329)
T 4aoj_A 258 KQPWYQLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHAR 313 (329)
T ss_dssp CCTTCSSCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHcCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence 888753211 1124578889999999999999999999998764
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-40 Score=351.76 Aligned_cols=240 Identities=15% Similarity=0.195 Sum_probs=188.5
Q ss_pred CCceecCCCCCCC-CceEEEEeEEC-----CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecc
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSK-----DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k-----~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~ 92 (771)
..+++.++||+|+ | +||+|+.+ .+++.||||++.... .....+.+++|+.++++|+||||+++++++..+
T Consensus 26 ~~~~~~~~lG~G~fG--~Vykg~~~~~~~~~~~~~VAvK~l~~~~-~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~- 101 (308)
T 4gt4_A 26 SAVRFMEELGEDRFG--KVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQHPNVVCLLGVVTKD- 101 (308)
T ss_dssp GGEEEEEEEEECSSC--EEEEEEEC-------CEEEEEEECCC-C-CC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSS-
T ss_pred HHCeEeeEeccCCCc--EEEEEEEcCCccCCCCeEEEEEEECccc-ChHHHHHHHHHHHHHHhCCCCCCCCcceEEEEC-
Confidence 4578889999999 9 99999864 457899999997543 223456789999999999999999999999763
Q ss_pred cCcCCcccEEEEEecCC--cchHHHHHHhCCC-------------CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCC
Q 004157 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLE-------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCL 157 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~-------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp 157 (771)
..+||||||| ++|.++|...... .......+..++.||+.||.|||+ .++|||||||
T Consensus 102 -------~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~-~~iiHRDLK~ 173 (308)
T 4gt4_A 102 -------QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS-HHVVHKDLAT 173 (308)
T ss_dssp -------SSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSG
T ss_pred -------CEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh-CCCCCCCccc
Confidence 3689999999 6899999764321 112233455669999999999997 8999999999
Q ss_pred CCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-
Q 004157 158 SSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS- 236 (771)
Q Consensus 158 ~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~- 236 (771)
+||||+.++.+||+|||+++.....+.. .......++..|+|||++.+ ..++.++|||||||++|||++
T Consensus 174 ~NILl~~~~~~Ki~DFGlar~~~~~~~~----~~~~~~~gt~~ymAPE~l~~------~~~s~ksDVwSfGvvl~El~t~ 243 (308)
T 4gt4_A 174 RNVLVYDKLNVKISDLGLFREVYAADYY----KLLGNSLLPIRWMAPEAIMY------GKFSIDSDIWSYGVVLWEVFSY 243 (308)
T ss_dssp GGEEECGGGCEEECCSCCBCGGGGGGCB----CSSSSSCBCGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHTT
T ss_pred cceEECCCCCEEECCcccceeccCCCce----eEecccccCCcccCHHHHhC------CCCCccchhhhHHHHHHHHHhC
Confidence 9999999999999999999866432110 01112244558999999876 468899999999999999998
Q ss_pred CCCCCChhhh-------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 237 GMRLSKTEEL-------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 237 g~~p~~~~~l-------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
|..||..... .....+|..+.+++.+|++.+|.+||++.+++++
T Consensus 244 g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~ 300 (308)
T 4gt4_A 244 GLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSR 300 (308)
T ss_dssp TCCTTTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 7888754221 1124567789999999999999999999998765
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-39 Score=354.28 Aligned_cols=241 Identities=13% Similarity=0.153 Sum_probs=188.8
Q ss_pred CCceecCCCCCCC-CceEEEEeEEC---CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEeccc
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSK---DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENI 93 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k---~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~ 93 (771)
..|+++++||+|+ | +||+|+++ .+++.||||++..... ...+.+|+++|+.+ .||||+++++++++.
T Consensus 21 ~~Y~i~~~lG~G~fg--~Vy~a~~~~~~~~~~~vAiK~i~~~~~----~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~-- 92 (361)
T 4f9c_A 21 NVFKIEDKIGEGTFS--SVYLATAQLQVGPEEKIALKHLIPTSH----PIRIAAELQCLTVAGGQDNVMGVKYCFRKN-- 92 (361)
T ss_dssp GTCEEEEEEEECSSE--EEEEEEEEBTTSCEEEEEEEEECTTSC----HHHHHHHHHHHHHTCSBTTBCCCSEEEEET--
T ss_pred CcEEEEEEEecccCc--EEEEEEEcccCCCCCEEEEEEEccccC----HHHHHHHHHHHHHhcCCCCCceEEEEEEEC--
Confidence 4699999999999 8 99999875 3578999999875422 34577899999998 599999999999874
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCC-CcEEE
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT-LDWKL 170 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~-G~~KL 170 (771)
+++||||||| ++|.++++. .....++.+++||+.||+|||+ .||+||||||+||+++.+ |.+||
T Consensus 93 ------~~~~lvmE~~~g~~L~~~~~~------l~~~~~~~~~~qll~al~ylH~-~gIiHRDiKPeNiLl~~~~~~~kl 159 (361)
T 4f9c_A 93 ------DHVVIAMPYLEHESFLDILNS------LSFQEVREYMLNLFKALKRIHQ-FGIVHRDVKPSNFLYNRRLKKYAL 159 (361)
T ss_dssp ------TEEEEEEECCCCCCHHHHHTT------CCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEEETTTTEEEE
T ss_pred ------CEEEEEEeCCCcccHHHHHcC------CCHHHHHHHHHHHHHHHHHHHH-CCeEeCcCCHHHeEEeCCCCeEEE
Confidence 4899999999 579988853 2344577789999999999997 999999999999999876 89999
Q ss_pred EccCcccccCCCCCCCC----------------------CCccccccccCCCCCChhccccccccccCCCCCcchHHHHH
Q 004157 171 HAFDVLSEFDGNNEAAN----------------------GPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLG 228 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~----------------------~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG 228 (771)
+|||+++.......... ........+++..|+|||++.+. ..++.++||||+|
T Consensus 160 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-----~~y~~~~DiWSlG 234 (361)
T 4f9c_A 160 VDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKC-----PNQTTAIDMWSAG 234 (361)
T ss_dssp CCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTC-----SCCCTHHHHHHHH
T ss_pred CcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCC-----CCCCCccchhhhH
Confidence 99999986654221000 00001123455689999998763 4578899999999
Q ss_pred HHHHHHhhCCCCCCh-h-h---h---------------------------------------------------------
Q 004157 229 CLIYELFSGMRLSKT-E-E---L--------------------------------------------------------- 246 (771)
Q Consensus 229 ~li~el~~g~~p~~~-~-~---l--------------------------------------------------------- 246 (771)
|++|||++|..||.. . + +
T Consensus 235 ~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~ 314 (361)
T 4f9c_A 235 VIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQG 314 (361)
T ss_dssp HHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC---------------
T ss_pred HHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhcccccccccccccccc
Confidence 999999999987721 1 0 0
Q ss_pred -----hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 247 -----RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 247 -----~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
.....+++...+++++||..||++|+|++++|+| +||++
T Consensus 315 ~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~H-p~f~~ 358 (361)
T 4f9c_A 315 HATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLH-PFFKD 358 (361)
T ss_dssp -------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTS-GGGTT
T ss_pred ccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC-cccCC
Confidence 0012467778899999999999999999999999 67765
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-38 Score=371.58 Aligned_cols=241 Identities=13% Similarity=0.180 Sum_probs=197.7
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC----chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA----QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~----~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
..|++++.||.|+ | +||+|+++.+|+.||||++++... ........++++.+++.++||||++++++|+++
T Consensus 189 ddf~i~k~LG~G~fG--~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~-- 264 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFG--EVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTP-- 264 (689)
T ss_dssp GGEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECS--
T ss_pred HHeEEEEEEecccCe--EEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEEC--
Confidence 4699999999999 9 999999999999999999986321 112233344557788889999999999999974
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEE
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~ 171 (771)
.++||||||| ++|..+|.+.+.. .+..++.++.||+.||.|||+ .+||||||||+||+++.+|.+||+
T Consensus 265 ------~~lylVmEy~~GGdL~~~l~~~~~l---~E~~a~~y~~qIl~aL~yLH~-~gIiHRDLKPeNILld~~G~vKL~ 334 (689)
T 3v5w_A 265 ------DKLSFILDLMNGGDLHYHLSQHGVF---SEADMRFYAAEIILGLEHMHN-RFVVYRDLKPANILLDEHGHVRIS 334 (689)
T ss_dssp ------SEEEEEECCCCSCBHHHHHHHHCCC---CHHHHHHHHHHHHHHHHHHHT-TTEECCCCSGGGEEECTTSCEEEC
T ss_pred ------CEEEEEEecCCCCcHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHH-CCccccCCchHHeEEeCCCCEEec
Confidence 4899999999 6899999887543 344567779999999999996 999999999999999999999999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh----
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---- 247 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~---- 247 (771)
|||++....... ....+++..|+|||++..+ ..|+.++|+|||||++|||++|.+||......
T Consensus 335 DFGlA~~~~~~~--------~~t~~GTp~YmAPEvl~~~-----~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~ 401 (689)
T 3v5w_A 335 DLGLACDFSKKK--------PHASVGTHGYMAPEVLQKG-----VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE 401 (689)
T ss_dssp CCTTCEECSSCC--------CCSCCSCGGGCCHHHHSTT-----CCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHH
T ss_pred ccceeeecCCCC--------CCCccCCcCccCHHHHhCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence 999998765421 2234566699999998643 46788999999999999999999999653211
Q ss_pred -----------ccCCCCcchHHHHHHHhccCCCCCCC-----hHHHhhCCCCCcch
Q 004157 248 -----------NTASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENSEYFQNK 287 (771)
Q Consensus 248 -----------~~~~IP~~l~~~i~~lL~~~P~~Rps-----~~~lL~~~~fF~n~ 287 (771)
....++..+.+++.+||..||.+|++ ++++++| +||++.
T Consensus 402 i~~~i~~~~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H-pfF~~i 456 (689)
T 3v5w_A 402 IDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES-PFFRSL 456 (689)
T ss_dssp HHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS-GGGTTC
T ss_pred HHHhhcCCCCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC-ccccCC
Confidence 11456778999999999999999998 6899888 777764
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=349.03 Aligned_cols=241 Identities=16% Similarity=0.190 Sum_probs=190.6
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCC-----CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCC-CCeeEEeeeEEec
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDG-----SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRH-PNILAFLHSTEVE 91 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g-----~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrH-PnIlkv~d~~e~e 91 (771)
.+|++++.||.|+ | +||+|+++..+ +.||||++..... ....+.+.+|+++|++|+| |||+++++++..+
T Consensus 64 ~~~~l~~~LG~G~fG--~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~-~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~ 140 (353)
T 4ase_A 64 DRLKLGKPLGRGAFG--QVIEADAFGIDKTATCRTVAVKMLKEGAT-HSEHRALMSELKILIHIGHHLNVVNLLGACTKP 140 (353)
T ss_dssp GGEEEEEEEEECSSE--EEEEEEEETSSSTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred HHeEEeeEEecCCCe--EEEEEEEcCCCcccCCeEEEEEEEccccC-hHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEec
Confidence 4688999999999 9 99999987544 5799999976433 3446678899999999976 8999999998653
Q ss_pred ccCcCCcccEEEEEecCC--cchHHHHHHhCC-------------CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCC
Q 004157 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGL-------------EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVC 156 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~-------------~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIk 156 (771)
...+||||||| ++|.++|+.... ........+..++.||+.||.|||+ .++||||||
T Consensus 141 -------~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~-~~iiHRDLK 212 (353)
T 4ase_A 141 -------GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS-RKCIHRDLA 212 (353)
T ss_dssp -------TSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCS
T ss_pred -------CCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhh-CCeecCccC
Confidence 23689999999 689999986431 1112334456669999999999997 899999999
Q ss_pred CCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh
Q 004157 157 LSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS 236 (771)
Q Consensus 157 p~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~ 236 (771)
|+||+++.+|.+||+|||+++....... ........++..|+|||++.+ ..++.++|||||||++|||++
T Consensus 213 ~~NILl~~~~~vKi~DFGlar~~~~~~~----~~~~~~~~gt~~ymAPE~l~~------~~y~~ksDVwS~Gv~l~El~t 282 (353)
T 4ase_A 213 ARNILLSEKNVVKICDFGLARDIYKDPD----YVRKGDARLPLKWMAPETIFD------RVYTIQSDVWSFGVLLWEIFS 282 (353)
T ss_dssp GGGEEECGGGCEEECCCGGGSCTTTCTT----SEEETTEEECGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHTT
T ss_pred ccceeeCCCCCEEECcchhhhhcccCCC----ceeeccccccccccCHHHHhc------CCCCCcccEeehHHHHHHHHh
Confidence 9999999999999999999987654211 111122334558999999986 478899999999999999998
Q ss_pred -CCCCCChhh----h----------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 237 -GMRLSKTEE----L----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 237 -g~~p~~~~~----l----------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
|..||.... + .....+|+.+.+++.+||+.+|.+|||+.++++|
T Consensus 283 ~G~~Pf~~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~ 341 (353)
T 4ase_A 283 LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 341 (353)
T ss_dssp TSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence 888885421 1 1123467789999999999999999999999876
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-38 Score=367.69 Aligned_cols=237 Identities=18% Similarity=0.274 Sum_probs=197.5
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++++.||.|+ | +||+|+++.+|+.||||++.+.. ....+.+++|+++|+.|+||||++++++|+++
T Consensus 158 ~Y~i~~~lG~G~fg--~V~~~~~~~tg~~~AiK~i~~~~--~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~------- 226 (573)
T 3uto_A 158 HYDIHEELGTGAFG--VVHRVTERATGNNFAAKFVMTPH--ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDD------- 226 (573)
T ss_dssp TEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECS-------
T ss_pred ccEEEEEEeeccCe--EEEEEEECCCCCEEEEEEEeccc--hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEEC-------
Confidence 699999999998 8 99999999999999999998653 23456788999999999999999999999874
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCC--CcEEEEccC
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT--LDWKLHAFD 174 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~--G~~KL~dFg 174 (771)
.++||||||| ++|.++|.... .......++.++.||+.||.|||+ .+|+||||||+||+++.+ |.+||+|||
T Consensus 227 -~~~~iv~E~~~gg~L~~~i~~~~--~~l~e~~~~~~~~qi~~al~ylH~-~~iiHRDlKp~Nill~~~~~~~vKl~DFG 302 (573)
T 3uto_A 227 -NEMVMIYEFMSGGELFEKVADEH--NKMSEDEAVEYMRQVCKGLCHMHE-NNYVHLDLKPENIMFTTKRSNELKLIDFG 302 (573)
T ss_dssp -SEEEEEEECCCCCBHHHHHTCTT--SCEEHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEESSSSCCCEEECCCS
T ss_pred -CEEEEEEeecCCCcHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHH-CCeeeccCChhhccccCCCCCCEEEeecc
Confidence 4899999999 58999886432 123455577789999999999997 899999999999999854 899999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h---
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R--- 247 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~--- 247 (771)
+++.+.... .....+++..|+|||++.+ ..++.++|||||||++|||++|.+||..... .
T Consensus 303 ~a~~~~~~~-------~~~~~~GT~~y~APEv~~~------~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~ 369 (573)
T 3uto_A 303 LTAHLDPKQ-------SVKVTTGTAEFAAPEVAEG------KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVK 369 (573)
T ss_dssp SCEECCTTS-------EEEEECSSGGGCCHHHHTT------CCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHH
T ss_pred ceeEccCCC-------ceeeeEECccccCHHHhCC------CCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHH
Confidence 998875421 1123345569999999987 4678899999999999999999999864321 1
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 ---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 ---------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
....++..+.+++.+||..||.+||++.++|+| +||+
T Consensus 370 ~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H-pw~~ 415 (573)
T 3uto_A 370 SCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH-PWLT 415 (573)
T ss_dssp TTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS-TTTS
T ss_pred hCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC-cCcC
Confidence 113577789999999999999999999999999 5554
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-38 Score=338.22 Aligned_cols=244 Identities=13% Similarity=0.168 Sum_probs=179.5
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|.++++||+|+ | +||+|++ +|+.||||+++... ........|+..+.+|+||||+++++++..++..
T Consensus 4 ~i~L~~~iG~G~fG--~Vy~~~~--~g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~---- 72 (303)
T 3hmm_A 4 TIVLQESIGKGRFG--EVWRGKW--RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGT---- 72 (303)
T ss_dssp GEEEEEEEEECSSS--EEEEEEE--TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSS----
T ss_pred EEEEEEEEeeCCCe--EEEEEEE--CCEEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCC----
Confidence 489999999999 9 9999987 48999999997532 2223345688888899999999999999865422
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcC-------CCceecCCCCCCEEEcCCCcEE
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNND-------CKLVHGNVCLSSVVVTQTLDWK 169 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~-------~~ivH~dIkp~NI~v~~~G~~K 169 (771)
...+||||||| ++|.++|+..... .+....++.|++.||.|||+. .+||||||||+|||++.+|.+|
T Consensus 73 ~~~~~lV~Ey~~~gsL~~~l~~~~l~----~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~K 148 (303)
T 3hmm_A 73 WTQLWLVSDYHEHGSLFDYLNRYTVT----VEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC 148 (303)
T ss_dssp SEEEEEEEECCTTCBHHHHHHHCCBC----HHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEE
T ss_pred ceEEEEEecCCCCCcHHHHHHhCCCC----HHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEE
Confidence 34789999999 6899999876543 333445688999999999963 2899999999999999999999
Q ss_pred EEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh-----
Q 004157 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----- 244 (771)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~----- 244 (771)
|+|||+++......... ........++..|+|||++.+........++.++|||||||++|||++|.+++...
T Consensus 149 i~DFGla~~~~~~~~~~--~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~ 226 (303)
T 3hmm_A 149 IADLGLAVRHDSATDTI--DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQL 226 (303)
T ss_dssp ECCCTTCEEEETTTTEE--SCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCC
T ss_pred EEeCCCCccccCCCCce--eeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccc
Confidence 99999998765432110 01111234556999999987531100012446899999999999999997654211
Q ss_pred -------------hhhc-------cCCCCc---------chHHHHHHHhccCCCCCCChHHHhhC
Q 004157 245 -------------ELRN-------TASIPK---------SLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 245 -------------~l~~-------~~~IP~---------~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.+.. ...+|. .+.+++.+||+.||.+|||+.++++.
T Consensus 227 p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~ 291 (303)
T 3hmm_A 227 PYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT 291 (303)
T ss_dssp TTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred cchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence 0100 023332 46778899999999999999998753
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-37 Score=333.70 Aligned_cols=241 Identities=19% Similarity=0.269 Sum_probs=199.5
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
-.+|++.+.||.|+ | +||+|+++.+|+.|+||++.+........+.+.+|+++|+.++||||++++++++.+
T Consensus 14 ~~~y~~~~~lG~G~~g--~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~----- 86 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFA--KVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETE----- 86 (328)
T ss_dssp ETTEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECS-----
T ss_pred cCCEEEEEEEeeCCCE--EEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC-----
Confidence 34799999999998 8 999999999999999999987655555677888999999999999999999999863
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+|+||||+ ++|.+++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 87 ---~~~~lv~e~~~~~~L~~~l~~~~~l---~~~~~~~~~~qi~~al~~lH~-~~ivHrDlkp~NIll~~~~~~kl~DFG 159 (328)
T 3fe3_A 87 ---KTLYLIMEYASGGEVFDYLVAHGRM---KEKEARSKFRQIVSAVQYCHQ-KRIVHRDLKAENLLLDADMNIKIADFG 159 (328)
T ss_dssp ---SEEEEEECCCTTCBHHHHHHHHCCC---CHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEECTTSCEEECSTT
T ss_pred ---CEEEEEEECCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCEeccCCCHHHEEEcCCCCEEEeecc
Confidence 4899999999 5799999776532 344466679999999999997 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------ 248 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~------ 248 (771)
++........ .....++..|+|||++.+. ...+.++|+|||||++|+|++|..||.......
T Consensus 160 ~a~~~~~~~~-------~~~~~gt~~y~aPE~~~~~-----~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~ 227 (328)
T 3fe3_A 160 FSNEFTVGGK-------LDAFCGAPPYAAPELFQGK-----KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL 227 (328)
T ss_dssp CCGGGSSSCG-------GGTTSSSGGGCCHHHHHTC-----CCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred CceecCCCCc-------cccccCCcceeCcccccCC-----CcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9986654211 1223445689999998763 223468999999999999999999986543211
Q ss_pred ------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 249 ------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 249 ------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
...++..+.+++++||..||.+||++.++++| +||+
T Consensus 228 ~~~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h-~~~~ 269 (328)
T 3fe3_A 228 RGKYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD-RWIN 269 (328)
T ss_dssp HCCCCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC-TTTT
T ss_pred hCCCCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC-Hhhc
Confidence 13456789999999999999999999999999 4554
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-36 Score=322.14 Aligned_cols=242 Identities=18% Similarity=0.259 Sum_probs=195.5
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.||.|+ | +||+|+++.+|+.|+||++............+.+|++++++++||||++++++++.+
T Consensus 3 ~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------- 73 (292)
T 3o0g_A 3 KYEKLEKIGEGTYG--TVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD------- 73 (292)
T ss_dssp SEEEEEEEEECSSS--EEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEET-------
T ss_pred CceeeeEecCCCCe--EEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeC-------
Confidence 699999999998 8 999999999999999999987666556667888999999999999999999999874
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
..+||||||+ ++|...+..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++.
T Consensus 74 -~~~~lv~e~~~~~l~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lH~-~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~ 149 (292)
T 3o0g_A 74 -KKLTLVFEFCDQDLKKYFDSCNG--DLDPEIVKSFLFQLLKGLGFCHS-RNVLHRDLKPQNLLINRNGELKLANFGLAR 149 (292)
T ss_dssp -TEEEEEEECCSEEHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred -CEEEEEEecCCCCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCCCEEEeecccce
Confidence 4899999999 567777765332 13345567779999999999997 899999999999999999999999999998
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCC-CChhhh----h-----
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL-SKTEEL----R----- 247 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p-~~~~~l----~----- 247 (771)
........ .....++..|+|||++.+. ..++.++|+|||||++|+|++|..| +..... .
T Consensus 150 ~~~~~~~~------~~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~ 218 (292)
T 3o0g_A 150 AFGIPVRC------YSAEVVTLWYRPPDVLFGA-----KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRL 218 (292)
T ss_dssp ECCSCCSC------CCSCCSCGGGCCHHHHTTC-----SCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHH
T ss_pred ecCCcccc------ccCCccccCCcChHHHcCC-----CCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHH
Confidence 76532111 1122345589999998763 3467899999999999999987755 322110 0
Q ss_pred --------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 --------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 --------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||+.||.+||++.++++| +||++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h-p~f~~ 288 (292)
T 3o0g_A 219 LGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH-PYFSD 288 (292)
T ss_dssp HCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS-GGGTT
T ss_pred hCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC-ccccc
Confidence 012356678899999999999999999999998 66654
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-36 Score=324.08 Aligned_cols=239 Identities=16% Similarity=0.239 Sum_probs=197.6
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
+..+|++.+.||.|+ | +||+|.++.+|+.|+||++...... ..+.+.+|+.+++.++||||+++++++...
T Consensus 18 ~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~---- 89 (297)
T 3fxz_A 18 PKKKYTRFEKIGQGASG--TVYTAMDVATGQEVAIRQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLVG---- 89 (297)
T ss_dssp GGGTBCCCEEEEEETTE--EEEEEEBTTTCCEEEEEEEEGGGCS--CHHHHHHHHHHHHHCCCTTBCCEEEEEEET----
T ss_pred hhhceeeeeeeccCCCe--EEEEEEECCCCcEEEEEEeeccccc--HHHHHHHHHHHHhcCCCCCCCeEeEEEEEC----
Confidence 556899999999998 8 9999999999999999999864332 245688999999999999999999999874
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+||||||| ++|.+++..... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+||
T Consensus 90 ----~~~~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~qi~~~l~~lH~-~~i~H~Dlkp~Nil~~~~~~~kl~Df 160 (297)
T 3fxz_A 90 ----DELWVVMEYLAGGSLTDVVTETCM----DEGQIAAVCRECLQALEFLHS-NQVIHRDIKSDNILLGMDGSVKLTDF 160 (297)
T ss_dssp ----TEEEEEEECCTTCBHHHHHHHSCC----CHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEECTTCCEEECCC
T ss_pred ----CEEEEEEECCCCCCHHHHHhhcCC----CHHHHHHHHHHHHHHHHHHHh-CCceeCCCCHHHEEECCCCCEEEeeC
Confidence 4899999999 579999987643 344466779999999999997 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------- 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l------- 246 (771)
|++......... .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||.....
T Consensus 161 g~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~ 228 (297)
T 3fxz_A 161 GFCAQITPEQSK------RSTMVGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI 228 (297)
T ss_dssp TTCEECCSTTCC------BCCCCSCGGGCCHHHHHC------SCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH
T ss_pred CCceecCCcccc------cCCccCCcCccChhhhcC------CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 999876542211 122344558999999876 3567899999999999999999998854321
Q ss_pred --------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 247 --------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 247 --------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
.....++..+.+++.+||..+|.+||++.++++| +||+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h-~~~~ 274 (297)
T 3fxz_A 229 ATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH-QFLK 274 (297)
T ss_dssp HHHCSCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC-GGGG
T ss_pred HhCCCCCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhC-hhhc
Confidence 1123567779999999999999999999999998 4553
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-36 Score=340.50 Aligned_cols=253 Identities=15% Similarity=0.203 Sum_probs=188.8
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.+|++++.||.|+ | +||+|+++.+|+.||||++..........+.+.+|+++|+.|+||||+++++++......
T Consensus 53 ~~y~~~~~lG~G~~g--~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~--- 127 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYG--HVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVE--- 127 (458)
T ss_dssp TTEEECCC---------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTT---
T ss_pred CCeEEeeEeeecCCe--EEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcc---
Confidence 4699999999998 8 999999999999999999987655555677889999999999999999999998643211
Q ss_pred cccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
....+|||||++ ++|..+++.... .....++.+++||+.||.|||+ .+|+||||||+||+|+.+|.+||+|||++
T Consensus 128 ~~~~~~lv~e~~~~~L~~~~~~~~~---l~~~~~~~~~~qi~~aL~~LH~-~~iiHrDlKp~NILl~~~~~~kl~DFGla 203 (458)
T 3rp9_A 128 KFDELYVVLEIADSDFKKLFRTPVY---LTELHIKTLLYNLLVGVKYVHS-AGILHRDLKPANCLVNQDCSVKVCDFGLA 203 (458)
T ss_dssp TCCCEEEEECCCSEEHHHHHHSSCC---CCHHHHHHHHHHHHHHHHHHHH-TTCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred cCceEEEEEeccccchhhhcccCCC---CCHHHHHHHHHHHHHHHHHHHh-CCcCCCCCChhhEEECCCCCEeecccccc
Confidence 135799999999 679888876542 2344567779999999999997 89999999999999999999999999999
Q ss_pred cccCCCCCCCCC-C--------------------ccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHh
Q 004157 177 SEFDGNNEAANG-P--------------------MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELF 235 (771)
Q Consensus 177 ~~~~~~~~~~~~-~--------------------~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~ 235 (771)
+........... + ......+++..|+|||++... ..++.++|||||||++|||+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-----~~~~~~~DiwSlG~il~ell 278 (458)
T 3rp9_A 204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQ-----ENYTEAIDVWSIGCIFAELL 278 (458)
T ss_dssp BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTC-----CCCCTHHHHHHHHHHHHHHH
T ss_pred hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCC-----CCCCcHhHHHHHHHHHHHHH
Confidence 876532211000 0 011223445689999986432 46788999999999999999
Q ss_pred h-----------CCCCCChhhh----------------------------------------------------------
Q 004157 236 S-----------GMRLSKTEEL---------------------------------------------------------- 246 (771)
Q Consensus 236 ~-----------g~~p~~~~~l---------------------------------------------------------- 246 (771)
+ |.++|.....
T Consensus 279 tg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~ 358 (458)
T 3rp9_A 279 NMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKRE 358 (458)
T ss_dssp TTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCC
T ss_pred HhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCC
Confidence 8 5566533210
Q ss_pred -----hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 247 -----RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 247 -----~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
.....++..+.+++.+||..||.+||++.++|+| +||++
T Consensus 359 ~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~H-p~f~~ 402 (458)
T 3rp9_A 359 GTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAH-PFFKE 402 (458)
T ss_dssp CCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS-GGGTT
T ss_pred CCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcC-Hhhhh
Confidence 0012346778999999999999999999999999 66654
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-36 Score=326.01 Aligned_cols=246 Identities=16% Similarity=0.261 Sum_probs=186.0
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
..|++.+.||.|+ | +||+|+++.+|+.|+||++...... .....+.+|++++++|+||||++++++++.+
T Consensus 5 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~------ 75 (317)
T 2pmi_A 5 SQFKQLEKLGNGTYA--TVYKGLNKTTGVYVALKEVKLDSEE-GTPSTAIREISLMKELKHENIVRLYDVIHTE------ 75 (317)
T ss_dssp --------------C--EEEEEECSSSCCEEEEEEEECCSTT-CSCHHHHHHHHHHTTCCBTTBCCEEEEECCT------
T ss_pred cceeEeeEECCCCCE--EEEEEEECCCCcEEEEEEeeccccc-ccHHHHHHHHHHHHhcCCCCcceEEEEEEEC------
Confidence 4699999999998 8 9999999999999999999865322 2345678899999999999999999999864
Q ss_pred cccEEEEEecCC-cchHHHHHHhCC---CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELGL---EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~~---~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+||||||+ ++|.+++..... ........+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+||
T Consensus 76 --~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~-~~ivH~Dlkp~NIl~~~~~~~kl~Df 152 (317)
T 2pmi_A 76 --NKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE-NKILHRDLKPQNLLINKRGQLKLGDF 152 (317)
T ss_dssp --TEEEEEEECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEECTTCCEEECCC
T ss_pred --CeEEEEEEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHH-CCeeeCCCChHHeEEcCCCCEEECcC
Confidence 4899999999 689998876532 1223445567779999999999997 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h--
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R-- 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~-- 247 (771)
|++......... .....++..|+|||++.+. ..++.++|+|||||++|+|++|.+||..... .
T Consensus 153 g~~~~~~~~~~~------~~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i 221 (317)
T 2pmi_A 153 GLARAFGIPVNT------FSSEVVTLWYRAPDVLMGS-----RTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLI 221 (317)
T ss_dssp SSCEETTSCCCC------CCCCCSCCTTCCHHHHTTC-----CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred ccceecCCCccc------CCCCcccccccCchHhhCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence 999876532111 1122345689999998653 3567899999999999999999988853210 0
Q ss_pred ----------------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcch
Q 004157 248 ----------------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNK 287 (771)
Q Consensus 248 ----------------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n~ 287 (771)
....++..+.+++.+||..||.+||++.++++| +||++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h-p~f~~~ 300 (317)
T 2pmi_A 222 FDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH-PWFAEY 300 (317)
T ss_dssp HHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS-GGGGGG
T ss_pred HHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC-hhhhcc
Confidence 001456778999999999999999999999998 666554
Q ss_pred h
Q 004157 288 L 288 (771)
Q Consensus 288 l 288 (771)
+
T Consensus 301 ~ 301 (317)
T 2pmi_A 301 Y 301 (317)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-36 Score=334.03 Aligned_cols=248 Identities=17% Similarity=0.283 Sum_probs=191.1
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccCcC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d~~ 96 (771)
.+|++.+.||.|+ | +||+|.++.+|+.||||++............+.+|+.+|+.++ ||||+++++++..++
T Consensus 9 ~~y~~~~~lG~G~~g--~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~---- 82 (388)
T 3oz6_A 9 RKYELVKKLGKGAYG--IVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADN---- 82 (388)
T ss_dssp TTEEEEEC---------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTT----
T ss_pred CceEEEEEeeeCCCe--EEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCC----
Confidence 4799999999998 8 9999999999999999999765555556677889999999998 999999999998654
Q ss_pred CcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 97 ~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
...+||||||| ++|..+++...+ ....+.++++||+.||+|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 83 --~~~~~lv~e~~~~~L~~~~~~~~~----~~~~~~~i~~qi~~~L~~LH~-~~ivHrDlkp~NIll~~~~~~kl~DFG~ 155 (388)
T 3oz6_A 83 --DRDVYLVFDYMETDLHAVIRANIL----EPVHKQYVVYQLIKVIKYLHS-GGLLHRDMKPSNILLNAECHVKVADFGL 155 (388)
T ss_dssp --SSCEEEEEECCSEEHHHHHHHTCC----CHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred --CCEEEEEecccCcCHHHHHHcCCC----CHHHHHHHHHHHHHHHHHHHh-CCEEeCCCCHHHeEEcCCCCEEecCCcc
Confidence 34799999999 679988887532 344466679999999999997 8999999999999999999999999999
Q ss_pred ccccCCCCCCCC---------------CCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCC
Q 004157 176 LSEFDGNNEAAN---------------GPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL 240 (771)
Q Consensus 176 a~~~~~~~~~~~---------------~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p 240 (771)
++.......... .........++..|+|||++.+. ..++.++|+|||||++|||++|.+|
T Consensus 156 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~~DiwSlG~il~ell~g~~p 230 (388)
T 3oz6_A 156 SRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGS-----TKYTKGIDMWSLGCILGEILCGKPI 230 (388)
T ss_dssp CEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTC-----CCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred cccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCC-----CCCCChhhHHHHHHHHHHHHhCCCC
Confidence 986643111000 00011223455589999998753 4577899999999999999999998
Q ss_pred CChhhhh----c-------------------------------------------------------cCCCCcchHHHHH
Q 004157 241 SKTEELR----N-------------------------------------------------------TASIPKSLLPDYQ 261 (771)
Q Consensus 241 ~~~~~l~----~-------------------------------------------------------~~~IP~~l~~~i~ 261 (771)
|...... . ...++..+.+++.
T Consensus 231 f~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~ 310 (388)
T 3oz6_A 231 FPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLD 310 (388)
T ss_dssp CCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHH
Confidence 8532110 0 0156778999999
Q ss_pred HHhccCCCCCCChHHHhhCCCCCc
Q 004157 262 RLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 262 ~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
+||..||.+||++.++++| +||+
T Consensus 311 ~~L~~dP~~R~t~~e~l~H-p~~~ 333 (388)
T 3oz6_A 311 KLLQFNPNKRISANDALKH-PFVS 333 (388)
T ss_dssp HHCCSSGGGSCCHHHHTTS-TTTT
T ss_pred HhhccCcccCCCHHHHhCC-HHHH
Confidence 9999999999999999999 4543
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-36 Score=322.57 Aligned_cols=245 Identities=17% Similarity=0.252 Sum_probs=193.5
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
....+|++.+.||.|+ | +||+|+++ +|+.|+||++............+.+|++++++|+||||++++++++.+
T Consensus 18 ~l~~~y~~~~~lG~G~~g--~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--- 91 (311)
T 3niz_A 18 GLMEKYQKLEKVGEGTYG--VVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSE--- 91 (311)
T ss_dssp CSSCEEEEEEEEEECSSC--EEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCS---
T ss_pred chHhhhHhhhhccCCCCe--EEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccC---
Confidence 3456899999999998 8 99999986 599999999986554445567788999999999999999999999863
Q ss_pred cCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 95 ATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+||||||+ ++|.+.+...... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+||
T Consensus 92 -----~~~~lv~e~~~~~l~~~~~~~~~~--~~~~~~~~~~~qi~~~l~~LH~-~~ivH~Dikp~NIl~~~~~~~kl~Df 163 (311)
T 3niz_A 92 -----RCLTLVFEFMEKDLKKVLDENKTG--LQDSQIKIYLYQLLRGVAHCHQ-HRILHRDLKPQNLLINSDGALKLADF 163 (311)
T ss_dssp -----SCEEEEEECCSEEHHHHHHTCTTC--CCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEECTTCCEEECCC
T ss_pred -----CEEEEEEcCCCCCHHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHH-CCcccCCCchHhEEECCCCCEEEccC
Confidence 4899999999 6788888764321 2344566779999999999997 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h--
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R-- 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~-- 247 (771)
|++......... .....++..|+|||++.+. ..++.++|+|||||++|+|++|.+||..... .
T Consensus 164 g~a~~~~~~~~~------~~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i 232 (311)
T 3niz_A 164 GLARAFGIPVRS------YTHEVVTLWYRAPDVLMGS-----KKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKI 232 (311)
T ss_dssp TTCEETTSCCC---------CCCCCCTTCCHHHHTTC-----CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHH
T ss_pred cCceecCCCccc------ccCCcccCCcCCHHHhcCC-----CCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence 999876532111 1122345689999998653 3567899999999999999999988853210 0
Q ss_pred ------------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 ------------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 ------------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||..||.+||++.++++| +||++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h-p~f~~ 306 (311)
T 3niz_A 233 FSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH-PYFKD 306 (311)
T ss_dssp HHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS-GGGTT
T ss_pred HHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC-ccccc
Confidence 012355678899999999999999999999998 66654
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-36 Score=321.01 Aligned_cols=240 Identities=15% Similarity=0.250 Sum_probs=191.6
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.||.|+ | +||+|++ .+|+.|+||++............+.+|++++++|+||||++++++++..
T Consensus 3 ~y~~~~~lg~G~~g--~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------- 72 (288)
T 1ob3_A 3 KYHGLEKIGEGTYG--VVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTK------- 72 (288)
T ss_dssp SEEEEEEEEEETTE--EEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECS-------
T ss_pred cchhhhhcccCCCE--EEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccC-------
Confidence 699999999998 8 9999998 5799999999986544444456778999999999999999999999863
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
..+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++.
T Consensus 73 -~~~~lv~e~~~~~l~~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 148 (288)
T 1ob3_A 73 -KRLVLVFEHLDQDLKKLLDVCEG--GLESVTAKSFLLQLLNGIAYCHD-RRVLHRDLKPQNLLINREGELKIADFGLAR 148 (288)
T ss_dssp -SCEEEEEECCSEEHHHHHHTSTT--CCCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEECTTSCEEECCTTHHH
T ss_pred -CeEEEEEEecCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEEcCCCCEEEeECcccc
Confidence 4799999999 678888876431 12344566779999999999997 899999999999999999999999999998
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R------ 247 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~------ 247 (771)
........ .....++..|+|||++.+. ..++.++|+|||||++|+|++|.+||..... .
T Consensus 149 ~~~~~~~~------~~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~ 217 (288)
T 1ob3_A 149 AFGIPVRK------YTHEIVTLWYRAPDVLMGS-----KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRIL 217 (288)
T ss_dssp HHCC---------------CCCTTCCHHHHTTC-----CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred ccCccccc------cccccccccccCchheeCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH
Confidence 76432110 1122345689999998653 3567899999999999999999988853210 0
Q ss_pred -------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 -------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 -------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
....++..+.+++.+||..||.+||++.++++| +||+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h-p~f~ 285 (288)
T 1ob3_A 218 GTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH-AYFK 285 (288)
T ss_dssp CCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS-GGGG
T ss_pred CCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC-cchh
Confidence 012366778899999999999999999999998 5554
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-35 Score=327.73 Aligned_cols=241 Identities=18% Similarity=0.203 Sum_probs=198.2
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch----hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD----GHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~----~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~ 92 (771)
...|++++.||.|+ | +||+|+++.+|+.|+||++.+..... ...+.+.+|+.+|+.|+||||+++++++++.
T Consensus 11 ~~~y~~~~~LG~G~fg--~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~- 87 (361)
T 2yab_A 11 EDFYDIGEELGSGQFA--IVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENR- 87 (361)
T ss_dssp GGTEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECS-
T ss_pred hhceEEeeEEeeCcCE--EEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeC-
Confidence 44699999999998 8 99999999999999999998754322 2356788999999999999999999999863
Q ss_pred cCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC----
Q 004157 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL---- 166 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G---- 166 (771)
..+||||||| ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.++
T Consensus 88 -------~~~~lv~e~~~gg~L~~~l~~~~~---l~~~~~~~i~~qi~~aL~~LH~-~givHrDlkp~NIll~~~~~~~~ 156 (361)
T 2yab_A 88 -------TDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLHT-KKIAHFDLKPENIMLLDKNIPIP 156 (361)
T ss_dssp -------SEEEEEEECCCSCBHHHHHTTCSC---CBHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEESCTTSSSC
T ss_pred -------CEEEEEEEcCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEEeCCCCCcc
Confidence 4899999999 579999876432 3445567779999999999997 8999999999999999887
Q ss_pred cEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh
Q 004157 167 DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL 246 (771)
Q Consensus 167 ~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l 246 (771)
.+||+|||++........ .....++..|+|||++.+ ..++.++|+|||||++|+|++|.+||.....
T Consensus 157 ~vkl~DFG~a~~~~~~~~-------~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~ 223 (361)
T 2yab_A 157 HIKLIDFGLAHEIEDGVE-------FKNIFGTPEFVAPEIVNY------EPLGLEADMWSIGVITYILLSGASPFLGDTK 223 (361)
T ss_dssp CEEECCCSSCEECCTTCC-------CCCCCSCGGGCCHHHHTT------CCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH
T ss_pred CEEEEecCCceEcCCCCc-------cccCCCCccEECchHHcC------CCCCccccHHHHHHHHHHHHhCCCCCCCCCH
Confidence 799999999987654211 112234558999999876 3677899999999999999999999854321
Q ss_pred h----------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 247 R----------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 247 ~----------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
. ....++..+.+++.+||..+|.+||++.++++| +||.+
T Consensus 224 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h-p~~~~ 278 (361)
T 2yab_A 224 QETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH-PWITP 278 (361)
T ss_dssp HHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS-TTTSC
T ss_pred HHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcC-cCcCC
Confidence 1 013567789999999999999999999999999 56653
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=331.91 Aligned_cols=241 Identities=17% Similarity=0.216 Sum_probs=195.4
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
.+|++.+.||.|+ | +||+|+++.+|+.|+||++.+..... .....+.+|+++++.++||||++++++++..
T Consensus 9 ~~Y~i~~~lG~G~~g--~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~----- 81 (336)
T 3h4j_B 9 GPYIIRETLGEGSFG--KVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTP----- 81 (336)
T ss_dssp TTEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECS-----
T ss_pred CCEEEEEEEecCCCe--EEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC-----
Confidence 4799999999998 8 99999999999999999997532111 2234688999999999999999999999874
Q ss_pred CcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 97 ~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+||||||+ ++|.+++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 82 ---~~~~lv~E~~~g~l~~~l~~~~~l---~~~~~~~i~~qi~~aL~~LH~-~givH~Dlkp~NIll~~~~~~kl~DFG~ 154 (336)
T 3h4j_B 82 ---TDIVMVIEYAGGELFDYIVEKKRM---TEDEGRRFFQQIICAIEYCHR-HKIVHRDLKPENLLLDDNLNVKIADFGL 154 (336)
T ss_dssp ---SEEEEEECCCCEEHHHHHHHHCSC---CHHHHHHHHHHHHHHHHHHHH-HTCCCCCCSTTTEEECTTCCEEECCSSC
T ss_pred ---CEEEEEEECCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeEecCCchhhEEEcCCCCEEEEEecc
Confidence 4899999999 6788888776432 334456679999999999997 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhcc------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT------ 249 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~~------ 249 (771)
+........ .....++..|+|||++.+. ...+.++|+|||||++|+|++|..||.......+
T Consensus 155 s~~~~~~~~-------~~~~~gt~~y~aPE~~~~~-----~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~ 222 (336)
T 3h4j_B 155 SNIMTDGNF-------LKTSCGSPNYAAPEVINGK-----LYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNS 222 (336)
T ss_dssp TBTTTTSBT-------TCCCTTSTTTSCGGGSCCS-----GGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCS
T ss_pred ceeccCCcc-------cccccCCcCcCCHHHHcCC-----CCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHc
Confidence 986654211 1123455689999998763 1225689999999999999999999865433221
Q ss_pred ------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 250 ------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 250 ------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
..++..+.+++++||..||.+||++.++++| +||+.
T Consensus 223 ~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h-p~~~~ 264 (336)
T 3h4j_B 223 CVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD-PWFNV 264 (336)
T ss_dssp SCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC-HHHHT
T ss_pred CCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC-hhhcc
Confidence 2356778999999999999999999999998 55544
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-36 Score=321.83 Aligned_cols=256 Identities=20% Similarity=0.231 Sum_probs=196.0
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc---
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA--- 95 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~--- 95 (771)
+|++.+.||.|+ | +||+|+++.+|+.||||++.... .+...+.+.+|+++|++|+||||+++++++.......
T Consensus 7 ~y~~~~~lG~G~~g--~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 7 DFEPIQCMGRGGFG--VVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HEEEEEEEECC-CS--EEEEEEETTTCCEEEEEEEECCS-TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred cCceeeEecCCCCe--EEEEEEEcCCCcEEEEEEeecCC-chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 599999999998 9 99999999999999999998654 3345677899999999999999999999986542100
Q ss_pred ----------------------------------------------CCcccEEEEEecCC--cchHHHHHHhCCCCCCcH
Q 004157 96 ----------------------------------------------TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRD 127 (771)
Q Consensus 96 ----------------------------------------------~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~ 127 (771)
.....++|+||||| ++|.++++..........
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~ 163 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREH 163 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCH
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhh
Confidence 01123589999999 579999988665444444
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCC------CccccccccCCCC
Q 004157 128 EYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANG------PMLQYAWLVGAQY 201 (771)
Q Consensus 128 ~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~------~~~~~~~~~~~~Y 201 (771)
..+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++............ ........++..|
T Consensus 164 ~~~~~i~~qi~~aL~~LH~-~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y 242 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLHS-KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLY 242 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGG
T ss_pred HHHHHHHHHHHHHHHHHHh-CCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCc
Confidence 4566779999999999997 89999999999999999999999999999877653211100 0011122345589
Q ss_pred CChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh--h---hc------cCCCCcchHHHHHHHhccCCCC
Q 004157 202 KPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE--L---RN------TASIPKSLLPDYQRLLSSMPSR 270 (771)
Q Consensus 202 ~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~--l---~~------~~~IP~~l~~~i~~lL~~~P~~ 270 (771)
+|||++.+ ..++.++|+|||||++|+|++|..++.... . .. ....+..+.+++.+||+.+|.+
T Consensus 243 ~aPE~~~~------~~~~~~~Di~slG~il~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~ 316 (332)
T 3qd2_B 243 MSPEQIHG------NNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTE 316 (332)
T ss_dssp SCHHHHHC------CCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHHCSSGGG
T ss_pred cChHHhcC------CCCcchhhHHHHHHHHHHHHHcCCChhHHHHHHHHhhccCCCcccccCChhHHHHHHHHccCCCCc
Confidence 99999876 367789999999999999999876653211 0 11 0123456788999999999999
Q ss_pred CCChHHHhhCCCCCcc
Q 004157 271 RLNSSKLIENSEYFQN 286 (771)
Q Consensus 271 Rps~~~lL~~~~fF~n 286 (771)
||++.++++| +||++
T Consensus 317 Rps~~~~l~~-~~f~~ 331 (332)
T 3qd2_B 317 RPEATDIIEN-AIFEN 331 (332)
T ss_dssp SCCHHHHHHS-TTCCC
T ss_pred CCCHHHHhhc-hhhhc
Confidence 9999999998 67764
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-35 Score=316.97 Aligned_cols=250 Identities=18% Similarity=0.260 Sum_probs=191.8
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc---hhHHHHHHHHHHHHhcCC---CCCeeEEeeeE
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ---DGHLAAARNGVKRLRTVR---HPNILAFLHST 88 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~---~~~~~~~~~ei~~Lk~Lr---HPnIlkv~d~~ 88 (771)
+...+|++.+.||.|+ | +||+|+++.+|+.|+||++...... ......+.+|++.+++|+ ||||+++++++
T Consensus 6 ~~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~ 83 (308)
T 3g33_A 6 MATSRYEPVAEIGVGAYG--TVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVC 83 (308)
T ss_dssp ----CCEEEEEECCSSSC--CEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEE
T ss_pred ccccceEEEEEEecCCCe--EEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeee
Confidence 3456899999999998 8 9999999999999999999753321 112234556776666664 99999999999
Q ss_pred EecccCcCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCc
Q 004157 89 EVENIDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD 167 (771)
Q Consensus 89 e~e~~d~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~ 167 (771)
.....+. ...+|+|||++ ++|.+++....... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.
T Consensus 84 ~~~~~~~---~~~~~lv~e~~~~~L~~~~~~~~~~~-~~~~~~~~i~~qi~~al~~lH~-~~ivH~Dlkp~Nil~~~~~~ 158 (308)
T 3g33_A 84 ATSRTDR---EIKVTLVFEHVDQDLRTYLDKAPPPG-LPAETIKDLMRQFLRGLDFLHA-NCIVHRDLKPENILVTSGGT 158 (308)
T ss_dssp EECCSSS---EEEEEEEEECCCCBHHHHHHTCCTTC-SCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCTTTEEECTTSC
T ss_pred eccCCCC---ceeEEEEehhhhcCHHHHHhhccCCC-CCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEEcCCCC
Confidence 8643221 23689999999 68999988754322 2344567779999999999997 89999999999999999999
Q ss_pred EEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-
Q 004157 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL- 246 (771)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l- 246 (771)
+||+|||++....... ......++..|+|||++.+ ..++.++|+|||||++|+|++|.+||.....
T Consensus 159 ~kl~Dfg~a~~~~~~~-------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~ 225 (308)
T 3g33_A 159 VKLADFGLARIYSYQM-------ALTPVVVTLWYRAPEVLLQ------STYATPVDMWSVGCIFAEMFRRKPLFCGNSEA 225 (308)
T ss_dssp EEECSCSCTTTSTTCC-------CSGGGGCCCSSCCHHHHHT------SCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHH
T ss_pred EEEeeCccccccCCCc-------ccCCccccccccCchHHcC------CCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 9999999998664321 1122345668999999876 3577899999999999999999998853211
Q ss_pred ---h-----------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 247 ---R-----------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 247 ---~-----------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
. ....++..+.+++.+||..||.+||++.++|+| +||++
T Consensus 226 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h-~~~~~ 302 (308)
T 3g33_A 226 DQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH-SYLHK 302 (308)
T ss_dssp HHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS-TTC--
T ss_pred HHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC-ccccC
Confidence 0 012466778899999999999999999999999 55543
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-36 Score=325.20 Aligned_cols=242 Identities=16% Similarity=0.206 Sum_probs=197.3
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
.+|++.+.||.|+ | +||+|+++.+|+.||||++.+... .......+.+|+++|+.++||||++++++++..
T Consensus 5 ~~y~~~~~lG~G~fg--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~----- 77 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFG--KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH----- 77 (337)
T ss_dssp GGEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECS-----
T ss_pred HHeEEEEEEecCCCe--EEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeC-----
Confidence 4699999999998 8 999999999999999999975321 112355678899999999999999999999874
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+||||||| ++|..++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 78 ---~~~~lv~E~~~gg~L~~~l~~~~~~---~~~~~~~~~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~g~vkL~DFG 150 (337)
T 1o6l_A 78 ---DRLCFVMEYANGGELFFHLSRERVF---TEERARFYGAEIVSALEYLHS-RDVVYRDIKLENLMLDKDGHIKITDFG 150 (337)
T ss_dssp ---SEEEEEEECCTTCBHHHHHHHHSCC---CHHHHHHHHHHHHHHHHHHHH-TTCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred ---CEEEEEEeCCCCCcHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeecCcCCHHHEEECCCCCEEEeecc
Confidence 4899999999 4799998876432 344566779999999999997 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------- 247 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------- 247 (771)
++........ ......++..|+|||++.+ ..++.++|+|||||++|||++|..||......
T Consensus 151 ~a~~~~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~ 218 (337)
T 1o6l_A 151 LCKEGISDGA------TMKTFCGTPEYLAPEVLED------NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 218 (337)
T ss_dssp TCBCSCCTTC------CBCCCEECGGGCCGGGGSS------SCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred chhhcccCCC------cccccccChhhCChhhhcC------CCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence 9986433211 1122345568999999876 36778999999999999999999988543211
Q ss_pred -----ccCCCCcchHHHHHHHhccCCCCCC-----ChHHHhhCCCCCcch
Q 004157 248 -----NTASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENSEYFQNK 287 (771)
Q Consensus 248 -----~~~~IP~~l~~~i~~lL~~~P~~Rp-----s~~~lL~~~~fF~n~ 287 (771)
....++..+.+++.+||..+|.+|+ ++.++++| +||.+.
T Consensus 219 ~~~~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h-~~f~~~ 267 (337)
T 1o6l_A 219 MEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH-RFFLSI 267 (337)
T ss_dssp HCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS-GGGTTC
T ss_pred cCCCCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC-CCcCCC
Confidence 1235677899999999999999999 89999998 666553
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-35 Score=322.88 Aligned_cols=259 Identities=17% Similarity=0.269 Sum_probs=197.8
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.+|++.+.||.|+ | +||+|+++.+|+.|+||++............+.+|+++|+.++||||+++++++.........
T Consensus 17 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFG--EVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR 94 (351)
T ss_dssp GGEEEEEECSSCSTT--SEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred cceeEEEEEecCCCc--EEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeecccccccc
Confidence 4799999999999 8 899999999999999999976654444455677899999999999999999999874321111
Q ss_pred cccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
....+||||||| ++|...+...... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 95 ~~~~~~lv~e~~~~~l~~~l~~~~~~--~~~~~~~~i~~qi~~~l~~LH~-~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 95 CKGSIYLVFDFCEHDLAGLLSNVLVK--FTLSEIKRVMQMLLNGLYYIHR-NKILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp --CEEEEEEECCSEEHHHHHHCTTSC--CCHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCceEEEEEeccCCCHHHHHhhccCC--CCHHHHHHHHHHHHHHHHHHHH-CCeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 134799999999 5788777654321 3344567779999999999997 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh----c----
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----N---- 248 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~----~---- 248 (771)
............ ......++..|+|||++.+. ..++.++|+|||||++|+|++|.+||...... .
T Consensus 172 ~~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~-----~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~ 244 (351)
T 3mi9_A 172 RAFSLAKNSQPN--RYTNRVVTLWYRPPELLLGE-----RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQL 244 (351)
T ss_dssp EECCCCSSSSCC--CCCSSCSCGGGCCHHHHTTC-----CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred cccccccccccc--ccCCcccccCccCchhhcCC-----CCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence 876543221111 11223345589999998653 35678999999999999999999988542210 0
Q ss_pred cCC------------------------------------CCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcchhh
Q 004157 249 TAS------------------------------------IPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKLV 289 (771)
Q Consensus 249 ~~~------------------------------------IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n~lv 289 (771)
... .++.+.+++.+||..||.+||++.++++|+||...+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~ 321 (351)
T 3mi9_A 245 CGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMP 321 (351)
T ss_dssp HCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSSSCC
T ss_pred hCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCCCCc
Confidence 000 14457899999999999999999999999555444443
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-35 Score=328.89 Aligned_cols=251 Identities=14% Similarity=0.128 Sum_probs=198.4
Q ss_pred CCceecCCCCCC--C-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 19 LPYNIGDPYPSA--W-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 19 ~~Y~i~e~ig~G--~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
.+|++.+.||.| + | +||+|+++.+|+.|+||++............+++|+++++.|+||||+++++++..+
T Consensus 25 ~~y~~~~~lG~G~~~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---- 98 (389)
T 3gni_B 25 GCYELLTVIGKGFEDLM--TVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIAD---- 98 (389)
T ss_dssp GGEEEEEEEEEETTTTE--EEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET----
T ss_pred CcEEEEecccCCcCCce--EEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEEC----
Confidence 469999999999 5 6 999999999999999999987655556678899999999999999999999999874
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+||||||| ++|.+++....... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+||
T Consensus 99 ----~~~~lv~e~~~~~~L~~~l~~~~~~~-~~~~~~~~~~~qi~~~l~~LH~-~~ivHrDlkp~NIll~~~~~~kl~df 172 (389)
T 3gni_B 99 ----NELWVVTSFMAYGSAKDLICTHFMDG-MNELAIAYILQGVLKALDYIHH-MGYVHRSVKASHILISVDGKVYLSGL 172 (389)
T ss_dssp ----TEEEEEEECCTTCBHHHHHHHTCTTC-CCHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEECTTCCEEECCG
T ss_pred ----CEEEEEEEccCCCCHHHHHhhhcccC-CCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCCCEEEccc
Confidence 4899999999 58999998753222 3345567779999999999997 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCC-ccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-----
Q 004157 174 DVLSEFDGNNEAANGP-MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----- 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~-~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~----- 247 (771)
|++............. .......++..|+|||++.+.. ..++.++|+|||||++|+|++|..||......
T Consensus 173 g~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~ 248 (389)
T 3gni_B 173 RSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNL----QGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLE 248 (389)
T ss_dssp GGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTS----SCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHH
T ss_pred ccceeeccccccccccccccccccccccccCHHHHhccC----CCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence 9986553321111000 0011123445799999987521 24678999999999999999999988542110
Q ss_pred -----------------------------------------------------ccCCCCcchHHHHHHHhccCCCCCCCh
Q 004157 248 -----------------------------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNS 274 (771)
Q Consensus 248 -----------------------------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~ 274 (771)
....++..+.+++.+||..||.+||++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta 328 (389)
T 3gni_B 249 KLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSA 328 (389)
T ss_dssp C--------------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCH
T ss_pred HhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCH
Confidence 012356678899999999999999999
Q ss_pred HHHhhCCCCCcc
Q 004157 275 SKLIENSEYFQN 286 (771)
Q Consensus 275 ~~lL~~~~fF~n 286 (771)
.++|+| +||+.
T Consensus 329 ~ell~h-p~f~~ 339 (389)
T 3gni_B 329 STLLNH-SFFKQ 339 (389)
T ss_dssp HHHTTS-GGGGG
T ss_pred HHHhcC-HHHHH
Confidence 999998 56654
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-35 Score=326.98 Aligned_cols=244 Identities=16% Similarity=0.287 Sum_probs=194.2
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
..|++.+.||.|+ | +||+|+++.+|+.|+||++..........+.+.+|+++|+.|+||||+++++++...... .
T Consensus 25 ~~y~~~~~lG~G~~g--~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~--~ 100 (367)
T 1cm8_A 25 AVYRDLQPVGSGAYG--AVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETL--D 100 (367)
T ss_dssp SSEEEEEEC--------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSST--T
T ss_pred ceEEEeEEeeecCCe--EEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCcc--c
Confidence 4699999999998 8 999999999999999999976655556677889999999999999999999999764210 0
Q ss_pred cccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
....+||||||+ ++|.++++...+ ....+..+++||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 101 ~~~~~~lv~e~~~~~L~~~~~~~~l----~~~~~~~~~~qi~~~L~~LH~-~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 175 (367)
T 1cm8_A 101 DFTDFYLVMPFMGTDLGKLMKHEKL----GEDRIQFLVYQMLKGLRYIHA-AGIIHRDLKPGNLAVNEDCELKILDFGLA 175 (367)
T ss_dssp TCCCCEEEEECCSEEHHHHHHHCCC----CHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred cCceEEEEEecCCCCHHHHHhcCCC----CHHHHHHHHHHHHHHHHHHHH-CCccccCcCHHHEEEcCCCCEEEEeeecc
Confidence 124679999999 579998887432 345567789999999999997 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h-----
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R----- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~----- 247 (771)
+..... .....++..|+|||++.+. ..++.++|+|||||++|||++|.+||...+. .
T Consensus 176 ~~~~~~---------~~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~ 241 (367)
T 1cm8_A 176 RQADSE---------MTGYVVTRWYRAPEVILNW-----MRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKV 241 (367)
T ss_dssp EECCSS---------CCSSCSCGGGCCTHHHHTT-----TCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred cccccc---------cCcCcCCCCcCCHHHHhCC-----CCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 876432 1122445589999998753 3577899999999999999999998853211 0
Q ss_pred ----------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 ----------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 ----------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||..||.+||++.++++| +||++
T Consensus 242 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h-p~f~~ 313 (367)
T 1cm8_A 242 TGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH-PYFES 313 (367)
T ss_dssp HCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS-GGGTT
T ss_pred cCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC-hHHHh
Confidence 012456778999999999999999999999999 56653
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=320.88 Aligned_cols=240 Identities=15% Similarity=0.200 Sum_probs=197.2
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
.+|++.+.||.|+ | +||+|+++.+|+.|+||++.+.... ....+.+.+|+.+++.++||||+++++++++.
T Consensus 6 ~~y~~~~~lG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~----- 78 (318)
T 1fot_A 6 QDFQILRTLGTGSFG--RVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDA----- 78 (318)
T ss_dssp GGEEEEEEEEECSSC--EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECS-----
T ss_pred HHcEEEEEEeeCCCE--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeC-----
Confidence 4699999999998 8 9999999999999999999853211 12356778999999999999999999999863
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+|+||||| ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 79 ---~~~~lv~e~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~g~~kL~Dfg 151 (318)
T 1fot_A 79 ---QQIFMIMDYIEGGELFSLLRKSQR---FPNPVAKFYAAEVCLALEYLHS-KDIIYRDLKPENILLDKNGHIKITDFG 151 (318)
T ss_dssp ---SEEEEEECCCCSCBHHHHHHHTSS---CCHHHHHHHHHHHHHHHHHHHT-TTEECCCCCGGGEEECTTSCEEECCCS
T ss_pred ---CEEEEEEeCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCccccCCChheEEEcCCCCEEEeecC
Confidence 4899999999 589999987543 2344466679999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------- 247 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------- 247 (771)
++...... .....++..|+|||++.+ ..++.++|+|||||++|||++|.+||......
T Consensus 152 ~a~~~~~~---------~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~ 216 (318)
T 1fot_A 152 FAKYVPDV---------TYTLCGTPDYIAPEVVST------KPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKIL 216 (318)
T ss_dssp SCEECSSC---------BCCCCSCTTTCCHHHHTT------CCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH
T ss_pred cceecCCc---------cccccCCccccCHhHhcC------CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 99875431 122345568999999876 46778999999999999999999988543211
Q ss_pred -----ccCCCCcchHHHHHHHhccCCCCCC-----ChHHHhhCCCCCcchh
Q 004157 248 -----NTASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENSEYFQNKL 288 (771)
Q Consensus 248 -----~~~~IP~~l~~~i~~lL~~~P~~Rp-----s~~~lL~~~~fF~n~l 288 (771)
....++..+.+++.+||..+|.+|+ +++++++| +||++..
T Consensus 217 ~~~~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h-p~f~~~~ 266 (318)
T 1fot_A 217 NAELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH-PWFKEVV 266 (318)
T ss_dssp HCCCCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS-GGGSSCC
T ss_pred hCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC-ccccCCC
Confidence 1134667899999999999999999 89999998 6776543
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-35 Score=333.57 Aligned_cols=240 Identities=17% Similarity=0.234 Sum_probs=199.0
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
..|++++.||.|+ | +||+|+++.+|+.|++|++..........+.+.+|+++++.|+||||++++++++++
T Consensus 11 ~~Y~i~~~LG~G~fg--~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 82 (444)
T 3soa_A 11 EEYQLFEELGKGAFS--VVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEE------ 82 (444)
T ss_dssp HHEEEEEEEEEC--C--EEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECS------
T ss_pred CCeEEEEEeccCCCe--EEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEEC------
Confidence 4699999999999 9 999999999999999999998766556677889999999999999999999999864
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEc---CCCcEEEEc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT---QTLDWKLHA 172 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~---~~G~~KL~d 172 (771)
..+||||||| ++|.+.+..... .....+..++.||+.||.|||+ .+++||||||+||+++ .+|.+||+|
T Consensus 83 --~~~~lv~E~~~gg~L~~~i~~~~~---~~e~~~~~i~~qil~aL~~lH~-~givHrDlKp~NIll~~~~~~~~vkL~D 156 (444)
T 3soa_A 83 --GHHYLIFDLVTGGELFEDIVAREY---YSEADASHCIQQILEAVLHCHQ-MGVVHRNLKPENLLLASKLKGAAVKLAD 156 (444)
T ss_dssp --SEEEEEECCCBCCBHHHHHHHCSC---CCHHHHHHHHHHHHHHHHHHHH-TTCBCCCCSSTTEEESBSSTTCCEEECC
T ss_pred --CEEEEEEEeCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCccccCCCHHHEEEeccCCCCcEEEcc
Confidence 4899999999 579998887643 2344466679999999999997 8999999999999998 468899999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-----
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----- 247 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~----- 247 (771)
||++......... .....++..|+|||++.+ ..++.++|+|||||++|+|++|.+||......
T Consensus 157 FG~a~~~~~~~~~------~~~~~gt~~Y~APE~l~~------~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~ 224 (444)
T 3soa_A 157 FGLAIEVEGEQQA------WFGFAGTPGYLSPEVLRK------DPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQ 224 (444)
T ss_dssp CSSCBCCCTTCCB------CCCSCSCGGGCCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred CceeEEecCCCce------eecccCCcccCCHHHhcC------CCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHH
Confidence 9999876543211 122344568999999876 35778999999999999999999998543211
Q ss_pred -----------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 -----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 -----------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
....++..+.+++.+||..||.+||++.++|+| +||+
T Consensus 225 i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h-p~~~ 272 (444)
T 3soa_A 225 IKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH-PWIS 272 (444)
T ss_dssp HHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS-CTTH
T ss_pred HHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC-cccc
Confidence 113578889999999999999999999999999 4554
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-36 Score=319.96 Aligned_cols=244 Identities=18% Similarity=0.267 Sum_probs=188.9
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch------------------------hHHHHHHHHH
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD------------------------GHLAAARNGV 70 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~------------------------~~~~~~~~ei 70 (771)
+.-.+|++.+.||.|+ | +||+|+++.+|+.|+||++....... ...+.+.+|+
T Consensus 10 ~~~~~y~~~~~lG~G~~g--~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~ 87 (298)
T 2zv2_A 10 VQLNQYTLKDEIGKGSYG--VVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEI 87 (298)
T ss_dssp CEETTEEEEEEEEC--CC--EEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHH
T ss_pred eeecceEEEeEEeecCCE--EEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHH
Confidence 3445799999999998 8 99999999999999999998653211 1235688999
Q ss_pred HHHhcCCCCCeeEEeeeEEecccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCC
Q 004157 71 KRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDC 148 (771)
Q Consensus 71 ~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~ 148 (771)
++|++|+||||++++++++... ...+||||||+ ++|.+++... ......+..++.||+.||.|||+ .
T Consensus 88 ~~l~~l~h~~iv~~~~~~~~~~------~~~~~lv~e~~~~~~l~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~-~ 156 (298)
T 2zv2_A 88 AILKKLDHPNVVKLVEVLDDPN------EDHLYMVFELVNQGPVMEVPTLK----PLSEDQARFYFQDLIKGIEYLHY-Q 156 (298)
T ss_dssp HHHHTCCCTTBCCEEEEEECSS------SSEEEEEEECCTTCBSCCSSCSS----CCCHHHHHHHHHHHHHHHHHHHH-T
T ss_pred HHHHhCCCCCCCeEEEEEEcCC------CCEEEEEEecCCCCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHH-C
Confidence 9999999999999999998643 34899999999 4566543322 22344567779999999999997 8
Q ss_pred CceecCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHH
Q 004157 149 KLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLG 228 (771)
Q Consensus 149 ~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG 228 (771)
+++||||||+||+++.+|.+||+|||++........ ......++..|+|||++.+... ..++.++|+||||
T Consensus 157 ~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~---~~~~~~~Di~slG 227 (298)
T 2zv2_A 157 KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA------LLSNTVGTPAFMAPESLSETRK---IFSGKALDVWAMG 227 (298)
T ss_dssp TEECCCCCGGGEEECTTSCEEECCCTTCEECSSSSC------EECCCCSCGGGCCGGGCCTTCC---CEESHHHHHHHHH
T ss_pred CeeccCCCHHHEEECCCCCEEEecCCCccccccccc------cccCCcCCccccChhhhccCCC---CCCCchhhhHhHH
Confidence 999999999999999999999999999987654211 1112234558999999875310 0125678999999
Q ss_pred HHHHHHhhCCCCCChhhhh--------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 229 CLIYELFSGMRLSKTEELR--------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 229 ~li~el~~g~~p~~~~~l~--------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
|++|+|++|..||...... ....++..+.+++.+||..+|.+||++.++++|+
T Consensus 228 ~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp 294 (298)
T 2zv2_A 228 VTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHP 294 (298)
T ss_dssp HHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCH
T ss_pred HHHHHHHHCCCCCCCccHHHHHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcCc
Confidence 9999999999888643211 1235778899999999999999999999999984
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-35 Score=316.44 Aligned_cols=242 Identities=21% Similarity=0.249 Sum_probs=192.8
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.+|++.+.||.|+ | +||+|+++.+|+.|+||++..........+.+.+|++++++++||||++++++++..
T Consensus 3 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------ 74 (311)
T 4agu_A 3 EKYEKIGKIGEGSYG--VVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRK------ 74 (311)
T ss_dssp CCEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET------
T ss_pred ccceEeeEEeecCCe--EEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecC------
Confidence 3699999999998 8 999999999999999999987665555677888999999999999999999999863
Q ss_pred cccEEEEEecCCc--chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+|+||||+. .|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 75 --~~~~lv~e~~~~~~l~~~~~~~~~---~~~~~~~~i~~~l~~~l~~lH~-~~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 148 (311)
T 4agu_A 75 --RRLHLVFEYCDHTVLHELDRYQRG---VPEHLVKSITWQTLQAVNFCHK-HNCIHRDVKPENILITKHSVIKLCDFGF 148 (311)
T ss_dssp --TEEEEEEECCSEEHHHHHHHTSSC---CCHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred --CeEEEEEEeCCCchHHHHHhhhcC---CCHHHHHHHHHHHHHHHHHHHH-CCCcCCCCChhhEEEcCCCCEEEeeCCC
Confidence 48999999993 46666654432 2344566779999999999997 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh--------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~-------- 247 (771)
+......... .....++..|+|||++.+. ..++.++|+|||||++|+|++|.+||......
T Consensus 149 ~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 217 (311)
T 4agu_A 149 ARLLTGPSDY------YDDEVATRWYRSPELLVGD-----TQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRK 217 (311)
T ss_dssp CEECC------------------GGGCCHHHHHTC-----SCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred chhccCcccc------cCCCcCCccccChHHHhcC-----CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 9876542111 1122344579999998653 35678999999999999999999887532100
Q ss_pred -----------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 -----------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 -----------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||..+|.+||++.++++| +||++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h-p~f~~ 290 (311)
T 4agu_A 218 TLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH-PYFEN 290 (311)
T ss_dssp HHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS-GGGTT
T ss_pred HhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC-hHHHh
Confidence 013567778999999999999999999999998 56654
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=327.30 Aligned_cols=237 Identities=16% Similarity=0.244 Sum_probs=196.3
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|++.+.||.|+ | +||+|+++.+|+.|+||++..........+.+.+|+++++.|+||||++++++++.+
T Consensus 30 ~y~~~~~lG~G~~g--~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~------- 100 (362)
T 2bdw_A 30 NYDVKEELGKGAFS--VVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEE------- 100 (362)
T ss_dssp HEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECS-------
T ss_pred CeEEeeEEecCCCe--EEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC-------
Confidence 599999999998 8 999999999999999999997665556677899999999999999999999999864
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC---cEEEEcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL---DWKLHAF 173 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G---~~KL~dF 173 (771)
..+||||||| ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.++ .+||+||
T Consensus 101 -~~~~lv~e~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~al~~lH~-~~ivH~Dlkp~NIll~~~~~~~~~kl~Df 175 (362)
T 2bdw_A 101 -SFHYLVFDLVTGGELFEDIVAREF---YSEADASHCIQQILESIAYCHS-NGIVHRNLKPENLLLASKAKGAAVKLADF 175 (362)
T ss_dssp -SEEEEEECCCCSCBHHHHHTTCSC---CCHHHHHHHHHHHHHHHHHHHH-TTCBCCCCSGGGEEESCSSTTCCEEECCC
T ss_pred -CEEEEEEecCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeEeccCchHHEEEecCCCCCCEEEeec
Confidence 4899999999 479888876543 2344566779999999999997 8999999999999998654 5999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------ 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------ 247 (771)
|++........ .....++..|+|||++.+ ..++.++|+|||||++|+|++|.+||......
T Consensus 176 G~a~~~~~~~~-------~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i 242 (362)
T 2bdw_A 176 GLAIEVNDSEA-------WHGFAGTPGYLSPEVLKK------DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 242 (362)
T ss_dssp TTCBCCTTCCS-------CCCSCSCTTTCCHHHHTT------CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred CcceEecCCcc-------cccCCCCccccCHHHHcc------CCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 99987654211 112344568999999876 35778999999999999999999988543211
Q ss_pred ----------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 248 ----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 248 ----------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
....+|..+.+++.+||..+|.+||++.++++|+ ||
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp-~~ 288 (362)
T 2bdw_A 243 KAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVP-WI 288 (362)
T ss_dssp HHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSH-HH
T ss_pred HhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCc-cc
Confidence 1134678899999999999999999999999984 44
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-36 Score=324.05 Aligned_cols=242 Identities=17% Similarity=0.210 Sum_probs=188.5
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.+|++.+.||.|+ | +||+|+++.+|+.|+||++............+.+|+++|++|+||||++++++++.+
T Consensus 34 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------ 105 (329)
T 3gbz_A 34 DRYRRITKLGEGTYG--EVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHN------ 105 (329)
T ss_dssp GGEEEEEEEEECSSS--EEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEET------
T ss_pred hhEEEEEEEEecCCe--EEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecC------
Confidence 4799999999998 8 999999999999999999986655445566778999999999999999999999874
Q ss_pred cccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEc-----CCCcEEEE
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT-----QTLDWKLH 171 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~-----~~G~~KL~ 171 (771)
..+||||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++ ..+.+||+
T Consensus 106 --~~~~lv~e~~~~~L~~~~~~~~~---~~~~~~~~i~~ql~~~l~~LH~-~~ivH~Dlkp~NIll~~~~~~~~~~~kl~ 179 (329)
T 3gbz_A 106 --HRLHLIFEYAENDLKKYMDKNPD---VSMRVIKSFLYQLINGVNFCHS-RRCLHRDLKPQNLLLSVSDASETPVLKIG 179 (329)
T ss_dssp --TEEEEEEECCSEEHHHHHHHCTT---CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEEEC-----CCEEEEC
T ss_pred --CEEEEEEecCCCCHHHHHhhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCEECCCCCHHHEEEecCCCCccceEEEC
Confidence 4899999999 689999887643 2344566779999999999997 8999999999999995 45559999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R 247 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~ 247 (771)
|||++......... .....++..|+|||++.+. ..++.++|+|||||++|+|++|.+||..... .
T Consensus 180 Dfg~a~~~~~~~~~------~~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~ 248 (329)
T 3gbz_A 180 DFGLARAFGIPIRQ------FTHEIITLWYRPPEILLGS-----RHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLF 248 (329)
T ss_dssp CTTHHHHHC-----------------CCTTCCHHHHTTC-----CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred cCCCccccCCcccc------cCCCcCCccccCHHHhcCC-----CCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHH
Confidence 99999876532110 1122345689999998763 3467899999999999999999988853211 0
Q ss_pred cc--------------------------------------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 NT--------------------------------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 ~~--------------------------------------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
.+ ..++..+.+++.+||..||.+||++.++++| +||++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h-p~f~~ 324 (329)
T 3gbz_A 249 KIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH-PYFSH 324 (329)
T ss_dssp HHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS-GGGSS
T ss_pred HHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC-cccCC
Confidence 00 0156778899999999999999999999999 56654
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-35 Score=317.78 Aligned_cols=240 Identities=17% Similarity=0.210 Sum_probs=196.7
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch----hHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD----GHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~----~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
..|++++.||.|+ | +||+|+++.+|+.|+||++....... ...+.+.+|+++|+.|+||||++++++++..
T Consensus 11 ~~y~~~~~lG~G~~g--~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-- 86 (326)
T 2y0a_A 11 DYYDTGEELGSGQFA--VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENK-- 86 (326)
T ss_dssp HHEEEEEEEECCSSE--EEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS--
T ss_pred cceEeceEEeeCCCe--EEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeC--
Confidence 3699999999998 8 99999999999999999998654322 2356788999999999999999999999863
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC----c
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL----D 167 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G----~ 167 (771)
..+|+||||| ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+| .
T Consensus 87 ------~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~al~~lH~-~~ivH~Dlkp~NIll~~~~~~~~~ 156 (326)
T 2y0a_A 87 ------TDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLHS-LQIAHFDLKPENIMLLDRNVPKPR 156 (326)
T ss_dssp ------SEEEEEEECCCSCBHHHHHTTSSC---CBHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEESCSSSSSCC
T ss_pred ------CEEEEEEEcCCCCCHHHHHHhcCC---cCHHHHHHHHHHHHHHHHHHHH-CCeEcCCCCHHHEEEecCCCCCCC
Confidence 4899999999 589999875432 3345567779999999999997 8999999999999999888 7
Q ss_pred EEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh
Q 004157 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR 247 (771)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~ 247 (771)
+||+|||++........ .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 157 ~kl~Dfg~a~~~~~~~~-------~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~ 223 (326)
T 2y0a_A 157 IKIIDFGLAHKIDFGNE-------FKNIFGTPEFVAPEIVNY------EPLGLEADMWSIGVITYILLSGASPFLGDTKQ 223 (326)
T ss_dssp EEECCCTTCEECCTTSC-------CCCCCSCTTTCCHHHHTT------CCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH
T ss_pred EEEEECCCCeECCCCCc-------cccccCCcCcCCceeecC------CCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH
Confidence 99999999987653211 112234568999999875 35778999999999999999999988532210
Q ss_pred ----------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 ----------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 ----------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||..+|.+||++.++++| +||+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h-p~~~~ 277 (326)
T 2y0a_A 224 ETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH-PWIKP 277 (326)
T ss_dssp HHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS-TTTSC
T ss_pred HHHHHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC-CCccC
Confidence 013567789999999999999999999999999 55543
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=338.22 Aligned_cols=243 Identities=18% Similarity=0.244 Sum_probs=191.0
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.+|++.+.||.|+ | +||+|.++.+|+.||||++..........+.+.+|+++|+.++||||+++++++.....- .
T Consensus 62 ~~y~~~~~lG~G~~g--~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~--~ 137 (464)
T 3ttj_A 62 KRYQNLKPIGSGAQG--IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL--E 137 (464)
T ss_dssp TTEEEEEEEEECSSC--EEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCST--T
T ss_pred CCeEEEEEeecCCCe--EEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCcc--c
Confidence 4699999999999 9 999999999999999999987644555677888999999999999999999999754210 1
Q ss_pred cccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
....+||||||+ ++|...+... .....+..+++||+.||.|||+ .+|+||||||+||+++.+|.+||+|||++
T Consensus 138 ~~~~~~lv~E~~~~~l~~~~~~~-----l~~~~~~~~~~qil~aL~~lH~-~~iiHrDlkp~NIll~~~~~~kl~DFG~a 211 (464)
T 3ttj_A 138 EFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLA 211 (464)
T ss_dssp TCCEEEEEEECCSEEHHHHHTSC-----CCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEECTTSCEEECCCCCC
T ss_pred cCCeEEEEEeCCCCCHHHHHhhc-----CCHHHHHHHHHHHHHHHHHHHH-CCcccCCCChHhEEEeCCCCEEEEEEEee
Confidence 135789999999 5677776432 2344567779999999999997 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----hc----
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN---- 248 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~~---- 248 (771)
+...... ......++..|+|||++.+ ..++.++|||||||++|||++|.+||...+. ..
T Consensus 212 ~~~~~~~-------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~ 278 (464)
T 3ttj_A 212 RTAGTSF-------MMTPYVVTRYYRAPEVILG------MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 278 (464)
T ss_dssp -----CC-------CC----CCCTTCCHHHHTT------CCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred eecCCCc-------ccCCCcccccccCHHHHcC------CCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 8664321 1222355668999999976 4677899999999999999999999864321 00
Q ss_pred -----------c--------------CC------C---------------CcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 249 -----------T--------------AS------I---------------PKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 249 -----------~--------------~~------I---------------P~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
+ .. + +..+.+++.+||..||.+|||+.++|+| +
T Consensus 279 lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H-p 357 (464)
T 3ttj_A 279 LGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH-P 357 (464)
T ss_dssp HCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS-T
T ss_pred cCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC-h
Confidence 0 00 0 2347889999999999999999999999 5
Q ss_pred CCc
Q 004157 283 YFQ 285 (771)
Q Consensus 283 fF~ 285 (771)
||+
T Consensus 358 ~~~ 360 (464)
T 3ttj_A 358 YIN 360 (464)
T ss_dssp TTG
T ss_pred hhh
Confidence 665
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-35 Score=325.20 Aligned_cols=242 Identities=15% Similarity=0.213 Sum_probs=194.1
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC---chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA---QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~---~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
.|++.+.||.|+ | +||+|+++.+|+.|+||++..... .....+.+++|+++++.|+||||++++++++.+
T Consensus 25 ~y~~~~~lG~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~---- 98 (351)
T 3c0i_A 25 VYELCEVIGKGPFS--VVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSD---- 98 (351)
T ss_dssp HEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEET----
T ss_pred ceEEeeEEeeCCCE--EEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeC----
Confidence 699999999998 8 999999999999999999974311 111356788999999999999999999999874
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCC-CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCc---EE
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD---WK 169 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~---~K 169 (771)
..+||||||| ++|.+.+..... ........+..++.||+.||.|||+ .+++||||||+||+++.++. +|
T Consensus 99 ----~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~-~~ivHrDlkp~NIl~~~~~~~~~vk 173 (351)
T 3c0i_A 99 ----GMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD-NNIIHRDVKPHCVLLASKENSAPVK 173 (351)
T ss_dssp ----TEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEECSSSTTCCEE
T ss_pred ----CEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCChHHeEEecCCCCCcEE
Confidence 4899999999 578887765421 1123345566779999999999997 89999999999999987665 99
Q ss_pred EEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh---
Q 004157 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--- 246 (771)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l--- 246 (771)
|+|||++........ ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||.....
T Consensus 174 l~Dfg~a~~~~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~ 241 (351)
T 3c0i_A 174 LGGFGVAIQLGESGL------VAGGRVGTPHFMAPEVVKR------EPYGKPVDVWGCGVILFILLSGCLPFYGTKERLF 241 (351)
T ss_dssp ECCCTTCEECCTTSC------BCCCCCSCGGGCCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHH
T ss_pred EecCcceeEecCCCe------eecCCcCCcCccCHHHHcC------CCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHH
Confidence 999999987754221 1112244558999999876 3567899999999999999999998854321
Q ss_pred ------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 247 ------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 247 ------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
.....++..+.+++.+||..+|.+||++.++++| +||+
T Consensus 242 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h-p~~~ 291 (351)
T 3c0i_A 242 EGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNH-PWLK 291 (351)
T ss_dssp HHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS-HHHH
T ss_pred HHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC-hhhc
Confidence 0114678889999999999999999999999998 4553
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-35 Score=310.43 Aligned_cols=240 Identities=16% Similarity=0.231 Sum_probs=197.5
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
...+|++.+.||.|+ | +||+|.++.+|+.|+||++..........+.+.+|++++++++||||+++++++..+
T Consensus 4 ~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---- 77 (284)
T 3kk8_A 4 FSDNYDVKEELGKGAFS--VVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEE---- 77 (284)
T ss_dssp TTTTEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECS----
T ss_pred hhhhhhhhhhhcCcCCe--EEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcC----
Confidence 456799999999998 8 999999999999999999987655555677889999999999999999999999863
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCc---EEE
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD---WKL 170 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~---~KL 170 (771)
...|+||||+ ++|.+.+...... ....+..++.||+.||.|||+ .+++||||||+||+++.++. +||
T Consensus 78 ----~~~~~v~e~~~~~~l~~~~~~~~~~---~~~~~~~~~~~i~~~l~~lH~-~~i~H~dikp~Nil~~~~~~~~~~kl 149 (284)
T 3kk8_A 78 ----SFHYLVFDLVTGGELFEDIVAREFY---SEADASHCIQQILESIAYCHS-NGIVHRNLKPENLLLASKAKGAAVKL 149 (284)
T ss_dssp ----SEEEEEECCCCSCBHHHHHHHHSSC---CHHHHHHHHHHHHHHHHHHHH-TTEECSCCCGGGEEESSSSTTCCEEE
T ss_pred ----CEEEEEEecCCCCCHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHH-CCcCcCCCCHHHEEEecCCCCCcEEE
Confidence 4889999999 4788888776432 344466679999999999997 89999999999999987665 999
Q ss_pred EccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh---
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--- 247 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~--- 247 (771)
+|||++........ .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 150 ~Dfg~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~ 216 (284)
T 3kk8_A 150 ADFGLAIEVNDSEA-------WHGFAGTPGYLSPEVLKK------DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLY 216 (284)
T ss_dssp CCCTTCEECCSSCB-------CCCSCSCGGGCCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred eeceeeEEcccCcc-------ccCCCCCcCCcCchhhcC------CCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHH
Confidence 99999977654211 112234558999999876 35678999999999999999999887532211
Q ss_pred -------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 248 -------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 248 -------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
....++..+.+++.+||+.+|.+||++.++++| +||
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h-~~~ 265 (284)
T 3kk8_A 217 AQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV-PWI 265 (284)
T ss_dssp HHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS-HHH
T ss_pred HHHHhccccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC-ccc
Confidence 113567889999999999999999999999998 444
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-35 Score=332.46 Aligned_cols=253 Identities=17% Similarity=0.216 Sum_probs=196.2
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.+|++.+.||.|+ | +||+|+++.+|+.||||++..........+.+.+|+++|+.|+||||+++++++......
T Consensus 26 ~~y~~~~~lG~G~~g--~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~--- 100 (432)
T 3n9x_A 26 DNYIIKHLIGRGSYG--YVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLL--- 100 (432)
T ss_dssp TTEEEEEEEEEETTE--EEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTT---
T ss_pred CCEEEEEEEeecCCE--EEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCC---
Confidence 4799999999998 8 999999999999999999987655555677889999999999999999999999764311
Q ss_pred cccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
....+|||||++ ++|.++++.... .....++.+++||+.||.|||+ .+++||||||+||+|+.+|.+||+|||++
T Consensus 101 ~~~~~~lv~e~~~~~L~~~~~~~~~---l~~~~~~~i~~qil~aL~~LH~-~givHrDlkp~NILl~~~~~~kL~DFGla 176 (432)
T 3n9x_A 101 KFDELYIVLEIADSDLKKLFKTPIF---LTEEHIKTILYNLLLGENFIHE-SGIIHRDLKPANCLLNQDCSVKVCDFGLA 176 (432)
T ss_dssp TCCCEEEEEECCSEEHHHHHHSSCC---CCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred cCCeEEEEEecCCcCHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHH-CCCCCCCCCHHHeEECCCCCEEEccCCCc
Confidence 024799999999 679999876532 2345577779999999999997 89999999999999999999999999999
Q ss_pred cccCCCCCCCC----------C------CccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhC---
Q 004157 177 SEFDGNNEAAN----------G------PMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG--- 237 (771)
Q Consensus 177 ~~~~~~~~~~~----------~------~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g--- 237 (771)
+.......... + ........++..|+|||++... ..++.++|+|||||++|||++|
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~-----~~~~~~~DiwSlG~il~ell~g~~p 251 (432)
T 3n9x_A 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQ-----ENYTKSIDIWSTGCIFAELLNMLQS 251 (432)
T ss_dssp EEC-------------------------------CCCCCTTCCHHHHTTC-----SCCCTHHHHHHHHHHHHHHHTTCTT
T ss_pred ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcC-----CCCCcccccchHHHHHHHHHhcccc
Confidence 87654321100 0 0011234556689999986443 4678899999999999999974
Q ss_pred --------CCCCChhh---------------------h---------------------------------------hcc
Q 004157 238 --------MRLSKTEE---------------------L---------------------------------------RNT 249 (771)
Q Consensus 238 --------~~p~~~~~---------------------l---------------------------------------~~~ 249 (771)
.++|.... + ...
T Consensus 252 ~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (432)
T 3n9x_A 252 HINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKY 331 (432)
T ss_dssp TCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHS
T ss_pred cccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHC
Confidence 44442211 0 001
Q ss_pred CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 250 ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 250 ~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
..++..+.+++.+||..||.+||++.++|+| +||++
T Consensus 332 ~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H-p~f~~ 367 (432)
T 3n9x_A 332 PSISDDGINLLESMLKFNPNKRITIDQALDH-PYLKD 367 (432)
T ss_dssp TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTC-GGGTT
T ss_pred CCCCHHHHHHHHHHhcCCcccCCCHHHHhcC-hhhhh
Confidence 3477889999999999999999999999999 56654
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-35 Score=319.31 Aligned_cols=244 Identities=15% Similarity=0.199 Sum_probs=197.7
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEeccc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENI 93 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~ 93 (771)
.-.+|++.+.||.|+ | +||+|+++.+|+.|+||++.+... .......+.+|.++++++ +||||++++++++++
T Consensus 7 ~~~~y~~~~~lG~G~fg--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~-- 82 (345)
T 3a8x_A 7 GLQDFDLLRVIGRGSYA--KVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE-- 82 (345)
T ss_dssp CGGGEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS--
T ss_pred chhheEEEEEEEecCCe--EEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeC--
Confidence 345699999999998 8 999999999999999999986543 234566788999999988 899999999999864
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEE
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~ 171 (771)
..+||||||| ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+
T Consensus 83 ------~~~~lv~e~~~gg~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~g~~kL~ 152 (345)
T 3a8x_A 83 ------SRLFFVIEYVNGGDLMFHMQRQRK---LPEEHARFYSAEISLALNYLHE-RGIIYRDLKLDNVLLDSEGHIKLT 152 (345)
T ss_dssp ------SEEEEEECCCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHH-TTCBCCCCCGGGEEECTTSCEEEC
T ss_pred ------CEEEEEEeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCceecCCCHHHEEECCCCCEEEE
Confidence 4899999999 479999987643 2344566779999999999997 899999999999999999999999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh-------
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE------- 244 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~------- 244 (771)
|||++........ ......++..|+|||++.+ ..++.++|+|||||++|||++|.+||...
T Consensus 153 DFG~a~~~~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~ 220 (345)
T 3a8x_A 153 DYGMCKEGLRPGD------TTSTFCGTPNYIAPEILRG------EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPD 220 (345)
T ss_dssp CGGGCBCSCCTTC------CBCCCCSCGGGCCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-----
T ss_pred eccccccccCCCC------cccccCCCccccCccccCC------CCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccc
Confidence 9999986433211 1122344568999999876 36778999999999999999999998531
Q ss_pred -----hh-----h----ccCCCCcchHHHHHHHhccCCCCCCCh------HHHhhCCCCCcch
Q 004157 245 -----EL-----R----NTASIPKSLLPDYQRLLSSMPSRRLNS------SKLIENSEYFQNK 287 (771)
Q Consensus 245 -----~l-----~----~~~~IP~~l~~~i~~lL~~~P~~Rps~------~~lL~~~~fF~n~ 287 (771)
.+ . ....++..+.+++.+||..+|.+||++ .++++| +||++.
T Consensus 221 ~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h-p~f~~~ 282 (345)
T 3a8x_A 221 QNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH-PFFRNV 282 (345)
T ss_dssp --CHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS-GGGTTC
T ss_pred cccHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC-CccCCC
Confidence 00 0 113466778999999999999999995 788888 677653
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-35 Score=322.93 Aligned_cols=239 Identities=15% Similarity=0.209 Sum_probs=198.2
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
-.+|++.+.||.|+ | +||+|+++.+|+.|+||++.+.... ....+.+.+|+++|+.++||||+++++++.+.
T Consensus 40 ~~~y~~~~~lG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~---- 113 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFG--RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN---- 113 (350)
T ss_dssp GGGEEEEEEEEECSSC--EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS----
T ss_pred HHHCEEEEEeecCcCc--EEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC----
Confidence 35799999999998 8 9999999999999999999753211 13356788999999999999999999999863
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+||||||| ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+||
T Consensus 114 ----~~~~lv~e~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~g~~kL~DF 185 (350)
T 1rdq_E 114 ----SNLYMVMEYVAGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDF 185 (350)
T ss_dssp ----SEEEEEEECCTTCBHHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEECTTSCEEECCC
T ss_pred ----CEEEEEEcCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCcccccCccceEEECCCCCEEEccc
Confidence 4899999999 589999987643 2344566779999999999997 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------ 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------ 247 (771)
|++...... .....++..|+|||++.+ ..++.++|+|||||++|+|++|.+||......
T Consensus 186 g~a~~~~~~---------~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i 250 (350)
T 1rdq_E 186 GFAKRVKGR---------TWTLCGTPEALAPEIILS------KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250 (350)
T ss_dssp TTCEECSSC---------BCCCEECGGGCCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred ccceeccCC---------cccccCCccccCHHHhcC------CCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHH
Confidence 999876432 112244568999999876 36778999999999999999999998643211
Q ss_pred ------ccCCCCcchHHHHHHHhccCCCCCCC-----hHHHhhCCCCCcc
Q 004157 248 ------NTASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENSEYFQN 286 (771)
Q Consensus 248 ------~~~~IP~~l~~~i~~lL~~~P~~Rps-----~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||..+|.+||+ +.++++| +||.+
T Consensus 251 ~~~~~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h-~~f~~ 299 (350)
T 1rdq_E 251 VSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH-KWFAT 299 (350)
T ss_dssp HHCCCCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS-GGGTT
T ss_pred HcCCCCCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC-cCcCC
Confidence 12456788999999999999999998 8999998 66654
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=326.36 Aligned_cols=243 Identities=16% Similarity=0.204 Sum_probs=194.9
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENID 94 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d 94 (771)
-.+|++.+.||.|+ | +||+|+++.+|+.||||++.+... .....+.+.+|.++|+.+ +||||+++++++++.
T Consensus 22 ~~~y~~~~~lG~G~fg--~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~--- 96 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFG--KVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTP--- 96 (353)
T ss_dssp -CCEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECS---
T ss_pred hhheEEEEEEeeCCCE--EEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeC---
Confidence 35799999999998 8 999999999999999999985321 123456678899999998 699999999999874
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
..+||||||| ++|..++...... ....++.++.||+.||.|||+ .+++||||||+||+++.+|.+||+|
T Consensus 97 -----~~~~lv~E~~~gg~L~~~l~~~~~~---~~~~~~~~~~qi~~aL~~LH~-~givHrDlkp~NILl~~~g~ikL~D 167 (353)
T 3txo_A 97 -----DRLFFVMEFVNGGDLMFHIQKSRRF---DEARARFYAAEIISALMFLHD-KGIIYRDLKLDNVLLDHEGHCKLAD 167 (353)
T ss_dssp -----SEEEEEEECCCSCBHHHHHHHHSSC---CHHHHHHHHHHHHHHHHHHHH-TTCBCCCCCGGGEEECTTSCEEECC
T ss_pred -----CEEEEEEeCCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCCcccCCCHHHEEECCCCCEEEcc
Confidence 4899999999 5799999876432 344466679999999999997 8999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-----
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----- 247 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~----- 247 (771)
||++....... .......++..|+|||++.+. .++.++|+|||||++|||++|.+||......
T Consensus 168 FG~a~~~~~~~------~~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~ 235 (353)
T 3txo_A 168 FGMCKEGICNG------VTTATFCGTPDYIAPEILQEM------LYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEA 235 (353)
T ss_dssp CTTCBCSCC---------------CCGGGCCHHHHHHH------HCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred ccceeecccCC------ccccccCCCcCeEChhhcCCC------CcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 99997543321 112233455689999998763 5678999999999999999999998653321
Q ss_pred -------ccCCCCcchHHHHHHHhccCCCCCCCh------HHHhhCCCCCcch
Q 004157 248 -------NTASIPKSLLPDYQRLLSSMPSRRLNS------SKLIENSEYFQNK 287 (771)
Q Consensus 248 -------~~~~IP~~l~~~i~~lL~~~P~~Rps~------~~lL~~~~fF~n~ 287 (771)
....++..+.+++++||..+|.+|+++ .++++| +||++.
T Consensus 236 i~~~~~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~h-p~f~~~ 287 (353)
T 3txo_A 236 ILNDEVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRH-PFFKEI 287 (353)
T ss_dssp HHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTS-GGGTTC
T ss_pred HHcCCCCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhC-CcccCC
Confidence 113467789999999999999999998 788988 677653
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=312.44 Aligned_cols=240 Identities=20% Similarity=0.178 Sum_probs=189.5
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccCcC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d~~ 96 (771)
.+|++.++||.|+ | +||+|+++.+|+.||||++..............+|+..+..+ +||||++++++++..
T Consensus 57 ~~y~~~~~LG~G~~g--~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~----- 129 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYG--EVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEG----- 129 (311)
T ss_dssp HHEEEEEEEEEETTE--EEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET-----
T ss_pred hheeeeheeccCCCe--EEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeC-----
Confidence 3599999999998 8 999999999999999999876544444444455566655555 899999999999863
Q ss_pred CcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 97 ~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+||||||+ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 130 ---~~~~lv~e~~~~~L~~~~~~~~~~--l~~~~~~~i~~qi~~aL~~LH~-~~ivH~Dikp~NIll~~~~~~kl~DFG~ 203 (311)
T 3p1a_A 130 ---GILYLQTELCGPSLQQHCEAWGAS--LPEAQVWGYLRDTLLALAHLHS-QGLVHLDVKPANIFLGPRGRCKLGDFGL 203 (311)
T ss_dssp ---TEEEEEEECCCCBHHHHHHHHCSC--CCHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEECGGGCEEECCCTT
T ss_pred ---CEEEEEEeccCCCHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHH-CCEecCCCCHHHEEECCCCCEEEcccee
Confidence 4899999999 5788888776421 2344566779999999999997 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCC-Chhhhhc------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLS-KTEELRN------ 248 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~-~~~~l~~------ 248 (771)
+........ .....++..|+|||++.+ .++.++|+|||||++|||++|..++ .......
T Consensus 204 a~~~~~~~~-------~~~~~gt~~y~aPE~~~~-------~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~ 269 (311)
T 3p1a_A 204 LVELGTAGA-------GEVQEGDPRYMAPELLQG-------SYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYL 269 (311)
T ss_dssp CEECC-------------CCCCCGGGCCGGGGGT-------CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHTTTCC
T ss_pred eeecccCCC-------CcccCCCccccCHhHhcC-------CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHhccCC
Confidence 877654211 111234458999999875 3567999999999999999996554 3332211
Q ss_pred ----cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 249 ----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 249 ----~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
...++..+.+++.+||..+|.+||++.++++| +||++
T Consensus 270 ~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h-p~~~~ 310 (311)
T 3p1a_A 270 PPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLAL-PVLRQ 310 (311)
T ss_dssp CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS-GGGSC
T ss_pred CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhC-ccccC
Confidence 24578889999999999999999999999998 56654
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-34 Score=305.79 Aligned_cols=243 Identities=15% Similarity=0.159 Sum_probs=197.6
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
...|++.+.||.|+ | +||+|.++.++..|+||++............+.+|+++++.++||||++++++++....+
T Consensus 25 ~~~~~~~~~lg~G~~g--~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~-- 100 (290)
T 1t4h_A 25 GRFLKFDIEIGRGSFK--TVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKG-- 100 (290)
T ss_dssp SCEEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSS--
T ss_pred ceeEEeeeeccCCCCe--EEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCC--
Confidence 34589999999998 8 999999999999999999987655556677889999999999999999999999764332
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCC--ceecCCCCCCEEEc-CCCcEEEE
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCK--LVHGNVCLSSVVVT-QTLDWKLH 171 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~--ivH~dIkp~NI~v~-~~G~~KL~ 171 (771)
...+|+||||+ ++|.+++...... ....+..++.||+.||.|||+ .+ ++||||||+||+++ .+|.+||+
T Consensus 101 --~~~~~lv~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~qi~~~l~~lH~-~~~~i~H~dikp~Nil~~~~~~~~kl~ 174 (290)
T 1t4h_A 101 --KKCIVLVTELMTSGTLKTYLKRFKVM---KIKVLRSWCRQILKGLQFLHT-RTPPIIHRDLKCDNIFITGPTGSVKIG 174 (290)
T ss_dssp --CEEEEEEEECCCSCBHHHHHHHHSSC---CHHHHHHHHHHHHHHHHHHHT-SSSCCCCSCCCGGGEEESSTTSCEEEC
T ss_pred --CceEEEEEEecCCCCHHHHHHHccCC---CHHHHHHHHHHHHHHHHHHHc-CCCCEEECCCCHHHEEEECCCCCEEEe
Confidence 45899999999 4899999875432 344466679999999999996 77 99999999999998 88999999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-----
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----- 246 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----- 246 (771)
|||++....... .....++..|+|||++.+ .++.++|+|||||++|+|++|..||.....
T Consensus 175 Dfg~~~~~~~~~--------~~~~~~t~~y~aPE~~~~-------~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~ 239 (290)
T 1t4h_A 175 DLGLATLKRASF--------AKAVIGTPEFMAPEMYEE-------KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIY 239 (290)
T ss_dssp CTTGGGGCCTTS--------BEESCSSCCCCCGGGGGT-------CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHH
T ss_pred eCCCcccccccc--------cccccCCcCcCCHHHHhc-------cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHH
Confidence 999997544321 122344568999998764 466899999999999999999988754110
Q ss_pred ----------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 247 ----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 247 ----------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
......+..+.+++.+||..+|.+||++.++++| +||++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h-~~f~~ 288 (290)
T 1t4h_A 240 RRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH-AFFQE 288 (290)
T ss_dssp HHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS-GGGC-
T ss_pred HHHhccCCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC-ccccc
Confidence 0113455679999999999999999999999998 66654
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-34 Score=311.86 Aligned_cols=240 Identities=18% Similarity=0.198 Sum_probs=196.6
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch----hHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD----GHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~----~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
..|++++.||.|+ | +||+|+++.+|+.|+||++....... ...+.+.+|+++++.|+||||++++++++..
T Consensus 12 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-- 87 (321)
T 2a2a_A 12 DFYDIGEELGSGQFA--IVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENR-- 87 (321)
T ss_dssp HHEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS--
T ss_pred ccEEEeeEeeecCCE--EEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecC--
Confidence 3599999999998 8 99999999999999999998654322 1356788999999999999999999999863
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC----c
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL----D 167 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G----~ 167 (771)
..+|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+| .
T Consensus 88 ------~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~aL~~lH~-~~ivH~dikp~NIl~~~~~~~~~~ 157 (321)
T 2a2a_A 88 ------TDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLHT-KKIAHFDLKPENIMLLDKNIPIPH 157 (321)
T ss_dssp ------SEEEEEECCCCSCBHHHHHHTCSC---EEHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEESCTTSSSCC
T ss_pred ------CEEEEEEEcCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeecCCCChHHEEEecCCCCcCC
Confidence 4899999999 589999976432 2345567779999999999997 8999999999999999988 7
Q ss_pred EEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh
Q 004157 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR 247 (771)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~ 247 (771)
+||+|||++........ .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 158 ~kl~Dfg~~~~~~~~~~-------~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~ 224 (321)
T 2a2a_A 158 IKLIDFGLAHEIEDGVE-------FKNIFGTPEFVAPEIVNY------EPLGLEADMWSIGVITYILLSGASPFLGDTKQ 224 (321)
T ss_dssp EEECCCTTCEECCTTCC-------CCCCCSCGGGCCHHHHTT------CCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH
T ss_pred EEEccCccceecCcccc-------ccccCCCCCccCcccccC------CCCCCccccHHHHHHHHHHHHCCCCCCCCCHH
Confidence 99999999987654211 111234458999999876 35678999999999999999999888542210
Q ss_pred ----c------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 ----N------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 ----~------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
. ...++..+.+++.+||..+|.+||++.++++| +||.+
T Consensus 225 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h-p~~~~ 278 (321)
T 2a2a_A 225 ETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH-PWITP 278 (321)
T ss_dssp HHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS-TTTSC
T ss_pred HHHHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC-ccccC
Confidence 0 13567789999999999999999999999999 56654
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-35 Score=318.50 Aligned_cols=238 Identities=17% Similarity=0.236 Sum_probs=195.2
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
..+|++++.||.|+ | +||+|+++.+|+.|++|++.... .....+++|+++++.++||||++++++++..
T Consensus 4 ~~~y~~~~~lG~G~~g--~Vy~~~~~~~~~~~a~K~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~----- 73 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFG--IVHRCVETSSKKTYMAKFVKVKG---TDQVLVKKEISILNIARHRNILHLHESFESM----- 73 (321)
T ss_dssp TTTEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEECCCT---HHHHHHHHHHHHHHHSCCTTBCCEEEEEEET-----
T ss_pred hhceEeeeEEecCCCe--EEEEEEECCCCcEEEEEEEecCc---ccHHHHHHHHHHHHhCCCCCCCeEeEEEecC-----
Confidence 35799999999998 8 99999999999999999997542 3345688999999999999999999999874
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC--CCcEEEEc
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ--TLDWKLHA 172 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~--~G~~KL~d 172 (771)
..+|+||||| ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++. ++.+||+|
T Consensus 74 ---~~~~lv~e~~~g~~L~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~-~givH~Dlkp~NIl~~~~~~~~~kl~D 147 (321)
T 1tki_A 74 ---EELVMIFEFISGLDIFERINTSAF--ELNEREIVSYVHQVCEALQFLHS-HNIGHFDIRPENIIYQTRRSSTIKIIE 147 (321)
T ss_dssp ---TEEEEEECCCCCCBHHHHHTSSSC--CCCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEESSSSCCCEEECC
T ss_pred ---CEEEEEEEeCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH-CCCCcCCCCHHHEEEccCCCCCEEEEE
Confidence 4899999999 479998865431 12344567779999999999997 89999999999999997 79999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-----
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----- 247 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~----- 247 (771)
||++........ .....++..|+|||++.+. .++.++|+|||||++|+|++|.+||......
T Consensus 148 fg~a~~~~~~~~-------~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~ 214 (321)
T 1tki_A 148 FGQARQLKPGDN-------FRLLFTAPEYYAPEVHQHD------VVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIEN 214 (321)
T ss_dssp CTTCEECCTTCE-------EEEEESCGGGSCHHHHTTC------EECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH
T ss_pred CCCCeECCCCCc-------cccccCChhhcCcHHhcCC------CCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHH
Confidence 999987654211 1122345589999998763 4567999999999999999999988543211
Q ss_pred -----------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 -----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 -----------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
....+|..+.+++.+||..+|.+||++.++++| +||.
T Consensus 215 i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h-p~~~ 262 (321)
T 1tki_A 215 IMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQH-PWLK 262 (321)
T ss_dssp HHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS-HHHH
T ss_pred HHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcC-hhhc
Confidence 113678889999999999999999999999999 4554
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-35 Score=325.53 Aligned_cols=243 Identities=15% Similarity=0.208 Sum_probs=195.4
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccCc
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d~ 95 (771)
.+|++.+.||.|+ | +||+|+++.+++.||||++.+..... .....+.+|..+|+++ +||||++++++++++
T Consensus 52 ~~y~~~~~LG~G~fG--~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~---- 125 (396)
T 4dc2_A 52 QDFDLLRVIGRGSYA--KVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE---- 125 (396)
T ss_dssp GGEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECS----
T ss_pred hHcEEEEEEeeCCCe--EEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEEC----
Confidence 4699999999998 8 99999999999999999998643222 3345577899999887 899999999999864
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+||||||| ++|..++...... ....+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+||
T Consensus 126 ----~~~~lV~E~~~gg~L~~~l~~~~~l---~~~~~~~~~~qi~~aL~~LH~-~givHrDLKp~NILl~~~g~ikL~DF 197 (396)
T 4dc2_A 126 ----SRLFFVIEYVNGGDLMFHMQRQRKL---PEEHARFYSAEISLALNYLHE-RGIIYRDLKLDNVLLDSEGHIKLTDY 197 (396)
T ss_dssp ----SEEEEEEECCTTCBHHHHHHHHSSC---CHHHHHHHHHHHHHHHHHHHH-TTCBCCCCCGGGEEECTTSCEEECCC
T ss_pred ----CEEEEEEEcCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCEEeccCCHHHEEECCCCCEEEeec
Confidence 4899999999 5799999876432 344566779999999999997 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh--------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-------- 245 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-------- 245 (771)
|+++....... ......++..|+|||++.+ ..++.++|+|||||++|||++|.+||....
T Consensus 198 Gla~~~~~~~~------~~~~~~gt~~Y~aPE~l~~------~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~ 265 (396)
T 4dc2_A 198 GMCKEGLRPGD------TTSTFCGTPNYIAPEILRG------EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQN 265 (396)
T ss_dssp TTCBCCCCTTC------CBCCCCBCGGGCCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------C
T ss_pred ceeeecccCCC------ccccccCCcccCCchhhcC------CCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchh
Confidence 99975332211 1223345568999999876 467789999999999999999999984210
Q ss_pred ----h---------hccCCCCcchHHHHHHHhccCCCCCCCh------HHHhhCCCCCcchh
Q 004157 246 ----L---------RNTASIPKSLLPDYQRLLSSMPSRRLNS------SKLIENSEYFQNKL 288 (771)
Q Consensus 246 ----l---------~~~~~IP~~l~~~i~~lL~~~P~~Rps~------~~lL~~~~fF~n~l 288 (771)
+ .....++..+.+++++||..+|.+|+++ .++++| +||++.-
T Consensus 266 ~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H-pff~~i~ 326 (396)
T 4dc2_A 266 TEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH-PFFRNVD 326 (396)
T ss_dssp CHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS-TTTTTCC
T ss_pred hHHHHHHHHhccccCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC-ccccCCC
Confidence 0 1113466778999999999999999985 788988 6776643
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-35 Score=319.79 Aligned_cols=241 Identities=17% Similarity=0.260 Sum_probs=187.7
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.||.|+ | +||+|+++.+|+.|+||++....... ....+.+|+++|++++||||++++++++.+
T Consensus 3 ~y~~~~~lG~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------- 72 (324)
T 3mtl_A 3 TYIKLDKLGEGTYA--TVYKGKSKLTDNLVALKEIRLEHEEG-APCTAIREVSLLKDLKHANIVTLHDIIHTE------- 72 (324)
T ss_dssp SEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEECC-------CCCCCCCHHHHSCCCCTTBCCEEEEEECS-------
T ss_pred ceEEEEEEcCCCCE--EEEEEEECCCCcEEEEEEEecccccc-cchhHHHHHHHHHhcCCCCCCeeeeEEeeC-------
Confidence 699999999998 8 99999999999999999997543221 122345799999999999999999999864
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
..+||||||+ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++.
T Consensus 73 -~~~~lv~e~~~~~l~~~~~~~~~~--~~~~~~~~~~~qi~~aL~~LH~-~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~ 148 (324)
T 3mtl_A 73 -KSLTLVFEYLDKDLKQYLDDCGNI--INMHNVKLFLFQLLRGLAYCHR-QKVLHRDLKPQNLLINERGELKLADFGLAR 148 (324)
T ss_dssp -SCEEEEEECCSEEHHHHHHHTTTC--CCHHHHHHHHHHHHHHHHHHHH-TTEEESSCCGGGEEECTTCCEEECSSSEEE
T ss_pred -CEEEEEecccccCHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHH-CCccCCCcCHHHEEECCCCCEEEccCcccc
Confidence 4789999999 6788888775421 2344566779999999999997 899999999999999999999999999997
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh----------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---------- 247 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~---------- 247 (771)
........ .....++..|+|||++.+. ..++.++|+|||||++|+|++|.+||......
T Consensus 149 ~~~~~~~~------~~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~ 217 (324)
T 3mtl_A 149 AKSIPTKT------YDNEVVTLWYRPPDILLGS-----TDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRIL 217 (324)
T ss_dssp CC------------------CGGGCCHHHHTTC-----CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred cccCCccc------cccccCcccccChhhhcCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 65432110 1122345589999998753 35678999999999999999999888542210
Q ss_pred --------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 --------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 --------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||..||.+||++.++++| +||.+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h-p~f~~ 287 (324)
T 3mtl_A 218 GTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH-PFFLS 287 (324)
T ss_dssp CCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS-GGGGG
T ss_pred CCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC-hhhhh
Confidence 012456778999999999999999999999999 55543
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-35 Score=306.66 Aligned_cols=241 Identities=13% Similarity=0.135 Sum_probs=192.3
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccCcC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d~~ 96 (771)
.+|++.+.||.|+ | +||+|+++.+++.|+||++............+.+|+..+..+ +||||+++++++..+
T Consensus 11 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~----- 83 (289)
T 1x8b_A 11 TEFHELEKIGSGEFG--SVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAED----- 83 (289)
T ss_dssp HHEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEET-----
T ss_pred chhhhhhhhcCCCce--EEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecC-----
Confidence 3699999999998 8 999999999999999999987655555566788899999999 899999999999864
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCC-CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC-------
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL------- 166 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G------- 166 (771)
..+||||||+ ++|.+++..... ........+..++.||+.||.|||+ .+++||||||+||+++.+|
T Consensus 84 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~-~~ivH~Dikp~NIl~~~~~~~~~~~~ 159 (289)
T 1x8b_A 84 ---DHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS-MSLVHMDIKPSNIFISRTSIPNAASE 159 (289)
T ss_dssp ---TEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEEC----------
T ss_pred ---CeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHh-CCEeecCCCHHHEEEcCCCCCccccc
Confidence 4899999999 489999976421 1122345567779999999999997 8999999999999998554
Q ss_pred ------------cEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHH
Q 004157 167 ------------DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYEL 234 (771)
Q Consensus 167 ------------~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el 234 (771)
.+||+|||++........ ..++..|+|||++.+. ..++.++|+|||||++|+|
T Consensus 160 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~----------~~gt~~y~aPE~~~~~-----~~~~~~~Di~slG~il~~l 224 (289)
T 1x8b_A 160 EGDEDDWASNKVMFKIGDLGHVTRISSPQV----------EEGDSRFLANEVLQEN-----YTHLPKADIFALALTVVCA 224 (289)
T ss_dssp ----------CCCEEECCCTTCEETTCSCC----------CCCCGGGCCHHHHTTC-----CTTHHHHHHHHHHHHHHHH
T ss_pred ccccccccCCceEEEEcccccccccCCccc----------cCCCccccChhHhcCC-----CCCCchhhHHHHHHHHHHH
Confidence 799999999987654211 1244589999998753 2344689999999999999
Q ss_pred hhCCCCCChhhh-h---------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 235 FSGMRLSKTEEL-R---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 235 ~~g~~p~~~~~l-~---------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
++|.+++..... . ....++..+.+++.+||..+|.+||++.++++| +||.+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h-~~~~~ 285 (289)
T 1x8b_A 225 AGAEPLPRNGDQWHEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH-SVLLS 285 (289)
T ss_dssp TTCCCCCSSSHHHHHHHTTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC-TTC--
T ss_pred hcCCCCCcchhHHHHHHcCCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC-hHhhh
Confidence 999876643221 1 113567889999999999999999999999999 55543
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-35 Score=321.79 Aligned_cols=245 Identities=15% Similarity=0.186 Sum_probs=196.6
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecc
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVEN 92 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~ 92 (771)
+.-..|++.+.||.|+ | +||+|+++.+|+.||||++.+... .+.....+.+|.++|+.+ +||||+++++++++.
T Consensus 14 ~~~~~y~~~~~lG~G~fg--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~- 90 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFG--KVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTK- 90 (345)
T ss_dssp --CTTEEEEEEEEECSSS--EEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECS-
T ss_pred CChHHeEEEEEEeeCCCe--EEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeC-
Confidence 3456799999999998 9 999999999999999999985321 112345677899999877 899999999999863
Q ss_pred cCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEE
Q 004157 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL 170 (771)
..+||||||| ++|.+++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||
T Consensus 91 -------~~~~lv~E~~~gg~L~~~l~~~~~~---~~~~~~~~~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~g~vkL 159 (345)
T 1xjd_A 91 -------ENLFFVMEYLNGGDLMYHIQSCHKF---DLSRATFYAAEIILGLQFLHS-KGIVYRDLKLDNILLDKDGHIKI 159 (345)
T ss_dssp -------SEEEEEEECCTTCBHHHHHHHHSSC---CHHHHHHHHHHHHHHHHHHHH-TTCBCCCCCGGGEEECTTSCEEE
T ss_pred -------CEEEEEEeCCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeEeCCCChhhEEECCCCCEEE
Confidence 4899999999 5899999875432 334466679999999999997 89999999999999999999999
Q ss_pred EccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh---
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--- 247 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~--- 247 (771)
+|||++........ ......++..|+|||++.+ ..++.++|+|||||++|||++|.+||......
T Consensus 160 ~DFG~a~~~~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~ 227 (345)
T 1xjd_A 160 ADFGMCKENMLGDA------KTNTFCGTPDYIAPEILLG------QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELF 227 (345)
T ss_dssp CCCTTCBCCCCTTC------CBCCCCSCGGGCCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred eEChhhhhcccCCC------cccCCCCCcccCChhhhcC------CCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHH
Confidence 99999976432211 1122344558999999876 35778999999999999999999998643211
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCCCCChH-HHhhCCCCCcch
Q 004157 248 ---------NTASIPKSLLPDYQRLLSSMPSRRLNSS-KLIENSEYFQNK 287 (771)
Q Consensus 248 ---------~~~~IP~~l~~~i~~lL~~~P~~Rps~~-~lL~~~~fF~n~ 287 (771)
....++..+.+++.+||..+|.+||++. ++++| +||++.
T Consensus 228 ~~i~~~~~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~h-p~f~~~ 276 (345)
T 1xjd_A 228 HSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQH-PLFREI 276 (345)
T ss_dssp HHHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGS-GGGTTC
T ss_pred HHHHhCCCCCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHcC-ccccCC
Confidence 1134677899999999999999999998 88888 677653
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-35 Score=320.04 Aligned_cols=244 Identities=20% Similarity=0.264 Sum_probs=187.0
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch---hHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD---GHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~---~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
..+|++.+.||.|+ | +||+|+++.+|+.|+||++....... .....+.+|+++++.|+||||++++++++..
T Consensus 9 ~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-- 84 (346)
T 1ua2_A 9 AKRYEKLDFLGEGQFA--TVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHK-- 84 (346)
T ss_dssp ----CEEEEEEEETTE--EEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCT--
T ss_pred hcccEEEeEEeecCCE--EEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeC--
Confidence 45799999999998 8 99999999999999999997533221 2234677899999999999999999999763
Q ss_pred CcCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 94 DATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
..+|+||||+ ++|..++...... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|
T Consensus 85 ------~~~~lv~e~~~~~l~~~~~~~~~~--~~~~~~~~~~~qi~~~l~~lH~-~~ivH~Dlkp~Nil~~~~~~~kl~D 155 (346)
T 1ua2_A 85 ------SNISLVFDFMETDLEVIIKDNSLV--LTPSHIKAYMLMTLQGLEYLHQ-HWILHRDLKPNNLLLDENGVLKLAD 155 (346)
T ss_dssp ------TCCEEEEECCSEEHHHHHTTCCSS--CCSSHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEECTTCCEEECC
T ss_pred ------CceEEEEEcCCCCHHHHHHhcCcC--CCHHHHHHHHHHHHHHHHHHHH-CCEECCCCCHHHEEEcCCCCEEEEe
Confidence 3789999999 6788888764321 1122355669999999999997 8999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h-
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R- 247 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~- 247 (771)
||++......... .....++..|+|||++.+. ..++.++|+|||||++|+|++|.++|..... .
T Consensus 156 fg~a~~~~~~~~~------~~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~ 224 (346)
T 1ua2_A 156 FGLAKSFGSPNRA------YTHQVVTRWYRAPELLFGA-----RMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTR 224 (346)
T ss_dssp CGGGSTTTSCCCC------CCCSCCCCTTCCHHHHTTC-----SCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred cccceeccCCccc------CCcccccccccCchHhhCC-----CCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence 9999876542211 1122345689999998653 3467899999999999999999988753210 0
Q ss_pred --------------c---------------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 --------------N---------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 --------------~---------------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
. ...++..+.+++.+||..+|.+||++.++++| +||.+
T Consensus 225 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h-~~f~~ 297 (346)
T 1ua2_A 225 IFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM-KYFSN 297 (346)
T ss_dssp HHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS-GGGTS
T ss_pred HHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC-hhhhc
Confidence 0 02345678999999999999999999999999 55543
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-35 Score=320.88 Aligned_cols=244 Identities=14% Similarity=0.169 Sum_probs=192.3
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
..+|++.+.||.|+ | +||+|+++.+++.|+||++...... ...+.+++|+.+++.++||||++++++++..
T Consensus 6 ~~~y~i~~~lG~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~----- 77 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYG--EVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFYGHRREG----- 77 (323)
T ss_dssp TTCEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHHCCCTTBCCEEEEEECS-----
T ss_pred hhhceeeeEEecCCCE--EEEEEEECCCCcEEEEEEEEccccc-chHHHHHHHHHHHHhCCCCCCCeEEEEEecC-----
Confidence 34799999999998 8 9999999999999999999865332 2345678999999999999999999999863
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+||||||| ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 78 ---~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~aL~~LH~-~givH~Dlkp~NIll~~~~~~kl~Dfg 150 (323)
T 3tki_A 78 ---NIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMAGVVYLHG-IGITHRDIKPENLLLDERDNLKISDFG 150 (323)
T ss_dssp ---SEEEEEEECCTTEEGGGGSBTTTB---CCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEECTTCCEEECCCT
T ss_pred ---CeEEEEEEcCCCCcHHHHHhhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCccccccchHHEEEeCCCCEEEEEee
Confidence 4899999999 478887765432 2344566779999999999997 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh--------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------- 246 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-------- 246 (771)
++..+....... ......++..|+|||++.+. ..++.++|+|||||++|+|++|..||.....
T Consensus 151 ~a~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~-----~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~ 221 (323)
T 3tki_A 151 LATVFRYNNRER----LLNKMCGTLPYVAPELLKRR-----EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221 (323)
T ss_dssp TCEECEETTEEC----CBCSCCSCGGGSCHHHHHCS-----SBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHH
T ss_pred ccceeccCCccc----ccCCCccCcCccCcHHhccC-----CCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHH
Confidence 997654321100 01122345589999998753 2235689999999999999999998853221
Q ss_pred -------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 247 -------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 247 -------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
.....++..+.+++.+||..+|.+||++.++++| +||++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h-~~~~~ 267 (323)
T 3tki_A 222 KEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD-RWYNK 267 (323)
T ss_dssp HTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC-TTTTC
T ss_pred hcccccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhC-hhhcc
Confidence 1114577889999999999999999999999998 56654
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=318.93 Aligned_cols=249 Identities=18% Similarity=0.275 Sum_probs=198.4
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
-+|++.+.||.|+ | +||+|+++.++..|+||++.... .......+.+|+++|++|+||||+++++++......
T Consensus 27 ~~y~~~~~lG~G~~g--~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~--- 100 (364)
T 3qyz_A 27 PRYTNLSYIGEGAYG--MVCSAYDNLNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIE--- 100 (364)
T ss_dssp TTEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEECCTT-CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTT---
T ss_pred ccEEEEEEeecCCCe--EEEEEEECCCCeEEEEEEecccc-CcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCcc---
Confidence 4799999999998 8 99999999999999999997533 334557788999999999999999999999754311
Q ss_pred cccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
....+|||||++ ++|.++++...+ ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 101 ~~~~~~iv~e~~~~~L~~~l~~~~~----~~~~~~~i~~qi~~aL~~LH~-~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a 175 (364)
T 3qyz_A 101 QMKDVYIVQDLMETDLYKLLKTQHL----SNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCDLKICDFGLA 175 (364)
T ss_dssp TCCCEEEEEECCSEEHHHHHHHCCC----CHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred ccceEEEEEcccCcCHHHHHHhCCC----CHHHHHHHHHHHHHHHHHHHH-CCeecCCCChHhEEECCCCCEEEEeCcce
Confidence 134789999999 679998887543 344566779999999999997 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh---------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--------- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~--------- 247 (771)
........... ......++..|+|||++.+. ..++.++|+|||||++|+|++|.+||......
T Consensus 176 ~~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~-----~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~ 247 (364)
T 3qyz_A 176 RVADPDHDHTG---FLTEYVATRWYRAPEIMLNS-----KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 247 (364)
T ss_dssp EECCGGGCBCC---TTCCCCSCGGGCCHHHHHTB-----CSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHH
T ss_pred EecCCCCCccc---cccccccccCCCCCHHhcCC-----CCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHH
Confidence 87653211100 01122445589999987653 35678999999999999999999988542110
Q ss_pred ----------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcch
Q 004157 248 ----------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNK 287 (771)
Q Consensus 248 ----------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n~ 287 (771)
....++..+.+++.+||..||.+||++.++++| +||+..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h-p~~~~~ 320 (364)
T 3qyz_A 248 LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH-PYLEQY 320 (364)
T ss_dssp HCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS-GGGTTT
T ss_pred hCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC-cchhhc
Confidence 013467789999999999999999999999998 566543
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-34 Score=308.72 Aligned_cols=252 Identities=17% Similarity=0.157 Sum_probs=189.5
Q ss_pred CCCCceec-CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEeccc
Q 004157 17 KDLPYNIG-DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENI 93 (771)
Q Consensus 17 ~~~~Y~i~-e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~ 93 (771)
....|++. +.||.|+ | +||+|+++.+|+.|+||++..... .....+.+|+++|+++ +||||++++++++.+
T Consensus 10 ~~~~y~i~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~-- 83 (316)
T 2ac3_A 10 FEDVYQLQEDVLGEGAHA--RVQTCINLITSQEYAVKIIEKQPG--HIRSRVFREVEMLYQCQGHRNVLELIEFFEEE-- 83 (316)
T ss_dssp TTTSCEECCCCCCCCSSE--EEEEEECSSSCCEEEEEEEECCSS--CCHHHHHHHHHHHHHTCCCTTBCCEEEEEEET--
T ss_pred cceeEEecCceecCCceE--EEEEEEEcCCCcEEEEEEEeeCcc--hhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeC--
Confidence 45679995 7899998 7 999999999999999999986532 2355788999999985 799999999999874
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCc---E
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD---W 168 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~---~ 168 (771)
..+||||||+ ++|.+++...... ....+..++.||+.||.|||+ .+++||||||+||+++.++. +
T Consensus 84 ------~~~~lv~e~~~~~~L~~~l~~~~~~---~~~~~~~i~~qi~~~l~~lH~-~~ivH~dlkp~Nil~~~~~~~~~~ 153 (316)
T 2ac3_A 84 ------DRFYLVFEKMRGGSILSHIHKRRHF---NELEASVVVQDVASALDFLHN-KGIAHRDLKPENILCEHPNQVSPV 153 (316)
T ss_dssp ------TEEEEEEECCTTCBHHHHHHHHSSC---CHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEESCSSSSCSE
T ss_pred ------CEEEEEEEcCCCCcHHHHHhccCCC---CHHHHHHHHHHHHHHHHHHHh-CCceeCCCCHHHEEEccCCCcCce
Confidence 4899999999 5899999876432 344466779999999999997 89999999999999998876 9
Q ss_pred EEEccCcccccCCCCCCCCCC-ccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh--
Q 004157 169 KLHAFDVLSEFDGNNEAANGP-MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-- 245 (771)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~-~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-- 245 (771)
||+|||++............. .......++..|+|||++.+.... ...++.++|+|||||++|+|++|..||....
T Consensus 154 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~ 232 (316)
T 2ac3_A 154 KICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEE-ASIYDKRCDLWSLGVILYILLSGYPPFVGRCGS 232 (316)
T ss_dssp EECCTTCCC-------------------CCSGGGCCHHHHHHTSHH-HHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCS
T ss_pred EEEEccCccccccCCccccccccccccccCCcCccChHHhhccccc-ccCCCcccccHhHHHHHHHHHHCCCCCcccccc
Confidence 999999987664321110000 001112344589999998641000 0134578999999999999999999885321
Q ss_pred ----------------h-h------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 246 ----------------L-R------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 246 ----------------l-~------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
+ . ....++..+.+++.+||..||.+||++.++++| +||++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h-p~~~~ 301 (316)
T 2ac3_A 233 DCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH-PWVQG 301 (316)
T ss_dssp CSCC----CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS-TTCC-
T ss_pred cccccccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC-hhhcC
Confidence 0 0 013567789999999999999999999999999 56654
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-35 Score=315.70 Aligned_cols=240 Identities=20% Similarity=0.249 Sum_probs=190.6
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.||.|+ | +||+|+++.+|+.|+||++..........+.+.+|+++++.++||||++++++++..
T Consensus 26 ~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------- 96 (331)
T 4aaa_A 26 KYENLGLVGEGSYG--MVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKK------- 96 (331)
T ss_dssp GEEEEEEGGGGTTS--SEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET-------
T ss_pred hheeeeEEeecCCE--EEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecC-------
Confidence 699999999998 8 899999999999999999987665556667788999999999999999999999863
Q ss_pred ccEEEEEecCCc--chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+||||||+. .|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 97 -~~~~lv~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~qi~~~l~~LH~-~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 171 (331)
T 4aaa_A 97 -KRWYLVFEFVDHTILDDLELFPNG---LDYQVVQKYLFQIINGIGFCHS-HNIIHRDIKPENILVSQSGVVKLCDFGFA 171 (331)
T ss_dssp -TEEEEEEECCSEEHHHHHHHSTTC---CCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred -CEEEEEEecCCcchHHHHHhhccC---CCHHHHHHHHHHHHHHHHHHHH-CCEEccCcChheEEEcCCCcEEEEeCCCc
Confidence 48999999993 45555443322 2344566779999999999997 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh---------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--------- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~--------- 247 (771)
......... .....++..|+|||++.+. ..++.++|+|||||++|+|++|.+||......
T Consensus 172 ~~~~~~~~~------~~~~~~t~~y~aPE~~~~~-----~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 240 (331)
T 4aaa_A 172 RTLAAPGEV------YDDEVATRWYRAPELLVGD-----VKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMC 240 (331)
T ss_dssp ------------------CCCCCTTCCHHHHTTC-----TTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred eeecCCccc------cCCCcCCccccCcccccCC-----CCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHH
Confidence 766442111 1122345589999998753 35678999999999999999999888532210
Q ss_pred ----------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 ----------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 ----------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
....++..+.+++.+||..+|.+||++.++|+| +||+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h-p~f~ 311 (331)
T 4aaa_A 241 LGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH-DFFQ 311 (331)
T ss_dssp HCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS-HHHH
T ss_pred hCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC-chhc
Confidence 012567889999999999999999999999998 5554
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-34 Score=310.56 Aligned_cols=238 Identities=17% Similarity=0.229 Sum_probs=193.9
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
..|+..++||.|+ | +||+|+++.+|+.|+||++...... ..+.+.+|+++++.++||||+++++++...
T Consensus 45 ~~~~~~~~lg~G~~g--~V~~a~~~~~g~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------ 114 (321)
T 2c30_A 45 LLLDSYVKIGEGSTG--IVCLAREKHSGRQVAVKMMDLRKQQ--RRELLFNEVVIMRDYQHFNVVEMYKSYLVG------ 114 (321)
T ss_dssp HHEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEETTTCC--SHHHHHHHHHHHTTCCCTTBCCEEEEEEET------
T ss_pred hhhhccEEeccCCCe--EEEEEEECCCCcEEEEEEEeccchh--HHHHHHHHHHHHHhCCCCCcceEEEEEEEC------
Confidence 4588888999998 8 9999999999999999999865332 356688999999999999999999999874
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+|+||||+ ++|.+++....+ ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 115 --~~~~lv~e~~~~~~L~~~l~~~~l----~~~~~~~i~~qi~~~L~~LH~-~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 187 (321)
T 2c30_A 115 --EELWVLMEFLQGGALTDIVSQVRL----NEEQIATVCEAVLQALAYLHA-QGVIHRDIKSDSILLTLDGRVKLSDFGF 187 (321)
T ss_dssp --TEEEEEECCCCSCBHHHHHTTCCC----CHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEECTTCCEEECCCTT
T ss_pred --CEEEEEEecCCCCCHHHHHHhcCC----CHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECCCCcEEEeeeee
Confidence 4899999999 579888875432 344566779999999999997 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh---------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--------- 246 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l--------- 246 (771)
+......... .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||.....
T Consensus 188 ~~~~~~~~~~------~~~~~gt~~y~aPE~~~~------~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~ 255 (321)
T 2c30_A 188 CAQISKDVPK------RKSLVGTPYWMAPEVISR------SLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRD 255 (321)
T ss_dssp CEECCSSSCC------BCCCCSCGGGCCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH
T ss_pred eeecccCccc------cccccCCccccCHhhhcC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Confidence 9876542111 112234558999999876 3567899999999999999999988854321
Q ss_pred ------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 247 ------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 247 ------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
.....++..+.+++.+||..+|.+||++.++++|++|.+
T Consensus 256 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~ 300 (321)
T 2c30_A 256 SPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQ 300 (321)
T ss_dssp SSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGG
T ss_pred CCCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcc
Confidence 111346778999999999999999999999999954433
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-35 Score=322.68 Aligned_cols=248 Identities=14% Similarity=0.219 Sum_probs=198.1
Q ss_pred CCCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecc
Q 004157 15 GVKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (771)
Q Consensus 15 ~~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~ 92 (771)
.+.-..|++.+.||.|+ | +||.|.++.+|+.||||++.+... .......+.+|+++|+.++||||+++++++.+.
T Consensus 11 ~v~~~~y~i~~~LG~G~fG--~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~- 87 (384)
T 4fr4_A 11 DVNFDHFEILRAIGKGSFG--KVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDE- 87 (384)
T ss_dssp CCCGGGEEEEEEEECCTTC--CEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS-
T ss_pred CCChHHeEEEEEEeeCCCe--EEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeC-
Confidence 34445799999999999 8 999999999999999999975321 112356788999999999999999999999864
Q ss_pred cCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEE
Q 004157 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL 170 (771)
..+|+||||| ++|..++..... .....+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||
T Consensus 88 -------~~~~lv~e~~~gg~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~~LH~-~givHrDlkp~NIll~~~g~vkL 156 (384)
T 4fr4_A 88 -------EDMFMVVDLLLGGDLRYHLQQNVH---FKEETVKLFICELVMALDYLQN-QRIIHRDMKPDNILLDEHGHVHI 156 (384)
T ss_dssp -------SEEEEEECCCTTEEHHHHHHTTCC---CCHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEECTTSCEEE
T ss_pred -------CEEEEEEecCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCceeccCcHHHeEECCCCCEEE
Confidence 4899999999 579999987543 2344566779999999999997 89999999999999999999999
Q ss_pred EccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL---- 246 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l---- 246 (771)
+|||++........ .....++..|+|||++.+.. ...++.++|+|||||++|+|++|..||.....
T Consensus 157 ~DFG~a~~~~~~~~-------~~~~~gt~~Y~aPE~~~~~~---~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~ 226 (384)
T 4fr4_A 157 TDFNIAAMLPRETQ-------ITTMAGTKPYMAPEMFSSRK---GAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSK 226 (384)
T ss_dssp CCCTTCEECCTTCC-------BCCCCSCGGGCCGGGTCCCS---SCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHH
T ss_pred eccceeeeccCCCc-------eeccCCCccccCCeeeccCC---CCCCCccceeechHHHHHHHHhCCCCCCCCCCccHH
Confidence 99999987653211 12234455899999986420 13467899999999999999999998853210
Q ss_pred -----------hccCCCCcchHHHHHHHhccCCCCCCC-hHHHhhCCCCCcch
Q 004157 247 -----------RNTASIPKSLLPDYQRLLSSMPSRRLN-SSKLIENSEYFQNK 287 (771)
Q Consensus 247 -----------~~~~~IP~~l~~~i~~lL~~~P~~Rps-~~~lL~~~~fF~n~ 287 (771)
.....++..+.+++.+||+.+|.+||+ +.++++| +||++.
T Consensus 227 ~~~~~~~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~h-p~f~~~ 278 (384)
T 4fr4_A 227 EIVHTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNF-PYMNDI 278 (384)
T ss_dssp HHHHHHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTS-GGGTTC
T ss_pred HHHHHHhhcccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcC-hhhhcC
Confidence 112356778999999999999999998 7777776 777664
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-34 Score=306.38 Aligned_cols=240 Identities=19% Similarity=0.285 Sum_probs=190.1
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
..|++.+.||.|+ | +||+|+++.++..|+||++...... ...+.+.+|+++|++++||||++++++++..
T Consensus 22 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~------ 92 (285)
T 3is5_A 22 DLFIFKRKLGSGAFG--DVHLVEERSSGLERVIKTINKDRSQ-VPMEQIEAEIEVLKSLDHPNIIKIFEVFEDY------ 92 (285)
T ss_dssp HHEEEEEEEEECSSC--EEEEEEETTTCCEEEEEEEEGGGCC-SCHHHHHHHHHHHHTCCCTTBCCEEEEEECS------
T ss_pred hheeecceeccCCCe--EEEEEEEccCCceEEEEEeeccccc-hhHHHHHHHHHHHHhCCCchHHhHHHheecC------
Confidence 3699999999998 8 9999999999999999999864322 2356788999999999999999999999863
Q ss_pred cccEEEEEecCC--cchHHHHHHhC-CCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEE---cCCCcEEEE
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELG-LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV---TQTLDWKLH 171 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~-~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v---~~~G~~KL~ 171 (771)
..+|+||||+ ++|.+++.... .........+..++.||+.||.|||+ .+++||||||+||++ +.++.+||+
T Consensus 93 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~-~~ivH~dikp~NIl~~~~~~~~~~kl~ 169 (285)
T 3is5_A 93 --HNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS-QHVVHKDLKPENILFQDTSPHSPIKII 169 (285)
T ss_dssp --SEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCSGGGEEESSSSTTCCEEEC
T ss_pred --CeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHh-CCEEECCCCHHHEEEecCCCCCCEEEE
Confidence 4899999999 47888886532 11223345567779999999999997 899999999999999 556889999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh----
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---- 247 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~---- 247 (771)
|||++........ .....++..|+|||++.+ .++.++|+|||||++|+|++|..||......
T Consensus 170 Dfg~a~~~~~~~~-------~~~~~~t~~y~aPE~~~~-------~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~ 235 (285)
T 3is5_A 170 DFGLAELFKSDEH-------STNAAGTALYMAPEVFKR-------DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQ 235 (285)
T ss_dssp CCCCCCC-----------------CTTGGGCCHHHHTT-------CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred eeecceecCCccc-------CcCcccccCcCChHHhcc-------CCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHh
Confidence 9999976544211 112234458999999764 4567999999999999999999988643211
Q ss_pred -----------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 -----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 -----------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
....++..+.+++.+||..+|.+||++.++++| +||+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h-p~f~ 283 (285)
T 3is5_A 236 KATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH-EWFK 283 (285)
T ss_dssp HHHHCCCCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS-GGGG
T ss_pred hhccCCcccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhcC-HHhh
Confidence 113467889999999999999999999999998 5664
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-35 Score=340.91 Aligned_cols=244 Identities=15% Similarity=0.195 Sum_probs=198.3
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
....|++.+.||.|+ | +||+|+++.+|+.||||++.+.... ......+.+|+++|+.++||||+++++++++.
T Consensus 182 ~~~~f~~~~~LG~G~fG--~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~--- 256 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFG--EVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETK--- 256 (576)
T ss_dssp CGGGEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECS---
T ss_pred cccceEEEEEEeeCCCE--EEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeC---
Confidence 345699999999998 8 9999999999999999999753211 12345678999999999999999999999863
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
..+||||||| ++|..++....... .....+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+|
T Consensus 257 -----~~l~lVmEy~~gg~L~~~l~~~~~~~-l~e~~~~~i~~qIl~aL~yLH~-~gIvHrDLKPeNILld~~g~vKL~D 329 (576)
T 2acx_A 257 -----DALCLVLTLMNGGDLKFHIYHMGQAG-FPEARAVFYAAEICCGLEDLHR-ERIVYRDLKPENILLDDHGHIRISD 329 (576)
T ss_dssp -----SEEEEEECCCCSCBHHHHHHSSSSCC-CCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEECTTSCEEECC
T ss_pred -----CEEEEEEEcCCCCcHHHHHHhcCCCC-CCHHHHHHHHHHHHHHHHHHHH-CCEeccCCchheEEEeCCCCeEEEe
Confidence 4899999999 58999988654221 2344566779999999999997 8999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-------
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE------- 245 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~------- 245 (771)
||++........ .....++..|+|||++.+ ..++.++|+|||||++|||++|.+||....
T Consensus 330 FGla~~~~~~~~-------~~~~~GT~~Y~APEvl~~------~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~ 396 (576)
T 2acx_A 330 LGLAVHVPEGQT-------IKGRVGTVGYMAPEVVKN------ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREE 396 (576)
T ss_dssp CTTCEECCTTCC-------EECCCSCGGGCCHHHHTT------CEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHH
T ss_pred cccceecccCcc-------ccccCCCccccCHHHHcC------CCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHH
Confidence 999987654211 122345568999999876 356789999999999999999999986431
Q ss_pred hh---------ccCCCCcchHHHHHHHhccCCCCCC-----ChHHHhhCCCCCcc
Q 004157 246 LR---------NTASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENSEYFQN 286 (771)
Q Consensus 246 l~---------~~~~IP~~l~~~i~~lL~~~P~~Rp-----s~~~lL~~~~fF~n 286 (771)
+. ....++..+.+++.+||..+|.+|+ ++.++++| +||++
T Consensus 397 i~~~i~~~~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H-pfF~~ 450 (576)
T 2acx_A 397 VERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH-PLFKK 450 (576)
T ss_dssp HHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS-GGGTT
T ss_pred HHHHhhcccccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC-hhhcc
Confidence 10 1134677899999999999999999 78999998 67765
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-35 Score=314.23 Aligned_cols=241 Identities=15% Similarity=0.179 Sum_probs=188.0
Q ss_pred CCCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 15 GVKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 15 ~~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
.+...+|++.+.||.|+ | +||+|++ +|+.|+||++............+.+|+++|++|+||||++++++++..
T Consensus 33 ~i~~~~y~i~~~lG~G~~g--~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-- 106 (309)
T 3p86_A 33 DIPWCDLNIKEKIGAGSFG--TVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQP-- 106 (309)
T ss_dssp BCCGGGEEEEEEEEECSSE--EEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST--
T ss_pred cCChhHceeeeEeecCCCe--EEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC--
Confidence 45566899999999998 8 9999987 588999999987665556677889999999999999999999999764
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCC--ceecCCCCCCEEEcCCCcEE
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCK--LVHGNVCLSSVVVTQTLDWK 169 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~--ivH~dIkp~NI~v~~~G~~K 169 (771)
..+||||||+ ++|.+++.............+..++.||+.||.|||+ .+ ++||||||+||+++.+|.+|
T Consensus 107 ------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~~~ivH~Dikp~NIll~~~~~~k 179 (309)
T 3p86_A 107 ------PNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN-RNPPIVHRNLKSPNLLVDKKYTVK 179 (309)
T ss_dssp ------TCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHT-SSSCCCCTTCCGGGEEECTTCCEE
T ss_pred ------CceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCCEECCCCChhhEEEeCCCcEE
Confidence 3789999999 4899999865421112334456679999999999996 88 99999999999999999999
Q ss_pred EEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh---
Q 004157 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--- 246 (771)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l--- 246 (771)
|+|||++....... .......++..|+|||++.+ ..++.++|+|||||++|+|++|..||.....
T Consensus 180 L~Dfg~a~~~~~~~------~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~ 247 (309)
T 3p86_A 180 VCDFGLSRLKASTF------LSSKSAAGTPEWMAPEVLRD------EPSNEKSDVYSFGVILWELATLQQPWGNLNPAQV 247 (309)
T ss_dssp ECCCC-----------------------CCTTSCHHHHTT------CCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHH
T ss_pred ECCCCCCccccccc------cccccCCCCccccChhhhcC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 99999987544321 11122344568999999876 3567899999999999999999998864321
Q ss_pred -----------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 -----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 -----------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....++..+.+++.+||..+|.+||++.++++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~ 292 (309)
T 3p86_A 248 VAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDL 292 (309)
T ss_dssp HHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 1124567789999999999999999999998763
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-35 Score=319.66 Aligned_cols=237 Identities=17% Similarity=0.195 Sum_probs=185.3
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
..+|++.+.||.|+ | +||+++++.+|+.||||++...... .+.+++|+..++.|+||||+++++++...
T Consensus 19 ~~~y~~~~~lG~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~~~~~~~~~----- 88 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFG--VARLMRDKLTKELVAVKYIERGAAI---DENVQREIINHRSLRHPNIVRFKEVILTP----- 88 (361)
T ss_dssp TTTEEEEEEESSSTTS--SEEEEEETTTCCEEEEEEEESSTTS---CHHHHHHHHHHHHCCCTTBCCEEEEEECS-----
T ss_pred CCcEEEEEEeccCCCE--EEEEEEECCCCcEEEEEEEecCccc---cHHHHHHHHHHHhCCCCCCCcEEEEEeeC-----
Confidence 45799999999999 8 8999999999999999999865333 24577899999999999999999999863
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCc--EEEEc
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD--WKLHA 172 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~--~KL~d 172 (771)
..+||||||| ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.++. +||+|
T Consensus 89 ---~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~ql~~~L~~LH~-~~ivH~Dlkp~Nill~~~~~~~~kl~D 161 (361)
T 3uc3_A 89 ---THLAIIMEYASGGELYERICNAGR---FSEDEARFFFQQLLSGVSYCHS-MQICHRDLKLENTLLDGSPAPRLKICD 161 (361)
T ss_dssp ---SEEEEEEECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHH-TTCCSCCCCGGGEEECSSSSCCEEECC
T ss_pred ---CEEEEEEEeCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEEcCCCCceEEEee
Confidence 4899999999 579999877543 2344566779999999999997 89999999999999988776 99999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh------
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------ 246 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l------ 246 (771)
||++....... ......++..|+|||++.+. ...+.++|+|||||++|+|++|..||.....
T Consensus 162 fg~a~~~~~~~-------~~~~~~gt~~y~aPE~~~~~-----~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~ 229 (361)
T 3uc3_A 162 FGYSKSSVLHS-------QPKSTVGTPAYIAPEVLLRQ-----EYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRK 229 (361)
T ss_dssp CCCC----------------------CTTSCHHHHHCS-----SCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHH
T ss_pred cCccccccccC-------CCCCCcCCCCcCChhhhcCC-----CCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHH
Confidence 99987443211 01123455689999998753 2223458999999999999999998864221
Q ss_pred --h----------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 247 --R----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 247 --~----------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
. ....++..+.+++.+||..+|.+||++.++++|+ ||
T Consensus 230 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp-~f 278 (361)
T 3uc3_A 230 TIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTHS-WF 278 (361)
T ss_dssp HHHHHHTTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSH-HH
T ss_pred HHHHHhcCCCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCc-ch
Confidence 0 1124677899999999999999999999999994 44
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-35 Score=315.39 Aligned_cols=244 Identities=15% Similarity=0.250 Sum_probs=187.2
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEEC---CCCCcEEEEEEeCCCC--chhHHHHHHHHHHHHhcCCCCCeeEEeeeEE
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSK---DDGSPVSIFSISGTNA--QDGHLAAARNGVKRLRTVRHPNILAFLHSTE 89 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k---~~g~~VaIK~~~~~~~--~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e 89 (771)
+....|++.+.||.|+ | +||+|++. .+|+.|+||++.+... .......+++|+++|+.|+||||++++++++
T Consensus 14 ~~~~~y~~~~~lG~G~~g--~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~ 91 (327)
T 3a62_A 14 IRPECFELLRVLGKGGYG--KVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQ 91 (327)
T ss_dssp CCGGGEEEEEEEEEETTE--EEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEE
T ss_pred CCHHHeEEEEEEEeCCCE--EEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEE
Confidence 3445799999999998 8 99999985 6899999999986532 1233556788999999999999999999998
Q ss_pred ecccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCc
Q 004157 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD 167 (771)
Q Consensus 90 ~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~ 167 (771)
.. ..+||||||| ++|.+++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.
T Consensus 92 ~~--------~~~~lv~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~qi~~al~~lH~-~~ivH~Dlkp~Nill~~~~~ 159 (327)
T 3a62_A 92 TG--------GKLYLILEYLSGGELFMQLEREGIF---MEDTACFYLAEISMALGHLHQ-KGIIYRDLKPENIMLNHQGH 159 (327)
T ss_dssp CS--------SCEEEEEECCTTEEHHHHHHHHSSC---CHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCTTTEEECTTSC
T ss_pred cC--------CEEEEEEeCCCCCcHHHHHHhCCCC---CHHHHHHHHHHHHHHHHHHHh-CCEEcccCCHHHeEECCCCc
Confidence 63 4899999999 5799999876532 344466679999999999997 89999999999999999999
Q ss_pred EEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh
Q 004157 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR 247 (771)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~ 247 (771)
+||+|||++........ ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 160 ~kl~Dfg~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~g~~pf~~~~~~ 227 (327)
T 3a62_A 160 VKLTDFGLCKESIHDGT------VTHTFCGTIEYMAPEILMR------SGHNRAVDWWSLGALMYDMLTGAPPFTGENRK 227 (327)
T ss_dssp EEECCCSCC----------------CTTSSCCTTSCHHHHTT------SCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred EEEEeCCcccccccCCc------cccccCCCcCccCHhhCcC------CCCCCcccchhHHHHHHHHHHCCCCCCCCCHH
Confidence 99999999876433211 1112344568999999876 35678999999999999999999998643211
Q ss_pred ------------ccCCCCcchHHHHHHHhccCCCCCC-----ChHHHhhCCCCCcc
Q 004157 248 ------------NTASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENSEYFQN 286 (771)
Q Consensus 248 ------------~~~~IP~~l~~~i~~lL~~~P~~Rp-----s~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||..+|.+|| ++.++++| +||++
T Consensus 228 ~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h-p~f~~ 282 (327)
T 3a62_A 228 KTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH-PFFRH 282 (327)
T ss_dssp HHHHHHHHTCCCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS-GGGSS
T ss_pred HHHHHHHhCCCCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC-CcccC
Confidence 1134677899999999999999999 78899998 66665
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-35 Score=317.32 Aligned_cols=241 Identities=19% Similarity=0.237 Sum_probs=195.7
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch------hHHHHHHHHHHHHhcCCCCCeeEEeeeEEec
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD------GHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~------~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e 91 (771)
.+|++.+.||.|+ | +||+|+++.+|+.|+||++......+ .....+.+|+++|++|+||||++++++++..
T Consensus 24 ~~y~~~~~lG~G~~g--~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 24 QKYSTMSPLGSGAFG--FVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHEEEEEECSSSSSC--SEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cceEEEeEEEecCCE--EEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 4699999999998 8 99999999999999999998754221 1334567899999999999999999999863
Q ss_pred ccCcCCcccEEEEEecCC--c-chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcE
Q 004157 92 NIDATSTKITIYIVTEPV--M-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDW 168 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~ 168 (771)
..+|+||||+ + +|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+
T Consensus 102 --------~~~~lv~e~~~~g~~l~~~~~~~~~---l~~~~~~~i~~qi~~~L~~LH~-~~ivH~Dlkp~NIll~~~~~~ 169 (335)
T 3dls_A 102 --------GFFQLVMEKHGSGLDLFAFIDRHPR---LDEPLASYIFRQLVSAVGYLRL-KDIIHRDIKDENIVIAEDFTI 169 (335)
T ss_dssp --------SEEEEEEECCTTSCBHHHHHHTCCC---CCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEECTTSCE
T ss_pred --------CEEEEEEEeCCCCccHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeEEeccCHHHEEEcCCCcE
Confidence 4899999998 3 78888877543 2344566779999999999997 899999999999999999999
Q ss_pred EEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh--
Q 004157 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-- 246 (771)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-- 246 (771)
||+|||++........ .....++..|+|||++.+. ...+.++|+|||||++|+|++|..||.....
T Consensus 170 kL~Dfg~a~~~~~~~~-------~~~~~gt~~y~aPE~~~~~-----~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~ 237 (335)
T 3dls_A 170 KLIDFGSAAYLERGKL-------FYTFCGTIEYCAPEVLMGN-----PYRGPELEMWSLGVTLYTLVFEENPFCELEETV 237 (335)
T ss_dssp EECCCTTCEECCTTCC-------BCEECSCGGGCCHHHHTTC-----CBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGT
T ss_pred EEeecccceECCCCCc-------eeccCCCccccChhhhcCC-----CCCCCcccchhHHHHHHHHHhCCCchhhHHHHH
Confidence 9999999987654211 1223445689999998763 2236789999999999999999998854321
Q ss_pred ----hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 247 ----RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 247 ----~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
.....++..+.+++.+||..+|.+||++.++++| +||++
T Consensus 238 ~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h-p~~~~ 280 (335)
T 3dls_A 238 EAAIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD-PWVTQ 280 (335)
T ss_dssp TTCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC-TTTTC
T ss_pred hhccCCCcccCHHHHHHHHHHccCChhhCcCHHHHhcC-ccccC
Confidence 1224567889999999999999999999999999 55544
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-35 Score=306.39 Aligned_cols=242 Identities=20% Similarity=0.338 Sum_probs=179.0
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
.+|++++.||.|+ | +||+|+++.+|+.|+||++...... ......+.+|++++++++||||++++++++..
T Consensus 11 ~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 83 (278)
T 3cok_A 11 EDFKVGNLLGKGSFA--GVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDS----- 83 (278)
T ss_dssp GGEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECS-----
T ss_pred ccceeeeeecCCCce--EEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccC-----
Confidence 3699999999998 7 9999999999999999999753211 12346788999999999999999999999863
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 84 ---~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~p~Nili~~~~~~kl~dfg 157 (278)
T 3cok_A 84 ---NYVYLVLEMCHNGEMNRYLKNRVK--PFSENEARHFMHQIITGMLYLHS-HGILHRDLTLSNLLLTRNMNIKIADFG 157 (278)
T ss_dssp ---SEEEEEEECCTTEEHHHHHHTCSS--CCCHHHHHHHHHHHHHHHHHHHH-TTEECSSCCGGGEEECTTCCEEECCCT
T ss_pred ---CeEEEEEecCCCCcHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEEcCCCCEEEEeec
Confidence 4899999999 479998886422 12344566779999999999997 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------ 248 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~------ 248 (771)
++......... .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||.......
T Consensus 158 ~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 225 (278)
T 3cok_A 158 LATQLKMPHEK------HYTLCGTPNYISPEIATR------SAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV 225 (278)
T ss_dssp TCEECC----------------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CC
T ss_pred ceeeccCCCCc------ceeccCCCCcCCcchhcC------CCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHh
Confidence 99876532111 112234558999999876 356679999999999999999998886433211
Q ss_pred ------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 249 ------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 249 ------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
...++..+.+++.+||..+|.+||++.++++| +||..
T Consensus 226 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h-~~~~~ 268 (278)
T 3cok_A 226 LADYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDH-PFMSR 268 (278)
T ss_dssp SSCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS-TTTC-
T ss_pred hcccCCccccCHHHHHHHHHHcccCHhhCCCHHHHhcC-ccccC
Confidence 13467778999999999999999999999999 45543
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-35 Score=321.08 Aligned_cols=244 Identities=16% Similarity=0.271 Sum_probs=181.9
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.+|++.+.||.|+ | +||+|.++.+|+.|+||++............+.+|+++|+.|+||||+++++++.....- .
T Consensus 29 ~~y~~~~~lG~G~~g--~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~--~ 104 (367)
T 2fst_X 29 ERYQNLSPVGSGAYG--SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSL--E 104 (367)
T ss_dssp TTEEEEEECC----C--CEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSG--G
T ss_pred CceEEeeEEeecCCe--EEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCcc--c
Confidence 4799999999998 8 999999999999999999976555555667788999999999999999999998753110 0
Q ss_pred cccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
....+|+|||++ ++|.++++... .....+..+++||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 105 ~~~~~~lv~e~~~~~L~~~~~~~~----l~~~~~~~i~~qi~~aL~~LH~-~givH~Dlkp~NIll~~~~~~kL~DFG~a 179 (367)
T 2fst_X 105 EFNDVYLVTHLMGADLNNIVKCQK----LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLA 179 (367)
T ss_dssp GCCCCEEEEECCCEECC-----CC----CCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEECTTCCEEECC----
T ss_pred cCCeEEEEecccCCCHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHH-CCeeeCCCCHhhEEECCCCCEEEeecccc
Confidence 124689999999 57888887643 2345567779999999999997 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h-----
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R----- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~----- 247 (771)
+..... .....++..|+|||++.+. ..++.++|+|||||++|+|++|.+||...+. .
T Consensus 180 ~~~~~~---------~~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~ 245 (367)
T 2fst_X 180 RHTADE---------MTGYVATRWYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 245 (367)
T ss_dssp --------------------CCCTTCCHHHHTTC-----CSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred cccccc---------CCCcCcCcCccChHHHcCC-----cCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 765431 1123455689999998753 3567899999999999999999998853211 0
Q ss_pred ----------------------c------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 ----------------------N------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 ----------------------~------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
. ...++..+.+++.+||..||.+||++.++|+| +||+.
T Consensus 246 ~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h-p~~~~ 317 (367)
T 2fst_X 246 VGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH-AYFAQ 317 (367)
T ss_dssp HCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS-GGGTT
T ss_pred hCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC-hhhhh
Confidence 0 02345668899999999999999999999999 56643
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=305.02 Aligned_cols=245 Identities=19% Similarity=0.211 Sum_probs=196.8
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.+|++.+.||.|+ | +||+|+++.+|+.|+||++..........+.+.+|++.+++++||||+++++++..+.
T Consensus 6 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----- 78 (279)
T 2w5a_A 6 EDYEVLYTIGTGSYG--RCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRT----- 78 (279)
T ss_dssp GGEEEEEEEEECSSS--EEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGG-----
T ss_pred hheeeehhccCCCCc--EEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCC-----
Confidence 4699999999998 8 9999999999999999999976655566778999999999999999999999886544
Q ss_pred cccEEEEEecCC--cchHHHHHHhCC-CCCCcHHHHHHHHHHHHHHHHHHHcCCC-----ceecCCCCCCEEEcCCCcEE
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCK-----LVHGNVCLSSVVVTQTLDWK 169 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~-----ivH~dIkp~NI~v~~~G~~K 169 (771)
...+|+||||+ ++|.+++..... ........+..++.||+.||.|||+ .+ ++||||||+||+++.+|.+|
T Consensus 79 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~-~~~~~~~ivH~dl~p~NIl~~~~~~~k 156 (279)
T 2w5a_A 79 -NTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR-RSDGGHTVLHRDLKPANVFLDGKQNVK 156 (279)
T ss_dssp -GTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH-HC------CCCCCSGGGEEECSSSCEE
T ss_pred -CceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhc-ccCCCCeeEEeccchhhEEEcCCCCEE
Confidence 34899999999 479999876432 1112345567779999999999997 67 99999999999999999999
Q ss_pred EEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh--
Q 004157 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-- 247 (771)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~-- 247 (771)
|+|||++....... .......++..|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 157 l~dfg~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~ 224 (279)
T 2w5a_A 157 LGDFGLARILNHDT------SFAKTFVGTPYYMSPEQMNR------MSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL 224 (279)
T ss_dssp ECCCCHHHHC---C------HHHHHHHSCCTTCCHHHHHC------C-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred EecCchheeecccc------ccccccCCCccccChHHhcc------CCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHH
Confidence 99999998765321 01112334568999999876 35678999999999999999999887543211
Q ss_pred -----------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 248 -----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 248 -----------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
....+|..+.+++.+||+.+|.+||++.+++++.++.
T Consensus 225 ~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~ 272 (279)
T 2w5a_A 225 AGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLIL 272 (279)
T ss_dssp HHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCC
T ss_pred HHHHhhcccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhh
Confidence 1135678899999999999999999999999985443
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-34 Score=316.44 Aligned_cols=239 Identities=15% Similarity=0.139 Sum_probs=193.4
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.|++.+.||.|+ | +||+|+++.+|+.|+||++...... ....+.+.+|+++|++|+||||+++++++..+
T Consensus 55 ~y~~~~~lG~G~~g--~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~------ 126 (348)
T 1u5q_A 55 LFSDLREIGHGSFG--AVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE------ 126 (348)
T ss_dssp HEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET------
T ss_pred heeeeeEEccCCCE--EEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC------
Confidence 488999999998 8 9999999999999999999865433 34456788999999999999999999999864
Q ss_pred cccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+||||||+ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 127 --~~~~lv~e~~~g~l~~~l~~~~~~--l~~~~~~~i~~qi~~aL~~LH~-~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 201 (348)
T 1u5q_A 127 --HTAWLVMEYCLGSASDLLEVHKKP--LQEVEIAAVTHGALQGLAYLHS-HNMIHRDVKAGNILLSEPGLVKLGDFGSA 201 (348)
T ss_dssp --TEEEEEEECCSEEHHHHHHHHTSC--CCHHHHHHHHHHHHHHHHHHHH-TTCBCCCCSGGGEEEETTTEEEECCCTTC
T ss_pred --CeEEEEEecCCCCHHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHh-CCeeeCCCCHHHEEECCCCCEEEeeccCc
Confidence 4899999999 6788888654321 2344566779999999999997 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL---------- 246 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l---------- 246 (771)
....... ...++..|+|||++.+.. ...++.++|+|||||++|||++|.+||.....
T Consensus 202 ~~~~~~~----------~~~gt~~y~aPE~~~~~~---~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~ 268 (348)
T 1u5q_A 202 SIMAPAN----------SFVGTPYWMAPEVILAMD---EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN 268 (348)
T ss_dssp BSSSSBC----------CCCSCGGGCCHHHHHTTS---SCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS
T ss_pred eecCCCC----------cccCCcceeCHhhhcccc---CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc
Confidence 7654311 123455899999985310 13567799999999999999999988753211
Q ss_pred ----hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 247 ----RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 247 ----~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
.....+|..+.+++.+||+.+|.+||++.++++|+++.
T Consensus 269 ~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~ 310 (348)
T 1u5q_A 269 ESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVL 310 (348)
T ss_dssp CCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhChhhh
Confidence 01235677899999999999999999999999995443
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-34 Score=306.72 Aligned_cols=239 Identities=19% Similarity=0.208 Sum_probs=191.0
Q ss_pred CCCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecc
Q 004157 15 GVKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (771)
Q Consensus 15 ~~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~ 92 (771)
.+...+|++.+.||.|+ | +||+|+++.++..|+||++..... .....+.+.+|++.++.++||||++++++++.+
T Consensus 7 ~~~~~~y~i~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~- 83 (294)
T 4eqm_A 7 KIINERYKIVDKLGGGGMS--TVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEED- 83 (294)
T ss_dssp SCEETTEEEEEEEEEETTE--EEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECS-
T ss_pred hHhhccEEEEEEEccCCCE--EEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeC-
Confidence 34567899999999998 8 999999999999999999976433 335567889999999999999999999999863
Q ss_pred cCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEE
Q 004157 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL 170 (771)
..+|+||||+ ++|.+++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||
T Consensus 84 -------~~~~lv~e~~~g~~L~~~l~~~~~~---~~~~~~~~~~qi~~~l~~lH~-~~i~H~Dlkp~Nil~~~~~~~kl 152 (294)
T 4eqm_A 84 -------DCYYLVMEYIEGPTLSEYIESHGPL---SVDTAINFTNQILDGIKHAHD-MRIVHRDIKPQNILIDSNKTLKI 152 (294)
T ss_dssp -------SEEEEEEECCCSCBHHHHHHHHCSC---CHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEECTTSCEEE
T ss_pred -------CeEEEEEeCCCCCCHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECCCCCEEE
Confidence 4899999999 4899999876532 344466679999999999997 89999999999999999999999
Q ss_pred EccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL---- 246 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l---- 246 (771)
+|||++......... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||.....
T Consensus 153 ~Dfg~~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~ 221 (294)
T 4eqm_A 153 FDFGIAKALSETSLT-----QTNHVLGTVQYFSPEQAKG------EATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIA 221 (294)
T ss_dssp CCCSSSTTC------------------CCSSCCHHHHHT------CCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHH
T ss_pred EeCCCcccccccccc-----ccCccccCccccCHhHhcC------CCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence 999999876542111 1112234568999999876 3567889999999999999999999864321
Q ss_pred -------------hccCCCCcchHHHHHHHhccCCCCCC-ChHHHh
Q 004157 247 -------------RNTASIPKSLLPDYQRLLSSMPSRRL-NSSKLI 278 (771)
Q Consensus 247 -------------~~~~~IP~~l~~~i~~lL~~~P~~Rp-s~~~lL 278 (771)
.....+|..+.+++.+||..+|.+|| ++.++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~ 267 (294)
T 4eqm_A 222 IKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMK 267 (294)
T ss_dssp HHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHH
T ss_pred HHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHH
Confidence 11245788999999999999999999 454443
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=307.85 Aligned_cols=253 Identities=15% Similarity=0.197 Sum_probs=199.6
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-------hhHHHHHHHHHHHHhcCC-CCCeeEEeee
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-------DGHLAAARNGVKRLRTVR-HPNILAFLHS 87 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-------~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~ 87 (771)
...+|++.+.||.|+ | +||+|+++.+|+.|+||++...... ....+.+.+|++++++++ ||||++++++
T Consensus 15 ~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~ 92 (298)
T 1phk_A 15 FYENYEPKEILGRGVSS--VVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDT 92 (298)
T ss_dssp CTTTEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred hhhccceeeeecCCCce--EEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeee
Confidence 456899999999998 7 9999999999999999999865321 133567789999999996 9999999999
Q ss_pred EEecccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCC
Q 004157 88 TEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT 165 (771)
Q Consensus 88 ~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~ 165 (771)
++.. ..+|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||+|+||+++.+
T Consensus 93 ~~~~--------~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~p~Nil~~~~ 160 (298)
T 1phk_A 93 YETN--------TFFFLVFDLMKKGELFDYLTEKVT---LSEKETRKIMRALLEVICALHK-LNIVHRDLKPENILLDDD 160 (298)
T ss_dssp EECS--------SEEEEEEECCTTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEECTT
T ss_pred eccC--------CeEEEEEeccCCCcHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCcceEEEcCC
Confidence 9763 4899999999 489999987543 2344566779999999999997 899999999999999999
Q ss_pred CcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh
Q 004157 166 LDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE 245 (771)
Q Consensus 166 G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~ 245 (771)
|.+||+|||++........ .....+...|+|||++.+........++.++|+|||||++|+|++|..||....
T Consensus 161 ~~~kl~dfg~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 233 (298)
T 1phk_A 161 MNIKLTDFGFSCQLDPGEK-------LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK 233 (298)
T ss_dssp CCEEECCCTTCEECCTTCC-------BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CcEEEecccchhhcCCCcc-------cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCcc
Confidence 9999999999987654211 111233458999999864322122356779999999999999999998875322
Q ss_pred hh----------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcchhhhh
Q 004157 246 LR----------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKLVDT 291 (771)
Q Consensus 246 l~----------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n~lv~~ 291 (771)
.. ....+|..+.+++.+||+.+|.+||++.++++| +||++..++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h-~~~~~~~~~~ 294 (298)
T 1phk_A 234 QMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH-PFFQQYVVEE 294 (298)
T ss_dssp HHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS-GGGCTTC---
T ss_pred HHHHHHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhC-hHhhhccchh
Confidence 10 113467789999999999999999999999998 6776655443
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-35 Score=327.60 Aligned_cols=255 Identities=15% Similarity=0.146 Sum_probs=190.0
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHH---HHHhcCCCCCeeEEe-------
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGV---KRLRTVRHPNILAFL------- 85 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei---~~Lk~LrHPnIlkv~------- 85 (771)
...|++++.||.|+ | +||+|+++.+|+.||||++..... .....+.+++|+ +.|+.++||||++++
T Consensus 72 ~~~y~~~~~lG~G~~g--~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~ 149 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPY--AYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPF 149 (377)
T ss_dssp CEEEEEEEEEEEETTE--EEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCS
T ss_pred CceEEEcceeecCCCE--EEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhh
Confidence 45699999999998 8 999999999999999999985432 234567888999 556666899999998
Q ss_pred eeEEeccc--------CcC-CcccEEEEEecCC-cchHHHHHHhCCCCCC----cHHHHHHHHHHHHHHHHHHHcCCCce
Q 004157 86 HSTEVENI--------DAT-STKITIYIVTEPV-MPLSEKIKELGLEGSQ----RDEYYAWGLNQIAKAVSFLNNDCKLV 151 (771)
Q Consensus 86 d~~e~e~~--------d~~-~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~----~~~~i~~gl~QI~~aL~fLH~~~~iv 151 (771)
++++..+. ++. ..-...||||||+ ++|.+++......... ....+..++.||+.||.|||+ .+++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~iv 228 (377)
T 3byv_A 150 DLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH-YGLV 228 (377)
T ss_dssp EEEECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHH-TTEE
T ss_pred hhhhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHh-CCee
Confidence 66665321 000 0000379999999 6899999875322210 023345579999999999997 8999
Q ss_pred ecCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhcccccc-----ccccCCCCCcchHHH
Q 004157 152 HGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDW-----TAVRKSPPWSIDSWG 226 (771)
Q Consensus 152 H~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~-----~~~~~~~~~~~Di~S 226 (771)
||||||+||+++.+|.+||+|||++...... .....+ ..|+|||++.+.- ......++.++|+||
T Consensus 229 HrDikp~NIll~~~~~~kL~DFG~a~~~~~~---------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwS 298 (377)
T 3byv_A 229 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAR---------VVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWA 298 (377)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTCE---------EECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHH
T ss_pred cCCCCHHHEEEcCCCCEEEEechhheecCCc---------ccCCCC-cCccChhhhcccccccccccccccCChhhhHHH
Confidence 9999999999999999999999999864321 112233 7899999987630 000014678999999
Q ss_pred HHHHHHHHhhCCCCCChhhh--------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 227 LGCLIYELFSGMRLSKTEEL--------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 227 LG~li~el~~g~~p~~~~~l--------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
|||++|||++|..||..... .....+|..+.+++.+||..+|.+||++.++++| +||+.
T Consensus 299 lG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h-p~f~~ 365 (377)
T 3byv_A 299 LGLVIYWIWCADLPITKDAALGGSEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMET-PEYEQ 365 (377)
T ss_dssp HHHHHHHHHHSSCCC------CCSGGGGSSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTS-HHHHH
T ss_pred HHHHHHHHHHCCCCCcccccccchhhhhhhccCCCHHHHHHHHHHcCCCchhCCCHHHHhhC-hHHHH
Confidence 99999999999998865332 2235788999999999999999999999999998 55543
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-35 Score=328.09 Aligned_cols=246 Identities=14% Similarity=0.155 Sum_probs=196.2
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
..+|++.+.||.|+ | +||+|+++.+++.||||++.+.... ......+++|+.+++.++||||++++++++++
T Consensus 68 ~~~y~~~~~LG~G~fG--~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~---- 141 (410)
T 3v8s_A 68 AEDYEVVKVIGRGAFG--EVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD---- 141 (410)
T ss_dssp GGGEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS----
T ss_pred ccccEEEEEEEcCCCE--EEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC----
Confidence 45799999999998 8 9999999999999999999752110 11123477899999999999999999999863
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
.++||||||| ++|.++++...+ ....+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+||
T Consensus 142 ----~~~~lV~E~~~gg~L~~~l~~~~~----~e~~~~~~~~qi~~aL~~LH~-~givHrDLKp~NILl~~~g~ikL~DF 212 (410)
T 3v8s_A 142 ----RYLYMVMEYMPGGDLVNLMSNYDV----PEKWARFYTAEVVLALDAIHS-MGFIHRDVKPDNMLLDKSGHLKLADF 212 (410)
T ss_dssp ----SEEEEEECCCTTEEHHHHHHHCCC----CHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEECTTSCEEECCC
T ss_pred ----CEEEEEEeCCCCCcHHHHHHcCCC----CHHHHHHHHHHHHHHHHHHHH-CCeEeccCCHHHeeECCCCCEEEecc
Confidence 4899999999 579999987543 344566779999999999997 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------ 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------ 247 (771)
|++........ .......++..|+|||++.+... ...++.++|+|||||++|||++|.+||......
T Consensus 213 G~a~~~~~~~~-----~~~~~~~gt~~Y~APE~l~~~~~--~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i 285 (410)
T 3v8s_A 213 GTCMKMNKEGM-----VRCDTAVGTPDYISPEVLKSQGG--DGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKI 285 (410)
T ss_dssp TTCEECCTTSE-----EECCSCCSCGGGCCHHHHHTTTT--TCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH
T ss_pred ceeEeeccCCc-----ccccCCcCCccccCHHHhhccCC--CcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHH
Confidence 99987654211 11223345569999999875210 011567999999999999999999998643211
Q ss_pred ----------ccCCCCcchHHHHHHHhccCCCC--CCChHHHhhCCCCCcc
Q 004157 248 ----------NTASIPKSLLPDYQRLLSSMPSR--RLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 ----------~~~~IP~~l~~~i~~lL~~~P~~--Rps~~~lL~~~~fF~n 286 (771)
....++..+.+++++||..+|.+ |+++.++++| +||++
T Consensus 286 ~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H-p~f~~ 335 (410)
T 3v8s_A 286 MNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH-LFFKN 335 (410)
T ss_dssp HTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS-GGGCC
T ss_pred HhccccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC-ccccC
Confidence 11257788999999999988888 9999999998 67765
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-35 Score=312.66 Aligned_cols=245 Identities=18% Similarity=0.231 Sum_probs=192.7
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
...+|++.+.||.|+ | +||+|+++.+|+.|+||++...... ......+++|++++++++||||++++++++.+...
T Consensus 10 ~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 87 (311)
T 3ork_A 10 LSDRYELGEILGFGGMS--EVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPA 87 (311)
T ss_dssp ETTTEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETT
T ss_pred ecCcEEEEEEEccCCCE--EEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCC
Confidence 356799999999998 8 9999999999999999999875433 34567789999999999999999999999876533
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
....||||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|
T Consensus 88 ----~~~~~lv~e~~~g~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nil~~~~~~~kl~D 159 (311)
T 3ork_A 88 ----GPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSHQ-NGIIHRDVKPANIMISATNAVKVMD 159 (311)
T ss_dssp ----EEEEEEEEECCCEEEHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEEETTSCEEECC
T ss_pred ----CcccEEEEecCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCCCcCCCCHHHEEEcCCCCEEEee
Confidence 34679999999 479999987653 2344466679999999999997 8999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-----
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----- 247 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~----- 247 (771)
||++.......... .......++..|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 160 fg~a~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~ 230 (311)
T 3ork_A 160 FGIARAIADSGNSV---TQTAAVIGTAQYLSPEQARG------DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 230 (311)
T ss_dssp CSCC---------------------CCTTCCHHHHHT------CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred ccCccccccccccc---ccccccCcCcccCCHHHhcC------CCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence 99998765422110 11122344568999999876 35678999999999999999999988643211
Q ss_pred -----------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 -----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 -----------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
....+|..+.+++.+||+.+|.+||+..+.+.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~ 274 (311)
T 3ork_A 231 HVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRA 274 (311)
T ss_dssp HHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred HhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHH
Confidence 113578889999999999999999999988876
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=315.21 Aligned_cols=242 Identities=18% Similarity=0.270 Sum_probs=197.7
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
..+|++++.||.|+ | +||+++++.+++.|++|++..... .....+.+.+|+.+++.++||||++++++++..
T Consensus 40 ~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---- 113 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFA--KCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDN---- 113 (335)
T ss_dssp TEEEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS----
T ss_pred CCceEEEEEEeeCCCe--EEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC----
Confidence 34799999999998 8 999999999999999999986432 234567788999999999999999999999863
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+||||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+||
T Consensus 114 ----~~~~lv~e~~~~~~L~~~~~~~~~---l~~~~~~~i~~qi~~aL~~LH~-~~ivH~dlkp~NIl~~~~~~~kl~Df 185 (335)
T 2owb_A 114 ----DFVFVVLELCRRRSLLELHKRRKA---LTEPEARYYLRQIVLGCQYLHR-NRVIHRDLKLGNLFLNEDLEVKIGDF 185 (335)
T ss_dssp ----SEEEEEECCCTTCBHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHH-TTEECSCCCGGGEEECTTCCEEECCC
T ss_pred ----CeEEEEEecCCCCCHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHH-CCCEecCCCchhEEEcCCCCEEEeec
Confidence 4899999999 479888877543 2344566779999999999997 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------ 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------ 247 (771)
|++......... .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 186 g~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~ 253 (335)
T 2owb_A 186 GLATKVEYDGER------KKVLCGTPNYIAPEVLSK------KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI 253 (335)
T ss_dssp TTCEECCSTTCC------BCCCCSCCSSCCHHHHHT------SCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH
T ss_pred cCceecccCccc------ccccCCCccccCHHHhcc------CCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHH
Confidence 999876532111 112234558999999876 35678999999999999999999988643211
Q ss_pred ------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 ------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 ------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||+.+|.+||++.++++| .||.+
T Consensus 254 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~-~~~~~ 297 (335)
T 2owb_A 254 KKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLND-EFFTS 297 (335)
T ss_dssp HHTCCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS-HHHHT
T ss_pred hcCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC-ccccC
Confidence 113466778999999999999999999999998 55544
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-34 Score=318.77 Aligned_cols=251 Identities=14% Similarity=0.110 Sum_probs=181.8
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcC--CCCCeeEEe-------ee
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTV--RHPNILAFL-------HS 87 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~L--rHPnIlkv~-------d~ 87 (771)
..|++.+.||.|+ | +||+|+++.+|+.||||++..... .....+.+++|+++++.| +||||++++ ++
T Consensus 62 ~~y~~~~~lG~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~ 139 (371)
T 3q60_A 62 RKLKLVEPLRVGDRS--VVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDA 139 (371)
T ss_dssp EEEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEE
T ss_pred eeeeeeeeccCCCCE--EEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehh
Confidence 3599999999998 8 999999999999999999997654 234566778885544444 699988866 44
Q ss_pred EEecccCc---------CCcccEEEEEecCC-cchHHHHHHhCCCCCCcHH---HH-HHHHHHHHHHHHHHHcCCCceec
Q 004157 88 TEVENIDA---------TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDE---YY-AWGLNQIAKAVSFLNNDCKLVHG 153 (771)
Q Consensus 88 ~e~e~~d~---------~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~---~i-~~gl~QI~~aL~fLH~~~~ivH~ 153 (771)
+..+...+ ......+||||||| ++|.++++........... .+ .+++.||+.||.|||+ .+++||
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~-~~ivHr 218 (371)
T 3q60_A 140 VAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQS-KGLVHG 218 (371)
T ss_dssp EEETTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHH-TTEEET
T ss_pred eecCCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHH-CCCccC
Confidence 44322100 00014689999999 7899999875321111111 12 2335999999999997 899999
Q ss_pred CCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHH
Q 004157 154 NVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYE 233 (771)
Q Consensus 154 dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~e 233 (771)
||||+||+++.+|.+||+|||++...... .....++..|+|||++.+.. ..++.++|+|||||++||
T Consensus 219 Dikp~NIll~~~~~~kL~DFG~a~~~~~~---------~~~~~~t~~y~aPE~~~~~~----~~~~~~~DiwSlG~il~e 285 (371)
T 3q60_A 219 HFTPDNLFIMPDGRLMLGDVSALWKVGTR---------GPASSVPVTYAPREFLNAST----ATFTHALNAWQLGLSIYR 285 (371)
T ss_dssp TCSGGGEEECTTSCEEECCGGGEEETTCE---------EEGGGSCGGGCCHHHHTCSE----EECCHHHHHHHHHHHHHH
T ss_pred cCCHHHEEECCCCCEEEEecceeeecCCC---------ccCccCCcCCcChhhccCCC----CCcCccccHHHHHHHHHH
Confidence 99999999999999999999999866431 11234457899999986521 246789999999999999
Q ss_pred HhhCCCCCChhhh---------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 234 LFSGMRLSKTEEL---------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 234 l~~g~~p~~~~~l---------------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
|++|..||..... .....+|..+.+++.+||+.+|.+||++.++++| +||++
T Consensus 286 lltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h-p~f~~ 358 (371)
T 3q60_A 286 VWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMET-PEFLQ 358 (371)
T ss_dssp HHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTS-HHHHH
T ss_pred HHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC-HHHHH
Confidence 9999998865411 0113678889999999999999999999999998 56654
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-35 Score=319.42 Aligned_cols=244 Identities=18% Similarity=0.218 Sum_probs=197.0
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEeccc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENI 93 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~ 93 (771)
.-.+|++.+.||.|+ | +||+|+++.+|+.||||++.+... .....+.+.+|.++|+.+ +||+|+++++++++.
T Consensus 18 ~~~~y~~~~~lG~G~fg--~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~-- 93 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFG--KVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM-- 93 (353)
T ss_dssp -CTTEEEEEEEEEETTE--EEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECS--
T ss_pred chHHcEEEEEEeeCCCE--EEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcC--
Confidence 345799999999998 8 999999999999999999985321 112356678899999988 799999999999864
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEE
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~ 171 (771)
..+||||||| ++|.+++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+
T Consensus 94 ------~~~~lv~E~~~gg~L~~~l~~~~~~---~~~~~~~~~~qi~~aL~~LH~-~givHrDlkp~NIll~~~g~vkL~ 163 (353)
T 2i0e_A 94 ------DRLYFVMEYVNGGDLMYHIQQVGRF---KEPHAVFYAAEIAIGLFFLQS-KGIIYRDLKLDNVMLDSEGHIKIA 163 (353)
T ss_dssp ------SEEEEEEECCCSCBHHHHHHHHSSC---CHHHHHHHHHHHHHHHHHHHH-TTCBCCCCCGGGEEECTTSCEEEC
T ss_pred ------CEEEEEEeCCCCCcHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHH-CCEEeccCCHHHEEEcCCCcEEEE
Confidence 4899999999 5899999876432 344566779999999999997 899999999999999999999999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh----
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---- 247 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~---- 247 (771)
|||++........ ......++..|+|||++.+ ..++.++|+|||||++|||++|.+||......
T Consensus 164 DFG~a~~~~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~ 231 (353)
T 2i0e_A 164 DFGMCKENIWDGV------TTKTFCGTPDYIAPEIIAY------QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQ 231 (353)
T ss_dssp CCTTCBCCCCTTC------CBCCCCSCGGGCCHHHHTT------CCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred eCCcccccccCCc------ccccccCCccccChhhhcC------CCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHH
Confidence 9999986433211 1222344568999999876 46778999999999999999999998643211
Q ss_pred --------ccCCCCcchHHHHHHHhccCCCCCCC-----hHHHhhCCCCCcch
Q 004157 248 --------NTASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENSEYFQNK 287 (771)
Q Consensus 248 --------~~~~IP~~l~~~i~~lL~~~P~~Rps-----~~~lL~~~~fF~n~ 287 (771)
....++..+.+++.+||..+|.+|++ +.++++| +||++.
T Consensus 232 ~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h-~~f~~~ 283 (353)
T 2i0e_A 232 SIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH-AFFRYI 283 (353)
T ss_dssp HHHHCCCCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS-GGGTTC
T ss_pred HHHhCCCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC-ccccCC
Confidence 12456778999999999999999995 5888888 677653
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-34 Score=317.01 Aligned_cols=248 Identities=17% Similarity=0.253 Sum_probs=191.2
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
...+|++++.||.|+ | +||+|+++.+|+.||||++...... ..+|+++++.|+||||+++++++.......
T Consensus 5 ~~~~y~~~~~lG~G~fg--~V~~a~~~~~~~~vAiK~~~~~~~~------~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 76 (383)
T 3eb0_A 5 SSKKYSLGKTLGTGSFG--IVCEVFDIESGKRFALKKVLQDPRY------KNRELDIMKVLDHVNIIKLVDYFYTTGDEE 76 (383)
T ss_dssp -CTTEEEEEEEECC-CE--EEEEEEETTTCCEEEEEEEECCTTS------CCHHHHHHTTCCCTTBCCEEEEEEEC----
T ss_pred ccceEEEEEEEEeccCE--EEEEEEECCCCCEEEEEEEecCcch------HHHHHHHHHHcCCCCccchhheeeecCccc
Confidence 356799999999998 8 9999999999999999999754222 236999999999999999999986532100
Q ss_pred ------------------------------CCcccEEEEEecCC-cchHHHHHHhC-CCCCCcHHHHHHHHHHHHHHHHH
Q 004157 96 ------------------------------TSTKITIYIVTEPV-MPLSEKIKELG-LEGSQRDEYYAWGLNQIAKAVSF 143 (771)
Q Consensus 96 ------------------------------~~~~~~iyIVtE~v-~~L~~~L~~~~-~~~~~~~~~i~~gl~QI~~aL~f 143 (771)
.....++||||||| ++|.+.+.... .........+..+++||+.||.|
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~ 156 (383)
T 3eb0_A 77 PKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGF 156 (383)
T ss_dssp ---------------------------------CCEEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccCCCceEEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 01134689999999 67887776521 11223345567779999999999
Q ss_pred HHcCCCceecCCCCCCEEEc-CCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcc
Q 004157 144 LNNDCKLVHGNVCLSSVVVT-QTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSI 222 (771)
Q Consensus 144 LH~~~~ivH~dIkp~NI~v~-~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~ 222 (771)
||+ .+++||||||+||+++ .+|.+||+|||++........ .....++..|+|||++.+. ..++.++
T Consensus 157 LH~-~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~-------~~~~~~t~~y~aPE~~~~~-----~~~~~~~ 223 (383)
T 3eb0_A 157 IHS-LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP-------SVAYICSRFYRAPELMLGA-----TEYTPSI 223 (383)
T ss_dssp HHT-TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC-------CCCCCCCSSCCCHHHHTTC-----SSCCTHH
T ss_pred HHH-CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC-------CcCcccCCCccCHHHhcCC-----CCCCcch
Confidence 996 9999999999999997 689999999999987654221 1123445689999998753 3477899
Q ss_pred hHHHHHHHHHHHhhCCCCCChhhh----h-------------------------------------ccCCCCcchHHHHH
Q 004157 223 DSWGLGCLIYELFSGMRLSKTEEL----R-------------------------------------NTASIPKSLLPDYQ 261 (771)
Q Consensus 223 Di~SLG~li~el~~g~~p~~~~~l----~-------------------------------------~~~~IP~~l~~~i~ 261 (771)
|+|||||++|+|++|.+||..... . ....+|..+.+++.
T Consensus 224 DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 303 (383)
T 3eb0_A 224 DLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLE 303 (383)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHH
T ss_pred hhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHH
Confidence 999999999999999998864211 0 01236677999999
Q ss_pred HHhccCCCCCCChHHHhhCCCCCcc
Q 004157 262 RLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 262 ~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
+||..+|.+||++.++++| +||+.
T Consensus 304 ~~L~~dP~~R~t~~e~l~h-p~f~~ 327 (383)
T 3eb0_A 304 QILRYEPDLRINPYEAMAH-PFFDH 327 (383)
T ss_dssp HHCCSSGGGSCCHHHHHTS-GGGHH
T ss_pred HHccCChhhCCCHHHHhcC-HHHHH
Confidence 9999999999999999998 56653
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=306.28 Aligned_cols=239 Identities=18% Similarity=0.265 Sum_probs=192.5
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
-.+|++++.||.|+ | +||+|.++.++..|+||++....... .....+++|+++++.++||||++++++++..
T Consensus 8 ~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---- 81 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFG--NVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA---- 81 (279)
T ss_dssp GGGEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS----
T ss_pred cccEEEeeEEecCCCe--EEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecC----
Confidence 34699999999998 8 99999999999999999997532111 2345688999999999999999999999863
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+|+||||+ ++|.+++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+||
T Consensus 82 ----~~~~lv~e~~~~~~l~~~l~~~~~~---~~~~~~~~~~qi~~~l~~LH~-~~i~H~dlkp~Nili~~~~~~~l~Df 153 (279)
T 3fdn_A 82 ----TRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANALSYCHS-KRVIHRDIKPENLLLGSAGELKIADF 153 (279)
T ss_dssp ----SEEEEEECCCTTEEHHHHHHHHSSC---CHHHHHHHHHHHHHHHHHHHT-TTCEECCCCGGGEEECTTSCEEECSC
T ss_pred ----CEEEEEEecCCCCcHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHh-CCEecccCChHhEEEcCCCCEEEEec
Confidence 4899999999 4799988876432 334456679999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------ 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------ 247 (771)
|++....... .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 154 g~~~~~~~~~--------~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~ 219 (279)
T 3fdn_A 154 GWSVHAPSSR--------RTDLCGTLDYLPPEMIEG------RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 219 (279)
T ss_dssp CEESCC----------------CCCCTTCCHHHHTT------CCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH
T ss_pred cccccCCccc--------ccccCCCCCccCHhHhcc------CCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHH
Confidence 9986543321 112234568999999876 35677999999999999999999988643221
Q ss_pred ------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 ------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 ------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
....++..+.+++.+||+.+|.+||++.++++| +||+
T Consensus 220 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h-~~~~ 262 (279)
T 3fdn_A 220 SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH-PWIT 262 (279)
T ss_dssp HHTCCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC-HHHH
T ss_pred HhCCCCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC-cccc
Confidence 123467789999999999999999999999999 4443
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-34 Score=313.14 Aligned_cols=238 Identities=17% Similarity=0.215 Sum_probs=191.5
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-----CCCeeEEeeeEE
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-----HPNILAFLHSTE 89 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-----HPnIlkv~d~~e 89 (771)
+...+|++.++||.|+ | +||+|+++.+|+.||||++... ......+.+|+.+++.++ ||||+++++++.
T Consensus 32 ~~~~~y~~~~~lG~G~~g--~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~ 106 (360)
T 3llt_A 32 LLNNAFLVIRKMGDGTFG--RVLLCQHIDNKKYYAVKVVRNI---KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFM 106 (360)
T ss_dssp EETTTEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEECSC---HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEE
T ss_pred EecCEEEEEEEEcccCCe--EEEEEEECCCCeEEEEEEeccc---hhhhhhhHHHHHHHHHhcccCCCCCCeecccceee
Confidence 3456899999999998 8 9999999999999999999742 234556778999999997 999999999998
Q ss_pred ecccCcCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC----
Q 004157 90 VENIDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ---- 164 (771)
Q Consensus 90 ~e~~d~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~---- 164 (771)
.. ..+||||||+ ++|.+++....... .....+..++.||+.||.|||+ .+++||||||+||+++.
T Consensus 107 ~~--------~~~~lv~e~~~~~L~~~~~~~~~~~-~~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~~~~ 176 (360)
T 3llt_A 107 YY--------DHMCLIFEPLGPSLYEIITRNNYNG-FHIEDIKLYCIEILKALNYLRK-MSLTHTDLKPENILLDDPYFE 176 (360)
T ss_dssp ET--------TEEEEEECCCCCBHHHHHHHTTTCC-CCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEESCTTCC
T ss_pred EC--------CeeEEEEcCCCCCHHHHHHhcCCCC-CCHHHHHHHHHHHHHHHHHHHH-CCeeeCCCCcccEEEcccccc
Confidence 74 4899999999 57999998765322 2344566779999999999997 89999999999999975
Q ss_pred ---------------------CCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcch
Q 004157 165 ---------------------TLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSID 223 (771)
Q Consensus 165 ---------------------~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~D 223 (771)
++.+||+|||++....... ....++..|+|||++.+ ..++.++|
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~---------~~~~gt~~y~aPE~~~~------~~~~~~~D 241 (360)
T 3llt_A 177 KSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH---------GSIINTRQYRAPEVILN------LGWDVSSD 241 (360)
T ss_dssp EEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC---------CSCCSCGGGCCHHHHTT------CCCCTTHH
T ss_pred ccccchhcccccccccccccCCCCEEEEeccCceecCCCC---------cCccCcccccCcHHHcC------CCCCCccc
Confidence 8899999999998654321 11234558999999876 36778999
Q ss_pred HHHHHHHHHHHhhCCCCCChhhhh--------ccCCC-------------------------------------------
Q 004157 224 SWGLGCLIYELFSGMRLSKTEELR--------NTASI------------------------------------------- 252 (771)
Q Consensus 224 i~SLG~li~el~~g~~p~~~~~l~--------~~~~I------------------------------------------- 252 (771)
+|||||++|+|++|..||...... ....+
T Consensus 242 iwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 321 (360)
T 3llt_A 242 MWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCL 321 (360)
T ss_dssp HHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCC
T ss_pred hHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcc
Confidence 999999999999999988532110 00111
Q ss_pred -------CcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 253 -------PKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 253 -------P~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
+..+.+++.+||+.||.+||++.++|+| +||
T Consensus 322 ~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~h-p~f 359 (360)
T 3llt_A 322 PLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKH-KFL 359 (360)
T ss_dssp CHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTS-GGG
T ss_pred cccccchHHHHHHHHHHHhcCChhhCCCHHHHhcC-ccc
Confidence 1446689999999999999999999998 455
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-35 Score=330.57 Aligned_cols=243 Identities=15% Similarity=0.199 Sum_probs=188.4
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
.+|++.+.||.|+ | +||+|.++.+|+.||||++.+... .......+.+|+++|+.++||||++++++++..
T Consensus 148 ~~y~~~~~lG~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~----- 220 (446)
T 4ejn_A 148 NEFEYLKLLGKGTFG--KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTH----- 220 (446)
T ss_dssp GGEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEET-----
T ss_pred HHcEEeEEEeeCcCE--EEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeC-----
Confidence 4699999999998 8 999999999999999999985321 122345677899999999999999999999874
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+||||||| ++|..++...... ....+..++.||+.||.|||+..+|+||||||+||+++.+|.+||+|||
T Consensus 221 ---~~~~lv~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG 294 (446)
T 4ejn_A 221 ---DRLCFVMEYANGGELFFHLSRERVF---SEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFG 294 (446)
T ss_dssp ---TEEEEEECCCSSCBHHHHHHHHSCC---CHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCC
T ss_pred ---CEEEEEEeeCCCCcHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCC
Confidence 4899999999 4799988776532 3444666799999999999954799999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------- 247 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------- 247 (771)
++........ ......++..|+|||++.+ ..++.++|+|||||++|||++|..||......
T Consensus 295 ~a~~~~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~ 362 (446)
T 4ejn_A 295 LCKEGIKDGA------TMKTFCGTPEYLAPEVLED------NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL 362 (446)
T ss_dssp CCCTTCC-----------CCSSSCGGGCCHHHHHT------SCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred CceeccCCCc------ccccccCCccccCHhhcCC------CCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHH
Confidence 9976433211 1112344558999999876 46788999999999999999999988543211
Q ss_pred -----ccCCCCcchHHHHHHHhccCCCCCC-----ChHHHhhCCCCCcch
Q 004157 248 -----NTASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENSEYFQNK 287 (771)
Q Consensus 248 -----~~~~IP~~l~~~i~~lL~~~P~~Rp-----s~~~lL~~~~fF~n~ 287 (771)
....++..+.+++.+||..+|.+|| ++.++++| +||.+.
T Consensus 363 ~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h-p~f~~~ 411 (446)
T 4ejn_A 363 MEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH-RFFAGI 411 (446)
T ss_dssp HCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS-GGGTTC
T ss_pred hCCCCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC-ccccCC
Confidence 1245777899999999999999999 99999998 677653
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-34 Score=302.06 Aligned_cols=238 Identities=17% Similarity=0.246 Sum_probs=195.0
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
...|++.+.||.|+ | +||+|+++.++..|++|++...... ..+.+.+|++++++|+||||++++++++..
T Consensus 8 ~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~a~k~~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----- 78 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWG--EVKIAVQKGTRIRRAAKKIPKYFVE--DVDRFKQEIEIMKSLDHPNIIRLYETFEDN----- 78 (277)
T ss_dssp HHHEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEEGGGCS--CHHHHHHHHHHHHTCCCTTBCCEEEEEECS-----
T ss_pred hhhEEeeeEEeecCCE--EEEEEEeCCCCcEEEEEeehhhccc--hHHHHHHHHHHHHhCCCCCEeeEEEEEecC-----
Confidence 34699999999998 8 9999999999999999999864332 256788999999999999999999999863
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEE---cCCCcEEEE
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV---TQTLDWKLH 171 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v---~~~G~~KL~ 171 (771)
..+|+||||+ ++|.+++...... ....+..++.||+.||.|||+ .+++||||||+||++ +.++.+||+
T Consensus 79 ---~~~~lv~e~~~~~~L~~~~~~~~~~---~~~~~~~i~~~i~~~l~~lH~-~~i~H~dlkp~Nil~~~~~~~~~~~l~ 151 (277)
T 3f3z_A 79 ---TDIYLVMELCTGGELFERVVHKRVF---RESDAARIMKDVLSAVAYCHK-LNVAHRDLKPENFLFLTDSPDSPLKLI 151 (277)
T ss_dssp ---SEEEEEEECCCSCBHHHHHHHHCSC---CHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEESSSSTTCCEEEC
T ss_pred ---CeEEEEEeccCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCccCCCCCHHHEEEecCCCCCcEEEE
Confidence 4899999999 4798888776532 344466779999999999997 899999999999999 788999999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh----
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---- 247 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~---- 247 (771)
|||++........ .....++..|+|||++.+ .++.++|+|||||++|+|++|..||......
T Consensus 152 Dfg~~~~~~~~~~-------~~~~~~t~~y~aPE~~~~-------~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~ 217 (277)
T 3f3z_A 152 DFGLAARFKPGKM-------MRTKVGTPYYVSPQVLEG-------LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVML 217 (277)
T ss_dssp CCTTCEECCTTSC-------BCCCCSCTTTCCHHHHTT-------CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred ecccceeccCccc-------hhccCCCCCccChHHhcc-------cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence 9999987654211 112234568999999865 3567999999999999999999888542211
Q ss_pred ------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 ------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 ------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||+.+|.+||++.++++| +||++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h-~~~~~ 267 (277)
T 3f3z_A 218 KIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH-EWFEK 267 (277)
T ss_dssp HHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS-HHHHH
T ss_pred HHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC-HHHhc
Confidence 012578889999999999999999999999998 55544
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-35 Score=331.89 Aligned_cols=244 Identities=18% Similarity=0.277 Sum_probs=197.8
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
+.-.+|.+++.||.|+ | +||.|+++.+|+.|+||++....... .....+++|+++|+.++||||++++++++..
T Consensus 13 ~~~~~Y~l~~~LG~G~fg--~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~-- 88 (476)
T 2y94_A 13 VKIGHYILGDTLGVGTFG--KVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTP-- 88 (476)
T ss_dssp CEETTEEEEEEEECCSSS--CEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECS--
T ss_pred ceecCEEEEEEEeeCCCe--EEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC--
Confidence 3455799999999998 8 99999999999999999997532211 2356788999999999999999999999874
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEE
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~ 171 (771)
..+||||||| ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+
T Consensus 89 ------~~~~lv~E~~~gg~L~~~l~~~~~---l~~~~~~~i~~qi~~aL~~LH~-~givHrDLkp~NIll~~~~~vkL~ 158 (476)
T 2y94_A 89 ------SDIFMVMEYVSGGELFDYICKNGR---LDEKESRRLFQQILSGVDYCHR-HMVVHRDLKPENVLLDAHMNAKIA 158 (476)
T ss_dssp ------SEEEEEEECCSSEEHHHHTTSSSS---CCHHHHHHHHHHHHHHHHHHHT-TTEECSCCSGGGEEECTTCCEEEC
T ss_pred ------CEEEEEEeCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCCCcccccHHHEEEecCCCeEEE
Confidence 4899999999 479998875432 2344566779999999999996 899999999999999999999999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh----
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---- 247 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~---- 247 (771)
|||++........ .....++..|+|||++.+. ...+.++|+|||||++|+|++|..||......
T Consensus 159 DFG~a~~~~~~~~-------~~~~~gt~~y~aPE~~~~~-----~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~ 226 (476)
T 2y94_A 159 DFGLSNMMSDGEF-------LRTSCGSPNYAAPEVISGR-----LYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFK 226 (476)
T ss_dssp CCSSCEECCTTCC-------BCCCCSCSTTCCHHHHTTC-----CBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHH
T ss_pred eccchhhcccccc-------ccccCCCcCeEChhhccCC-----CCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHH
Confidence 9999987654211 1123455689999998763 22356899999999999999999998654321
Q ss_pred --------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 --------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 --------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||..+|.+||++.++++| +||..
T Consensus 227 ~i~~~~~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h-p~~~~ 272 (476)
T 2y94_A 227 KICDGIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREH-EWFKQ 272 (476)
T ss_dssp HHHTTCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC-HHHHT
T ss_pred HHhcCCcCCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC-HHhhh
Confidence 113467789999999999999999999999998 55543
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-35 Score=306.80 Aligned_cols=245 Identities=18% Similarity=0.256 Sum_probs=191.9
Q ss_pred CCCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecc
Q 004157 15 GVKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (771)
Q Consensus 15 ~~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~ 92 (771)
.+...+|++++.||.|+ | +||.|+++.+|+.|+||++...... ......+.+|++.++.++||||+++++++...
T Consensus 7 ~~~~~~y~i~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~- 83 (276)
T 2h6d_A 7 RVKIGHYVLGDTLGVGTFG--KVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTP- 83 (276)
T ss_dssp CCEETTEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS-
T ss_pred cceeccEEEEeeecCCCCe--EEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecC-
Confidence 34456899999999998 8 9999999999999999999753211 12356788999999999999999999999863
Q ss_pred cCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEE
Q 004157 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL 170 (771)
..+|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||
T Consensus 84 -------~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~p~Nil~~~~~~~~l 152 (276)
T 2h6d_A 84 -------TDFFMVMEYVSGGELFDYICKHGR---VEEMEARRLFQQILSAVDYCHR-HMVVHRDLKPENVLLDAHMNAKI 152 (276)
T ss_dssp -------SEEEEEEECCCSCBHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHH-HCSSCCCCCGGGEEECTTSCEEE
T ss_pred -------CeEEEEEeccCCCcHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHH-CCCccCCCChhhEEECCCCCEEE
Confidence 4899999999 489999987643 2344466779999999999997 89999999999999999999999
Q ss_pred EccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh---
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--- 247 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~--- 247 (771)
+|||++........ ......+..|+|||++.+. ...+.++|+|||||++|+|++|..||......
T Consensus 153 ~dfg~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~ 220 (276)
T 2h6d_A 153 ADFGLSNMMSDGEF-------LRTSCGSPNYAAPEVISGR-----LYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLF 220 (276)
T ss_dssp CCCCGGGCCCC--------------------CCTGGGTTS-----CCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred eecccccccCCCcc-------eecccCCccccCHHHHcCC-----CCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHH
Confidence 99999987654211 1122345589999998763 22346899999999999999999888643211
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 ---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 ---------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||+.+|.+||++.++++| +||++
T Consensus 221 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h-~~~~~ 267 (276)
T 2h6d_A 221 KKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREH-EWFKQ 267 (276)
T ss_dssp HHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS-HHHHT
T ss_pred HHhhcCcccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhC-hhhcc
Confidence 113467789999999999999999999999998 55543
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-34 Score=319.16 Aligned_cols=243 Identities=14% Similarity=0.178 Sum_probs=188.5
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHH-HhcCCCCCeeEEeeeEEecccC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKR-LRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~-Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
...|++.+.||.|+ | +||+|+++.+++.|+||++.+..... .....+.+|..+ ++.++||||+++++++++.
T Consensus 37 ~~~y~~~~~lG~G~fg--~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~--- 111 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFG--KVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTA--- 111 (373)
T ss_dssp GGGEEEEEEEECCTTC--EEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECS---
T ss_pred hhheEEEEEEeeCCCe--EEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeC---
Confidence 34699999999998 8 99999999999999999998653222 234455667766 5778999999999999874
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
..+||||||| ++|..++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|
T Consensus 112 -----~~~~lv~E~~~gg~L~~~l~~~~~~---~~~~~~~~~~qi~~aL~~LH~-~givHrDlkp~NIll~~~g~ikL~D 182 (373)
T 2r5t_A 112 -----DKLYFVLDYINGGELFYHLQRERCF---LEPRARFYAAEIASALGYLHS-LNIVYRDLKPENILLDSQGHIVLTD 182 (373)
T ss_dssp -----SEEEEEEECCCSCBHHHHHHHHSSC---CHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEECTTSCEEECC
T ss_pred -----CEEEEEEeCCCCCcHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHH-CCceecCCCHHHEEECCCCCEEEee
Confidence 4899999999 4799999876432 234466679999999999997 8999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-----
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----- 247 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~----- 247 (771)
||+++....... ......++..|+|||++.+ ..++.++|+|||||++|||++|.+||......
T Consensus 183 FG~a~~~~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~ 250 (373)
T 2r5t_A 183 FGLCKENIEHNS------TTSTFCGTPEYLAPEVLHK------QPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDN 250 (373)
T ss_dssp CCBCGGGBCCCC------CCCSBSCCCCCCCHHHHTT------CCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHH
T ss_pred CccccccccCCC------ccccccCCccccCHHHhCC------CCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHH
Confidence 999986433211 1122345568999999876 46788999999999999999999998543211
Q ss_pred -------ccCCCCcchHHHHHHHhccCCCCCCCh----HHHhhCCCCCcch
Q 004157 248 -------NTASIPKSLLPDYQRLLSSMPSRRLNS----SKLIENSEYFQNK 287 (771)
Q Consensus 248 -------~~~~IP~~l~~~i~~lL~~~P~~Rps~----~~lL~~~~fF~n~ 287 (771)
....++..+.+++.+||..+|.+|+++ .++++| +||++.
T Consensus 251 i~~~~~~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h-~~f~~~ 300 (373)
T 2r5t_A 251 ILNKPLQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSH-VFFSLI 300 (373)
T ss_dssp HHHSCCCCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTS-GGGTTC
T ss_pred HHhcccCCCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCC-ccccCC
Confidence 124577889999999999999999987 577777 677653
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=320.34 Aligned_cols=243 Identities=18% Similarity=0.236 Sum_probs=187.9
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.+|++.+.||.|+ | +||+|+++.+|+.|+||++............+.+|+++++.++||||+++++++..... ..
T Consensus 25 ~~y~~~~~lG~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~--~~ 100 (371)
T 2xrw_A 25 KRYQNLKPIGSGAQG--IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKS--LE 100 (371)
T ss_dssp TTEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCS--TT
T ss_pred hheeEeeeeEecCCE--EEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccc--cc
Confidence 4799999999998 8 99999999999999999998765555566788899999999999999999999975431 01
Q ss_pred cccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
....+||||||| ++|.+.+... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 101 ~~~~~~lv~e~~~~~l~~~~~~~-----~~~~~~~~i~~qi~~al~~lH~-~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 174 (371)
T 2xrw_A 101 EFQDVYIVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLA 174 (371)
T ss_dssp TCCEEEEEEECCSEEHHHHHHSC-----CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEECTTSCEEECCCCC-
T ss_pred cccceEEEEEcCCCCHHHHHhhc-----cCHHHHHHHHHHHHHHHHHHHH-CCeecccCCHHHEEEcCCCCEEEEEeecc
Confidence 134899999999 6788887632 2344567779999999999997 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----hc----
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN---- 248 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~~---- 248 (771)
....... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||...+. ..
T Consensus 175 ~~~~~~~-------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~ 241 (371)
T 2xrw_A 175 RTAGTSF-------MMTPYVVTRYYRAPEVILG------MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 241 (371)
T ss_dssp ----------------------CTTCCHHHHTT------CCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-
T ss_pred ccccccc-------ccCCceecCCccCHHHhcC------CCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 7654321 1112344568999999876 3577899999999999999999988854221 00
Q ss_pred c----------------------CC------------------------CCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 249 T----------------------AS------------------------IPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 249 ~----------------------~~------------------------IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
. .. ++..+.+++.+||..||.+|||+.++++| +
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h-p 320 (371)
T 2xrw_A 242 LGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH-P 320 (371)
T ss_dssp CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS-H
T ss_pred hCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC-c
Confidence 0 00 03457889999999999999999999999 4
Q ss_pred CCc
Q 004157 283 YFQ 285 (771)
Q Consensus 283 fF~ 285 (771)
||+
T Consensus 321 ~~~ 323 (371)
T 2xrw_A 321 YIN 323 (371)
T ss_dssp HHH
T ss_pred chh
Confidence 553
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-34 Score=328.65 Aligned_cols=239 Identities=17% Similarity=0.200 Sum_probs=191.2
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
..|++.+.||.|+ | +||+|+++.++..|+||++.+..........+.+|+++|+.|+||||++++++++..
T Consensus 37 ~~y~~~~~lG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~------ 108 (494)
T 3lij_A 37 EMYQRVKKLGSGAYG--EVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDK------ 108 (494)
T ss_dssp HHEEEEEEEECC-----EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECS------
T ss_pred cCeEEeeEEecCCCE--EEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC------
Confidence 3699999999998 8 999999999999999999987544333456788999999999999999999999863
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCC---CcEEEEc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT---LDWKLHA 172 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~---G~~KL~d 172 (771)
..+||||||| ++|.+.+...... ....+..++.||+.||.|||+ .+++||||||+||+++.. +.+||+|
T Consensus 109 --~~~~lv~e~~~~g~L~~~~~~~~~~---~~~~~~~i~~qi~~~l~~lH~-~~ivH~Dlkp~Nil~~~~~~~~~~kl~D 182 (494)
T 3lij_A 109 --RNYYLVMECYKGGELFDEIIHRMKF---NEVDAAVIIKQVLSGVTYLHK-HNIVHRDLKPENLLLESKEKDALIKIVD 182 (494)
T ss_dssp --SEEEEEEECCCSCBHHHHHHHHSSC---CHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEESCSSTTCCEEECC
T ss_pred --CEEEEEEecCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCceeccCChhhEEEeCCCCCCcEEEEE
Confidence 4899999999 5788888765432 234456679999999999997 899999999999999764 4599999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-----
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----- 247 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~----- 247 (771)
||++........ .....++..|+|||++.+ .++.++|+|||||++|+|++|.+||......
T Consensus 183 fG~a~~~~~~~~-------~~~~~gt~~y~aPE~l~~-------~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~ 248 (494)
T 3lij_A 183 FGLSAVFENQKK-------MKERLGTAYYIAPEVLRK-------KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRK 248 (494)
T ss_dssp CTTCEECBTTBC-------BCCCCSCTTTCCHHHHTT-------CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred CCCCeECCCCcc-------ccccCCCcCeeCHHHHcc-------cCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 999987654211 122345568999999864 4667999999999999999999998643211
Q ss_pred -----------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 -----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 -----------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....++..+.+++++||..+|.+||++.++|+| +||+.
T Consensus 249 i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h-p~~~~ 297 (494)
T 3lij_A 249 VEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH-PWIKE 297 (494)
T ss_dssp HHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC-HHHHH
T ss_pred HHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcC-ccccc
Confidence 114578889999999999999999999999998 55544
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-34 Score=313.85 Aligned_cols=244 Identities=17% Similarity=0.257 Sum_probs=196.0
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc------hhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEec
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ------DGHLAAARNGVKRLRTV-RHPNILAFLHSTEVE 91 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~------~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e 91 (771)
+|++.+.||.|+ | +||+|+++.+|+.|+||++...... +...+.+.+|+.+++++ +||||++++++++..
T Consensus 95 ~y~~~~~lg~G~~g--~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 172 (365)
T 2y7j_A 95 KYDPKDVIGRGVSS--VVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESS 172 (365)
T ss_dssp HEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBS
T ss_pred hcccceEEecCCCE--EEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeC
Confidence 588999999997 7 9999999999999999999865321 13356788999999999 799999999999863
Q ss_pred ccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEE
Q 004157 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWK 169 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~K 169 (771)
..+|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .|++||||||+||+++.+|.+|
T Consensus 173 --------~~~~lv~e~~~g~~L~~~l~~~~~---l~~~~~~~i~~qi~~~L~~LH~-~gi~H~Dlkp~NIl~~~~~~ik 240 (365)
T 2y7j_A 173 --------SFMFLVFDLMRKGELFDYLTEKVA---LSEKETRSIMRSLLEAVSFLHA-NNIVHRDLKPENILLDDNMQIR 240 (365)
T ss_dssp --------SEEEEEECCCTTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEECTTCCEE
T ss_pred --------CEEEEEEEeCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEECCCCCEE
Confidence 4899999999 479999987543 2344466679999999999997 8999999999999999999999
Q ss_pred EEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh---
Q 004157 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--- 246 (771)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l--- 246 (771)
|+|||++........ .....++..|+|||++.+........++.++|+|||||++|+|++|..||.....
T Consensus 241 l~DfG~~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~ 313 (365)
T 2y7j_A 241 LSDFGFSCHLEPGEK-------LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILM 313 (365)
T ss_dssp ECCCTTCEECCTTCC-------BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred EEecCcccccCCCcc-------cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHH
Confidence 999999987654211 1122344589999998754322223567899999999999999999998854211
Q ss_pred -h------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 247 -R------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 247 -~------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
. ....++..+.+++.+||..+|.+||++.++++| +||+
T Consensus 314 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h-p~f~ 364 (365)
T 2y7j_A 314 LRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQH-PFFE 364 (365)
T ss_dssp HHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS-GGGC
T ss_pred HHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC-cccC
Confidence 0 113567779999999999999999999999999 5553
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=317.45 Aligned_cols=244 Identities=16% Similarity=0.189 Sum_probs=198.2
Q ss_pred CCCCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecc
Q 004157 14 AGVKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (771)
Q Consensus 14 ~~~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~ 92 (771)
+.+...+|++.+.||.|+ | +||+|+++.+|..|+||++.... .......+.+|+++++.++||||+++++++..+
T Consensus 28 ~~~~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~- 103 (360)
T 3eqc_A 28 GELKDDDFEKISELGAGNGG--VVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD- 103 (360)
T ss_dssp CCCCGGGEEEEEEEEECSSC--EEEEEEETTTCCEEEEEEEECCC-CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEET-
T ss_pred cccccccceeeeeecCCCCe--EEEEEEECCCCcEEEEEEecccc-CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEEC-
Confidence 345567899999999998 8 99999999999999999998653 334567789999999999999999999999874
Q ss_pred cCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEE
Q 004157 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL 170 (771)
..+||||||+ ++|.++++..... ....+..++.||+.||.|||+.++++||||||+||+++.+|.+||
T Consensus 104 -------~~~~lv~e~~~~~~L~~~l~~~~~~---~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl 173 (360)
T 3eqc_A 104 -------GEISICMEHMDGGSLDQVLKKAGRI---PEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKL 173 (360)
T ss_dssp -------TEEEEEECCCTTCBHHHHHHHHSSC---CHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEE
T ss_pred -------CEEEEEEECCCCCCHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEE
Confidence 4899999999 4899999876432 344466679999999999997348999999999999999999999
Q ss_pred EccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc--
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN-- 248 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~-- 248 (771)
+|||++....... .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||.......
T Consensus 174 ~Dfg~~~~~~~~~--------~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~ 239 (360)
T 3eqc_A 174 CDFGVSGQLIDSM--------ANSFVGTRSYMSPERLQG------THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELE 239 (360)
T ss_dssp CCCCCCHHHHHHC------------CCCCTTCCHHHHTT------CCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHH
T ss_pred EECCCCccccccc--------ccCCCCCCCeECHHHHcC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 9999987553210 112234568999999876 357789999999999999999998875321100
Q ss_pred ------------------------------------------------------cCCCCcchHHHHHHHhccCCCCCCCh
Q 004157 249 ------------------------------------------------------TASIPKSLLPDYQRLLSSMPSRRLNS 274 (771)
Q Consensus 249 ------------------------------------------------------~~~IP~~l~~~i~~lL~~~P~~Rps~ 274 (771)
...++..+.+++.+||..+|.+||++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 319 (360)
T 3eqc_A 240 LMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADL 319 (360)
T ss_dssp HHHC------------------------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCH
T ss_pred HHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCH
Confidence 01356778999999999999999999
Q ss_pred HHHhhCCCCCcc
Q 004157 275 SKLIENSEYFQN 286 (771)
Q Consensus 275 ~~lL~~~~fF~n 286 (771)
.++++| +||+.
T Consensus 320 ~ell~h-p~~~~ 330 (360)
T 3eqc_A 320 KQLMVH-AFIKR 330 (360)
T ss_dssp HHHHTS-HHHHH
T ss_pred HHHhhC-hHhhc
Confidence 999998 56654
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=302.83 Aligned_cols=241 Identities=16% Similarity=0.206 Sum_probs=192.1
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
..+|++++.||.|+ | +||+|+++.+++.|+||++... .....+.+.+|++++++|+||||+++++++..+
T Consensus 9 ~~~~~~~~~lG~G~~g--~V~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~----- 79 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFG--QAIKVTHRETGEVMVMKELIRF--DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKD----- 79 (310)
T ss_dssp GGGEEEEEEEECCSSE--EEEEEEETTTCCEEEEEEESCC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEET-----
T ss_pred hhHeeccceecCCCCE--EEEEEEECCCCcEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecC-----
Confidence 34699999999998 8 9999999999999999998642 344567889999999999999999999999864
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+|+||||+ ++|.++++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 80 ---~~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~i~~qi~~al~~lH~-~~ivH~dlkp~Nil~~~~~~~kl~Dfg 153 (310)
T 3s95_A 80 ---KRLNFITEYIKGGTLRGIIKSMDSQ--YPWSQRVSFAKDIASGMAYLHS-MNIIHRDLNSHNCLVRENKNVVVADFG 153 (310)
T ss_dssp ---TEEEEEEECCTTCBHHHHHHHCCTT--SCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSTTSEEECTTSCEEECCCT
T ss_pred ---CeeEEEEEecCCCcHHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHh-CCccCCCCCcCeEEECCCCCEEEeecc
Confidence 4899999999 4899999874321 2334456679999999999997 899999999999999999999999999
Q ss_pred cccccCCCCCCCCC--------CccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh
Q 004157 175 VLSEFDGNNEAANG--------PMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL 246 (771)
Q Consensus 175 la~~~~~~~~~~~~--------~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l 246 (771)
++............ ....+...++..|+|||++.+ ..++.++|+|||||++|+|++|..++.....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~~g~~~~~~~~~ 227 (310)
T 3s95_A 154 LARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMING------RSYDEKVDVFSFGIVLCEIIGRVNADPDYLP 227 (310)
T ss_dssp TCEECC--------------------CCCCSCGGGCCHHHHTT------CCCCTHHHHHHHHHHHHHHHHTCCSSTTTSC
T ss_pred cceecccccccccccccccccccccccccCCCcceeCHHHhcC------CCCCcHHHHHHHHHHHHHHhcCCCCCcchhh
Confidence 99876543221100 000112334558999999876 4677899999999999999999877643211
Q ss_pred ---------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 247 ---------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 247 ---------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.....+|..+.+++.+||+.+|.+||++.++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~ 275 (310)
T 3s95_A 228 RTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEH 275 (310)
T ss_dssp BCTTSSBCHHHHHHHTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hHHHHhhhhhccccccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 113578899999999999999999999999875
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-34 Score=302.57 Aligned_cols=244 Identities=14% Similarity=0.181 Sum_probs=194.6
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.||.|+ | +||+|+++.+|+.|+||++...... ...+.+++|++.++.++||||+++++++...
T Consensus 8 ~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------- 77 (276)
T 2yex_A 8 DWDLVQTLGEGAYG--EVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFYGHRREG------- 77 (276)
T ss_dssp HEEEEEEEEECSSS--EEEEEEETTTCCEEEEEEEEGGGCT-THHHHHHHHHHHHHTCCCTTBCCEEEEEEET-------
T ss_pred ceEEEEEeecCCCc--EEEEEEECCCCcEEEEEEeeeccch-hhhHHHHHHHHHHHhcCCCCceeeeeEEEcC-------
Confidence 599999999998 8 9999999999999999999864332 3456788999999999999999999999863
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 78 -~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 152 (276)
T 2yex_A 78 -NIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMAGVVYLHG-IGITHRDIKPENLLLDERDNLKISDFGLA 152 (276)
T ss_dssp -TEEEEEEECCTTEEGGGGSBTTTB---CCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred -CEEEEEEEecCCCcHHHHHhhccC---CCHHHHHHHHHHHHHHHHHHHh-CCeeccCCChHHEEEccCCCEEEeeCCCc
Confidence 4889999999 478887754322 2344567779999999999997 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL---------- 246 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l---------- 246 (771)
.......... ......++..|+|||++.+. ..++.++|+|||||++|+|++|..||.....
T Consensus 153 ~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 223 (276)
T 2yex_A 153 TVFRYNNRER----LLNKMCGTLPYVAPELLKRR-----EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE 223 (276)
T ss_dssp EECEETTEEC----CBCCCCSCGGGCCGGGGTCS-----SBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHT
T ss_pred cccCCCcchh----cccCCccccCccChHHHhcC-----CCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhh
Confidence 7654321100 01112334589999998753 1235689999999999999999988853211
Q ss_pred -----hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcchh
Q 004157 247 -----RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKL 288 (771)
Q Consensus 247 -----~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n~l 288 (771)
.....++..+.+++.+||+.+|.+||++.++++| +||++.+
T Consensus 224 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~-~~~~~~~ 269 (276)
T 2yex_A 224 KKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD-RWYNKPL 269 (276)
T ss_dssp TCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC-TTTTCCC
T ss_pred cccccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC-ccccChh
Confidence 1123578889999999999999999999999998 6666543
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-34 Score=316.90 Aligned_cols=242 Identities=17% Similarity=0.256 Sum_probs=192.4
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
..|.+.+.||.|+ | +||+|+++.+|+.|+||++......+.....+.+|+++++.++||||+++++++...+.. .
T Consensus 42 ~~y~~~~~lG~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~--~ 117 (371)
T 4exu_A 42 KTYVSPTHVGSGAYG--SVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSL--R 117 (371)
T ss_dssp TTEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSS--T
T ss_pred ccEEEEeEEecCCCe--EEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCc--c
Confidence 4799999999998 8 999999999999999999987665666677889999999999999999999999764311 0
Q ss_pred cccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
....+|+||||+ ++|.+.+... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 118 ~~~~~~lv~e~~~~~l~~~~~~~-----~~~~~~~~i~~qi~~aL~~LH~-~~ivH~Dikp~NIll~~~~~~kL~Dfg~a 191 (371)
T 4exu_A 118 NFYDFYLVMPFMQTDLQKIMGME-----FSEEKIQYLVYQMLKGLKYIHS-AGVVHRDLKPGNLAVNEDCELKILDFGLA 191 (371)
T ss_dssp TCCCCEEEEECCCEEHHHHTTSC-----CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEECTTCCEEECSTTCC
T ss_pred cceeEEEEEccccccHHHHhhcC-----CCHHHHHHHHHHHHHHHHHHHH-CCCcCCCcCHHHeEECCCCCEEEEecCcc
Confidence 012359999999 5677666322 2345567779999999999997 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh---------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--------- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~--------- 247 (771)
...... .....++..|+|||++.+. ..++.++|+|||||++|+|++|..||......
T Consensus 192 ~~~~~~---------~~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~ 257 (371)
T 4exu_A 192 RHADAE---------MTGYVVTRWYRAPEVILSW-----MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKV 257 (371)
T ss_dssp -----------------CTTCCCTTSCHHHHSCC-----SCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred cccccC---------cCCcccCccccCHHHhcCC-----CCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence 765432 1122345689999998753 35678999999999999999999988642200
Q ss_pred ----------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 ----------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 ----------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
....++..+.+++.+||..+|.+||++.++++| +||+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h-p~f~ 328 (371)
T 4exu_A 258 TGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH-PFFE 328 (371)
T ss_dssp HCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS-GGGT
T ss_pred hCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC-cccc
Confidence 012457789999999999999999999999999 5664
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=317.07 Aligned_cols=235 Identities=18% Similarity=0.228 Sum_probs=179.6
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|++.+.||.|+ | +||+|+++.+++.|+||++.... ..+.+++|+++|++|+||||++++++++..
T Consensus 54 ~y~~~~~lG~G~~g--~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------- 120 (349)
T 2w4o_A 54 FFEVESELGRGATS--IVYRCKQKGTQKPYALKVLKKTV----DKKIVRTEIGVLLRLSHPNIIKLKEIFETP------- 120 (349)
T ss_dssp TEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEC--------------CHHHHHCCCTTBCCEEEEEECS-------
T ss_pred cEEEeeEEeeCCCE--EEEEEEECCCCcEEEEEEeccch----hHHHHHHHHHHHHhCCCCCCcceeeeEecC-------
Confidence 599999999998 8 99999999999999999998642 234678899999999999999999999863
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC---CCcEEEEcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ---TLDWKLHAF 173 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~---~G~~KL~dF 173 (771)
..+||||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++. +|.+||+||
T Consensus 121 -~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~L~~LH~-~~ivH~Dikp~NIll~~~~~~~~~kl~Df 195 (349)
T 2w4o_A 121 -TEISLVLELVTGGELFDRIVEKGY---YSERDAADAVKQILEAVAYLHE-NGIVHRDLKPENLLYATPAPDAPLKIADF 195 (349)
T ss_dssp -SEEEEEECCCCSCBHHHHHTTCSS---CCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEESSSSTTCCEEECCC
T ss_pred -CeEEEEEEeCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeEecCCCcccEEEecCCCCCCEEEccC
Confidence 4899999999 579988876543 2344566779999999999997 89999999999999976 899999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-----hc
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-----RN 248 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-----~~ 248 (771)
|++........ .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||..... ..
T Consensus 196 g~a~~~~~~~~-------~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~ 262 (349)
T 2w4o_A 196 GLSKIVEHQVL-------MKTVCGTPGYCAPEILRG------CAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRR 262 (349)
T ss_dssp C-----------------------CGGGSCHHHHTT------CCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHH
T ss_pred ccccccCcccc-------cccccCCCCccCHHHhcC------CCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHH
Confidence 99986543210 112234558999999876 3577899999999999999999988743211 00
Q ss_pred ------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 249 ------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 249 ------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
...++..+.+++.+||..+|.+||++.++++| +||..
T Consensus 263 i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h-p~~~~ 311 (349)
T 2w4o_A 263 ILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH-PWVTG 311 (349)
T ss_dssp HHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS-TTTTS
T ss_pred HHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC-cccCC
Confidence 13567789999999999999999999999999 55543
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=302.68 Aligned_cols=239 Identities=15% Similarity=0.217 Sum_probs=190.0
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
....|++.+.||.|+ | +||+|+++.+|+.|+||++..... ...+.+|+++++.++||||+++++++...
T Consensus 27 ~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---- 96 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYG--SVYKAIHKETGQIVAIKQVPVESD----LQEIIKEISIMQQCDSPHVVKYYGSYFKN---- 96 (314)
T ss_dssp ---CEEEEEECC----C--EEEEEEETTTCCEEEEEEEETTSC----CHHHHHHHHHHHTCCCTTBCCEEEEEEET----
T ss_pred chhhhhhheeeccCCCe--EEEEEEECCCCCEEEEEecCchHH----HHHHHHHHHHHHhCCCCCCccEEEEEEeC----
Confidence 456799999999998 8 999999999999999999986432 34578899999999999999999999863
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+||
T Consensus 97 ----~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~-~~i~H~dl~p~Nil~~~~~~~kl~df 169 (314)
T 3com_A 97 ----TDLWIVMEYCGAGSVSDIIRLRNK--TLTEDEIATILQSTLKGLEYLHF-MRKIHRDIKAGNILLNTEGHAKLADF 169 (314)
T ss_dssp ----TEEEEEEECCTTEEHHHHHHHHTC--CCCHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEECTTCCEEECCC
T ss_pred ----CEEEEEeecCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHh-CCCcCCCcCHHHEEECCCCCEEEeec
Confidence 4899999999 479999875432 12344567779999999999997 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------- 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l------- 246 (771)
|++......... .....+...|+|||++.+ ..++.++|+|||||++|+|++|..||.....
T Consensus 170 g~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~ 237 (314)
T 3com_A 170 GVAGQLTDTMAK------RNTVIGTPFWMAPEVIQE------IGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMI 237 (314)
T ss_dssp TTCEECBTTBSC------BCCCCSCGGGCCHHHHSS------SCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH
T ss_pred ccchhhhhhccc------cCccCCCCCccChhhcCC------CCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence 999776542110 112234458999999876 3567899999999999999999988854211
Q ss_pred --------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 247 --------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 247 --------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
.....+|..+.+++.+||..+|.+||++.++++| +||+
T Consensus 238 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~-~~~~ 283 (314)
T 3com_A 238 PTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQH-PFVR 283 (314)
T ss_dssp HHSCCCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS-HHHH
T ss_pred hcCCCcccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhC-HHHh
Confidence 0112357789999999999999999999999998 4553
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-34 Score=318.46 Aligned_cols=239 Identities=15% Similarity=0.224 Sum_probs=194.8
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
..|++.+.||.|+ | +||+|+++.+|+.|++|++..... .....+++|+++|+.|+||||++++++++..
T Consensus 51 ~~y~i~~~LG~G~~g--~Vy~~~~~~~~~~~a~K~~~~~~~--~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~------ 120 (387)
T 1kob_A 51 DYYDILEELGSGAFG--VVHRCVEKATGRVFVAKFINTPYP--LDKYTVKNEISIMNQLHHPKLINLHDAFEDK------ 120 (387)
T ss_dssp GTEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEECCSH--HHHHHHHHHHHHHTTCCSTTBCCEEEEEECS------
T ss_pred cceEEEEEEecCCCE--EEEEEEECCCCCEEEEEEecccch--hhHHHHHHHHHHHHhCCCcCCCeEEEEEEeC------
Confidence 3699999999998 8 999999999999999999986432 2345788999999999999999999999863
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC--CCcEEEEcc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ--TLDWKLHAF 173 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~--~G~~KL~dF 173 (771)
..+||||||| ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++. .+.+||+||
T Consensus 121 --~~~~lv~E~~~gg~L~~~l~~~~~--~l~~~~~~~i~~qi~~aL~~LH~-~givHrDlkp~NIll~~~~~~~vkL~DF 195 (387)
T 1kob_A 121 --YEMVLILEFLSGGELFDRIAAEDY--KMSEAEVINYMRQACEGLKHMHE-HSIVHLDIKPENIMCETKKASSVKIIDF 195 (387)
T ss_dssp --SEEEEEEECCCCCBHHHHTTCTTC--CBCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEESSTTCCCEEECCC
T ss_pred --CEEEEEEEcCCCCcHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHh-CCeeecccchHHeEEecCCCCceEEEec
Confidence 4899999999 579888865431 12344566779999999999997 89999999999999974 577999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h--
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R-- 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~-- 247 (771)
|++........ .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||..... .
T Consensus 196 G~a~~~~~~~~-------~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i 262 (387)
T 1kob_A 196 GLATKLNPDEI-------VKVTTATAEFAAPEIVDR------EPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNV 262 (387)
T ss_dssp TTCEECCTTSC-------EEEECSSGGGCCHHHHTT------CCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHH
T ss_pred ccceecCCCcc-------eeeeccCCCccCchhccC------CCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 99987654211 112234558999999876 3567899999999999999999998864321 0
Q ss_pred ----------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 ----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 ----------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||..+|.+||++.++++| +||++
T Consensus 263 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h-p~~~~ 310 (387)
T 1kob_A 263 KRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH-PWLKG 310 (387)
T ss_dssp HHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS-TTTSS
T ss_pred HhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC-ccccC
Confidence 113578889999999999999999999999999 56654
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-34 Score=319.14 Aligned_cols=245 Identities=18% Similarity=0.249 Sum_probs=180.0
Q ss_pred Ccee-cCCCCCCC-CceEEEEeEEC--CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 20 PYNI-GDPYPSAW-GSWSHFQGTSK--DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 20 ~Y~i-~e~ig~G~-g~wtVy~g~~k--~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
.|++ +++||.|+ | +||+|+++ .++..||||++...... ..+.+|+++|++|+||||+++++++....
T Consensus 21 ~y~~~g~~lG~G~~g--~Vy~~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~hpniv~~~~~~~~~~--- 91 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYG--HVYKAKRKDGKDDKDYALKQIEGTGIS----MSACREIALLRELKHPNVISLQKVFLSHA--- 91 (405)
T ss_dssp HEECSSCCCC-------EEEEEEESSSSCCCCEEEEECSSSSCC----HHHHHHHHHHHHCCCTTBCCCCEEEEETT---
T ss_pred hhhhcCcEeeecCCe--EEEEEEEccCCCCeEEEEEEECCCCCC----HHHHHHHHHHHhcCCCCeeeEeeEEecCC---
Confidence 4776 66899998 8 99999977 46889999999754332 35778999999999999999999997644
Q ss_pred CCcccEEEEEecCC-cchHHHHHHhCC------CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEE----cC
Q 004157 96 TSTKITIYIVTEPV-MPLSEKIKELGL------EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV----TQ 164 (771)
Q Consensus 96 ~~~~~~iyIVtE~v-~~L~~~L~~~~~------~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v----~~ 164 (771)
...+||||||+ ++|.+++..... ........++.+++||+.||.|||+ .+|+||||||+||+| +.
T Consensus 92 ---~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~-~~ivH~Dlkp~NIll~~~~~~ 167 (405)
T 3rgf_A 92 ---DRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA-NWVLHRDLKPANILVMGEGPE 167 (405)
T ss_dssp ---TTEEEEEEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEECCSSTT
T ss_pred ---CCeEEEEEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHh-CCEeCCCcCHHHeEEecCCCC
Confidence 34899999999 678887764321 1113344567779999999999997 899999999999999 67
Q ss_pred CCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh
Q 004157 165 TLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE 244 (771)
Q Consensus 165 ~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~ 244 (771)
+|.+||+|||+++........ ........++..|+|||++.+. ..++.++|||||||++|+|++|.+||...
T Consensus 168 ~~~~kl~Dfg~a~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 168 RGRVKIADMGFARLFNSPLKP---LADLDPVVVTFWYRAPELLLGA-----RHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp TTCEEECCTTCCC-------------------CCCTTCCHHHHTTC-----CSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred CCcEEEEECCCceecCCCCcc---cccCCCceecCcccCchhhcCC-----CcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 899999999999876542110 0011223445689999998763 34778999999999999999999988421
Q ss_pred hh-------------h---------------cc-------------------------------CCCCcchHHHHHHHhc
Q 004157 245 EL-------------R---------------NT-------------------------------ASIPKSLLPDYQRLLS 265 (771)
Q Consensus 245 ~l-------------~---------------~~-------------------------------~~IP~~l~~~i~~lL~ 265 (771)
.. . .+ ...+..+.+++.+||.
T Consensus 240 ~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~ 319 (405)
T 3rgf_A 240 QEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLT 319 (405)
T ss_dssp C------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSC
T ss_pred cccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHcc
Confidence 10 0 00 1126678899999999
Q ss_pred cCCCCCCChHHHhhCCCCCcc
Q 004157 266 SMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 266 ~~P~~Rps~~~lL~~~~fF~n 286 (771)
.||.+|||+.++|+| +||..
T Consensus 320 ~dP~~R~ta~e~L~h-p~f~~ 339 (405)
T 3rgf_A 320 MDPIKRITSEQAMQD-PYFLE 339 (405)
T ss_dssp SSGGGSCCHHHHHTS-GGGTS
T ss_pred CCcccCCCHHHHhcC-hhhcc
Confidence 999999999999999 55543
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-34 Score=305.54 Aligned_cols=248 Identities=15% Similarity=0.212 Sum_probs=193.9
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc--hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ--DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~--~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
.+|++++.||.|+ | .||+|.++.+++.|+||++...... ......+.+|++.++.|+||||+++++++..+.
T Consensus 5 ~~y~i~~~lg~G~~g--~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--- 79 (305)
T 2wtk_C 5 GKYLMGDLLGEGSYG--KVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEE--- 79 (305)
T ss_dssp CCBCCCCEEEECSSC--EEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC----
T ss_pred cceeEeeEEecCCCe--EEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC---
Confidence 4699999999998 8 9999999999999999999753211 134567889999999999999999999986443
Q ss_pred CCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 96 ~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
...+||||||+ ++|.+++...... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 80 ---~~~~~lv~e~~~~~l~~~~~~~~~~-~~~~~~~~~~~~qi~~al~~LH~-~~i~H~dlkp~NIl~~~~~~~kl~dfg 154 (305)
T 2wtk_C 80 ---KQKMYMVMEYCVCGMQEMLDSVPEK-RFPVCQAHGYFCQLIDGLEYLHS-QGIVHKDIKPGNLLLTTGGTLKISALG 154 (305)
T ss_dssp -----CEEEEEECCSEEHHHHHHHSTTC-SCCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEECTTCCEEECCCT
T ss_pred ---CCeEEEEehhccCCHHHHHHhCccc-ccCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCcccEEEcCCCcEEeeccc
Confidence 34799999999 5688887764322 22344566779999999999997 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------- 247 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------- 247 (771)
++......... .......++..|+|||++.+. ...++.++|+|||||++|+|++|..||......
T Consensus 155 ~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~----~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~ 226 (305)
T 2wtk_C 155 VAEALHPFAAD----DTCRTSQGSPAFQPPEIANGL----DTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIG 226 (305)
T ss_dssp TCEECCTTCSS----CEECCCCSCGGGCCHHHHTCC----SCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred cccccCccccc----cccccCCCCCCCcChhhccCc----ccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHh
Confidence 99876532111 011122344589999998652 012356899999999999999999988653321
Q ss_pred -----ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 -----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 -----~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
....++..+.+++.+||..+|.+||++.++++| +||+
T Consensus 227 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~-~~~~ 268 (305)
T 2wtk_C 227 KGSYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH-SWFR 268 (305)
T ss_dssp HCCCCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS-HHHH
T ss_pred cCCCCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC-cccc
Confidence 123567789999999999999999999999998 4443
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-34 Score=304.61 Aligned_cols=243 Identities=18% Similarity=0.269 Sum_probs=197.7
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
...+|++++.||.|+ | +||+|.++.+++.|++|++..... .....+.+.+|+++++.++||||++++++++..
T Consensus 13 ~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--- 87 (294)
T 2rku_A 13 SRRRYVRGRFLGKGGFA--KCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDN--- 87 (294)
T ss_dssp TTEEEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS---
T ss_pred cccceEEEEEEeecCCE--EEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccC---
Confidence 345799999999998 8 999999999999999999986532 234567788999999999999999999999863
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
..+|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|
T Consensus 88 -----~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~i~~qi~~~l~~lH~-~~i~H~dl~p~Nil~~~~~~~kl~d 158 (294)
T 2rku_A 88 -----DFVFVVLELCRRRSLLELHKRRKA---LTEPEARYYLRQIVLGCQYLHR-NRVIHRDLKLGNLFLNEDLEVKIGD 158 (294)
T ss_dssp -----SEEEEEEECCTTCBHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEECTTCCEEECC
T ss_pred -----CEEEEEEecCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCccccCCChHhEEEcCCCCEEEEe
Confidence 4899999999 478888877543 2344466779999999999997 8999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-----
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----- 247 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~----- 247 (771)
||++......... .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 159 fg~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~ 226 (294)
T 2rku_A 159 FGLATKVEYDGER------KKVLCGTPNYIAPEVLSK------KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLR 226 (294)
T ss_dssp CTTCEECCSTTCC------BCCCCSCCSSCCHHHHTT------SCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH
T ss_pred ccCceecccCccc------cccccCCCCcCCcchhcc------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 9999876532111 111234558999999876 35678999999999999999999988643211
Q ss_pred -------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 -------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 -------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||+.+|.+||++.++++| +||.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~-~~~~~ 271 (294)
T 2rku_A 227 IKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLND-EFFTS 271 (294)
T ss_dssp HHTTCCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS-HHHHT
T ss_pred HhhccCCCccccCHHHHHHHHHHcccChhhCcCHHHHhhC-hheec
Confidence 123566778999999999999999999999998 45543
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-34 Score=319.48 Aligned_cols=244 Identities=16% Similarity=0.263 Sum_probs=189.4
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
..|++.+.||.|+ | +||+|+++.+|+.|+||++..... ...+|+++|+.|+||||+++++++...... .
T Consensus 54 ~~y~~~~~lG~G~fg--~Vy~~~~~~~~~~vaiK~~~~~~~------~~~~E~~il~~l~hpniv~l~~~~~~~~~~--~ 123 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFG--VVYQAKLCDSGELVAIKKVLQDKR------FKNRELQIMRKLDHCNIVRLRYFFYSSGEK--K 123 (420)
T ss_dssp EEEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHHTCCCTTBCCEEEEEEEEETT--T
T ss_pred ceEEeeeEEeeCCCE--EEEEEEECCCCcEEEEEEecccch------hHHHHHHHHHHcCCCCccceeeEEeccCCC--C
Confidence 4699999999998 8 999999999999999999975421 234699999999999999999998653211 0
Q ss_pred cccEEEEEecCC-cchHHHHHHhC-CCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCC-CcEEEEccC
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELG-LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT-LDWKLHAFD 174 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~-~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~-G~~KL~dFg 174 (771)
...++|+||||+ +.|...+.... .........++.+++||+.||.|||+ .+|+||||||+||+|+.+ +.+||+|||
T Consensus 124 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~ivHrDlkp~NILl~~~~~~~kl~DFG 202 (420)
T 1j1b_A 124 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFG 202 (420)
T ss_dssp TEEEEEEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT-TTEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred cceeEEeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCChhhEEEeCCCCeEEeccch
Confidence 134678999999 56766665421 11223345567779999999999996 999999999999999965 668999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----hhc--
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LRN-- 248 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----l~~-- 248 (771)
+++....... .....++..|+|||++.+. ..++.++|+|||||++|||++|.+||.... +..
T Consensus 203 ~a~~~~~~~~-------~~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~ 270 (420)
T 1j1b_A 203 SAKQLVRGEP-------NVSYICSRYYRAPELIFGA-----TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 270 (420)
T ss_dssp TCEECCTTCC-------CCSCCSCTTSCCHHHHTTC-----SSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred hhhhcccCCC-------ceeeeeCCCcCCHHHHcCC-----CCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9987644211 1123456689999998653 357789999999999999999999885421 100
Q ss_pred -----------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 249 -----------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 249 -----------------------------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
...+|..+.+++.+||..+|.+||++.++++| +||+.
T Consensus 271 ~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h-p~f~~ 342 (420)
T 1j1b_A 271 KVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH-SFFDE 342 (420)
T ss_dssp HHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS-GGGGG
T ss_pred HHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC-Hhhcc
Confidence 02346779999999999999999999999998 56643
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-34 Score=310.45 Aligned_cols=247 Identities=14% Similarity=0.185 Sum_probs=192.5
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
...+|++++.||.|+ | +||+|+++.+|+.|+||++...... ...+.+.+|+++|++|+||||+++++++....
T Consensus 7 ~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--- 80 (319)
T 4euu_A 7 SNHLWLLSDILGQGATA--NVFRGRHKKTGDLFAIKVFNNISFL-RPVDVQMREFEVLKKLNHKNIVKLFAIEEETT--- 80 (319)
T ss_dssp SSEEEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEECGGGGG-SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTT---
T ss_pred CCCCEEEEEEecCCCCe--EEEEEEECCCCcEEEEEEecccccc-chHHHHHHHHHHHHhcCCCCcceEEEEeecCC---
Confidence 356799999999998 8 9999999999999999999753222 23556789999999999999999999998654
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEE----cCCCcEE
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV----TQTLDWK 169 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v----~~~G~~K 169 (771)
...+||||||+ ++|.+++.............+..++.||+.||.|||+ .+++||||||+||++ +..+.+|
T Consensus 81 ---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~-~~ivH~Dlkp~NIll~~~~~~~~~~k 156 (319)
T 4euu_A 81 ---TRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE-NGIVHRNIKPGNIMRVIGEDGQSVYK 156 (319)
T ss_dssp ---TCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEEEECTTSCEEEE
T ss_pred ---CceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHH-CCEecCCCCHHHEEEeccCCCCceEE
Confidence 34789999999 5899999875433223455567779999999999997 899999999999999 7888899
Q ss_pred EEccCcccccCCCCCCCCCCccccccccCCCCCChhcccccccc--ccCCCCCcchHHHHHHHHHHHhhCCCCCChhh--
Q 004157 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTA--VRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-- 245 (771)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~--~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-- 245 (771)
|+|||++........ .....++..|+|||++...... ....++.++|+|||||++|||++|..||....
T Consensus 157 L~Dfg~a~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~ 229 (319)
T 4euu_A 157 LTDFGAARELEDDEQ-------FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGP 229 (319)
T ss_dssp ECCCTTCEECCTTCC-------BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCG
T ss_pred EccCCCceecCCCCc-------eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcc
Confidence 999999987654321 1122345589999997531000 01356789999999999999999998874211
Q ss_pred ------hhc----c-----------------------------CCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 246 ------LRN----T-----------------------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 246 ------l~~----~-----------------------------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
+.. . ..++..+.+++.+||..||.+||++.++|+|
T Consensus 230 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h 303 (319)
T 4euu_A 230 RRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAE 303 (319)
T ss_dssp GGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHH
T ss_pred chhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhc
Confidence 000 0 0122357788899999999999999999997
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-34 Score=309.34 Aligned_cols=252 Identities=19% Similarity=0.303 Sum_probs=195.6
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
..+|++++.||.|+ | +||+|+++.+|+.|+||++... ........+.+|+++++.|+||||+++++++..+...
T Consensus 10 ~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~-- 84 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYG--VVCSATHKPTGEIVAIKKIEPF-DKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFE-- 84 (353)
T ss_dssp CTTEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEECCC-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCST--
T ss_pred ccceEEeeEEcCCCCe--EEEEEEECCCCcEEEEEeeccc-ccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccC--
Confidence 46799999999998 8 9999999999999999999753 2334456778999999999999999999987653211
Q ss_pred CcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 97 ~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
....+|+||||+ ++|.+++....+ ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 85 -~~~~~~lv~e~~~~~L~~~~~~~~~----~~~~~~~~~~qi~~~L~~LH~-~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 158 (353)
T 2b9h_A 85 -NFNEVYIIQELMQTDLHRVISTQML----SDDHIQYFIYQTLRAVKVLHG-SNVIHRDLKPSNLLINSNCDLKVCDFGL 158 (353)
T ss_dssp -TCCCEEEEECCCSEEHHHHHHHCCC----CHHHHHHHHHHHHHHHHHHHH-TTEECSCCCGGGEEECTTCCEEECCCTT
T ss_pred -ccceEEEEEeccCccHHHHHhhcCC----CHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeEEcCCCcEEEEeccc
Confidence 134789999999 679988887432 344566779999999999997 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCc----cccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh----
Q 004157 176 LSEFDGNNEAANGPM----LQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~----~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~---- 247 (771)
+.............. ......++..|+|||++.+. ..++.++|+|||||++|+|++|.+||......
T Consensus 159 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~ 233 (353)
T 2b9h_A 159 ARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTS-----AKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLL 233 (353)
T ss_dssp CEECC----------------CCCCCCGGGCCHHHHHSC-----CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred ccccccccccccCccccccchhhccccccccCCeeeccC-----CCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHH
Confidence 987654321111000 01122344589999987543 35678999999999999999999888543210
Q ss_pred ----------------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 ----------------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 ----------------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||..+|.+||++.++++| +||++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h-p~~~~ 311 (353)
T 2b9h_A 234 LIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH-PYLQT 311 (353)
T ss_dssp HHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS-GGGTT
T ss_pred HHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC-ccccc
Confidence 013567788999999999999999999999998 55543
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-34 Score=308.78 Aligned_cols=234 Identities=21% Similarity=0.285 Sum_probs=174.8
Q ss_pred Cceec---CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccC
Q 004157 20 PYNIG---DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENID 94 (771)
Q Consensus 20 ~Y~i~---e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d 94 (771)
+|++. +.||.|+ | +||+|+++.+|+.|+||++... ....+.+|++.++.++ ||||++++++++++
T Consensus 9 ~y~~~~~~~~lG~G~~g--~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~--- 78 (325)
T 3kn6_A 9 HYDLDLKDKPLGEGSFS--ICRKCVHKKSNQAFAVKIISKR-----MEANTQKEITALKLCEGHPNIVKLHEVFHDQ--- 78 (325)
T ss_dssp HEEECTTSCCSEEETTE--EEEEEEETTTCCEEEEEEEEGG-----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECS---
T ss_pred ccccccCCCccccCCCe--EEEEEEECCCCCEEEEEEEChh-----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcC---
Confidence 46664 6799998 8 9999999999999999999753 3456778999999998 99999999999863
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC---cEE
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL---DWK 169 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G---~~K 169 (771)
..+||||||| ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.++ .+|
T Consensus 79 -----~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~LH~-~~ivH~Dlkp~NIll~~~~~~~~~k 149 (325)
T 3kn6_A 79 -----LHTFLVMELLNGGELFERIKKKKH---FSETEASYIMRKLVSAVSHMHD-VGVVHRDLKPENLLFTDENDNLEIK 149 (325)
T ss_dssp -----SEEEEEECCCCSCBHHHHHHHCSC---CCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEEEC----CEEE
T ss_pred -----CEEEEEEEccCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCHHHEEEecCCCcccEE
Confidence 4899999999 479999987543 2344566779999999999997 8999999999999998776 799
Q ss_pred EEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh---
Q 004157 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--- 246 (771)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l--- 246 (771)
|+|||++......... .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||.....
T Consensus 150 l~Dfg~a~~~~~~~~~------~~~~~~t~~y~aPE~~~~------~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~ 217 (325)
T 3kn6_A 150 IIDFGFARLKPPDNQP------LKTPCFTLHYAAPELLNQ------NGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLT 217 (325)
T ss_dssp ECCCTTCEECCC----------------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------
T ss_pred EeccccceecCCCCCc------ccccCCCcCccCHHHhcC------CCCCCccchHHHHHHHHHHHhCCCCCCCCccccc
Confidence 9999999865442111 112234568999999876 3577899999999999999999999864221
Q ss_pred --------hcc------------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 247 --------RNT------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 247 --------~~~------------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
..+ ..++..+.+++.+||..+|.+||++.++++| +||+
T Consensus 218 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h-~w~~ 275 (325)
T 3kn6_A 218 CTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN-EWLQ 275 (325)
T ss_dssp CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC-GGGC
T ss_pred cccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC-hhhc
Confidence 100 2478889999999999999999999999998 4554
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-34 Score=322.55 Aligned_cols=250 Identities=16% Similarity=0.162 Sum_probs=195.7
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
...|++.+.||.|+ | +||+|+++.+|+.||||++.+... .......+++|..+|+.++||||++++++++++
T Consensus 60 ~~~f~~~~~lG~G~fG--~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~---- 133 (412)
T 2vd5_A 60 RDDFEILKVIGRGAFS--EVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDE---- 133 (412)
T ss_dssp GGGEEEEEEEEECSSC--EEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECS----
T ss_pred hhhEEEEEEEeeCCCe--EEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeC----
Confidence 35699999999998 8 999999999999999999975321 112234578899999999999999999999874
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
.++||||||| ++|.++|.+.+. ......+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+||
T Consensus 134 ----~~~~lVmE~~~gg~L~~~l~~~~~--~l~~~~~~~~~~qi~~aL~~LH~-~giiHrDLKp~NILld~~g~vkL~DF 206 (412)
T 2vd5_A 134 ----NYLYLVMEYYVGGDLLTLLSKFGE--RIPAEMARFYLAEIVMAIDSVHR-LGYVHRDIKPDNILLDRCGHIRLADF 206 (412)
T ss_dssp ----SEEEEEECCCCSCBHHHHHHHHSS--CCCHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEECTTSCEEECCC
T ss_pred ----CEEEEEEcCCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH-CCeeecccCHHHeeecCCCCEEEeec
Confidence 4899999999 589999987542 12344566779999999999997 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccc-cccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-----
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWT-AVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----- 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~-~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~----- 247 (771)
|++........ .......++..|+|||++..... .....++.++|+|||||++|||++|.+||......
T Consensus 207 Gla~~~~~~~~-----~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~ 281 (412)
T 2vd5_A 207 GSCLKLRADGT-----VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGK 281 (412)
T ss_dssp TTCEECCTTSC-----EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH
T ss_pred hhheeccCCCc-----cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 99987654211 11122345568999999863100 00124678999999999999999999998543210
Q ss_pred --------c----cCCCCcchHHHHHHHhccCCCCC---CChHHHhhCCCCCcch
Q 004157 248 --------N----TASIPKSLLPDYQRLLSSMPSRR---LNSSKLIENSEYFQNK 287 (771)
Q Consensus 248 --------~----~~~IP~~l~~~i~~lL~~~P~~R---ps~~~lL~~~~fF~n~ 287 (771)
. ...+|..+.+++++||. +|.+| ++++++++| +||++.
T Consensus 282 i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H-pff~~i 334 (412)
T 2vd5_A 282 IVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH-PFFFGL 334 (412)
T ss_dssp HHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS-GGGTTC
T ss_pred HHhcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC-CCcCCC
Confidence 0 13577889999999999 99988 589999998 677653
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=305.65 Aligned_cols=239 Identities=10% Similarity=0.035 Sum_probs=191.2
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccC
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENID 94 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d 94 (771)
...+|++++.||.|+ | +||+|+++.+|+.|+||++...... +.+.+|++++++| +||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~E~~~l~~l~~h~~i~~~~~~~~~~--- 77 (330)
T 2izr_A 7 VGPNFRVGKKIGCGNFG--ELRLGKNLYTNEYVAIKLEPMKSRA----PQLHLEYRFYKQLGSGDGIPQVYYFGPCG--- 77 (330)
T ss_dssp ETTTEEEEEECCC-CTT--SEEEEEETTTTEEEEEEEEETTCSS----CCHHHHHHHHHHHCSCTTSCCEEEEEEET---
T ss_pred EcCCeEEEEEeeccCCc--eEEEEEECCCCcEEEEEEeccccch----HHHHHHHHHHHHhhCCCCCCEEEEEEecC---
Confidence 456799999999998 8 9999999999999999999865333 2477899999999 899999999999873
Q ss_pred cCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCc-----E
Q 004157 95 ATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD-----W 168 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~-----~ 168 (771)
...||||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|. +
T Consensus 78 -----~~~~lv~e~~~~~L~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~LH~-~~iiHrDlkp~Nill~~~~~~~~~~~ 149 (330)
T 2izr_A 78 -----KYNAMVLELLGPSLEDLFDLCDR--TFSLKTVLMIAIQLISRMEYVHS-KNLIYRDVKPENFLIGRPGNKTQQVI 149 (330)
T ss_dssp -----TEEEEEEECCCCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEECCGGGTCTTSE
T ss_pred -----CccEEEEEeCCCCHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHeeeccCCCCCCceE
Confidence 4899999999 579999986421 23345567779999999999997 89999999999999999887 9
Q ss_pred EEEccCcccccCCCCCCCCCCccc-cccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh--
Q 004157 169 KLHAFDVLSEFDGNNEAANGPMLQ-YAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-- 245 (771)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~-~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-- 245 (771)
||+|||++............+... ....++..|+|||++.+ ..++.++|+|||||++|||++|..||....
T Consensus 150 kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~ 223 (330)
T 2izr_A 150 HIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLG------KEQSRRDDLEALGHMFMYFLRGSLPWQGLKAD 223 (330)
T ss_dssp EECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTT------CCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCS
T ss_pred EEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcC------CCCCchhHHHHHHHHHHHHhcCCCCccccccc
Confidence 999999998765432211111111 22344569999999876 457789999999999999999999986421
Q ss_pred -h----hc-------------cCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 246 -L----RN-------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 246 -l----~~-------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
. .. ...+| .+..++.+|++.+|..||++.++++
T Consensus 224 ~~~~~~~~i~~~~~~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~ 274 (330)
T 2izr_A 224 TLKERYQKIGDTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRK 274 (330)
T ss_dssp SHHHHHHHHHHHHHHSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred cHHHHHHHHHhhhccCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 1 00 12356 8999999999999999999998875
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-34 Score=304.39 Aligned_cols=249 Identities=16% Similarity=0.108 Sum_probs=184.7
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
...+|++.+.||.|+ | +||+|+++.+|+.|+||++............+..+...++.++||||++++++++.+
T Consensus 5 ~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~---- 78 (290)
T 3fme_A 5 KADDLEPIMELGRGAYG--VVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFRE---- 78 (290)
T ss_dssp CGGGEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECS----
T ss_pred cHHhhhhHHhcCCCCCe--EEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeecc----
Confidence 445799999999998 8 999999999999999999986544444555666677778999999999999999863
Q ss_pred CCcccEEEEEecCC-cchHHHHHHhC-CCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV-MPLSEKIKELG-LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v-~~L~~~L~~~~-~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+|+||||+ ++|.+++.... .........+..++.||+.||.|||+.++++||||||+||+++.+|.+||+||
T Consensus 79 ----~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Df 154 (290)
T 3fme_A 79 ----GDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDF 154 (290)
T ss_dssp ----SSEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC
T ss_pred ----CCEEEEEehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeec
Confidence 3789999999 67877776521 11223345566779999999999997339999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh--h---hh-
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE--E---LR- 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~--~---l~- 247 (771)
|++........ .....++..|+|||++..... ...++.++|+|||||++|+|++|..||... . +.
T Consensus 155 g~~~~~~~~~~-------~~~~~~t~~y~aPE~~~~~~~--~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~ 225 (290)
T 3fme_A 155 GISGYLVDDVA-------KDIDAGCKPYMAPERINPELN--QKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQ 225 (290)
T ss_dssp ----------------------CCCCCCSCHHHHSCCTT--C--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHH
T ss_pred CCccccccccc-------ccccCCCccccChhhcChhhc--CcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHH
Confidence 99976654211 111234558999999742110 135677999999999999999999888531 1 10
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 ---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 ---------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
....++..+.+++.+||..+|.+||++.++++| +||+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h-p~f~ 271 (290)
T 3fme_A 226 VVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH-PFFT 271 (290)
T ss_dssp HHHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS-HHHH
T ss_pred HhccCCCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhC-cccc
Confidence 113577889999999999999999999999998 4553
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-34 Score=305.82 Aligned_cols=250 Identities=18% Similarity=0.258 Sum_probs=189.7
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC--
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID-- 94 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d-- 94 (771)
..+|++.+.||.|+ | +||+|+++.+|+.|+||++... .....+.+.+|++++++|+||||+++++++......
T Consensus 10 ~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 85 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNG--LVFSAVDNDCDKRVAIKKIVLT--DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLT 85 (320)
T ss_dssp TTTEEEEEECC-------CEEEEEETTTTEEEEEEEEECC--SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCC
T ss_pred CCceeEEEEeccCCCe--EEEEEEECCCCeEEEEEEEecC--ChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccc
Confidence 45799999999998 8 9999999999999999999854 334567788999999999999999999988532100
Q ss_pred ----cCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEc-CCCcE
Q 004157 95 ----ATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT-QTLDW 168 (771)
Q Consensus 95 ----~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~-~~G~~ 168 (771)
.......+|+||||+ ++|.++++... .....+..++.||+.||.|||+ .+++||||||+||+++ .++.+
T Consensus 86 ~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~----~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~Nil~~~~~~~~ 160 (320)
T 2i6l_A 86 DDVGSLTELNSVYIVQEYMETDLANVLEQGP----LLEEHARLFMYQLLRGLKYIHS-ANVLHRDLKPANLFINTEDLVL 160 (320)
T ss_dssp C----CCSCSEEEEEEECCSEEHHHHHTTCC----CCHHHHHHHHHHHHHHHHHHHH-TTCBCCCCSGGGEEEETTTTEE
T ss_pred cccccccccCceeEEeeccCCCHHHHhhcCC----ccHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEEcCCCCeE
Confidence 001135899999999 68988886543 2344566779999999999997 8999999999999997 56799
Q ss_pred EEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-
Q 004157 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR- 247 (771)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~- 247 (771)
||+|||++........... .......+..|+|||++.+. ..++.++|+|||||++|+|++|..||......
T Consensus 161 kl~Dfg~~~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~ 232 (320)
T 2i6l_A 161 KIGDFGLARIMDPHYSHKG---HLSEGLVTKWYRSPRLLLSP-----NNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE 232 (320)
T ss_dssp EECCCTTCBCC-----------CCCGGGSCCTTCCHHHHHCT-----TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred EEccCccccccCCCccccc---ccccccccccccCcHHhcCc-----ccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHH
Confidence 9999999987643211100 01122345589999987643 35678999999999999999999888532110
Q ss_pred -----------------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 -----------------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 -----------------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
....++..+.+++.+||+.+|.+||++.++++| +||+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h-p~~~ 310 (320)
T 2i6l_A 233 QMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH-PYMS 310 (320)
T ss_dssp HHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS-HHHH
T ss_pred HHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC-cccc
Confidence 013578889999999999999999999999998 4553
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-34 Score=305.01 Aligned_cols=252 Identities=15% Similarity=0.219 Sum_probs=176.8
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
+...+|++.+.||.|+ | +||+|+++.+|+.|+||++...... .....+.+|++.+++++||||+++++++...
T Consensus 12 i~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--- 85 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATA--VVQAAYCAPKKEKVAIKRINLEKCQ-TSMDELLKEIQAMSQCHHPNIVSYYTSFVVK--- 85 (303)
T ss_dssp -CCCCCEEEEECC---CC--CEEEEEC----CEEEEECCC-----------------CCCCCCCTTBCCEEEEEESS---
T ss_pred cchhhhhhhheeccccce--EEEEEEECCCCcEEEEEEEEhhhcc-hhHHHHHHHHHHHhhcCCCCEeeEEEEEeec---
Confidence 3456799999999998 8 9999999999999999998754322 2355678899999999999999999999864
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhC-----CCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELG-----LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD 167 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~-----~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~ 167 (771)
..+|+||||+ ++|.+++.... .........+..++.||+.||.|||+ .+++||||+|+||+++.+|.
T Consensus 86 -----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~i~H~dl~p~Nil~~~~~~ 159 (303)
T 2vwi_A 86 -----DELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK-NGQIHRDVKAGNILLGEDGS 159 (303)
T ss_dssp -----SCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCSGGGEEECTTCC
T ss_pred -----CCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCCCCChhhEEEcCCCC
Confidence 3789999999 47998887521 11223445567779999999999997 89999999999999999999
Q ss_pred EEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-
Q 004157 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL- 246 (771)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l- 246 (771)
+||+|||++............ .......++..|+|||++.+. ..++.++|+|||||++|+|++|..||.....
T Consensus 160 ~kl~dfg~~~~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~ 233 (303)
T 2vwi_A 160 VQIADFGVSAFLATGGDITRN-KVRKTFVGTPCWMAPEVMEQV-----RGYDFKADIWSFGITAIELATGAAPYHKYPPM 233 (303)
T ss_dssp EEECCCHHHHHCC----------------CCCTTCCHHHHHHH-----HCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGG
T ss_pred EEEEeccchheeccCCCccch-hhhcccCCCccccCHHHhccc-----cCCCchhhHHHHHHHHHHHHhCCCCCccCchh
Confidence 999999998766542211100 011122345589999998652 2466899999999999999999988754211
Q ss_pred ---------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 247 ---------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 247 ---------------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
.....++..+.+++.+||+.+|.+||++.++++| +||++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h-~~~~~ 293 (303)
T 2vwi_A 234 KVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH-KFFQK 293 (303)
T ss_dssp GHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS-TTC--
T ss_pred hHHHHHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC-hhhhc
Confidence 0113467789999999999999999999999998 56654
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-34 Score=327.79 Aligned_cols=237 Identities=19% Similarity=0.261 Sum_probs=192.6
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.+|++.+.||.|+ | +||+|+++.+|+.||||++.+..........+.+|+++|++|+||||++++++++..
T Consensus 22 ~~y~~~~~lG~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~------ 93 (486)
T 3mwu_A 22 ERYNIVCMLGKGSFG--EVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDS------ 93 (486)
T ss_dssp HHEEEEEEEECCSSS--EEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECS------
T ss_pred cceEEeEEEeecCCE--EEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcC------
Confidence 3699999999999 8 999999999999999999975432233456788999999999999999999999863
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEc---CCCcEEEEc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT---QTLDWKLHA 172 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~---~~G~~KL~d 172 (771)
..+|+||||| ++|.+.+..... .....+..++.||+.||.|||+ .+++||||||+||+++ .++.+||+|
T Consensus 94 --~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~i~~qi~~al~~lH~-~~ivH~Dlkp~Nil~~~~~~~~~~kl~D 167 (486)
T 3mwu_A 94 --SSFYIVGELYTGGELFDEIIKRKR---FSEHDAARIIKQVFSGITYMHK-HNIVHRDLKPENILLESKEKDCDIKIID 167 (486)
T ss_dssp --SEEEEEECCCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEESSSSTTCCEEECS
T ss_pred --CEEEEEEEcCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeEeccCchHHEEEecCCCCCCEEEEE
Confidence 4899999999 478888876543 2344566779999999999997 8999999999999995 456799999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh------
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------ 246 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l------ 246 (771)
||++........ .....++..|+|||++.+ .++.++|+|||||++|+|++|.+||.....
T Consensus 168 fg~a~~~~~~~~-------~~~~~gt~~y~aPE~~~~-------~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~ 233 (486)
T 3mwu_A 168 FGLSTCFQQNTK-------MKDRIGTAYYIAPEVLRG-------TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKR 233 (486)
T ss_dssp CSCTTTBCCC-----------CCTTGGGGCCGGGGGS-------CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred CCcCeECCCCCc-------cCCCcCCCCCCCHHHhCC-------CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 999986654211 112234568999999875 366799999999999999999999854321
Q ss_pred ----------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 247 ----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 247 ----------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
.....++..+.+++.+||..+|.+||++.++|+| +||
T Consensus 234 i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h-p~~ 280 (486)
T 3mwu_A 234 VETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH-PWI 280 (486)
T ss_dssp HHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC-HHH
T ss_pred HHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC-Hhh
Confidence 1113567789999999999999999999999999 444
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-34 Score=312.88 Aligned_cols=242 Identities=17% Similarity=0.256 Sum_probs=192.2
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
..|.+.+.||.|+ | +||+|+++.+|+.|+||++......+.....+.+|+.+++.++||||+++++++...... .
T Consensus 24 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~--~ 99 (353)
T 3coi_A 24 KTYVSPTHVGSGAYG--SVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSL--R 99 (353)
T ss_dssp TTEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSG--G
T ss_pred ceEEEeeeEecCCCe--EEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccc--c
Confidence 4799999999998 8 999999999999999999987655555677889999999999999999999999764310 0
Q ss_pred cccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
....+|+||||+ ++|.+++... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 100 ~~~~~~lv~e~~~~~l~~~~~~~-----~~~~~~~~i~~qi~~al~~LH~-~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~ 173 (353)
T 3coi_A 100 NFYDFYLVMPFMQTDLQKIMGLK-----FSEEKIQYLVYQMLKGLKYIHS-AGVVHRDLKPGNLAVNEDCELKILDFGLA 173 (353)
T ss_dssp GCCCCEEEEECCSEEGGGTTTSC-----CCHHHHHHHHHHHHHHHHHHHH-TTCCCSSCCGGGEEECTTCCEEECSTTCT
T ss_pred cceeEEEEeccccCCHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEeECCCCcEEEeecccc
Confidence 012469999999 5676655321 2345567779999999999997 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh---------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--------- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~--------- 247 (771)
...... .....++..|+|||++.+. ..++.++|+|||||++|+|++|..||......
T Consensus 174 ~~~~~~---------~~~~~~t~~y~aPE~~~~~-----~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~ 239 (353)
T 3coi_A 174 RHADAE---------MTGYVVTRWYRAPEVILSW-----MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKV 239 (353)
T ss_dssp TC-----------------CCSBCCSCHHHHSCC-----SCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHH
T ss_pred cCCCCC---------ccccccCcCcCCHHHHhCc-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 765431 1122345589999998752 35678999999999999999999988542210
Q ss_pred ----------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 ----------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 ----------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
....++..+.+++.+||..+|.+||++.++++| +||+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h-p~f~ 310 (353)
T 3coi_A 240 TGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH-PFFE 310 (353)
T ss_dssp HCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS-GGGT
T ss_pred hCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC-cchh
Confidence 012457789999999999999999999999998 5554
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-34 Score=303.47 Aligned_cols=238 Identities=18% Similarity=0.268 Sum_probs=193.8
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
.+|++++.||.|+ | +||+|+++.++..|+||++...... ......+.+|+++++.++||||++++++++..
T Consensus 14 ~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 86 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFG--NVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDR----- 86 (284)
T ss_dssp GGEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS-----
T ss_pred hhceeeheecCCCCe--EEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcC-----
Confidence 4699999999998 8 9999999999999999999753211 12345788999999999999999999999863
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 87 ---~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~p~Nil~~~~~~~kl~Dfg 159 (284)
T 2vgo_A 87 ---KRIYLMLEFAPRGELYKELQKHGR---FDEQRSATFMEELADALHYCHE-RKVIHRDIKPENLLMGYKGELKIADFG 159 (284)
T ss_dssp ---SEEEEEECCCTTEEHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHT-TTEECCCCSGGGEEECTTCCEEECCCT
T ss_pred ---CEEEEEEEeCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCceecCCCHHHEEEcCCCCEEEeccc
Confidence 4899999999 489999987643 2344466679999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------- 247 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------- 247 (771)
++....... .....+...|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 160 ~~~~~~~~~--------~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~ 225 (284)
T 2vgo_A 160 WSVHAPSLR--------RRTMCGTLDYLPPEMIEG------KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV 225 (284)
T ss_dssp TCEECSSSC--------BCCCCSCGGGCCHHHHTT------CCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH
T ss_pred ccccCcccc--------cccccCCCCcCCHHHhcc------CCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHh
Confidence 987654321 111234458999999876 35678999999999999999999988643211
Q ss_pred -----ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 -----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 -----~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
....++..+.+++.+||..+|.+||++.++++| +||+
T Consensus 226 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h-~~~~ 267 (284)
T 2vgo_A 226 NVDLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH-PWVK 267 (284)
T ss_dssp TTCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC-HHHH
T ss_pred ccccCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC-HHHH
Confidence 114467889999999999999999999999998 4443
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-34 Score=325.93 Aligned_cols=236 Identities=19% Similarity=0.199 Sum_probs=191.6
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-----------hHHHHHHHHHHHHhcCCCCCeeEEe
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-----------GHLAAARNGVKRLRTVRHPNILAFL 85 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-----------~~~~~~~~ei~~Lk~LrHPnIlkv~ 85 (771)
...|+++++||.|+ | +||+|+++.+++.||||++.+..... ...+.+.+|+++|++|+||||++++
T Consensus 35 ~~~Y~~~~~lG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~ 112 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYG--EVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLF 112 (504)
T ss_dssp GGTEEEEEEEEC--CE--EEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred ccceEEEeEecccCCe--EEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence 45799999999998 8 99999999999999999998643221 2356788999999999999999999
Q ss_pred eeEEecccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEc
Q 004157 86 HSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT 163 (771)
Q Consensus 86 d~~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~ 163 (771)
++++.. ..+||||||| ++|.+++...... ....+..++.||+.||.|||+ .+++||||||+||+++
T Consensus 113 ~~~~~~--------~~~~lv~e~~~gg~L~~~l~~~~~~---~~~~~~~i~~qi~~~l~~lH~-~~ivH~Dlkp~Nil~~ 180 (504)
T 3q5i_A 113 DVFEDK--------KYFYLVTEFYEGGELFEQIINRHKF---DECDAANIMKQILSGICYLHK-HNIVHRDIKPENILLE 180 (504)
T ss_dssp EEEECS--------SEEEEEEECCTTCBHHHHHHHHSCC---CHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEES
T ss_pred EEEEcC--------CEEEEEEecCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeEeCCCcHHHEEEe
Confidence 999863 4899999999 4798888775432 344466679999999999997 8999999999999999
Q ss_pred CCC---cEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCC
Q 004157 164 QTL---DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL 240 (771)
Q Consensus 164 ~~G---~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p 240 (771)
.+| .+||+|||++........ .....++..|+|||++.+ .++.++|+|||||++|+|++|.+|
T Consensus 181 ~~~~~~~~kl~Dfg~a~~~~~~~~-------~~~~~gt~~y~aPE~~~~-------~~~~~~DiwslG~il~~ll~g~~p 246 (504)
T 3q5i_A 181 NKNSLLNIKIVDFGLSSFFSKDYK-------LRDRLGTAYYIAPEVLKK-------KYNEKCDVWSCGVIMYILLCGYPP 246 (504)
T ss_dssp STTCCSSEEECCCTTCEECCTTSC-------BCCCCSCTTTCCHHHHTT-------CBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred cCCCCccEEEEECCCCEEcCCCCc-------cccccCCcCCCCHHHhcc-------CCCchHHHHHHHHHHHHHHhCCCC
Confidence 876 699999999987654211 122345568999999864 466799999999999999999999
Q ss_pred CChhhhh----------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 241 SKTEELR----------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 241 ~~~~~l~----------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
|...... ....++..+.+++.+||..+|.+||++.++|+|+
T Consensus 247 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~ 303 (504)
T 3q5i_A 247 FGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSR 303 (504)
T ss_dssp SCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred CCCCCHHHHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCH
Confidence 8643211 1146788999999999999999999999999994
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-34 Score=301.05 Aligned_cols=239 Identities=19% Similarity=0.246 Sum_probs=192.9
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch----hHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD----GHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~----~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
..|++.+.||.|+ | +||+|+++.+|+.|+||++....... ...+.+.+|++++++|+||||+++++++...
T Consensus 5 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-- 80 (283)
T 3bhy_A 5 DHYEMGEELGSGQFA--IVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENK-- 80 (283)
T ss_dssp HHEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS--
T ss_pred hhhhhHHhhcccCce--EEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCC--
Confidence 3599999999998 7 99999999999999999998653322 2356788999999999999999999999863
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC----c
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL----D 167 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G----~ 167 (771)
..+|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.++ .
T Consensus 81 ------~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~Nil~~~~~~~~~~ 150 (283)
T 3bhy_A 81 ------TDVVLILELVSGGELFDFLAEKES---LTEDEATQFLKQILDGVHYLHS-KRIAHFDLKPENIMLLDKNVPNPR 150 (283)
T ss_dssp ------SEEEEEEECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEESCSSSSSCC
T ss_pred ------CeEEEEEeecCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCccCCCCChHHEEEecCCCCCCc
Confidence 4899999999 579999977543 2344566779999999999997 8999999999999999887 8
Q ss_pred EEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh
Q 004157 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR 247 (771)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~ 247 (771)
+||+|||++........ .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 151 ~kl~dfg~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~ 217 (283)
T 3bhy_A 151 IKLIDFGIAHKIEAGNE-------FKNIFGTPEFVAPEIVNY------EPLGLEADMWSIGVITYILLSGASPFLGETKQ 217 (283)
T ss_dssp EEECCCTTCEECC---------------CCCGGGCCHHHHTT------CCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred eEEEecccceeccCCCc-------ccccCCCcCccCcceecC------CCCCcchhhhhHHHHHHHHHHCCCCCCCcchH
Confidence 99999999987654211 111234458999999876 35678999999999999999999888542210
Q ss_pred ----------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 ----------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 ----------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
....+|..+.+++.+||..+|.+||++.++++| +||+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h-~~~~ 270 (283)
T 3bhy_A 218 ETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEH-SWIK 270 (283)
T ss_dssp HHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHC-HHHH
T ss_pred HHHHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhC-HHHH
Confidence 114567789999999999999999999999998 4443
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-34 Score=317.48 Aligned_cols=236 Identities=18% Similarity=0.223 Sum_probs=183.9
Q ss_pred Cceec-CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHH-hcCCCCCeeEEeeeEEecccCcC
Q 004157 20 PYNIG-DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRL-RTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 20 ~Y~i~-e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~L-k~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
.|.+. +.||.|+ | +||+|+++.+|+.|+||++... ..+++|+.++ +.++||||++++++++....+
T Consensus 62 ~y~~~~~~LG~G~~g--~V~~~~~~~~~~~vAiK~~~~~-------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~-- 130 (400)
T 1nxk_A 62 DYKVTSQVLGLGING--KVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAG-- 130 (400)
T ss_dssp TEEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT--
T ss_pred cceeccceeeeccCe--EEEEEEECCCCCEEEEEEeCcc-------hhHHHHHHHHHHhcCCCCcceEeEEEeecccC--
Confidence 57776 6799998 8 9999999999999999999742 2466788887 455899999999999753222
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC---CCcEEEE
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ---TLDWKLH 171 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~---~G~~KL~ 171 (771)
..++||||||| ++|.++|...... ......+..++.||+.||.|||+ .+|+||||||+||+++. +|.+||+
T Consensus 131 --~~~~~lv~E~~~gg~L~~~l~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~Nill~~~~~~~~~kl~ 206 (400)
T 1nxk_A 131 --RKCLLIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKLT 206 (400)
T ss_dssp --EEEEEEEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEESSSSTTCCEEEC
T ss_pred --CcEEEEEEEeCCCCcHHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHH-CCccccCcCcceEEEecCCCCccEEEE
Confidence 35899999999 5899999864321 12345567779999999999997 89999999999999998 7899999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh----
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---- 247 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~---- 247 (771)
|||++........ .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 207 DFG~a~~~~~~~~-------~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~ 273 (400)
T 1nxk_A 207 DFGFAKETTSHNS-------LTTPCYTPYYVAPEVLGP------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP 273 (400)
T ss_dssp CCTTCEECC------------------CTTCCGGGSCC------CCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCC
T ss_pred ecccccccCCCCc-------cccCCCCCCccCHhhcCC------CCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccH
Confidence 9999986653211 112234568999999865 46778999999999999999999888543210
Q ss_pred ----------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCC
Q 004157 248 ----------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEY 283 (771)
Q Consensus 248 ----------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~f 283 (771)
....++..+.+++++||..+|.+||++.++++|+||
T Consensus 274 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~ 325 (400)
T 1nxk_A 274 GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 325 (400)
T ss_dssp SHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHH
T ss_pred HHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccc
Confidence 013577889999999999999999999999999443
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=312.41 Aligned_cols=240 Identities=16% Similarity=0.252 Sum_probs=190.3
Q ss_pred CCceecCCCCCCC-CceEEEEeEEC-------CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEE
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSK-------DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTE 89 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k-------~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e 89 (771)
..|++++.||.|+ | +||+|++. .++..|+||++... ..+...+.+.+|+++|++| +||||+++++++.
T Consensus 81 ~~~~~~~~LG~G~fg--~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 157 (370)
T 2psq_A 81 DKLTLGKPLGEGCFG--QVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 157 (370)
T ss_dssp GGEEEEEEESCCSSS--EEEEEEEETCSTTCTTCEEEEEEEECCTT-CBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEEC
T ss_pred HHCEeeeEEeeCCCe--eEEEEEEecccCcCcCcceeEEEEEecCC-cCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEc
Confidence 4699999999998 9 99999875 24457999999754 3344567889999999999 8999999999997
Q ss_pred ecccCcCCcccEEEEEecCC--cchHHHHHHhCCC-------------CCCcHHHHHHHHHHHHHHHHHHHcCCCceecC
Q 004157 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLE-------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGN 154 (771)
Q Consensus 90 ~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~-------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~d 154 (771)
.+ ..+||||||+ ++|.++|...... .......+..++.||+.||.|||+ .+++|||
T Consensus 158 ~~--------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~ivHrD 228 (370)
T 2psq_A 158 QD--------GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS-QKCIHRD 228 (370)
T ss_dssp SS--------SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHH-TTEECSC
T ss_pred cC--------CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh-CCeeccc
Confidence 63 3789999999 5899999876421 112334466779999999999997 8999999
Q ss_pred CCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHH
Q 004157 155 VCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYEL 234 (771)
Q Consensus 155 Ikp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el 234 (771)
|||+||+++.+|.+||+|||++.......... .......+..|+|||++.+ ..++.++|+|||||++|||
T Consensus 229 lkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~----~~~~~~~t~~y~aPE~~~~------~~~~~~~DvwslG~il~el 298 (370)
T 2psq_A 229 LAARNVLVTENNVMKIADFGLARDINNIDYYK----KTTNGRLPVKWMAPEALFD------RVYTHQSDVWSFGVLMWEI 298 (370)
T ss_dssp CCGGGEEECTTCCEEECCCSSCEETTCCCTTC----TTTTTTSCGGGCCHHHHHT------CCCCHHHHHHHHHHHHHHH
T ss_pred cchhhEEECCCCCEEEccccCCcccCccccee----cccCCCcccceECHhHhcC------CCCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999998765422110 0111223347999999876 4677899999999999999
Q ss_pred hh-CCCCCChhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 235 FS-GMRLSKTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 235 ~~-g~~p~~~~~l~-------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
++ |..||...... ....++..+.+++.+||..+|.+||++.+++++
T Consensus 299 lt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~ 358 (370)
T 2psq_A 299 FTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 358 (370)
T ss_dssp HTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HcCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 98 88887543211 113466789999999999999999999999875
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-33 Score=298.48 Aligned_cols=246 Identities=17% Similarity=0.233 Sum_probs=192.4
Q ss_pred CCCCCceecC-----CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEE
Q 004157 16 VKDLPYNIGD-----PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTE 89 (771)
Q Consensus 16 ~~~~~Y~i~e-----~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e 89 (771)
+..+.|++.+ .||.|+ | +||+|+++.++..|+||++..... ...+.+.+|+.+++.++||||+++++++.
T Consensus 14 ~~~~~~~~~~~~~~~~lg~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 89 (295)
T 2clq_A 14 LLEYDYEYDENGDRVVLGKGTYG--IVYAGRDLSNQVRIAIKEIPERDS--RYSQPLHEEIALHKHLKHKNIVQYLGSFS 89 (295)
T ss_dssp CCCEEECBCTTSSBCEEEECSSS--EEEEEEETTTCCEEEEEEEECCCC-----HHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred cccccccccCCCCcEEEeecCcE--EEEEEEECCCCeEEEEEEccCCch--HHHHHHHHHHHHHHhCCCCCEeeEeeEEE
Confidence 3445566655 788888 8 999999999999999999986432 34567889999999999999999999998
Q ss_pred ecccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC-CC
Q 004157 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ-TL 166 (771)
Q Consensus 90 ~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~-~G 166 (771)
.. ..+|+||||+ ++|.+++.............+..++.||+.||.|||+ .+++||||||+||+++. +|
T Consensus 90 ~~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~p~Nil~~~~~~ 160 (295)
T 2clq_A 90 EN--------GFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD-NQIVHRDIKGDNVLINTYSG 160 (295)
T ss_dssp ET--------TEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEEETTTC
T ss_pred eC--------CcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHh-CCEEccCCChhhEEEECCCC
Confidence 63 4899999999 5799999875432233355567779999999999997 89999999999999987 89
Q ss_pred cEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh
Q 004157 167 DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL 246 (771)
Q Consensus 167 ~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l 246 (771)
.+||+|||++......... .....++..|+|||++.+.. ..++.++|+|||||++|+|++|..||.....
T Consensus 161 ~~kl~Dfg~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~----~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 230 (295)
T 2clq_A 161 VLKISDFGTSKRLAGINPC------TETFTGTLQYMAPEIIDKGP----RGYGKAADIWSLGCTIIEMATGKPPFYELGE 230 (295)
T ss_dssp CEEECCTTTCEESCC-----------CCCCCCGGGCCHHHHHHGG----GGCSHHHHHHHHHHHHHHHHHTSCTTGGGSS
T ss_pred CEEEeecccccccCCCCCc------ccccCCCccccChhhhcCCC----CCCCcHHHHHHHHHHHHHHHHCCCCccCCCc
Confidence 9999999999876542111 11123345899999986531 1356789999999999999999988853210
Q ss_pred ---------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 247 ---------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 247 ---------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
.....++..+.+++.+||+.+|.+||++.++++| +||+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~-~~~~ 283 (295)
T 2clq_A 231 PQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVD-EFLK 283 (295)
T ss_dssp HHHHHHHHHHHCCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS-GGGC
T ss_pred hhHHHHhhccccccccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC-hhhh
Confidence 0113567788999999999999999999999998 5554
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-34 Score=313.06 Aligned_cols=249 Identities=16% Similarity=0.169 Sum_probs=190.7
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCC---CchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTN---AQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~---~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
.+|++.+.||.|+ | +||+|+++.++..|+||++.+.. ......+.+.+|++++++|+||||+++++++++.
T Consensus 26 ~~y~~~~~lG~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~--- 100 (345)
T 3hko_A 26 KKYHLKGAIGQGSYG--VVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE--- 100 (345)
T ss_dssp HHEEEEEEEEECSSC--EEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS---
T ss_pred hheeecceeeecCCe--EEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC---
Confidence 3699999999998 8 99999999999999999997532 1223467789999999999999999999999863
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCC-------------------------------------CCCCcHHHHHHHHH
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGL-------------------------------------EGSQRDEYYAWGLN 135 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~-------------------------------------~~~~~~~~i~~gl~ 135 (771)
..+||||||| ++|.+++..... ........+..++.
T Consensus 101 -----~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 175 (345)
T 3hko_A 101 -----QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMR 175 (345)
T ss_dssp -----SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHH
T ss_pred -----CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHH
Confidence 4899999999 579888752110 00012334666799
Q ss_pred HHHHHHHHHHcCCCceecCCCCCCEEEcCCC--cEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhcccccccc
Q 004157 136 QIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL--DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTA 213 (771)
Q Consensus 136 QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G--~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~ 213 (771)
||+.||.|||+ .+++||||||+||+++.++ .+||+|||++.......... ........++..|+|||++.+.
T Consensus 176 qi~~~l~~LH~-~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~--- 249 (345)
T 3hko_A 176 QIFSALHYLHN-QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGE--YYGMTTKAGTPYFVAPEVLNTT--- 249 (345)
T ss_dssp HHHHHHHHHHH-TTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC----------CCCGGGCCHHHHTCS---
T ss_pred HHHHHHHHHHH-CCccccCCChhhEEEecCCCceEEEeeccccccccccCccc--cccccccCCCccccCchhhccC---
Confidence 99999999997 8999999999999998777 89999999998654321111 1111222345589999998642
Q ss_pred ccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h------------ccCCCCcchHHHHHHHhccCCCCCCChHHH
Q 004157 214 VRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKL 277 (771)
Q Consensus 214 ~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~l 277 (771)
...++.++|+|||||++|+|++|..||..... . ....++..+.+++.+||+.+|.+||++.++
T Consensus 250 -~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~ 328 (345)
T 3hko_A 250 -NESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRA 328 (345)
T ss_dssp -SSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred -CCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHH
Confidence 13567799999999999999999998853211 0 112367889999999999999999999999
Q ss_pred hhCCCCCc
Q 004157 278 IENSEYFQ 285 (771)
Q Consensus 278 L~~~~fF~ 285 (771)
++| +||+
T Consensus 329 l~h-p~~~ 335 (345)
T 3hko_A 329 LQH-PWIS 335 (345)
T ss_dssp HHS-HHHH
T ss_pred hcC-hhhc
Confidence 998 4543
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=326.27 Aligned_cols=247 Identities=13% Similarity=0.136 Sum_probs=199.3
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
....|++.+.||.|+ | +||+|+++.+|+.|+||++.+..... .....+.+|+++|++++||||++++++++..
T Consensus 183 ~~~~f~~~~~LG~G~fG--~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~--- 257 (543)
T 3c4z_A 183 GEDWFLDFRVLGRGGFG--EVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETK--- 257 (543)
T ss_dssp CGGGEEEEEEEEECSSS--EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECS---
T ss_pred ChhheEEEEEEeeCCCe--EEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeC---
Confidence 345799999999998 8 99999999999999999997542211 2346788999999999999999999999863
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCC-CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEE
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~ 171 (771)
..+||||||| ++|..+|..... ........+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+
T Consensus 258 -----~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~-~gIvHrDLKP~NILl~~~g~vkL~ 331 (543)
T 3c4z_A 258 -----TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ-RNIIYRDLKPENVLLDDDGNVRIS 331 (543)
T ss_dssp -----SEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEECTTSCEEEC
T ss_pred -----CEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHH-cCCcccCCChHHEEEeCCCCEEEe
Confidence 4899999999 589999876542 1223345566779999999999997 899999999999999999999999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh------
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE------ 245 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~------ 245 (771)
|||++........ ......++..|+|||++.+ ..++.++|+|||||++|||++|.+||....
T Consensus 332 DFGla~~~~~~~~------~~~~~~GT~~Y~APE~l~~------~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~ 399 (543)
T 3c4z_A 332 DLGLAVELKAGQT------KTKGYAGTPGFMAPELLLG------EEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENK 399 (543)
T ss_dssp CCTTCEECCTTCC------CBCCCCSCTTTSCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHH
T ss_pred ecceeeeccCCCc------ccccccCCccccChhhhcC------CCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHH
Confidence 9999987654211 1122345668999999876 467789999999999999999999986431
Q ss_pred -h-----h----ccCCCCcchHHHHHHHhccCCCCCCCh-----HHHhhCCCCCcch
Q 004157 246 -L-----R----NTASIPKSLLPDYQRLLSSMPSRRLNS-----SKLIENSEYFQNK 287 (771)
Q Consensus 246 -l-----~----~~~~IP~~l~~~i~~lL~~~P~~Rps~-----~~lL~~~~fF~n~ 287 (771)
+ . ....++..+.+++.+||..+|.+||+. .++++| +||++.
T Consensus 400 ~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~H-pff~~i 455 (543)
T 3c4z_A 400 ELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTH-PLFRDI 455 (543)
T ss_dssp HHHHHHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTS-GGGTTC
T ss_pred HHHHHHhhcccCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcC-ccccCC
Confidence 1 0 113567789999999999999999964 788887 677653
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-34 Score=305.43 Aligned_cols=248 Identities=20% Similarity=0.296 Sum_probs=190.7
Q ss_pred CCCceecCCCCCCC-CceEEEEeEEC-CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC---CCCCeeEEeeeEEecc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSK-DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV---RHPNILAFLHSTEVEN 92 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k-~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L---rHPnIlkv~d~~e~e~ 92 (771)
...|++.+.||.|+ | +||+|+++ .+|+.|+||++............+.+|+..++.| +||||+++++++....
T Consensus 10 ~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 10 DQQYECVAEIGEGAYG--KVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp GGTEEEEEEEEEETTE--EEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred hhceeeeeeecccccE--EEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 35799999999998 8 99999995 6788999999975432222222345566666655 8999999999987321
Q ss_pred cCcCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEE
Q 004157 93 IDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~ 171 (771)
.+ ....+|+||||+ ++|.+++....... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+
T Consensus 88 ~~---~~~~~~lv~e~~~~~L~~~l~~~~~~~-~~~~~~~~~~~qi~~~l~~lH~-~gi~H~dlkp~Nili~~~~~~kl~ 162 (326)
T 1blx_A 88 TD---RETKLTLVFEHVDQDLTTYLDKVPEPG-VPTETIKDMMFQLLRGLDFLHS-HRVVHRDLKPQNILVTSSGQIKLA 162 (326)
T ss_dssp CS---SEEEEEEEEECCSCBHHHHHHHSCTTC-SCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEECTTCCEEEC
T ss_pred cC---CCceEEEEEecCCCCHHHHHHhcccCC-CCHHHHHHHHHHHHHHHHHHHH-CCceeccCCHHHeEEcCCCCEEEe
Confidence 11 145899999999 68999998754322 2344567779999999999997 899999999999999999999999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-----
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----- 246 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----- 246 (771)
|||++....... ......++..|+|||++.+ ..++.++|+|||||++|+|++|.+||.....
T Consensus 163 Dfg~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~ 229 (326)
T 1blx_A 163 DFGLARIYSFQM-------ALTSVVVTLWYRAPEVLLQ------SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLG 229 (326)
T ss_dssp SCCSCCCCCGGG-------GGCCCCCCCTTCCHHHHTT------CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred cCcccccccCCC-------CccccccccceeCHHHHhc------CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence 999987654311 1112234568999999876 3567899999999999999999988853210
Q ss_pred ----------------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 247 ----------------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 247 ----------------------------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
.....++..+.+++.+||..+|.+||++.++++| +||++
T Consensus 230 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h-p~~~~ 302 (326)
T 1blx_A 230 KILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH-PYFQD 302 (326)
T ss_dssp HHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS-GGGTT
T ss_pred HHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC-ccccc
Confidence 0013467778999999999999999999999998 55543
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=302.02 Aligned_cols=235 Identities=17% Similarity=0.209 Sum_probs=193.7
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
..|++.+.||.|+ | +||+|+++.+++.|+||++...... ...+.+.+|+.+++.++||||+++++++..+
T Consensus 22 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------ 92 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFG--EVFKGIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYVTKYYGSYLKD------ 92 (303)
T ss_dssp GTEEEEEEEEECSSS--EEEEEEETTTCCEEEEEEEETTTCS-TTHHHHHHHHHHHHHCCCTTBCCEEEEEEET------
T ss_pred HHHHHhhhhcccCCe--EEEEEEECCCCcEEEEEEecccccH-HHHHHHHHHHHHHHhCCCCCEeEEEEEEecC------
Confidence 4599999999998 8 9999999999999999999875433 3456788999999999999999999999864
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+|+||||+ ++|.+++....+ ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 93 --~~~~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~p~Nil~~~~~~~kl~Dfg~ 165 (303)
T 3a7i_A 93 --TKLWIIMEYLGGGSALDLLEPGPL----DETQIATILREILKGLDYLHS-EKKIHRDIKAANVLLSEHGEVKLADFGV 165 (303)
T ss_dssp --TEEEEEEECCTTEEHHHHHTTSCC----CHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred --CeEEEEEEeCCCCcHHHHHhcCCC----CHHHHHHHHHHHHHHHHHHHH-CCCccCCCChheEEECCCCCEEEeeccc
Confidence 4899999999 479888865432 344566779999999999997 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh---------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--------- 246 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l--------- 246 (771)
+........ ......+...|+|||++.+ ..++.++|+|||||++|+|++|..||.....
T Consensus 166 ~~~~~~~~~------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 233 (303)
T 3a7i_A 166 AGQLTDTQI------KRNTFVGTPFWMAPEVIKQ------SAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPK 233 (303)
T ss_dssp CEECBTTBC------CBCCCCSCGGGCCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH
T ss_pred ceecCcccc------ccCccCCCcCccCHHHHhc------CCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhc
Confidence 987654211 1112234457999999876 3566799999999999999999988754211
Q ss_pred ----hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 247 ----RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 247 ----~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
.....+|..+.+++.+||..+|.+||++.++++|.
T Consensus 234 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 234 NNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp SCCCCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred CCCCCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 01135778899999999999999999999999984
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=308.43 Aligned_cols=247 Identities=18% Similarity=0.215 Sum_probs=190.4
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCC--CCeeEEeeeEEeccc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRH--PNILAFLHSTEVENI 93 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrH--PnIlkv~d~~e~e~~ 93 (771)
....|++.+.||.|+ | +||+|.++ +++.|+||++............+++|+++|+.|+| |||+++++++..+
T Consensus 7 ~~~~y~i~~~lG~G~~g--~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~-- 81 (343)
T 3dbq_A 7 KGRIYSILKQIGSGGSS--KVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD-- 81 (343)
T ss_dssp SSCEEEEEEEESCCSSE--EEEEEECT-TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS--
T ss_pred ecCEEEEEEEEecCCCe--EEEEEEeC-CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeC--
Confidence 456799999999998 8 99999985 68999999998776666667889999999999987 9999999999863
Q ss_pred CcCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 94 DATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
..+|||||+. ++|.+++...... ....+..++.||+.||.|||+ .+++||||||+||+++ +|.+||+|
T Consensus 82 ------~~~~lv~e~~~~~L~~~l~~~~~~---~~~~~~~i~~qi~~al~~lH~-~~iiHrDikp~NIll~-~~~~kl~D 150 (343)
T 3dbq_A 82 ------QYIYMVMECGNIDLNSWLKKKKSI---DPWERKSYWKNMLEAVHTIHQ-HGIVHSDLKPANFLIV-DGMLKLID 150 (343)
T ss_dssp ------SEEEEEECCCSEEHHHHHHHSCCC---CHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEEE-TTEEEECC
T ss_pred ------CEEEEEEeCCCCCHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHh-CCeecCCCCcceEEEE-CCcEEEee
Confidence 4899999977 5799999875432 233456669999999999997 8999999999999996 68899999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhcccccccc-----ccCCCCCcchHHHHHHHHHHHhhCCCCCChh--h
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTA-----VRKSPPWSIDSWGLGCLIYELFSGMRLSKTE--E 245 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~-----~~~~~~~~~Di~SLG~li~el~~g~~p~~~~--~ 245 (771)
||++........ ........++..|+|||++.+.... ....++.++|+|||||++|+|++|..||... .
T Consensus 151 FG~a~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~ 226 (343)
T 3dbq_A 151 FGIANQMQPDTT----SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 226 (343)
T ss_dssp CSSSCCC----------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH
T ss_pred cccccccCcccc----cccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhH
Confidence 999987654211 1111223456699999998641100 0135677999999999999999999988531 1
Q ss_pred ---hh----------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 246 ---LR----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 246 ---l~----------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
+. .....+..+.+++.+||..+|.+||++.++++| +||
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h-p~~ 277 (343)
T 3dbq_A 227 ISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH-PYV 277 (343)
T ss_dssp HHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS-HHH
T ss_pred HHHHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC-ccc
Confidence 10 112344578999999999999999999999998 444
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-34 Score=310.81 Aligned_cols=247 Identities=19% Similarity=0.309 Sum_probs=188.9
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc---------hhHHHHHHHHHHHHhcCCCCCeeEEeee
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ---------DGHLAAARNGVKRLRTVRHPNILAFLHS 87 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~---------~~~~~~~~~ei~~Lk~LrHPnIlkv~d~ 87 (771)
..+|++++.||.|+ | +||+|+++. |..|+||++...... ....+.+.+|++++++++||||++++++
T Consensus 21 ~~~y~~~~~lg~G~~g--~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 97 (362)
T 3pg1_A 21 QSPYTVQRFISSGSYG--AVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDI 97 (362)
T ss_dssp TCSCEEEEEEEEETTE--EEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEE
T ss_pred ccceEEeEEeccCCCE--EEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeee
Confidence 45799999999998 8 999999865 999999999653221 1234778999999999999999999999
Q ss_pred EEecccCcCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC
Q 004157 88 TEVENIDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL 166 (771)
Q Consensus 88 ~e~e~~d~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G 166 (771)
+...... ....+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|
T Consensus 98 ~~~~~~~---~~~~~~lv~e~~~~~l~~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~-~~ivH~Dlkp~NIl~~~~~ 171 (362)
T 3pg1_A 98 FVHFEEP---AMHKLYLVTELMRTDLAQVIHDQRI--VISPQHIQYFMYHILLGLHVLHE-AGVVHRDLHPGNILLADNN 171 (362)
T ss_dssp EEECCTT---TCCEEEEEEECCSEEHHHHHHCTTS--CCCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEECTTC
T ss_pred EEeccCC---CcceEEEEEccCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHH-CcCEecCCChHHEEEcCCC
Confidence 8653311 145899999999 678888875432 12345566779999999999997 8999999999999999999
Q ss_pred cEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh
Q 004157 167 DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL 246 (771)
Q Consensus 167 ~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l 246 (771)
.+||+|||++........ .....++..|+|||++.+. ..++.++|+|||||++|+|++|..||.....
T Consensus 172 ~~kl~Dfg~~~~~~~~~~-------~~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwslG~il~~l~~g~~pf~~~~~ 239 (362)
T 3pg1_A 172 DITICDFNLAREDTADAN-------KTHYVTHRWYRAPELVMQF-----KGFTKLVDMWSAGCVMAEMFNRKALFRGSTF 239 (362)
T ss_dssp CEEECCTTC----------------------CGGGCCHHHHTTC-----TTCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred CEEEEecCcccccccccc-------cceecccceecCcHHhcCC-----CCCCcHhHHHhHHHHHHHHHhCCCCCCCCCH
Confidence 999999999975443211 1122334579999998753 3567899999999999999999998854220
Q ss_pred --------------------------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 247 --------------------------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 247 --------------------------------------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
.....++..+.+++.+||..+|.+||++.++++| +
T Consensus 240 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h-p 318 (362)
T 3pg1_A 240 YNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH-P 318 (362)
T ss_dssp HHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS-G
T ss_pred HHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC-c
Confidence 0012456678999999999999999999999998 6
Q ss_pred CCcc
Q 004157 283 YFQN 286 (771)
Q Consensus 283 fF~n 286 (771)
||++
T Consensus 319 ~f~~ 322 (362)
T 3pg1_A 319 YFES 322 (362)
T ss_dssp GGTT
T ss_pred hhhh
Confidence 6654
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-34 Score=306.49 Aligned_cols=236 Identities=18% Similarity=0.248 Sum_probs=189.8
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccCc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDA 95 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d~ 95 (771)
..+|++.+.||.|+ | +||+|+++.+|+.|+||++.... .+.+.+|+++|++|+ ||||+++++++....
T Consensus 35 ~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~--- 104 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYS--EVFEAINITNNEKVVVKILKPVK-----KKKIKREIKILENLRGGPNIITLADIVKDPV--- 104 (330)
T ss_dssp GGGEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEECSCC-----HHHHHHHHHHHHHHTTSTTBCCEEEEEECTT---
T ss_pred CCceEEEEEecccCCe--EEEEEEECCCCcEEEEEEecccc-----hHHHHHHHHHHHHcCCCCCEEEeeeeeccCC---
Confidence 45799999999998 8 99999999999999999997432 356889999999998 999999999998643
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC-cEEEEc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL-DWKLHA 172 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G-~~KL~d 172 (771)
....|+||||+ ++|..+++.. ....+..++.||+.||.|||+ .+++||||||+||+++.+| .+||+|
T Consensus 105 ---~~~~~lv~e~~~~~~l~~~~~~~------~~~~~~~~~~qi~~~l~~lH~-~~ivH~Dikp~Nil~~~~~~~~kl~D 174 (330)
T 3nsz_A 105 ---SRTPALVFEHVNNTDFKQLYQTL------TDYDIRFYMYEILKALDYCHS-MGIMHRDVKPHNVMIDHEHRKLRLID 174 (330)
T ss_dssp ---TCCEEEEEECCCCCCHHHHGGGC------CHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEEETTTTEEEECC
T ss_pred ---CCceEEEEeccCchhHHHHHHhC------CHHHHHHHHHHHHHHHHHHHh-CCeeeCCCCHHHEEEcCCCCEEEEEe
Confidence 34789999999 4687776542 234466779999999999997 8999999999999999777 899999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh-----hhh
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-----ELR 247 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~-----~l~ 247 (771)
||++........ .....++..|+|||++.+. ..++.++|+|||||++|+|++|..||... .+.
T Consensus 175 fg~a~~~~~~~~-------~~~~~~~~~y~aPE~~~~~-----~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~ 242 (330)
T 3nsz_A 175 WGLAEFYHPGQE-------YNVRVASRYFKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 242 (330)
T ss_dssp CTTCEECCTTCC-------CCSCCSCGGGCCHHHHTTC-----CCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHH
T ss_pred CCCceEcCCCCc-------cccccccccccChhhhcCC-----CcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHH
Confidence 999986654211 1112344579999998653 35778999999999999999999877211 000
Q ss_pred ---------------------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 248 ---------------------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 248 ---------------------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
....++..+.+++.+||..+|.+||++.++|+| +
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h-p 321 (330)
T 3nsz_A 243 RIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH-P 321 (330)
T ss_dssp HHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS-G
T ss_pred HHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC-c
Confidence 001168889999999999999999999999998 5
Q ss_pred CCcc
Q 004157 283 YFQN 286 (771)
Q Consensus 283 fF~n 286 (771)
||++
T Consensus 322 ~f~~ 325 (330)
T 3nsz_A 322 YFYT 325 (330)
T ss_dssp GGTT
T ss_pred cHhh
Confidence 6654
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-34 Score=316.46 Aligned_cols=243 Identities=13% Similarity=0.213 Sum_probs=190.9
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC--------CCCeeEEeee
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR--------HPNILAFLHS 87 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr--------HPnIlkv~d~ 87 (771)
..-+|++.+.||.|+ | +||+|+++.+|+.||||++... ....+.+.+|+++|+.|+ ||||+++++.
T Consensus 35 ~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~ 109 (397)
T 1wak_A 35 FNGRYHVIRKLGWGHFS--TVWLSWDIQGKKFVAMKVVKSA---EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDD 109 (397)
T ss_dssp ETTTEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEE
T ss_pred cCCeEEEEEEeeecCCe--eEEEEEecCCCeEEEEEEEecC---CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecc
Confidence 356799999999998 8 9999999999999999999743 334567889999999996 7889999999
Q ss_pred EEecccCcCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC
Q 004157 88 TEVENIDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL 166 (771)
Q Consensus 88 ~e~e~~d~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G 166 (771)
+.....+ ..++||||||+ ++|.+.+....... .....+..++.||+.||.|||+.++++||||||+||+++.+|
T Consensus 110 ~~~~~~~----~~~~~lv~e~~~~~l~~~~~~~~~~~-~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~ 184 (397)
T 1wak_A 110 FKISGVN----GTHICMVFEVLGHHLLKWIIKSNYQG-LPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNE 184 (397)
T ss_dssp EEEEETT----EEEEEEEECCCCCBHHHHHHHTTTSC-CCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCH
T ss_pred eeecCCC----CceEEEEEeccCccHHHHHHhcccCC-CCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccc
Confidence 9854322 45899999999 56777776543221 234456777999999999999734999999999999999876
Q ss_pred -------------------------------------------------cEEEEccCcccccCCCCCCCCCCcccccccc
Q 004157 167 -------------------------------------------------DWKLHAFDVLSEFDGNNEAANGPMLQYAWLV 197 (771)
Q Consensus 167 -------------------------------------------------~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~ 197 (771)
.+||+|||++....... ....+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~---------~~~~g 255 (397)
T 1wak_A 185 QYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHF---------TEDIQ 255 (397)
T ss_dssp HHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCS---------CSCCS
T ss_pred hhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccC---------ccCCC
Confidence 79999999998764321 11234
Q ss_pred CCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh--------------hccCCC-----------
Q 004157 198 GAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--------------RNTASI----------- 252 (771)
Q Consensus 198 ~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l--------------~~~~~I----------- 252 (771)
+..|+|||++.+ ..++.++|||||||++|+|++|..||..... .....+
T Consensus 256 t~~y~aPE~~~~------~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 329 (397)
T 1wak_A 256 TRQYRSLEVLIG------SGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYS 329 (397)
T ss_dssp CGGGCCHHHHHT------SCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTG
T ss_pred CCcccCChhhcC------CCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhccccc
Confidence 558999999876 3577899999999999999999998853210 000111
Q ss_pred -----------------------------------CcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 253 -----------------------------------PKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 253 -----------------------------------P~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
+..+.+++.+||..||.+||++.++|+| +||+
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h-p~~~ 396 (397)
T 1wak_A 330 KEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH-PWLN 396 (397)
T ss_dssp GGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS-GGGG
T ss_pred ccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC-cccc
Confidence 1346789999999999999999999998 5554
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-34 Score=324.02 Aligned_cols=253 Identities=13% Similarity=0.115 Sum_probs=196.9
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
..+|++.+.||.|+ | +||+|+++.+++.||||++.+.... ......+++|+.+++.++||||++++++++++
T Consensus 73 ~~~y~~~~~LG~G~fG--~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~---- 146 (437)
T 4aw2_A 73 REDFEILKVIGRGAFG--EVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDD---- 146 (437)
T ss_dssp GGGEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECS----
T ss_pred hhheEEEEEEEeCCCE--EEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeC----
Confidence 35799999999998 8 9999999999999999999752111 11223478899999999999999999999874
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+||||||| ++|.++|..... ......+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+||
T Consensus 147 ----~~~~lV~Ey~~gg~L~~~l~~~~~--~l~e~~~~~~~~qi~~aL~~LH~-~giiHrDLKp~NILl~~~g~vkL~DF 219 (437)
T 4aw2_A 147 ----NNLYLVMDYYVGGDLLTLLSKFED--RLPEEMARFYLAEMVIAIDSVHQ-LHYVHRDIKPDNILMDMNGHIRLADF 219 (437)
T ss_dssp ----SEEEEEECCCTTCBHHHHHHTTTT--CCCHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEECTTSCEEECCC
T ss_pred ----CEEEEEEecCCCCcHHHHHHHccC--CCCHHHHHHHHHHHHHHHHHHHh-CCeEecccCHHHeeEcCCCCEEEcch
Confidence 4899999999 589999987321 12345566779999999999997 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------ 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------ 247 (771)
|++........ .......++..|+|||++...- .....++.++|+|||||++|||++|.+||......
T Consensus 220 Gla~~~~~~~~-----~~~~~~~GT~~Y~APE~l~~~~-~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i 293 (437)
T 4aw2_A 220 GSCLKLMEDGT-----VQSSVAVGTPDYISPEILQAME-GGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 293 (437)
T ss_dssp TTCEECCTTSC-----EECCSCCSCGGGCCHHHHHHHH-TSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH
T ss_pred hhhhhcccCCC-----cccccccCCcCeeChHHHhhcc-cCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhh
Confidence 99977654221 1112234556899999986210 00134678999999999999999999998543210
Q ss_pred -----------ccCCCCcchHHHHHHHhccCCCC--CCChHHHhhCCCCCcchhhh
Q 004157 248 -----------NTASIPKSLLPDYQRLLSSMPSR--RLNSSKLIENSEYFQNKLVD 290 (771)
Q Consensus 248 -----------~~~~IP~~l~~~i~~lL~~~P~~--Rps~~~lL~~~~fF~n~lv~ 290 (771)
....++..+.+++++||..+|++ |++++++++| +||++.-.+
T Consensus 294 ~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H-pff~~i~w~ 348 (437)
T 4aw2_A 294 MNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH-PFFSGIDWD 348 (437)
T ss_dssp HTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS-GGGTTCCTT
T ss_pred hhccccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCC-CccCCCCHH
Confidence 01246778999999999888877 9999999998 677654333
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=312.13 Aligned_cols=234 Identities=14% Similarity=0.214 Sum_probs=186.1
Q ss_pred cCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEE
Q 004157 24 GDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITI 102 (771)
Q Consensus 24 ~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~i 102 (771)
.+.||.|+ | +||+|+++.+|+.|+||++..... ...+.+++|+++|++|+||||++++++++.. ..+
T Consensus 94 ~~~lG~G~~g--~Vy~a~~~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~--------~~~ 161 (373)
T 2x4f_A 94 TEILGGGRFG--QVHKCEETATGLKLAAKIIKTRGM--KDKEEVKNEISVMNQLDHANLIQLYDAFESK--------NDI 161 (373)
T ss_dssp EEECC-------CEEEEEETTTCCEEEEEEEECCSH--HHHHHHHHHHHHHTTCCCTTBCCEEEEEECS--------SEE
T ss_pred ceEEecCcCE--EEEEEEEcCCCcEEEEEEEccccc--ccHHHHHHHHHHHHhCCCCCCCeEEEEEEEC--------CEE
Confidence 56799998 8 999999999999999999986432 3456788999999999999999999999863 489
Q ss_pred EEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEE--cCCCcEEEEccCcccc
Q 004157 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV--TQTLDWKLHAFDVLSE 178 (771)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v--~~~G~~KL~dFgla~~ 178 (771)
||||||| ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||++ +.++.+||+|||++..
T Consensus 162 ~lv~E~~~~~~L~~~l~~~~~~--l~~~~~~~i~~qi~~aL~~LH~-~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~ 238 (373)
T 2x4f_A 162 VLVMEYVDGGELFDRIIDESYN--LTELDTILFMKQICEGIRHMHQ-MYILHLDLKPENILCVNRDAKQIKIIDFGLARR 238 (373)
T ss_dssp EEEEECCTTCEEHHHHHHTGGG--CCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEEEETTTTEEEECCCSSCEE
T ss_pred EEEEeCCCCCcHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHH-CCcccccCCHHHEEEecCCCCcEEEEeCCCcee
Confidence 9999999 4798888654321 2233455669999999999997 899999999999999 5678999999999987
Q ss_pred cCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h-------
Q 004157 179 FDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R------- 247 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~------- 247 (771)
...... .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||..... .
T Consensus 239 ~~~~~~-------~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~ 305 (373)
T 2x4f_A 239 YKPREK-------LKVNFGTPEFLAPEVVNY------DFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRW 305 (373)
T ss_dssp CCTTCB-------CCCCCSSCTTCCHHHHTT------CBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCC
T ss_pred cCCccc-------cccccCCCcEeChhhccC------CCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC
Confidence 654221 111235568999999875 3567799999999999999999998854221 1
Q ss_pred -----ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 -----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 -----~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||..+|.+||++.++++| +||.+
T Consensus 306 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~h-p~~~~ 348 (373)
T 2x4f_A 306 DLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKH-PWLSD 348 (373)
T ss_dssp CSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS-HHHHC
T ss_pred CCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcC-cCcCC
Confidence 124578889999999999999999999999999 55544
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-34 Score=325.43 Aligned_cols=239 Identities=18% Similarity=0.246 Sum_probs=196.4
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
..+|++.+.||.|+ | +||+|+++.+|+.|+||++.+.... ......+.+|++++++|+||||++++++++..
T Consensus 25 ~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~---- 98 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFG--EVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDK---- 98 (484)
T ss_dssp HHHEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECS----
T ss_pred cCceEEeeEEecCCCE--EEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeC----
Confidence 44799999999998 8 9999999999999999999865432 23466788999999999999999999999863
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEE---cCCCcEEE
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV---TQTLDWKL 170 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v---~~~G~~KL 170 (771)
..+|+||||| ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||++ +.++.+||
T Consensus 99 ----~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~i~~qi~~~l~~lH~-~~ivH~Dlkp~Nil~~~~~~~~~~kl 170 (484)
T 3nyv_A 99 ----GYFYLVGEVYTGGELFDEIISRKR---FSEVDAARIIRQVLSGITYMHK-NKIVHRDLKPENLLLESKSKDANIRI 170 (484)
T ss_dssp ----SEEEEEECCCCSCBHHHHHHTCSC---CBHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEESSSSTTCCEEE
T ss_pred ----CEEEEEEecCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeeeCCCCHHHEEEecCCCCCcEEE
Confidence 4899999999 579888876543 2344566779999999999997 899999999999999 56789999
Q ss_pred EccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL---- 246 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l---- 246 (771)
+|||++........ .....++..|+|||++.+ .++.++|+|||||++|+|++|.+||.....
T Consensus 171 ~Dfg~a~~~~~~~~-------~~~~~gt~~y~aPE~~~~-------~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~ 236 (484)
T 3nyv_A 171 IDFGLSTHFEASKK-------MKDKIGTAYYIAPEVLHG-------TYDEKCDVWSTGVILYILLSGCPPFNGANEYDIL 236 (484)
T ss_dssp CCTTHHHHBCCCCS-------HHHHTTGGGTCCHHHHHT-------CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred EeeeeeEEcccccc-------cccCCCCccccCceeecC-------CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHH
Confidence 99999987654211 122344568999999865 466799999999999999999999864321
Q ss_pred ------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 247 ------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 247 ------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
.....++..+.+++.+||..+|.+||++.++|+| +||+
T Consensus 237 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h-~~~~ 286 (484)
T 3nyv_A 237 KKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDH-EWIQ 286 (484)
T ss_dssp HHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS-HHHH
T ss_pred HHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC-hhhc
Confidence 1113567889999999999999999999999999 4553
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-33 Score=301.94 Aligned_cols=246 Identities=16% Similarity=0.172 Sum_probs=179.0
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.||.|+ | +||+|+++.+|+.|+||++............++.+...++.++||||+++++++..+
T Consensus 26 ~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~------- 96 (318)
T 2dyl_A 26 DLENLGEMGSGTCG--QVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITN------- 96 (318)
T ss_dssp GEEEEEEC--------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS-------
T ss_pred cccccceeeecCCe--eEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecC-------
Confidence 688899999998 8 999999999999999999987655444455566666788999999999999999863
Q ss_pred ccEEEEEecCCcchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccc
Q 004157 99 KITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (771)
Q Consensus 99 ~~~iyIVtE~v~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~ 178 (771)
..+||||||++.+...+..... .......+..++.||+.||.|||+.++++||||||+||+++.+|.+||+|||++..
T Consensus 97 -~~~~lv~e~~~~~~~~l~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~ 174 (318)
T 2dyl_A 97 -TDVFIAMELMGTCAEKLKKRMQ-GPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGR 174 (318)
T ss_dssp -SEEEEEECCCSEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC--
T ss_pred -CcEEEEEeccCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchh
Confidence 4899999999765544443211 11234556677999999999999634999999999999999999999999999876
Q ss_pred cCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-----hh------
Q 004157 179 FDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-----LR------ 247 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-----l~------ 247 (771)
...... .........|+|||++..... ....++.++|+|||||++|+|++|..||.... +.
T Consensus 175 ~~~~~~-------~~~~~~~~~y~aPE~~~~~~~-~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 246 (318)
T 2dyl_A 175 LVDDKA-------KDRSAGCAAYMAPERIDPPDP-TKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEE 246 (318)
T ss_dssp -------------------CCTTCCHHHHC---------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSC
T ss_pred ccCCcc-------ccccCCCccccChhhcccccc-cccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccC
Confidence 643211 111234558999999853110 01356679999999999999999998885411 10
Q ss_pred -----ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 -----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 -----~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
....+|..+.+++.+||..+|.+||++.++++| +||+
T Consensus 247 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h-~~~~ 288 (318)
T 2dyl_A 247 PPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH-SFIK 288 (318)
T ss_dssp CCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS-HHHH
T ss_pred CCCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC-HHHH
Confidence 113477889999999999999999999999998 4443
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-33 Score=314.89 Aligned_cols=238 Identities=16% Similarity=0.232 Sum_probs=190.8
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC------CCCCeeEEeeeEEe
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV------RHPNILAFLHSTEV 90 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L------rHPnIlkv~d~~e~ 90 (771)
..+|++.+.||.|+ | +||+|.++.+++.||||++... ......+.+|+++++.| .||||+++++.+..
T Consensus 96 ~~ry~~~~~LG~G~fg--~V~~a~~~~~~~~vAvK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~ 170 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFG--QVVKAYDHKVHQHVALKMVRNE---KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTF 170 (429)
T ss_dssp TTTEEEEEEEEESSSE--EEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEE
T ss_pred cCcEEEEEEcccCccE--EEEEEEECCCCcEEEEEEECCc---cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeeccc
Confidence 34699999999998 8 9999999999999999999743 23445677788888877 57799999999987
Q ss_pred cccCcCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCc--
Q 004157 91 ENIDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD-- 167 (771)
Q Consensus 91 e~~d~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~-- 167 (771)
. ..+|||||++ ++|.+++....... .....+..++.||+.||.|||+ .+|+||||||+||+++.+|.
T Consensus 171 ~--------~~~~lv~e~~~~~L~~~l~~~~~~~-~~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlKp~NILl~~~~~~~ 240 (429)
T 3kvw_A 171 R--------NHICMTFELLSMNLYELIKKNKFQG-FSLPLVRKFAHSILQCLDALHK-NRIIHCDLKPENILLKQQGRSG 240 (429)
T ss_dssp T--------TEEEEEECCCCCBHHHHHHHTTTCC-CCHHHHHHHHHHHHHHHHHHHH-HTEECSCCSGGGEEESSTTSCC
T ss_pred C--------CeEEEEEeccCCCHHHHHHhccCCC-CCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeEEccCCCcc
Confidence 4 4899999999 68999998765432 2344566779999999999997 89999999999999999988
Q ss_pred EEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh
Q 004157 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR 247 (771)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~ 247 (771)
+||+|||++...... .....++..|+|||++.+. .++.++|||||||++|||++|.+||......
T Consensus 241 vkL~DFG~a~~~~~~---------~~~~~gt~~y~aPE~~~~~------~~~~~~DiwSlG~il~elltG~~pf~~~~~~ 305 (429)
T 3kvw_A 241 IKVIDFGSSCYEHQR---------VYTYIQSRFYRAPEVILGA------RYGMPIDMWSLGCILAELLTGYPLLPGEDEG 305 (429)
T ss_dssp EEECCCTTCEETTCC---------CCSSCSCGGGCCHHHHHTB------CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred eEEeecccceecCCc---------ccccCCCCCccChHHHhCC------CCCchHHHHhHHHHHHHHHhCCCCCCCCCHH
Confidence 999999999765432 1122445589999998763 5778999999999999999999887532210
Q ss_pred c-----------------------------------------------------------------------cCCCCcch
Q 004157 248 N-----------------------------------------------------------------------TASIPKSL 256 (771)
Q Consensus 248 ~-----------------------------------------------------------------------~~~IP~~l 256 (771)
. ....+..+
T Consensus 306 ~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 385 (429)
T 3kvw_A 306 DQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLF 385 (429)
T ss_dssp HHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHH
T ss_pred HHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHH
Confidence 0 00124457
Q ss_pred HHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 257 LPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 257 ~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
.+++.+||..||.+|||+.++|+| +||++
T Consensus 386 ~dli~~~L~~dP~~Rpta~e~L~H-pw~~~ 414 (429)
T 3kvw_A 386 LDFLKQCLEWDPAVRMTPGQALRH-PWLRR 414 (429)
T ss_dssp HHHHHHHTCSSTTTSCCHHHHHTS-TTTC-
T ss_pred HHHHHHHCCCChhhCCCHHHHhCC-hhhcc
Confidence 899999999999999999999999 56654
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-33 Score=295.20 Aligned_cols=242 Identities=12% Similarity=0.090 Sum_probs=193.8
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEeccc
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENI 93 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~ 93 (771)
+...+|++++.||.|+ | +||+|+++.+|+.|+||++...... ..+++|++.++.+ +||||++++++++..
T Consensus 7 ~~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~~~~~l~~~~~i~~~~~~~~~~-- 78 (298)
T 1csn_A 7 VVGVHYKVGRRIGEGSFG--VIFEGTNLLNNQQVAIKFEPRRSDA----PQLRDEYRTYKLLAGCTGIPNVYYFGQEG-- 78 (298)
T ss_dssp EETTTEEEEEEEEECSSC--EEEEEEETTTTEEEEEEEEECCTTS----CCHHHHHHHHHHTTTCTTCCCEEEEEEET--
T ss_pred ccccceEEEEEEeecCCE--EEEEEEECCCCcEEEEEEeccCCcc----HHHHHHHHHHHHHhcCCCCCeEEeecCCC--
Confidence 3466799999999998 8 9999999999999999999764332 2467899999999 799999999998763
Q ss_pred CcCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCc-----
Q 004157 94 DATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD----- 167 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~----- 167 (771)
...|+||||+ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.
T Consensus 79 ------~~~~lv~e~~~~~L~~~l~~~~~~--~~~~~~~~i~~qi~~~l~~lH~-~~ivH~Dlkp~NIl~~~~~~~~~~~ 149 (298)
T 1csn_A 79 ------LHNVLVIDLLGPSLEDLLDLCGRK--FSVKTVAMAAKQMLARVQSIHE-KSLVYRDIKPDNFLIGRPNSKNANM 149 (298)
T ss_dssp ------TEEEEEEECCCCBHHHHHHHTTTC--CCHHHHHHHHHHHHHHHHHHHT-TTEECCCCCGGGEEECCSSSTTTTC
T ss_pred ------ceeEEEEEecCCCHHHHHHHhccC--CCHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEeccCCCCCCCe
Confidence 4899999999 5799999875321 2344567779999999999996 89999999999999988876
Q ss_pred EEEEccCcccccCCCCCCCCCCcc-ccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-
Q 004157 168 WKLHAFDVLSEFDGNNEAANGPML-QYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE- 245 (771)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~-~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~- 245 (771)
+||+|||++............+.. .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||....
T Consensus 150 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 223 (298)
T 1csn_A 150 IYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLG------REQSRRDDLEALGHVFMYFLRGSLPWQGLKA 223 (298)
T ss_dssp EEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTT------CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCS
T ss_pred EEEEECccccccccccccccccccCccCCCCCcccCCchhhcC------CCCChHHHHHHHHHHHHHHHcCCCCcchhhc
Confidence 999999999877553221111111 122344568999999876 356789999999999999999999885411
Q ss_pred ------h-------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 246 ------L-------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 246 ------l-------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
. .....+|..+.+++.+||+.+|.+||++.++++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~ 277 (298)
T 1csn_A 224 ATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGL 277 (298)
T ss_dssp CCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHH
T ss_pred cccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 0 0113688999999999999999999999998753
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-33 Score=301.23 Aligned_cols=235 Identities=18% Similarity=0.224 Sum_probs=190.6
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
..|++.+.||.|+ | +||.|+++.+|+.|+||++...... ....+.+|+++++.|+||||++++++++..
T Consensus 9 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------ 78 (304)
T 2jam_A 9 KTFIFMEVLGSGAFS--EVFLVKQRLTGKLFALKCIKKSPAF--RDSSLENEIAVLKKIKHENIVTLEDIYEST------ 78 (304)
T ss_dssp HHEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEECC--------HHHHHHHHHHHCCCTTBCCEEEEEECS------
T ss_pred ccceeeeeccCCCCc--eEEEEEECCCCCEEEEEEEeccccc--chHHHHHHHHHHHhCCCCCeeehhhhcccC------
Confidence 4699999999998 8 9999999999999999999864322 235678999999999999999999999863
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEE---cCCCcEEEEc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV---TQTLDWKLHA 172 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v---~~~G~~KL~d 172 (771)
..+|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||++ +.++.+||+|
T Consensus 79 --~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dikp~NIl~~~~~~~~~~kl~D 152 (304)
T 2jam_A 79 --THYYLVMQLVSGGELFDRILERGV---YTEKDASLVIQQVLSAVKYLHE-NGIVHRDLKPENLLYLTPEENSKIMITD 152 (304)
T ss_dssp --SEEEEEECCCCSCBHHHHHHHHSC---CCHHHHHHHHHHHHHHHHHHHH-TTCCCCSCCGGGCEESSSSTTCCEEBCS
T ss_pred --CEEEEEEEcCCCccHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCccccCCCHHHEEEecCCCCCCEEEcc
Confidence 4899999999 479998877543 2344466779999999999997 899999999999999 7889999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-----
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----- 247 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~----- 247 (771)
||++...... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 153 fg~~~~~~~~--------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~ 218 (304)
T 2jam_A 153 FGLSKMEQNG--------IMSTACGTPGYVAPEVLAQ------KPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEK 218 (304)
T ss_dssp CSTTCCCCCB--------TTHHHHSCCCBCCTTTBSS------CSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH
T ss_pred CCcceecCCC--------ccccccCCCCccChHHhcc------CCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence 9998654321 0112234568999999876 35678999999999999999999988543210
Q ss_pred -----------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 248 -----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 248 -----------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
....+|..+.+++.+||..+|.+||++.++++| +||
T Consensus 219 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h-~~~ 265 (304)
T 2jam_A 219 IKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSH-PWI 265 (304)
T ss_dssp HHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS-HHH
T ss_pred HHcCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC-ccc
Confidence 113577889999999999999999999999998 444
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-34 Score=302.38 Aligned_cols=246 Identities=14% Similarity=0.175 Sum_probs=189.5
Q ss_pred CCCCCCCCceecCCCCCCC-CceEEEEeE----ECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeee
Q 004157 13 GAGVKDLPYNIGDPYPSAW-GSWSHFQGT----SKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHS 87 (771)
Q Consensus 13 ~~~~~~~~Y~i~e~ig~G~-g~wtVy~g~----~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~ 87 (771)
...+...+|++.+.||.|+ | +||+|+ +..+++.|+||++... .....+.+.+|++++++|+||||++++++
T Consensus 4 ~~~~~~~~~~~~~~lg~G~~g--~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 79 (295)
T 3ugc_A 4 PTQFEERHLKFLQQLGKGNFG--SVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGV 79 (295)
T ss_dssp --CCCGGGEEEEEEEEECSSE--EEEEEEECTTCSSCCEEEEEEEESCC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred cCcCCHHHhhhhheeeccCCE--EEEEEEEecccCCCCcEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence 3445667899999999998 8 999998 5678999999999753 33456778999999999999999999999
Q ss_pred EEecccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCC
Q 004157 88 TEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT 165 (771)
Q Consensus 88 ~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~ 165 (771)
+...+ ...+||||||+ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.+
T Consensus 80 ~~~~~------~~~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~qi~~~l~~lH~-~~ivH~Dikp~Nil~~~~ 150 (295)
T 3ugc_A 80 CYSAG------RRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYLGT-KRYIHRDLATRNILVENE 150 (295)
T ss_dssp ECHHH------HTSCEEEEECCTTCBHHHHHHHCGGG--CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEEEET
T ss_pred EecCC------CCceEEEEEeCCCCCHHHHHHhcccc--cCHHHHHHHHHHHHHHHHHHhc-CCcccCCCCHhhEEEcCC
Confidence 87544 34689999999 4899999875321 2234456679999999999997 899999999999999999
Q ss_pred CcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh
Q 004157 166 LDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE 245 (771)
Q Consensus 166 G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~ 245 (771)
|.+||+|||++.......... ........+..|+|||++.+ ..++.++|+|||||++|+|++|..++....
T Consensus 151 ~~~kl~Dfg~~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~~l~~g~~~~~~~~ 221 (295)
T 3ugc_A 151 NRVKIGDFGLTKVLPQDKEFF---KVKEPGESPIFWYAPESLTE------SKFSVASDVWSFGVVLYELFTYIEKSKSPP 221 (295)
T ss_dssp TEEEECCCCSCC----------------CTTCGGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHHTTCTTCSHH
T ss_pred CeEEEccCcccccccCCccee---eeccCCCCccceeCcHHhcC------CCCChHHHHHHHHHHHHHHHhcccccCCCh
Confidence 999999999998765422110 00111122336999999876 357789999999999999999987764321
Q ss_pred h-----------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 246 L-----------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 246 l-----------------------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
. .....+|..+.+++.+||+.+|.+||++.++++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~ 285 (295)
T 3ugc_A 222 AEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALR 285 (295)
T ss_dssp HHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred HHHHhhhcCccccchhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 0 0123577889999999999999999999998764
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=314.12 Aligned_cols=245 Identities=17% Similarity=0.268 Sum_probs=189.2
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
....|++.+.||.|+ | +||+|+++.+++ |+||++...... ..+|+++++.|+||||+++++++......
T Consensus 38 ~~~~Y~~~~~lG~G~~g--~V~~a~~~~~~~-~aikk~~~~~~~------~~~E~~il~~l~h~niv~l~~~~~~~~~~- 107 (394)
T 4e7w_A 38 REIAYTNCKVIGNGSFG--VVFQAKLVESDE-VAIKKVLQDKRF------KNRELQIMRIVKHPNVVDLKAFFYSNGDK- 107 (394)
T ss_dssp EEEEEEEEEEEEEETTE--EEEEEEETTTEE-EEEEEEECCTTS------CCHHHHHHHTCCCTTBCCEEEEEEEESSS-
T ss_pred ccceEEEeEEEeeCCCe--EEEEEEECCCCe-EEEEEEecCcch------HHHHHHHHHhCCCCCcceEEEEEEecCCC-
Confidence 355799999999998 8 999999987666 888888653221 23699999999999999999999764321
Q ss_pred CCcccEEEEEecCC-cchHHHHHHh-CCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEc-CCCcEEEEc
Q 004157 96 TSTKITIYIVTEPV-MPLSEKIKEL-GLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT-QTLDWKLHA 172 (771)
Q Consensus 96 ~~~~~~iyIVtE~v-~~L~~~L~~~-~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~-~~G~~KL~d 172 (771)
....++|+||||| +.|...+... ..........++.+++||+.||.|||+ .+++||||||+||+++ .+|.+||+|
T Consensus 108 -~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~-~~ivHrDlkp~Nill~~~~~~~kL~D 185 (394)
T 4e7w_A 108 -KDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS-IGICHRDIKPQNLLLDPPSGVLKLID 185 (394)
T ss_dssp -SSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEEETTTTEEEECC
T ss_pred -CCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH-CCccCCCCCHHHEEEcCCCCcEEEee
Confidence 1134689999999 5565555432 122223445567779999999999997 8999999999999999 799999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----hc
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN 248 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~~ 248 (771)
||+++....... .....++..|+|||++.+. ..++.++|+|||||++|||++|.+||..... ..
T Consensus 186 FG~a~~~~~~~~-------~~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~ 253 (394)
T 4e7w_A 186 FGSAKILIAGEP-------NVSYICSRYYRAPELIFGA-----TNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVE 253 (394)
T ss_dssp CTTCEECCTTCC-------CCSSCSCGGGCCHHHHTTC-----SSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred CCCcccccCCCC-------CcccccCcCccCHHHHcCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 999987644221 1123445689999998653 3577899999999999999999999864220 00
Q ss_pred -------------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 249 -------------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 249 -------------------------------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
...++..+.+++.+||..+|.+||++.++++| +||+.
T Consensus 254 i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h-p~f~~ 327 (394)
T 4e7w_A 254 IIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH-PFFDE 327 (394)
T ss_dssp HHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS-GGGST
T ss_pred HHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC-hhhhh
Confidence 01367789999999999999999999999998 56654
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=302.96 Aligned_cols=242 Identities=13% Similarity=0.174 Sum_probs=192.1
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEE-----CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEe
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTS-----KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~-----k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~ 90 (771)
...+|++++.||.|+ | +||+|++ +.++..|+||++.... .....+.+.+|++++++|+||||+++++++..
T Consensus 21 ~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 97 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFG--KVVKATAFHLKGRAGYTTVAVKMLKENA-SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ 97 (314)
T ss_dssp CGGGEEEEEEEEECSSS--EEEEEEEETGGGCSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS
T ss_pred chhheeeeeeecccCCe--eEEEEEEeccCcccCcceEEEEeccCCC-CHHHHHHHHHHHHHHhhCCCCceeeEEEEEec
Confidence 345799999999998 8 9999987 3456899999997543 33456778999999999999999999999976
Q ss_pred cccCcCCcccEEEEEecCC--cchHHHHHHhCCC---------------------CCCcHHHHHHHHHHHHHHHHHHHcC
Q 004157 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLE---------------------GSQRDEYYAWGLNQIAKAVSFLNND 147 (771)
Q Consensus 91 e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~---------------------~~~~~~~i~~gl~QI~~aL~fLH~~ 147 (771)
. ..+|+||||+ ++|.+++...... .......+..++.||+.||.|||+
T Consensus 98 ~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~- 168 (314)
T 2ivs_A 98 D--------GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE- 168 (314)
T ss_dssp S--------SSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHH-
T ss_pred C--------CceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHH-
Confidence 3 3789999999 5899999875431 112344567779999999999997
Q ss_pred CCceecCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHH
Q 004157 148 CKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGL 227 (771)
Q Consensus 148 ~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SL 227 (771)
.+++||||||+||+++.+|.+||+|||++......... ........+..|+|||++.+ ..++.++|+|||
T Consensus 169 ~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~sl 238 (314)
T 2ivs_A 169 MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSY----VKRSQGRIPVKWMAIESLFD------HIYTTQSDVWSF 238 (314)
T ss_dssp TTEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCE----ECSSCCCSCGGGCCHHHHHH------CEECHHHHHHHH
T ss_pred CCCcccccchheEEEcCCCCEEEccccccccccccccc----eeccCCCCcccccChhhhcC------CCcCchhhHHHH
Confidence 89999999999999999999999999999876542211 01111223347999999876 346679999999
Q ss_pred HHHHHHHhh-CCCCCChhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 228 GCLIYELFS-GMRLSKTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 228 G~li~el~~-g~~p~~~~~l~-------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
||++|+|++ |..||...... ....+|..+.+++.+||+.+|.+||++.+++++
T Consensus 239 G~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~ 305 (314)
T 2ivs_A 239 GVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD 305 (314)
T ss_dssp HHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCCCCHHHHHHHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 999999999 88887542211 124578889999999999999999999999875
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-33 Score=305.20 Aligned_cols=249 Identities=10% Similarity=0.123 Sum_probs=175.9
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEECCCCC---cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEec
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGS---PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~---~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e 91 (771)
+...+|++++.||.|+ | +||+|+++.++. .|+||++..........+.+.+|++++++|+||||+++++++...
T Consensus 20 i~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 97 (323)
T 3qup_A 20 IPEQQFTLGRMLGKGEFG--SVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRS 97 (323)
T ss_dssp CC---CEEEEEEEEETTE--EEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC
T ss_pred cChhHeEEeceecccCCe--EEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecc
Confidence 3456799999999998 8 999999887775 899999986544445577889999999999999999999999764
Q ss_pred ccCcCCcccEEEEEecCC--cchHHHHHHhCCCC---CCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC
Q 004157 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEG---SQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL 166 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~---~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G 166 (771)
...+ .....|+||||+ ++|.+++....... ......+..++.||+.||.|||+ .+++||||||+||+++.+|
T Consensus 98 ~~~~--~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~-~~ivH~Dikp~NIli~~~~ 174 (323)
T 3qup_A 98 RAKG--RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS-RNFIHRDLAARNCMLAEDM 174 (323)
T ss_dssp ---------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEECTTS
T ss_pred cccc--CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHc-CCcccCCCCcceEEEcCCC
Confidence 3110 011349999999 48999887643211 23344566779999999999997 8999999999999999999
Q ss_pred cEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhh
Q 004157 167 DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE 245 (771)
Q Consensus 167 ~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~ 245 (771)
.+||+|||++.......... .......+..|+|||++.+ ..++.++|+|||||++|+|++ |..||....
T Consensus 175 ~~kl~Dfg~a~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~ell~~g~~p~~~~~ 244 (323)
T 3qup_A 175 TVCVADFGLSRKIYSGDYYR----QGCASKLPVKWLALESLAD------NLYTVHSDVWAFGVTMWEIMTRGQTPYAGIE 244 (323)
T ss_dssp CEEECCCCC---------------------CCGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred CEEEeecccccccccccccc----ccccccCcccccCchhhcC------CCCCCccchhhHHHHHHHHHhCCCCCccccC
Confidence 99999999998764422110 0111223347999999876 357789999999999999999 788875422
Q ss_pred h-------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 246 L-------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 246 l-------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
. .....+|..+.+++.+||..+|.+||++.++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 291 (323)
T 3qup_A 245 NAEIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRM 291 (323)
T ss_dssp GGGHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred hHHHHHHHhcCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 1 122467788999999999999999999655543
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-33 Score=305.21 Aligned_cols=248 Identities=17% Similarity=0.235 Sum_probs=181.6
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.+|++.+.||.|+ | +||+|+++.+|+.|+||++...... .....++++.++.++||||+++++++...... ..
T Consensus 23 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~-~~ 96 (360)
T 3e3p_A 23 DRFQVERMAGQGTFG--TVQLGKEKSTGMSVAIKKVIQDPRF---RNRELQIMQDLAVLHHPNIVQLQSYFYTLGER-DR 96 (360)
T ss_dssp TTEEEC------------CEEEEETTTCCEEEEEEEECCTTC---CCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS-CT
T ss_pred cceEEEEEEecCCCe--EEEEEEECCCCCEEEEEEEecCccc---cHHHHHHHHHHHhcCCCCcccHHHhhhccccc-cc
Confidence 3699999999998 8 9999999999999999998754322 22455688889999999999999999753311 11
Q ss_pred cccEEEEEecCC-cchHHHHHHh-CCCCCCcHHHHHHHHHHHHHHHHHHH--cCCCceecCCCCCCEEEcC-CCcEEEEc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKEL-GLEGSQRDEYYAWGLNQIAKAVSFLN--NDCKLVHGNVCLSSVVVTQ-TLDWKLHA 172 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~-~~~~~~~~~~i~~gl~QI~~aL~fLH--~~~~ivH~dIkp~NI~v~~-~G~~KL~d 172 (771)
...++||||||+ +.|...+... ..........+..++.||+.||.||| + .+++||||||+||+++. +|.+||+|
T Consensus 97 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-~~ivH~Dlkp~NIll~~~~~~~kl~D 175 (360)
T 3e3p_A 97 RDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPS-VNVCHRDIKPHNVLVNEADGTLKLCD 175 (360)
T ss_dssp TCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTT-TCCBCSCCCGGGEEEETTTTEEEECC
T ss_pred cceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCC-CCeecCcCCHHHEEEeCCCCcEEEee
Confidence 134589999999 5676665542 22223344556777999999999999 7 89999999999999997 89999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh----c
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----N 248 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~----~ 248 (771)
||++........ .....++..|+|||++.+. ..++.++|+|||||++|+|++|..||...... .
T Consensus 176 fg~a~~~~~~~~-------~~~~~gt~~y~aPE~~~~~-----~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~ 243 (360)
T 3e3p_A 176 FGSAKKLSPSEP-------NVAYICSRYYRAPELIFGN-----QHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHE 243 (360)
T ss_dssp CTTCBCCCTTSC-------CCSTTSCGGGCCHHHHTTC-----SSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred CCCceecCCCCC-------cccccCCcceeCHHHHcCC-----CCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHH
Confidence 999987654221 1122345589999998653 34678999999999999999999988542210 0
Q ss_pred c----------------------------------------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 249 T----------------------------------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 249 ~----------------------------------------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
+ ...+..+.+++.+||+.+|.+||++.++++| +||++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h-p~f~~ 320 (360)
T 3e3p_A 244 IVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH-PYFDE 320 (360)
T ss_dssp HHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS-GGGGG
T ss_pred HHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC-ccccc
Confidence 0 0134578899999999999999999999998 56654
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-33 Score=303.96 Aligned_cols=242 Identities=18% Similarity=0.225 Sum_probs=188.7
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC------chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEec
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA------QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~------~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e 91 (771)
..|++.+.||.|+ | +||+|+++.+|+.|+||++..... .......+.+|+++|+.|+||||++++++++.+
T Consensus 10 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 10 DEYIMSKTLGSGACG--EVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hceeEeeEEecCCCE--EEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 3699999999998 8 999999999999999999975421 112234578899999999999999999998742
Q ss_pred ccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCc--
Q 004157 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD-- 167 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~-- 167 (771)
.+|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.++.
T Consensus 88 ---------~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~NIl~~~~~~~~ 154 (322)
T 2ycf_A 88 ---------DYYIVLELMEGGELFDKVVGNKR---LKEATCKLYFYQMLLAVQYLHE-NGIIHRDLKPENVLLSSQEEDC 154 (322)
T ss_dssp ---------SEEEEEECCTTEETHHHHSTTCC---CCHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEESSSSSSC
T ss_pred ---------ceEEEEecCCCCcHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHEEEecCCCCC
Confidence 479999999 479888865432 2344566679999999999997 89999999999999997765
Q ss_pred -EEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh
Q 004157 168 -WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL 246 (771)
Q Consensus 168 -~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l 246 (771)
+||+|||++....... ......++..|+|||++.+.. ...++.++|+|||||++|+|++|..||.....
T Consensus 155 ~~kl~Dfg~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~---~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 224 (322)
T 2ycf_A 155 LIKITDFGHSKILGETS-------LMRTLCGTPTYLAPEVLVSVG---TAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 224 (322)
T ss_dssp CEEECCCTTCEECCCCH-------HHHHHHSCCTTCCHHHHHHTT---TTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTC
T ss_pred eEEEccCccceeccccc-------ccccccCCcCccCchhhccCC---CCCCCchhhHHHHHHHHHHHHhCCCCCcccch
Confidence 9999999998764321 111223456899999974210 13567899999999999999999988853211
Q ss_pred --------h---------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 247 --------R---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 247 --------~---------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
. ....++..+.+++.+||..+|.+||++.++++| +||++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h-~~~~~ 280 (322)
T 2ycf_A 225 QVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH-PWLQD 280 (322)
T ss_dssp SSCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS-GGGCC
T ss_pred HHHHHHHHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC-cCcCC
Confidence 0 013568889999999999999999999999998 56654
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-34 Score=310.85 Aligned_cols=231 Identities=17% Similarity=0.229 Sum_probs=185.7
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccCcC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d~~ 96 (771)
..|++.+.||.|+ | +||+|+++.+|+.|+||++.+.... ..+|++++.++ +||||+++++++++.
T Consensus 22 ~~y~~~~~lG~G~~g--~V~~~~~~~~~~~~avK~~~~~~~~------~~~E~~~l~~~~~hp~iv~~~~~~~~~----- 88 (342)
T 2qr7_A 22 DGYEVKEDIGVGSYS--VCKRCIHKATNMEFAVKIIDKSKRD------PTEEIEILLRYGQHPNIITLKDVYDDG----- 88 (342)
T ss_dssp HHEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEEETTTCC------CHHHHHHHHHHTTSTTBCCEEEEEECS-----
T ss_pred ccEEEEEEEeeCCCE--EEEEEEECCCCCEEEEEEEEcccCC------hHHHHHHHHHhcCCCCcCeEEEEEEcC-----
Confidence 3699999999998 8 9999999999999999999865332 34688888887 799999999999863
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCC----CcEEE
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT----LDWKL 170 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~----G~~KL 170 (771)
..+||||||| ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||++... +.+||
T Consensus 89 ---~~~~lv~E~~~gg~L~~~i~~~~~---~~~~~~~~~~~qi~~al~~lH~-~givHrDlkp~NIl~~~~~~~~~~~kl 161 (342)
T 2qr7_A 89 ---KYVYVVTELMKGGELLDKILRQKF---FSEREASAVLFTITKTVEYLHA-QGVVHRDLKPSNILYVDESGNPESIRI 161 (342)
T ss_dssp ---SEEEEEECCCCSCBHHHHHHTCTT---CCHHHHHHHHHHHHHHHHHHHH-TTEECSCCCGGGEEESSSSCSGGGEEE
T ss_pred ---CEEEEEEeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCcEeccCCHHHEEEecCCCCcCeEEE
Confidence 4899999999 579998876543 2344566779999999999997 899999999999998543 34999
Q ss_pred EccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-----
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----- 245 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----- 245 (771)
+|||++......... .....++..|+|||++.+. .++.++|+|||||++|+|++|.+||....
T Consensus 162 ~Dfg~a~~~~~~~~~------~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~ 229 (342)
T 2qr7_A 162 CDFGFAKQLRAENGL------LMTPCYTANFVAPEVLERQ------GYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPE 229 (342)
T ss_dssp CCCTTCEECBCTTCC------BCCSSCCSSCCCHHHHHHH------HHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHH
T ss_pred EECCCcccCcCCCCc------eeccCCCccccCHHHhcCC------CCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHH
Confidence 999999876542211 1122345689999998753 35578999999999999999999885311
Q ss_pred -h-h------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 246 -L-R------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 246 -l-~------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
+ . ....++..+.+++.+||..||.+||++.++++|+
T Consensus 230 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp 279 (342)
T 2qr7_A 230 EILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHP 279 (342)
T ss_dssp HHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSH
T ss_pred HHHHHHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCC
Confidence 1 0 0135788899999999999999999999999984
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-33 Score=304.57 Aligned_cols=242 Identities=15% Similarity=0.160 Sum_probs=189.9
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEECCCCCc---EEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEec
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSP---VSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~---VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e 91 (771)
+...+|++.+.||.|+ | +||+|.++.+|+. |+||++.... .....+.+.+|+++|+.|+||||+++++++...
T Consensus 46 ~~~~~y~i~~~lG~G~~g--~V~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 122 (325)
T 3kul_A 46 IEASRIHIEKIIGSGDSG--EVCYGRLRVPGQRDVPVAIKALKAGY-TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRG 122 (325)
T ss_dssp CCGGGEEEEEEEEETTTE--EEEEEEECCTTSCCEEEEEEEECTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGG
T ss_pred cChhHeEEeeEEEeCCCc--EEEEEEEecCCCCCceEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeC
Confidence 3445799999999998 8 9999999877665 9999997543 334567788999999999999999999999763
Q ss_pred ccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEE
Q 004157 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWK 169 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~K 169 (771)
..+||||||+ ++|.++++.... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+|
T Consensus 123 --------~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~L~~LH~-~~ivH~Dlkp~NIll~~~~~~k 191 (325)
T 3kul_A 123 --------RLAMIVTEYMENGSLDTFLRTHDG--QFTIMQLVGMLRGVGAGMRYLSD-LGYVHRDLAARNVLVDSNLVCK 191 (325)
T ss_dssp --------GCCEEEEECCTTCBHHHHHHTTTT--CSCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEECTTCCEE
T ss_pred --------CccEEEeeCCCCCcHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHH-CCeeCCCCCcceEEECCCCCEE
Confidence 4789999999 489999976432 12344566779999999999997 8999999999999999999999
Q ss_pred EEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh--
Q 004157 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL-- 246 (771)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l-- 246 (771)
|+|||++......... .........+..|+|||++.+ ..++.++|+|||||++|+|++ |..||.....
T Consensus 192 l~Dfg~a~~~~~~~~~---~~~~~~~~~t~~y~aPE~~~~------~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~ 262 (325)
T 3kul_A 192 VSDFGLSRVLEDDPDA---AYTTTGGKIPIRWTAPEAIAF------RTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD 262 (325)
T ss_dssp ECCCSSCEECC----C---CEECC---CCGGGSCHHHHHH------CEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH
T ss_pred ECCCCcccccccCccc---eeeccCCCCcccccCHhHhcC------CCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHH
Confidence 9999999876543211 111111122336999999875 356679999999999999998 8888753221
Q ss_pred -----------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 -----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 -----------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....+|..+.+++.+||..+|.+||++.++++.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~ 307 (325)
T 3kul_A 263 VISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSV 307 (325)
T ss_dssp HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHcCCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 1123577889999999999999999999998763
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-33 Score=301.79 Aligned_cols=255 Identities=14% Similarity=0.194 Sum_probs=181.8
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccCc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDA 95 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d~ 95 (771)
..+|++.+.||.|+ | +||+|+++.+|+.|+||++... .......+.+|+.++++++ ||||+++++++.......
T Consensus 27 ~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~ 102 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFA--FVYEAQDVGSGREYALKRLLSN--EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEES 102 (337)
T ss_dssp TEEEEEEEEEECCSSE--EEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTS
T ss_pred CceEEEEEEEccCCce--EEEEEEECCCCcEEEEEEecCC--chHHHHHHHHHHHHHHHhccCCChhhcccccccccccc
Confidence 34799999999998 8 9999999999999999998653 2344567889999999997 999999999985322111
Q ss_pred CCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCC--ceecCCCCCCEEEcCCCcEEEEc
Q 004157 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCK--LVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 96 ~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~--ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
......+|+||||+ ++|.+++.............+..++.||+.||.|||+ .+ ++||||||+||+++.+|.+||+|
T Consensus 103 ~~~~~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~-~~~~ivH~Dikp~NIl~~~~~~~kl~D 181 (337)
T 3ll6_A 103 DTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR-QKPPIIHRDLKVENLLLSNQGTIKLCD 181 (337)
T ss_dssp TTSSEEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHT-SSSCCBCCCCCGGGCEECTTSCEEBCC
T ss_pred ccCCceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh-CCCCEEEccCCcccEEECCCCCEEEec
Confidence 11245799999999 6899988764333334455567779999999999996 78 99999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCc------cccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh
Q 004157 173 FDVLSEFDGNNEAANGPM------LQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL 246 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~------~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l 246 (771)
||++.............. ......++..|+|||++.... ...++.++|+|||||++|+|++|..||.....
T Consensus 182 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~---~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~ 258 (337)
T 3ll6_A 182 FGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYS---NFPIGEKQDIWALGCILYLLCFRQHPFEDGAK 258 (337)
T ss_dssp CTTCBCCSSCC-------------------------------CCT---TSCSSHHHHHHHHHHHHHHHHHSSCCC-----
T ss_pred CccceeccccCcccccccccccchhhccccCCCCcCChhhhhccc---cCCCChHHhHHHHHHHHHHHHhCCCCCcchhH
Confidence 999987654321110000 001223445899999984210 13566799999999999999999998865332
Q ss_pred h----------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 R----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 ~----------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
. ....++..+.+++.+||+.+|.+||++.+++++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 302 (337)
T 3ll6_A 259 LRIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQ 302 (337)
T ss_dssp -------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred HHhhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 1 123456779999999999999999999999876
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-33 Score=300.18 Aligned_cols=247 Identities=15% Similarity=0.187 Sum_probs=190.2
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
+...|++.+.||.|+ | +||+|+++.+|+.|+||++..... ...+.+.+|+++++.++||||+++++++..+
T Consensus 17 ~~~~y~i~~~lg~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---- 88 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFG--KVYKAKNKETGALAAAKVIETKSE--EELEDYIVEIEILATCDHPYIVKLLGAYYHD---- 88 (302)
T ss_dssp GGGTEEEEEEEECSTTC--CEEEEEETTTCCEEEEEEEC------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC----
T ss_pred CccceeecceeccCCCe--EEEEEEEcCCCcEEEEEEecCCCH--HHHHHHHHHHHHHhcCCCCCEeeeeeeeeeC----
Confidence 345799999999998 8 999999999999999999975432 2356788999999999999999999999863
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+|+||||+ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+||
T Consensus 89 ----~~~~lv~e~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~Nil~~~~~~~kl~Df 161 (302)
T 2j7t_A 89 ----GKLWIMIEFCPGGAVDAIMLELDRG--LTEPQIQVVCRQMLEALNFLHS-KRIIHRDLKAGNVLMTLEGDIRLADF 161 (302)
T ss_dssp -----CEEEEEECCTTEEHHHHHHHHTSC--CCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCSGGGEEECTTSCEEECCC
T ss_pred ----CeEEEEEEeCCCCcHHHHHHhhccC--CCHHHHHHHHHHHHHHHHHHhc-CCcccCCCCHHHEEECCCCCEEEEEC
Confidence 3789999999 4688888764321 2344566779999999999997 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------ 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------ 247 (771)
|++........ ......++..|+|||++..... ....++.++|+|||||++|+|++|..|+......
T Consensus 162 g~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~-~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~ 234 (302)
T 2j7t_A 162 GVSAKNLKTLQ------KRDSFIGTPYWMAPEVVMCETM-KDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKI 234 (302)
T ss_dssp HHHHHHHHHHH------C-----CCGGGCCHHHHHHHHT-TSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH
T ss_pred CCCcccccccc------ccccccCChhhcCCeeeccccC-CCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHH
Confidence 98754321100 0011233458999999842100 0135678999999999999999999887542210
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 ---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 ---------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....+|..+.+++.+||..+|.+||++.++++| +||++
T Consensus 235 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h-~~~~~ 281 (302)
T 2j7t_A 235 AKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH-PFVSS 281 (302)
T ss_dssp HHSCCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS-TTTTT
T ss_pred hccCCcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcC-hHHhh
Confidence 113456778999999999999999999999998 56654
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-33 Score=310.66 Aligned_cols=245 Identities=18% Similarity=0.214 Sum_probs=188.6
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC--CCCeeEEeeeEEecccCc
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR--HPNILAFLHSTEVENIDA 95 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr--HPnIlkv~d~~e~e~~d~ 95 (771)
..|++.+.||.|+ | +||+|.++. ++.|+||++..........+.+++|+++|++|+ ||||+++++++..+
T Consensus 56 ~~y~~~~~LG~G~fg--~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~---- 128 (390)
T 2zmd_A 56 RIYSILKQIGSGGSS--KVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD---- 128 (390)
T ss_dssp EEEEEEEEEECCSSE--EEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS----
T ss_pred CceEEEEEEccCCCe--EEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecC----
Confidence 3599999999998 8 999999875 999999999876666666788999999999997 59999999998864
Q ss_pred CCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 96 ~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+|||||+. ++|.+++...... ....+..++.||+.||.|||+ .+|+||||||+||+++ +|.+||+|||
T Consensus 129 ----~~~~lv~E~~~~~L~~~l~~~~~~---~~~~~~~i~~qi~~aL~~lH~-~~ivHrDlkp~NIll~-~~~~kl~DFG 199 (390)
T 2zmd_A 129 ----QYIYMVMECGNIDLNSWLKKKKSI---DPWERKSYWKNMLEAVHTIHQ-HGIVHSDLKPANFLIV-DGMLKLIDFG 199 (390)
T ss_dssp ----SEEEEEEECCSEEHHHHHHHCSSC---CHHHHHHHHHHHHHHHHHHHT-TTCCCCCCCGGGEEES-SSCEEECCCS
T ss_pred ----CEEEEEEecCCCCHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeeecCCCHHHEEEE-CCeEEEEecC
Confidence 3899999966 5799999876422 233455669999999999996 8999999999999995 6899999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccc-----cccCCCCCcchHHHHHHHHHHHhhCCCCCChh--h--
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWT-----AVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE--E-- 245 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~-----~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~--~-- 245 (771)
++........ ........++..|+|||++.+... .....++.++|||||||++|||++|.+||... .
T Consensus 200 ~a~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~ 275 (390)
T 2zmd_A 200 IANQMQPDTT----SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS 275 (390)
T ss_dssp SSCCC-------------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH
T ss_pred ccccccCCCc----cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHH
Confidence 9987653211 111122345568999999864100 00124677999999999999999999988542 1
Q ss_pred -hhc----------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 246 -LRN----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 246 -l~~----------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
+.. ....+..+.+++.+||..+|.+||++.++++| +||
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h-p~~ 324 (390)
T 2zmd_A 276 KLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH-PYV 324 (390)
T ss_dssp HHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS-HHH
T ss_pred HHHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC-cCc
Confidence 110 12234578999999999999999999999998 444
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=317.27 Aligned_cols=243 Identities=17% Similarity=0.205 Sum_probs=186.0
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc------hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEec
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ------DGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~------~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e 91 (771)
..|.+.+.||.|+ | +||+|.++.+++.||||++.+.... ......+.+|+++|++|+||||++++++++.
T Consensus 135 ~~y~~~~~LG~G~~g--~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~- 211 (419)
T 3i6u_A 135 DEYIMSKTLGSGACG--EVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA- 211 (419)
T ss_dssp TTEEEEEEEEECSSS--EEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-
T ss_pred ccEEEEeEEeeCCCe--EEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence 4699999999998 8 9999999999999999999864211 1223357889999999999999999999864
Q ss_pred ccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCc--
Q 004157 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD-- 167 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~-- 167 (771)
..+||||||| ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.++.
T Consensus 212 --------~~~~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~LH~-~~ivHrDlkp~NIll~~~~~~~ 279 (419)
T 3i6u_A 212 --------EDYYIVLELMEGGELFDKVVGNKR---LKEATCKLYFYQMLLAVQYLHE-NGIIHRDLKPENVLLSSQEEDC 279 (419)
T ss_dssp --------SEEEEEEECCTTCBGGGGTSSSCC---CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEESSSSSSC
T ss_pred --------CceEEEEEcCCCCcHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHH-CCccccCCChHhEEEecCCCcc
Confidence 2689999999 478777755432 2344566679999999999997 89999999999999976554
Q ss_pred -EEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh
Q 004157 168 -WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL 246 (771)
Q Consensus 168 -~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l 246 (771)
+||+|||++........ .....++..|+|||++.+.. ...++.++|+|||||++|+|++|.+||.....
T Consensus 280 ~~kl~DFG~a~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~---~~~~~~~~DiwslG~il~~lltg~~pf~~~~~ 349 (419)
T 3i6u_A 280 LIKITDFGHSKILGETSL-------MRTLCGTPTYLAPEVLVSVG---TAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 349 (419)
T ss_dssp CEEECCSSTTTSCC------------------CTTCCTTTTC-------CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSS
T ss_pred eEEEeecccceecCCCcc-------ccccCCCCCccCceeeecCC---CCCCCchhhhHhHHHHHHHHHHCCCCCCCCcc
Confidence 99999999987653211 11234556899999985310 13456799999999999999999998853211
Q ss_pred --------h---------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcch
Q 004157 247 --------R---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNK 287 (771)
Q Consensus 247 --------~---------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n~ 287 (771)
. ....++..+.+++.+||..+|.+||++.++++| +||++.
T Consensus 350 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h-p~~~~~ 406 (419)
T 3i6u_A 350 QVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH-PWLQDE 406 (419)
T ss_dssp SCCHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS-GGGCCH
T ss_pred hHHHHHHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC-cccCCh
Confidence 0 113578889999999999999999999999999 566553
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-33 Score=297.68 Aligned_cols=238 Identities=19% Similarity=0.262 Sum_probs=192.5
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.+|++.+.||.|+ | +||+|+++.+++.|+||++............+.+|++++++|+||||+++++++...
T Consensus 22 ~~y~i~~~lg~G~~g--~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------ 93 (287)
T 2wei_A 22 ERYNIVCMLGKGSFG--EVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDS------ 93 (287)
T ss_dssp HHEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECS------
T ss_pred hcceeeEEEcCCCCE--EEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCC------
Confidence 3699999999998 7 999999999999999999986544444466788999999999999999999999863
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCC---CcEEEEc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT---LDWKLHA 172 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~---G~~KL~d 172 (771)
..+|+|||++ ++|.+.+..... .....+..++.||+.||.|||+ .+++||||+|+||+++.+ +.+||+|
T Consensus 94 --~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~LH~-~~i~H~dl~p~NIlv~~~~~~~~~kL~D 167 (287)
T 2wei_A 94 --SSFYIVGELYTGGELFDEIIKRKR---FSEHDAARIIKQVFSGITYMHK-HNIVHRDLKPENILLESKEKDCDIKIID 167 (287)
T ss_dssp --SEEEEEECCCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEESCSSTTCCEEECS
T ss_pred --CeEEEEEEccCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeeccCCChhhEEEecCCCcccEEEec
Confidence 4899999999 478888876543 2344566779999999999997 899999999999999764 4699999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh------
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------ 246 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l------ 246 (771)
||++........ ......+..|+|||++.+ .++.++|+|||||++|+|++|..||.....
T Consensus 168 fg~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~-------~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~ 233 (287)
T 2wei_A 168 FGLSTCFQQNTK-------MKDRIGTAYYIAPEVLRG-------TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKR 233 (287)
T ss_dssp TTGGGTBCCCSS-------CSCHHHHHTTCCHHHHTT-------CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred cCcceeecCCCc-------cccccCcccccChHHhcC-------CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 999987654211 111123448999999865 356799999999999999999988753221
Q ss_pred ----------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 247 ----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 247 ----------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
.....+|..+.+++.+||..+|.+||++.++++| +||+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h-p~~~ 281 (287)
T 2wei_A 234 VETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH-PWIQ 281 (287)
T ss_dssp HHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS-HHHH
T ss_pred HHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC-HHHh
Confidence 1124577889999999999999999999999998 4443
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-33 Score=304.84 Aligned_cols=241 Identities=15% Similarity=0.142 Sum_probs=190.7
Q ss_pred Cceec-CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccCcC
Q 004157 20 PYNIG-DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 20 ~Y~i~-e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d~~ 96 (771)
.|.+. +.||.|+ | +||+|+++.+|+.|+||++............+.+|+.+++.++ ||||++++++++..
T Consensus 29 ~y~~~~~~lG~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~----- 101 (327)
T 3lm5_A 29 FYILTSKELGRGKFA--VVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENT----- 101 (327)
T ss_dssp HEEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECS-----
T ss_pred EEeeccceeCCCCCe--EEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeC-----
Confidence 47776 7899998 8 9999999999999999999875444444567889999999996 69999999999863
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC---CCcEEEE
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ---TLDWKLH 171 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~---~G~~KL~ 171 (771)
..+|+||||| ++|.+++..... .......+..++.||+.||.|||+ .+++||||||+||+++. +|.+||+
T Consensus 102 ---~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~i~~ql~~~L~~LH~-~givH~Dikp~NIl~~~~~~~~~~kL~ 176 (327)
T 3lm5_A 102 ---SEIILILEYAAGGEIFSLCLPELA-EMVSENDVIRLIKQILEGVYYLHQ-NNIVHLDLKPQNILLSSIYPLGDIKIV 176 (327)
T ss_dssp ---SEEEEEEECCTTEEGGGGGSSCC--CCCCHHHHHHHHHHHHHHHHHHHH-TTEECSCCCGGGEEESCBTTBCCEEEC
T ss_pred ---CeEEEEEEecCCCcHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHH-CCeecCcCChHHEEEecCCCCCcEEEe
Confidence 4899999999 478877754321 123344566779999999999997 89999999999999998 7999999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-----
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----- 246 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----- 246 (771)
|||++........ .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||.....
T Consensus 177 Dfg~a~~~~~~~~-------~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~ 243 (327)
T 3lm5_A 177 DFGMSRKIGHACE-------LREIMGTPEYLAPEILNY------DPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYL 243 (327)
T ss_dssp CGGGCEEC----------------CCCGGGCCHHHHTT------CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred eCccccccCCccc-------cccccCCcCccCCeeecC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHH
Confidence 9999987654211 112234558999999876 3567899999999999999999998854321
Q ss_pred -----------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 247 -----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 247 -----------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
.....++..+.+++.+||..+|.+||++.++++| +||++
T Consensus 244 ~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h-~~~~~ 293 (327)
T 3lm5_A 244 NISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH-SWLQQ 293 (327)
T ss_dssp HHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC-GGGCC
T ss_pred HHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC-Hhhcc
Confidence 1113577789999999999999999999999998 55544
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-33 Score=301.32 Aligned_cols=253 Identities=17% Similarity=0.238 Sum_probs=190.7
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccC
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENID 94 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d 94 (771)
....|++.+.||.|+ | +||+|+++.+|+.|+||++...... ...+.+|++.++++ +||||+++++++......
T Consensus 22 ~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 96 (326)
T 2x7f_A 22 PAGIFELVELVGNGTYG--QVYKGRHVKTGQLAAIKVMDVTGDE---EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 96 (326)
T ss_dssp CTTTEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEECCSST---THHHHHHHHHHHHHCCSTTBCCEEEEEEECC--
T ss_pred CCCcEEEEEEeccCCCE--EEEEEEECCCCCeEEEEEEecCccc---HHHHHHHHHHHHhccCCCCeeeeeeEEeeccCc
Confidence 345799999999998 7 9999999999999999999864332 34678899999999 799999999999864311
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
.....+||||||+ ++|.+++..... .......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|
T Consensus 97 --~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~dlkp~NIl~~~~~~~kl~D 172 (326)
T 2x7f_A 97 --GMDDQLWLVMEFCGAGSVTDLIKNTKG-NTLKEEWIAYICREILRGLSHLHQ-HKVIHRDIKGQNVLLTENAEVKLVD 172 (326)
T ss_dssp --CCCCEEEEEEECCTTEEHHHHHHHSGG-GCCCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCSGGGEEECTTCCEEECC
T ss_pred --cccceEEEEEEcCCCCcHHHHHHhccc-CCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCcHHHEEEcCCCCEEEee
Confidence 0124899999999 489999987431 112344567779999999999997 8999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh------
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------ 246 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l------ 246 (771)
||++......... .....++..|+|||++..... ....++.++|+|||||++|+|++|..||.....
T Consensus 173 fg~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~-~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~ 245 (326)
T 2x7f_A 173 FGVSAQLDRTVGR------RNTFIGTPYWMAPEVIACDEN-PDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFL 245 (326)
T ss_dssp CTTTC-------------------CCGGGCCHHHHC---------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH
T ss_pred CcCceecCcCccc------cccccCCccccChhhhccccc-cCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHH
Confidence 9998766432110 112234458999999863210 013567899999999999999999988754211
Q ss_pred --h------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 247 --R------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 247 --~------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
. ....+|..+.+++.+||..+|.+||++.++++| +||++
T Consensus 246 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h-p~~~~ 292 (326)
T 2x7f_A 246 IPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKH-PFIRD 292 (326)
T ss_dssp HHHSCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS-HHHHC
T ss_pred hhcCccccCCccccCHHHHHHHHHHhccChhhCCCHHHHhhC-hHHhh
Confidence 0 113567889999999999999999999999998 55543
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-33 Score=292.31 Aligned_cols=237 Identities=16% Similarity=0.147 Sum_probs=188.3
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhH-----HHHHHHHHHHHhcCCCCCeeEEeeeEE
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGH-----LAAARNGVKRLRTVRHPNILAFLHSTE 89 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~-----~~~~~~ei~~Lk~LrHPnIlkv~d~~e 89 (771)
+...+|++.+.||.|+ | +||+|+++.+++.|+||++......... .+.+.+|++++++++||||++++++++
T Consensus 16 ~~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 93 (287)
T 4f0f_A 16 LADNEIEYEKQIGKGGFG--LVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH 93 (287)
T ss_dssp CCSTTEEEEEECCCCSSS--CEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEET
T ss_pred hhhccceehhccccCCce--eEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeec
Confidence 4456899999999998 8 9999999999999999999765433211 267889999999999999999999986
Q ss_pred ecccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCC--ceecCCCCCCEEEcCC
Q 004157 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCK--LVHGNVCLSSVVVTQT 165 (771)
Q Consensus 90 ~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~--ivH~dIkp~NI~v~~~ 165 (771)
.. .|+||||+ ++|.+.+..... ......+..++.||+.||.|||+ .+ ++||||||+||+++.+
T Consensus 94 ~~----------~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~lH~-~~~~ivH~dikp~Nil~~~~ 160 (287)
T 4f0f_A 94 NP----------PRMVMEFVPCGDLYHRLLDKAH--PIKWSVKLRLMLDIALGIEYMQN-QNPPIVHRDLRSPNIFLQSL 160 (287)
T ss_dssp TT----------TEEEEECCTTCBHHHHHHCTTS--CCCHHHHHHHHHHHHHHHHHHHT-SSSCCBCSCCSGGGEEESCC
T ss_pred CC----------CeEEEEecCCCCHHHHHhcccC--CccHHHHHHHHHHHHHHHHHHHh-CCCCeecCCCCcceEEEecc
Confidence 53 27999999 579888866432 12344456679999999999996 88 9999999999999988
Q ss_pred Cc-----EEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCC
Q 004157 166 LD-----WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL 240 (771)
Q Consensus 166 G~-----~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p 240 (771)
+. +||+|||++...... .....++..|+|||++.+.. ..++.++|+|||||++|+|++|..|
T Consensus 161 ~~~~~~~~kl~Dfg~~~~~~~~---------~~~~~g~~~y~aPE~~~~~~----~~~~~~~Di~slG~~l~~l~~g~~p 227 (287)
T 4f0f_A 161 DENAPVCAKVADFGLSQQSVHS---------VSGLLGNFQWMAPETIGAEE----ESYTEKADTYSFAMILYTILTGEGP 227 (287)
T ss_dssp CTTCSCCEEECCCTTCBCCSSC---------EECCCCCCTTSCGGGSSCSS----CEECHHHHHHHHHHHHHHHHHSSCT
T ss_pred CCCCceeEEeCCCCcccccccc---------ccccCCCccccCchhhccCC----CCcCchhhHHHHHHHHHHHHcCCCC
Confidence 87 999999998754331 11234456899999984321 2456789999999999999999998
Q ss_pred CChhhh----------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 241 SKTEEL----------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 241 ~~~~~l----------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
|..... .....+|..+.+++.+||+.+|.+||++.++++.
T Consensus 228 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 283 (287)
T 4f0f_A 228 FDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKE 283 (287)
T ss_dssp TTTCCCCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CccccccHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 854211 0114567789999999999999999999998763
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-33 Score=301.69 Aligned_cols=240 Identities=22% Similarity=0.304 Sum_probs=190.6
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEE-CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCC------eeEEeee
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTS-KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPN------ILAFLHS 87 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~-k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPn------Ilkv~d~ 87 (771)
....+|++.+.||.|+ | +||+|.+ +.+|+.|+||++... +...+.+++|+++++.++|++ |++++++
T Consensus 11 ~~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~ 85 (339)
T 1z57_A 11 VLSARYEIVDTLGEGAFG--KVVECIDHKAGGRHVAVKIVKNV---DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEW 85 (339)
T ss_dssp EETTTEEEEEEEEEETTE--EEEEEEETTTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEE
T ss_pred CccCceEEEEEEecCCCe--EEEEEEecCCCCcEEEEEEEecC---CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecc
Confidence 3456899999999998 8 9999998 567899999999742 344667889999999997664 9999999
Q ss_pred EEecccCcCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC--
Q 004157 88 TEVENIDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ-- 164 (771)
Q Consensus 88 ~e~e~~d~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~-- 164 (771)
++.. .++||||||+ ++|.+++....... .....+..++.||+.||.|||+ .+++||||||+||+++.
T Consensus 86 ~~~~--------~~~~lv~e~~~~~l~~~l~~~~~~~-~~~~~~~~~~~qi~~~l~~lH~-~~ivH~Dlkp~Nil~~~~~ 155 (339)
T 1z57_A 86 FEHH--------GHICIVFELLGLSTYDFIKENGFLP-FRLDHIRKMAYQICKSVNFLHS-NKLTHTDLKPENILFVQSD 155 (339)
T ss_dssp EEET--------TEEEEEEECCCCBHHHHHHHTTTCC-CCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEESCCC
T ss_pred cccC--------CcEEEEEcCCCCCHHHHHHhcCCCC-CcHHHHHHHHHHHHHHHHHHHH-CCCcCCCCCHHHEEEeccc
Confidence 9874 4899999999 57999998765322 2344566779999999999997 89999999999999987
Q ss_pred -----------------CCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHH
Q 004157 165 -----------------TLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGL 227 (771)
Q Consensus 165 -----------------~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SL 227 (771)
++.+||+|||++....... ....++..|+|||++.+ ..++.++|+|||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~---------~~~~gt~~y~aPE~~~~------~~~~~~~Di~sl 220 (339)
T 1z57_A 156 YTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHH---------STLVSTRHYRAPEVILA------LGWSQPCDVWSI 220 (339)
T ss_dssp EEEEEC----CEEEEESCCCEEECCCSSCEETTSCC---------CSSCSCGGGCCHHHHTT------SCCCTHHHHHHH
T ss_pred cccccCCccccccccccCCCceEeeCcccccCcccc---------ccccCCccccChHHhhC------CCCCcchhhHHH
Confidence 6789999999997654321 11234458999999876 357789999999
Q ss_pred HHHHHHHhhCCCCCChhhhh--------ccCCC-----------------------------------------------
Q 004157 228 GCLIYELFSGMRLSKTEELR--------NTASI----------------------------------------------- 252 (771)
Q Consensus 228 G~li~el~~g~~p~~~~~l~--------~~~~I----------------------------------------------- 252 (771)
||++|||++|..||...... ....+
T Consensus 221 G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (339)
T 1z57_A 221 GCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDV 300 (339)
T ss_dssp HHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSH
T ss_pred HHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchh
Confidence 99999999999888532210 00111
Q ss_pred -CcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 253 -PKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 253 -P~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
+..+.+++.+||..||.+||++.++++| +||+.
T Consensus 301 ~~~~l~~li~~~L~~dP~~Rpt~~ell~h-p~f~~ 334 (339)
T 1z57_A 301 EHERLFDLIQKMLEYDPAKRITLREALKH-PFFDL 334 (339)
T ss_dssp HHHHHHHHHHHHTCSSTTTSCCHHHHTTS-GGGGG
T ss_pred hHHHHHHHHHHHhCcCcccccCHHHHhcC-HHHHH
Confidence 2457789999999999999999999998 56643
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=310.12 Aligned_cols=246 Identities=17% Similarity=0.254 Sum_probs=191.6
Q ss_pred CCCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-----------CCCee
Q 004157 15 GVKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-----------HPNIL 82 (771)
Q Consensus 15 ~~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-----------HPnIl 82 (771)
.+...+|++.+.||.|+ | +||+|+++.+|+.|+||++... ......+.+|++++++++ ||||+
T Consensus 15 ~~~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~ 89 (373)
T 1q8y_A 15 PYKDARYILVRKLGWGHFS--TVWLAKDMVNNTHVAMKIVRGD---KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHIL 89 (373)
T ss_dssp EETTTTEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBC
T ss_pred cccCCeEEEEEeeeecCCe--EEEEEEecCCCcEEEEEEecCC---ccchhhhhHHHHHHHHhhcccccchhccccchHH
Confidence 34567899999999998 8 9999999999999999999743 234566788999999887 89999
Q ss_pred EEeeeEEecccCcCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEE
Q 004157 83 AFLHSTEVENIDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVV 161 (771)
Q Consensus 83 kv~d~~e~e~~d~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~ 161 (771)
++++++...+.+ ...+|+|||++ ++|.+++....... .....+..++.||+.||.|||+.++++||||||+||+
T Consensus 90 ~~~~~~~~~~~~----~~~~~lv~e~~~~~L~~~~~~~~~~~-~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIl 164 (373)
T 1q8y_A 90 KLLDHFNHKGPN----GVHVVMVFEVLGENLLALIKKYEHRG-IPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVL 164 (373)
T ss_dssp CCCEEEEEEETT----EEEEEEEECCCCEEHHHHHHHTTTSC-CCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEE
T ss_pred HHHHHhhccCCC----CceEEEEEecCCCCHHHHHHHhhccC-CcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeE
Confidence 999999875433 45899999999 57999988754322 2344566779999999999997339999999999999
Q ss_pred Ec------CCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHh
Q 004157 162 VT------QTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELF 235 (771)
Q Consensus 162 v~------~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~ 235 (771)
++ ..+.+||+|||++....... ....++..|+|||++.+ ..++.++|+|||||++|+|+
T Consensus 165 l~~~~~~~~~~~~kl~Dfg~a~~~~~~~---------~~~~~t~~y~aPE~~~~------~~~~~~~Di~slG~il~el~ 229 (373)
T 1q8y_A 165 MEIVDSPENLIQIKIADLGNACWYDEHY---------TNSIQTREYRSPEVLLG------APWGCGADIWSTACLIFELI 229 (373)
T ss_dssp EEEEETTTTEEEEEECCCTTCEETTBCC---------CSCCSCGGGCCHHHHHT------CCCCTHHHHHHHHHHHHHHH
T ss_pred EeccCCCcCcceEEEcccccccccCCCC---------CCCCCCccccCcHHHhC------CCCCchHhHHHHHHHHHHHH
Confidence 95 44579999999998765321 11234558999999876 35778999999999999999
Q ss_pred hCCCCCChhhh--------------hccC----------------------------------------------CCCcc
Q 004157 236 SGMRLSKTEEL--------------RNTA----------------------------------------------SIPKS 255 (771)
Q Consensus 236 ~g~~p~~~~~l--------------~~~~----------------------------------------------~IP~~ 255 (771)
+|..||..... ..+. .++..
T Consensus 230 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (373)
T 1q8y_A 230 TGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKE 309 (373)
T ss_dssp HSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHH
T ss_pred hCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHH
Confidence 99998863220 0001 12345
Q ss_pred hHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 256 LLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 256 l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
+.+++.+||..||.+||++.++++| +||++
T Consensus 310 ~~~li~~~L~~dP~~Rpt~~ell~h-p~f~~ 339 (373)
T 1q8y_A 310 ISDFLSPMLQLDPRKRADAGGLVNH-PWLKD 339 (373)
T ss_dssp HHHHHGGGGCSSTTTCBCHHHHHTC-GGGTT
T ss_pred HHHHHHHHhccCccccCCHHHHhhC-hhhhc
Confidence 6788999999999999999999999 56654
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-33 Score=307.70 Aligned_cols=243 Identities=16% Similarity=0.200 Sum_probs=191.8
Q ss_pred CCCCceecCCCCCCC-CceEEEEeE-----ECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEE
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGT-----SKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTE 89 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~-----~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e 89 (771)
+..+|++++.||.|+ | +||+|+ ++.+++.|+||++.... .....+.+.+|++++++| +||||+++++++.
T Consensus 20 ~~~~y~~~~~lG~G~~g--~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~ 96 (359)
T 3vhe_A 20 PRDRLKLGKPLGRGAFG--QVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACT 96 (359)
T ss_dssp CGGGEEEEEEEEECSSE--EEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cccceeeceeecCCCCc--eEEEEEeccccccccceEEEEEEecCcC-CHHHHHHHHHHHHHHHhhcCCcceeeeeeeee
Confidence 455799999999998 8 999998 56677899999997543 334466789999999999 7999999999987
Q ss_pred ecccCcCCcccEEEEEecCC--cchHHHHHHhCCC---------------------------------------------
Q 004157 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLE--------------------------------------------- 122 (771)
Q Consensus 90 ~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~--------------------------------------------- 122 (771)
..+ ..+||||||| ++|.+++......
T Consensus 97 ~~~-------~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (359)
T 3vhe_A 97 KPG-------GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVE 169 (359)
T ss_dssp STT-------SCCEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------
T ss_pred cCC-------CceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccc
Confidence 642 3589999999 5899999765320
Q ss_pred ------------------CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCCCCC
Q 004157 123 ------------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNE 184 (771)
Q Consensus 123 ------------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~ 184 (771)
.......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++........
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~-~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 248 (359)
T 3vhe_A 170 EKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS-RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248 (359)
T ss_dssp --------------CTTTTCBCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred ccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHH-CCcccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence 002334466779999999999997 8999999999999999999999999999986643211
Q ss_pred CCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh--------------hcc
Q 004157 185 AANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL--------------RNT 249 (771)
Q Consensus 185 ~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l--------------~~~ 249 (771)
........++..|+|||++.+ ..++.++|+|||||++|+|++ |..||..... ...
T Consensus 249 ----~~~~~~~~~t~~y~aPE~~~~------~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 318 (359)
T 3vhe_A 249 ----YVRKGDARLPLKWMAPETIFD------RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 318 (359)
T ss_dssp ----CEEC--CEECGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCC
T ss_pred ----chhccccCCCceeEChhhhcC------CCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCCC
Confidence 011111223447999999876 367789999999999999998 8888754321 112
Q ss_pred CCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 250 ASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 250 ~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
..++..+.+++.+||+.+|.+||++.++++|
T Consensus 319 ~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 349 (359)
T 3vhe_A 319 DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 349 (359)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 3467789999999999999999999999876
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-33 Score=295.71 Aligned_cols=239 Identities=15% Similarity=0.178 Sum_probs=179.5
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEECCCC---CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEec
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDG---SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g---~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e 91 (771)
+...+|++++.||.|+ | +||+|+++.++ ..|+||++... ..+...+.+.+|+..+++++||||+++++++..
T Consensus 12 ~~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~- 87 (281)
T 1mp8_A 12 IQRERIELGRCIGEGQFG--DVHQGIYMSPENPALAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVITE- 87 (281)
T ss_dssp CCGGGEEEEEEEEECSSS--EEEEEEECCC--CCEEEEEEECTTT-TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-
T ss_pred EehHHeEEEeEeeecCCe--eEEEEEEecCCCCceEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCccceEEEEEcc-
Confidence 3445799999999998 8 99999987654 45999998653 233456778999999999999999999999853
Q ss_pred ccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEE
Q 004157 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWK 169 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~K 169 (771)
..+|+||||+ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+|
T Consensus 88 --------~~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~Nil~~~~~~~k 156 (281)
T 1mp8_A 88 --------NPVWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYLES-KRFVHRDIAARNVLVSSNDCVK 156 (281)
T ss_dssp --------SSCEEEEECCTTEEHHHHHHHTTTT--SCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEEEETTEEE
T ss_pred --------CccEEEEecCCCCCHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHh-CCeecccccHHHEEECCCCCEE
Confidence 2579999999 4799999865421 2344466679999999999997 8999999999999999999999
Q ss_pred EEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh--
Q 004157 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL-- 246 (771)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l-- 246 (771)
|+|||++........ ........+..|+|||++.+ ..++.++|+|||||++|+|++ |..||.....
T Consensus 157 l~Dfg~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~ 225 (281)
T 1mp8_A 157 LGDFGLSRYMEDSTY-----YKASKGKLPIKWMAPESINF------RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 225 (281)
T ss_dssp ECC------------------------CCGGGCCHHHHHH------CCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG
T ss_pred ECccccccccCcccc-----cccccCCCcccccChhhccc------CCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH
Confidence 999999987654211 00111122347999999875 356789999999999999996 8878753221
Q ss_pred -----------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 -----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 -----------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....+|..+.+++.+||+.+|.+||++.+++++
T Consensus 226 ~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 270 (281)
T 1mp8_A 226 VIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ 270 (281)
T ss_dssp HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 1124577889999999999999999999998864
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-33 Score=298.38 Aligned_cols=236 Identities=15% Similarity=0.174 Sum_probs=185.1
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
.+|++.+.||.|+ | +||+|+++.+++.|+||++...... ....+.+.+|++.+++++||||++++++++.+
T Consensus 34 ~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~----- 106 (309)
T 2h34_A 34 GPYRLRRLVGRGGMG--DVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEID----- 106 (309)
T ss_dssp CCEEEEEEEEECSSS--EEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEET-----
T ss_pred ccEEEEEEEcCCCCe--eEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeC-----
Confidence 4799999999998 8 9999999999999999999764332 24457788999999999999999999999874
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+|+||||+ ++|.++++.... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 107 ---~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~lH~-~~i~H~dlkp~NIl~~~~~~~kl~Dfg 179 (309)
T 2h34_A 107 ---GQLYVDMRLINGVDLAAMLRRQGP---LAPPRAVAIVRQIGSALDAAHA-AGATHRDVKPENILVSADDFAYLVDFG 179 (309)
T ss_dssp ---TEEEEEEECCCCEEHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEECTTSCEEECSCC
T ss_pred ---CeEEEEEEecCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CcCCcCCCChHHEEEcCCCCEEEecCc
Confidence 4899999999 489999987643 2344566779999999999997 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------- 247 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------- 247 (771)
++......... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 180 ~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~ 248 (309)
T 2h34_A 180 IASATTDEKLT-----QLGNTVGTLYYMAPERFSE------SHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHIN 248 (309)
T ss_dssp C---------------------CCGGGCCGGGTCC----------CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHH
T ss_pred cCccccccccc-----cccccCCCcCccCHHHHcC------CCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhc
Confidence 98766442110 0112234458999999876 35667999999999999999999988643311
Q ss_pred --------ccCCCCcchHHHHHHHhccCCCCCC-ChHHHhh
Q 004157 248 --------NTASIPKSLLPDYQRLLSSMPSRRL-NSSKLIE 279 (771)
Q Consensus 248 --------~~~~IP~~l~~~i~~lL~~~P~~Rp-s~~~lL~ 279 (771)
....+|..+.+++.+||+.+|.+|| ++.++++
T Consensus 249 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~ 289 (309)
T 2h34_A 249 QAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSA 289 (309)
T ss_dssp SCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred cCCCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHH
Confidence 1245788899999999999999999 7887765
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-33 Score=330.43 Aligned_cols=243 Identities=17% Similarity=0.214 Sum_probs=198.2
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccCc
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d~ 95 (771)
.+|++.+.||.|+ | +||+|+++.+++.||||++.+... .+...+.+.+|.++|..+ +||+|+++++++++.
T Consensus 341 ~~f~~~~~LG~G~fG--~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~---- 414 (674)
T 3pfq_A 341 TDFNFLMVLGKGSFG--KVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM---- 414 (674)
T ss_dssp TTEEEEEESSBTTTB--CEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCS----
T ss_pred cceEEEEEEccCCCE--EEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeC----
Confidence 4699999999999 8 999999999999999999985321 112345677899999988 699999999999863
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+||||||+ ++|..+|...... ....+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+||
T Consensus 415 ----~~~~lV~E~~~gg~L~~~l~~~~~~---~~~~~~~~~~qi~~aL~~LH~-~gIiHrDLKp~NILl~~~g~ikL~DF 486 (674)
T 3pfq_A 415 ----DRLYFVMEYVNGGDLMYHIQQVGRF---KEPHAVFYAAEIAIGLFFLQS-KGIIYRDLKLDNVMLDSEGHIKIADF 486 (674)
T ss_dssp ----SEEEEEEECCCSCBHHHHHHHHSSC---CHHHHHHHHHHHHHHHHHHHH-TSEECCCCCSTTEEECSSSCEEECCC
T ss_pred ----CEEEEEEeCcCCCcHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHh-CCeEeccCChhhEEEcCCCcEEEeec
Confidence 4899999999 5899999876532 344466779999999999997 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------ 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------ 247 (771)
|++........ ......++..|+|||++.+ ..++.++|+|||||++|||++|.+||...+..
T Consensus 487 Gla~~~~~~~~------~~~~~~GT~~Y~APE~l~~------~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i 554 (674)
T 3pfq_A 487 GMCKENIWDGV------TTKTFCGTPDYIAPEIIAY------QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSI 554 (674)
T ss_dssp TTCEECCCTTC------CBCCCCSCSSSCCHHHHTC------CCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred ceeeccccCCc------ccccccCCCcccCHhhhcC------CCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHH
Confidence 99986433211 1223345669999999876 46788999999999999999999998653321
Q ss_pred ------ccCCCCcchHHHHHHHhccCCCCCCCh-----HHHhhCCCCCcchh
Q 004157 248 ------NTASIPKSLLPDYQRLLSSMPSRRLNS-----SKLIENSEYFQNKL 288 (771)
Q Consensus 248 ------~~~~IP~~l~~~i~~lL~~~P~~Rps~-----~~lL~~~~fF~n~l 288 (771)
....++..+.+++++||..+|.+|+++ .++++| +||++.-
T Consensus 555 ~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h-~ff~~i~ 605 (674)
T 3pfq_A 555 MEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH-AFFRYID 605 (674)
T ss_dssp HSSCCCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS-GGGSSCC
T ss_pred HhCCCCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC-ccccCCC
Confidence 113567789999999999999999997 888888 7787643
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-33 Score=293.42 Aligned_cols=236 Identities=14% Similarity=0.128 Sum_probs=188.7
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
...+|++.+.||.|+ | +||+|++. +++.|+||++...... .+.+.+|++++++++||||++++++++.+
T Consensus 8 ~~~~y~~~~~lg~G~~g--~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---- 77 (269)
T 4hcu_A 8 DPSELTFVQEIGSGQFG--LVHLGYWL-NKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVCLEQ---- 77 (269)
T ss_dssp CGGGEEEEEEEEECSSC--EEEEEEET-TTEEEEEEEECTTSBC---HHHHHHHHHHHHTCCCTTBCCEEEEECSS----
T ss_pred ChhhceeeheecCCCcc--EEEEEEec-CCCeEEEEEecccccC---HHHHHHHHHHHHhCCCCCEeeEEEEEecC----
Confidence 345799999999998 8 99999987 5778999999865433 24588999999999999999999999763
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+||
T Consensus 78 ----~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~lH~-~~i~H~dikp~Nil~~~~~~~kl~Df 150 (269)
T 4hcu_A 78 ----APICLVFEFMEHGCLSDYLRTQRG--LFAAETLLGMCLDVCEGMAYLEE-ACVIHRDLAARNCLVGENQVIKVSDF 150 (269)
T ss_dssp ----SSEEEEEECCTTCBHHHHHHTTTT--CCCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEECGGGCEEECCT
T ss_pred ----CceEEEEEeCCCCcHHHHHHhcCc--ccCHHHHHHHHHHHHHHHHHHHh-CCeecCCcchheEEEcCCCCEEeccc
Confidence 3789999999 479999976432 12344566679999999999997 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhhh-----
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR----- 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l~----- 247 (771)
|++.......... ......+..|+|||++.+ ..++.++|+|||||++|+|++ |..||......
T Consensus 151 g~~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~ 219 (269)
T 4hcu_A 151 GMTRFVLDDQYTS-----STGTKFPVKWASPEVFSF------SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED 219 (269)
T ss_dssp TGGGGBCCHHHHS-----TTSTTCCGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHH
T ss_pred ccccccccccccc-----ccCcccccccCCHHHhcC------CCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Confidence 9998664321100 111122346999999876 357789999999999999999 88887543211
Q ss_pred --------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 --------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 --------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
....++..+.+++.+||+.+|.+||++.+++++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 260 (269)
T 4hcu_A 220 ISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ 260 (269)
T ss_dssp HHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HhcCccCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 113467789999999999999999999999875
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-33 Score=295.69 Aligned_cols=238 Identities=16% Similarity=0.232 Sum_probs=192.7
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
...+|++.+.||.|+ | +||+|+++.++..|+||++.... ...+.+.+|++++++++||||+++++++..+
T Consensus 11 ~~~~~~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---- 81 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYG--EVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE---- 81 (288)
T ss_dssp CGGGEEEEEESGGGTTC--SEEEEEEGGGTEEEEEEEECSCS---THHHHHHHHHHHHHHCCCTTBCCEEEEECSS----
T ss_pred cccceeEEeecCCCCce--eEEEeEecCCCEEEEEEecCcCH---HHHHHHHHHHHHHHhCCCCCEeeEEEEEccC----
Confidence 455799999999998 8 99999999999999999997532 2456788999999999999999999999763
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+|+||||+ ++|.+++....... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+||
T Consensus 82 ----~~~~~v~e~~~~~~L~~~~~~~~~~~-~~~~~~~~i~~~i~~~l~~lH~-~~i~H~dikp~Nil~~~~~~~~l~Df 155 (288)
T 3kfa_A 82 ----PPFYIITEFMTYGNLLDYLRECNRQE-VSAVVLLYMATQISSAMEYLEK-KNFIHRDLAARNCLVGENHLVKVADF 155 (288)
T ss_dssp ----SSEEEEEECCTTEEHHHHHHHCCTTT-SCHHHHHHHHHHHHHHHHHHHH-HTCCCSCCSGGGEEECGGGCEEECCC
T ss_pred ----CCEEEEEEcCCCCcHHHHHHhcccCC-ccHhHHHHHHHHHHHHHHHHHH-CCccCCCCCcceEEEcCCCCEEEccC
Confidence 3789999999 57999998754322 2344466679999999999997 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhhh-----
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR----- 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l~----- 247 (771)
|++........ ........+..|+|||++.+ ..++.++|+|||||++|+|++ |..||......
T Consensus 156 g~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~ 224 (288)
T 3kfa_A 156 GLSRLMTGDTY-----TAHAGAKFPIKWTAPESLAY------NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL 224 (288)
T ss_dssp CGGGTSCSSSS-----EEETTEEECGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHH
T ss_pred ccceeccCCcc-----ccccCCccccCcCChhhhcc------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 99987654211 11111223347999999876 356789999999999999999 88877542211
Q ss_pred --------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 --------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 --------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
....+|..+.+++.+||..+|.+||++.++++.
T Consensus 225 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~ 265 (288)
T 3kfa_A 225 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQA 265 (288)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HhccCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHH
Confidence 124577889999999999999999999998763
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-33 Score=302.07 Aligned_cols=245 Identities=20% Similarity=0.230 Sum_probs=196.1
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch----hHHHHHHHHHHHHhcCC--CCCeeEEeeeE
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD----GHLAAARNGVKRLRTVR--HPNILAFLHST 88 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~----~~~~~~~~ei~~Lk~Lr--HPnIlkv~d~~ 88 (771)
....+|++++.||.|+ | +||+|+++.+|+.|+||++......+ .....+.+|+.++++++ ||||+++++++
T Consensus 40 ~~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~ 117 (320)
T 3a99_A 40 PLESQYQVGPLLGSGGFG--SVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF 117 (320)
T ss_dssp CCTTTEEEEEECSSSSSC--EEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEE
T ss_pred CccCceEEEEEEeeCCCe--EEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEE
Confidence 3456799999999998 8 99999999999999999998643221 11234667999999997 59999999999
Q ss_pred EecccCcCCcccEEEEEecCC---cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEc-C
Q 004157 89 EVENIDATSTKITIYIVTEPV---MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT-Q 164 (771)
Q Consensus 89 e~e~~d~~~~~~~iyIVtE~v---~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~-~ 164 (771)
+.. ..+|+|||++ ++|.+++...... ....+..++.||+.||.|||+ .+++||||||+||+++ .
T Consensus 118 ~~~--------~~~~lv~e~~~~~~~L~~~l~~~~~l---~~~~~~~i~~qi~~~L~~LH~-~~ivH~Dlkp~NIll~~~ 185 (320)
T 3a99_A 118 ERP--------DSFVLILERPEPVQDLFDFITERGAL---QEELARSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLN 185 (320)
T ss_dssp ECS--------SEEEEEEECCSSEEEHHHHHHHHCSC---CHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEEETT
T ss_pred ecC--------CcEEEEEEcCCCCccHHHHHhccCCC---CHHHHHHHHHHHHHHHHHHHH-CCcEeCCCCHHHEEEeCC
Confidence 863 4899999998 4699998875432 344566679999999999997 8999999999999999 7
Q ss_pred CCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh
Q 004157 165 TLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE 244 (771)
Q Consensus 165 ~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~ 244 (771)
+|.+||+|||++........ ....++..|+|||++.+. ...+.++|+|||||++|||++|..||...
T Consensus 186 ~~~~kL~Dfg~~~~~~~~~~--------~~~~gt~~y~aPE~~~~~-----~~~~~~~Di~slG~il~el~~g~~pf~~~ 252 (320)
T 3a99_A 186 RGELKLIDFGSGALLKDTVY--------TDFDGTRVYSPPEWIRYH-----RYHGRSAAVWSLGILLYDMVCGDIPFEHD 252 (320)
T ss_dssp TTEEEECCCTTCEECCSSCB--------CCCCSCGGGSCHHHHHHS-----CBCHHHHHHHHHHHHHHHHHHSSCSCCSH
T ss_pred CCCEEEeeCccccccccccc--------cCCCCCccCCChHHhccC-----CCCCccchHHhHHHHHHHHHHCCCCCCCh
Confidence 89999999999987654211 112344589999998653 22356889999999999999999988653
Q ss_pred hh------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcchh
Q 004157 245 EL------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKL 288 (771)
Q Consensus 245 ~l------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n~l 288 (771)
.. .....+|..+.+++.+||..+|.+||++.++++| +||++.+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h-p~~~~~~ 301 (320)
T 3a99_A 253 EEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH-PWMQDVL 301 (320)
T ss_dssp HHHHHCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS-GGGSSCC
T ss_pred hhhhcccccccccCCHHHHHHHHHHccCChhhCcCHHHHhcC-HhhcCcc
Confidence 31 1225678899999999999999999999999998 6666543
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-33 Score=304.14 Aligned_cols=242 Identities=15% Similarity=0.157 Sum_probs=191.0
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEEC-----CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEe
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSK-----DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k-----~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~ 90 (771)
...+|++.+.||.|+ | +||+|+++ .+++.|+||++.... .....+.+.+|++++++|+||||++++++++.
T Consensus 45 ~~~~~~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 121 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFG--RVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDNPNIVKLLGVCAV 121 (343)
T ss_dssp CGGGCEEEEEEEECSSC--EEEEEEEETSSTTSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred cHHHCeeeeeeeecCCe--eEEEEEecCcCCCCCceeEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence 345799999999998 8 99999987 345899999997643 33456778999999999999999999999976
Q ss_pred cccCcCCcccEEEEEecCC--cchHHHHHHhCCC---------------------CCCcHHHHHHHHHHHHHHHHHHHcC
Q 004157 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLE---------------------GSQRDEYYAWGLNQIAKAVSFLNND 147 (771)
Q Consensus 91 e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~---------------------~~~~~~~i~~gl~QI~~aL~fLH~~ 147 (771)
. ..+||||||+ ++|.+++...... .......+..++.||+.||.|||+
T Consensus 122 ~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~- 192 (343)
T 1luf_A 122 G--------KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE- 192 (343)
T ss_dssp S--------SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH-
T ss_pred C--------CceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh-
Confidence 3 3789999999 4899999874311 123344566779999999999997
Q ss_pred CCceecCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHH
Q 004157 148 CKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGL 227 (771)
Q Consensus 148 ~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SL 227 (771)
.+++||||||+||+++.+|.+||+|||++.......... .......+..|+|||++.+ ..++.++|+|||
T Consensus 193 ~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~----~~~~~~~t~~y~aPE~~~~------~~~~~~~Di~sl 262 (343)
T 1luf_A 193 RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK----ADGNDAIPIRWMPPESIFY------NRYTTESDVWAY 262 (343)
T ss_dssp TTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC--------CCBCGGGCCHHHHHH------CCCCHHHHHHHH
T ss_pred CCeecCCCCcceEEECCCCeEEEeecCCCcccccCcccc----ccCCCcccceecChhhhcc------CCcCcccccHHH
Confidence 899999999999999999999999999997654321100 0111223447999999876 357789999999
Q ss_pred HHHHHHHhh-CCCCCChhhh-------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 228 GCLIYELFS-GMRLSKTEEL-------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 228 G~li~el~~-g~~p~~~~~l-------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
||++|+|++ |..||..... .....+|..+.+++.+||+.+|.+||++.+++++
T Consensus 263 G~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~ 329 (343)
T 1luf_A 263 GVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRI 329 (343)
T ss_dssp HHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHhcCCCcCCCCChHHHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence 999999998 8877754221 1124567789999999999999999999998764
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-32 Score=294.07 Aligned_cols=239 Identities=17% Similarity=0.220 Sum_probs=183.4
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
.+|++.+.||.|+ | +||+|.++.+|+.|+||++..... .......+.+|++++++|+||||+++++++..+
T Consensus 32 ~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----- 104 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFS--EVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIED----- 104 (310)
T ss_dssp GGEEEEEEEECC--C--EEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEET-----
T ss_pred cceEEEEeecCCCCc--eEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcC-----
Confidence 3699999999998 8 999999999999999999986432 334567788999999999999999999999864
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCC-CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+|+||||+ ++|.+++..... ........+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+||
T Consensus 105 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~-~~i~H~dl~p~NIl~~~~~~~kl~Df 180 (310)
T 2wqm_A 105 ---NELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS-RRVMHRDIKPANVFITATGVVKLGDL 180 (310)
T ss_dssp ---TEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEECTTSCEEECCC
T ss_pred ---CcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhh-CCeeCCCCcHHHEEEcCCCCEEEEec
Confidence 4899999999 489998876321 1222344566779999999999997 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------- 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l------- 246 (771)
|++......... .....+...|+|||++.+ ..++.++|+|||||++|+|++|..||.....
T Consensus 181 g~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~ 248 (310)
T 2wqm_A 181 GLGRFFSSKTTA------AHSLVGTPYYMSPERIHE------NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCK 248 (310)
T ss_dssp ------------------------CCSSCCHHHHTT------CCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHH
T ss_pred cceeeecCCCcc------ccccCCCeeEeChHHhCC------CCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHH
Confidence 998766432110 112234558999999876 3567899999999999999999988754211
Q ss_pred --hc-------cCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 --RN-------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 --~~-------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.. ...+|..+.+++.+||..+|.+||++.++++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~ 291 (310)
T 2wqm_A 249 KIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDV 291 (310)
T ss_dssp HHHTTCSCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HhhcccCCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 00 13467789999999999999999999998864
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-33 Score=301.03 Aligned_cols=239 Identities=15% Similarity=0.169 Sum_probs=186.5
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCc----EEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEec
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSP----VSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~----VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e 91 (771)
....|++.+.||.|+ | +||+|+++.+++. |++|.+...... .....+.+|+..++.++||||++++++++.
T Consensus 11 ~~~~y~~~~~lG~G~~g--~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~- 86 (325)
T 3kex_A 11 KETELRKLKVLGSGVFG--TVHKGVWIPEGESIKIPVCIKVIEDKSGR-QSFQAVTDHMLAIGSLDHAHIVRLLGLCPG- 86 (325)
T ss_dssp CTTTEEEEEEEECCSSC--EEEEEEECCTTCSCCEEEEEEEECCTTSC-SCBCSCCHHHHHHHTCCCTTBCCEEEEECB-
T ss_pred CHhHceeeeeeeecCCc--eEEEEEEcCCCceEEEEEEEEeccccccH-HHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-
Confidence 456899999999998 8 9999999988887 677776543222 223456789999999999999999998863
Q ss_pred ccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEE
Q 004157 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWK 169 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~K 169 (771)
..+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+|
T Consensus 87 --------~~~~~v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~-~~ivH~Dikp~Nil~~~~~~~k 155 (325)
T 3kex_A 87 --------SSLQLVTQYLPLGSLLDHVRQHRG--ALGPQLLLNWGVQIAKGMYYLEE-HGMVHRNLAARNVLLKSPSQVQ 155 (325)
T ss_dssp --------SSEEEEEECCTTCBSHHHHHSSGG--GSCTTHHHHHHHHHHHHHHHHHH-TTCCCSCCSSTTEEESSSSCEE
T ss_pred --------CccEEEEEeCCCCCHHHHHHHccc--cCCHHHHHHHHHHHHHHHHHHHh-CCCCCCccchheEEECCCCeEE
Confidence 2689999999 589999876421 11223355669999999999997 8999999999999999999999
Q ss_pred EEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh--
Q 004157 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL-- 246 (771)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l-- 246 (771)
|+|||++......... ........+..|+|||++.+ ..++.++|+|||||++|+|++ |..||.....
T Consensus 156 l~Dfg~a~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~ 225 (325)
T 3kex_A 156 VADFGVADLLPPDDKQ----LLYSEAKTPIKWMALESIHF------GKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE 225 (325)
T ss_dssp ECSCSGGGGSCCCTTC----CC-----CCTTTSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH
T ss_pred ECCCCcccccCccccc----ccccCCCCcccccChHHhcc------CCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH
Confidence 9999999877543211 11112233348999999876 357789999999999999999 8888864321
Q ss_pred -----------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 -----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 -----------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....++..+..++.+||..+|.+||++.+++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~ 270 (325)
T 3kex_A 226 VPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANE 270 (325)
T ss_dssp HHHHHHTTCBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred HHHHHHcCCCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 1123467789999999999999999999999875
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-33 Score=292.66 Aligned_cols=240 Identities=21% Similarity=0.228 Sum_probs=190.0
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc--
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA-- 95 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~-- 95 (771)
.+|++.+.||.|+ | +||+|+++.+|+.|+||++.... +.+.+|++++++|+||||++++++++....+.
T Consensus 11 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (284)
T 2a19_B 11 MDFKEIELIGSGGFG--QVFKAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPET 82 (284)
T ss_dssp HHEEEEEEEECSSSC--CEEEEEETTTCCEEEEEEEECCS------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---
T ss_pred cccceeeeeccCCce--EEEEEEEcCCCeEEEEEEecccc------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccc
Confidence 4699999999998 8 99999999999999999998642 23568999999999999999999986521100
Q ss_pred ------CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCc
Q 004157 96 ------TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD 167 (771)
Q Consensus 96 ------~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~ 167 (771)
......+|+||||+ ++|.+++...... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.
T Consensus 83 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~-~~i~H~dlkp~Nil~~~~~~ 160 (284)
T 2a19_B 83 SSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE-KLDKVLALELFEQITKGVDYIHS-KKLINRDLKPSNIFLVDTKQ 160 (284)
T ss_dssp ------CCEEEEEEEEECCCCSCBHHHHHHHGGGS-CCCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEEEETTE
T ss_pred ccccccccCcceEEEEEeccCCCCHHHHHhhccCC-CCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCCHHHEEEcCCCC
Confidence 00134789999999 4899999765321 12344466679999999999997 89999999999999999999
Q ss_pred EEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh--
Q 004157 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-- 245 (771)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-- 245 (771)
+||+|||++........ .....++..|+|||++.+ ..++.++|+|||||++|+|++|..++....
T Consensus 161 ~kl~Dfg~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~ 227 (284)
T 2a19_B 161 VKIGDFGLVTSLKNDGK-------RTRSKGTLRYMSPEQISS------QDYGKEVDLYALGLILAELLHVCDTAFETSKF 227 (284)
T ss_dssp EEECCCTTCEESSCCSC-------CCCCCSCCTTSCHHHHHC------SCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHH
T ss_pred EEECcchhheecccccc-------ccccCCcccccChhhhcc------CCCcchhhhHHHHHHHHHHHhcCCcchhHHHH
Confidence 99999999987654221 112234568999999876 356789999999999999999987763221
Q ss_pred ---hh---ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 246 ---LR---NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 246 ---l~---~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
+. ....+|..+.+++.+||+.+|.+||++.+++++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l 269 (284)
T 2a19_B 228 FTDLRDGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTL 269 (284)
T ss_dssp HHHHHTTCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHhhcccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 11 1245678899999999999999999999998763
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-32 Score=290.20 Aligned_cols=251 Identities=17% Similarity=0.207 Sum_probs=185.9
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc-----
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI----- 93 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~----- 93 (771)
+|++.+.||.|+ | +||+|+++.+|+.|+||++.. .......+.+|+++++.++||||+++++++.....
T Consensus 7 ~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (303)
T 1zy4_A 7 DFEEIAVLGQGAFG--QVVKARNALDSRYYAIKKIRH---TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPM 81 (303)
T ss_dssp HEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEE---EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC--
T ss_pred cchhhheeccCCcE--EEEEEEEcCCCeEEEEEEEec---cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhh
Confidence 599999999998 8 999999999999999999964 23456778899999999999999999998865311
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEE
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~ 171 (771)
+.......+|+||||+ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+
T Consensus 82 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~i~~qi~~~l~~LH~-~~i~H~dlkp~Nil~~~~~~~kl~ 158 (303)
T 1zy4_A 82 TAVKKKSTLFIQMEYCENGTLYDLIHSENLN--QQRDEYWRLFRQILEALSYIHS-QGIIHRDLKPMNIFIDESRNVKIG 158 (303)
T ss_dssp ----CEEEEEEEEECCCSCBHHHHHHHSCGG--GCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEECTTSCEEEC
T ss_pred cccccCCceEEEEecCCCCCHHHhhhccccc--cchHHHHHHHHHHHHHHHHHHh-CCeecccCCHHhEEEcCCCCEEEe
Confidence 0001145899999999 4899999865421 2234456679999999999997 899999999999999999999999
Q ss_pred ccCcccccCCCCCCCC-------C-CccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCCh
Q 004157 172 AFDVLSEFDGNNEAAN-------G-PMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT 243 (771)
Q Consensus 172 dFgla~~~~~~~~~~~-------~-~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~ 243 (771)
|||++........... + ........++..|+|||++.+. ..++.++|+|||||++|+|+++ +...
T Consensus 159 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~slG~il~~l~~p--~~~~ 231 (303)
T 1zy4_A 159 DFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGT-----GHYNEKIDMYSLGIIFFEMIYP--FSTG 231 (303)
T ss_dssp CCCCCSCTTC-------------------------CTTSCHHHHTSC-----SCCCTHHHHHHHHHHHHHHHSC--CSSH
T ss_pred eCcchhhcccccchhccccccccccccccccCCCcccccCcccccCC-----CCCcchhhHHHHHHHHHHHHhc--cCCc
Confidence 9999987653211000 0 0001122344589999998752 3567899999999999999983 2221
Q ss_pred hh-------hhc---------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 244 EE-------LRN---------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 244 ~~-------l~~---------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
.. +.. ...++..+.+++.+||..+|.+||++.++++| +||..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h-~~~~~ 289 (303)
T 1zy4_A 232 MERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS-GWLPV 289 (303)
T ss_dssp HHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS-SCSCC
T ss_pred hhHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC-CCcCC
Confidence 11 110 12344558999999999999999999999999 55543
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-32 Score=295.70 Aligned_cols=243 Identities=17% Similarity=0.151 Sum_probs=173.5
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHH-HHhcCCCCCeeEEeeeEEecccC
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVK-RLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~-~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
....|++.+.||.|+ | +||+|+++.+|+.|+||++........ ...+.+|+. .++.++||||+++++++..+
T Consensus 20 ~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~-~~~~~~e~~~~~~~~~h~niv~~~~~~~~~--- 93 (327)
T 3aln_A 20 TAEDLKDLGEIGRGAYG--SVNKMVHKPSGQIMAVKRIRSTVDEKE-QKQLLMDLDVVMRSSDCPYIVQFYGALFRE--- 93 (327)
T ss_dssp CSCSEEC-CEEEECSSE--EEEEEEETTTTEEEEEEEEECCCCHHH-HHHHHHHHHHHHSSCCCTTBCCEEEEEECS---
T ss_pred CHHHhhehheeccCCCE--EEEEEEEcCCCCEEEEEEeecccCchH-HHHHHHHHHHHHHcCCCCcEeeeeeEEEeC---
Confidence 345799999999998 8 999999999999999999986543333 334444554 78889999999999999864
Q ss_pred cCCcccEEEEEecCC-cchHHHHHHhC--CCCCCcHHHHHHHHHHHHHHHHHHHcCC-CceecCCCCCCEEEcCCCcEEE
Q 004157 95 ATSTKITIYIVTEPV-MPLSEKIKELG--LEGSQRDEYYAWGLNQIAKAVSFLNNDC-KLVHGNVCLSSVVVTQTLDWKL 170 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v-~~L~~~L~~~~--~~~~~~~~~i~~gl~QI~~aL~fLH~~~-~ivH~dIkp~NI~v~~~G~~KL 170 (771)
..+||||||+ ++|.+++.... .........+..++.|++.||.|||+ . +++||||||+||+++.+|.+||
T Consensus 94 -----~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~-~~~ivH~dlkp~NIll~~~~~~kl 167 (327)
T 3aln_A 94 -----GDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE-NLKIIHRDIKPSNILLDRSGNIKL 167 (327)
T ss_dssp -----SEEEEEECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHH-HHSCCCSCCCGGGEEEETTTEEEE
T ss_pred -----CceEEEEeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhc-cCCEeECCCCHHHEEEcCCCCEEE
Confidence 3899999999 67877776421 12223455567779999999999997 6 9999999999999999999999
Q ss_pred EccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-----
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----- 245 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----- 245 (771)
+|||++........ .....++..|+|||++..... ...++.++|+|||||++|+|++|..||....
T Consensus 168 ~Dfg~~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~--~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~ 238 (327)
T 3aln_A 168 CDFGISGQLVDSIA-------KTRDAGCRPYMAPERIDPSAS--RQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQ 238 (327)
T ss_dssp CCCSSSCC---------------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------
T ss_pred ccCCCceecccccc-------cccCCCCccccCceeeccccC--cCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHH
Confidence 99999977643211 111234458999999843110 1356789999999999999999998875421
Q ss_pred hhc-------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 246 LRN-------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 246 l~~-------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
+.. ...++..+.+++.+||..+|.+||++.++++|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 239 LTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp -CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 111 02467789999999999999999999999998
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-33 Score=307.36 Aligned_cols=244 Identities=16% Similarity=0.245 Sum_probs=191.2
Q ss_pred CCceecCCCCCCC-CceEEEEeEEC---CCCCcEEEEEEeCCCC--chhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEec
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSK---DDGSPVSIFSISGTNA--QDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVE 91 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k---~~g~~VaIK~~~~~~~--~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e 91 (771)
.+|++.+.||.|+ | +||+|++. .+|+.|+||++.+... .....+.+++|+++|+.+ .||||++++++++.+
T Consensus 54 ~~y~~~~~lG~G~~g--~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 131 (355)
T 1vzo_A 54 ENFELLKVLGTGAYG--KVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE 131 (355)
T ss_dssp GGEEEEEEEEETTTE--EEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEET
T ss_pred cceEEEEEeccCCCE--EEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeC
Confidence 4799999999998 8 99999984 5799999999875321 112234567799999999 599999999999874
Q ss_pred ccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEE
Q 004157 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWK 169 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~K 169 (771)
..+||||||| ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+|
T Consensus 132 --------~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~-~~ivH~Dlkp~NIll~~~~~~k 199 (355)
T 1vzo_A 132 --------TKLHLILDYINGGELFTHLSQRER---FTEHEVQIYVGEIVLALEHLHK-LGIIYRDIKLENILLDSNGHVV 199 (355)
T ss_dssp --------TEEEEEECCCCSCBHHHHHHHHSC---CCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEECTTSCEE
T ss_pred --------ceEEEEeecCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECCCCcEE
Confidence 4899999999 489999987643 2344566779999999999997 8999999999999999999999
Q ss_pred EEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh---
Q 004157 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--- 246 (771)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l--- 246 (771)
|+|||+++....... .......++..|+|||++.+.. ..++.++|+|||||++|+|++|..||.....
T Consensus 200 l~DfG~a~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~----~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~ 270 (355)
T 1vzo_A 200 LTDFGLSKEFVADET-----ERAYDFCGTIEYMAPDIVRGGD----SGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS 270 (355)
T ss_dssp ESCSSEEEECCGGGG-----GGGCGGGSCCTTCCHHHHTTCC-------CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC
T ss_pred EeeCCCCeecccCCC-----CcccCcccCcCccChhhhcCCC----CCCCchhhHHHHHHHHHHHHHCCCCCccCCccch
Confidence 999999986643211 1122334566999999987521 2456789999999999999999988853211
Q ss_pred ---------h----ccCCCCcchHHHHHHHhccCCCCCC-----ChHHHhhCCCCCcc
Q 004157 247 ---------R----NTASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENSEYFQN 286 (771)
Q Consensus 247 ---------~----~~~~IP~~l~~~i~~lL~~~P~~Rp-----s~~~lL~~~~fF~n 286 (771)
. ....++..+.+++.+||..+|.+|| ++.++++| .||..
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h-~~f~~ 327 (355)
T 1vzo_A 271 QAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH-LFFQK 327 (355)
T ss_dssp HHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS-GGGTT
T ss_pred HHHHHHHHhccCCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC-cchhc
Confidence 0 1134567788999999999999999 99999998 56654
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-33 Score=291.14 Aligned_cols=237 Identities=16% Similarity=0.183 Sum_probs=188.5
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
+...+|++.+.||.|+ | +||+|.++ ++..|+||++...... .+.+.+|++.+++++||||+++++++..+
T Consensus 5 l~~~~y~~~~~lg~G~~g--~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--- 75 (268)
T 3sxs_A 5 LKREEITLLKELGSGQFG--VVKLGKWK-GQYDVAVKMIKEGSMS---EDEFFQEAQTMMKLSHPKLVKFYGVCSKE--- 75 (268)
T ss_dssp CCGGGEEEEEEEEEETTE--EEEEEEET-TTEEEEEEEECBTTBC---HHHHHHHHHHHHHCCCTTBCCEEEEECSS---
T ss_pred echhheeeeeeeccCCCc--eEEEEEec-CceeEEEEEeccCCCc---HHHHHHHHHHHHhCCCCCEeeEEEEEccC---
Confidence 3456799999999998 8 99999877 5778999999765433 34578899999999999999999999763
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
..+|+||||+ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|
T Consensus 76 -----~~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~i~~qi~~~l~~lH~-~~i~H~dikp~Nil~~~~~~~~l~D 147 (268)
T 3sxs_A 76 -----YPIYIVTEYISNGCLLNYLRSHGKG--LEPSQLLEMCYDVCEGMAFLES-HQFIHRDLAARNCLVDRDLCVKVSD 147 (268)
T ss_dssp -----SSEEEEEECCTTCBHHHHHHHHGGG--CCHHHHHHHHHHHHHHHHHHHH-TTEEESSCSGGGEEECTTCCEEECC
T ss_pred -----CceEEEEEccCCCcHHHHHHHcCCC--CCHHHHHHHHHHHHHHHHHHHH-CCeecCCcCcceEEECCCCCEEEcc
Confidence 3789999999 4699999775321 2334466779999999999997 8999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhhh----
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR---- 247 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l~---- 247 (771)
||++......... .......+..|+|||++.+ ..++.++|+|||||++|+|++ |..||......
T Consensus 148 fg~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~ 216 (268)
T 3sxs_A 148 FGMTRYVLDDQYV-----SSVGTKFPVKWSAPEVFHY------FKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVL 216 (268)
T ss_dssp TTCEEECCTTCEE-----ECCSCCCCGGGCCHHHHHH------SEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH
T ss_pred Cccceecchhhhh-----cccCCCcCcccCCHHHHhc------cCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHH
Confidence 9999876542111 1111122336999999876 245679999999999999998 88887532211
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 ---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 ---------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
....+|..+.+++.+||+.+|.+||++.+++++
T Consensus 217 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 258 (268)
T 3sxs_A 217 KVSQGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSS 258 (268)
T ss_dssp HHHTTCCCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHHcCCCCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 123457789999999999999999999999875
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-32 Score=289.41 Aligned_cols=240 Identities=12% Similarity=0.051 Sum_probs=187.6
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
..+|++++.||.|+ | +||+|+++.+++.|+||++....... .+.+|+++++.++|++++..+..+..+
T Consensus 8 ~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~~l~~l~~~~~i~~~~~~~~~----- 76 (296)
T 4hgt_A 8 GNRYRLGRKIGSGSFG--DIYLGTDIAAGEEVAIKLECVKTKHP----QLHIESKIYKMMQGGVGIPTIRWCGAE----- 76 (296)
T ss_dssp ---CEEEEEEEECSSS--EEEEEEETTTTEEEEEEEEEC---CC----CHHHHHHHHHHHTTSTTCCCEEEEEEE-----
T ss_pred CCceEEeeeecCCCCe--EEEEEEEcCCCceEEEEeecccccch----HHHHHHHHHHHhcCCCCCCeeeeecCC-----
Confidence 45799999999998 8 99999999999999999987643332 467899999999999888877777543
Q ss_pred CcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEE---cCCCcEEEEc
Q 004157 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV---TQTLDWKLHA 172 (771)
Q Consensus 97 ~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v---~~~G~~KL~d 172 (771)
....||||||+ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||++ +.+|.+||+|
T Consensus 77 --~~~~~lv~e~~~~~L~~~~~~~~~~--~~~~~~~~i~~qi~~~l~~LH~-~~ivH~Dlkp~NIl~~~~~~~~~~kL~D 151 (296)
T 4hgt_A 77 --GDYNVMVMELLGPSLEDLFNFCSRK--FSLKTVLLLADQMISRIEYIHS-KNFIHRDVKPDNFLMGLGKKGNLVYIID 151 (296)
T ss_dssp --TTEEEEEEECCCCBHHHHHHHTTSC--CCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEECCGGGTTCEEECC
T ss_pred --CCceEEEEEccCCCHHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeeeeccCCCCeEEEec
Confidence 34889999999 5799998854321 2344566779999999999997 899999999999999 7899999999
Q ss_pred cCcccccCCCCCCCCCCccc-cccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-----
Q 004157 173 FDVLSEFDGNNEAANGPMLQ-YAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----- 246 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~-~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----- 246 (771)
||++............++.. ....++..|+|||++.+ ..++.++|+|||||++|+|++|..||.....
T Consensus 152 fg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~ 225 (296)
T 4hgt_A 152 FGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLG------IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ 225 (296)
T ss_dssp CTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTT------CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSS
T ss_pred CccceeccCcccCccCCCCcccccCCCccccchHHhcC------CCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhh
Confidence 99998765532211111111 12234458999999876 3567899999999999999999998854210
Q ss_pred ----------h-----ccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 247 ----------R-----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 247 ----------~-----~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
. ....+|..+.+++.+||+.+|.+||++.++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~ 273 (296)
T 4hgt_A 226 KYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ 273 (296)
T ss_dssp HHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred hhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence 0 11567899999999999999999999999876
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-33 Score=308.06 Aligned_cols=244 Identities=14% Similarity=0.156 Sum_probs=189.0
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeE-----ECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEE
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGT-----SKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTE 89 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~-----~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e 89 (771)
+...+|++++.||.|+ | +||+|+ +..++..|+||++.... .......+.+|+.++++|+||||+++++++.
T Consensus 68 ~~~~~~~~~~~LG~G~fg--~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~ 144 (367)
T 3l9p_A 68 VPRKNITLIRGLGHGAFG--EVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFNHQNIVRCIGVSL 144 (367)
T ss_dssp CCGGGEEEEEECCCCSSS--CEEEEEECC-----CCEEEEEEECCSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cCHhHeEEeeEeeeCCCE--EEEEEEEccCCCCCcceeEEEEeccccc-ChhhHHHHHHHHHHHHhCCCCCCCeEEEEEe
Confidence 3345799999999999 8 999999 44567799999987533 3344556888999999999999999999997
Q ss_pred ecccCcCCcccEEEEEecCC--cchHHHHHHhCCC----CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEc
Q 004157 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLE----GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT 163 (771)
Q Consensus 90 ~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~----~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~ 163 (771)
.. ...||||||| ++|.++++..... .......+..++.||+.||.|||+ .+++||||||+||+++
T Consensus 145 ~~--------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIll~ 215 (367)
T 3l9p_A 145 QS--------LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE-NHFIHRDIAARNCLLT 215 (367)
T ss_dssp SS--------SSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEES
T ss_pred cC--------CCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHh-CCeeCCCCChhhEEEe
Confidence 63 3679999999 4899999876421 122344466679999999999997 8999999999999999
Q ss_pred CCCc---EEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCC
Q 004157 164 QTLD---WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMR 239 (771)
Q Consensus 164 ~~G~---~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~ 239 (771)
.+|. +||+|||+++......... ......++..|+|||++.+ ..++.++|+|||||++|||++ |..
T Consensus 216 ~~~~~~~~kL~DFG~a~~~~~~~~~~----~~~~~~~t~~y~aPE~~~~------~~~~~~~DvwslG~il~ellt~g~~ 285 (367)
T 3l9p_A 216 CPGPGRVAKIGDFGMARDIYRAGYYR----KGGCAMLPVKWMPPEAFME------GIFTSKTDTWSFGVLLWEIFSLGYM 285 (367)
T ss_dssp CSSTTCCEEECCCHHHHHHHHHSSCT----TCCGGGSCGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred cCCCCceEEECCCccccccccccccc----cCCCcCCcccEECHHHhcC------CCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 6665 9999999997543211100 0111233458999999876 357789999999999999998 888
Q ss_pred CCChhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 240 LSKTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 240 p~~~~~l~-------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
||...... ....+|..+.+++.+||+.+|.+||++.+++++.
T Consensus 286 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l 340 (367)
T 3l9p_A 286 PYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 340 (367)
T ss_dssp SSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHH
Confidence 87543211 1245778899999999999999999999999863
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-33 Score=298.49 Aligned_cols=238 Identities=12% Similarity=0.121 Sum_probs=186.3
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.+|++.+.||.|+ | +||+|+++ +|+.|+||++..... ...+.+.+|+++++.++||||+++++++...
T Consensus 39 ~~y~~~~~lg~G~~g--~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------ 107 (321)
T 2qkw_B 39 NNFDHKFLIGHGVFG--KVYKGVLR-DGAKVALKRRTPESS--QGIEEFETEIETLSFCRHPHLVSLIGFCDER------ 107 (321)
T ss_dssp CCCSCCCCSCBCSSS--EEEEEECT-TCCEEEEEECCSCCS--SHHHHHHHHHHGGGSCCCTTBCCEEEECCCT------
T ss_pred hccCccceeecCCCe--eEEEEEEC-CCCEEEEEEecccCh--HHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC------
Confidence 4799999999998 8 99999965 689999999875432 3456789999999999999999999998763
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCC-CCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEG-SQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~-~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+|+||||+ ++|.+++....... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 108 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~-~~ivH~dlkp~Nil~~~~~~~kl~Dfg 184 (321)
T 2qkw_B 108 --NEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT-RAIIHRDVKSINILLDENFVPKITDFG 184 (321)
T ss_dssp --TCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHH-TTEECSCCCSTTEEECTTCCEEECCCT
T ss_pred --CeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcC-CCeecCCCCHHHEEECCCCCEEEeecc
Confidence 3789999999 47988886544221 23344566779999999999997 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------- 247 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------- 247 (771)
++......... .......++..|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 185 ~~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~ 254 (321)
T 2qkw_B 185 ISKKGTELDQT----HLSTVVKGTLGYIDPEYFIK------GRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAE 254 (321)
T ss_dssp TCEECSSSSCC----CCBCCCEEETTTCCHHHHHH------CBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHH
T ss_pred ccccccccccc----ccccccCCCccccCHHHhcC------CCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHH
Confidence 99765432111 01112234568999999875 35678999999999999999999887432110
Q ss_pred ------------cc------CC----CCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 ------------NT------AS----IPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 ------------~~------~~----IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.. .. ++..+.+++.+||..+|.+||++.+++++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 309 (321)
T 2qkw_B 255 WAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWK 309 (321)
T ss_dssp HTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 00 01 22347788899999999999999999875
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-33 Score=298.91 Aligned_cols=242 Identities=19% Similarity=0.226 Sum_probs=187.6
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch----hHHHHHHHHHHHHhcC----CCCCeeEEeee
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD----GHLAAARNGVKRLRTV----RHPNILAFLHS 87 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~----~~~~~~~~ei~~Lk~L----rHPnIlkv~d~ 87 (771)
...+|++++.||.|+ | +||+|+++.+|+.|+||++....... .....+.+|++.++++ +||||++++++
T Consensus 29 ~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 29 FEAEYRLGPLLGKGGFG--TVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ----CEEEEEEEEETTE--EEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhceEEeeEEEcCCCE--EEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 345799999999998 8 99999999999999999997653321 1233456799999998 89999999999
Q ss_pred EEecccCcCCcccEEEEEecC-C--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEc-
Q 004157 88 TEVENIDATSTKITIYIVTEP-V--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT- 163 (771)
Q Consensus 88 ~e~e~~d~~~~~~~iyIVtE~-v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~- 163 (771)
+... ..+|+|+|+ + ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++
T Consensus 107 ~~~~--------~~~~~v~e~~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~Nil~~~ 174 (312)
T 2iwi_A 107 FETQ--------EGFMLVLERPLPAQDLFDYITEKGP---LGEGPSRCFFGQVVAAIQHCHS-RGVVHRDIKDENILIDL 174 (312)
T ss_dssp C-------------CEEEEECCSSEEEHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHH-HTEECCCCSGGGEEEET
T ss_pred EecC--------CeEEEEEEecCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeeecCCChhhEEEeC
Confidence 9764 378999999 4 579999987653 2344566779999999999997 8999999999999999
Q ss_pred CCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCCh
Q 004157 164 QTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT 243 (771)
Q Consensus 164 ~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~ 243 (771)
.+|.+||+|||++........ ....+...|+|||++.+. ...+.++|+|||||++|+|++|..+|..
T Consensus 175 ~~~~~kl~dfg~~~~~~~~~~--------~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~slG~il~~l~~g~~pf~~ 241 (312)
T 2iwi_A 175 RRGCAKLIDFGSGALLHDEPY--------TDFDGTRVYSPPEWISRH-----QYHALPATVWSLGILLYDMVCGDIPFER 241 (312)
T ss_dssp TTTEEEECCCSSCEECCSSCB--------CCCCSCTTTSCHHHHHHS-----CBCHHHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred CCCeEEEEEcchhhhcccCcc--------cccCCcccccCceeeecC-----CCCCccchHHHHHHHHHHHHHCCCCCCC
Confidence 899999999999987654211 122345589999998653 2233579999999999999999998864
Q ss_pred hhh------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 244 EEL------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 244 ~~l------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
... .....++..+.+++.+||..+|.+||++.++++| +||+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~-~~~~~ 289 (312)
T 2iwi_A 242 DQEILEAELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD-PWMQT 289 (312)
T ss_dssp HHHHHHTCCCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS-TTTCC
T ss_pred hHHHhhhccCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcC-hhhcC
Confidence 321 1124577889999999999999999999999999 55654
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-33 Score=299.91 Aligned_cols=243 Identities=14% Similarity=0.194 Sum_probs=185.0
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
...+|++.+.||.|+ | +||+|+++ ++.||||++... ........+|+.++++|+||||+++++++......
T Consensus 22 ~~~~y~~~~~lg~G~~g--~Vy~~~~~--~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~- 93 (322)
T 3soc_A 22 QSMPLQLLEVKARGRFG--CVWKAQLL--NEYVAVKIFPIQ---DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSV- 93 (322)
T ss_dssp TTEEEEEEEEEECSTTC--EEEEEEET--TEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSS-
T ss_pred chhhchhhheecccCce--EEEEEEEC--CCEEEEEEeecC---chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCC-
Confidence 345799999999998 8 99999876 799999999643 22344556799999999999999999999875422
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCC----------CceecCCCCCCEEEc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDC----------KLVHGNVCLSSVVVT 163 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~----------~ivH~dIkp~NI~v~ 163 (771)
...+|+||||| ++|.++++...+ ....+..++.||+.||.|||+ . +++||||||+||+++
T Consensus 94 ---~~~~~lv~e~~~~g~L~~~l~~~~~----~~~~~~~i~~qi~~al~~LH~-~~~~l~~~~~~~ivH~Dlkp~Nill~ 165 (322)
T 3soc_A 94 ---DVDLWLITAFHEKGSLSDFLKANVV----SWNELCHIAETMARGLAYLHE-DIPGLKDGHKPAISHRDIKSKNVLLK 165 (322)
T ss_dssp ---SEEEEEEEECCTTCBHHHHHHHCCB----CHHHHHHHHHHHHHHHHHHTC-CEEEETTEEECEEECSCCSGGGEEEC
T ss_pred ---CceEEEEEecCCCCCHHHHHHhcCC----CHHHHHHHHHHHHHHHHHHHh-hccccccccCCCEEeCCCChHhEEEC
Confidence 34689999999 489999987543 334466679999999999996 7 999999999999999
Q ss_pred CCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCCh
Q 004157 164 QTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT 243 (771)
Q Consensus 164 ~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~ 243 (771)
.+|.+||+|||++.......... ......++..|+|||++.+... ....++.++|+|||||++|||++|..||..
T Consensus 166 ~~~~~kL~DFg~a~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~-~~~~~~~~~DiwslG~il~el~tg~~pf~~ 240 (322)
T 3soc_A 166 NNLTACIADFGLALKFEAGKSAG----DTHGQVGTRRYMAPEVLEGAIN-FQRDAFLRIDMYAMGLVLWELASRCTAADG 240 (322)
T ss_dssp TTCCEEECCCTTCEEECTTSCCC----CCTTCCCCGGGCCHHHHTTCCC-CCHHHHHHHHHHHHHHHHHHHHTTBTTSSS
T ss_pred CCCeEEEccCCcccccccccCcc----ccccCccCccccCHhhcccccc-cCcCCCccchhHHHHHHHHHHHhCCCCCCC
Confidence 99999999999998765432110 1112234558999999875210 001233578999999999999999887743
Q ss_pred hh-------------------hh------c-cCCCC---------cchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 244 EE-------------------LR------N-TASIP---------KSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 244 ~~-------------------l~------~-~~~IP---------~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.. +. . ...++ ..+.+++.+||+.+|.+||++.++++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 312 (322)
T 3soc_A 241 PVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGER 312 (322)
T ss_dssp CCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 21 00 0 01111 238889999999999999999998864
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-32 Score=298.70 Aligned_cols=247 Identities=10% Similarity=0.075 Sum_probs=188.9
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCC-----CCcEEEEEEeCCCCchh-H--------HHHHHHHHHHHhcCCCCCee
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDD-----GSPVSIFSISGTNAQDG-H--------LAAARNGVKRLRTVRHPNIL 82 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~-----g~~VaIK~~~~~~~~~~-~--------~~~~~~ei~~Lk~LrHPnIl 82 (771)
...|++++.||.|+ | +||+|+++.+ ++.|+||++........ . .....+|+..++.++||||+
T Consensus 34 ~~~y~~~~~lG~G~~g--~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv 111 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFG--CIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVP 111 (364)
T ss_dssp CCEEEEEEECCCC-CC--EEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSC
T ss_pred CCeEEEEEEEecCCCe--EEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCC
Confidence 44799999999998 8 9999999865 58999999986532110 0 11233466678888999999
Q ss_pred EEeeeEEecccCcCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEE
Q 004157 83 AFLHSTEVENIDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVV 161 (771)
Q Consensus 83 kv~d~~e~e~~d~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~ 161 (771)
++++++..+..+ ..++||||||| ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+
T Consensus 112 ~~~~~~~~~~~~----~~~~~lv~e~~g~~L~~~~~~~~~--~l~~~~~~~i~~qi~~~l~~lH~-~~iiHrDlkp~Nil 184 (364)
T 3op5_A 112 KYWGSGLHDKNG----KSYRFMIMDRFGSDLQKIYEANAK--RFSRKTVLQLSLRILDILEYIHE-HEYVHGDIKASNLL 184 (364)
T ss_dssp CEEEEEEEEETT----EEEEEEEEECEEEEHHHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEE
T ss_pred eEEeeeeeccCC----cceEEEEEeCCCCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHH-CCeEEecCCHHHEE
Confidence 999999875422 35789999999 579999987532 12344566779999999999997 89999999999999
Q ss_pred Ec--CCCcEEEEccCcccccCCCCCCCCCCc-cccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCC
Q 004157 162 VT--QTLDWKLHAFDVLSEFDGNNEAANGPM-LQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM 238 (771)
Q Consensus 162 v~--~~G~~KL~dFgla~~~~~~~~~~~~~~-~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~ 238 (771)
++ .+|.+||+|||+++.+........... ......++..|+|||++.+ ..++.++|+|||||++|||++|.
T Consensus 185 l~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~~g~ 258 (364)
T 3op5_A 185 LNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNG------VAPSRRGDLEILGYCMIQWLTGH 258 (364)
T ss_dssp EESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTT------CCCCHHHHHHHHHHHHHHHHHSC
T ss_pred EecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCC------CCCCchhhHHHHHHHHHHHHhCC
Confidence 99 889999999999987654221111000 0122335569999999876 35778999999999999999999
Q ss_pred CCCChhh----------------hhc-------cCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 239 RLSKTEE----------------LRN-------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 239 ~p~~~~~----------------l~~-------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.||.... +.. ...+|..+..++.+|+..+|..||++.++++
T Consensus 259 ~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~ 322 (364)
T 3op5_A 259 LPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRD 322 (364)
T ss_dssp CTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred CCccccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence 9986421 000 1567999999999999999999999998875
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-33 Score=296.76 Aligned_cols=242 Identities=15% Similarity=0.173 Sum_probs=192.2
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEE-----CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEE
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTS-----KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTE 89 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~-----k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e 89 (771)
+..+|++++.||.|+ | +||+|++ ..+++.|+||++..... ....+.+.+|++++++| +||||++++++++
T Consensus 21 ~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 97 (313)
T 1t46_A 21 PRNRLSFGKTLGAGAFG--KVVEATAYGLIKSDAAMTVAVKMLKPSAH-LTEREALMSELKVLSYLGNHMNIVNLLGACT 97 (313)
T ss_dssp CGGGEEEEEEEEECSSE--EEEEEEEESSSSTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred ChhhhhHHHhhCccCCc--ceEEEEEeeccccchhhhhHHHhcCcchh-HHHHHHHHHHHHHHhhcccCCCeeeEEEEEe
Confidence 345799999999998 8 9999984 45678999999986533 23467789999999999 8999999999997
Q ss_pred ecccCcCCcccEEEEEecCC--cchHHHHHHhCCC---------------CCCcHHHHHHHHHHHHHHHHHHHcCCCcee
Q 004157 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLE---------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVH 152 (771)
Q Consensus 90 ~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~---------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH 152 (771)
.. ...|+||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++|
T Consensus 98 ~~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~H 168 (313)
T 1t46_A 98 IG--------GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS-KNCIH 168 (313)
T ss_dssp SS--------SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH-TTCCC
T ss_pred cC--------CCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHH-CCeec
Confidence 64 3689999999 4899999875421 113345567779999999999997 89999
Q ss_pred cCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHH
Q 004157 153 GNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIY 232 (771)
Q Consensus 153 ~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~ 232 (771)
|||||+||+++.+|.+||+|||++......... ........+..|+|||++.+ ..++.++|+|||||++|
T Consensus 169 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~ 238 (313)
T 1t46_A 169 RDLAARNILLTHGRITKICDFGLARDIKNDSNY----VVKGNARLPVKWMAPESIFN------CVYTFESDVWSYGIFLW 238 (313)
T ss_dssp SCCSGGGEEEETTTEEEECCCGGGSCTTSCTTS----EECSSSEECGGGCCHHHHHH------CCCCHHHHHHHHHHHHH
T ss_pred CCCccceEEEcCCCCEEEccccccccccccccc----eeccCCCCcceeeChHHhcC------CCCChHHHHHHHHHHHH
Confidence 999999999999999999999999876543210 00111223347999999876 35778999999999999
Q ss_pred HHhh-CCCCCChhhh--------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 233 ELFS-GMRLSKTEEL--------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 233 el~~-g~~p~~~~~l--------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
+|++ |..||..... .....+|..+.+++.+||..+|.+||++.+++++
T Consensus 239 ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 301 (313)
T 1t46_A 239 ELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL 301 (313)
T ss_dssp HHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHhCCCCCCCcccchhHHHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 9998 8888754221 0124577889999999999999999999999875
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-33 Score=294.67 Aligned_cols=239 Identities=14% Similarity=0.151 Sum_probs=186.5
Q ss_pred CCCceecC-CCCCCC-CceEEEEeE--ECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 18 DLPYNIGD-PYPSAW-GSWSHFQGT--SKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 18 ~~~Y~i~e-~ig~G~-g~wtVy~g~--~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
...|++.+ .||.|+ | +||+|. .+.+++.|+||++..........+.+.+|+++++.++||||++++++++.
T Consensus 15 ~~~y~~~~~~lg~G~~g--~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--- 89 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFG--TVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA--- 89 (291)
T ss_dssp GGGEEEEEEEEEECSSE--EEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES---
T ss_pred chhhhhccCccccccCe--eeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECC---
Confidence 34699988 899998 7 999994 45678899999998654444557789999999999999999999999843
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEE
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~ 171 (771)
..+|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+
T Consensus 90 ------~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~LH~-~~i~H~dikp~Nil~~~~~~~kl~ 159 (291)
T 1xbb_A 90 ------ESWMLVMEMAELGPLNKYLQQNRH---VKDKNIIELVHQVSMGMKYLEE-SNFVHRDLAARNVLLVTQHYAKIS 159 (291)
T ss_dssp ------SSEEEEEECCTTEEHHHHHHHCTT---CCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEEEETTEEEEC
T ss_pred ------CCcEEEEEeCCCCCHHHHHHhCcC---CCHHHHHHHHHHHHHHHHHHHh-CCeEcCCCCcceEEEeCCCcEEEc
Confidence 3689999999 579999987542 2344566779999999999997 899999999999999999999999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh----
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL---- 246 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l---- 246 (771)
|||++........... .......+..|+|||++.+. .++.++|+|||||++|+|++ |..||.....
T Consensus 160 Dfg~~~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~ 230 (291)
T 1xbb_A 160 DFGLSKALRADENYYK---AQTHGKWPVKWYAPECINYY------KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 230 (291)
T ss_dssp CCTTCEECCTTCSEEE---C----CCCGGGCCHHHHHHC------EEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH
T ss_pred cCCcceeeccCCCccc---ccccCCCCceeeChHHhccC------CCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHH
Confidence 9999987654221100 01111223479999998652 45578999999999999999 8888754221
Q ss_pred ---------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 ---------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 ---------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....+|..+.+++.+||+.+|.+||++.++++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~ 273 (291)
T 1xbb_A 231 AMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELR 273 (291)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred HHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 1124577889999999999999999999998763
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-33 Score=291.91 Aligned_cols=236 Identities=13% Similarity=0.135 Sum_probs=185.2
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
...+|++.+.||.|+ | +||.|.++ ++..|+||++...... .+.+.+|+++++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g--~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---- 91 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFG--VVKYGKWR-GQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLSHEKLVQLYGVCTKQ---- 91 (283)
T ss_dssp CGGGEEEEEECC---CE--EEEEEEET-TTEEEEEEEECTTSBC---HHHHHHHHHHHHTCCCTTBCCEEEEECSS----
T ss_pred CHHHHHhHhhcCCCCCc--eEEEEEEc-CCCeEEEEEecCCCCC---HHHHHHHHHHHhcCCCCCEeeEEEEEecC----
Confidence 344799999999998 8 99999887 6778999999865433 24578899999999999999999999763
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+|+||||+ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+||
T Consensus 92 ----~~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~i~~qi~~~l~~lH~-~~i~H~dikp~Nili~~~~~~kl~Df 164 (283)
T 3gen_A 92 ----RPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLES-KQFLHRDLAARNCLVNDQGVVKVSDF 164 (283)
T ss_dssp ----SSEEEEECCCTTCBHHHHHHCGGGC--CCHHHHHHHHHHHHHHHHHHHH-TTCCCSSCSGGGEEECTTSCEEECST
T ss_pred ----CCeEEEEeccCCCcHHHHHHHhccC--CCHHHHHHHHHHHHHHHHHHHH-CCccCCCCccceEEEcCCCCEEEccc
Confidence 4789999999 5799999763221 2344566779999999999997 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL------ 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l------ 246 (771)
|++.......... ......+..|+|||++.+ ..++.++|+|||||++|+|++ |..||.....
T Consensus 165 g~~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~ 233 (283)
T 3gen_A 165 GLSRYVLDDEYTS-----SVGSKFPVRWSPPEVLMY------SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH 233 (283)
T ss_dssp TGGGGBCCHHHHS-----TTSTTSCGGGCCHHHHHH------CCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH
T ss_pred ccccccccccccc-----ccCCccCcccCCHHHhcc------CCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHH
Confidence 9998664321100 111122346999999876 356789999999999999998 8888754221
Q ss_pred -h------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 -R------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 -~------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
. ....++..+.+++.+||+.+|.+||++.+++++
T Consensus 234 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 274 (283)
T 3gen_A 234 IAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSN 274 (283)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HhcccCCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 1 113457789999999999999999999999876
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-33 Score=305.96 Aligned_cols=240 Identities=15% Similarity=0.163 Sum_probs=180.2
Q ss_pred CCCceecCCCCCCC-CceEEEEeEEC---CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSK---DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k---~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
...|++.+.||.|+ | +||+|+++ .++..|+||++.... .+...+.+.+|++++++|+||||+++++++...
T Consensus 44 ~~~~~~~~~lG~G~fg--~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-- 118 (373)
T 2qol_A 44 ATNISIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKS-- 118 (373)
T ss_dssp GGGCCCCEEEEECSSS--EEEEC-CBCTTSCBCCEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS--
T ss_pred HhhceeeeEEeeCCCe--EEEEEEEecCCCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeC--
Confidence 34799999999998 8 99999987 467789999997643 334567789999999999999999999999763
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEE
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~ 171 (771)
..+||||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+
T Consensus 119 ------~~~~lv~e~~~~~sL~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~-~~ivH~Dlkp~NIll~~~~~~kl~ 189 (373)
T 2qol_A 119 ------KPVMIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSD-MGYVHRDLAARNILINSNLVCKVS 189 (373)
T ss_dssp ------SSCEEEEECCTTCBHHHHHHTTTT--CSCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEECTTCCEEEC
T ss_pred ------CceEEEEeCCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHH-CCeeCCCCCcceEEEcCCCCEEEC
Confidence 3789999999 589999986532 12344466779999999999997 899999999999999999999999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh----
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL---- 246 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l---- 246 (771)
|||+++........ .........+..|+|||++.+ ..++.++|+|||||++|||++ |..||.....
T Consensus 190 Dfg~a~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~ 260 (373)
T 2qol_A 190 DFGLGRVLEDDPEA---AYTTRGGKIPIRWTSPEAIAY------RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260 (373)
T ss_dssp CC-------------------------CTTSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHH
T ss_pred cCccccccccCCcc---ceeccCCCcCCCccChhhhcc------CCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 99999876542211 011111122347999999876 357789999999999999997 8888743211
Q ss_pred ---------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 ---------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 ---------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....+|..+.+++.+||+.+|.+||++.++++.
T Consensus 261 ~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~ 303 (373)
T 2qol_A 261 KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303 (373)
T ss_dssp HHHHTTEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHcCCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHH
Confidence 1123567889999999999999999999998763
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-33 Score=298.88 Aligned_cols=236 Identities=14% Similarity=0.179 Sum_probs=186.4
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcE--EEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPV--SIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~V--aIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d~ 95 (771)
+|++.+.||.|+ | +||+|+++.+|..+ +||.+.... .....+.+.+|++++++| +||||++++++++..
T Consensus 26 ~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~---- 98 (327)
T 1fvr_A 26 DIKFQDVIGEGNFG--QVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR---- 98 (327)
T ss_dssp GCEEEEEEECGGGC--EEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEET----
T ss_pred HccceeeeecCCCc--eEEEEEEccCCcccceeeeeecccc-chHHHHHHHHHHHHHHhccCCCchhhhceeeeeC----
Confidence 699999999998 8 99999999888865 999987532 223456688999999999 899999999999874
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhC-------------CCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCE
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELG-------------LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSV 160 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~-------------~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI 160 (771)
..+||||||+ ++|.+++.... .........+..++.||+.||.|||+ .+++||||||+||
T Consensus 99 ----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~ivH~dlkp~NI 173 (327)
T 1fvr_A 99 ----GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ-KQFIHRDLAARNI 173 (327)
T ss_dssp ----TEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGE
T ss_pred ----CceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh-CCccCCCCccceE
Confidence 4899999999 48999998653 11223445567779999999999997 8999999999999
Q ss_pred EEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCC
Q 004157 161 VVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMR 239 (771)
Q Consensus 161 ~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~ 239 (771)
+++.+|.+||+|||++....... .......+..|+|||++.+ ..++.++|+|||||++|+|++ |..
T Consensus 174 l~~~~~~~kL~Dfg~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~ellt~g~~ 240 (327)
T 1fvr_A 174 LVGENYVAKIADFGLSRGQEVYV-------KKTMGRLPVRWMAIESLNY------SVYTTNSDVWSYGVLLWEIVSLGGT 240 (327)
T ss_dssp EECGGGCEEECCTTCEESSCEEC-------CC----CCTTTCCHHHHHH------CEECHHHHHHHHHHHHHHHHTTSCC
T ss_pred EEcCCCeEEEcccCcCccccccc-------cccCCCCCccccChhhhcc------ccCCchhcchHHHHHHHHHHcCCCC
Confidence 99999999999999987443211 0111223457999999865 345679999999999999998 888
Q ss_pred CCChhhh-------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 240 LSKTEEL-------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 240 p~~~~~l-------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
||..... .....+|..+.+++.+||..+|.+||++.+++++
T Consensus 241 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 294 (327)
T 1fvr_A 241 PYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 294 (327)
T ss_dssp TTTTCCHHHHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCCcHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 8754321 1123567889999999999999999999999875
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-33 Score=302.16 Aligned_cols=245 Identities=14% Similarity=0.156 Sum_probs=186.1
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeE-----ECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEE
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGT-----SKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTE 89 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~-----~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e 89 (771)
+...+|++.+.||.|+ | +||+|+ +..++..|+||++.... .......+.+|+.++++|+||||+++++++.
T Consensus 27 ~~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 103 (327)
T 2yfx_A 27 VPRKNITLIRGLGHGAFG--EVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFNHQNIVRCIGVSL 103 (327)
T ss_dssp CCGGGCEEEEECC--CSS--CEEEEEC--------CCEEEEEECCSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred CChhheEEEEEEcCCCCe--eEEEEEEcCCCCCCccceEEEEEecccc-chhhHHHHHHHHHHHhhCCCCCCCeEEEEEc
Confidence 3455799999999998 8 899999 55678899999997442 3344567889999999999999999999998
Q ss_pred ecccCcCCcccEEEEEecCC--cchHHHHHHhCCC----CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEc
Q 004157 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLE----GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT 163 (771)
Q Consensus 90 ~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~----~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~ 163 (771)
.. ...||||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++||||||+||+++
T Consensus 104 ~~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~-~~i~H~dlkp~NIli~ 174 (327)
T 2yfx_A 104 QS--------LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE-NHFIHRDIAARNCLLT 174 (327)
T ss_dssp SS--------SSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEES
T ss_pred CC--------CCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhh-CCeecCcCCHhHEEEe
Confidence 63 3679999999 4799999876421 123344566779999999999997 8999999999999999
Q ss_pred CCC---cEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCC
Q 004157 164 QTL---DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMR 239 (771)
Q Consensus 164 ~~G---~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~ 239 (771)
.+| .+||+|||++.......... ......++..|+|||++.+ ..++.++|+|||||++|+|++ |..
T Consensus 175 ~~~~~~~~kl~Dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~ellt~g~~ 244 (327)
T 2yfx_A 175 CPGPGRVAKIGDFGMARDIYRASYYR----KGGCAMLPVKWMPPEAFME------GIFTSKTDTWSFGVLLWEIFSLGYM 244 (327)
T ss_dssp CSSTTCCEEECCCHHHHHHHC----------CCGGGSCGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred cCCCcceEEECccccccccccccccc----cCCCcCCCcceeCHhHhcC------CCCCchhhHHHHHHHHHHHHcCCCC
Confidence 544 59999999997654321100 0111223447999999876 356789999999999999998 877
Q ss_pred CCChhhh-------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 240 LSKTEEL-------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 240 p~~~~~l-------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
||..... .....+|..+.+++.+||+.+|.+||++.+++++.+
T Consensus 245 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~ 300 (327)
T 2yfx_A 245 PYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300 (327)
T ss_dssp SSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 7754221 112357788999999999999999999999998743
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-32 Score=295.80 Aligned_cols=247 Identities=13% Similarity=0.117 Sum_probs=183.4
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECC---CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKD---DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~---~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
...|++++.||.|+ | +||+|+.+. ++..|+||++..........+.+.+|++.+++++||||+++++++...+.
T Consensus 33 ~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 110 (313)
T 3brb_A 33 RNLLILGKILGEGEFG--SVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS 110 (313)
T ss_dssp GGGEEEEEEEEC-CCC--CEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---
T ss_pred HHHeeeccceeecCCe--EEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc
Confidence 34699999999998 8 899998765 34589999998765555667788999999999999999999999986432
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCC---CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcE
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGL---EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDW 168 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~---~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~ 168 (771)
.+ ....|+||||+ ++|.+++..... ........+..++.||+.||.|||+ .+++||||||+||+++.+|.+
T Consensus 111 ~~---~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~ivH~dikp~NIli~~~~~~ 186 (313)
T 3brb_A 111 QG---IPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN-RNFLHRDLAARNCMLRDDMTV 186 (313)
T ss_dssp -------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHT-TTCCCCCCSGGGEEECTTSCE
T ss_pred cC---CcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCcceEEEcCCCcE
Confidence 10 12569999999 589999865432 1223445567779999999999996 899999999999999999999
Q ss_pred EEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh-
Q 004157 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL- 246 (771)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l- 246 (771)
||+|||++........... ......+..|+|||++.+ ..++.++|+|||||++|+|++ |..||.....
T Consensus 187 kl~Dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~ 256 (313)
T 3brb_A 187 CVADFGLSKKIYSGDYYRQ----GRIAKMPVKWIAIESLAD------RVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH 256 (313)
T ss_dssp EECSCSCC--------------------CCGGGSCHHHHHS------SCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG
T ss_pred EEeecCcceecccccccCc----ccccCCCccccCchhhcC------CCccchhhhHHHHHHHHHHHhcCCCCCccCCHH
Confidence 9999999987644211000 111123347999999876 356789999999999999999 7777753221
Q ss_pred ------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 ------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 ------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....+|..+.+++.+||..+|.+||++.+++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~ 302 (313)
T 3brb_A 257 EMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQ 302 (313)
T ss_dssp GHHHHHHTTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHcCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 1124577889999999999999999999999875
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-32 Score=298.04 Aligned_cols=241 Identities=18% Similarity=0.258 Sum_probs=190.2
Q ss_pred CCCCCCceecCCCCCCC-CceEEEEeEECCCC-CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCC------eeEEee
Q 004157 15 GVKDLPYNIGDPYPSAW-GSWSHFQGTSKDDG-SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPN------ILAFLH 86 (771)
Q Consensus 15 ~~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g-~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPn------Ilkv~d 86 (771)
.....+|++.+.||.|+ | +||+|+++.++ +.|+||++... ....+.+++|+++++.|+|++ |+.+++
T Consensus 15 ~~~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 89 (355)
T 2eu9_A 15 DWLQERYEIVGNLGEGTFG--KVVECLDHARGKSQVALKIIRNV---GKYREAARLEINVLKKIKEKDKENKFLCVLMSD 89 (355)
T ss_dssp CEETTTEEEEEEEEEETTE--EEEEEEETTTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEE
T ss_pred ceecccEEEEEEeeccCCe--EEEEEEecCCCceEEEEEEEccc---ccchhHHHHHHHHHHHHhhcCCCCceeEEEeee
Confidence 33466899999999998 8 99999998777 68999999742 234567888999999998766 899999
Q ss_pred eEEecccCcCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEE---
Q 004157 87 STEVENIDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV--- 162 (771)
Q Consensus 87 ~~e~e~~d~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v--- 162 (771)
+++.. ..+||||||+ ++|.+++....... .....+..++.||+.||.|||+ .+++||||||+||++
T Consensus 90 ~~~~~--------~~~~lv~e~~~~~l~~~l~~~~~~~-~~~~~~~~i~~qi~~~L~~lH~-~~ivH~Dlkp~NIll~~~ 159 (355)
T 2eu9_A 90 WFNFH--------GHMCIAFELLGKNTFEFLKENNFQP-YPLPHVRHMAYQLCHALRFLHE-NQLTHTDLKPENILFVNS 159 (355)
T ss_dssp EEEET--------TEEEEEEECCCCBHHHHHHHTTTCC-CCHHHHHHHHHHHHHHHHHHHT-TTEECCCCCGGGEEESCC
T ss_pred eeeeC--------CeEEEEEeccCCChHHHHHhccCCC-CCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEEecc
Confidence 98864 4899999999 57888877654222 2344566779999999999996 899999999999999
Q ss_pred ----------------cCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHH
Q 004157 163 ----------------TQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWG 226 (771)
Q Consensus 163 ----------------~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~S 226 (771)
+.++.+||+|||++....... ....++..|+|||++.+ ..++.++|+||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~---------~~~~gt~~y~aPE~~~~------~~~~~~~Di~s 224 (355)
T 2eu9_A 160 EFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHH---------TTIVATRHYRPPEVILE------LGWAQPCDVWS 224 (355)
T ss_dssp CEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSCC---------CSSCSCGGGCCHHHHTT------CCCCTHHHHHH
T ss_pred cccccccccccccccccCCCcEEEeecCccccccccc---------cCCcCCCcccCCeeeec------CCCCCccchHH
Confidence 668899999999997654321 11234558999999876 36778999999
Q ss_pred HHHHHHHHhhCCCCCChhhhh--------ccCCCC---------------------------------------------
Q 004157 227 LGCLIYELFSGMRLSKTEELR--------NTASIP--------------------------------------------- 253 (771)
Q Consensus 227 LG~li~el~~g~~p~~~~~l~--------~~~~IP--------------------------------------------- 253 (771)
|||++|||++|..||...... ....+|
T Consensus 225 lG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (355)
T 2eu9_A 225 IGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDS 304 (355)
T ss_dssp HHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCS
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccc
Confidence 999999999999988642210 011122
Q ss_pred ---cchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 254 ---KSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 254 ---~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
..+.+++.+||..||.+||++.++++| +||++
T Consensus 305 ~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h-p~f~~ 339 (355)
T 2eu9_A 305 LEHVQLFDLMRRMLEFDPAQRITLAEALLH-PFFAG 339 (355)
T ss_dssp HHHHHHHHHHHHHTCSSTTTSCCHHHHTTS-GGGGG
T ss_pred hhHHHHHHHHHHHhcCChhhCcCHHHHhcC-hhhcC
Confidence 256789999999999999999999998 56654
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-32 Score=288.00 Aligned_cols=241 Identities=12% Similarity=0.043 Sum_probs=190.7
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
..+|++++.||.|+ | +||+|+++.+|+.|+||++...... +.+.+|+++++.++|++++..+..+..+
T Consensus 8 ~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~~l~~l~~~~~i~~~~~~~~~----- 76 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFG--DIYLGTDIAAGEEVAIKLECVKTKH----PQLHIESKIYKMMQGGVGIPTIRWCGAE----- 76 (296)
T ss_dssp TTTEEEEEEEEEETTE--EEEEEEETTTTEEEEEEEEESCSSC----CHHHHHHHHHHHHTTSTTCCCEEEEEEE-----
T ss_pred ccEEEEEEEEccCCCe--EEEEEEEcCCCcEEEEEEecCCcch----hHHHHHHHHHHHhhcCCCCCccccccCC-----
Confidence 45799999999998 8 9999999999999999999865433 2477899999999999877777766543
Q ss_pred CcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEc---CCCcEEEEc
Q 004157 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT---QTLDWKLHA 172 (771)
Q Consensus 97 ~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~---~~G~~KL~d 172 (771)
....|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++ .++.+||+|
T Consensus 77 --~~~~~lv~e~~~~~L~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~dlkp~NIl~~~~~~~~~~kl~D 151 (296)
T 3uzp_A 77 --GDYNVMVMELLGPSLEDLFNFCSR--KFSLKTVLLLADQMISRIEYIHS-KNFIHRDVKPDNFLMGLGKKGNLVYIID 151 (296)
T ss_dssp --TTEEEEEEECCCCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHH-TTEECSCCCGGGEEECCGGGTTCEEECC
T ss_pred --CCceEEEEEecCCCHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHh-CCeeeCCCCHHHeEEecCCCCCeEEEee
Confidence 34889999999 579999975432 12344566779999999999997 8999999999999994 889999999
Q ss_pred cCcccccCCCCCCCCCCcc-ccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-----
Q 004157 173 FDVLSEFDGNNEAANGPML-QYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----- 246 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~-~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----- 246 (771)
||++............+.. .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||.....
T Consensus 152 fg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~ 225 (296)
T 3uzp_A 152 FGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLG------IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ 225 (296)
T ss_dssp CTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTT------CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSS
T ss_pred CCCcccccccccccccccccccccccccccCChhhhcC------CCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhh
Confidence 9999876553221111111 122344558999999876 3567899999999999999999998854210
Q ss_pred ----------h-----ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 ----------R-----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 ----------~-----~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
. ....+|..+.+++.+||+.+|.+||++.++++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~ 274 (296)
T 3uzp_A 226 KYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQL 274 (296)
T ss_dssp HHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHH
T ss_pred hhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHH
Confidence 0 115678999999999999999999999998753
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-33 Score=295.50 Aligned_cols=241 Identities=17% Similarity=0.169 Sum_probs=186.1
Q ss_pred CCceecCCCCCCC-CceEEEEeE----ECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGT----SKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~----~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
..|++.+.||.|+ | +||.|+ +..+++.|+||++..... ......+++|+++++.|+||||+++++++..+.
T Consensus 21 ~~~~~~~~lg~G~~g--~V~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFG--KVELCRYDPEGDNTGEQVAVKSLKPESG-GNHIADLKKEIEILRNLYHENIVKYKGICTEDG- 96 (302)
T ss_dssp GGEEEEEEEEECSSE--EEEEEEECTTSSSCSEEEEEEEEC------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---
T ss_pred hhhhhhhccCCCCce--EEEEEEEccccCccCeEEEEEEeccccc-chhHHHHHHHHHHHHhCCCCCeeeeeeEEecCC-
Confidence 3589999999998 8 999998 567899999999986432 234567889999999999999999999998754
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEE
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~ 171 (771)
...+|+||||+ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+
T Consensus 97 -----~~~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dikp~Nil~~~~~~~kl~ 168 (302)
T 4e5w_A 97 -----GNGIKLIMEFLPSGSLKEYLPKNKNK--INLKQQLKYAVQICKGMDYLGS-RQYVHRDLAARNVLVESEHQVKIG 168 (302)
T ss_dssp ------CCEEEEEECCTTCBHHHHHHHHTTT--CCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEEEETTEEEEC
T ss_pred -----CceEEEEEEeCCCCcHHHHHHhcccc--CCHHHHHHHHHHHHHHHHHhhc-CCcccCCCchheEEEcCCCCEEEC
Confidence 24789999999 4899999665321 2344466679999999999997 899999999999999999999999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh------
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE------ 245 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~------ 245 (771)
|||++.......... .......++..|+|||++.+. .++.++|+|||||++|+|++|..++....
T Consensus 169 Dfg~~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~ 239 (302)
T 4e5w_A 169 DFGLTKAIETDKEYY---TVKDDRDSPVFWYAPECLMQS------KFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKM 239 (302)
T ss_dssp CCTTCEECCTTCCEE---ECCCCTTCCGGGCCHHHHHHC------EEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHH
T ss_pred cccccccccCCCcce---eccCCCCCCccccCCeeecCC------CCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhc
Confidence 999998775432100 001112233469999998763 45578999999999999999987642110
Q ss_pred ----------------------hhccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 246 ----------------------LRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 246 ----------------------l~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
......+|..+.+++.+||+.+|.+||++.++++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 296 (302)
T 4e5w_A 240 IGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEG 296 (302)
T ss_dssp HCSCCGGGHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred cCCcccccCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHH
Confidence 00124567889999999999999999999998863
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-32 Score=292.70 Aligned_cols=247 Identities=17% Similarity=0.196 Sum_probs=183.6
Q ss_pred cCCCCCCCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeE
Q 004157 10 GGSGAGVKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHST 88 (771)
Q Consensus 10 ~~s~~~~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~ 88 (771)
+...+.+...+|++++.||.|+ | +||+|+++ ..|+||++..........+.+++|+++|++++||||++++++.
T Consensus 15 ~~~~~ei~~~~y~~~~~lG~G~~g--~Vy~~~~~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 89 (289)
T 3og7_A 15 AADDWEIPDGQITVGQRIGSGSFG--TVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89 (289)
T ss_dssp ---CCBCCTTSCEEEEEEEECSSE--EEEEEESS---SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred CCCCCccCccceeeeeEecCCCCe--EEEEEEEc---CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec
Confidence 3444567788999999999998 8 99999865 3599999987666666678899999999999999999999965
Q ss_pred EecccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC
Q 004157 89 EVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL 166 (771)
Q Consensus 89 e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G 166 (771)
.. ..+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|
T Consensus 90 ~~---------~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~L~~lH~-~~i~H~Dlkp~Nil~~~~~ 157 (289)
T 3og7_A 90 TA---------PQLAIVTQWCEGSSLYHHLHASET--KFEMKKLIDIARQTARGMDYLHA-KSIIHRDLKSNNIFLHEDN 157 (289)
T ss_dssp CS---------SSCEEEEECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEEETTT
T ss_pred cC---------CccEEEEEecCCCcHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHh-CCcccccCccceEEECCCC
Confidence 42 3689999999 579888854331 12334466679999999999997 8999999999999999999
Q ss_pred cEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-
Q 004157 167 DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE- 245 (771)
Q Consensus 167 ~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~- 245 (771)
.+||+|||++......... .......++..|+|||++...- ...++.++|+|||||++|+|++|..||....
T Consensus 158 ~~kl~Dfg~~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~---~~~~~~~~Di~slG~il~el~~g~~p~~~~~~ 230 (289)
T 3og7_A 158 TVKIGDFGLATEKSRWSGS----HQFEQLSGSILWMAPEVIRMQD---SNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 230 (289)
T ss_dssp EEEECCCC----------------------CCCTTCCHHHHC-------CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCC
T ss_pred CEEEccceecccccccccc----ccccccCCCccccCchhhcccC---CCCCCcccchHHHHHHHHHHHHCCCCccccch
Confidence 9999999999765432110 0011123455899999986210 1345678999999999999999998885421
Q ss_pred ---hh--------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 246 ---LR--------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 246 ---l~--------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
+. ....+|+.+.+++.+||+.+|.+||++.++++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~ 282 (289)
T 3og7_A 231 RDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAE 282 (289)
T ss_dssp HHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 10 113577889999999999999999999998864
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-33 Score=294.43 Aligned_cols=235 Identities=16% Similarity=0.183 Sum_probs=188.0
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEECCCCC-------cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeee
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGS-------PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHS 87 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~-------~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~ 87 (771)
+...+|++.+.||.|+ | +||+|+++.+++ .|+||++... .....+.+.+|++++++++||||++++++
T Consensus 5 i~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 80 (289)
T 4fvq_A 5 IRNEDLIFNESLGQGTFT--KIFKGVRREVGDYGQLHETEVLLKVLDKA--HRNYSESFFEAASMMSKLSHKHLVLNYGV 80 (289)
T ss_dssp CCGGGEEEEEEEEEETTE--EEEEEEEEEECGGGCEEEEEEEEEEECGG--GGGGHHHHHHHHHHHHTSCCTTBCCEEEE
T ss_pred echhHeeeeeeeccCCCc--eEEEEEEecccccccccchhhhhhhcccc--cHHHHHHHHHHHHHHHhCCCCCEeEEEEE
Confidence 3456799999999998 8 999999988774 6999999753 22345678899999999999999999999
Q ss_pred EEecccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCC
Q 004157 88 TEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT 165 (771)
Q Consensus 88 ~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~ 165 (771)
++.. ...||||||+ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.+
T Consensus 81 ~~~~--------~~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~i~~qi~~~L~~LH~-~~ivH~Dlkp~NIll~~~ 149 (289)
T 4fvq_A 81 CVCG--------DENILVQEFVKFGSLDTYLKKNKNC--INILWKLEVAKQLAAAMHFLEE-NTLIHGNVCAKNILLIRE 149 (289)
T ss_dssp ECCT--------TCCEEEEECCTTCBHHHHHHHTGGG--CCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEEEEC
T ss_pred EEeC--------CCCEEEEECCCCCCHHHHHHhCCCC--CCHHHHHHHHHHHHHHHHHHhh-CCeECCCcCcceEEEecC
Confidence 9864 3679999999 4899999875421 2334456679999999999997 899999999999999998
Q ss_pred Cc--------EEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhC
Q 004157 166 LD--------WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG 237 (771)
Q Consensus 166 G~--------~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g 237 (771)
+. +||+|||++...... .....+..|+|||++.+. ..++.++|+|||||++|+|++|
T Consensus 150 ~~~~~~~~~~~kl~Dfg~~~~~~~~----------~~~~~~~~y~aPE~~~~~-----~~~~~~~DiwslG~il~el~~g 214 (289)
T 4fvq_A 150 EDRKTGNPPFIKLSDPGISITVLPK----------DILQERIPWVPPECIENP-----KNLNLATDKWSFGTTLWEICSG 214 (289)
T ss_dssp CBGGGTBCCEEEECCCCSCTTTSCH----------HHHHHTTTTSCHHHHHCG-----GGCCHHHHHHHHHHHHHHHHTT
T ss_pred CcccccccceeeeccCcccccccCc----------cccCCcCcccCHHHhCCC-----CCCCchhHHHHHHHHHHHHHcC
Confidence 87 999999998655331 112234579999998752 2467899999999999999996
Q ss_pred C-CCCChhhh-----------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 238 M-RLSKTEEL-----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 238 ~-~p~~~~~l-----------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
. +++..... .....++..+.+++.+||+.+|.+||++.+++++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 269 (289)
T 4fvq_A 215 GDKPLSALDSQRKLQFYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRD 269 (289)
T ss_dssp TCCTTTTSCHHHHHHHHHTTCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred CCCCccccchHHHHHHhhccCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 5 44432111 1124567889999999999999999999999876
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-32 Score=302.43 Aligned_cols=239 Identities=17% Similarity=0.262 Sum_probs=189.1
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CC-----CeeEEeeeEEe
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HP-----NILAFLHSTEV 90 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HP-----nIlkv~d~~e~ 90 (771)
..+|++.+.||.|+ | +||+|+++.+|+.||||++... ......+.+|+++++.++ |+ +|+++++.+..
T Consensus 53 ~~~y~~~~~lG~G~~g--~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~ 127 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFG--QVVKAYDRVEQEWVAIKIIKNK---KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF 127 (382)
T ss_dssp TTTEEEEEEEEEETTE--EEEEEEETTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEE
T ss_pred eeeEEEEEEEeecCCE--EEEEEEEcCCCcEEEEEEEecc---HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeecc
Confidence 35799999999998 8 9999999999999999999743 234566788999988886 55 49999999987
Q ss_pred cccCcCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHc-CCCceecCCCCCCEEEc--CCC
Q 004157 91 ENIDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNN-DCKLVHGNVCLSSVVVT--QTL 166 (771)
Q Consensus 91 e~~d~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~-~~~ivH~dIkp~NI~v~--~~G 166 (771)
. ..+|||||++ ++|.+++....... .....+..++.||+.||.|||. +.+|+||||||+||+++ .++
T Consensus 128 ~--------~~~~lv~e~~~~~L~~~l~~~~~~~-~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~ 198 (382)
T 2vx3_A 128 R--------NHLCLVFEMLSYNLYDLLRNTNFRG-VSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRS 198 (382)
T ss_dssp T--------TEEEEEEECCCCBHHHHHHHTTTSC-CCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSC
T ss_pred C--------CceEEEEecCCCCHHHHHhhcCcCC-CCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCC
Confidence 4 4899999999 68999998764322 2344566779999999999995 47999999999999995 478
Q ss_pred cEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh
Q 004157 167 DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL 246 (771)
Q Consensus 167 ~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l 246 (771)
.+||+|||++....... ....++..|+|||++.+ ..++.++|+|||||++|||++|.+||.....
T Consensus 199 ~~kL~DFG~a~~~~~~~---------~~~~~t~~y~aPE~~~~------~~~~~~~DiwSlG~il~elltg~~pf~~~~~ 263 (382)
T 2vx3_A 199 AIKIVDFGSSCQLGQRI---------YQYIQSRFYRSPEVLLG------MPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263 (382)
T ss_dssp CEEECCCTTCEETTCCC---------CSSCSCGGGCCHHHHTT------CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred cEEEEeccCceeccccc---------ccccCCccccChHHHcC------CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 89999999998764321 12234557999999876 3577899999999999999999998863211
Q ss_pred h----c----------------------cCCCC-----------------------------------------------
Q 004157 247 R----N----------------------TASIP----------------------------------------------- 253 (771)
Q Consensus 247 ~----~----------------------~~~IP----------------------------------------------- 253 (771)
. . ...+|
T Consensus 264 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 343 (382)
T 2vx3_A 264 VDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTV 343 (382)
T ss_dssp HHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCH
T ss_pred HHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccc
Confidence 0 0 00011
Q ss_pred ---cchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 254 ---KSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 254 ---~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
..+.+++.+||..||.+|||+.++|+| +||+.
T Consensus 344 ~~~~~~~dli~~mL~~dP~~Rpta~e~L~h-p~f~~ 378 (382)
T 2vx3_A 344 ADYLKFKDLILRMLDYDPKTRIQPYYALQH-SFFKK 378 (382)
T ss_dssp HHHHHHHHHHHHHTCSCTTTSCCHHHHTTS-GGGCC
T ss_pred hhhHHHHHHHHHhcCCChhhCCCHHHHhcC-ccccc
Confidence 146799999999999999999999999 56654
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-32 Score=303.45 Aligned_cols=242 Identities=16% Similarity=0.224 Sum_probs=192.3
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCC-------CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeee
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDD-------GSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHS 87 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~-------g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~ 87 (771)
...+|++++.||.|+ | +||+|++..+ +..|+||++... ........+.+|+++++++ +||||++++++
T Consensus 67 ~~~~y~i~~~LG~G~~g--~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~ 143 (382)
T 3tt0_A 67 PRDRLVLGKPLGEGAFG--QVVLAEAIGLDKDKPNRVTKVAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGA 143 (382)
T ss_dssp CGGGEEEEEEEEECSSE--EEEEEEEETSSTTCTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred chhheEeeeEEecCCCe--EEEEEEEccccccccccceEEEEEeeccc-cCHHHHHHHHHHHHHHHHhcCCchhhhheee
Confidence 345799999999998 8 9999997543 357999999765 3334567788999999999 89999999999
Q ss_pred EEecccCcCCcccEEEEEecCC--cchHHHHHHhCCC-------------CCCcHHHHHHHHHHHHHHHHHHHcCCCcee
Q 004157 88 TEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLE-------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVH 152 (771)
Q Consensus 88 ~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~-------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH 152 (771)
+..+ ..+||||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++|
T Consensus 144 ~~~~--------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivH 214 (382)
T 3tt0_A 144 CTQD--------GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS-KKCIH 214 (382)
T ss_dssp ECSS--------SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHH-TTCCC
T ss_pred eccC--------CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh-CCEec
Confidence 9764 3689999999 4899999876421 123445567779999999999997 89999
Q ss_pred cCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHH
Q 004157 153 GNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIY 232 (771)
Q Consensus 153 ~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~ 232 (771)
|||||+||+++.+|.+||+|||++.......... .......+..|+|||++.+ ..++.++|+|||||++|
T Consensus 215 ~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~----~~~~~~~t~~y~aPE~~~~------~~~~~~~DiwslG~il~ 284 (382)
T 3tt0_A 215 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK----KTTNGRLPVKWMAPEALFD------RIYTHQSDVWSFGVLLW 284 (382)
T ss_dssp SCCCGGGEEECTTCCEEECSCSCCCCSSCCCTTC----CCTTCCCGGGGSCHHHHHS------CCCCHHHHHHHHHHHHH
T ss_pred CCCCcceEEEcCCCcEEEcccCcccccccccccc----cccCCCCCcceeCHHHhcC------CCCCchhHHHHHHHHHH
Confidence 9999999999999999999999998765422111 0111223347999999876 46778999999999999
Q ss_pred HHhh-CCCCCChhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 233 ELFS-GMRLSKTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 233 el~~-g~~p~~~~~l~-------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
+|++ |..||...... ....++..+..++.+||+.+|.+||++.+++++
T Consensus 285 ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 346 (382)
T 3tt0_A 285 EIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 346 (382)
T ss_dssp HHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 9999 88887543211 124577889999999999999999999999875
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-32 Score=298.16 Aligned_cols=248 Identities=10% Similarity=0.016 Sum_probs=187.6
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECC---CCCcEEEEEEeCCCCchh---------HHHHHHHHHHHHhcCCCCCeeE
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKD---DGSPVSIFSISGTNAQDG---------HLAAARNGVKRLRTVRHPNILA 83 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~---~g~~VaIK~~~~~~~~~~---------~~~~~~~ei~~Lk~LrHPnIlk 83 (771)
...+|++++.||.|+ | +||+|+++. ++..|+||++........ ....+.+|+..++.++||||++
T Consensus 35 ~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~ 112 (345)
T 2v62_A 35 EGNQWVLGKKIGSGGFG--LIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPL 112 (345)
T ss_dssp TSCEEEEEEEC--------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCC
T ss_pred cCceEEEEeeEeecCCe--EEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcce
Confidence 345799999999998 8 999999987 789999999986532210 1123557889999999999999
Q ss_pred EeeeEEecccCcCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEE
Q 004157 84 FLHSTEVENIDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV 162 (771)
Q Consensus 84 v~d~~e~e~~d~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v 162 (771)
+++++..+..+ ...+||||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||++
T Consensus 113 ~~~~~~~~~~~----~~~~~lv~e~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~aL~~LH~-~~ivH~Dlkp~NIll 184 (345)
T 2v62_A 113 FYGSGLTEFKG----RSYRFMVMERLGIDLQKISGQNGT---FKKSTVLQLGIRMLDVLEYIHE-NEYVHGDIKAANLLL 184 (345)
T ss_dssp EEEEEEEESSS----CEEEEEEEECEEEEHHHHCBGGGB---CCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEE
T ss_pred eecccccccCC----CcEEEEEEeccCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeeCCCcCHHHEEE
Confidence 99999874322 35899999999 579998876542 2344567779999999999997 899999999999999
Q ss_pred cCCC--cEEEEccCcccccCCCCCCCCC-CccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCC
Q 004157 163 TQTL--DWKLHAFDVLSEFDGNNEAANG-PMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMR 239 (771)
Q Consensus 163 ~~~G--~~KL~dFgla~~~~~~~~~~~~-~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~ 239 (771)
+.++ .+||+|||++..+......... ........++..|+|||++.+ ..++.++|+|||||++|||++|..
T Consensus 185 ~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~il~ell~g~~ 258 (345)
T 2v62_A 185 GYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKG------VALSRRSDVEILGYCMLRWLCGKL 258 (345)
T ss_dssp ESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHT------CCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred ccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcC------CCCCchhhHHHHHHHHHHHHhCCC
Confidence 9887 9999999999876532211100 011122344569999999876 356789999999999999999999
Q ss_pred CCChhh-----h--------hcc----------CCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 240 LSKTEE-----L--------RNT----------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 240 p~~~~~-----l--------~~~----------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
||.... . ..+ ..+|..+.+++.+||..+|.+||++.++++.
T Consensus 259 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~ 322 (345)
T 2v62_A 259 PWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKI 322 (345)
T ss_dssp TTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHH
T ss_pred CccccccccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHH
Confidence 984311 0 000 1688899999999999999999999998763
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-32 Score=295.32 Aligned_cols=242 Identities=15% Similarity=0.180 Sum_probs=183.0
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEECCCCC----cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEe
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGS----PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~----~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~ 90 (771)
+....|++.+.||.|+ | +||+|+++.++. .|+||++.... .......+.+|+++++.|+||||++++++++.
T Consensus 41 i~~~~~~~~~~lG~G~~g--~Vy~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 117 (333)
T 1mqb_A 41 IHPSCVTRQKVIGAGEFG--EVYKGMLKTSSGKKEVPVAIKTLKAGY-TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISK 117 (333)
T ss_dssp CCTTTEEEEEEEEECSSS--EEEEEEEEC---CCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred CChHHhhcccEEecCCCe--EEEEEEEecCCCCccccEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEec
Confidence 3456799999999998 8 999999876543 59999997543 33445678899999999999999999999976
Q ss_pred cccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcE
Q 004157 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDW 168 (771)
Q Consensus 91 e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~ 168 (771)
. ..+||||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+
T Consensus 118 ~--------~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~-~~ivH~Dikp~NIl~~~~~~~ 186 (333)
T 1mqb_A 118 Y--------KPMMIITEYMENGALDKFLREKDG--EFSVLQLVGMLRGIAAGMKYLAN-MNYVHRDLAARNILVNSNLVC 186 (333)
T ss_dssp S--------SSEEEEEECCTTEEHHHHHHHTTT--CSCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEECTTCCE
T ss_pred C--------CCcEEEEeCCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHh-CCeeCCCCChheEEECCCCcE
Confidence 3 3789999999 479999976432 12344566779999999999997 899999999999999999999
Q ss_pred EEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh-
Q 004157 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL- 246 (771)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l- 246 (771)
||+|||++......... .........+..|+|||++.+ ..++.++|+|||||++|+|++ |..||.....
T Consensus 187 kl~Dfg~~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~ 257 (333)
T 1mqb_A 187 KVSDFGLSRVLEDDPEA---TYTTSGGKIPIRWTAPEAISY------RKFTSASDVWSFGIVMWEVMTYGERPYWELSNH 257 (333)
T ss_dssp EECCCCC--------------------CCCGGGSCHHHHHS------CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH
T ss_pred EECCCCcchhhcccccc---ccccCCCCccccccCchhccc------CCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH
Confidence 99999999876542111 011111122347999999875 356789999999999999998 8888743211
Q ss_pred ------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 ------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 ------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....+|..+.+++.+||+.+|.+||++.+++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 303 (333)
T 1mqb_A 258 EVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSI 303 (333)
T ss_dssp HHHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred HHHHHHHCCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 1123567789999999999999999999998864
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-33 Score=309.22 Aligned_cols=238 Identities=19% Similarity=0.216 Sum_probs=188.3
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
..|++++.||.|+ | +||+|+++.+++.|+||++.... .......+.+|+++|++++||||+++++++..+
T Consensus 114 ~~~~~~~~lG~G~~g--~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~------ 184 (377)
T 3cbl_A 114 EDLVLGEQIGRGNFG--EVFSGRLRADNTLVAVKSCRETL-PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK------ 184 (377)
T ss_dssp GGEEEEEEEEEETTE--EEEEEEETTTCCEEEEEECCTTS-CHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSS------
T ss_pred HHeEEeeEeccCCCC--eEEEEEEecCCeEEEEEEccccC-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecC------
Confidence 4688999999998 8 99999999999999999987542 333455678899999999999999999999763
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+||||||| ++|.++++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 185 --~~~~lv~e~~~~g~L~~~l~~~~~~--~~~~~~~~~~~qi~~~l~~LH~-~~ivHrDlkp~Nil~~~~~~~kl~DfG~ 259 (377)
T 3cbl_A 185 --QPIYIVMELVQGGDFLTFLRTEGAR--LRVKTLLQMVGDAAAGMEYLES-KCCIHRDLAARNCLVTEKNVLKISDFGM 259 (377)
T ss_dssp --SSCEEEEECCTTCBHHHHHHHHGGG--CCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEECTTCCEEECCGGG
T ss_pred --CCcEEEEEcCCCCCHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHH-CCcCCcccCHHHEEEcCCCcEEECcCCC
Confidence 3689999999 5899999865321 2234466679999999999997 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh--------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL-------- 246 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l-------- 246 (771)
+........... ......+..|+|||++.+. .++.++|+|||||++|||++ |..|+.....
T Consensus 260 s~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~------~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~ 329 (377)
T 3cbl_A 260 SREEADGVYAAS----GGLRQVPVKWTAPEALNYG------RYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVE 329 (377)
T ss_dssp CEECTTSEEECC----SSCCEEEGGGSCHHHHHHC------EEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHH
T ss_pred ceecCCCceeec----CCCCCCCcCcCCHhHhccC------CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 986543211000 0001123469999998753 45678999999999999998 8888754211
Q ss_pred -----hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 -----RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 -----~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....+|..+.+++.+||+.+|.+||++.++++.
T Consensus 330 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~ 368 (377)
T 3cbl_A 330 KGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQE 368 (377)
T ss_dssp TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred cCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 1123467789999999999999999999998753
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=99.98 E-value=5.1e-33 Score=299.46 Aligned_cols=241 Identities=13% Similarity=0.154 Sum_probs=189.7
Q ss_pred CCCceecCCCCCCC-CceEEEEeEEC-----CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEec
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSK-----DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k-----~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e 91 (771)
..+|++.+.||.|+ | +||+|+++ .+++.|+||++.... .......+.+|+++++.++||||+++++++...
T Consensus 24 ~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 100 (322)
T 1p4o_A 24 REKITMSRELGQGSFG--MVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 100 (322)
T ss_dssp GGGEEEEEEEEECSSS--EEEEEEEEEEETTEEEEEEEEEECCTTS-CHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSS
T ss_pred hhheeeeeEeccCCce--EEEeeeecCccCCCCceEEEEEeccccc-CHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccC
Confidence 44799999999998 8 99999877 457899999997543 233456788999999999999999999999763
Q ss_pred ccCcCCcccEEEEEecCC--cchHHHHHHhCC-------CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEE
Q 004157 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGL-------EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV 162 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~-------~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v 162 (771)
..+|+||||+ ++|.+++..... ........+..++.||+.||.|||+ .+++||||||+||++
T Consensus 101 --------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~i~H~dikp~NIli 171 (322)
T 1p4o_A 101 --------QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA-NKFVHRDLAARNCMV 171 (322)
T ss_dssp --------SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH-TTCBCSCCSGGGEEE
T ss_pred --------CccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHH-CCCccCCCccceEEE
Confidence 3789999999 489998876421 1222344566779999999999997 899999999999999
Q ss_pred cCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCC
Q 004157 163 TQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLS 241 (771)
Q Consensus 163 ~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~ 241 (771)
+.+|.+||+|||++......... ........+..|+|||++.+ ..++.++|+|||||++|+|++ |..||
T Consensus 172 ~~~~~~kl~Dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~el~~~g~~p~ 241 (322)
T 1p4o_A 172 AEDFTVKIGDFGMTRDIYETDYY----RKGGKGLLPVRWMSPESLKD------GVFTTYSDVWSFGVVLWEIATLAEQPY 241 (322)
T ss_dssp CTTCCEEECCTTCCCGGGGGGCE----EGGGSSEECGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHHTSCCTT
T ss_pred cCCCeEEECcCcccccccccccc----ccccCCCCCCCccChhhhcc------CCCCchhhHHHHHHHHHHHHhcCCCcc
Confidence 99999999999998765432100 00111223447999999876 356789999999999999999 77777
Q ss_pred Chhhh-------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 242 KTEEL-------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 242 ~~~~l-------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
..... .....+|..+.+++.+||..+|.+||++.+++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~ 293 (322)
T 1p4o_A 242 QGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 293 (322)
T ss_dssp TTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 54221 1124577889999999999999999999999876
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.2e-32 Score=287.98 Aligned_cols=239 Identities=14% Similarity=0.142 Sum_probs=191.0
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
+.-.+|++.+.||.|+ | +||+|+++ |+.|+||++..........+.+.+|++.+++++||||+++++++....
T Consensus 7 i~~~~y~~~~~lg~G~~g--~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 80 (271)
T 3kmu_A 7 IDFKQLNFLTKLNENHSG--ELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPP-- 80 (271)
T ss_dssp CCGGGCEEEEEEEEETTE--EEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTT--
T ss_pred CCHHHhHHHHHhcCCCcc--eEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCC--
Confidence 3445799999999998 8 99999985 889999999876655566778999999999999999999999997653
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCC--ceecCCCCCCEEEcCCCcEEE
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCK--LVHGNVCLSSVVVTQTLDWKL 170 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~--ivH~dIkp~NI~v~~~G~~KL 170 (771)
...+|+||||+ ++|.+++...... ......+..++.||+.||.|||+ .+ ++||||||+||+++.+|.+||
T Consensus 81 ----~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~-~~~~i~H~dikp~Nil~~~~~~~~l 154 (271)
T 3kmu_A 81 ----APHPTLITHWMPYGSLYNVLHEGTNF-VVDQSQAVKFALDMARGMAFLHT-LEPLIPRHALNSRSVMIDEDMTARI 154 (271)
T ss_dssp ----SSSCEEEEECCTTCBHHHHHHSCSSC-CCCHHHHHHHHHHHHHHHHHHTT-SSSCCTTCCCSGGGEEECTTSCEEE
T ss_pred ----CCCeEeeecccCCCcHHHHHhhcccC-CCCHHHHHHHHHHHHHHHHHHhc-CCCceecCCCccceEEEcCCcceeE
Confidence 24789999999 4899999875421 12344566779999999999996 88 999999999999999999999
Q ss_pred EccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL---- 246 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l---- 246 (771)
+|||+....... ...++..|+|||++.+.-. ..++.++|+|||||++|+|++|..||.....
T Consensus 155 ~~~~~~~~~~~~-----------~~~~t~~y~aPE~~~~~~~---~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~ 220 (271)
T 3kmu_A 155 SMADVKFSFQSP-----------GRMYAPAWVAPEALQKKPE---DTNRRSADMWSFAVLLWELVTREVPFADLSNMEIG 220 (271)
T ss_dssp EGGGSCCTTSCT-----------TCBSCGGGSCHHHHHSCGG---GSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHH
T ss_pred Eeccceeeeccc-----------CccCCccccChhhhccCCC---CCCCchhhHHHHHHHHHHHHhCCCCccccChHHHH
Confidence 999987654321 1133458999999875311 1222379999999999999999998854221
Q ss_pred ----------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 ----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 ----------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....+|..+.+++.+||+.+|.+||++.++++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 264 (271)
T 3kmu_A 221 MKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPI 264 (271)
T ss_dssp HHHHHSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 1123577889999999999999999999998753
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.98 E-value=6.7e-33 Score=301.56 Aligned_cols=241 Identities=17% Similarity=0.156 Sum_probs=187.0
Q ss_pred CCCceecCCCCCCC-CceEEEEeEEC-----CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEe
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSK-----DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEV 90 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k-----~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~ 90 (771)
...|++++.||.|+ | +||+|++. .++..|+||++.... .....+.+.+|+++|++| +||||+++++++..
T Consensus 44 ~~~y~~~~~lG~G~~g--~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 120 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFG--KVMNATAYGISKTGVSIQVAVKMLKEKA-DSSEREALMSELKMMTQLGSHENIVNLLGACTL 120 (344)
T ss_dssp GGGEEEEEEEEECSSE--EEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred HHHceeeeeecCCCCc--eeEEeeeeccccCCcceEEEEEeccccc-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee
Confidence 34688999999998 8 99999973 356689999997543 223456788999999999 89999999999986
Q ss_pred cccCcCCcccEEEEEecCC--cchHHHHHHhCCC--------------------CCCcHHHHHHHHHHHHHHHHHHHcCC
Q 004157 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLE--------------------GSQRDEYYAWGLNQIAKAVSFLNNDC 148 (771)
Q Consensus 91 e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~--------------------~~~~~~~i~~gl~QI~~aL~fLH~~~ 148 (771)
. ..+||||||+ ++|.+++...... .......+..++.||+.||.|||+ .
T Consensus 121 ~--------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~ 191 (344)
T 1rjb_A 121 S--------GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF-K 191 (344)
T ss_dssp S--------SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH-T
T ss_pred C--------CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHh-C
Confidence 3 3789999999 4899999875421 112334466779999999999997 8
Q ss_pred CceecCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHH
Q 004157 149 KLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLG 228 (771)
Q Consensus 149 ~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG 228 (771)
+++||||||+||+++.+|.+||+|||++........ ........++..|+|||++.+ ..++.++|+||||
T Consensus 192 ~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~----~~~~~~~~~t~~y~aPE~~~~------~~~~~~~Di~slG 261 (344)
T 1rjb_A 192 SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN----YVVRGNARLPVKWMAPESLFE------GIYTIKSDVWSYG 261 (344)
T ss_dssp TEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTT----SEEETTEEECGGGCCHHHHHH------CCCCHHHHHHHHH
T ss_pred CcccCCCChhhEEEcCCCcEEeCCCccCcccccCcc----ceeccCccCccCccCHHHhcc------CCCChhHhHHHHH
Confidence 999999999999999999999999999986643211 111111223347999999876 3567899999999
Q ss_pred HHHHHHhh-CCCCCChhhh--------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 229 CLIYELFS-GMRLSKTEEL--------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 229 ~li~el~~-g~~p~~~~~l--------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
|++|+|++ |..||..... .....+|..+.+++.+||..+|.+||++.+++++
T Consensus 262 ~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~ 328 (344)
T 1rjb_A 262 ILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF 328 (344)
T ss_dssp HHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHcCCCCCcccCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 99999998 8888754221 0123467889999999999999999999999875
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=3.1e-32 Score=292.65 Aligned_cols=252 Identities=15% Similarity=0.139 Sum_probs=192.2
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
...+|++.+.||.|+ | +||+++++.+|+.|+||++... .....+.+.+|+++++.++||||+++++++..+...
T Consensus 27 ~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~- 101 (317)
T 2buj_A 27 DNKHYLFIQKLGEGGFS--YVDLVEGLHDGHFYALKRILCH--EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGA- 101 (317)
T ss_dssp TTEEEEEEEEEEC--CE--EEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETT-
T ss_pred CCeEEEEEEEecCCCCe--EEEEEEecCCCcEEEEEEEecC--CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCC-
Confidence 345799999999998 8 9999999999999999998753 234567788999999999999999999999754322
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCC-CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
...+|+||||+ ++|.+++..... ........+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|
T Consensus 102 ---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~-~~ivH~dlkp~NIl~~~~~~~kl~d 177 (317)
T 2buj_A 102 ---KHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA-KGYAHRDLKPTNILLGDEGQPVLMD 177 (317)
T ss_dssp ---EEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEECTTSCEEECC
T ss_pred ---CceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEEcCCCCEEEEe
Confidence 45899999999 489998876421 1223445567779999999999997 8999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCC--ccc-cccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----
Q 004157 173 FDVLSEFDGNNEAANGP--MLQ-YAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE---- 245 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~--~~~-~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~---- 245 (771)
||++............. ... ....++..|+|||++.+... ..++.++|+|||||++|+|++|..||....
T Consensus 178 fg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~ 254 (317)
T 2buj_A 178 LGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSH---CVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD 254 (317)
T ss_dssp CSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSE---EEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTS
T ss_pred cCcchhcccccccccccccccccccccCCcccCCHhHhccCCC---cCCCchhhHHHHHHHHHHHHhCCCChhhhhcccc
Confidence 99987654211000000 000 11123458999999864210 124679999999999999999999885311
Q ss_pred -----------hhccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 246 -----------LRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 246 -----------l~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
......+|..+.+++.+||+.+|.+||++.+++++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 300 (317)
T 2buj_A 255 SVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ 300 (317)
T ss_dssp CHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hhhHHhhccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence 01123567789999999999999999999999875
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=99.98 E-value=1.1e-32 Score=295.53 Aligned_cols=243 Identities=16% Similarity=0.202 Sum_probs=191.9
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEE-----CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEE
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTS-----KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTE 89 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~-----k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e 89 (771)
...+|++++.||.|+ | +||+|++ +.+++.|+||++.... .......+.+|+++++++ +||||+++++++.
T Consensus 25 ~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 101 (316)
T 2xir_A 25 PRDRLKLGKPLGRGAFG--QVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACT 101 (316)
T ss_dssp CGGGEEEEEEEEECSSE--EEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred chhheeeeeEEcCCCce--eEEEEEEecCCccccceEEEEEecccCC-CcHHHHHHHHHHHHHHhcccCCCeeeEEEEEe
Confidence 345799999999998 8 9999984 4567899999997653 334456788999999999 6999999999987
Q ss_pred ecccCcCCcccEEEEEecCC--cchHHHHHHhCCC-------------CCCcHHHHHHHHHHHHHHHHHHHcCCCceecC
Q 004157 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLE-------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGN 154 (771)
Q Consensus 90 ~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~-------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~d 154 (771)
.++ ..+|+||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++|||
T Consensus 102 ~~~-------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~i~H~d 173 (316)
T 2xir_A 102 KPG-------GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS-RKCIHRD 173 (316)
T ss_dssp CTT-------SCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHH-TTCCCSC
T ss_pred cCC-------CceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHh-CCccccc
Confidence 542 3689999999 4899999875421 113345567779999999999997 8999999
Q ss_pred CCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHH
Q 004157 155 VCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYEL 234 (771)
Q Consensus 155 Ikp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el 234 (771)
|||+||+++.+|.+||+|||++........ ........++..|+|||++.+ ..++.++|+|||||++|+|
T Consensus 174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~----~~~~~~~~~t~~y~aPE~~~~------~~~~~~~Di~slG~il~~l 243 (316)
T 2xir_A 174 LAARNILLSEKNVVKICDFGLARDIYKDPD----YVRKGDARLPLKWMAPETIFD------RVYTIQSDVWSFGVLLWEI 243 (316)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTT----SEEETTEEECGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHH
T ss_pred CccceEEECCCCCEEECCCccccccccCcc----ceeccCCCcceeecCchhhcc------ccccchhHHHHHHHHHHHH
Confidence 999999999999999999999987654211 111112233447999999876 3577899999999999999
Q ss_pred hh-CCCCCChhhh--------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 235 FS-GMRLSKTEEL--------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 235 ~~-g~~p~~~~~l--------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
++ |..||..... .....++..+.+++.+||+.+|.+||++.+++++
T Consensus 244 ~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 304 (316)
T 2xir_A 244 FSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304 (316)
T ss_dssp HTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HhCCCCCCcccchhHHHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 98 8888754211 1123467789999999999999999999999876
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=99.98 E-value=1.4e-32 Score=298.28 Aligned_cols=242 Identities=16% Similarity=0.240 Sum_probs=189.6
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEEC-------CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeee
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSK-------DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHS 87 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k-------~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~ 87 (771)
...+|++++.||.|+ | +||+|++. .++..|+||++.... .......+.+|+++++++ +||||++++++
T Consensus 33 ~~~~y~~~~~lG~G~~g--~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 109 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFG--QVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGA 109 (334)
T ss_dssp CGGGEEEEEEEEECSSC--EEEEEEETTCSTTCC---CEEEEEECCTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred CHhHeEEeeEEeecCce--eEEEeEeccccccccccceEEEEeeeccCC-cHHHHHHHHHHHHHHHHhhcCCCEeeEEEE
Confidence 345799999999998 8 99999976 457789999997543 334567788999999999 89999999999
Q ss_pred EEecccCcCCcccEEEEEecCC--cchHHHHHHhCCC-------------CCCcHHHHHHHHHHHHHHHHHHHcCCCcee
Q 004157 88 TEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLE-------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVH 152 (771)
Q Consensus 88 ~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~-------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH 152 (771)
+... ..+||||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++|
T Consensus 110 ~~~~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~ivH 180 (334)
T 2pvf_A 110 CTQD--------GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS-QKCIH 180 (334)
T ss_dssp ECSS--------SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHH-TTEEC
T ss_pred EccC--------CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh-CCeeC
Confidence 9763 3789999999 4899999875421 112344466779999999999997 89999
Q ss_pred cCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHH
Q 004157 153 GNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIY 232 (771)
Q Consensus 153 ~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~ 232 (771)
|||||+||+++.+|.+||+|||++.......... .......+..|+|||++.+ ..++.++|+|||||++|
T Consensus 181 ~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~ 250 (334)
T 2pvf_A 181 RDLAARNVLVTENNVMKIADFGLARDINNIDYYK----KTTNGRLPVKWMAPEALFD------RVYTHQSDVWSFGVLMW 250 (334)
T ss_dssp SCCSGGGEEECTTCCEEECCCTTCEECTTTSSEE----CCSCCCCCGGGCCHHHHHH------CEECHHHHHHHHHHHHH
T ss_pred CCCccceEEEcCCCCEEEcccccccccccccccc----ccCCCCcccceeChHHhcC------CCcChHHHHHHHHHHHH
Confidence 9999999999999999999999998765422100 0111122347999999865 34667899999999999
Q ss_pred HHhh-CCCCCChhhh-------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 233 ELFS-GMRLSKTEEL-------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 233 el~~-g~~p~~~~~l-------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
+|++ |..||..... .....++..+..++.+||+.+|.+||++.+++++
T Consensus 251 ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 312 (334)
T 2pvf_A 251 EIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312 (334)
T ss_dssp HHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHhCCCCCcCcCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 9999 8888754221 1124567889999999999999999999999875
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.8e-32 Score=298.31 Aligned_cols=239 Identities=18% Similarity=0.225 Sum_probs=170.1
Q ss_pred CCceecC-CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 19 LPYNIGD-PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 19 ~~Y~i~e-~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
.+|.+.+ .||.|+ | +||+|+++.+|+.|+||++... . ...+.....++.++||||++++++++....+
T Consensus 28 ~~y~i~~~~lG~G~~g--~V~~~~~~~~~~~vavK~~~~~---~---~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~-- 97 (336)
T 3fhr_A 28 DDYQLSKQVLGLGVNG--KVLECFHRRTGQKCALKLLYDS---P---KARQEVDHHWQASGGPHIVCILDVYENMHHG-- 97 (336)
T ss_dssp GTEEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEESS---H---HHHHHHHHHHHHTTSTTBCCEEEEEEEEETT--
T ss_pred ceeEecceeeeeCCCe--EEEEEEECCCCCEEEEEEecCc---H---HHHHHHHHHHHhcCCCChHHHHHHHhhccCC--
Confidence 3688855 589998 8 9999999999999999999753 1 1222233446778999999999999864322
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC---CCcEEEE
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ---TLDWKLH 171 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~---~G~~KL~ 171 (771)
+..+||||||| ++|.+++...... ......+..++.||+.||.|||+ .+++||||||+||+++. ++.+||+
T Consensus 98 --~~~~~lv~e~~~gg~L~~~l~~~~~~-~l~~~~~~~i~~ql~~~l~~LH~-~~ivH~dlkp~NIll~~~~~~~~~kl~ 173 (336)
T 3fhr_A 98 --KRCLLIIMECMEGGELFSRIQERGDQ-AFTEREAAEIMRDIGTAIQFLHS-HNIAHRDVKPENLLYTSKEKDAVLKLT 173 (336)
T ss_dssp --EEEEEEEEECCTTEEHHHHHHTC-CC-CCBHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEESCSSTTCCEEEC
T ss_pred --CceEEEEEeccCCCCHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEEecCCCceEEEe
Confidence 34799999999 4899999875421 23345567779999999999997 89999999999999986 4559999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc---
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN--- 248 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~--- 248 (771)
|||++....... ......+..|+|||++.+ ..++.++|+|||||++|+|++|..||.......
T Consensus 174 Dfg~~~~~~~~~--------~~~~~~t~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~ 239 (336)
T 3fhr_A 174 DFGFAKETTQNA--------LQTPCYTPYYVAPEVLGP------EKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP 239 (336)
T ss_dssp CCTTCEEC------------------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------
T ss_pred ccccceeccccc--------cccCCCCcCccChhhhCC------CCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh
Confidence 999998664321 111233558999999865 245578999999999999999999885432110
Q ss_pred -----------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 249 -----------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 249 -----------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
...++..+.+++.+||..+|.+||++.++++| +||++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h-p~~~~ 293 (336)
T 3fhr_A 240 GMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH-PWINQ 293 (336)
T ss_dssp -----------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS-HHHHT
T ss_pred hHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC-ccccc
Confidence 13578889999999999999999999999998 55543
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.1e-32 Score=297.18 Aligned_cols=241 Identities=16% Similarity=0.163 Sum_probs=188.6
Q ss_pred CCCCc-eecCCCCCCC-CceEEEEe----EECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEe
Q 004157 17 KDLPY-NIGDPYPSAW-GSWSHFQG----TSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (771)
Q Consensus 17 ~~~~Y-~i~e~ig~G~-g~wtVy~g----~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~ 90 (771)
...+| ++.+.||.|+ | +||.+ .++.+|+.|+||++.... .......+.+|+++|++|+||||++++++++.
T Consensus 28 ~~~r~~~~~~~lG~G~~g--~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 104 (318)
T 3lxp_A 28 FHKRYLKKIRDLGEGHFG--KVSLYCYDPTNDGTGEMVAVKALKADA-GPQHRSGWKQEIDILRTLYHEHIIKYKGCCED 104 (318)
T ss_dssp CCGGGEEEEEEEEECSSE--EEEEEEECSCC--CCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE
T ss_pred ecHHHHhhhheecCCCCe--EEEEEEEccCCCCCCcEEEEEEecccc-ChHHHHHHHHHHHHHHhCCCcchhhEEEEEec
Confidence 34456 9999999998 7 88665 455678999999998653 33456778999999999999999999999987
Q ss_pred cccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcE
Q 004157 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDW 168 (771)
Q Consensus 91 e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~ 168 (771)
.+ ...+||||||+ ++|.+++....+ ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+
T Consensus 105 ~~------~~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~i~~~l~~~l~~LH~-~~ivH~Dikp~Nil~~~~~~~ 173 (318)
T 3lxp_A 105 AG------AASLQLVMEYVPLGSLRDYLPRHSI----GLAQLLLFAQQICEGMAYLHA-QHYIHRDLAARNVLLDNDRLV 173 (318)
T ss_dssp TT------TTEEEEEECCCTTCBHHHHGGGSCC----CHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEECTTCCE
T ss_pred CC------CceEEEEEecccCCcHHHHHhhCCC----CHHHHHHHHHHHHHHHHHHHh-CCccCCCCchheEEEcCCCCE
Confidence 54 34899999999 489999977653 334466679999999999997 899999999999999999999
Q ss_pred EEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh--
Q 004157 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-- 246 (771)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-- 246 (771)
||+|||++.......... ........+..|+|||++.+. .++.++|+|||||++|+|++|..|+.....
T Consensus 174 kl~Dfg~a~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~ 244 (318)
T 3lxp_A 174 KIGDFGLAKAVPEGHEYY---RVREDGDSPVFWYAPECLKEY------KFYYASDVWSFGVTLYELLTHCDSSQSPPTKF 244 (318)
T ss_dssp EECCGGGCEECCTTCSEE---EC---CCCCGGGCCHHHHHHC------EEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHH
T ss_pred EECCcccccccccccccc---ccccCCCCCceeeChHHhcCC------CCCcHHHHHHHHHHHHHHHhCCCcccccchhh
Confidence 999999998775432100 001112233469999998763 455789999999999999999887753211
Q ss_pred --------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 --------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 --------------------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....+|..+.+++.+||..+|.+||++.++++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 304 (318)
T 3lxp_A 245 LELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPI 304 (318)
T ss_dssp HHHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hhhhcccccchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 0123577889999999999999999999998753
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2.3e-32 Score=288.81 Aligned_cols=240 Identities=15% Similarity=0.162 Sum_probs=186.7
Q ss_pred CCCCCCceecCCCCCCC-CceEEEEeEECCC---CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEe
Q 004157 15 GVKDLPYNIGDPYPSAW-GSWSHFQGTSKDD---GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (771)
Q Consensus 15 ~~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~---g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~ 90 (771)
++...+|++.+.||.|+ | +||+|++..+ +..|+||++.... .....+.+.+|+++++.|+||||++++++++.
T Consensus 8 ~~~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 84 (281)
T 3cc6_A 8 GIAREDVVLNRILGEGFFG--EVYEGVYTNHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE 84 (281)
T ss_dssp SCCGGGEEEEEEEEECSSS--EEEEEEEECTTCCEEEEEEEECCTTS-CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS
T ss_pred eecccceEEEEEEEecCCe--eEEEeEEcCCCCCcceEEEEeccccc-CchHHHHHHHHHHHHHhCCCCCcceEEEEEcC
Confidence 34456799999999998 8 9999987643 3459999987643 33456778999999999999999999999864
Q ss_pred cccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcE
Q 004157 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDW 168 (771)
Q Consensus 91 e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~ 168 (771)
+ ..|+||||+ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+
T Consensus 85 ~---------~~~~v~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~Nil~~~~~~~ 152 (281)
T 3cc6_A 85 E---------PTWIIMELYPYGELGHYLERNKNS--LKVLTLVLYSLQICKAMAYLES-INCVHRDIAVRNILVASPECV 152 (281)
T ss_dssp S---------SCEEEEECCTTCBHHHHHHHHTTT--CCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCSGGGEEEEETTEE
T ss_pred C---------CCEEEEecCCCCCHHHHHHhcccc--CCHHHHHHHHHHHHHHHHHHHH-CCcccCCCccceEEECCCCcE
Confidence 2 468999999 5799999775421 2344466679999999999997 899999999999999999999
Q ss_pred EEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh-
Q 004157 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL- 246 (771)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l- 246 (771)
||+|||++......... .......+..|+|||++.+ ..++.++|+|||||++|+|++ |..||.....
T Consensus 153 kl~Dfg~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~ 221 (281)
T 3cc6_A 153 KLGDFGLSRYIEDEDYY-----KASVTRLPIKWMSPESINF------RRFTTASDVWMFAVCMWEILSFGKQPFFWLENK 221 (281)
T ss_dssp EECCCCGGGCC--------------CCCCCGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG
T ss_pred EeCccCCCccccccccc-----ccccCCCCcceeCchhhcc------CCCCchhccHHHHHHHHHHHhCCCCCcccCChH
Confidence 99999999876542110 0111122347999999875 356789999999999999998 8888743211
Q ss_pred ------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 ------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 ------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....+|..+.+++.+||..+|.+||++.+++++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~ 267 (281)
T 3cc6_A 222 DVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCS 267 (281)
T ss_dssp GHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHH
Confidence 1123567789999999999999999999999875
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.5e-32 Score=297.76 Aligned_cols=240 Identities=16% Similarity=0.190 Sum_probs=183.4
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEECCCCCcE----EEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEe
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPV----SIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~V----aIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~ 90 (771)
+...+|++.+.||.|+ | +||+|+++.+++.| ++|.+.... .......+.+|++++++++||||+++++++..
T Consensus 12 l~~~~y~~~~~lG~G~~g--~Vy~~~~~~~~~~~~~kv~iK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 88 (327)
T 3lzb_A 12 LKETEFKKIKVLGSGAFG--TVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLT 88 (327)
T ss_dssp CCTTTEEEEEEEEECSSE--EEEEEEECCTTCSCCEEEEEEEECCCS-SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEES
T ss_pred cCHhHceEEEEeeeCCCe--EEEEEEEcCCCceEEEEEEEEeecccc-CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEec
Confidence 3466899999999998 8 99999999888876 555554322 22345678899999999999999999999985
Q ss_pred cccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcE
Q 004157 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDW 168 (771)
Q Consensus 91 e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~ 168 (771)
. ..++|+|++ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+
T Consensus 89 ~---------~~~~v~~~~~~g~L~~~l~~~~~~--~~~~~~~~i~~qi~~aL~~LH~-~~ivH~Dikp~NIl~~~~~~~ 156 (327)
T 3lzb_A 89 S---------TVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNYLED-RRLVHRDLAARNVLVKTPQHV 156 (327)
T ss_dssp S---------SEEEEECCCSSCBHHHHHHHTTTC--CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEEEETTEE
T ss_pred C---------CceEEEEecCCCcHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHhh-CCCcCCCCCHHHEEEcCCCCE
Confidence 3 478889998 5799998875321 2344466779999999999997 899999999999999999999
Q ss_pred EEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhhh
Q 004157 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR 247 (771)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l~ 247 (771)
||+|||++......... ........+..|+|||++.+ ..++.++|+|||||++|+|++ |..||......
T Consensus 157 kL~DfG~a~~~~~~~~~----~~~~~~~~t~~y~aPE~~~~------~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~ 226 (327)
T 3lzb_A 157 KITDFGLAKLLGAEEKE----YHAEGGKVPIKWMALESILH------RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 226 (327)
T ss_dssp EECCTTC--------------------CCCGGGSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG
T ss_pred EEccCcceeEccCcccc----ccccCCCccccccCHHHHcC------CCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH
Confidence 99999999876542111 11112223347999999876 467789999999999999999 88888643211
Q ss_pred -------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 -------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 -------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
....++..+..++.+||..+|.+||++.++++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 272 (327)
T 3lzb_A 227 EISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIE 272 (327)
T ss_dssp GHHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 123467789999999999999999999999864
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=99.98 E-value=3.5e-33 Score=304.06 Aligned_cols=241 Identities=13% Similarity=0.143 Sum_probs=189.7
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch---------------hHHHHHHHHHHHHhcCCCCCee
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD---------------GHLAAARNGVKRLRTVRHPNIL 82 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~---------------~~~~~~~~ei~~Lk~LrHPnIl 82 (771)
.+|++.+.||.|+ | +||+|++ +|+.|+||++....... ...+.+.+|++++++|+||||+
T Consensus 31 ~~y~~~~~lg~G~~g--~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~ 106 (348)
T 2pml_X 31 NDYRIIRTLNQGKFN--KIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCL 106 (348)
T ss_dssp TTEEEEEEEECCSSC--CEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBC
T ss_pred CceEEEEEEcCCCCe--EEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcc
Confidence 4799999999998 8 9999998 89999999998532111 1126789999999999999999
Q ss_pred EEeeeEEecccCcCCcccEEEEEecCC--cchHHH------HHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecC
Q 004157 83 AFLHSTEVENIDATSTKITIYIVTEPV--MPLSEK------IKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGN 154 (771)
Q Consensus 83 kv~d~~e~e~~d~~~~~~~iyIVtE~v--~~L~~~------L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~d 154 (771)
+++++++.+ ..+|+||||+ ++|.++ +.... ........+..++.||+.||.|||++.+++|||
T Consensus 107 ~~~~~~~~~--------~~~~lv~e~~~~~~L~~~~~~~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~d 177 (348)
T 2pml_X 107 TCEGIITNY--------DEVYIIYEYMENDSILKFDEYFFVLDKNY-TCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRD 177 (348)
T ss_dssp CCSEEEESS--------SEEEEEEECCTTCBSSEESSSEESSCSSS-CCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCC
T ss_pred eEEEEEeeC--------CeEEEEEeccCCCcHHHHHHHhhhhhhcc-ccCCCHHHHHHHHHHHHHHHHHHhccCCEeecC
Confidence 999999864 4899999999 478877 43311 122334556777999999999999648999999
Q ss_pred CCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCC-cchHHHHHHHHHH
Q 004157 155 VCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPW-SIDSWGLGCLIYE 233 (771)
Q Consensus 155 Ikp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~-~~Di~SLG~li~e 233 (771)
|+|+||+++.+|.+||+|||++....... .....++..|+|||++.+. ..+.. ++|+|||||++|+
T Consensus 178 l~p~Nil~~~~~~~kl~dfg~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~-----~~~~~~~~Di~slG~il~~ 244 (348)
T 2pml_X 178 VKPSNILMDKNGRVKLSDFGESEYMVDKK--------IKGSRGTYEFMPPEFFSNE-----SSYNGAKVDIWSLGICLYV 244 (348)
T ss_dssp CCGGGEEECTTSCEEECCCTTCEECBTTE--------ECSSCSCGGGCCGGGGSSC-----CCEEHHHHHHHHHHHHHHH
T ss_pred CChHhEEEcCCCcEEEecccccccccccc--------ccCCCCCcCccCchhhcCC-----CCCCcchhhHHHHHHHHHH
Confidence 99999999999999999999998764321 1122344589999998763 12333 8999999999999
Q ss_pred HhhCCCCCChhhh-----hc--------c-------------------CCCCcchHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 234 LFSGMRLSKTEEL-----RN--------T-------------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 234 l~~g~~p~~~~~l-----~~--------~-------------------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
|++|..||..... .. . ..+|..+.+++.+||..+|.+||++.++++|
T Consensus 245 l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h- 323 (348)
T 2pml_X 245 MFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH- 323 (348)
T ss_dssp HHHSSCSSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS-
T ss_pred HHhCCCCCCCCCcHHHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC-
Confidence 9999988853211 00 0 3467789999999999999999999999998
Q ss_pred CCCcc
Q 004157 282 EYFQN 286 (771)
Q Consensus 282 ~fF~n 286 (771)
+||.+
T Consensus 324 p~f~~ 328 (348)
T 2pml_X 324 EWLAD 328 (348)
T ss_dssp GGGTT
T ss_pred ccccC
Confidence 56654
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=99.98 E-value=9.4e-33 Score=299.20 Aligned_cols=239 Identities=16% Similarity=0.185 Sum_probs=181.7
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcE----EEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEec
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPV----SIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~V----aIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e 91 (771)
...+|++.+.||.|+ | +||+|+++.+|+.| +||.+.... .......+.+|++++++++||||+++++++...
T Consensus 13 ~~~~y~~~~~lG~G~~g--~Vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 89 (327)
T 3poz_A 13 KETEFKKIKVLGSGAFG--TVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTS 89 (327)
T ss_dssp CGGGEEEEEEEEEETTE--EEEEEEECC----CCEEEEEEEC--------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS
T ss_pred CHHHcccceEEeeCCCe--EEEEEEEcCCCceEEEEEEEeeccccc-CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC
Confidence 456799999999998 8 99999998888765 666654322 223456788999999999999999999999853
Q ss_pred ccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEE
Q 004157 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWK 169 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~K 169 (771)
..++|+|++ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+|
T Consensus 90 ---------~~~~v~e~~~~g~L~~~l~~~~~~--~~~~~~~~~~~qi~~~l~~LH~-~~ivH~Dikp~NIll~~~~~~k 157 (327)
T 3poz_A 90 ---------TVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNYLED-RRLVHRDLAARNVLVKTPQHVK 157 (327)
T ss_dssp ---------SEEEEEECCTTCBHHHHHHHSTTS--CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEEEETTEEE
T ss_pred ---------CeEEEEEecCCCcHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHhh-CCeeCCCCChheEEECCCCCEE
Confidence 468889998 5799998875321 2344466679999999999997 8999999999999999999999
Q ss_pred EEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhhh-
Q 004157 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR- 247 (771)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l~- 247 (771)
|+|||+++........ ........+..|+|||++.+ ..++.++|+|||||++|||++ |..||......
T Consensus 158 l~Dfg~a~~~~~~~~~----~~~~~~~~t~~y~aPE~~~~------~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~ 227 (327)
T 3poz_A 158 ITDFGLAKLLGAEEKE----YHAEGGKVPIKWMALESILH------RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 227 (327)
T ss_dssp ECCTTHHHHHTTTCC-----------CCCGGGSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG
T ss_pred EccCcceeEccCCccc----ccccCCCccccccChHHhcc------CCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH
Confidence 9999999876543211 11112223447999999876 467789999999999999999 88888643211
Q ss_pred ------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 ------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 ------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
....++..+..++.+||..+|.+||++.+++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 272 (327)
T 3poz_A 228 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 272 (327)
T ss_dssp HHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred HHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 113456779999999999999999999999875
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.7e-32 Score=296.18 Aligned_cols=239 Identities=14% Similarity=0.142 Sum_probs=185.7
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
..+|++.+.||.|+ | +||+|+.+ +|+.|+||++....... ....+.+|+++++.++||||+++++++...
T Consensus 29 ~~~y~~~~~lg~G~~g--~V~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----- 99 (326)
T 3uim_A 29 SDNFSNKNILGRGGFG--KVYKGRLA-DGTLVAVKRLKEERTQG-GELQFQTEVEMISMAVHRNLLRLRGFCMTP----- 99 (326)
T ss_dssp TTSSCSTTEEECCSSS--EEEEECCS-SSCCEEEEECCC------CCCHHHHHHHGGGTCCCTTBCCCCEEECCS-----
T ss_pred hhccccceeEecCCCc--EEEEEEec-CCCEEEEEEeccccCch-HHHHHHHHHHHHHhccCCCccceEEEEecC-----
Confidence 45799999999998 8 99999855 69999999987643222 122578899999999999999999999864
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCC-CCcHHHHHHHHHHHHHHHHHHHcCC---CceecCCCCCCEEEcCCCcEEE
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEG-SQRDEYYAWGLNQIAKAVSFLNNDC---KLVHGNVCLSSVVVTQTLDWKL 170 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~-~~~~~~i~~gl~QI~~aL~fLH~~~---~ivH~dIkp~NI~v~~~G~~KL 170 (771)
...|+||||+ ++|.+++....... ......+..++.||+.||.|||+ . +++||||||+||+++.+|.+||
T Consensus 100 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~-~~~~~ivH~Dlkp~Nil~~~~~~~kl 175 (326)
T 3uim_A 100 ---TERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHD-HCDPKIIHRDVKAANILLDEEFEAVV 175 (326)
T ss_dssp ---SCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHH-SSSSCEECCCCSGGGEEECTTCCEEE
T ss_pred ---CceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeCCCchhhEEECCCCCEEe
Confidence 3679999999 48999998754322 23344566779999999999997 6 9999999999999999999999
Q ss_pred EccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh---
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--- 247 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~--- 247 (771)
+|||++........ .......++..|+|||++.+. .++.++|+|||||++|+|++|..||......
T Consensus 176 ~Dfg~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~ 244 (326)
T 3uim_A 176 GDFGLAKLMDYKDT-----HVTTAVRGTIGHIAPEYLSTG------KSSEKTDVFGYGVMLLELITGQRAFDLARLANDD 244 (326)
T ss_dssp CCCSSCEECCSSSS-----CEECCCCSCGGGCCHHHHHHS------EECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTS
T ss_pred ccCccccccCcccc-----cccccccCCcCccCHHHhccC------CCCccccchhHHHHHHHHHhCCCccccccccccc
Confidence 99999987653211 111122345589999998653 4567999999999999999999998532211
Q ss_pred ------------------cc------CCC----CcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 ------------------NT------ASI----PKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 ------------------~~------~~I----P~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.. ..+ +..+.+++.+||+.+|.+||++.+++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 305 (326)
T 3uim_A 245 DVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRM 305 (326)
T ss_dssp CSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred chhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHH
Confidence 00 011 2457888999999999999999999876
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.1e-32 Score=298.57 Aligned_cols=241 Identities=17% Similarity=0.199 Sum_probs=189.4
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCC-----cEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEe
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGS-----PVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEV 90 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~-----~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~ 90 (771)
...|++++.||.|+ | +||+|++..++. .|+||++.... .....+.+.+|+++++.| +||||++++++++.
T Consensus 45 ~~~~~~~~~lG~G~~g--~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 121 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFG--KVVEATAFGLGKEDAVLKVAVKMLKSTA-HADEKEALMSELKIMSHLGQHENIVNLLGACTH 121 (333)
T ss_dssp TTSEEEEEEEEECSSE--EEEEEEETTCSSSCCCCEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred HHHceeeeEeccCCCc--ceEEEEecCCCcccchhHHHHHhccccc-ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec
Confidence 44689999999998 8 999999987765 79999997643 334567788999999999 89999999999976
Q ss_pred cccCcCCcccEEEEEecCC--cchHHHHHHhCC-----------CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCC
Q 004157 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGL-----------EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCL 157 (771)
Q Consensus 91 e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~-----------~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp 157 (771)
. ..+|+||||+ ++|.+++..... ........+..++.||+.||.|||+ .+++||||||
T Consensus 122 ~--------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~ivH~Dlkp 192 (333)
T 2i1m_A 122 G--------GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS-KNCIHRDVAA 192 (333)
T ss_dssp S--------SSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSG
T ss_pred C--------CceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhc-CCcccCCccc
Confidence 3 3789999999 489999876421 1112344566779999999999997 8999999999
Q ss_pred CCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-
Q 004157 158 SSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS- 236 (771)
Q Consensus 158 ~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~- 236 (771)
+||+++.+|.+||+|||++........ .........+..|+|||++.+ ..++.++|+|||||++|+|++
T Consensus 193 ~NIl~~~~~~~kl~Dfg~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~el~t~ 262 (333)
T 2i1m_A 193 RNVLLTNGHVAKIGDFGLARDIMNDSN----YIVKGNARLPVKWMAPESIFD------CVYTVQSDVWSYGILLWEIFSL 262 (333)
T ss_dssp GGCEEEGGGEEEBCCCGGGCCGGGCTT----SEECSSCEECGGGSCHHHHHH------CCCCHHHHHHHHHHHHHHHTTT
T ss_pred ceEEECCCCeEEECccccccccccccc----eeecCCCCCCccccCHHHhcc------CCCChHHHHHHHHHHHHHHHcC
Confidence 999999999999999999986543211 011111122347999999876 356789999999999999998
Q ss_pred CCCCCChhhh--------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 237 GMRLSKTEEL--------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 237 g~~p~~~~~l--------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
|..||..... .....+|..+.+++.+||+.+|.+||++.+++++
T Consensus 263 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 320 (333)
T 2i1m_A 263 GLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSF 320 (333)
T ss_dssp SCCSSTTCCSSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCCcccchhHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence 7777753211 1123467889999999999999999999998764
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.4e-32 Score=297.23 Aligned_cols=242 Identities=13% Similarity=0.139 Sum_probs=191.8
Q ss_pred CCCCceecCCCCCCC-CceEEEEeE----ECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEec
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGT----SKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~----~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e 91 (771)
...+|++.+.||.|+ | +||+|+ ++.+++.|+||++... .....+.+++|++++++|+||||+++++++..+
T Consensus 21 ~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 96 (327)
T 3lxl_A 21 EERHLKYISQLGKGNFG--SVELCRYDPLGDNTGALVAVKQLQHS--GPDQQRDFQREIQILKALHSDFIVKYRGVSYGP 96 (327)
T ss_dssp CGGGEEEEEEEEEETTE--EEEEEEECTTSSSCSEEEEEEEESSC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS
T ss_pred chhhhhhhhhccCCCCe--EEEEEEeccCCCCcceEEEEEEeccC--CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecC
Confidence 456799999999998 8 999998 5678899999999764 234456789999999999999999999998754
Q ss_pred ccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEE
Q 004157 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWK 169 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~K 169 (771)
+ ...+||||||+ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+|
T Consensus 97 ~------~~~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~i~~qi~~al~~lH~-~~ivH~Dikp~NIl~~~~~~~k 167 (327)
T 3lxl_A 97 G------RQSLRLVMEYLPSGCLRDFLQRHRAR--LDASRLLLYSSQICKGMEYLGS-RRCVHRDLAARNILVESEAHVK 167 (327)
T ss_dssp S------SCEEEEEEECCTTCBHHHHHHHHGGG--CCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEEEETTEEE
T ss_pred C------CceEEEEEeecCCCCHHHHHHhcccC--CCHHHHHHHHHHHHHHHHHHHh-CCccCCCCChhhEEECCCCCEE
Confidence 4 34899999999 5799999874321 2344566779999999999997 8999999999999999999999
Q ss_pred EEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh---
Q 004157 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--- 246 (771)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l--- 246 (771)
|+|||++.......... .......++..|+|||++.+. .++.++|+|||||++|+|++|..|+.....
T Consensus 168 l~Dfg~~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~ 238 (327)
T 3lxl_A 168 IADFGLAKLLPLDKDYY---VVREPGQSPIFWYAPESLSDN------IFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFL 238 (327)
T ss_dssp ECCGGGCEECCTTCSEE---ECSSCCCSCGGGSCHHHHHHC------EEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHH
T ss_pred EcccccceecccCCccc---eeeccCCccccccCHHHhccC------CCChHHhHHHHHHHHHHHHhCCCCCccccchhh
Confidence 99999998765422110 001112233469999998763 456789999999999999999887643211
Q ss_pred -------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 -------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 -------------------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....+|..+.+++.+||..+|.+||++.+++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 297 (327)
T 3lxl_A 239 RMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQ 297 (327)
T ss_dssp HHCC----CCHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hhcccccccccHHHHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 0113567889999999999999999999999865
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=99.98 E-value=1.4e-32 Score=288.44 Aligned_cols=232 Identities=16% Similarity=0.234 Sum_probs=177.7
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch--hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD--GHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~--~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
..+|++.+.||.|+ | +||+|++. |+.|+||++....... ...+.+++|+++++.++||||+++++++..+
T Consensus 6 ~~~~~~~~~lg~G~~g--~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--- 78 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFG--KVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKE--- 78 (271)
T ss_dssp TTSEEEEEEEEEETTE--EEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC---
T ss_pred hhheeeeeeeccCCCe--EEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC---
Confidence 45799999999998 8 99999975 8899999987543222 3356788999999999999999999999863
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCC---ceecCCCCCCEEEcC-----
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCK---LVHGNVCLSSVVVTQ----- 164 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~---ivH~dIkp~NI~v~~----- 164 (771)
..+|+||||+ ++|.++++.... ....+..++.||+.||.|||+ .+ ++||||||+||+++.
T Consensus 79 -----~~~~lv~e~~~~~~L~~~~~~~~~----~~~~~~~i~~~l~~~l~~lH~-~~~~~i~H~dikp~Nil~~~~~~~~ 148 (271)
T 3dtc_A 79 -----PNLCLVMEFARGGPLNRVLSGKRI----PPDILVNWAVQIARGMNYLHD-EAIVPIIHRDLKSSNILILQKVENG 148 (271)
T ss_dssp -------CEEEEECCTTEEHHHHHTSSCC----CHHHHHHHHHHHHHHHHHHHH-SSSSCCCCSCCSGGGEEESSCCSSS
T ss_pred -----CceEEEEEcCCCCCHHHHhhcCCC----CHHHHHHHHHHHHHHHHHHHh-CCCCceeecCCchHHEEEecccccc
Confidence 3789999999 578888864432 344566779999999999997 77 899999999999986
Q ss_pred ---CCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCC
Q 004157 165 ---TLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLS 241 (771)
Q Consensus 165 ---~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~ 241 (771)
++.+||+|||++....... .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||
T Consensus 149 ~~~~~~~kl~Dfg~~~~~~~~~--------~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~~l~~g~~p~ 214 (271)
T 3dtc_A 149 DLSNKILKITDFGLAREWHRTT--------KMSAAGAYAWMAPEVIRA------SMFSKGSDVWSYGVLLWELLTGEVPF 214 (271)
T ss_dssp CCSSCCEEECCCCC---------------------CCGGGSCHHHHHH------CCCSHHHHHHHHHHHHHHHHHCCCTT
T ss_pred cccCcceEEccCCccccccccc--------ccCCCCccceeCHHHhcc------CCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 7889999999997664321 112234458999999876 35678999999999999999999988
Q ss_pred Chhhh--------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 242 KTEEL--------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 242 ~~~~l--------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
..... .....+|..+.+++.+||+.+|.+||++.+++++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 267 (271)
T 3dtc_A 215 RGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQ 267 (271)
T ss_dssp TTSCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCHHHHHHhhhcCCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence 64221 1124567789999999999999999999999875
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.5e-32 Score=287.15 Aligned_cols=235 Identities=14% Similarity=0.134 Sum_probs=187.6
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
..+|++.+.||.|+ | +||+|+++ +++.|+||++...... .+.+.+|++++++++||||+++++++..+
T Consensus 7 ~~~y~~~~~lg~G~~g--~V~~~~~~-~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 75 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFG--LVHLGYWL-NKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVCLEQ----- 75 (267)
T ss_dssp GGGEEEEEEEEEETTE--EEEEEEET-TTEEEEEEEECTTTBC---HHHHHHHHHHHHTCCCTTBCCEEEEECSS-----
T ss_pred hhheeeeeEecCCCce--eEEEEEec-CCCeEEEEEccccCCC---HHHHHHHHHHHHhCCCCCEeeEEEEEccC-----
Confidence 34699999999998 7 99999987 6789999999865433 35688999999999999999999999763
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 76 ---~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~Nili~~~~~~kl~dfg 149 (267)
T 3t9t_A 76 ---APICLVTEFMEHGCLSDYLRTQRG--LFAAETLLGMCLDVCEGMAYLEE-ACVIHRDLAARNCLVGENQVIKVSDFG 149 (267)
T ss_dssp ---SSCEEEECCCTTCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHH-TTCCCSSCCGGGEEECGGGCEEECCTT
T ss_pred ---CCeEEEEeCCCCCcHHHHHhhCcc--cCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCchheEEECCCCCEEEcccc
Confidence 3689999999 479999987532 12344566779999999999997 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhhh------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR------ 247 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l~------ 247 (771)
++.......... ......+..|+|||++.+ ..++.++|+|||||++|+|++ |..||......
T Consensus 150 ~~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i 218 (267)
T 3t9t_A 150 MTRFVLDDQYTS-----STGTKFPVKWASPEVFSF------SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 218 (267)
T ss_dssp GGGGBCCHHHHS-----TTSTTCCGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH
T ss_pred cccccccccccc-----cccccccccccChhhhcC------CCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHH
Confidence 998664321000 011122347999999875 356789999999999999999 78887542211
Q ss_pred -------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 -------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 -------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
....++..+.+++.+||+.+|.+||++.+++++
T Consensus 219 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 258 (267)
T 3t9t_A 219 STGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ 258 (267)
T ss_dssp HTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hcCCcCCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 123457789999999999999999999998864
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2.7e-32 Score=291.79 Aligned_cols=236 Identities=11% Similarity=0.154 Sum_probs=184.5
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCC--CchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTN--AQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~--~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
|..++.||.|+ | +||+|+. +++.|+||++.... ..+...+.+.+|++++++|+||||+++++++...
T Consensus 33 ~~~~~~lg~G~~g--~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------ 102 (307)
T 2nru_A 33 SVGGNKMGEGGFG--VVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDG------ 102 (307)
T ss_dssp TTTCCEEEECSSE--EEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSS------
T ss_pred cccCCccccCCCe--EEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecC------
Confidence 66678899998 8 9999986 58999999997543 2234567889999999999999999999999763
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+|+||||+ ++|.+++.............+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 103 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~-~~i~H~dlkp~Nili~~~~~~kl~Dfg~ 179 (307)
T 2nru_A 103 --DDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE-NHHIHRDIKSANILLDEAFTAKISDFGL 179 (307)
T ss_dssp --SSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHH-TTEECSCCCGGGEEECTTCCEEECCCTT
T ss_pred --CceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhc-CCeecCCCCHHHEEEcCCCcEEEeeccc
Confidence 3789999999 5799998764433333455566779999999999997 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc-------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------- 248 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~------- 248 (771)
+........ ........++..|+|||++.+. ++.++|+|||||++|+|++|.+||.......
T Consensus 180 ~~~~~~~~~----~~~~~~~~g~~~y~aPE~~~~~-------~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 248 (307)
T 2nru_A 180 ARASEKFAQ----TVMTSRIVGTTAYMAPEALRGE-------ITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKE 248 (307)
T ss_dssp CEECCSCSS----CEECSSCCSCGGGCCHHHHTTE-------ECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHH
T ss_pred ccccccccc----cccccccCCCcCcCChHHhcCC-------CCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHH
Confidence 986654211 1111122344589999998753 4578999999999999999998875422100
Q ss_pred ----------------cC----CCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 249 ----------------TA----SIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 249 ----------------~~----~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.. ..+..+.+++.+||+.+|.+||++.+++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~ 300 (307)
T 2nru_A 249 EIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL 300 (307)
T ss_dssp HHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred HhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 01 112457788999999999999999998864
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=6.1e-33 Score=309.05 Aligned_cols=247 Identities=14% Similarity=0.184 Sum_probs=189.4
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
....|++++.||.|+ | +||+|+++.+|+.|+||++...... ...+.+.+|+++|++|+||||++++++++..+
T Consensus 7 ~~~~y~i~~~LG~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--- 80 (396)
T 4eut_A 7 SNHLWLLSDILGQGATA--NVFRGRHKKTGDLFAIKVFNNISFL-RPVDVQMREFEVLKKLNHKNIVKLFAIEEETT--- 80 (396)
T ss_dssp SSEEEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEECGGGGG-SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTT---
T ss_pred CCCceEEEEEEEcCCCe--EEEEEEECCCCcEEEEEEecccccc-chHHHHHHHHHHHHhcCCCCCCeEEEeeccCC---
Confidence 356799999999998 8 9999999999999999999753222 23556788999999999999999999998654
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEE----cCCCcEE
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV----TQTLDWK 169 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v----~~~G~~K 169 (771)
...+||||||| ++|.++++............+..++.||+.||.|||+ .+++||||||+||++ +.++.+|
T Consensus 81 ---~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivH~Dlkp~NIll~~~~~~~~~~k 156 (396)
T 4eut_A 81 ---TRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE-NGIVHRNIKPGNIMRVIGEDGQSVYK 156 (396)
T ss_dssp ---TCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEEEECTTSCEEEE
T ss_pred ---CCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHH-CCEEECCcCHHHEEEeecCCCceeEE
Confidence 34789999999 4799998765432223455567779999999999997 899999999999999 7788899
Q ss_pred EEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccc--cCCCCCcchHHHHHHHHHHHhhCCCCCChhh--
Q 004157 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAV--RKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-- 245 (771)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~--~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-- 245 (771)
|+|||++........ .....++..|+|||++.+..... ...++.++|+|||||++|||++|..||....
T Consensus 157 L~DFG~a~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~ 229 (396)
T 4eut_A 157 LTDFGAARELEDDEQ-------FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGP 229 (396)
T ss_dssp ECCGGGCEECCCGGG-------SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCT
T ss_pred EecCCCceEccCCCc-------cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcc
Confidence 999999987654211 11223456899999976410000 0134468999999999999999998874211
Q ss_pred ------hhc-c--------------------------------CCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 246 ------LRN-T--------------------------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 246 ------l~~-~--------------------------------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
+.. . ..++..+.+++.+||..||.+|+++.+++++
T Consensus 230 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~ 303 (396)
T 4eut_A 230 RRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAE 303 (396)
T ss_dssp TTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHH
T ss_pred cchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHH
Confidence 000 0 0122356788899999999999999998764
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=99.98 E-value=1.6e-32 Score=314.76 Aligned_cols=236 Identities=17% Similarity=0.246 Sum_probs=189.8
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
..|++.+.||.|+ | +||+|+++.++..|+||++..... ..+.+.+|+++|++|+||||+++++++..+
T Consensus 220 ~~~~~~~~lG~G~fg--~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~------ 288 (495)
T 1opk_A 220 TDITMKHKLGGGQYG--EVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTRE------ 288 (495)
T ss_dssp GGEEEEEESGGGTTS--SEEEEEEGGGTEEEEEEECCSSSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECSS------
T ss_pred HHceeeeEecCCCCe--EEEEEEEcCCCeEEEEEEecCccc---chHHHHHHHHHHHhcCCCCEeeEEEEEecC------
Confidence 3588899999998 8 999999998899999999875432 245688999999999999999999999763
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+||||||| ++|.++|+...... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 289 --~~~~lv~E~~~~g~L~~~l~~~~~~~-~~~~~~~~i~~qi~~~L~~LH~-~~ivHrDlkp~NIll~~~~~~kl~DFG~ 364 (495)
T 1opk_A 289 --PPFYIITEFMTYGNLLDYLRECNRQE-VSAVVLLYMATQISSAMEYLEK-KNFIHRNLAARNCLVGENHLVKVADFGL 364 (495)
T ss_dssp --SSCEEEEECCTTCBHHHHHHHSCTTT-SCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEECGGGCEEECCTTC
T ss_pred --CcEEEEEEccCCCCHHHHHHhcCcCC-CCHHHHHHHHHHHHHHHHHHHh-CCcccCCCChhhEEECCCCcEEEeeccc
Confidence 3789999999 58999998754322 2344466679999999999997 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhhh-------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR------- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l~------- 247 (771)
++......... ......+..|+|||++.+ ..++.++|+|||||++|||++ |..||......
T Consensus 365 a~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~------~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~ 433 (495)
T 1opk_A 365 SRLMTGDTYTA-----HAGAKFPIKWTAPESLAY------NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE 433 (495)
T ss_dssp EECCTTCCEEC-----CTTCCCCGGGCCHHHHHH------CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH
T ss_pred ceeccCCceee-----cCCCcCCcceeCHhHHhc------CCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 98765421100 111122347999999875 346679999999999999998 87777543211
Q ss_pred ------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 ------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 ------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
....+|..+.+++.+||+.+|.+||++.++++.
T Consensus 434 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~ 472 (495)
T 1opk_A 434 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQA 472 (495)
T ss_dssp TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred cCCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence 124577889999999999999999999998763
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.98 E-value=6e-32 Score=287.32 Aligned_cols=242 Identities=15% Similarity=0.154 Sum_probs=187.6
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCC---cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGS---PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~---~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
...|++++.||.|+ | +||+|++..++. .|+||++.... .....+.+.+|+++++.++||||+++++++...+
T Consensus 20 ~~~~~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~- 95 (298)
T 3pls_A 20 RVVTHSDRVIGKGHFG--VVYHGEYIDQAQNRIQCAIKSLSRIT-EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPE- 95 (298)
T ss_dssp GEEEEEEEEEEEETTE--EEEEEEEECSSSCEEEEEEEEETTCC-SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSS-
T ss_pred ceEEccCceeccCCCc--eEEEEEEecCCCceeeeeeeeccccc-cHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCC-
Confidence 45688889999998 8 999999776655 79999987533 3345678889999999999999999999997643
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEE
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~ 171 (771)
...|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+
T Consensus 96 ------~~~~~v~e~~~~~~L~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~LH~-~~i~H~dikp~Nili~~~~~~kl~ 166 (298)
T 3pls_A 96 ------GLPHVLLPYMCHGDLLQFIRSPQR--NPTVKDLISFGLQVARGMEYLAE-QKFVHRDLAARNCMLDESFTVKVA 166 (298)
T ss_dssp ------SCCEEEECCCTTCBHHHHHHCTTC--CCBHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEECTTCCEEEC
T ss_pred ------CCcEEEEecccCCCHHHHHhcccc--CCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCcceEEEcCCCcEEeC
Confidence 2458999999 579999976432 12344566679999999999997 899999999999999999999999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCC-CCCChhhh----
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM-RLSKTEEL---- 246 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~-~p~~~~~l---- 246 (771)
|||++........... ........+..|+|||.+.+ ..++.++|+|||||++|+|++|. +++.....
T Consensus 167 Dfg~~~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~ 238 (298)
T 3pls_A 167 DFGLARDILDREYYSV--QQHRHARLPVKWTALESLQT------YRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLT 238 (298)
T ss_dssp CTTSSCTTTTGGGGCS--CCSSCTTCGGGGSCHHHHTT------CCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHH
T ss_pred cCCCcccccCCccccc--ccCcCCCCCccccChhhhcc------CCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHH
Confidence 9999986644211100 01111233458999999876 35678999999999999999955 44432211
Q ss_pred ---------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 ---------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 ---------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....+|..+.+++.+||+.+|.+||++.++++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 281 (298)
T 3pls_A 239 HFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGE 281 (298)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHhhcCCCCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 1123567789999999999999999999998864
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=3.3e-32 Score=292.32 Aligned_cols=248 Identities=19% Similarity=0.211 Sum_probs=189.1
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC--CCCeeEEeeeEEeccc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR--HPNILAFLHSTEVENI 93 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr--HPnIlkv~d~~e~e~~ 93 (771)
....|++.+.||.|+ | +||+|+++ +++.|+||++............+++|++++++|+ ||||+++++++..+
T Consensus 26 ~~~~y~~~~~lg~G~~g--~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~-- 100 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSS--KVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD-- 100 (313)
T ss_dssp TTEEEEEEEEEECCSSE--EEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECS--
T ss_pred ccceEEEEEEecCCCCE--EEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecC--
Confidence 345699999999998 8 99999986 5899999999876655566788999999999998 59999999999863
Q ss_pred CcCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 94 DATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
..+|||||+. ++|.+++...... ....+..++.||+.||.|||+ .+++||||||+||+++ +|.+||+|
T Consensus 101 ------~~~~lv~e~~~~~L~~~l~~~~~~---~~~~~~~i~~qi~~aL~~LH~-~~ivH~dlkp~NIl~~-~~~~kL~D 169 (313)
T 3cek_A 101 ------QYIYMVMECGNIDLNSWLKKKKSI---DPWERKSYWKNMLEAVHTIHQ-HGIVHSDLKPANFLIV-DGMLKLID 169 (313)
T ss_dssp ------SEEEEEECCCSEEHHHHHHHCSSC---CHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEEE-TTEEEECC
T ss_pred ------CEEEEEEecCCCcHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHH-CCceecCCCcccEEEE-CCeEEEee
Confidence 4899999977 5799999875432 334456679999999999997 8999999999999996 58999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhcccccccc-----ccCCCCCcchHHHHHHHHHHHhhCCCCCChhh--
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTA-----VRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-- 245 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~-----~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-- 245 (771)
||++......... .......++..|+|||++.+.... ....++.++|+|||||++|+|++|..||....
T Consensus 170 fg~~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 245 (313)
T 3cek_A 170 FGIANQMQPDTTS----VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 245 (313)
T ss_dssp CSSSCC------------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSH
T ss_pred ccccccccCcccc----ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHH
Confidence 9999876542110 111122345589999998641100 01246679999999999999999998875321
Q ss_pred ---hh----------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 246 ---LR----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 246 ---l~----------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
+. .....+..+.+++.+||..+|.+||++.++++| +||+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h-~~~~ 297 (313)
T 3cek_A 246 ISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH-PYVQ 297 (313)
T ss_dssp HHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS-HHHH
T ss_pred HHHHHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcC-cccc
Confidence 10 112346679999999999999999999999998 4553
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=99.98 E-value=4.8e-32 Score=288.57 Aligned_cols=243 Identities=15% Similarity=0.173 Sum_probs=185.3
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCC---cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGS---PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~---~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~ 92 (771)
....|++++.||.|+ | +||+|+++.++. .|+||.+.... .....+.+.+|++++++++||||+++++++..+
T Consensus 23 ~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~~avk~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~- 98 (298)
T 3f66_A 23 SSLIVHFNEVIGRGHFG--CVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS- 98 (298)
T ss_dssp GGEEEEEEEEEEEETTE--EEEEEEEC-----CEEEEEEEETTCC-SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCS-
T ss_pred cceehhhcceeeecCCc--eEEEEEEecCCCceeEEEEEecccCC-CHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcC-
Confidence 456799999999998 8 999999765443 58999987533 334567788999999999999999999986543
Q ss_pred cCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEE
Q 004157 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL 170 (771)
....|+||||+ ++|.++++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||
T Consensus 99 ------~~~~~~v~e~~~~~~L~~~l~~~~~~--~~~~~~~~i~~ql~~~l~~lH~-~~i~H~dikp~Nil~~~~~~~kl 169 (298)
T 3f66_A 99 ------EGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMKYLAS-KKFVHRDLAARNCMLDEKFTVKV 169 (298)
T ss_dssp ------SSCCEEEEECCTTCBHHHHHHCTTCC--CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEECTTCCEEE
T ss_pred ------CCceEEEEeCCCCCCHHHHHHhcccC--CCHHHHHHHHHHHHHHHHHHHh-CCccCCCCchheEEECCCCCEEE
Confidence 23689999999 4899999764321 2344456678999999999997 89999999999999999999999
Q ss_pred EccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhC-CCCCChhhh---
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG-MRLSKTEEL--- 246 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g-~~p~~~~~l--- 246 (771)
+|||++.......... .........+..|+|||.+.+ ..++.++|+|||||++|+|++| .+++.....
T Consensus 170 ~Dfg~a~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~ 241 (298)
T 3f66_A 170 ADFGLARDMYDKEYYS--VHNKTGAKLPVKWMALESLQT------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI 241 (298)
T ss_dssp CSCGGGCCCSCGGGCB--C-----CCBCGGGSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTH
T ss_pred Ccccccccccccchhc--cccccCCCCCccccChHHhcC------CCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHH
Confidence 9999998765422111 001112233447999999876 3567899999999999999995 455543211
Q ss_pred ----------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 ----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 ----------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....+|..+.+++.+||+.+|.+||++.++++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~ 285 (298)
T 3f66_A 242 TVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 285 (298)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 1124567889999999999999999999998864
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=4e-32 Score=291.66 Aligned_cols=229 Identities=14% Similarity=0.132 Sum_probs=180.2
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
..|++.+.||.|+ | +||+|+++ ++.|+||++... ...+.+.+|++.|++++||||+++++++.+
T Consensus 8 ~~~~~~~~lg~G~~g--~V~~~~~~--~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~------- 72 (307)
T 2eva_A 8 KEIEVEEVVGRGAFG--VVCKAKWR--AKDVAIKQIESE----SERKAFIVELRQLSRVNHPNIVKLYGACLN------- 72 (307)
T ss_dssp GGEEEEEEEECCSSS--EEEEEEET--TEEEEEEECSST----THHHHHHHHHHHHHHCCCTTBCCEEEBCTT-------
T ss_pred hHeeeeeEeecCCCc--eEEEEEEC--CeeEEEEEecCh----hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-------
Confidence 4699999999998 8 99999875 789999998643 245678899999999999999999998763
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcC--CCceecCCCCCCEEEcCCCc-EEEEc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNND--CKLVHGNVCLSSVVVTQTLD-WKLHA 172 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~--~~ivH~dIkp~NI~v~~~G~-~KL~d 172 (771)
.+|+||||+ ++|.+++.............+..++.||+.||.|||+. .+++||||||+||+++.+|. +||+|
T Consensus 73 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~D 149 (307)
T 2eva_A 73 ---PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICD 149 (307)
T ss_dssp ---TTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECC
T ss_pred ---CcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcc
Confidence 369999999 58999998754322233444556689999999999953 58999999999999999887 79999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-------
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE------- 245 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~------- 245 (771)
||++....... ....++..|+|||++.+ ..++.++|+|||||++|+|++|..||....
T Consensus 150 fg~~~~~~~~~---------~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~ 214 (307)
T 2eva_A 150 FGTACDIQTHM---------TNNKGSAAWMAPEVFEG------SNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM 214 (307)
T ss_dssp CCC---------------------CCTTSSCHHHHTC------CCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHH
T ss_pred ccccccccccc---------ccCCCCCceEChhhhCC------CCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHH
Confidence 99997654311 11234568999999876 357789999999999999999998885321
Q ss_pred --------hhccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 246 --------LRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 246 --------l~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
......+|..+.+++.+||+.+|.+||++.++++.
T Consensus 215 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 257 (307)
T 2eva_A 215 WAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKI 257 (307)
T ss_dssp HHHHTTCCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHhcCCCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 01124678889999999999999999999998864
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.5e-32 Score=288.69 Aligned_cols=244 Identities=15% Similarity=0.169 Sum_probs=178.8
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhc--CCCCCeeEEeeeEEeccc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRT--VRHPNILAFLHSTEVENI 93 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~--LrHPnIlkv~d~~e~e~~ 93 (771)
...+|++.+.||.|+ | +||+|++ +|+.|+||++... ....+.+|.+++.. ++||||+++++++.....
T Consensus 6 ~~~~y~~~~~lg~G~~g--~V~~~~~--~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~ 76 (301)
T 3q4u_A 6 VARDITLLECVGKGRYG--EVWRGSW--QGENVAVKIFSSR-----DEKSWFRETELYNTVMLRHENILGFIASDMTSRH 76 (301)
T ss_dssp CGGGCEEEEEEEECSSE--EEEEEEE--TTEEEEEEEECGG-----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEET
T ss_pred ccCcEEEEEeeccCCCc--EEEEEEE--CCEEEEEEEeccc-----cchhhHHHHHHHHHhhccCcCeeeEEEeeccccC
Confidence 355799999999998 8 9999987 5899999999743 12334445555555 899999999999765432
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHH--------cCCCceecCCCCCCEEEc
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLN--------NDCKLVHGNVCLSSVVVT 163 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH--------~~~~ivH~dIkp~NI~v~ 163 (771)
+ ...+|+||||+ ++|.++++.... ....+..++.||+.||.||| + .+++||||||+||+++
T Consensus 77 ~----~~~~~lv~e~~~~g~L~~~l~~~~~----~~~~~~~i~~~i~~~l~~lH~~~~~~~~~-~~ivH~Dlkp~Nill~ 147 (301)
T 3q4u_A 77 S----STQLWLITHYHEMGSLYDYLQLTTL----DTVSCLRIVLSIASGLAHLHIEIFGTQGK-PAIAHRDLKSKNILVK 147 (301)
T ss_dssp T----EEEEEEEECCCTTCBHHHHHTTCCB----CHHHHHHHHHHHHHHHHHHHSCBCSTTCB-CEEECSCCCGGGEEEC
T ss_pred C----CceeEEehhhccCCCHHHHHhhccc----CHHHHHHHHHHHHHHHHHHHHhhhhccCC-CCeecCCCChHhEEEc
Confidence 2 45799999999 489999965432 34446667999999999999 6 8999999999999999
Q ss_pred CCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhC------
Q 004157 164 QTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG------ 237 (771)
Q Consensus 164 ~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g------ 237 (771)
.+|.+||+|||++.......... ........++..|+|||++.+........++.++|+|||||++|||++|
T Consensus 148 ~~~~~kl~Dfg~a~~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~ 225 (301)
T 3q4u_A 148 KNGQCCIADLGLAVMHSQSTNQL--DVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGI 225 (301)
T ss_dssp TTSCEEECCCTTCEEEETTTTEE--ECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTB
T ss_pred CCCCEEEeeCCCeeecccccccc--cccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccc
Confidence 99999999999997654422110 0001112345589999998763110000223589999999999999999
Q ss_pred ----CCCCChh--------hhh-------ccCCCC---------cchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 238 ----MRLSKTE--------ELR-------NTASIP---------KSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 238 ----~~p~~~~--------~l~-------~~~~IP---------~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
..||... ... ....+| ..+.+++.+||+.+|.+||++.++++.
T Consensus 226 ~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~ 296 (301)
T 3q4u_A 226 VEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKT 296 (301)
T ss_dssp CCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred cccccccccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence 6666321 111 112233 458899999999999999999998763
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=4.4e-32 Score=287.75 Aligned_cols=240 Identities=15% Similarity=0.137 Sum_probs=187.8
Q ss_pred CCCCceecC-CCCCCC-CceEEEEeEEC--CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecc
Q 004157 17 KDLPYNIGD-PYPSAW-GSWSHFQGTSK--DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (771)
Q Consensus 17 ~~~~Y~i~e-~ig~G~-g~wtVy~g~~k--~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~ 92 (771)
...+|.+.+ .||.|+ | +||+|+++ .++..|+||++.... .....+.+.+|++++++|+||||++++++++.
T Consensus 7 ~~~~~~i~~~~lg~G~~g--~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-- 81 (287)
T 1u59_A 7 KRDNLLIADIELGCGNFG--SVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-- 81 (287)
T ss_dssp CGGGEEEEEEEEECCTTE--EEEEEEEC---CCEEEEEEEECSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES--
T ss_pred cHHHhhhhhccccccCce--eEEEeEeccCCCcceEEEEecCCcc-chhHHHHHHHHHHHHHhCCCCCEeEEEEEecC--
Confidence 344677776 899998 8 99999865 457789999998653 33456778999999999999999999999953
Q ss_pred cCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEE
Q 004157 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL 170 (771)
..+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||
T Consensus 82 -------~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~Nili~~~~~~kl 151 (287)
T 1u59_A 82 -------EALMLVMEMAGGGPLHKFLVGKRE--EIPVSNVAELLHQVSMGMKYLEE-KNFVHRDLAARNVLLVNRHYAKI 151 (287)
T ss_dssp -------SSEEEEEECCTTEEHHHHHTTCTT--TSCHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEEEETTEEEE
T ss_pred -------CCcEEEEEeCCCCCHHHHHHhCCc--cCCHHHHHHHHHHHHHHHHHHHH-CCEeeCCCchheEEEcCCCCEEE
Confidence 2589999999 479998864321 12344567779999999999997 89999999999999999999999
Q ss_pred EccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh---
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL--- 246 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l--- 246 (771)
+|||++........... .......+..|+|||++.+ ..++.++|+|||||++|+|++ |..||.....
T Consensus 152 ~Dfg~~~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~ 222 (287)
T 1u59_A 152 SDFGLSKALGADDSYYT---ARSAGKWPLKWYAPECINF------RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV 222 (287)
T ss_dssp CCCTTCEECTTCSCEEC---CCCSSCCCGGGCCHHHHHH------CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHH
T ss_pred CcccceeeeccCcceee---ccccccccccccCHHHhcc------CCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHH
Confidence 99999987654221100 0111122347999999875 345679999999999999998 8888754221
Q ss_pred ----------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 ----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 ----------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....+|..+.+++.+||..+|.+||++.+++++
T Consensus 223 ~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 266 (287)
T 1u59_A 223 MAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQR 266 (287)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHHHhcCCcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 1124678889999999999999999999999875
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=9.3e-33 Score=311.50 Aligned_cols=248 Identities=17% Similarity=0.217 Sum_probs=178.7
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccCcC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d~~ 96 (771)
..|.+.+.||.|+ | +||.+. +.+|+.||||++... ..+.+.+|+++|+++ +||||++++++++.+
T Consensus 15 ~~~~~~~~LG~G~~g--~V~~~~-~~~g~~vAvK~~~~~-----~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~----- 81 (434)
T 2rio_A 15 NLVVSEKILGYGSSG--TVVFQG-SFQGRPVAVKRMLID-----FCDIALMEIKLLTESDDHPNVIRYYCSETTD----- 81 (434)
T ss_dssp SCEEEEEEEEECSTT--CEEEEE-ESSSSEEEEEEEEGG-----GHHHHHHHHHHHHHHTTSTTBCCEEEEEECS-----
T ss_pred heeeccCeEeeCCCe--EEEEEE-EECCeEEEEEEEcHH-----HHHHHHHHHHHHHhccCCCCcCeEEEEEecC-----
Confidence 3477788899998 8 776543 457999999998752 234678899999986 899999999998763
Q ss_pred CcccEEEEEecCC-cchHHHHHHhCCCCCCc----HHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCC------
Q 004157 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQR----DEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT------ 165 (771)
Q Consensus 97 ~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~----~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~------ 165 (771)
..+||||||| ++|.+++.......... ...+..++.||+.||.|||+ .+++||||||+||+++.+
T Consensus 82 ---~~~~lv~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~ivHrDLkp~NILl~~~~~~~~~ 157 (434)
T 2rio_A 82 ---RFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS-LKIIHRDLKPQNILVSTSSRFTAD 157 (434)
T ss_dssp ---SEEEEEECCCSEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEEECCHHHHSC
T ss_pred ---CeEEEEEecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHH-CCccccCCChHhEEEecCcccccc
Confidence 4899999999 68999998754322111 11134469999999999997 899999999999999765
Q ss_pred -------CcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhcccccccc-ccCCCCCcchHHHHHHHHHHHhh-
Q 004157 166 -------LDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTA-VRKSPPWSIDSWGLGCLIYELFS- 236 (771)
Q Consensus 166 -------G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~-~~~~~~~~~Di~SLG~li~el~~- 236 (771)
+.+||+|||++........... .......++..|+|||++.+.... ....++.++|+|||||++|||++
T Consensus 158 ~~~~~~~~~~kL~DFG~a~~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~ 235 (434)
T 2rio_A 158 QQTGAENLRILISDFGLCKKLDSGQSSFR--TNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSK 235 (434)
T ss_dssp CTTCCCSCEEEECCCTTCEECCC----------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred cccCCCceEEEEcccccceecCCCCccce--eeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhC
Confidence 4799999999987754321100 001122455689999998752210 11356789999999999999998
Q ss_pred CCCCCChhhh------hccC-----------CCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 237 GMRLSKTEEL------RNTA-----------SIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 237 g~~p~~~~~l------~~~~-----------~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
|..||..... .... .++..+.+++.+||..+|.+||++.++++| +||.+
T Consensus 236 g~~Pf~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h-p~f~~ 301 (434)
T 2rio_A 236 GKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH-PLFWP 301 (434)
T ss_dssp SCCTTCSTTTHHHHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS-GGGSC
T ss_pred CCCCCCCchhhHHHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC-CccCC
Confidence 8888754211 1111 123568899999999999999999999999 45543
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.6e-32 Score=286.87 Aligned_cols=232 Identities=18% Similarity=0.218 Sum_probs=179.4
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
...+|++.+.||.|+ | +||+|+++ |+.|+||++.... ..+.+.+|++++++|+||||+++++++..+
T Consensus 19 ~~~~y~~~~~lg~G~~g--~V~~~~~~--~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---- 86 (278)
T 1byg_A 19 NMKELKLLQTIGKGEFG--DVMLGDYR--GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEE---- 86 (278)
T ss_dssp CGGGEEEEEEEEECSSC--EEEEEEET--TEEEEEEECCCCC------HHHHHTHHHHTTCCCTTBCCEEEEECCC----
T ss_pred ChhhceEEeEEecCCCc--eEEEEEEc--CCEEEEEEecchh----HHHHHHHHHHHHHhCCCCCEeeEEEEEEcC----
Confidence 335799999999998 8 99999875 8899999987532 345688999999999999999999987543
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
...+|+||||+ ++|.+++....... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+||
T Consensus 87 ---~~~~~lv~e~~~~~~L~~~l~~~~~~~-~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~Nil~~~~~~~~l~Df 161 (278)
T 1byg_A 87 ---KGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEG-NNFVHRDLAARNVLVSEDNVAKVSDF 161 (278)
T ss_dssp -----CCEEEECCCTTEEHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEECTTSCEEECCC
T ss_pred ---CCceEEEEecCCCCCHHHHHHhccccc-CCHHHHHHHHHHHHHHHHHHHh-CCccccCCCcceEEEeCCCcEEEeec
Confidence 23689999999 48999997653110 1233456669999999999997 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhhh-----
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR----- 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l~----- 247 (771)
|++....... .....+..|+|||++.+ ..++.++|+|||||++|+|++ |..||......
T Consensus 162 g~~~~~~~~~---------~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~ 226 (278)
T 1byg_A 162 GLTKEASSTQ---------DTGKLPVKWTAPEALRE------KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR 226 (278)
T ss_dssp CC---------------------CCTTTSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHH
T ss_pred cccccccccc---------cCCCccccccCHHHhCC------CCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 9987654321 11123457999999875 356789999999999999998 88887543211
Q ss_pred --------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 --------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 --------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
....+|..+.+++.+||+.+|.+||++.++++.
T Consensus 227 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 267 (278)
T 1byg_A 227 VEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ 267 (278)
T ss_dssp HTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HhcCCCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHH
Confidence 124567889999999999999999999998763
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=6e-32 Score=295.73 Aligned_cols=239 Identities=11% Similarity=0.074 Sum_probs=185.6
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECC--------CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeE-----
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKD--------DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILA----- 83 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~--------~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlk----- 83 (771)
..+|++.+.||.|+ | +||+|+++. +++.|+||++... ..+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g--~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~~ 111 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQG--ILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------GRLFNEQNFFQRAAKPLQVNKWKKL 111 (352)
T ss_dssp SCEEEEEEEEEEETTE--EEEEEEECC-----------CEEEEEEETT-------STHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred CCeEEEEEEecCCCCe--EEEEEeecCCccccccccCceEEEEEeccc-------chHHHHHHHHHHhcccchhhhhhhh
Confidence 35799999999998 8 999999987 4899999999854 24778999999999999988
Q ss_pred ----------EeeeEEecccCcCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCcee
Q 004157 84 ----------FLHSTEVENIDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVH 152 (771)
Q Consensus 84 ----------v~d~~e~e~~d~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH 152 (771)
+++++..+ ...+||||||+ ++|.+++..... .......+..++.||+.||.|||+ .+++|
T Consensus 112 ~~~~~~~i~~~~~~~~~~-------~~~~~lv~e~~~~~L~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~-~~ivH 182 (352)
T 2jii_A 112 YSTPLLAIPTCMGFGVHQ-------DKYRFLVLPSLGRSLQSALDVSPK-HVLSERSVLQVACRLLDALEFLHE-NEYVH 182 (352)
T ss_dssp TTCTTCSCCCCCEEEEET-------TTEEEEEEECCCEEHHHHHHHSGG-GCCCHHHHHHHHHHHHHHHHHHHH-TTCBC
T ss_pred ccCCccCccchhhccccC-------CcEEEEEecCCCcCHHHHHHhCCc-CCCCHHHHHHHHHHHHHHHHHHHh-CCccC
Confidence 55565542 34899999999 579999987521 112344567779999999999997 89999
Q ss_pred cCCCCCCEEEcCCC--cEEEEccCcccccCCCCCCCCC-CccccccccCCCCCChhccccccccccCCCCCcchHHHHHH
Q 004157 153 GNVCLSSVVVTQTL--DWKLHAFDVLSEFDGNNEAANG-PMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGC 229 (771)
Q Consensus 153 ~dIkp~NI~v~~~G--~~KL~dFgla~~~~~~~~~~~~-~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~ 229 (771)
|||||+||+++.+| .+||+|||++............ ........++..|+|||++.+ ..++.++|+|||||
T Consensus 183 ~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~ 256 (352)
T 2jii_A 183 GNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKG------CGPSRRSDLQSLGY 256 (352)
T ss_dssp SCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTT------CCCCHHHHHHHHHH
T ss_pred CCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHcc------CCCCchhhHHHHHH
Confidence 99999999999998 8999999999876542211100 001112244569999999876 35678999999999
Q ss_pred HHHHHhhCCCCCChhh-----hh--------cc----------CCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 230 LIYELFSGMRLSKTEE-----LR--------NT----------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 230 li~el~~g~~p~~~~~-----l~--------~~----------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
++|+|++|..||.... +. .. ..+|..+.+++.+||..+|.+||++.++++.
T Consensus 257 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~ 330 (352)
T 2jii_A 257 CMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNN 330 (352)
T ss_dssp HHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHH
T ss_pred HHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHH
Confidence 9999999998886432 10 00 2468899999999999999999999998763
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-31 Score=304.43 Aligned_cols=232 Identities=18% Similarity=0.215 Sum_probs=186.5
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
....|++.+.||.|+ | +||+|..+ |+.|+||++.... ..+.+.+|+++|++|+||||+++++++..+
T Consensus 191 ~~~~~~~~~~lG~G~fg--~V~~~~~~--~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---- 258 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFG--DVMLGDYR--GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEE---- 258 (450)
T ss_dssp CGGGEEEEEEEEECSSE--EEEEEEET--TEEEEEEEESSCT----TSHHHHHHHHHHHTCCCTTBCCEEEEEECT----
T ss_pred ChHHeEEEeeecCcCCe--eEEEEEec--CCeEEEEEeCCch----HHHHHHHHHHHHHhccCCCEEEEEEEEEcC----
Confidence 344689999999998 8 99999886 7799999997543 245688999999999999999999998653
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
...+||||||| ++|.++++...... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+||
T Consensus 259 ---~~~~~iv~e~~~~g~L~~~l~~~~~~~-~~~~~~~~~~~qi~~~l~~LH~-~~ivHrDlkp~Nill~~~~~~kl~Df 333 (450)
T 1k9a_A 259 ---KGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEG-NNFVHRDLAARNVLVSEDNVAKVSDF 333 (450)
T ss_dssp ---TSCEEEEEECCTTCBHHHHHHHHCTTT-CCHHHHHHHHHHHHHHHHHHHH-TTEECSCCCGGGEEECTTSCEEECCC
T ss_pred ---CCceEEEEEecCCCcHHHHHHhcCCCC-CCHHHHHHHHHHHHHHHHHHHh-CCeeCCCCCHhhEEECCCCCEEEeeC
Confidence 23689999999 58999998765321 1234456679999999999997 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL------ 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l------ 246 (771)
|+++...... .....+..|+|||++.+ ..++.++|+|||||++|||++ |..||.....
T Consensus 334 G~a~~~~~~~---------~~~~~~~~y~aPE~~~~------~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~ 398 (450)
T 1k9a_A 334 GLTKEASSTQ---------DTGKLPVKWTAPEALRE------KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR 398 (450)
T ss_dssp TTCEECC---------------CCCTTTSCHHHHHS------SCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHH
T ss_pred CCcccccccc---------cCCCCCcceeCHHHhcC------CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 9998553311 11133458999999876 367789999999999999998 8888754221
Q ss_pred -------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 -------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 -------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....+|..+.+++.+||+.+|.+||++.++++.
T Consensus 399 i~~~~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~ 439 (450)
T 1k9a_A 399 VEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQ 439 (450)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 1124577889999999999999999999998753
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.5e-32 Score=292.68 Aligned_cols=242 Identities=14% Similarity=0.187 Sum_probs=188.2
Q ss_pred CCCCceecCCCCCCC-CceEEEEeE----ECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEec
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGT----SKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~----~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e 91 (771)
....|++.+.||.|+ | +||+|+ +..+|+.|+||++... .....+.+.+|++++++|+||||+++++++...
T Consensus 39 ~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 114 (326)
T 2w1i_A 39 EERHLKFLQQLGKGNFG--SVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA 114 (326)
T ss_dssp CGGGEEEEEEEECCSSE--EEEEEEECTTSSSCCEEEEEEEESSC--CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC-
T ss_pred CHHHceeeeeeccCCCe--EEEEEEeccccCCCceEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEec
Confidence 344699999999998 7 999998 4668999999999764 234567789999999999999999999998764
Q ss_pred ccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEE
Q 004157 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWK 169 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~K 169 (771)
+ ...+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+|
T Consensus 115 ~------~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~-~~ivH~dikp~NIli~~~~~~k 185 (326)
T 2w1i_A 115 G------RRNLKLIMEYLPYGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYLGT-KRYIHRDLATRNILVENENRVK 185 (326)
T ss_dssp ---------CCEEEECCCTTCBHHHHHHHSTT--SSCHHHHHHHHHHHHHHHHHHHH-TTEECSCCCGGGEEEEETTEEE
T ss_pred C------CCceEEEEECCCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHh-CCEeccCCCcceEEEcCCCcEE
Confidence 3 23789999999 489999987532 12344466679999999999997 8999999999999999999999
Q ss_pred EEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----
Q 004157 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE---- 245 (771)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~---- 245 (771)
|+|||++.......... ........+..|+|||++.+. .++.++|+|||||++|+|++|..++....
T Consensus 186 L~Dfg~~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~ 256 (326)
T 2w1i_A 186 IGDFGLTKVLPQDKEYY---KVKEPGESPIFWYAPESLTES------KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFM 256 (326)
T ss_dssp ECCCTTCEECCSSCSEE---ECSSCCSCCGGGCCHHHHHHC------EEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHH
T ss_pred EecCcchhhcccccccc---ccccCCCCceeEECchhhcCC------CCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHH
Confidence 99999998765432100 000111223369999998763 45678999999999999999987664220
Q ss_pred -------------------h------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 246 -------------------L------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 246 -------------------l------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
+ .....+|..+.+++.+||+.+|.+||++.++++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~ 316 (326)
T 2w1i_A 257 RMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALR 316 (326)
T ss_dssp HHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred HhhccccchhhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 0 0123567889999999999999999999998763
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.9e-32 Score=287.72 Aligned_cols=240 Identities=14% Similarity=0.178 Sum_probs=179.7
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECC-CCC--cEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKD-DGS--PVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~-~g~--~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~ 92 (771)
..+|++.+.||.|+ | +||+|+++. ++. .|+||++..... .....+.+.+|++.++.++||||+++++++..+
T Consensus 17 ~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~- 93 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFG--VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP- 93 (291)
T ss_dssp GGGEEEEEECC----C--CCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS-
T ss_pred hhHeeeeeeecCCCce--eEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccC-
Confidence 44799999999998 8 899998654 333 689999876432 224567889999999999999999999998753
Q ss_pred cCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEE
Q 004157 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL 170 (771)
.+|+|||++ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||
T Consensus 94 --------~~~~v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dikp~Nili~~~~~~kl 162 (291)
T 1u46_A 94 --------PMKMVTELAPLGSLLDRLRKHQG--HFLLGTLSRYAVQVAEGMGYLES-KRFIHRDLAARNLLLATRDLVKI 162 (291)
T ss_dssp --------SCEEEEECCTTCBHHHHHHHHGG--GSCHHHHHHHHHHHHHHHHHHHH-TTEECSCCCGGGEEEEETTEEEE
T ss_pred --------CceeeEecccCCCHHHHHHhccC--CcCHHHHHHHHHHHHHHHHHHHh-CCcccCCCchheEEEcCCCCEEE
Confidence 379999999 589998876531 12344566779999999999997 89999999999999999999999
Q ss_pred EccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh---
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL--- 246 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l--- 246 (771)
+|||++.......... ........+..|+|||++.+. .++.++|+|||||++|+|++ |..||.....
T Consensus 163 ~Dfg~~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~ 233 (291)
T 1u46_A 163 GDFGLMRALPQNDDHY---VMQEHRKVPFAWCAPESLKTR------TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI 233 (291)
T ss_dssp CCCTTCEECCC-CCEE---EC-----CCGGGCCHHHHHHC------EEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH
T ss_pred ccccccccccccccch---hhhccCCCCceeeCchhhcCC------CCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHH
Confidence 9999998765432110 001111223369999998752 45678999999999999999 8888754211
Q ss_pred -----------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 -----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 -----------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....+|..+.+++.+||..+|.+||++.+++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 278 (291)
T 1u46_A 234 LHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDF 278 (291)
T ss_dssp HHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHccCCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 1124577889999999999999999999998763
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=6.2e-32 Score=298.82 Aligned_cols=242 Identities=16% Similarity=0.184 Sum_probs=178.8
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCC---CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDG---SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g---~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
...|++++.||.|+ | +||+|+.+.++ ..|+||.+.... .....+.+.+|++++++|+||||+++++++...
T Consensus 88 ~~~~~~~~~LG~G~fg--~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~-- 162 (373)
T 3c1x_A 88 SLIVHFNEVIGRGHFG--CVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS-- 162 (373)
T ss_dssp TEEEEEEEEEECCSSS--EEEEEEEEETTTEEEEEEEEECCSCS-CSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCC--
T ss_pred hceeecCcEeeeCCCe--EEEEEEEECCCCcEEEEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcC--
Confidence 34588899999998 8 99999976443 368999886532 334567889999999999999999999986543
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEE
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~ 171 (771)
....|+||||+ ++|.++++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+
T Consensus 163 -----~~~~~lv~e~~~~g~L~~~l~~~~~~--~~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~~~~kL~ 234 (373)
T 3c1x_A 163 -----EGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMKFLAS-KKFVHRDLAARNCMLDEKFTVKVA 234 (373)
T ss_dssp -----SSCCEEEEECCTTCBHHHHHHCTTCC--CBHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEECTTCCEEEC
T ss_pred -----CCCeEEEEECCCCCCHHHHHhhcccC--CCHHHHHHHHHHHHHHHHHHHH-CCEecCccchheEEECCCCCEEEe
Confidence 23679999999 5899999764322 2344456678999999999997 899999999999999999999999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh----
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL---- 246 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l---- 246 (771)
|||+++......... .........+..|+|||++.+ ..++.++|+|||||++|||++ |.+||.....
T Consensus 235 DFG~a~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~ 306 (373)
T 3c1x_A 235 DFGLARDMYDKEFDS--VHNKTGAKLPVKWMALESLQT------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT 306 (373)
T ss_dssp CC-----------------------CCGGGSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHH
T ss_pred ecccccccccccccc--ccccCCCCCcccccChHHhcC------CCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHH
Confidence 999998664321110 000111223347999999876 367789999999999999999 5566643211
Q ss_pred ---------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 ---------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 ---------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....+|..+.+++.+||+.+|.+||++.+++++
T Consensus 307 ~~~~~~~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~ 349 (373)
T 3c1x_A 307 VYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 349 (373)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 1124577889999999999999999999999864
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=5.9e-32 Score=285.12 Aligned_cols=236 Identities=16% Similarity=0.181 Sum_probs=185.6
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
+....|++.+.||.|+ | +||+|+++ ++..|+||++...... .+.+.+|+++++.|+||||+++++++..
T Consensus 10 v~~~~y~~~~~lg~G~~g--~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~---- 79 (279)
T 1qpc_A 10 VPRETLKLVERLGAGQFG--EVWMGYYN-GHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVVTQ---- 79 (279)
T ss_dssp CCGGGEEEEEEEEEETTE--EEEEEEET-TTEEEEEEEECTTSSC---HHHHHHHHHHHHHCCCTTBCCEEEEECS----
T ss_pred cCHHhhhheeeecCCCCe--EEEEEEEc-CCcEEEEEEecCCccc---HHHHHHHHHHHHhCCCcCcceEEEEEcC----
Confidence 3456799999999998 8 99999976 5678999999754322 4568899999999999999999998863
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
..+|+||||+ ++|.+++...... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|
T Consensus 80 -----~~~~~v~e~~~~~~L~~~l~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~-~~i~H~dikp~Nil~~~~~~~kl~D 152 (279)
T 1qpc_A 80 -----EPIYIITEYMENGSLVDFLKTPSGI-KLTINKLLDMAAQIAEGMAFIEE-RNYIHRDLRAANILVSDTLSCKIAD 152 (279)
T ss_dssp -----SSCEEEEECCTTCBHHHHTTSHHHH-TCCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEECTTSCEEECC
T ss_pred -----CCcEEEEecCCCCCHHHHHhcCCCC-CCCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHhhEEEcCCCCEEECC
Confidence 2579999999 5899988653210 12234466679999999999997 8999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh-----
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL----- 246 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l----- 246 (771)
||++.......... ......+..|+|||++.+. .++.++|+|||||++|+|++ |..||.....
T Consensus 153 fg~~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~ 221 (279)
T 1qpc_A 153 FGLARLIEDNEYTA-----REGAKFPIKWTAPEAINYG------TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 221 (279)
T ss_dssp CTTCEECSSSCEEC-----CTTCCCCTTTSCHHHHHHC------EECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHH
T ss_pred CcccccccCccccc-----ccCCCCccCccChhhhccC------CCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHH
Confidence 99998765421110 1112234479999998752 45678999999999999999 7877753211
Q ss_pred --------hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 247 --------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 247 --------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.....+|..+.+++.+||..+|.+||++.++++
T Consensus 222 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 262 (279)
T 1qpc_A 222 NLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRS 262 (279)
T ss_dssp HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHhcccCCCCcccccHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 112467888999999999999999999999875
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=99.97 E-value=5.9e-32 Score=306.66 Aligned_cols=234 Identities=16% Similarity=0.178 Sum_probs=184.9
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
..|++.+.||.|+ | +||+|+++ ++..|+||++..... ..+.+.+|+++|++|+||||+++++++..
T Consensus 188 ~~~~~~~~lG~G~fg--~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~l~~~~~~------- 254 (454)
T 1qcf_A 188 ESLKLEKKLGAGQFG--EVWMATYN-KHTKVAVKTMKPGSM---SVEAFLAEANVMKTLQHDKLVKLHAVVTK------- 254 (454)
T ss_dssp GGEEEEEEEECCSSE--EEEEEEET-TTEEEEEEEECTTSB---CHHHHHHHHHHHTTCCCTTBCCEEEEECS-------
T ss_pred HHeEEEEEcccCCce--EEEEEEEC-CccEEEEEEecCCCc---cHHHHHHHHHHHhhCCCCCEeeEEEEEeC-------
Confidence 4588999999998 8 99999986 477899999975432 35678899999999999999999998863
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+||||||| ++|.++|+...... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 255 --~~~~lv~e~~~~g~L~~~l~~~~~~~-~~~~~~~~~~~qi~~~l~~LH~-~~ivHrDlkp~Nill~~~~~~kl~DFG~ 330 (454)
T 1qcf_A 255 --EPIYIITEFMAKGSLLDFLKSDEGSK-QPLPKLIDFSAQIAEGMAFIEQ-RNYIHRDLRAANILVSASLVCKIADFGL 330 (454)
T ss_dssp --SSCEEEECCCTTCBHHHHHHSHHHHT-CCHHHHHHHHHHHHHHHHHHHH-TTCCCSSCSGGGEEECTTCCEEECSTTG
T ss_pred --CccEEEEeecCCCcHHHHHHhccCCC-CCHHHHHHHHHHHHHHHHHHHh-CCccCCCCCHHHEEECCCCcEEEeeCCC
Confidence 2589999999 58999997542111 1233455669999999999997 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh--------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL-------- 246 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l-------- 246 (771)
++......... ......+..|+|||++.. ..++.++|+|||||++|||++ |..||.....
T Consensus 331 a~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~------~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~ 399 (454)
T 1qcf_A 331 ARVIEDNEYTA-----REGAKFPIKWTAPEAINF------GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE 399 (454)
T ss_dssp GGGBCCHHHHT-----TCSSSSCGGGSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH
T ss_pred ceEcCCCceec-----cCCCcccccccCHHHhcc------CCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 98764321000 011122347999999875 357789999999999999999 8888754211
Q ss_pred -----hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 -----RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 -----~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....+|..+.+++.+||..+|.+||++.++++.
T Consensus 400 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~ 438 (454)
T 1qcf_A 400 RGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSV 438 (454)
T ss_dssp HTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred cCCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 1124577889999999999999999999988753
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-31 Score=301.78 Aligned_cols=242 Identities=15% Similarity=0.237 Sum_probs=175.8
Q ss_pred CCCceecCCCCCCC-CceEE-EEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccC
Q 004157 18 DLPYNIGDPYPSAW-GSWSH-FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENID 94 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtV-y~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d 94 (771)
...|++.+.||.|+ | +| |.+ ..+|+.||||++...... .+.+|+++|+.+ +||||++++++++..
T Consensus 23 ~~~y~~~~~LG~G~~G--~V~~~~--~~~~~~vAvK~~~~~~~~-----~~~~E~~~l~~l~~HpnIv~l~~~~~~~--- 90 (432)
T 3p23_A 23 KISFCPKDVLGHGAEG--TIVYRG--MFDNRDVAVKRILPECFS-----FADREVQLLRESDEHPNVIRYFCTEKDR--- 90 (432)
T ss_dssp TEEEEEEEEEEECGGG--CEEEEE--ESSSSEEEEEEECTTTEE-----ECHHHHHHHHHSCCCTTBCCEEEEEEET---
T ss_pred cEEEecCCeeecCcCE--EEEEEE--EeCCeEEEEEEECHHHHH-----HHHHHHHHHHhccCCCCcCeEEEEEecC---
Confidence 34699999999998 8 54 444 347999999999754322 256799999999 799999999998863
Q ss_pred cCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC---CC--cE
Q 004157 95 ATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ---TL--DW 168 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~---~G--~~ 168 (771)
..+|||||+| ++|.+++........... +..+++||+.||.|||+ .+++||||||+||+++. +| .+
T Consensus 91 -----~~~~lv~E~~~g~L~~~l~~~~~~~~~~~--~~~i~~qi~~aL~~LH~-~~ivHrDlKp~NIll~~~~~~~~~~~ 162 (432)
T 3p23_A 91 -----QFQYIAIELCAATLQEYVEQKDFAHLGLE--PITLLQQTTSGLAHLHS-LNIVHRDLKPHNILISMPNAHGKIKA 162 (432)
T ss_dssp -----TEEEEEEECCSEEHHHHHHSSSCCCCSSC--HHHHHHHHHHHHHHHHH-TTCCCCCCSTTSEEECCCBTTTBCCE
T ss_pred -----CEEEEEEECCCCCHHHHHHhcCCCccchh--HHHHHHHHHHHHHHHHH-CcCEeCCCCHHHEEEecCCCCCceeE
Confidence 4899999999 689999987653222111 23458999999999997 89999999999999953 33 47
Q ss_pred EEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhhh
Q 004157 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR 247 (771)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l~ 247 (771)
||+|||++......... ........++..|+|||++.+.. ...++.++|+|||||++|||++ |..||......
T Consensus 163 kL~DFG~a~~~~~~~~~---~~~~~~~~gt~~y~APE~l~~~~---~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~ 236 (432)
T 3p23_A 163 MISDFGLCKKLAVGRHS---FSRRSGVPGTEGWIAPEMLSEDC---KENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR 236 (432)
T ss_dssp EECCTTEEECC---------------CCSCTTSCCGGGTSCC------CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH
T ss_pred EEecccceeeccCCCcc---eeeccccCCCcCccChhhhhccc---ccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH
Confidence 79999999876542110 01112234566999999987421 1355678999999999999999 77777543211
Q ss_pred c---------cCC------CCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 N---------TAS------IPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 ~---------~~~------IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
. ... .+..+.+++.+||+.+|.+||++.++++| +||.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h-p~f~~ 289 (432)
T 3p23_A 237 QANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH-PFFWS 289 (432)
T ss_dssp HHHHHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS-TTTCC
T ss_pred HHHHHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC-ccccC
Confidence 1 011 12236789999999999999999999999 55644
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.9e-31 Score=298.95 Aligned_cols=240 Identities=13% Similarity=0.074 Sum_probs=188.4
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
..+|++++.||.|+ | +||+|+++.+|+.|+||++....... .+.+|+++++.|+|++++..+..+..+
T Consensus 6 ~~~y~i~~~LG~G~fG--~Vy~a~~~~~~~~vAvK~~~~~~~~~----~~~~E~~il~~L~~~~~i~~i~~~~~~----- 74 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFG--EIYLGTNIQTNEEVAIKLENVKTKHP----QLLYESKIYRILQGGTGIPNVRWFGVE----- 74 (483)
T ss_dssp TTTEECCCCCEECSSC--EEEEEEETTTCCEEEEEEEETTCSSC----CHHHHHHHHHHTTTSTTCCCEEEEEEE-----
T ss_pred CCcEEEEEEEeeCCCE--EEEEEEECCCCcEEEEEEeccccccH----HHHHHHHHHHHhcCCCCCCeEEEEEee-----
Confidence 45799999999998 9 99999999999999999988654433 367899999999986555545444433
Q ss_pred CcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEE---cCCCcEEEEc
Q 004157 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV---TQTLDWKLHA 172 (771)
Q Consensus 97 ~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v---~~~G~~KL~d 172 (771)
....||||||+ ++|.+++..... ......+..++.||+.||.|||+ .+|+||||||+|||| +.++.+||+|
T Consensus 75 --~~~~~lvme~~g~sL~~ll~~~~~--~l~~~~~~~i~~qi~~aL~yLH~-~gIvHrDIKP~NILl~~~~~~~~vkL~D 149 (483)
T 3sv0_A 75 --GDYNVLVMDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIID 149 (483)
T ss_dssp --TTEEEEEEECCCCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEECCGGGTTCEEECC
T ss_pred --CCEEEEEEECCCCCHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHH-CCEeecccCcceEEEecCCCCCeEEEEe
Confidence 34889999999 579999985432 12345567779999999999997 899999999999999 6889999999
Q ss_pred cCcccccCCCCCCCCCCcccc-ccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-----
Q 004157 173 FDVLSEFDGNNEAANGPMLQY-AWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----- 246 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~-~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----- 246 (771)
||++..+.........++... ...++..|+|||++.+ ..++.++|||||||++|||++|..||.....
T Consensus 150 FGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~------~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~ 223 (483)
T 3sv0_A 150 FGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLG------IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQ 223 (483)
T ss_dssp CTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTT------CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHH
T ss_pred CCcceeccCCccccccccccccccCCCccccCHHHhcC------CCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHH
Confidence 999987765322111111111 2344558999999876 3577899999999999999999998854110
Q ss_pred ---------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 247 ---------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 247 ---------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.....+|..+.+++.+||..+|.+||++.++++
T Consensus 224 ~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~ 271 (483)
T 3sv0_A 224 KYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR 271 (483)
T ss_dssp HHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 011578999999999999999999999998865
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=3e-31 Score=286.97 Aligned_cols=235 Identities=13% Similarity=0.156 Sum_probs=173.6
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHH--hcCCCCCeeEEeeeEEecccCcC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRL--RTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~L--k~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
.|++.+.||.|+ | +||+|+++ |+.|+||++.... .....+|.+++ ..++||||+++++++.....+
T Consensus 38 ~y~~~~~lg~G~~g--~V~~~~~~--~~~vavK~~~~~~-----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~-- 106 (337)
T 3mdy_A 38 QIQMVKQIGKGRYG--EVWMGKWR--GEKVAVKVFFTTE-----EASWFRETEIYQTVLMRHENILGFIAADIKGTGS-- 106 (337)
T ss_dssp HCEEEEEEEEETTE--EEEEEEET--TEEEEEEEEEGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGG--
T ss_pred ceEEEeEeecCCCe--EEEEEEEC--CceEEEEEEeccc-----cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCC--
Confidence 699999999998 8 99999886 8999999996431 12233344444 445899999999999865322
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCC--------CceecCCCCCCEEEcCCC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDC--------KLVHGNVCLSSVVVTQTL 166 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~--------~ivH~dIkp~NI~v~~~G 166 (771)
...+|+||||+ ++|.++++...+ ....+..++.||+.||.|||+ . +++||||||+||+++.+|
T Consensus 107 --~~~~~lv~e~~~~g~L~~~l~~~~~----~~~~~~~i~~~i~~~l~~lH~-~~~~~~~~~~ivH~Dikp~Nill~~~~ 179 (337)
T 3mdy_A 107 --WTQLYLITDYHENGSLYDYLKSTTL----DAKSMLKLAYSSVSGLCHLHT-EIFSTQGKPAIAHRDLKSKNILVKKNG 179 (337)
T ss_dssp --GCEEEEEECCCTTCBHHHHHHHCCB----CHHHHHHHHHHHHHHHHHHHS-CBCSTTCBCCEECSCCCGGGEEECTTS
T ss_pred --CCceEEEEeccCCCcHHHHhhccCC----CHHHHHHHHHHHHHHHHHHHH-hhhhhccCCCEEecccchHHEEECCCC
Confidence 25899999999 489999987643 344466679999999999996 6 999999999999999999
Q ss_pred cEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCC------cchHHHHHHHHHHHhhC---
Q 004157 167 DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPW------SIDSWGLGCLIYELFSG--- 237 (771)
Q Consensus 167 ~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~------~~Di~SLG~li~el~~g--- 237 (771)
.+||+|||++.......... ........++..|+|||++.+. .... ++|+|||||++|||++|
T Consensus 180 ~~kl~Dfg~a~~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~------~~~~~~~~~~~~DiwslG~il~el~tg~~~ 251 (337)
T 3mdy_A 180 TCCIADLGLAVKFISDTNEV--DIPPNTRVGTKRYMPPEVLDES------LNRNHFQSYIMADMYSFGLILWEVARRCVS 251 (337)
T ss_dssp CEEECCCTTCEECC-----------CCSSCSCGGGCCHHHHTTC------CCTTCTHHHHHHHHHHHHHHHHHHHTTBCB
T ss_pred CEEEEeCCCceeeccccccc--cCCCCCCccCcceeChhhcccc------cCCccccCccccchHHHHHHHHHHHhccCc
Confidence 99999999997765432111 1111122345589999998763 2222 38999999999999999
Q ss_pred -------CCCCChh--------hhh------c-cC---------CCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 238 -------MRLSKTE--------ELR------N-TA---------SIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 238 -------~~p~~~~--------~l~------~-~~---------~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
..|+... ... . .. .++..+.+++.+||..+|.+||++.+++++
T Consensus 252 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 325 (337)
T 3mdy_A 252 GGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKT 325 (337)
T ss_dssp TTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred ccccccccccHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence 4444221 000 0 01 223458889999999999999999999875
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-31 Score=288.26 Aligned_cols=247 Identities=15% Similarity=0.103 Sum_probs=183.3
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
+...+|++++.||.|+ | +||+|+++. .|+||++..........+.+++|++++++++||||+++++++...
T Consensus 30 i~~~~~~~~~~lg~G~~g--~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--- 101 (319)
T 2y4i_B 30 IPFEQLEIGELIGKGRFG--QVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSP--- 101 (319)
T ss_dssp SCCSCEECCCBCCCSSSS--EEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECS---
T ss_pred CCHHHeEEeeEeccCCce--EEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecC---
Confidence 3456799999999998 8 999998753 599999986544433445577899999999999999999999864
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
..+|+||||+ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++ +|.+||+|
T Consensus 102 -----~~~~iv~e~~~~~~L~~~l~~~~~~--~~~~~~~~i~~qi~~al~~lH~-~~i~H~dlkp~NIl~~-~~~~~l~D 172 (319)
T 2y4i_B 102 -----PHLAIITSLCKGRTLYSVVRDAKIV--LDVNKTRQIAQEIVKGMGYLHA-KGILHKDLKSKNVFYD-NGKVVITD 172 (319)
T ss_dssp -----SCEEEECBCCCSEEHHHHTTSSCCC--CCSHHHHHHHHHHHHHHHHHHH-TTCCCCCCCSTTEEEC---CCEECC
T ss_pred -----CceEEEeecccCCcHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHh-CCccccCCChhhEEEe-CCCEEEee
Confidence 3799999999 4799988764321 2234466779999999999997 8999999999999998 78999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhcccccccc---ccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh--
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTA---VRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-- 247 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~---~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~-- 247 (771)
||++............ .......+...|+|||++.+.... ....++.++|+|||||++|+|++|..||......
T Consensus 173 fg~~~~~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~ 251 (319)
T 2y4i_B 173 FGLFSISGVLQAGRRE-DKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAI 251 (319)
T ss_dssp CSCCC----------C-CSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHH
T ss_pred cCCccccccccccccc-cccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 9998755321111000 001112234479999998652100 0124567899999999999999999888643211
Q ss_pred ------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 ------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 ------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
....+|..+.+++.+||..+|.+||++.++++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~ 296 (319)
T 2y4i_B 252 IWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDM 296 (319)
T ss_dssp HHHHHTTCCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHH
T ss_pred HHHhccCCCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 113578899999999999999999999998864
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.3e-31 Score=285.36 Aligned_cols=250 Identities=16% Similarity=0.189 Sum_probs=178.6
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
+.-.+|++.+.||.|+ | +||+|+. +++.|+||++..... .......++..++.++||||+++++.+.....+
T Consensus 10 ~~~~~y~~~~~lg~G~~g--~Vy~~~~--~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~ 82 (336)
T 3g2f_A 10 LDLDNLKLLELIGRGRYG--AVYKGSL--DERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVGDERVTAD 82 (336)
T ss_dssp CCTTSEEEEEEEEECSSE--EEEEEEE--TTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTT
T ss_pred cChHHhheeeecccCCCe--EEEEEEE--CCeEEEEEEeeccch---hhHHHHHHHHHHHhccCcchhhheecccccccC
Confidence 4455799999999998 8 9999976 689999999975321 122234556666679999999999876543222
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCC---------CceecCCCCCCEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDC---------KLVHGNVCLSSVVVT 163 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~---------~ivH~dIkp~NI~v~ 163 (771)
+ ...+||||||| ++|.++++.... ....+..++.||+.||.|||+ . +++||||||+||+++
T Consensus 83 ~---~~~~~lv~e~~~~g~L~~~l~~~~~----~~~~~~~i~~qi~~~L~~LH~-~~~~~~~~~~~ivH~Dikp~Nill~ 154 (336)
T 3g2f_A 83 G---RMEYLLVMEYYPNGSLXKYLSLHTS----DWVSSCRLAHSVTRGLAYLHT-ELPRGDHYKPAISHRDLNSRNVLVK 154 (336)
T ss_dssp S---CEEEEEEECCCTTCBHHHHHHHCCB----CHHHHHHHHHHHHHHHHHHHC-CBCCGGGCBCCEECSSCSGGGEEEC
T ss_pred C---CceEEEEEecCCCCcHHHHHhhccc----chhHHHHHHHHHHHHHHHHHh-hhccccccccceeecccccceEEEc
Confidence 1 44789999999 489999987654 233355669999999999996 7 999999999999999
Q ss_pred CCCcEEEEccCcccccCCCCCCCCC--CccccccccCCCCCChhccccccccc-cCCCCCcchHHHHHHHHHHHhhCCCC
Q 004157 164 QTLDWKLHAFDVLSEFDGNNEAANG--PMLQYAWLVGAQYKPVELAKSDWTAV-RKSPPWSIDSWGLGCLIYELFSGMRL 240 (771)
Q Consensus 164 ~~G~~KL~dFgla~~~~~~~~~~~~--~~~~~~~~~~~~Y~aPE~~~~~~~~~-~~~~~~~~Di~SLG~li~el~~g~~p 240 (771)
.+|.+||+|||++............ ........++..|+|||++.+..... ...++.++|||||||++|||++|..+
T Consensus 155 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p 234 (336)
T 3g2f_A 155 NDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTD 234 (336)
T ss_dssp TTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGG
T ss_pred CCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCc
Confidence 9999999999999876543211100 01111223455899999987521100 01234579999999999999999643
Q ss_pred C-Chhhh---------------------------hccCCCCc----------chHHHHHHHhccCCCCCCChHHHhhC
Q 004157 241 S-KTEEL---------------------------RNTASIPK----------SLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 241 ~-~~~~l---------------------------~~~~~IP~----------~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
+ ..... .....+|. .+.+++.+||..+|.+||++.++++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~ 312 (336)
T 3g2f_A 235 LFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEER 312 (336)
T ss_dssp GSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred CCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHH
Confidence 3 21110 00122232 58999999999999999999998763
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.1e-31 Score=289.79 Aligned_cols=236 Identities=11% Similarity=0.099 Sum_probs=178.8
Q ss_pred CCCceecCCCCCCC-CceEEEEeE-----ECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC---CCCeeEEeeeE
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGT-----SKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR---HPNILAFLHST 88 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~-----~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr---HPnIlkv~d~~ 88 (771)
...|++.+.||.|+ | +||+|+ +..+++.|+||++.... ...+.+|++.++.|+ ||||+++++++
T Consensus 64 ~~~y~~~~~lG~G~~g--~Vy~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~e~~~~~~l~~~~~~~iv~~~~~~ 136 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFA--QVYEATQGDLNDAKNKQKFVLKVQKPAN-----PWEFYIGTQLMERLKPSMQHMFMKFYSAH 136 (365)
T ss_dssp SSEEEEEEEEEECSSE--EEEEEEC-------CCCCEEEEEESSCC-----HHHHHHHHHHHHHSCGGGGGGBCCEEEEE
T ss_pred CEEEEEEEEeeccCCE--EEEEEEecCCcccccCcEEEEEEeCCCC-----hhHHHHHHHHHHHhhhhhhhhhhhhheee
Confidence 34699999999998 8 999994 66789999999997542 234566777777776 99999999999
Q ss_pred EecccCcCCcccEEEEEecCC--cchHHHHHHhCC--CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC
Q 004157 89 EVENIDATSTKITIYIVTEPV--MPLSEKIKELGL--EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ 164 (771)
Q Consensus 89 e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~--~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~ 164 (771)
... ...||||||| ++|.+++..... ........+..++.||+.||.|||+ ++|+||||||+||+++.
T Consensus 137 ~~~--------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~-~~ivHrDiKp~NIll~~ 207 (365)
T 3e7e_A 137 LFQ--------NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHD-CEIIHGDIKPDNFILGN 207 (365)
T ss_dssp ECS--------SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHT-TTEECCCCSGGGEEECG
T ss_pred ecC--------CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhh-CCeecCCCCHHHEEecc
Confidence 864 3789999999 589999976421 2223445567779999999999996 89999999999999998
Q ss_pred -----------CCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHH
Q 004157 165 -----------TLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYE 233 (771)
Q Consensus 165 -----------~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~e 233 (771)
+|.+||+|||++..+..... ........++..|+|||++.+ ..++.++|+|||||++||
T Consensus 208 ~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~e 277 (365)
T 3e7e_A 208 GFLEQDDEDDLSAGLALIDLGQSIDMKLFPK----GTIFTAKCETSGFQCVEMLSN------KPWNYQIDYFGVAATVYC 277 (365)
T ss_dssp GGTCC------CTTEEECCCTTCEEGGGSCT----TEEECCSSCTTSCCCHHHHTT------CCBSTHHHHHHHHHHHHH
T ss_pred cccCccccccccCCEEEeeCchhhhhhccCC----CceeeeecCCCCCCChHHhcC------CCCCccccHHHHHHHHHH
Confidence 89999999999976542111 011122345569999999876 357789999999999999
Q ss_pred HhhCCCCCChhhhh--------ccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 234 LFSGMRLSKTEELR--------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 234 l~~g~~p~~~~~l~--------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
|++|..||...... .....++.+.+++.+||+.+|..|+...+.+.
T Consensus 278 lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~ 331 (365)
T 3e7e_A 278 MLFGTYMKVKNEGGECKPEGLFRRLPHLDMWNEFFHVMLNIPDCHHLPSLDLLR 331 (365)
T ss_dssp HHHSSCCCEEEETTEEEECSCCTTCSSHHHHHHHHHHHHCCCCTTCCCCHHHHH
T ss_pred HHhCCCccccCCCCceeechhccccCcHHHHHHHHHHHcCCCCCCcchHHHHHH
Confidence 99999887432211 11223456788899999999999976555444
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=278.92 Aligned_cols=216 Identities=19% Similarity=0.259 Sum_probs=173.5
Q ss_pred CCceec-CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHH-hcCCCCCeeEEeeeEEecccCc
Q 004157 19 LPYNIG-DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRL-RTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 19 ~~Y~i~-e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~L-k~LrHPnIlkv~d~~e~e~~d~ 95 (771)
.+|.+. +.||.|+ | +||+|.++.+|+.|+||++... ..+.+|+..+ +.++||||++++++++....+
T Consensus 17 ~~y~~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~-------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~- 86 (299)
T 3m2w_A 17 DDYKVTSQVLGLGING--KVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAG- 86 (299)
T ss_dssp GTEEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT-
T ss_pred cchhhcCcccccCCCe--EEEEEEEcCCCcEEEEEEeccc-------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCC-
Confidence 367776 6799998 8 9999999999999999999742 2466788888 667899999999999762211
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC---CCcEEE
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ---TLDWKL 170 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~---~G~~KL 170 (771)
...+||||||+ ++|.+++...... ......+..++.||+.||.|||+ .+++||||||+||+++. ++.+||
T Consensus 87 ---~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~-~~i~H~dlkp~Nil~~~~~~~~~~kl 161 (299)
T 3m2w_A 87 ---RKCLLIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKL 161 (299)
T ss_dssp ---EEEEEEEECCCCSCBHHHHHHHCTTC-CCBHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEESSSSTTCCEEE
T ss_pred ---CceEEEEEeecCCCcHHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEEecCCCCCcEEE
Confidence 34899999999 4899999875421 23345567779999999999997 89999999999999998 788999
Q ss_pred EccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc--
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN-- 248 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~-- 248 (771)
+|||++..... ..++.++|+|||||++|+|++|..||.......
T Consensus 162 ~Dfg~a~~~~~----------------------------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~ 207 (299)
T 3m2w_A 162 TDFGFAKETTG----------------------------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS 207 (299)
T ss_dssp CCCTTCEECTT----------------------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------
T ss_pred ecccccccccc----------------------------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh
Confidence 99999865432 123357999999999999999998885432100
Q ss_pred ------------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 249 ------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 249 ------------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
...++..+.+++.+||+.+|.+||++.++++| +||
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h-p~~ 260 (299)
T 3m2w_A 208 PGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH-PWI 260 (299)
T ss_dssp CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS-HHH
T ss_pred HHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC-hhh
Confidence 03568889999999999999999999999998 444
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-31 Score=301.24 Aligned_cols=235 Identities=18% Similarity=0.158 Sum_probs=180.8
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
...|++.+.||.|+ | +||+|+++. +..|+||++...... .+.+.+|+++|++|+||||+++++++..
T Consensus 183 ~~~~~~~~~lG~G~fg--~Vy~~~~~~-~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hp~iv~~~~~~~~------ 250 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFG--EVWMGTWNG-TTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSE------ 250 (452)
T ss_dssp GGGEEEEEEEEECSSC--EEEEEEETT-TEEEEEEECCTTSSC---HHHHHHHHHHHHHCCCTTBCCEEEEECS------
T ss_pred hhHceeeeeecCCCCe--EEEEEEECC-CceEEEEEeccCCCC---HHHHHHHHHHHHhCCCCCEeeEEEEEcC------
Confidence 34688999999998 8 999999874 567999998754322 3568899999999999999999998864
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+||||||+ ++|.++|+..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 251 ---~~~~iv~e~~~~gsL~~~l~~~~~~-~~~~~~~~~i~~qi~~~l~~LH~-~~ivHrDlkp~Nill~~~~~~kl~DfG 325 (452)
T 1fmk_A 251 ---EPIYIVTEYMSKGSLLDFLKGETGK-YLRLPQLVDMAAQIASGMAYVER-MNYVHRDLRAANILVGENLVCKVADFG 325 (452)
T ss_dssp ---SSCEEEECCCTTCBHHHHHSHHHHT-TCCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEECGGGCEEECCCC
T ss_pred ---CceEEEehhhcCCCHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHh-CCeeCCCCChhhEEECCCCCEEECCCc
Confidence 2579999999 5899999753211 12233456669999999999997 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh-------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL------- 246 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l------- 246 (771)
+++........ .......+..|+|||++.+ ..++.++|+|||||++|||++ |..||.....
T Consensus 326 ~a~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~------~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i 394 (452)
T 1fmk_A 326 LARLIEDNEYT-----ARQGAKFPIKWTAPEAALY------GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 394 (452)
T ss_dssp TTC-------------------CCGGGSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH
T ss_pred cceecCCCcee-----cccCCcccccccCHhHHhc------CCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 99876532110 0111223347999999876 356789999999999999999 8888754211
Q ss_pred ------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 ------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 ------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....+|..+.+++.+||..+|.+||++.++++.
T Consensus 395 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~ 434 (452)
T 1fmk_A 395 ERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAF 434 (452)
T ss_dssp HTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 1124567789999999999999999999988753
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-31 Score=313.43 Aligned_cols=231 Identities=15% Similarity=0.162 Sum_probs=181.9
Q ss_pred CCCCCC-CceEEEEeEE--CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEE
Q 004157 26 PYPSAW-GSWSHFQGTS--KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITI 102 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~--k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~i 102 (771)
.||.|+ | +||+|.. +.+++.||||++..........+.+.+|+++|++|+||||++++++++.+ .+
T Consensus 376 ~LG~G~fG--~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~---------~~ 444 (635)
T 4fl3_A 376 ELGSGNFG--TVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE---------SW 444 (635)
T ss_dssp EEEECSSE--EEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESS---------SE
T ss_pred EeccCCCE--EEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---------CE
Confidence 689988 8 9999954 45678999999986544445567899999999999999999999998642 57
Q ss_pred EEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccC
Q 004157 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (771)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~ 180 (771)
||||||| ++|.++|+.... .....+..++.||+.||.|||+ .+|+||||||+||+|+.+|.+||+|||+++...
T Consensus 445 ~lv~E~~~~g~L~~~l~~~~~---l~~~~~~~i~~qi~~~L~yLH~-~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~ 520 (635)
T 4fl3_A 445 MLVMEMAELGPLNKYLQQNRH---VKDKNIIELVHQVSMGMKYLEE-SNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 520 (635)
T ss_dssp EEEEECCTTEEHHHHHHHCTT---CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEEEETTEEEECCTTHHHHTT
T ss_pred EEEEEccCCCCHHHHHhhCCC---CCHHHHHHHHHHHHHHHHHHHH-CCEeCCCCChHhEEEeCCCCEEEEEcCCccccc
Confidence 9999999 579999976543 2344466679999999999997 899999999999999999999999999998765
Q ss_pred CCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh-------------
Q 004157 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL------------- 246 (771)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l------------- 246 (771)
....... .......+..|+|||++.+ ..++.++|||||||++|||++ |..||.....
T Consensus 521 ~~~~~~~---~~~~~~~t~~y~APE~~~~------~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~ 591 (635)
T 4fl3_A 521 ADENYYK---AQTHGKWPVKWYAPECINY------YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM 591 (635)
T ss_dssp C----------------CGGGSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC
T ss_pred cCccccc---cccCCCCceeeeChhhhcC------CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC
Confidence 4221100 0111122347999999876 467789999999999999998 8888854321
Q ss_pred hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 ~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....+|..+.+++.+||+.+|.+||++.++++.
T Consensus 592 ~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~ 625 (635)
T 4fl3_A 592 GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELR 625 (635)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 1124577889999999999999999999998763
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-31 Score=312.85 Aligned_cols=247 Identities=16% Similarity=0.182 Sum_probs=188.0
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.+|++.+.||.|+ | +||+|.++.+|+.|+||++... ......+.+.+|++++++|+||||++++++++.... ..
T Consensus 14 grY~i~~~LG~G~fG--~Vyla~~~~tg~~VAVKvi~~~-~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~--~~ 88 (676)
T 3qa8_A 14 GPWEMKERLGTGGFG--YVLRWIHQDTGEQVAIKQCRQE-LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQK--LA 88 (676)
T ss_dssp ---CCCCCCCBCSSS--BCCCCCCTTTTCCEEECCCCSC-CCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCC--CC
T ss_pred CCeEEEEEEeeCCCe--EEEEEEECCCCcEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCceeeeeccccc--cc
Confidence 5799999999998 8 9999999999999999998754 233456778999999999999999999998764110 00
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCc---EEEEc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD---WKLHA 172 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~---~KL~d 172 (771)
.....||||||| ++|.+++.............+..++.||+.||.|||+ .+++||||||+||+++.+|. +||+|
T Consensus 89 ~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs-~gIVHrDLKP~NILl~~~g~~~~vKL~D 167 (676)
T 3qa8_A 89 PNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE-NRIIHRDLKPENIVLQPGPQRLIHKIID 167 (676)
T ss_dssp TTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHH-TTBCCCCCCSTTEEEECCSSSCEEEECS
T ss_pred CCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH-CCCccCCCCHHHeEeecCCCceeEEEcc
Confidence 134789999999 4899999875422222233456679999999999997 89999999999999998776 99999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-------
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE------- 245 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~------- 245 (771)
||++........ .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||....
T Consensus 168 FG~a~~~~~~~~-------~~~~~gt~~Y~APE~l~~------~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~ 234 (676)
T 3qa8_A 168 LGYAKELDQGEL-------CTEFVGTLQYLAPELLEQ------KKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHG 234 (676)
T ss_dssp CCCCCBTTSCCC-------CCCCCSCCTTCSSCSSCC------SCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSST
T ss_pred cccccccccccc-------cccccCCcccCChHHhcc------CCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhh
Confidence 999987654211 112345568999999876 367789999999999999999998874310
Q ss_pred ---------------hhc----------c----CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 246 ---------------LRN----------T----ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 246 ---------------l~~----------~----~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
... . ..++..+.+++.+||..||.+||++.++++| +||+
T Consensus 235 ~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~h-p~F~ 302 (676)
T 3qa8_A 235 KVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNV-GCFQ 302 (676)
T ss_dssp TCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCC-TTHH
T ss_pred hhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcC-HHHH
Confidence 000 0 1134568889999999999999999999988 5553
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.4e-31 Score=309.03 Aligned_cols=235 Identities=16% Similarity=0.145 Sum_probs=181.2
Q ss_pred ceecC-CCCCCC-CceEEEEeEECC--CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 21 YNIGD-PYPSAW-GSWSHFQGTSKD--DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 21 Y~i~e-~ig~G~-g~wtVy~g~~k~--~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
|.+.+ .||.|+ | +||+|..+. ++..||||++..... ....+.+.+|+++|++|+||||++++++++.+
T Consensus 337 ~~~~~~~LG~G~fG--~Vy~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~----- 408 (613)
T 2ozo_A 337 LLIADIELGCGNFG--SVRQGVYRMRKKQIDVAIKVLKQGTE-KADTEEMMREAQIMHQLDNPYIVRLIGVCQAE----- 408 (613)
T ss_dssp EEEEEEEEEECSSS--EEEEEEEECSSCEEEEEEEECCCCCS-STTHHHHHHHHHHHTTCCCTTBCCEEEEEESS-----
T ss_pred eeEcCcEEecCCCc--EEEEEEEecCCCcEEEEEEEcCCCCC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEeccC-----
Confidence 44444 689998 8 999998764 456799999976432 23456788999999999999999999998742
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
.+||||||| ++|.++|..... ......+..++.||+.||.|||+ .+|+||||||+||+|+.+|.+||+|||
T Consensus 409 ----~~~lv~E~~~~g~L~~~l~~~~~--~l~~~~~~~i~~qi~~~L~~LH~-~~iiHrDlkp~NILl~~~~~vkL~DFG 481 (613)
T 2ozo_A 409 ----ALMLVMEMAGGGPLHKFLVGKRE--EIPVSNVAELLHQVSMGMKYLEE-KNFVHRNLAARNVLLVNRHYAKISDFG 481 (613)
T ss_dssp ----SEEEEEECCTTCBHHHHHTTCTT--TSCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEEEETTEEEECCCS
T ss_pred ----CeEEEEEeCCCCcHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHH-CCEEcCcCCHHHEEEcCCCcEEEeecc
Confidence 589999999 579999865421 12344566779999999999997 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh-------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL------- 246 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l------- 246 (771)
+++......... ........+..|+|||++.+ ..++.++|+|||||++|||++ |..||.....
T Consensus 482 la~~~~~~~~~~---~~~~~~~~~~~y~APE~~~~------~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i 552 (613)
T 2ozo_A 482 LSKALGADDSYY---TARSAGKWPLKWYAPECINF------RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFI 552 (613)
T ss_dssp TTTTCC-----------------CCTTSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHH
T ss_pred CcccccCCCcee---eeccCCCCccceeCHhhhcC------CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
Confidence 998764321100 00111122357999999875 367789999999999999998 8888854221
Q ss_pred ------hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 247 ------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 247 ------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.....+|..+.+++.+||..+|.+||++.++++
T Consensus 553 ~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~ 591 (613)
T 2ozo_A 553 EQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQ 591 (613)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHH
T ss_pred HcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 112457888999999999999999999999875
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-30 Score=283.69 Aligned_cols=241 Identities=13% Similarity=0.155 Sum_probs=179.9
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhc--CCCCCeeEEeeeEEecccCcC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRT--VRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~--LrHPnIlkv~d~~e~e~~d~~ 96 (771)
.|++.+.||.|+ | +||+|++ +|+.|+||++... ....+.+|+++++. ++||||+++++++..+...
T Consensus 43 ~y~~~~~lg~G~~g--~Vy~~~~--~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~-- 111 (342)
T 1b6c_B 43 TIVLQESIGKGRFG--EVWRGKW--RGEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGT-- 111 (342)
T ss_dssp HCEEEEEEEEETTE--EEEEEEE--TTEEEEEEEECGG-----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSS--
T ss_pred cEEEEeeecCCCCc--EEEEEEE--cCccEEEEEeCch-----hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCc--
Confidence 699999999998 8 9999998 4899999999642 23456678888877 7899999999999865422
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHH--------cCCCceecCCCCCCEEEcCCC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLN--------NDCKLVHGNVCLSSVVVTQTL 166 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH--------~~~~ivH~dIkp~NI~v~~~G 166 (771)
...+|+||||+ ++|.++++.... ....+..++.||+.||.||| + .+++||||||+||+++.+|
T Consensus 112 --~~~~~lv~e~~~~g~L~~~l~~~~~----~~~~~~~i~~~i~~~l~~lH~~~~~~~~~-~~ivH~Dlkp~NIll~~~~ 184 (342)
T 1b6c_B 112 --WTQLWLVSDYHEHGSLFDYLNRYTV----TVEGMIKLALSTASGLAHLHMEIVGTQGK-PAIAHRDLKSKNILVKKNG 184 (342)
T ss_dssp --CCCEEEEECCCTTCBHHHHHHHCCB----CHHHHHHHHHHHHHHHHHHHCCBCSTTCB-CEEECSCCSGGGEEECTTS
T ss_pred --cceeEEEEeecCCCcHHHHHhccCc----cHHHHHHHHHHHHHHHHHHHHHHhhhccc-CCeeeCCCCHHHEEECCCC
Confidence 24799999999 489999987543 34446667999999999999 5 8999999999999999999
Q ss_pred cEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhC---------
Q 004157 167 DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG--------- 237 (771)
Q Consensus 167 ~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g--------- 237 (771)
.+||+|||++.......... ........++..|+|||++.+........++.++|+|||||++|||++|
T Consensus 185 ~~kL~Dfg~~~~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~ 262 (342)
T 1b6c_B 185 TCCIADLGLAVRHDSATDTI--DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHED 262 (342)
T ss_dssp CEEECCCTTCEEEETTTTEE--EECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCC
T ss_pred CEEEEECCCceecccccccc--ccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccc
Confidence 99999999997665422100 0001122344589999998763111000122579999999999999998
Q ss_pred -CCCCChh--------hhh-------ccCCCC---------cchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 238 -MRLSKTE--------ELR-------NTASIP---------KSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 238 -~~p~~~~--------~l~-------~~~~IP---------~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
..||... .+. ....+| ..+.+++.+||+.+|.+||++.+++++
T Consensus 263 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 330 (342)
T 1b6c_B 263 YQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT 330 (342)
T ss_dssp CCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred cccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence 4455321 110 012333 357789999999999999999999875
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-30 Score=274.88 Aligned_cols=209 Identities=16% Similarity=0.086 Sum_probs=172.8
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
+...+|++.+.||.|+ | +||+|+++.+|+.|+||++...... +...+.+.+|++.++.++||||++++++++.+
T Consensus 28 ~~~~~y~i~~~lg~G~~g--~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~-- 103 (286)
T 3uqc_A 28 IANGRYRLLIFHGGVPPL--QFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTR-- 103 (286)
T ss_dssp ETTTTEEEEEEEEBSTTC--EEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEET--
T ss_pred EecCcEEEEEEEcccCCe--EEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEEC--
Confidence 3456799999999998 8 9999999999999999999875443 34567788999999999999999999999874
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEE
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~ 171 (771)
..+||||||| ++|.++++... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+
T Consensus 104 ------~~~~lv~e~~~g~~L~~~l~~~~-----~~~~~~~i~~ql~~aL~~lH~-~givH~Dikp~NIll~~~g~~kl~ 171 (286)
T 3uqc_A 104 ------AGGLVVAEWIRGGSLQEVADTSP-----SPVGAIRAMQSLAAAADAAHR-AGVALSIDHPSRVRVSIDGDVVLA 171 (286)
T ss_dssp ------TEEEEEEECCCEEEHHHHHTTCC-----CHHHHHHHHHHHHHHHHHHHH-TTCCCCCCSGGGEEEETTSCEEEC
T ss_pred ------CcEEEEEEecCCCCHHHHHhcCC-----ChHHHHHHHHHHHHHHHHHHH-CCCccCCCCcccEEEcCCCCEEEE
Confidence 3899999999 47999985431 222355669999999999997 899999999999999999999998
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh----
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---- 247 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~---- 247 (771)
++++. + .++.++|+|||||++|+|++|..||......
T Consensus 172 ~~~~~--------------------------~-------------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~ 212 (286)
T 3uqc_A 172 YPATM--------------------------P-------------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLA 212 (286)
T ss_dssp SCCCC--------------------------T-------------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSE
T ss_pred ecccc--------------------------C-------------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhH
Confidence 54332 1 1235899999999999999999888643211
Q ss_pred ---------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 ---------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 ---------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
....+|..+.+++.+||+.||..| ++.++++.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~ 259 (286)
T 3uqc_A 213 PAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNL 259 (286)
T ss_dssp ECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHH
T ss_pred HHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHH
Confidence 114578889999999999999999 99998763
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=4.9e-31 Score=305.28 Aligned_cols=235 Identities=18% Similarity=0.158 Sum_probs=184.1
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
...|++.+.||.|+ | +||+|+++. +..|+||++...... .+.+.+|+++|++|+||||+++++++..
T Consensus 266 ~~~~~~~~~lG~G~fg--~Vy~~~~~~-~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~~~~~~~~------ 333 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFG--EVWMGTWNG-TTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSE------ 333 (535)
T ss_dssp GGGEEEEEEEEECSSE--EEEEEEETT-TEEEEEEEECTTSSC---HHHHHHHHHHHHHCCCTTBCCEEEEECS------
T ss_pred hhhhhhheecccCCCe--EEEEEEECC-CceEEEEEeCCCCCC---HHHHHHHHHHHHhCCCCCEeeEEEEEee------
Confidence 34688999999998 8 999999874 567999999864322 3568899999999999999999998864
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+||||||| ++|.++|+..... ......+..++.||+.||.|||+ .+++||||||+||+|+.++.+||+|||
T Consensus 334 ---~~~~lv~e~~~~gsL~~~l~~~~~~-~l~~~~~~~i~~qi~~~L~~LH~-~~ivHrDlkp~NIll~~~~~~kl~DFG 408 (535)
T 2h8h_A 334 ---EPIYIVTEYMSKGSLLDFLKGETGK-YLRLPQLVDMAAQIASGMAYVER-MNYVHRDLRAANILVGENLVCKVADFG 408 (535)
T ss_dssp ---SSCEEEECCCTTEEHHHHHSHHHHT-TCCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEECGGGCEEECCTT
T ss_pred ---ccceEeeehhcCCcHHHHHhhcCCC-CCCHHHHHHHHHHHHHHHHHHHh-CCeeCCCCCHhhEEEcCCCcEEEcccc
Confidence 2579999999 5899999753211 12234456679999999999997 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh-------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL------- 246 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l------- 246 (771)
+++........ .......+..|+|||++.+ ..++.++|||||||++|||++ |..||.....
T Consensus 409 ~a~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~------~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i 477 (535)
T 2h8h_A 409 LARLIEDNEYT-----ARQGAKFPIKWTAPEAALY------GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 477 (535)
T ss_dssp STTTCCCHHHH-----TTCSTTSCGGGSCHHHHHH------CCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHH
T ss_pred cceecCCCcee-----cccCCcCcccccCHHHhcc------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 99866431100 0111122347999999876 356789999999999999999 7877754211
Q ss_pred ------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 ------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 ------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....+|..+.+++.+||..+|.+||++.++++.
T Consensus 478 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~ 517 (535)
T 2h8h_A 478 ERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAF 517 (535)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 1124567889999999999999999999988753
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.5e-31 Score=293.17 Aligned_cols=253 Identities=15% Similarity=0.130 Sum_probs=180.7
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCC-CCe---------eEEeee
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRH-PNI---------LAFLHS 87 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrH-PnI---------lkv~d~ 87 (771)
.|.+++.||.|+ | +||+|+++.+|+.||||++...... ....+.+++|+.+++.|+| +|+ +..++.
T Consensus 79 ~~~~~~~LG~G~fG--~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 79 TLVRGTVLGQEDPY--AYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp EEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred eEEEecccccCCCE--EEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 488899999998 8 9999999999999999999843222 2335678999999999987 221 111111
Q ss_pred EEecc---------cCcCCcccEEEEEecCC-cchHHHHHHhC---C-CCCCcHHHHHHHHHHHHHHHHHHHcCCCceec
Q 004157 88 TEVEN---------IDATSTKITIYIVTEPV-MPLSEKIKELG---L-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHG 153 (771)
Q Consensus 88 ~e~e~---------~d~~~~~~~iyIVtE~v-~~L~~~L~~~~---~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~ 153 (771)
..... .........+|++|+++ ++|.++++... . ........+.+++.||+.||.|||+ .+|+||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~iiHr 235 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH-YGLVHT 235 (413)
T ss_dssp EECCC---------------CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH-TTEECS
T ss_pred cccCCCCccccccCCCccccccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHh-CCcccC
Confidence 11100 00000022578888888 67888875321 1 1111223455667999999999997 899999
Q ss_pred CCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhcccccc---cc-ccCCCCCcchHHHHHH
Q 004157 154 NVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDW---TA-VRKSPPWSIDSWGLGC 229 (771)
Q Consensus 154 dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~---~~-~~~~~~~~~Di~SLG~ 229 (771)
||||+||+++.+|.+||+|||+++..... .....+ ..|+|||++.+.. .. ....++.++|+|||||
T Consensus 236 DiKp~NILl~~~~~~kL~DFG~a~~~~~~---------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGv 305 (413)
T 3dzo_A 236 YLRPVDIVLDQRGGVFLTGFEHLVRDGAS---------AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGL 305 (413)
T ss_dssp CCCGGGEEECTTCCEEECCGGGCEETTEE---------ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHH
T ss_pred CcccceEEEecCCeEEEEeccceeecCCc---------cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHH
Confidence 99999999999999999999998765431 111233 7899999984210 00 1124567999999999
Q ss_pred HHHHHhhCCCCCChhhh--------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 230 LIYELFSGMRLSKTEEL--------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 230 li~el~~g~~p~~~~~l--------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
++|||++|..||..... .....+|..+.+++.+||..+|.+||++.++++| +||+.
T Consensus 306 il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~-~~~~~ 369 (413)
T 3dzo_A 306 AIYWIWCADLPNTDDAALGGSEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMET-PEYEQ 369 (413)
T ss_dssp HHHHHHHSSCCCCTTGGGSCSGGGGSSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS-HHHHH
T ss_pred HHHHHHHCCCCCCCcchhhhHHHHHhhcccCCHHHHHHHHHHccCChhhCcCHHHHHhC-HHHHH
Confidence 99999999999865432 2235789999999999999999999999999997 45543
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-30 Score=304.93 Aligned_cols=236 Identities=16% Similarity=0.178 Sum_probs=185.1
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCC---CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDG---SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g---~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
..|++++.||.|+ | +||+|+++.++ ..|+||++... ..+...+.+.+|+.++++++||||+++++++..
T Consensus 390 ~~y~i~~~LG~G~fG--~Vy~a~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~---- 462 (656)
T 2j0j_A 390 ERIELGRCIGEGQFG--DVHQGIYMSPENPAMAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVITE---- 462 (656)
T ss_dssp GGEEEEEEEECCSSC--CEEEEEECCSSSCCEEEEEEECSST-TCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS----
T ss_pred ccEEEeeEEeeCCCE--EEEEEEEecCCCccEEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec----
Confidence 4688999999998 8 99999987554 46899987653 233456778899999999999999999998843
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
..+||||||+ ++|.++++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|
T Consensus 463 -----~~~~lv~E~~~~g~L~~~l~~~~~~--l~~~~~~~i~~qi~~aL~~LH~-~givHrDikp~NILl~~~~~vkL~D 534 (656)
T 2j0j_A 463 -----NPVWIIMELCTLGELRSFLQVRKFS--LDLASLILYAYQLSTALAYLES-KRFVHRDIAARNVLVSSNDCVKLGD 534 (656)
T ss_dssp -----SSCEEEEECCTTCBHHHHHHHTTTT--CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEEEETTEEEECC
T ss_pred -----CceEEEEEcCCCCcHHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHh-CCccccccchHhEEEeCCCCEEEEe
Confidence 2579999999 5899999875422 2334456669999999999997 8999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh-----
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL----- 246 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l----- 246 (771)
||++........ ........+..|+|||++.+ ..++.++|+|||||++|||++ |.+||.....
T Consensus 535 FG~a~~~~~~~~-----~~~~~~~~t~~y~aPE~~~~------~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~ 603 (656)
T 2j0j_A 535 FGLSRYMEDSTY-----YKASKGKLPIKWMAPESINF------RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG 603 (656)
T ss_dssp CCCCCSCCC---------------CCGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH
T ss_pred cCCCeecCCCcc-----eeccCCCCCcceeCHHHhcC------CCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence 999987654211 11111223347999999875 367789999999999999997 8888754211
Q ss_pred --------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 --------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 --------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....+|..+.+++.+||..+|.+||++.++++.
T Consensus 604 ~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~ 645 (656)
T 2j0j_A 604 RIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ 645 (656)
T ss_dssp HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHcCCCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 1124577889999999999999999999998764
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-29 Score=299.88 Aligned_cols=233 Identities=17% Similarity=0.185 Sum_probs=181.2
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECC-CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKD-DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~-~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
..+|++.+.||.|+ | +||+|+++. +|+.|+||++.... .......+.+|+++|++|+||||++++++++..+..+
T Consensus 79 ~~~y~i~~~lg~G~~g--~Vy~a~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 155 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLG--WIYLALDRNVNGRPVVLKGLVHSG-DAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHG 155 (681)
T ss_dssp TTTEEEEEEEEEETTE--EEEEEEEGGGTTEEEEEEESCSSC-CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTS
T ss_pred CCceEEEEEEeeCCCe--EEEEEEEcCCCCcEEEEEEeCccC-CHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCC
Confidence 35799999999998 8 999999986 78999999987532 3345667889999999999999999999998754211
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
...+||||||| ++|.+++.. . .....+..++.||+.||.|||+ .+|+||||||+||+++.+ .+||+||
T Consensus 156 ---~~~~~lv~E~~~g~~L~~~~~~-~----l~~~~~~~~~~qi~~aL~~lH~-~giiHrDlkp~NIll~~~-~~kl~DF 225 (681)
T 2pzi_A 156 ---DPVGYIVMEYVGGQSLKRSKGQ-K----LPVAEAIAYLLEILPALSYLHS-IGLVYNDLKPENIMLTEE-QLKLIDL 225 (681)
T ss_dssp ---CEEEEEEEECCCCEECC----C-C----CCHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEECSS-CEEECCC
T ss_pred ---CceeEEEEEeCCCCcHHHHHhC-C----CCHHHHHHHHHHHHHHHHHHHH-CCCeecccChHHeEEeCC-cEEEEec
Confidence 12379999999 468776654 2 2344466679999999999997 899999999999999875 8999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhcc----
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT---- 249 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~~---- 249 (771)
|++...... ....++..|+|||++.+. ++.++|||||||++|+|++|.+++.......+
T Consensus 226 G~a~~~~~~----------~~~~gt~~y~aPE~~~~~-------~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~~~~ 288 (681)
T 2pzi_A 226 GAVSRINSF----------GYLYGTPGFQAPEIVRTG-------PTVATDIYTVGRTLAALTLDLPTRNGRYVDGLPEDD 288 (681)
T ss_dssp TTCEETTCC----------SCCCCCTTTSCTTHHHHC-------SCHHHHHHHHHHHHHHHHSCCCEETTEECSSCCTTC
T ss_pred ccchhcccC----------CccCCCccccCHHHHcCC-------CCCceehhhhHHHHHHHHhCCCCCcccccccccccc
Confidence 999876542 112345689999998753 36799999999999999999877654322211
Q ss_pred --CCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 250 --ASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 250 --~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
..++..+.+++.+||..+|.+||+..+.+.+
T Consensus 289 ~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~ 321 (681)
T 2pzi_A 289 PVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSA 321 (681)
T ss_dssp HHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred cccccCHHHHHHHhhhccCChhhCCCHHHHHHH
Confidence 1234668899999999999999987777765
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=99.95 E-value=4.1e-30 Score=279.16 Aligned_cols=233 Identities=12% Similarity=0.076 Sum_probs=171.6
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC------chhHHHHHHHHHHHHhcCC---------CCCee
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA------QDGHLAAARNGVKRLRTVR---------HPNIL 82 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~------~~~~~~~~~~ei~~Lk~Lr---------HPnIl 82 (771)
.+|++.+.||.|+ | +||+|++ +|+.||||++..... .....+.+.+|+++|+.|+ ||||+
T Consensus 20 ~~y~~~~~lG~G~~g--~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv 95 (336)
T 2vuw_A 20 EKLQRCEKIGEGVFG--EVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFI 95 (336)
T ss_dssp HHHHTCEEEEEETTE--EEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBC
T ss_pred ccchheeeecccCce--EEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchh
Confidence 4699999999998 8 9999998 689999999986532 1233467888999998886 66666
Q ss_pred EEeeeE-----------------EecccCc-----CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHH
Q 004157 83 AFLHST-----------------EVENIDA-----TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIA 138 (771)
Q Consensus 83 kv~d~~-----------------e~e~~d~-----~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~ 138 (771)
++++.+ +...... ......+||||||| +++.+.+.+.. .....++.+++||+
T Consensus 96 ~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~----~~~~~~~~i~~qi~ 171 (336)
T 2vuw_A 96 GLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKL----SSLATAKSILHQLT 171 (336)
T ss_dssp CEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTC----CCHHHHHHHHHHHH
T ss_pred hhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcC----CCHHHHHHHHHHHH
Confidence 666554 3210000 00034899999998 44555443322 23455777899999
Q ss_pred HHHHHHH-cCCCceecCCCCCCEEEcCCC--------------------cEEEEccCcccccCCCCCCCCCCcccccccc
Q 004157 139 KAVSFLN-NDCKLVHGNVCLSSVVVTQTL--------------------DWKLHAFDVLSEFDGNNEAANGPMLQYAWLV 197 (771)
Q Consensus 139 ~aL~fLH-~~~~ivH~dIkp~NI~v~~~G--------------------~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~ 197 (771)
.||.||| + .+|+||||||+||+++.+| .+||+|||+++..... ...+
T Consensus 172 ~aL~~lH~~-~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-----------~~~g 239 (336)
T 2vuw_A 172 ASLAVAEAS-LRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-----------IVVF 239 (336)
T ss_dssp HHHHHHHHH-HCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-----------EEEC
T ss_pred HHHHHHHHh-CCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-----------cEEE
Confidence 9999999 7 8999999999999999988 8999999999876531 1244
Q ss_pred CCCCCChhccccccccccCCCCCcchHHHHHHH-HHHHhhCCCCCChhh----h----h-c--c---------CCCCcch
Q 004157 198 GAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCL-IYELFSGMRLSKTEE----L----R-N--T---------ASIPKSL 256 (771)
Q Consensus 198 ~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~l-i~el~~g~~p~~~~~----l----~-~--~---------~~IP~~l 256 (771)
+..|+|||++.+. . +.++||||||+. .++++.|..||.... + . . . ..+++.+
T Consensus 240 t~~y~aPE~~~g~------~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 312 (336)
T 2vuw_A 240 CDVSMDEDLFTGD------G-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKI 312 (336)
T ss_dssp CCCTTCSGGGCCC------S-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHH
T ss_pred eecccChhhhcCC------C-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHH
Confidence 5689999999863 2 578999998777 778888888875421 0 0 0 0 1245678
Q ss_pred HHHHHHHhccCCCCCCChHHHh-hCCCCC
Q 004157 257 LPDYQRLLSSMPSRRLNSSKLI-ENSEYF 284 (771)
Q Consensus 257 ~~~i~~lL~~~P~~Rps~~~lL-~~~~fF 284 (771)
.+++++||..+ |+.++| +| +||
T Consensus 313 ~dli~~~L~~d-----sa~e~l~~H-p~f 335 (336)
T 2vuw_A 313 QEFHRTMLNFS-----SATDLLCQH-SLF 335 (336)
T ss_dssp HHHHHHGGGSS-----SHHHHHHHC-GGG
T ss_pred HHHHHHHhccC-----CHHHHHhcC-CCc
Confidence 89999999976 999999 88 555
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.2e-25 Score=258.02 Aligned_cols=176 Identities=14% Similarity=0.013 Sum_probs=124.6
Q ss_pred EEEEeEECCCCCcEEEEEEeCCCC--------chhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccCcCCcccEEEEE
Q 004157 35 SHFQGTSKDDGSPVSIFSISGTNA--------QDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDATSTKITIYIV 105 (771)
Q Consensus 35 tVy~g~~k~~g~~VaIK~~~~~~~--------~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d~~~~~~~iyIV 105 (771)
.++.+++...|+.|+||++.+... .+...+.+++|+++|+++ .||||++++++++++ ..+|||
T Consensus 249 ~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~--------~~~yLV 320 (569)
T 4azs_A 249 AHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENA--------QSGWLV 320 (569)
T ss_dssp ---CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECS--------SEEEEE
T ss_pred cccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEEC--------CEEEEE
Confidence 555666677899999999986521 124467799999999999 699999999999974 489999
Q ss_pred ecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCCCC
Q 004157 106 TEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNN 183 (771)
Q Consensus 106 tE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~ 183 (771)
|||| ++|.++|+..+... ... ++.||+.||.|||+ .|||||||||+|||++.+|.+||+|||+++......
T Consensus 321 MEyv~G~~L~d~i~~~~~l~---~~~---I~~QIl~AL~ylH~-~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~ 393 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGEEID---REK---ILGSLLRSLAALEK-QGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC 393 (569)
T ss_dssp EECCCSEEHHHHHHTTCCCC---HHH---HHHHHHHHHHHHHH-TTCEESCCCGGGEEECTTSCEEECCCTTEESCC---
T ss_pred EecCCCCcHHHHHHhCCCCC---HHH---HHHHHHHHHHHHHH-CCceeccCchHhEEECCCCCEEEeecccCeeCCCCC
Confidence 9999 57999998865432 222 38999999999997 999999999999999999999999999998765421
Q ss_pred CCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCC
Q 004157 184 EAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM 238 (771)
Q Consensus 184 ~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~ 238 (771)
. .....+++..|++||++.+ .+...+|+|++|+++|++..+.
T Consensus 394 ~------~~~t~vGTp~YmAPE~l~g-------~~~~~~d~~s~g~~~~~l~~~~ 435 (569)
T 4azs_A 394 S------WPTNLVQSFFVFVNELFAE-------NKSWNGFWRSAPVHPFNLPQPW 435 (569)
T ss_dssp C------CSHHHHHHHHHHHHHHC------------------------CCCCTTH
T ss_pred c------cccCceechhhccHHHhCC-------CCCCcccccccccchhhhcccc
Confidence 1 1223345568999999876 3456899999999988876653
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=2.8e-19 Score=206.79 Aligned_cols=183 Identities=12% Similarity=0.007 Sum_probs=127.3
Q ss_pred cCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch------hHHHHHHHHHHHHhcCCCCCee--EEeeeEEecccC
Q 004157 24 GDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD------GHLAAARNGVKRLRTVRHPNIL--AFLHSTEVENID 94 (771)
Q Consensus 24 ~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~------~~~~~~~~ei~~Lk~LrHPnIl--kv~d~~e~e~~d 94 (771)
.+.||+|+ | +||+|+. .+..+++|+...+.... ...+.+++|+++|++|+||||+ .+++. .+
T Consensus 341 ~~~LG~G~fg--~Vy~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~--~~--- 411 (540)
T 3en9_A 341 EHLIGKGAEA--DIKRDSY--LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDV--DL--- 411 (540)
T ss_dssp -------CCE--EEEEEEC--SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEE--ET---
T ss_pred CCEEeeCCCE--EEEEEEE--CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEE--eC---
Confidence 45788888 8 9999943 58899999987543321 1245689999999999999999 55554 22
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
...||||||| ++|.++++. +..++.||+.||.|||+ .+|+||||||+||+++. .+||+|
T Consensus 412 -----~~~~lVmE~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~-~gIiHrDiKp~NILl~~--~~kL~D 472 (540)
T 3en9_A 412 -----DNKRIMMSYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHK-NDVIHNDLTTSNFIFDK--DLYIID 472 (540)
T ss_dssp -----TTTEEEEECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHH-TTEECTTCCTTSEEESS--SEEECC
T ss_pred -----CccEEEEECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHH-CcCccCCCCHHHEEECC--eEEEEE
Confidence 2469999999 579988876 12338999999999997 89999999999999998 999999
Q ss_pred cCcccccCCCCCCCCC-CccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCC
Q 004157 173 FDVLSEFDGNNEAANG-PMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM 238 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~-~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~ 238 (771)
||+++........... ........++..|+|||++.... ..|...+|+|+..+-..+-+.++
T Consensus 473 FGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~----~~Y~~~~d~ws~vl~~l~~v~~r 535 (540)
T 3en9_A 473 FGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFL----EGYKSVYDRWEIILELMKDVERR 535 (540)
T ss_dssp CTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHH----HHHHHHCTTHHHHHHHHHHHHTC
T ss_pred CccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHH----HHHHHHHhHHHHHHHHHHHHHhc
Confidence 9999877542110000 00011234456899999987532 13445679998876666555443
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.5e-18 Score=184.24 Aligned_cols=133 Identities=17% Similarity=0.113 Sum_probs=103.4
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch----------------hHHHHHHHHHHHHhcCCCCCee
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD----------------GHLAAARNGVKRLRTVRHPNIL 82 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~----------------~~~~~~~~ei~~Lk~LrHPnIl 82 (771)
-|.+++.||.|. | .||+|++ .+|+.|+||++....... .....+.+|+++|++|+| +
T Consensus 91 ~~~~~~~iG~G~~g--~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~---~ 164 (282)
T 1zar_A 91 VDAIGKLMGEGKES--AVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG---L 164 (282)
T ss_dssp CSEEEEEEEECSSE--EEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT---S
T ss_pred EEEecCEeccCCCc--eEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC---C
Confidence 366679999998 8 9999999 789999999997432110 135568899999999994 5
Q ss_pred EEeeeEEecccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCE
Q 004157 83 AFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSV 160 (771)
Q Consensus 83 kv~d~~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI 160 (771)
+++++++.. ..|+||||| ++|.+ +.. .. ...++.||+.||.|||+ .+++||||||+||
T Consensus 165 ~v~~~~~~~---------~~~lvmE~~~g~~L~~-l~~-----~~----~~~i~~qi~~~l~~lH~-~giiHrDlkp~NI 224 (282)
T 1zar_A 165 AVPKVYAWE---------GNAVLMELIDAKELYR-VRV-----EN----PDEVLDMILEEVAKFYH-RGIVHGDLSQYNV 224 (282)
T ss_dssp SSCCEEEEE---------TTEEEEECCCCEEGGG-CCC-----SC----HHHHHHHHHHHHHHHHH-TTEECSCCSTTSE
T ss_pred CcCeEEecc---------ceEEEEEecCCCcHHH-cch-----hh----HHHHHHHHHHHHHHHHH-CCCEeCCCCHHHE
Confidence 555555431 469999999 37876 311 11 22349999999999996 9999999999999
Q ss_pred EEcCCCcEEEEccCccccc
Q 004157 161 VVTQTLDWKLHAFDVLSEF 179 (771)
Q Consensus 161 ~v~~~G~~KL~dFgla~~~ 179 (771)
+++ +|.+||+|||+++..
T Consensus 225 Ll~-~~~vkl~DFG~a~~~ 242 (282)
T 1zar_A 225 LVS-EEGIWIIDFPQSVEV 242 (282)
T ss_dssp EEE-TTEEEECCCTTCEET
T ss_pred EEE-CCcEEEEECCCCeEC
Confidence 999 999999999998754
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=1.2e-15 Score=159.44 Aligned_cols=139 Identities=12% Similarity=0.117 Sum_probs=103.7
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCc--EEEEEEeCCCCc----------------------hhHHHHHHHHHHHHh
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSP--VSIFSISGTNAQ----------------------DGHLAAARNGVKRLR 74 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~--VaIK~~~~~~~~----------------------~~~~~~~~~ei~~Lk 74 (771)
-|++++.||.|. | +||+|+++.+|+. ||||++...... ......+.+|++.|+
T Consensus 48 ~~~i~~~ig~G~~g--~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 125 (258)
T 1zth_A 48 ITAMGGVISTGKEA--NVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLE 125 (258)
T ss_dssp EEEEEEEEEECSSE--EEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceE--EEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHH
Confidence 488999999998 8 9999999778999 999998643211 011236789999999
Q ss_pred cCCCCCe--eEEeeeEEecccCcCCcccEEEEEecCCc-------chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHH
Q 004157 75 TVRHPNI--LAFLHSTEVENIDATSTKITIYIVTEPVM-------PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLN 145 (771)
Q Consensus 75 ~LrHPnI--lkv~d~~e~e~~d~~~~~~~iyIVtE~v~-------~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH 145 (771)
+|+|+|| ..+++. . ..|||||||+ .|.+.+.... . ..+..++.||+.+|.|||
T Consensus 126 ~l~~~~i~~p~~~~~--~----------~~~lVmE~~g~~g~~~~~L~~~~~~~~--~----~~~~~i~~qi~~~l~~lH 187 (258)
T 1zth_A 126 RAKEAGVSVPQPYTY--M----------KNVLLMEFIGEDELPAPTLVELGRELK--E----LDVEGIFNDVVENVKRLY 187 (258)
T ss_dssp HHHHTTCCCCCEEEE--E----------TTEEEEECCEETTEECCBHHHHGGGGG--G----SCHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCCCeEEEc--C----------CCEEEEEecCCCCCccccHHHHhhccC--h----HHHHHHHHHHHHHHHHHH
Confidence 9998864 333332 1 3599999994 4655533211 1 113445899999999999
Q ss_pred cCCCceecCCCCCCEEEcCCCcEEEEccCcccccC
Q 004157 146 NDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (771)
Q Consensus 146 ~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~ 180 (771)
..++++||||||+||+++. .++|+|||++....
T Consensus 188 ~~~givHrDlkp~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 188 QEAELVHADLSEYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp HTSCEECSSCSTTSEEESS--SEEECCCTTCEETT
T ss_pred HHCCEEeCCCCHHHEEEcC--cEEEEECcccccCC
Confidence 3399999999999999998 89999999997653
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.36 E-value=1.2e-12 Score=143.66 Aligned_cols=136 Identities=12% Similarity=0.090 Sum_probs=96.9
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC--------c----h----h----HHHHHHHHHHHHhcCCCC
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA--------Q----D----G----HLAAARNGVKRLRTVRHP 79 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~--------~----~----~----~~~~~~~ei~~Lk~LrHP 79 (771)
|+|+.+||.|. | .||.|.+. +|+.||||++..... . . . ..-.+.+|+..|.+|.+.
T Consensus 97 Y~I~~~IG~Gk~a--~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~ 173 (397)
T 4gyi_A 97 YSVGSRIGVGKES--DIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEE 173 (397)
T ss_dssp SEEEEEEEECSSE--EEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEecCEeeeCCce--EEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999998 8 99999985 699999999864210 0 0 0 011245688889998766
Q ss_pred CeeEEeeeEEecccCcCCcccEEEEEecCCc--chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCC
Q 004157 80 NILAFLHSTEVENIDATSTKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCL 157 (771)
Q Consensus 80 nIlkv~d~~e~e~~d~~~~~~~iyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp 157 (771)
++. +...+... ..+||||||. +|..+. ..... ...+.||+.+|.+||. +|+|||||||
T Consensus 174 gv~-vp~p~~~~---------~~~LVME~i~G~~L~~l~------~~~~~---~~l~~qll~~l~~lH~-~gIVHrDLKp 233 (397)
T 4gyi_A 174 GFP-VPEPIAQS---------RHTIVMSLVDALPMRQVS------SVPDP---ASLYADLIALILRLAK-HGLIHGDFNE 233 (397)
T ss_dssp TCS-CCCEEEEE---------TTEEEEECCSCEEGGGCC------CCSCH---HHHHHHHHHHHHHHHH-TTEECSCCST
T ss_pred CCC-CCeeeecc---------CceEEEEecCCccHhhhc------ccHHH---HHHHHHHHHHHHHHHH-CCCcCCCCCH
Confidence 543 33333221 2289999993 554321 11112 2337899999999997 8999999999
Q ss_pred CCEEEcCCCc----------EEEEccCccccc
Q 004157 158 SSVVVTQTLD----------WKLHAFDVLSEF 179 (771)
Q Consensus 158 ~NI~v~~~G~----------~KL~dFgla~~~ 179 (771)
.||+++++|+ ..|+||+-+...
T Consensus 234 ~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 234 FNILIREEKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp TSEEEEEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred HHEEEeCCCCcccccccccceEEEEeCCcccC
Confidence 9999998874 789999977654
|
| >1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A | Back alignment and structure |
|---|
Probab=99.30 E-value=2.2e-11 Score=140.40 Aligned_cols=228 Identities=14% Similarity=0.202 Sum_probs=193.6
Q ss_pred CChhhHHhhhhhchhhhcCCChhhhhhhhHHHHHHHHhcCCC--CchhhHHHHHhccCCChhhhhhhhHHHHHHhhcCCc
Q 004157 301 KDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSA--AAPALTALLKMGSWLSTEEFSVKVLPTIVKLFASND 378 (771)
Q Consensus 301 k~~~eK~~F~~~L~~~l~~fP~~~~~~kILP~Ll~~~~~~~~--~~~~L~~ll~i~~~l~~eef~~~i~P~i~~lF~~~D 378 (771)
.++.-|..-.+.|..+...++.......++|.|...+..... ...++..+-.++..++.+.+...++|.+..++..++
T Consensus 176 ~~~~VR~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~l~~~~~d~~ 255 (588)
T 1b3u_A 176 DTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPQEDLEALVMPTLRQAAEDKS 255 (588)
T ss_dssp SCHHHHHHHHHHHHHHHHTSCHHHHHHTHHHHHHHHHTCSCHHHHTTHHHHHHHHHHHSCHHHHHHHTHHHHHHHHTCSS
T ss_pred CCHHHHHHHHHHHHHHHHHhcHHhHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHccCCC
Confidence 455566777777777777788777778899999988765431 223456667778888888888999999999999999
Q ss_pred HHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChh----HHhHHHHHHHHhhccC
Q 004157 379 RAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQR----TISGSLLKYLSKLQVD 454 (771)
Q Consensus 379 r~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~----~l~~~LL~~laklq~D 454 (771)
+.+|...++.|..+...++++.+...++|.++..+.|.++.||+.++.++..++..++.. .....++|++.++..|
T Consensus 256 ~~vR~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~l~d 335 (588)
T 1b3u_A 256 WRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVSD 335 (588)
T ss_dssp HHHHHHHHHTHHHHHHHHCHHHHHHTHHHHHHHHHTCSSHHHHHHHHHHHHHHHHTSCTTTHHHHHHHTHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHhCcccchhHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhChhhhhhHHHHHHHHHHHHHhcC
Confidence 999999999999999999888888899999999999999999999999999999998876 5577899999999999
Q ss_pred CCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCCcchhhheeee--c---------c--------------C
Q 004157 455 EEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL--S---------Y--------------L 509 (771)
Q Consensus 455 ~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R~a~l~a--~---------~--------------~ 509 (771)
+++.||..++.+|+.|++.++++.....|+|.|. ..|+|+...+|.+++.+ . + +
T Consensus 336 ~~~~vR~~a~~~l~~l~~~~~~~~~~~~l~p~l~-~~l~d~~~~Vr~~a~~~l~~l~~~~~~~~~~~~~lp~l~~~~~d~ 414 (588)
T 1b3u_A 336 ANQHVKSALASVIMGLSPILGKDNTIEHLLPLFL-AQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDA 414 (588)
T ss_dssp SCHHHHHHHHTTGGGGHHHHCHHHHHHHTHHHHH-HHHTCSCHHHHHHHHTTCHHHHHHSCHHHHHHHHHHHHHHHHTCS
T ss_pred CCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHH-HHhCCCchHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999998765667899999 99999999999998877 0 0 5
Q ss_pred CHHHHHHHHHHHHHHHHHHH
Q 004157 510 NCDVRSKAFQAVDQFLQIVK 529 (771)
Q Consensus 510 ~~~VR~~a~~~~~~~l~~l~ 529 (771)
+..||..+..++..+...+.
T Consensus 415 ~~~vr~~~~~~l~~l~~~~~ 434 (588)
T 1b3u_A 415 KWRVRLAIIEYMPLLAGQLG 434 (588)
T ss_dssp SHHHHHHHHHHHHHHHHHHC
T ss_pred CchHHHHHHHHHHHHHHHcC
Confidence 77888888888887766543
|
| >1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A | Back alignment and structure |
|---|
Probab=99.27 E-value=1.9e-11 Score=141.09 Aligned_cols=205 Identities=15% Similarity=0.199 Sum_probs=169.1
Q ss_pred CChhhHHhhhhhchhhhcCCChhhhhhhhHHHHHHHHhcCCC--CchhhHHHHHhccCCChhhhhhhhHHHHHHhhcCCc
Q 004157 301 KDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSA--AAPALTALLKMGSWLSTEEFSVKVLPTIVKLFASND 378 (771)
Q Consensus 301 k~~~eK~~F~~~L~~~l~~fP~~~~~~kILP~Ll~~~~~~~~--~~~~L~~ll~i~~~l~~eef~~~i~P~i~~lF~~~D 378 (771)
.+..-|......|..+...+........++|.|...+..... ...++..+-.++..+..+.+...++|.|..++...+
T Consensus 336 ~~~~vR~~a~~~l~~l~~~~~~~~~~~~l~p~l~~~l~d~~~~Vr~~a~~~l~~l~~~~~~~~~~~~~lp~l~~~~~d~~ 415 (588)
T 1b3u_A 336 ANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAK 415 (588)
T ss_dssp SCHHHHHHHHTTGGGGHHHHCHHHHHHHTHHHHHHHHTCSCHHHHHHHHTTCHHHHHHSCHHHHHHHHHHHHHHHHTCSS
T ss_pred CCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhcCCC
Confidence 334455566666666665566666666789999988875421 112222333444555666777889999999999999
Q ss_pred HHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHHHHHHhhccCCCCc
Q 004157 379 RAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPA 458 (771)
Q Consensus 379 r~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL~~laklq~D~~~~ 458 (771)
+.+|...++.+..+...++.+.+...++|.++..+.|.+..||+.++.++..++..++.......++|.|.++..|++..
T Consensus 416 ~~vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~Vr~~a~~~l~~l~~~~~~~~~~~~llp~l~~~~~~~~~~ 495 (588)
T 1b3u_A 416 WRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYL 495 (588)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHHCHHHHHHHTHHHHHHTTTCSCHH
T ss_pred chHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHhhCCCHH
Confidence 99999999999999999999988889999999999999999999999999999999998877889999999999999999
Q ss_pred chhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCCcchhhheeee
Q 004157 459 IRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 459 IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R~a~l~a 506 (771)
+|..++.|++.|+..++.+.-...++|.+. +.++|+...+|.+++.+
T Consensus 496 ~R~~a~~~l~~l~~~~~~~~~~~~~~~~l~-~~l~d~~~~Vr~~a~~~ 542 (588)
T 1b3u_A 496 HRMTTLFCINVLSEVCGQDITTKHMLPTVL-RMAGDPVANVRFNVAKS 542 (588)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTHHHHH-HGGGCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHH-hhCCCCCchHHHHHHHH
Confidence 999999999999999987655667899999 99999999999988877
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=98.75 E-value=6.1e-08 Score=100.39 Aligned_cols=136 Identities=9% Similarity=0.033 Sum_probs=97.3
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d~~~ 97 (771)
.|++....+.++ + .||++... +..+++|+........ ...+++|++.|+.|. |..+.+++++....
T Consensus 15 ~~~~~~~~~g~s~~--~v~~~~~~--~~~~vlK~~~~~~~~~--~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~------ 82 (263)
T 3tm0_A 15 KYRCVKDTEGMSPA--KVYKLVGE--NENLYLKMTDSRYKGT--TYDVEREKDMMLWLEGKLPVPKVLHFERHD------ 82 (263)
T ss_dssp TSEEEECCSCCSSS--EEEEEECS--SCEEEEEEECGGGTTS--TTCHHHHHHHHHHHTTTSCCCCEEEEEEET------
T ss_pred cceeEeeccCCCCC--eEEEEECC--CCcEEEEeCCcccCCC--HHHHHHHHHHHHHHhcCCCCCeEEEEEecC------
Confidence 388877777665 5 79988743 7899999987421111 124778999999885 66788888887753
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcC----------------------------
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNND---------------------------- 147 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~---------------------------- 147 (771)
...|+|||++ .+|.+.+. .. .....+ +.+++.+|..||.-
T Consensus 83 --~~~~lv~e~i~G~~l~~~~~----~~-~~~~~~---~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (263)
T 3tm0_A 83 --GWSNLLMSEADGVLCSEEYE----DE-QSPEKI---IELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLAD 152 (263)
T ss_dssp --TEEEEEEECCSSEEHHHHCC----TT-TCHHHH---HHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSC
T ss_pred --CceEEEEEecCCeehhhccC----Cc-ccHHHH---HHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccc
Confidence 3789999999 35665421 11 112222 78899999999960
Q ss_pred ------------------------------CCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 148 ------------------------------CKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 148 ------------------------------~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
..++|||+++.||+++.++...|+||+.+.
T Consensus 153 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 153 VDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp CSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 348999999999999876666799999764
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=98.62 E-value=1.9e-07 Score=95.84 Aligned_cols=130 Identities=14% Similarity=0.101 Sum_probs=87.1
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCC--eeEEeeeEEecccCcCC
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPN--ILAFLHSTEVENIDATS 97 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPn--Ilkv~d~~e~e~~d~~~ 97 (771)
|.+....+.|. + .||++.. .+|..|+||+..... ...+.+|+..++.|++.+ +.+++.+....
T Consensus 22 ~~~~~~~~gg~~~--~v~~~~~-~~g~~~vlK~~~~~~-----~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~------ 87 (264)
T 1nd4_A 22 YDWAQQTIGCSDA--AVFRLSA-QGRPVLFVKTDLSGA-----LNELQDEAARLSWLATTGVPCAAVLDVVTEA------ 87 (264)
T ss_dssp CEEEECSCTTSSC--EEEEEEC-TTSCCEEEEEECSCT-----TSCHHHHHHHHHHHHTTTCCBCCEEEEEECS------
T ss_pred CceEecccCCCCc--eEEEEec-CCCCeEEEEeCCccc-----chhhhHHHHHHHHHHhCCCCCCeEEEeccCC------
Confidence 55544333444 5 8999864 467889999976431 134678899999886544 45677776542
Q ss_pred cccEEEEEecCCc--chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcC----------------------------
Q 004157 98 TKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNND---------------------------- 147 (771)
Q Consensus 98 ~~~~iyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~---------------------------- 147 (771)
...|+|||++. +|. . .. .... ..+.+++..|..||.-
T Consensus 88 --~~~~~v~e~i~G~~l~--~---~~---~~~~---~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (264)
T 1nd4_A 88 --GRDWLLLGEVPGQDLL--S---SH---LAPA---EKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVD 154 (264)
T ss_dssp --SCEEEEEECCSSEETT--T---SC---CCHH---HHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCC
T ss_pred --CCCEEEEEecCCcccC--c---Cc---CCHh---HHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCcc
Confidence 26799999993 463 1 10 0111 1256677777777741
Q ss_pred -----------------------------CCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 148 -----------------------------CKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 148 -----------------------------~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
..++|||++|.||+++.++.+.|+|||.+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 155 QDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp TTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred chhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 129999999999999877667799999864
|
| >2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.60 E-value=2.3e-07 Score=95.08 Aligned_cols=161 Identities=12% Similarity=0.176 Sum_probs=77.9
Q ss_pred hhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcC---hhhhhhccHHHHHhhcC-CCcHHHHHHHHHHHHhhccCCChh-
Q 004157 364 VKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFS---AQVVDEQVYPHVATGFA-DTSAFLREMTLKSMLVLAPKLSQR- 438 (771)
Q Consensus 364 ~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~---~~~v~~~I~p~l~~gf~-D~~~~iRe~tlk~i~~l~~kL~~~- 438 (771)
.++-|.+...+.+.+|..|...+..|..+++..+ ...+ .+|++.+...+. |.+..||..+++.+..++..+...
T Consensus 14 ~~l~~~l~~~l~s~~w~~R~~a~~~L~~l~~~~~~~~~~~~-~~i~~~L~~~l~kd~~~~V~~~a~~~l~~la~~l~~~~ 92 (242)
T 2qk2_A 14 SKMPKDFYDKLEEKKWTLRKESLEVLEKLLTDHPKLENGEY-GALVSALKKVITKDSNVVLVAMAGKCLALLAKGLAKRF 92 (242)
T ss_dssp GGSCTTHHHHHTCSSHHHHHHHHHHHHHHHHHCSSBCCCCC-HHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHGGGG
T ss_pred ccCCHHHHhhhccCCHHHHHHHHHHHHHHHccCCCCCCCCH-HHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhhH
Confidence 3333444444445555555555555555444321 1111 234555555552 555555555555555555444332
Q ss_pred -HHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCCcchhhheeee------c----
Q 004157 439 -TISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL------S---- 507 (771)
Q Consensus 439 -~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R~a~l~a------~---- 507 (771)
.....++|.|.+...|..+.||..+..+|..|+..++ .+.|++.+. ..|+|..+.+|..++.. .
T Consensus 93 ~~~~~~ilp~ll~~l~d~~~~vr~~a~~aL~~~~~~~~----~~~ll~~l~-~~l~~~~~~vr~~~l~~l~~~l~~~~~~ 167 (242)
T 2qk2_A 93 SNYASACVPSLLEKFKEKKPNVVTALREAIDAIYASTS----LEAQQESIV-ESLSNKNPSVKSETALFIARALTRTQPT 167 (242)
T ss_dssp HHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTSC----HHHHHHHHH-HHTTCSCHHHHHHHHHHHHHHHTTCCGG
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCC----HHHHHHHHH-HHHcCCChHHHHHHHHHHHHHHHHcCCC
Confidence 2233444555444455555555555555555544432 123444444 45555555555444332 0
Q ss_pred -c------------------CCHHHHHHHHHHHHHHHHHHHH
Q 004157 508 -Y------------------LNCDVRSKAFQAVDQFLQIVKQ 530 (771)
Q Consensus 508 -~------------------~~~~VR~~a~~~~~~~l~~l~~ 530 (771)
+ .++.||..|++++-.+...+..
T Consensus 168 ~~~~~~l~~l~p~l~~~l~D~~~~VR~~A~~~l~~l~~~vg~ 209 (242)
T 2qk2_A 168 ALNKKLLKLLTTSLVKTLNEPDPTVRDSSAEALGTLIKLMGD 209 (242)
T ss_dssp GCCHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHCH
T ss_pred CccHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHcCH
Confidence 0 4566777777777777766653
|
| >2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.41 E-value=1.3e-06 Score=89.39 Aligned_cols=144 Identities=8% Similarity=0.170 Sum_probs=119.7
Q ss_pred CChhhhhhhhHHHHHHhhc-CCcHHHHHHHHHhHHHHHhhcChh--hhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhcc
Q 004157 357 LSTEEFSVKVLPTIVKLFA-SNDRAIRVALLQHIDQYGQSFSAQ--VVDEQVYPHVATGFADTSAFLREMTLKSMLVLAP 433 (771)
Q Consensus 357 l~~eef~~~i~P~i~~lF~-~~Dr~iR~~LL~~l~~~~~~l~~~--~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~ 433 (771)
+...+| ..+++.|.+++. +++..||...+.-+..++..+.+. ..-..|+|.++..|.|.++.||+++..++..++.
T Consensus 49 ~~~~~~-~~i~~~L~~~l~kd~~~~V~~~a~~~l~~la~~l~~~~~~~~~~ilp~ll~~l~d~~~~vr~~a~~aL~~~~~ 127 (242)
T 2qk2_A 49 LENGEY-GALVSALKKVITKDSNVVLVAMAGKCLALLAKGLAKRFSNYASACVPSLLEKFKEKKPNVVTALREAIDAIYA 127 (242)
T ss_dssp BCCCCC-HHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHGGGGHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHT
T ss_pred CCCCCH-HHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 334445 577999999995 999999999999999999888764 3345699999999999999999999999999998
Q ss_pred CCChhHHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcc----hhhHHhHHHHHHhhhcCCCcchhhheeee
Q 004157 434 KLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEG----TRKRVLINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 434 kL~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~----~~~~vL~~af~~~~lkD~f~~~R~a~l~a 506 (771)
.++. ..+++.|.....+..+.||.+++.+|+.++...+.+ ..-..++|.+. ..|.|+...+|.+|..+
T Consensus 128 ~~~~----~~ll~~l~~~l~~~~~~vr~~~l~~l~~~l~~~~~~~~~~~~l~~l~p~l~-~~l~D~~~~VR~~A~~~ 199 (242)
T 2qk2_A 128 STSL----EAQQESIVESLSNKNPSVKSETALFIARALTRTQPTALNKKLLKLLTTSLV-KTLNEPDPTVRDSSAEA 199 (242)
T ss_dssp TSCH----HHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCCGGGCCHHHHHHHHHHHH-HHHTSSCHHHHHHHHHH
T ss_pred cCCH----HHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHH-HHhcCCChHHHHHHHHH
Confidence 8764 457777777777889999999999999987666432 22346799999 99999999999999987
|
| >1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A | Back alignment and structure |
|---|
Probab=98.34 E-value=5.3e-06 Score=92.15 Aligned_cols=201 Identities=12% Similarity=0.095 Sum_probs=147.3
Q ss_pred hhHHHHHHHHhcCCCC----chhhHHHHHhccCC----ChhhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChh
Q 004157 328 KLLPLLASALEFGSAA----APALTALLKMGSWL----STEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQ 399 (771)
Q Consensus 328 kILP~Ll~~~~~~~~~----~~~L~~ll~i~~~l----~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~ 399 (771)
.++|.|+..+...... ..++..+..+...+ ..+.|...+++.+..+....|..+|...++.|..++.+.+..
T Consensus 172 ~ll~~l~~~l~~~~~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~vr~~~~~~l~~l~~~~~~~ 251 (462)
T 1ibr_B 172 EILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQY 251 (462)
T ss_dssp HHHHHHHHHHSTTCCCHHHHHHHHHHHHHHTTTTHHHHTSHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCGGG
T ss_pred HHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4778888777654211 12233332222222 223355667888888888899999999999999998877643
Q ss_pred ---hhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCC--------------------ChhH---HhHHHHHHHHhhcc
Q 004157 400 ---VVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKL--------------------SQRT---ISGSLLKYLSKLQV 453 (771)
Q Consensus 400 ---~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL--------------------~~~~---l~~~LL~~laklq~ 453 (771)
.+...|++.++.++.|.++.||..++..+..++... .... ....++|.|.+...
T Consensus 252 ~~~~~~~~l~~~~~~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~l~~~l~ 331 (462)
T 1ibr_B 252 METYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLT 331 (462)
T ss_dssp CTTTTTTTHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCSSSCSSCCCCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCccchhHHHHHHHhhhccHHHHHHHH
Confidence 233279999999999999999999999888777542 0011 12567777755443
Q ss_pred -------CCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCCcchhhheeee--------c------c----
Q 004157 454 -------DEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL--------S------Y---- 508 (771)
Q Consensus 454 -------D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R~a~l~a--------~------~---- 508 (771)
|.+..+|..++.||+.|+..+++ .....+++.+. ..|+|+.+..|.|++++ . +
T Consensus 332 ~~d~d~~~~~~~~r~~a~~~L~~l~~~~~~-~~~~~~~~~l~-~~l~~~~~~~r~aal~~l~~l~~~~~~~~~~~~l~~~ 409 (462)
T 1ibr_B 332 KQDENDDDDDWNPCKAAGVCLMLLATCCED-DIVPHVLPFIK-EHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQA 409 (462)
T ss_dssp CCCSSCCTTCCSHHHHHHHHHHHHHHHTTT-THHHHHHHHHH-HHTTCSSHHHHHHHHHHHHHTSSSSCTTTTCTTTTTH
T ss_pred hcccccccccchHHHHHHHHHHHHHHhccH-HHHHHHHHHHH-HHhcCCChHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence 23568999999999999999995 44567889998 99999999999999998 1 1
Q ss_pred ----------CCHHHHHHHHHHHHHHHHHHHH
Q 004157 509 ----------LNCDVRSKAFQAVDQFLQIVKQ 530 (771)
Q Consensus 509 ----------~~~~VR~~a~~~~~~~l~~l~~ 530 (771)
++..||..|..++..|.+.+..
T Consensus 410 ~~~l~~~l~d~~~~Vr~~a~~~l~~~~~~~~~ 441 (462)
T 1ibr_B 410 MPTLIELMKDPSVVVRDTAAWTVGRICELLPE 441 (462)
T ss_dssp HHHHHHGGGCSCHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHhccc
Confidence 7899999999999999987744
|
| >3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic} | Back alignment and structure |
|---|
Probab=98.34 E-value=3.4e-06 Score=84.02 Aligned_cols=139 Identities=17% Similarity=0.211 Sum_probs=107.8
Q ss_pred hhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHH
Q 004157 365 KVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSL 444 (771)
Q Consensus 365 ~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~L 444 (771)
..+|.|..++.++|+.+|...+.-|-.+.. ...+|.++..+.|.++.||..++.++..+.. .+.
T Consensus 50 ~~~~~L~~~l~~~~~~vr~~a~~aL~~~~~--------~~~~~~L~~~l~~~~~~vr~~a~~aL~~~~~--------~~~ 113 (211)
T 3ltm_A 50 RAVEPLIKALKDEDAWVRRAAADALGQIGD--------ERAVEPLIKALKDEDGWVRQSAAVALGQIGD--------ERA 113 (211)
T ss_dssp GGHHHHHHHTTCSCHHHHHHHHHHHHHHCC--------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCC--------GGG
T ss_pred cHHHHHHHHHcCCCHHHHHHHHHHHHhhCC--------HHHHHHHHHHHcCCCHHHHHHHHHHHHHhCc--------HHH
Confidence 567888899999999999988887776642 3578899999999999999999999877643 235
Q ss_pred HHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCCcchhhheeee--cc--------------
Q 004157 445 LKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL--SY-------------- 508 (771)
Q Consensus 445 L~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R~a~l~a--~~-------------- 508 (771)
++.|.++..|+++.||..++.+|+++.. .-.++.+. +.|+|+.+.+|.+++.+ .+
T Consensus 114 ~~~L~~~l~d~~~~vr~~a~~aL~~~~~--------~~~~~~L~-~~l~d~~~~vr~~a~~aL~~~~~~~~~~~L~~~l~ 184 (211)
T 3ltm_A 114 VEPLIKALKDEDWFVRIAAAFALGEIGD--------ERAVEPLI-KALKDEDGWVRQSAADALGEIGGERVRAAMEKLAE 184 (211)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHHCC--------GGGHHHHH-HHTTCSSHHHHHHHHHHHHHHCSHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHcCC--------HHHHHHHH-HHHcCCCHHHHHHHHHHHHHhCchhHHHHHHHHHh
Confidence 5667777789999999999999999853 12567777 88999999999999888 11
Q ss_pred -CCHHHHHHHHHHHHHHHHHH
Q 004157 509 -LNCDVRSKAFQAVDQFLQIV 528 (771)
Q Consensus 509 -~~~~VR~~a~~~~~~~l~~l 528 (771)
++..||..|.+++..+-.+-
T Consensus 185 d~~~~vr~~A~~aL~~~~~~~ 205 (211)
T 3ltm_A 185 TGTGFARKVAVNYLETHKSFN 205 (211)
T ss_dssp HCCHHHHHHHHHHHHC-----
T ss_pred CCCHHHHHHHHHHHHhcCCCC
Confidence 77888888888877665443
|
| >3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic} | Back alignment and structure |
|---|
Probab=98.27 E-value=5.2e-06 Score=82.02 Aligned_cols=135 Identities=18% Similarity=0.225 Sum_probs=103.4
Q ss_pred hhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHH
Q 004157 365 KVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSL 444 (771)
Q Consensus 365 ~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~L 444 (771)
..+|.|..++..+|+.+|...+..|-.+.. ...+|.++..+.|.++.||..++.++..+.. .+.
T Consensus 45 ~~~~~L~~~l~~~~~~vr~~a~~~L~~~~~--------~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~--------~~~ 108 (201)
T 3ltj_A 45 RAVEPLIKALKDEDAWVRRAAADALGQIGD--------ERAVEPLIKALKDEDGWVRQSAAVALGQIGD--------ERA 108 (201)
T ss_dssp GGHHHHHHHTTCSSHHHHHHHHHHHHHHCC--------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCC--------GGG
T ss_pred hHHHHHHHHHcCCCHHHHHHHHHHHHhhCC--------HHHHHHHHHHHcCCCHHHHHHHHHHHHHhCc--------HHH
Confidence 457888888888888899888877766532 2477888889999999999999998877643 134
Q ss_pred HHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCCcchhhheeee--cc--------------
Q 004157 445 LKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL--SY-------------- 508 (771)
Q Consensus 445 L~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R~a~l~a--~~-------------- 508 (771)
++.|.++..|+++.||..++.+|+++.. .-.++.+. +.|+|+.+.+|.+++.+ .+
T Consensus 109 ~~~L~~~l~d~~~~vr~~a~~aL~~~~~--------~~~~~~L~-~~l~d~~~~vr~~A~~aL~~~~~~~~~~~L~~~l~ 179 (201)
T 3ltj_A 109 VEPLIKALKDEDWFVRIAAAFALGEIGD--------ERAVEPLI-KALKDEDGWVRQSAADALGEIGGERVRAAMEKLAE 179 (201)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHHTC--------GGGHHHHH-HHTTCSSHHHHHHHHHHHHHHCSHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHhCC--------HHHHHHHH-HHHcCCCHHHHHHHHHHHHHhCchhHHHHHHHHHh
Confidence 5556666678889999999999998863 23567777 88899999999998888 11
Q ss_pred -CCHHHHHHHHHHHHHH
Q 004157 509 -LNCDVRSKAFQAVDQF 524 (771)
Q Consensus 509 -~~~~VR~~a~~~~~~~ 524 (771)
++..||..|.+++..+
T Consensus 180 d~~~~vr~~A~~aL~~l 196 (201)
T 3ltj_A 180 TGTGFARKVAVNYLETH 196 (201)
T ss_dssp HCCHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHH
Confidence 7788888888877654
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=98.20 E-value=3e-06 Score=92.08 Aligned_cols=139 Identities=9% Similarity=0.101 Sum_probs=88.1
Q ss_pred cCCCCCCC-CceEEEEeEECCCCCcEEEEEEe--CCCCchhHHHHHHHHHHHHhcCC--CCCeeEEeeeEEecccCcCCc
Q 004157 24 GDPYPSAW-GSWSHFQGTSKDDGSPVSIFSIS--GTNAQDGHLAAARNGVKRLRTVR--HPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 24 ~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~--~~~~~~~~~~~~~~ei~~Lk~Lr--HPnIlkv~d~~e~e~~d~~~~ 98 (771)
.+.++.|. + .+|..+.. +..+.+|+.. ..... .....+.+|++.++.|+ +..+.+++..+++.+..
T Consensus 43 ~~~l~~G~sn--~~y~v~~~--~~~~vlr~~~~p~~~~~-~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~---- 113 (359)
T 3dxp_A 43 VEQFKGGQSN--PTFKLVTP--GQTYVMRAKPGPKSKLL-PSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVI---- 113 (359)
T ss_dssp EEECCC-CCS--CEEEEECS--SCEEEEECCCC-----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTT----
T ss_pred EEEcCCcccc--eEEEEEEC--CceEEEEeCCCCCCCCC-CcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCcc----
Confidence 34566666 5 78888754 4678888765 22111 11345778999999998 44577888777653211
Q ss_pred ccEEEEEecCCc--chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHc------------------------------
Q 004157 99 KITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNN------------------------------ 146 (771)
Q Consensus 99 ~~~iyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~------------------------------ 146 (771)
...|+|||++. ++.+. .............+.+++..|..||.
T Consensus 114 -g~~~~vme~v~G~~l~~~-----~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (359)
T 3dxp_A 114 -GRAFYIMEFVSGRVLWDQ-----SLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYK 187 (359)
T ss_dssp -SSCEEEEECCCCBCCCCT-----TCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHH
T ss_pred -CCeEEEEEecCCeecCCC-----ccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHH
Confidence 24699999993 34210 00011122223337788888888885
Q ss_pred ---------------------------CCCceecCCCCCCEEEcCCCc--EEEEccCccc
Q 004157 147 ---------------------------DCKLVHGNVCLSSVVVTQTLD--WKLHAFDVLS 177 (771)
Q Consensus 147 ---------------------------~~~ivH~dIkp~NI~v~~~G~--~KL~dFgla~ 177 (771)
...++|||+++.||+++.++. ..|+||+.+.
T Consensus 188 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~ 247 (359)
T 3dxp_A 188 LSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELST 247 (359)
T ss_dssp HHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCE
T ss_pred hcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccc
Confidence 246999999999999998764 6899999875
|
| >2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.17 E-value=1.4e-05 Score=82.62 Aligned_cols=184 Identities=10% Similarity=0.096 Sum_probs=131.8
Q ss_pred hhhhccCChhhHHhhhhhchh-hhcCCChhh----hhhhhHHHHHHHHhcCCC---CchhhHHHHHhccCCC-h--h-hh
Q 004157 295 MEILNLKDSVEKDTFFRKLPN-LAEQLPRQI----VLKKLLPLLASALEFGSA---AAPALTALLKMGSWLS-T--E-EF 362 (771)
Q Consensus 295 L~~l~~k~~~eK~~F~~~L~~-~l~~fP~~~----~~~kILP~Ll~~~~~~~~---~~~~L~~ll~i~~~l~-~--e-ef 362 (771)
.+.+..++-.||..-+..|.. .+..-|.-. -...++..|.+.+..... ...++..+-.+++.+. . + .|
T Consensus 22 ~~~l~s~~w~eRk~al~~L~~~~~~~~~~i~~~~~~~~~~~~~L~~~l~~D~n~~v~~~A~~al~~la~~l~~~~f~~~y 101 (249)
T 2qk1_A 22 QERITSSKWKDRVEALEEFWDSVLSQTKKLKSTSQNYSNLLGIYGHIIQKDANIQAVALAAQSVELICDKLKTPGFSKDY 101 (249)
T ss_dssp HHHHTCSSHHHHHHHHHHHHHHTGGGCCCBCCTTCCCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHCTTTSCHHH
T ss_pred HHHhhcCCHHHHHHHHHHHHHHHHhcCCccccCcccHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHhcccccccHHH
Confidence 334445555566555555555 543322111 113567777777733322 2233444445555554 2 3 57
Q ss_pred hhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhh---hhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCCh--
Q 004157 363 SVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVV---DEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQ-- 437 (771)
Q Consensus 363 ~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v---~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~-- 437 (771)
...++|.|+..|+.....||-.+..-+..+++.+++... .+.+++.++.+++..++.+|++++..|..++..-..
T Consensus 102 ~~~llp~ll~~l~dkk~~V~~aa~~al~~i~~~~~~~~~~~~l~~ll~~l~~~l~~k~~~vk~~al~~l~~~~~~~~~~~ 181 (249)
T 2qk1_A 102 VSLVFTPLLDRTKEKKPSVIEAIRKALLTICKYYDPLASSGRNEDMLKDILEHMKHKTPQIRMECTQLFNASMKEEKDGY 181 (249)
T ss_dssp HHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHSCTTCTTCTTHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCCSCS
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHccccccCCcHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCcc
Confidence 777899999999988888988888888889998865432 346999999999999999999999999999977663
Q ss_pred hH---Hh-HHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcch
Q 004157 438 RT---IS-GSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGT 478 (771)
Q Consensus 438 ~~---l~-~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~ 478 (771)
.. .. ..|+|.|.++-.|+++.||..++-||+.|+..+++..
T Consensus 182 ~~l~~~l~~~iip~l~~~l~D~~~~VR~aA~~~l~~i~~~vG~~~ 226 (249)
T 2qk1_A 182 STLQRYLKDEVVPIVIQIVNDTQPAIRTIGFESFAILIKIFGMNT 226 (249)
T ss_dssp HHHHHHHTTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCSGG
T ss_pred hhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCHHH
Confidence 22 23 6789999999999999999999999999999999754
|
| >4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B* | Back alignment and structure |
|---|
Probab=98.16 E-value=9.5e-06 Score=98.37 Aligned_cols=205 Identities=14% Similarity=0.126 Sum_probs=151.3
Q ss_pred cCChhhHHhhhhhchhhhcCCChhhhhh--hhHHHHHHHHhcCCC--CchhhHHHHHhccCCCh----hhhhhhhHHHHH
Q 004157 300 LKDSVEKDTFFRKLPNLAEQLPRQIVLK--KLLPLLASALEFGSA--AAPALTALLKMGSWLST----EEFSVKVLPTIV 371 (771)
Q Consensus 300 ~k~~~eK~~F~~~L~~~l~~fP~~~~~~--kILP~Ll~~~~~~~~--~~~~L~~ll~i~~~l~~----eef~~~i~P~i~ 371 (771)
-.++.-|...++.|..+....|..+..+ .+++.+++.+..... ...++.-+..+++.... ..|...++|.+.
T Consensus 226 d~~~~vr~~a~~~L~~l~~~~~~~~~~~l~~l~~~l~~~~~~~~~~vr~~a~e~l~~l~~~~~~~~~~~~~~~~l~p~ll 305 (852)
T 4fdd_A 226 DEEPEVRKNVCRALVMLLEVRMDRLLPHMHNIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDVLVRHLPKLIPVLV 305 (852)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCHHHHGGGHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHTTSTTHHHHHTTTHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHH
Confidence 3555667777777777777666554432 577777777664321 11233334455543221 235556778887
Q ss_pred Hhh-----------cC-----------CcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHH
Q 004157 372 KLF-----------AS-----------NDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSML 429 (771)
Q Consensus 372 ~lF-----------~~-----------~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~ 429 (771)
+.. .. .++.+|....+.|..+...+++. +-..++|.+...+.|.+..+|++++.++-
T Consensus 306 ~~l~~~e~d~~~~~~d~~ed~~~dd~~~~~~vr~~a~~~L~~la~~~~~~-~~~~l~~~l~~~l~~~~~~~R~aa~~alg 384 (852)
T 4fdd_A 306 NGMKYSDIDIILLKGDVEGGSGGDDTISDWNLRKCSAAALDVLANVYRDE-LLPHILPLLKELLFHHEWVVKESGILVLG 384 (852)
T ss_dssp HHTSCCHHHHHHHHC------------CCCCHHHHHHHHHHHHHHHHGGG-GHHHHHHHHHHHHTCSSHHHHHHHHHHHH
T ss_pred HHcCCcHhHHHHhcCCcccccccccccccchHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 776 23 45678999999999999988854 55579999999999999999999999999
Q ss_pred hhccCCChh--HHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcc---hhhHHhHHHHHHhhhcCCCcchhhhee
Q 004157 430 VLAPKLSQR--TISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEG---TRKRVLINAFTVRALRDTFSPARGAAK 504 (771)
Q Consensus 430 ~l~~kL~~~--~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~---~~~~vL~~af~~~~lkD~f~~~R~a~l 504 (771)
.++...++. .....++|.|.++..|+.+.||..++-|||+++..+... .-..-+++.+. +.|+|+.+.+|.++.
T Consensus 385 ~i~~~~~~~~~~~l~~~l~~l~~~l~d~~~~Vr~~a~~~l~~l~~~~~~~~~~~~~~~ll~~L~-~~L~d~~~~vr~~a~ 463 (852)
T 4fdd_A 385 AIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTELL-KRILDSNKRVQEAAC 463 (852)
T ss_dssp HTTTTTHHHHGGGHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTHHHHHHSCTTTTHHHHHHHHH-HHHTCSSHHHHHHHH
T ss_pred HHHhcchHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHH-HHHhCCCHHHHHHHH
Confidence 999877653 245789999999999999999999999999999988643 22345678888 899999999999998
Q ss_pred ee
Q 004157 505 IL 506 (771)
Q Consensus 505 ~a 506 (771)
.+
T Consensus 464 ~a 465 (852)
T 4fdd_A 464 SA 465 (852)
T ss_dssp HH
T ss_pred HH
Confidence 88
|
| >3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic} | Back alignment and structure |
|---|
Probab=98.12 E-value=1.5e-05 Score=79.27 Aligned_cols=136 Identities=19% Similarity=0.229 Sum_probs=112.4
Q ss_pred hhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHH
Q 004157 364 VKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGS 443 (771)
Q Consensus 364 ~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~ 443 (771)
...++.++.++.++|+.+|...+..|-.+.. ...+|.++..+.|.++.||..++..+..+.. .+
T Consensus 18 ~~~~~~L~~~L~~~~~~vR~~A~~~L~~~~~--------~~~~~~L~~~l~~~~~~vr~~a~~aL~~~~~--------~~ 81 (211)
T 3ltm_A 18 PEKVEMYIKNLQDDSYYVRRAAAYALGKIGD--------ERAVEPLIKALKDEDAWVRRAAADALGQIGD--------ER 81 (211)
T ss_dssp GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCC--------GGGHHHHHHHTTCSCHHHHHHHHHHHHHHCC--------GG
T ss_pred HhHHHHHHHHHcCCCHHHHHHHHHHHHHhCC--------ccHHHHHHHHHcCCCHHHHHHHHHHHHhhCC--------HH
Confidence 4467889999999999999999988877643 3688999999999999999999999987753 23
Q ss_pred HHHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCCcchhhheeee--cc-------------
Q 004157 444 LLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL--SY------------- 508 (771)
Q Consensus 444 LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R~a~l~a--~~------------- 508 (771)
.++.|.++..|+++.||..++.+|+++.. .-.++.+. +.|+|+.+.+|.+++.+ .+
T Consensus 82 ~~~~L~~~l~~~~~~vr~~a~~aL~~~~~--------~~~~~~L~-~~l~d~~~~vr~~a~~aL~~~~~~~~~~~L~~~l 152 (211)
T 3ltm_A 82 AVEPLIKALKDEDGWVRQSAAVALGQIGD--------ERAVEPLI-KALKDEDWFVRIAAAFALGEIGDERAVEPLIKAL 152 (211)
T ss_dssp GHHHHHHHTTCSSHHHHHHHHHHHHHHCC--------GGGHHHHH-HHTTCSSHHHHHHHHHHHHHHCCGGGHHHHHHHT
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhCc--------HHHHHHHH-HHHhCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 45666666689999999999999999864 12467788 89999999999999998 11
Q ss_pred --CCHHHHHHHHHHHHHH
Q 004157 509 --LNCDVRSKAFQAVDQF 524 (771)
Q Consensus 509 --~~~~VR~~a~~~~~~~ 524 (771)
++..||..|..++..+
T Consensus 153 ~d~~~~vr~~a~~aL~~~ 170 (211)
T 3ltm_A 153 KDEDGWVRQSAADALGEI 170 (211)
T ss_dssp TCSSHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHh
Confidence 7889999999988655
|
| >3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic} | Back alignment and structure |
|---|
Probab=98.12 E-value=1.5e-05 Score=78.67 Aligned_cols=140 Identities=19% Similarity=0.225 Sum_probs=114.4
Q ss_pred hhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhH
Q 004157 360 EEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRT 439 (771)
Q Consensus 360 eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~ 439 (771)
..|.....+.++.++.++|+.+|...+..|-.+.. ...+|.++..+.|.++.+|..++..+..+...
T Consensus 9 ~~~~~~~~~~~i~~L~~~~~~vr~~A~~~L~~~~~--------~~~~~~L~~~l~~~~~~vr~~a~~~L~~~~~~----- 75 (201)
T 3ltj_A 9 HHTDPEKVEMYIKNLQDDSYYVRRAAAYALGKIGD--------ERAVEPLIKALKDEDAWVRRAAADALGQIGDE----- 75 (201)
T ss_dssp CCCCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHCC--------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCCG-----
T ss_pred cccCCcchHHHHHHhcCCCHHHHHHHHHHHHhcCC--------hhHHHHHHHHHcCCCHHHHHHHHHHHHhhCCH-----
Confidence 34556678899999999999999999988876543 35789999999999999999999999776531
Q ss_pred HhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCCcchhhheeee--cc---------
Q 004157 440 ISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL--SY--------- 508 (771)
Q Consensus 440 l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R~a~l~a--~~--------- 508 (771)
+.++.|.++..|+++.||..++.+|+++.. .-.++.+. +.|+|+.+.+|.+++.+ .+
T Consensus 76 ---~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~--------~~~~~~L~-~~l~d~~~~vr~~a~~aL~~~~~~~~~~~L 143 (201)
T 3ltj_A 76 ---RAVEPLIKALKDEDGWVRQSAAVALGQIGD--------ERAVEPLI-KALKDEDWFVRIAAAFALGEIGDERAVEPL 143 (201)
T ss_dssp ---GGHHHHHHHTTCSSHHHHHHHHHHHHHHCC--------GGGHHHHH-HHTTCSSHHHHHHHHHHHHHHTCGGGHHHH
T ss_pred ---HHHHHHHHHHcCCCHHHHHHHHHHHHHhCc--------HHHHHHHH-HHHcCCCHHHHHHHHHHHHHhCCHHHHHHH
Confidence 345666667789999999999999999864 12567777 89999999999999988 11
Q ss_pred ------CCHHHHHHHHHHHHHH
Q 004157 509 ------LNCDVRSKAFQAVDQF 524 (771)
Q Consensus 509 ------~~~~VR~~a~~~~~~~ 524 (771)
++..||..|..++..+
T Consensus 144 ~~~l~d~~~~vr~~A~~aL~~~ 165 (201)
T 3ltj_A 144 IKALKDEDGWVRQSAADALGEI 165 (201)
T ss_dssp HHHTTCSSHHHHHHHHHHHHHH
T ss_pred HHHHcCCCHHHHHHHHHHHHHh
Confidence 7889999999888654
|
| >4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B* | Back alignment and structure |
|---|
Probab=98.10 E-value=3.6e-05 Score=93.29 Aligned_cols=165 Identities=11% Similarity=0.060 Sum_probs=128.2
Q ss_pred hhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhh--hhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhH--
Q 004157 364 VKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQV--VDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRT-- 439 (771)
Q Consensus 364 ~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~--v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~-- 439 (771)
..++|.+.++..+.|..+|...++.|..+++..+... .-+.|++.++.++.|.++.||..++..+..++..-..+.
T Consensus 214 ~~~l~~l~~~~~d~~~~vr~~a~~~L~~l~~~~~~~~~~~l~~l~~~l~~~~~~~~~~vr~~a~e~l~~l~~~~~~~~~~ 293 (852)
T 4fdd_A 214 DSFIENLFALAGDEEPEVRKNVCRALVMLLEVRMDRLLPHMHNIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDVL 293 (852)
T ss_dssp HHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHCHHHHGGGHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHTTSTTHHHHH
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHhcchhHHHHH
Confidence 3577888888888999999999999988887665431 123589999999999999999999999988876432211
Q ss_pred --HhHHHHHHHHhhc-----------cC-----------CCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCC
Q 004157 440 --ISGSLLKYLSKLQ-----------VD-----------EEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDT 495 (771)
Q Consensus 440 --l~~~LL~~laklq-----------~D-----------~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~ 495 (771)
....|+|.+.+.- .| .+..||..++-||+.++..+++.. ...+++.+. ..|+|+
T Consensus 294 ~~~~~~l~p~ll~~l~~~e~d~~~~~~d~~ed~~~dd~~~~~~vr~~a~~~L~~la~~~~~~~-~~~l~~~l~-~~l~~~ 371 (852)
T 4fdd_A 294 VRHLPKLIPVLVNGMKYSDIDIILLKGDVEGGSGGDDTISDWNLRKCSAAALDVLANVYRDEL-LPHILPLLK-ELLFHH 371 (852)
T ss_dssp TTTHHHHHHHHHHHTSCCHHHHHHHHC------------CCCCHHHHHHHHHHHHHHHHGGGG-HHHHHHHHH-HHHTCS
T ss_pred HHHHHHHHHHHHHHcCCcHhHHHHhcCCcccccccccccccchHHHHHHHHHHHHHHhccHHH-HHHHHHHHH-HHhcCC
Confidence 2346677765543 34 345789999999999999998544 456789999 899999
Q ss_pred Ccchhhheeee-----c--------c--------------CCHHHHHHHHHHHHHHHHHHHH
Q 004157 496 FSPARGAAKIL-----S--------Y--------------LNCDVRSKAFQAVDQFLQIVKQ 530 (771)
Q Consensus 496 f~~~R~a~l~a-----~--------~--------------~~~~VR~~a~~~~~~~l~~l~~ 530 (771)
.+..|.+|+++ . | ++..||..|..++..|.+.+..
T Consensus 372 ~~~~R~aa~~alg~i~~~~~~~~~~~l~~~l~~l~~~l~d~~~~Vr~~a~~~l~~l~~~~~~ 433 (852)
T 4fdd_A 372 EWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVS 433 (852)
T ss_dssp SHHHHHHHHHHHHHTTTTTHHHHGGGHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 99999999988 1 1 7889999999999887776543
|
| >1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A | Back alignment and structure |
|---|
Probab=98.09 E-value=1.3e-05 Score=101.15 Aligned_cols=250 Identities=9% Similarity=0.072 Sum_probs=163.6
Q ss_pred cchHHHHHHHhccCCCCCCChHHHhhC---CCCCcc---hhhhhhh-hhhhhccCChhhHHhhhhhchhhhcCCChhhhh
Q 004157 254 KSLLPDYQRLLSSMPSRRLNSSKLIEN---SEYFQN---KLVDTIH-FMEILNLKDSVEKDTFFRKLPNLAEQLPRQIVL 326 (771)
Q Consensus 254 ~~l~~~i~~lL~~~P~~Rps~~~lL~~---~~fF~n---~lv~~~~-~L~~l~~k~~~eK~~F~~~L~~~l~~fP~~~~~ 326 (771)
..+..++.+|.+.|+..|-.+.+-|.+ ..++.. ..-..+. .++.+.-++...|..-...|..+...+++. ..
T Consensus 6 ~~l~~lL~~l~s~d~~~R~~A~~~L~~~l~~~~~~~~~~~~~~il~~Ll~~L~d~~~~vR~~A~~~L~~l~~~~~~~-~~ 84 (1230)
T 1u6g_C 6 YHISNLLEKMTSSDKDFRFMATNDLMTELQKDSIKLDDDSERKVVKMILKLLEDKNGEVQNLAVKCLGPLVSKVKEY-QV 84 (1230)
T ss_dssp HHHHHHHHHTTCSSHHHHHHHHHHHHHHTSSSCCSCCTTHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHTTSCHH-HH
T ss_pred hHHHHHHHhcCCCCHhHHHHHHHHHHHHHcccccCCChhHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhCCHH-HH
Confidence 345556666666666666644322221 011110 0111122 223344455566666666677777777763 34
Q ss_pred hhhHHHHHHHHhcCCCC--chhhHHHHHhccCCChh--------hhhhhhHHHHHHhhc-CCcHHHHHHHHHhHHHHHhh
Q 004157 327 KKLLPLLASALEFGSAA--APALTALLKMGSWLSTE--------EFSVKVLPTIVKLFA-SNDRAIRVALLQHIDQYGQS 395 (771)
Q Consensus 327 ~kILP~Ll~~~~~~~~~--~~~L~~ll~i~~~l~~e--------ef~~~i~P~i~~lF~-~~Dr~iR~~LL~~l~~~~~~ 395 (771)
..|++.|+..+...... ..+...+-.|+..+..+ .|...++|.+...+. ..+..+|...|+.|..+++.
T Consensus 85 ~~i~~~Ll~~l~d~~~~vR~~a~~~L~~i~~~l~~~~~~~~~~~~~~~~llp~L~~~l~~~~~~~~~~~al~~l~~~~~~ 164 (1230)
T 1u6g_C 85 ETIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPASSGSALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLSR 164 (1230)
T ss_dssp HHHHHHHHHHTTCSSSHHHHHHHHHHHHHHHHCC-----CCTHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhCCCcccccchHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHH
Confidence 56889998887644321 12233344555555543 477889999999998 58889999999999888866
Q ss_pred cChhh--hhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHHHHHH-hhccCCCCcchhhHHHHHHHhhh
Q 004157 396 FSAQV--VDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLS-KLQVDEEPAIRTNTTILLGNIAS 472 (771)
Q Consensus 396 l~~~~--v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL~~la-klq~D~~~~IRtnt~icl~kia~ 472 (771)
+++.. +.+.+++.++..|.|.++.||+.+++++..++..+++..+. .+++.|. .+..+.+..+|..++.|++.|+.
T Consensus 165 ~~~~l~~~~~~ll~~l~~~L~~~~~~vR~~a~~al~~l~~~~~~~~~~-~~l~~l~~~L~~~~~~~~r~~a~~~l~~l~~ 243 (1230)
T 1u6g_C 165 QGGLLVNFHPSILTCLLPQLTSPRLAVRKRTIIALGHLVMSCGNIVFV-DLIEHLLSELSKNDSMSTTRTYIQCIAAISR 243 (1230)
T ss_dssp TCSSCTTTHHHHHHHHGGGGGCSSHHHHHHHHHHHHHHTTTC----CT-THHHHHHHHHHHTCSSCSCTTHHHHHHHHHH
T ss_pred hHhHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhcCHHHHH-HHHHHHHHHhccCCchhHHHHHHHHHHHHHH
Confidence 55422 34679999999999999999999999999999998876533 3444443 34445557899999999999999
Q ss_pred ccCcchh--hHHhHHHHHHhhhcCCCcchhhheeee
Q 004157 473 HLNEGTR--KRVLINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 473 ~L~~~~~--~~vL~~af~~~~lkD~f~~~R~a~l~a 506 (771)
..++.-. ..-|++.+. +.+.|....+|.+++.+
T Consensus 244 ~~~~~~~~~l~~l~~~ll-~~l~d~~~~vR~~a~~~ 278 (1230)
T 1u6g_C 244 QAGHRIGEYLEKIIPLVV-KFCNVDDDELREYCIQA 278 (1230)
T ss_dssp HSSGGGTTSCTTHHHHHH-HHHSSCCTTTHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHH-HHhcCCCHHHHHHHHHH
Confidence 8876322 345789998 89999988888877765
|
| >4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene} | Back alignment and structure |
|---|
Probab=98.04 E-value=3.7e-05 Score=77.79 Aligned_cols=141 Identities=16% Similarity=0.179 Sum_probs=99.5
Q ss_pred hhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhh---cChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCCh---
Q 004157 364 VKVLPTIVKLFASNDRAIRVALLQHIDQYGQS---FSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQ--- 437 (771)
Q Consensus 364 ~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~---l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~--- 437 (771)
..++|.+++++...+..+|...+.-|..+... .-...+...++|.++..+.+.++.+|+.++..+..++..-.+
T Consensus 43 ~g~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~l~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~ 122 (252)
T 4hxt_A 43 AGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIK 122 (252)
T ss_dssp TTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred CCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHH
Confidence 34678888888888888887777666666543 223344556788888888888888888888888888753222
Q ss_pred hHHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHH----hHHHHHHhhhcCCCcchhhheeee
Q 004157 438 RTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRV----LINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 438 ~~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~v----L~~af~~~~lkD~f~~~R~a~l~a 506 (771)
..+....++.|.++..++++.+|.+++-||+.|+..-. ..+..+ .++.+. ..|+++...+|..++.+
T Consensus 123 ~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~-~~~~~~~~~~~i~~L~-~ll~~~~~~v~~~a~~~ 193 (252)
T 4hxt_A 123 AIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPD-EAIKAIVDAGGVEVLV-KLLTSTDSEVQKEAARA 193 (252)
T ss_dssp HHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCH-HHHHHHHHTTHHHHHH-HHTTCSCHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCH-HHHHHHHHCcCHHHHH-HHHCCCCHHHHHHHHHH
Confidence 22344567778777778888888888888888886522 222222 477777 78888888888887777
|
| >1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A | Back alignment and structure |
|---|
Probab=98.04 E-value=2.8e-05 Score=86.30 Aligned_cols=141 Identities=10% Similarity=0.081 Sum_probs=108.6
Q ss_pred hhhHHHHHHhhcCC--cHHHHHHHHHhHHHHHhhcChh---hhhhccHHHHHhhcCCC--cHHHHHHHHHHHHhhccCCC
Q 004157 364 VKVLPTIVKLFASN--DRAIRVALLQHIDQYGQSFSAQ---VVDEQVYPHVATGFADT--SAFLREMTLKSMLVLAPKLS 436 (771)
Q Consensus 364 ~~i~P~i~~lF~~~--Dr~iR~~LL~~l~~~~~~l~~~---~v~~~I~p~l~~gf~D~--~~~iRe~tlk~i~~l~~kL~ 436 (771)
..++|.|..++.+. |..+|...|.-|..+.+.+..+ .+-+.|++.++.++.|. ++.||.++++++..+++.+.
T Consensus 127 ~~ll~~L~~~l~~~~~~~~~r~~al~~l~~l~~~~~~~~~~~~~~~ll~~l~~~l~~~~~~~~vr~~a~~~l~~~~~~~~ 206 (462)
T 1ibr_B 127 PELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTK 206 (462)
T ss_dssp TTHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHSCGGGTGGGHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHTTTTH
T ss_pred HHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHhCCchhhHhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 56899999999888 9999999999998888876433 23356899999999999 79999999999998887665
Q ss_pred hhH----HhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcch--hhH-HhHHHHHHhhhcCCCcchhhheee
Q 004157 437 QRT----ISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGT--RKR-VLINAFTVRALRDTFSPARGAAKI 505 (771)
Q Consensus 437 ~~~----l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~--~~~-vL~~af~~~~lkD~f~~~R~a~l~ 505 (771)
... ..+.+++.|..+..|+++.||...+-||+.|+....+.- ... .+++.+. ..++|....+|..++.
T Consensus 207 ~~~~~~~~~~~l~~~l~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~v~~~a~~ 281 (462)
T 1ibr_B 207 ANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITI-EAMKSDIDEVALQGIE 281 (462)
T ss_dssp HHHTSHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCGGGCTTTTTTTHHHHHH-HHHHCSSHHHHHHHHH
T ss_pred HhhhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCchHHHHHHHH
Confidence 322 234578888888888899999999999999997765421 122 4577776 7788876665555443
|
| >1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A | Back alignment and structure |
|---|
Probab=98.00 E-value=7.8e-05 Score=94.02 Aligned_cols=232 Identities=15% Similarity=0.107 Sum_probs=157.0
Q ss_pred hhhhhhhccCChhhHHhhhhhchhhhcC----CChhhhhhhhHHHHHHHHhcCCC--CchhhHHHHHhccCCChhhhhhh
Q 004157 292 IHFMEILNLKDSVEKDTFFRKLPNLAEQ----LPRQIVLKKLLPLLASALEFGSA--AAPALTALLKMGSWLSTEEFSVK 365 (771)
Q Consensus 292 ~~~L~~l~~k~~~eK~~F~~~L~~~l~~----fP~~~~~~kILP~Ll~~~~~~~~--~~~~L~~ll~i~~~l~~eef~~~ 365 (771)
...|+.+...|++.|..=...|.+.+.. +. .....++++.|++.+..... ...++..+-.+++.++. ++...
T Consensus 9 ~~lL~~l~s~d~~~R~~A~~~L~~~l~~~~~~~~-~~~~~~il~~Ll~~L~d~~~~vR~~A~~~L~~l~~~~~~-~~~~~ 86 (1230)
T 1u6g_C 9 SNLLEKMTSSDKDFRFMATNDLMTELQKDSIKLD-DDSERKVVKMILKLLEDKNGEVQNLAVKCLGPLVSKVKE-YQVET 86 (1230)
T ss_dssp HHHHHHTTCSSHHHHHHHHHHHHHHTSSSCCSCC-TTHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHTTSCH-HHHHH
T ss_pred HHHHHhcCCCCHhHHHHHHHHHHHHHcccccCCC-hhHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhCCH-HHHHH
Confidence 3455555556666665444444433321 11 12345788889888763321 11233344455566655 66778
Q ss_pred hHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChh--------hhhhccHHHHHhhcCC-CcHHHHHHHHHHHHhhccCCC
Q 004157 366 VLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQ--------VVDEQVYPHVATGFAD-TSAFLREMTLKSMLVLAPKLS 436 (771)
Q Consensus 366 i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~--------~v~~~I~p~l~~gf~D-~~~~iRe~tlk~i~~l~~kL~ 436 (771)
|++.|...+.+.+..+|...+.-+..++..+... ..-..++|.++.++.| .+..+|+.++..+..++...+
T Consensus 87 i~~~Ll~~l~d~~~~vR~~a~~~L~~i~~~l~~~~~~~~~~~~~~~~llp~L~~~l~~~~~~~~~~~al~~l~~~~~~~~ 166 (1230)
T 1u6g_C 87 IVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPASSGSALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLSRQG 166 (1230)
T ss_dssp HHHHHHHHTTCSSSHHHHHHHHHHHHHHHHCC-----CCTHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHhCCCcccccchHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhH
Confidence 9999999998888999999999999999999875 2566799999999995 889999999999998884332
Q ss_pred hh--HHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCC-cchhhheeee-------
Q 004157 437 QR--TISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTF-SPARGAAKIL------- 506 (771)
Q Consensus 437 ~~--~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f-~~~R~a~l~a------- 506 (771)
.. .....+++.|.....|+++.||..++.||+.++..++...... +++.+. ..|++.. ...|.+++.+
T Consensus 167 ~~l~~~~~~ll~~l~~~L~~~~~~vR~~a~~al~~l~~~~~~~~~~~-~l~~l~-~~L~~~~~~~~r~~a~~~l~~l~~~ 244 (1230)
T 1u6g_C 167 GLLVNFHPSILTCLLPQLTSPRLAVRKRTIIALGHLVMSCGNIVFVD-LIEHLL-SELSKNDSMSTTRTYIQCIAAISRQ 244 (1230)
T ss_dssp SSCTTTHHHHHHHHGGGGGCSSHHHHHHHHHHHHHHTTTC----CTT-HHHHHH-HHHHHTCSSCSCTTHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhcCHHHHHH-HHHHHH-HHhccCCchhHHHHHHHHHHHHHHH
Confidence 21 1247788888888889999999999999999999998765333 455555 5565442 4566666555
Q ss_pred ------cc--------------CCHHHHHHHHHHHHHHHHH
Q 004157 507 ------SY--------------LNCDVRSKAFQAVDQFLQI 527 (771)
Q Consensus 507 ------~~--------------~~~~VR~~a~~~~~~~l~~ 527 (771)
.| .+..||..|..++..+...
T Consensus 245 ~~~~~~~~l~~l~~~ll~~l~d~~~~vR~~a~~~l~~l~~~ 285 (1230)
T 1u6g_C 245 AGHRIGEYLEKIIPLVVKFCNVDDDELREYCIQAFESFVRR 285 (1230)
T ss_dssp SSGGGTTSCTTHHHHHHHHHSSCCTTTHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 11 5677888888777766653
|
| >2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A | Back alignment and structure |
|---|
Probab=98.00 E-value=7e-05 Score=90.14 Aligned_cols=202 Identities=11% Similarity=0.115 Sum_probs=144.0
Q ss_pred hhhhHHHHHHHHhcCCCC----chhhHHHHHhccCC----ChhhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcC
Q 004157 326 LKKLLPLLASALEFGSAA----APALTALLKMGSWL----STEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFS 397 (771)
Q Consensus 326 ~~kILP~Ll~~~~~~~~~----~~~L~~ll~i~~~l----~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~ 397 (771)
...|+|.|...+...... ..++..+..+...+ ..+.+...+++.|..+....++.+|...++.|..++...+
T Consensus 177 ~~~ll~~l~~~l~~~~~~~~vr~~al~~l~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~r~~a~~~l~~l~~~~~ 256 (861)
T 2bpt_A 177 SNNILIAIVQGAQSTETSKAVRLAALNALADSLIFIKNNMEREGERNYLMQVVCEATQAEDIEVQAAAFGCLCKIMSKYY 256 (861)
T ss_dssp HHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHGGGCHHHHTSHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHccChhHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 445777777776654211 12222222222212 2222345688888888888999999999999988888766
Q ss_pred hh---hhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCCh-------------------hHHhHHHHHHHHhhcc--
Q 004157 398 AQ---VVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQ-------------------RTISGSLLKYLSKLQV-- 453 (771)
Q Consensus 398 ~~---~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~-------------------~~l~~~LL~~laklq~-- 453 (771)
.. .+...|++.+..++.|.+..+|..++..+..++..... +.....++|.|-..-.
T Consensus 257 ~~~~~~l~~~l~~~~~~~~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~ll~~l~~~ 336 (861)
T 2bpt_A 257 TFMKPYMEQALYALTIATMKSPNDKVASMTVEFWSTICEEEIDIAYELAQFPQSPLQSYNFALSSIKDVVPNLLNLLTRQ 336 (861)
T ss_dssp GGCHHHHHHTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSCCCCCHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 43 23337899999999999999999999988877765321 1223567777755433
Q ss_pred -----CCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCCcchhhheeee--------c------c------
Q 004157 454 -----DEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL--------S------Y------ 508 (771)
Q Consensus 454 -----D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R~a~l~a--------~------~------ 508 (771)
|++..+|..+.-||+.++..++... ...+++.+. ..|.|+.+..|.+|+.+ . |
T Consensus 337 ~~d~~d~~~~~r~~a~~~L~~l~~~~~~~~-~~~l~~~l~-~~l~~~~~~~r~~a~~~l~~i~~~~~~~~~~~~l~~il~ 414 (861)
T 2bpt_A 337 NEDPEDDDWNVSMSAGACLQLFAQNCGNHI-LEPVLEFVE-QNITADNWRNREAAVMAFGSIMDGPDKVQRTYYVHQALP 414 (861)
T ss_dssp CCC-CCCCCHHHHHHHHHHHHHHHHHGGGG-HHHHHHHHH-HHTTCSSHHHHHHHHHHHHHTSSSSCHHHHHHHHHHHHH
T ss_pred ccccccccCcHHHHHHHHHHHHHHHccHhH-HHHHHHHHH-HHcCCCChhHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 2346899999999999999998544 456788888 89999999999999887 1 1
Q ss_pred --------CCHHHHHHHHHHHHHHHHHHH
Q 004157 509 --------LNCDVRSKAFQAVDQFLQIVK 529 (771)
Q Consensus 509 --------~~~~VR~~a~~~~~~~l~~l~ 529 (771)
++..||..|..++..|...+.
T Consensus 415 ~l~~~l~d~~~~vr~~a~~~l~~l~~~~~ 443 (861)
T 2bpt_A 415 SILNLMNDQSLQVKETTAWCIGRIADSVA 443 (861)
T ss_dssp HHHHGGGCSCHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHcCCCcHHHHHHHHHHHHHHHHHhh
Confidence 678899998888877776654
|
| >2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A | Back alignment and structure |
|---|
Probab=97.97 E-value=5.1e-05 Score=91.37 Aligned_cols=142 Identities=15% Similarity=0.175 Sum_probs=114.0
Q ss_pred hhhhhHHHHHHhhcCC-------cHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccC
Q 004157 362 FSVKVLPTIVKLFASN-------DRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPK 434 (771)
Q Consensus 362 f~~~i~P~i~~lF~~~-------Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~k 434 (771)
+...++|.+...+... ++.+|....+-|..+...++.. +-..++|.+...+.|.+..+|++++..+-.++..
T Consensus 321 ~~~~il~~ll~~l~~~~~d~~d~~~~~r~~a~~~L~~l~~~~~~~-~~~~l~~~l~~~l~~~~~~~r~~a~~~l~~i~~~ 399 (861)
T 2bpt_A 321 SIKDVVPNLLNLLTRQNEDPEDDDWNVSMSAGACLQLFAQNCGNH-ILEPVLEFVEQNITADNWRNREAAVMAFGSIMDG 399 (861)
T ss_dssp HHHHHHHHHHHHTTCCCCC-CCCCCHHHHHHHHHHHHHHHHHGGG-GHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSS
T ss_pred HHHHHHHHHHHHHHhcccccccccCcHHHHHHHHHHHHHHHccHh-HHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHcC
Confidence 3466888888877642 3689999999999999988854 4557999999999999999999999999999987
Q ss_pred CChhH---HhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcc----hhhHHhHHHHHHhhhcCCCcchhhheeee
Q 004157 435 LSQRT---ISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEG----TRKRVLINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 435 L~~~~---l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~----~~~~vL~~af~~~~lkD~f~~~R~a~l~a 506 (771)
..... ....+++.|.+...|+.+.||..++.|||+++..+... .....+++.+. +.|+|+ +.+|.++..+
T Consensus 400 ~~~~~~~~~l~~il~~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~~l~~l~-~~l~~~-~~v~~~a~~a 476 (861)
T 2bpt_A 400 PDKVQRTYYVHQALPSILNLMNDQSLQVKETTAWCIGRIADSVAESIDPQQHLPGVVQACL-IGLQDH-PKVATNCSWT 476 (861)
T ss_dssp SCHHHHHHHHHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHGGGSCTTTTHHHHHHHHH-HHHTSC-HHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHH-HHhccC-hHHHHHHHHH
Confidence 76332 24568888888889999999999999999999988642 23455688888 899998 7888776544
|
| >4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A | Back alignment and structure |
|---|
Probab=97.95 E-value=3.6e-05 Score=76.19 Aligned_cols=143 Identities=19% Similarity=0.161 Sum_probs=108.4
Q ss_pred hhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcC---hhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCCh-
Q 004157 362 FSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFS---AQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQ- 437 (771)
Q Consensus 362 f~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~---~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~- 437 (771)
+.....|.+.+++.+.|..+|...+..|..+...-+ ...+...++|.++..+.+.++.+|+.++..+-.++..-.+
T Consensus 9 ~~~~~~~~l~~LL~s~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~ 88 (210)
T 4db6_A 9 HHGSELPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQ 88 (210)
T ss_dssp ----CHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHH
T ss_pred cccchhHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcHH
Confidence 445568889999999999999888888877764322 3355667899999999999999999999999888743322
Q ss_pred --hHHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHH----hHHHHHHhhhcCCCcchhhheeee
Q 004157 438 --RTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRV----LINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 438 --~~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~v----L~~af~~~~lkD~f~~~R~a~l~a 506 (771)
..+....++.|-++..++++.+|.+++-+|+.|+..-. +.+..+ +++.+. +.|+++...+|..++.+
T Consensus 89 ~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~-~~~~~~~~~~~i~~L~-~ll~~~~~~v~~~a~~a 161 (210)
T 4db6_A 89 IQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGN-EQIQAVIDAGALPALV-QLLSSPNEQILQEALWA 161 (210)
T ss_dssp HHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCH-HHHHHHHHTTHHHHHH-HHTTCSCHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHcCCH-HHHHHHHHcCcHHHHH-HHHcCCCHHHHHHHHHH
Confidence 23345578888888888899999999999999986422 222222 478888 89999999999988887
|
| >2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A | Back alignment and structure |
|---|
Probab=97.90 E-value=0.00015 Score=80.11 Aligned_cols=204 Identities=14% Similarity=0.110 Sum_probs=146.6
Q ss_pred hhhhHHHHHHHHhcCCC---CchhhHHHHHhccCC---ChhhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcC--
Q 004157 326 LKKLLPLLASALEFGSA---AAPALTALLKMGSWL---STEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFS-- 397 (771)
Q Consensus 326 ~~kILP~Ll~~~~~~~~---~~~~L~~ll~i~~~l---~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~-- 397 (771)
...++|.|++.+..... ...++..+-.++... ....+...++|.|..++...|..+|...+.-|..+....+
T Consensus 147 ~~~~i~~L~~~l~~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~ 226 (450)
T 2jdq_A 147 DCNILPPLLQLFSKQNRLTMTRNAVWALSNLCRGKSPPPEFAKVSPCLNVLSWLLFVSDTDVLADACWALSYLSDGPNDK 226 (450)
T ss_dssp HTTCHHHHHHHTTSCCCHHHHHHHHHHHHHHHCCSSSCCCGGGTGGGHHHHHHHTTCCCHHHHHHHHHHHHHHTSSSHHH
T ss_pred HCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHCCCcHH
Confidence 34578888887764211 112333344444332 2234457789999999999999998887777777765432
Q ss_pred -hhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChh---HHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhc
Q 004157 398 -AQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQR---TISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASH 473 (771)
Q Consensus 398 -~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~---~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~ 473 (771)
...+...++|.++..+.+.++.+|+.++..+..++..-+.. .+...+++.|.++..++++.||..++.+|+.|+..
T Consensus 227 ~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~ll~~~~~~vr~~a~~~L~~l~~~ 306 (450)
T 2jdq_A 227 IQAVIDAGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQTQVILNCSALQSLLHLLSSPKESIKKEACWTISNITAG 306 (450)
T ss_dssp HHHHHHTTTHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHTTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHcCcHHHHHHHHCCCchhHHHHHHHHHHHHhhCChHHHHHHHHCccHHHHHHHHcCCCHHHHHHHHHHHHHHHcC
Confidence 23445679999999999999999999999999888754432 23446889998888888999999999999999863
Q ss_pred cCcchhh----HHhHHHHHHhhhcCCCcchhhheeee------c-------c----------------CCHHHHHHHHHH
Q 004157 474 LNEGTRK----RVLINAFTVRALRDTFSPARGAAKIL------S-------Y----------------LNCDVRSKAFQA 520 (771)
Q Consensus 474 L~~~~~~----~vL~~af~~~~lkD~f~~~R~a~l~a------~-------~----------------~~~~VR~~a~~~ 520 (771)
-.. .+. .-+++.+. ..|+|+...+|.+++.+ . + .+..||..|..+
T Consensus 307 ~~~-~~~~~~~~~~l~~L~-~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~a~~a 384 (450)
T 2jdq_A 307 NRA-QIQTVIDANIFPALI-SILQTAEFRTRKEAAWAITNATSGGSAEQIKYLVELGCIKPLCDLLTVMDSKIVQVALNG 384 (450)
T ss_dssp CHH-HHHHHHHTTHHHHHH-HHHHHSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTCHHHHHHGGGSSCHHHHHHHHHH
T ss_pred CHH-HHHHHHHCCCHHHHH-HHHhcCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHCCCHHHHHHHhcCCCHHHHHHHHHH
Confidence 221 222 23577888 89999999999887766 0 0 678999999999
Q ss_pred HHHHHHHHHHH
Q 004157 521 VDQFLQIVKQY 531 (771)
Q Consensus 521 ~~~~l~~l~~~ 531 (771)
+..++..-+..
T Consensus 385 L~~l~~~~~~~ 395 (450)
T 2jdq_A 385 LENILRLGEQE 395 (450)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHhchhh
Confidence 98888765543
|
| >4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} | Back alignment and structure |
|---|
Probab=97.85 E-value=8.6e-05 Score=75.58 Aligned_cols=181 Identities=18% Similarity=0.195 Sum_probs=126.0
Q ss_pred hhhhhhHHHHHHHHhcCCCC--chhhHHHHHhccCCCh--hh-hhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcCh
Q 004157 324 IVLKKLLPLLASALEFGSAA--APALTALLKMGSWLST--EE-FSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSA 398 (771)
Q Consensus 324 ~~~~kILP~Ll~~~~~~~~~--~~~L~~ll~i~~~l~~--ee-f~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~ 398 (771)
+....++|.|++.+...... ..++..+-.++..-+. +. ...-++|.|+.++...+..+|...+.-|..+...-..
T Consensus 50 ~~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~ 129 (252)
T 4db8_A 50 VIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNE 129 (252)
T ss_dssp HHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHH
T ss_pred HHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHhhcCCch
Confidence 45556889999888765411 1122222233321111 11 2234789999999999999998877777776654432
Q ss_pred ---hhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChh---HHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhh
Q 004157 399 ---QVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQR---TISGSLLKYLSKLQVDEEPAIRTNTTILLGNIAS 472 (771)
Q Consensus 399 ---~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~---~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~ 472 (771)
..+...++|.++..+.+.++.+|+.++..+..++..-.+. .+...+++.|..+..++++.||.+++-+|+.|+.
T Consensus 130 ~~~~~~~~~~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~ 209 (252)
T 4db8_A 130 QIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIAS 209 (252)
T ss_dssp HHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHGGGCSSHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHhc
Confidence 3556679999999999999999999999999998644332 2346678889888888899999999999999985
Q ss_pred ccCcchhhHH----hHHHHHHhhhcCCCcchhhheeee
Q 004157 473 HLNEGTRKRV----LINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 473 ~L~~~~~~~v----L~~af~~~~lkD~f~~~R~a~l~a 506 (771)
. +...+..+ .++.+. +.|+++...+|..|+.+
T Consensus 210 ~-~~~~~~~~~~~g~i~~L~-~ll~~~~~~v~~~A~~~ 245 (252)
T 4db8_A 210 G-GNEQKQAVKEAGALEKLE-QLQSHENEKIQKEAQEA 245 (252)
T ss_dssp S-CHHHHHHHHHTTHHHHHH-TTTTCSSSHHHHTHHHH
T ss_pred C-CHHHHHHHHHCCcHHHHH-HHhCCCCHHHHHHHHHH
Confidence 3 22222222 477788 88888887777776543
|
| >2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A | Back alignment and structure |
|---|
Probab=97.84 E-value=0.00017 Score=79.83 Aligned_cols=177 Identities=12% Similarity=0.080 Sum_probs=118.2
Q ss_pred hhHHHHHHHHhcCCCC---chhhHHHHHhccCCCh---hhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcC---h
Q 004157 328 KLLPLLASALEFGSAA---APALTALLKMGSWLST---EEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFS---A 398 (771)
Q Consensus 328 kILP~Ll~~~~~~~~~---~~~L~~ll~i~~~l~~---eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~---~ 398 (771)
.++|.|++.+...... ..++..+-.++..-+. .-....++|.+++++.+++..+|...+.-|..+...-+ .
T Consensus 64 ~~i~~L~~~L~~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~~~~~~vr~~a~~~L~~l~~~~~~~~~ 143 (450)
T 2jdq_A 64 GVVARFVEFLKRKENCTLQFESAWVLTNIASGNSLQTRIVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRD 143 (450)
T ss_dssp THHHHHHHHHTCTTCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred CcHHHHHHHHCCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHhCCCHHHHHHHHcCCCHHHHHHHHHHHHHHccCCHHHHH
Confidence 6888888877654211 1122223333332111 11234578888888888888888887777777765432 2
Q ss_pred hhhhhccHHHHHhhcCC-CcHHHHHHHHHHHHhhc----cCCChhHHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhc
Q 004157 399 QVVDEQVYPHVATGFAD-TSAFLREMTLKSMLVLA----PKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASH 473 (771)
Q Consensus 399 ~~v~~~I~p~l~~gf~D-~~~~iRe~tlk~i~~l~----~kL~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~ 473 (771)
..+...++|.++..+.+ .+..+|+.++..+..++ +...... ...++|.|.++..+.++.+|.+++-+|+.|+..
T Consensus 144 ~~~~~~~i~~L~~~l~~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~-~~~~l~~L~~~l~~~~~~v~~~a~~~L~~l~~~ 222 (450)
T 2jdq_A 144 YVLDCNILPPLLQLFSKQNRLTMTRNAVWALSNLCRGKSPPPEFAK-VSPCLNVLSWLLFVSDTDVLADACWALSYLSDG 222 (450)
T ss_dssp HHHHTTCHHHHHHHTTSCCCHHHHHHHHHHHHHHHCCSSSCCCGGG-TGGGHHHHHHHTTCCCHHHHHHHHHHHHHHTSS
T ss_pred HHHHCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCCCCCCHHH-HHHHHHHHHHHHccCCHHHHHHHHHHHHHHHCC
Confidence 34456788888888885 78899999888888888 3333333 356788888877788888999999999888875
Q ss_pred cCcch---hhHHhHHHHHHhhhcCCCcchhhheeee
Q 004157 474 LNEGT---RKRVLINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 474 L~~~~---~~~vL~~af~~~~lkD~f~~~R~a~l~a 506 (771)
-.... ...-+++.+. ..|+|+.+.+|.+++.+
T Consensus 223 ~~~~~~~~~~~~~i~~L~-~ll~~~~~~v~~~a~~~ 257 (450)
T 2jdq_A 223 PNDKIQAVIDAGVCRRLV-ELLMHNDYKVVSPALRA 257 (450)
T ss_dssp SHHHHHHHHHTTTHHHHH-HHTTCSCHHHHHHHHHH
T ss_pred CcHHHHHHHHcCcHHHHH-HHHCCCchhHHHHHHHH
Confidence 43211 1122577777 78888888888887776
|
| >1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16 | Back alignment and structure |
|---|
Probab=97.83 E-value=0.00013 Score=75.87 Aligned_cols=127 Identities=9% Similarity=0.058 Sum_probs=67.6
Q ss_pred hHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHH
Q 004157 366 VLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLL 445 (771)
Q Consensus 366 i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL 445 (771)
.++.++.++.++++.+|...+..|..+. ...++|.++..+.|.++.+|..++..+..+... ... ...++
T Consensus 24 ~i~~L~~~L~~~~~~vr~~A~~~L~~~~--------~~~~~~~L~~~l~d~~~~vR~~A~~aL~~l~~~--~~~-~~~l~ 92 (280)
T 1oyz_A 24 NDDELFRLLDDHNSLKRISSARVLQLRG--------GQDAVRLAIEFCSDKNYIRRDIGAFILGQIKIC--KKC-EDNVF 92 (280)
T ss_dssp CHHHHHHHTTCSSHHHHHHHHHHHHHHC--------CHHHHHHHHHHHTCSSHHHHHHHHHHHHHSCCC--TTT-HHHHH
T ss_pred hHHHHHHHHHcCCHHHHHHHHHHHHccC--------CchHHHHHHHHHcCCCHHHHHHHHHHHHHhccc--ccc-chHHH
Confidence 3455666666666666666555555443 123556666666666666666666665544321 111 22344
Q ss_pred HHHHh-hccCCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCCcchhhheeee
Q 004157 446 KYLSK-LQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 446 ~~lak-lq~D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R~a~l~a 506 (771)
+.|.. +..|+++.||.+++-+|+++....... ...+++.+. +.|+|+.+.+|.+++.+
T Consensus 93 ~~L~~~~~~d~~~~vr~~a~~aL~~l~~~~~~~--~~~~~~~L~-~~l~d~~~~vR~~a~~a 151 (280)
T 1oyz_A 93 NILNNMALNDKSACVRATAIESTAQRCKKNPIY--SPKIVEQSQ-ITAFDKSTNVRRATAFA 151 (280)
T ss_dssp HHHHHHHHHCSCHHHHHHHHHHHHHHHHHCGGG--HHHHHHHHH-HHTTCSCHHHHHHHHHH
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHhccCCcc--cHHHHHHHH-HHhhCCCHHHHHHHHHH
Confidence 54442 344666666666666666665432111 123455555 56666666666666555
|
| >1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A | Back alignment and structure |
|---|
Probab=97.74 E-value=0.00054 Score=82.55 Aligned_cols=201 Identities=12% Similarity=0.094 Sum_probs=139.7
Q ss_pred hhhHHHHHHHHhcCCCC----chhhHHHHHhccCC----ChhhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcCh
Q 004157 327 KKLLPLLASALEFGSAA----APALTALLKMGSWL----STEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSA 398 (771)
Q Consensus 327 ~kILP~Ll~~~~~~~~~----~~~L~~ll~i~~~l----~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~ 398 (771)
..++|.|.+.+...... ..++..+-.+...+ ..+.+...+++.+..+....|..+|...++.|..++...++
T Consensus 171 ~~ll~~l~~~l~~~~~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~il~~l~~~~~~~~~~vr~~a~~~l~~l~~~~~~ 250 (876)
T 1qgr_A 171 NEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQ 250 (876)
T ss_dssp HHHHHHHHHHHSTTCSCHHHHHHHHHHHHHHGGGCHHHHTSHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhHH
Confidence 34666676666544211 11223332222222 22334456888888888888889999999999988877654
Q ss_pred h---hhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCC----------------------Ch-hHHhHHHHHHHHhhc
Q 004157 399 Q---VVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKL----------------------SQ-RTISGSLLKYLSKLQ 452 (771)
Q Consensus 399 ~---~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL----------------------~~-~~l~~~LL~~laklq 452 (771)
. .+...|++.++.++.|.++.||..++..+..++... .. +.....++|.+-++-
T Consensus 251 ~~~~~~~~~l~~~~~~~~~~~~~~v~~~al~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~l 330 (876)
T 1qgr_A 251 YMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTL 330 (876)
T ss_dssp GCHHHHTTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCSSCCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHhHhhhhccccccCCCccchhHHHHHHHHHHHhHHHHHHh
Confidence 3 344479999999999999999999988777766432 00 011245666554443
Q ss_pred c-------CCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCCcchhhheeee--------c------c---
Q 004157 453 V-------DEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL--------S------Y--- 508 (771)
Q Consensus 453 ~-------D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R~a~l~a--------~------~--- 508 (771)
. |.+..+|..+..||+.|+..+++.. ...+++.+. ..|+|+.+..|.+++.+ . |
T Consensus 331 ~~~~~d~~~~~~~~r~~a~~~l~~l~~~~~~~~-~~~~l~~l~-~~l~~~~~~~r~~a~~~l~~i~~~~~~~~~~~~~~~ 408 (876)
T 1qgr_A 331 TKQDENDDDDDWNPCKAAGVCLMLLATCCEDDI-VPHVLPFIK-EHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQ 408 (876)
T ss_dssp TCCCSSCCTTCCCHHHHHHHHHHHHHHHHGGGG-HHHHHHHHH-HHTTCSSHHHHHHHHHHHHHTSSSSCHHHHHHHHHH
T ss_pred hcccccccccccHHHHHHHHHHHHHHHHCcHhh-HHHHHHHHH-HHccCCChHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 2 3467899999999999999998544 456788888 89999999999999887 1 1
Q ss_pred -----------CCHHHHHHHHHHHHHHHHHHH
Q 004157 509 -----------LNCDVRSKAFQAVDQFLQIVK 529 (771)
Q Consensus 509 -----------~~~~VR~~a~~~~~~~l~~l~ 529 (771)
++..||..|..++..|.+.+.
T Consensus 409 ~l~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~ 440 (876)
T 1qgr_A 409 AMPTLIELMKDPSVVVRDTAAWTVGRICELLP 440 (876)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHCG
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHhCc
Confidence 678899999999888887654
|
| >4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene} | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00039 Score=70.11 Aligned_cols=177 Identities=16% Similarity=0.162 Sum_probs=123.2
Q ss_pred hhhhHHHHHHHHhcCCCC--chhhHHHHHhccCCChhh-----hhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhc--
Q 004157 326 LKKLLPLLASALEFGSAA--APALTALLKMGSWLSTEE-----FSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSF-- 396 (771)
Q Consensus 326 ~~kILP~Ll~~~~~~~~~--~~~L~~ll~i~~~l~~ee-----f~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l-- 396 (771)
...++|.|++.+...... ..++..+-.++..- ++ ....++|.|+.++...+..+|...+.-|..+...-
T Consensus 42 ~~g~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~--~~~~~~~~~~~~i~~l~~ll~~~~~~v~~~a~~~L~~l~~~~~~ 119 (252)
T 4hxt_A 42 DAGGVEVLVKLLTSTDSEVQKEAARALANIASGP--DEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDE 119 (252)
T ss_dssp HTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSC--HHHHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHH
T ss_pred HCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCC--hHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHH
Confidence 345788888887754311 11222233333321 22 23347999999999999999988777777776422
Q ss_pred -ChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCCh---hHHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhh
Q 004157 397 -SAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQ---RTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIAS 472 (771)
Q Consensus 397 -~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~---~~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~ 472 (771)
-...+...++|.++..+.+.++.+|+.++..+-.++..-.. ..+...+++.|..+..++++.||.+++-||+.|+.
T Consensus 120 ~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~ 199 (252)
T 4hxt_A 120 AIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIAS 199 (252)
T ss_dssp HHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCcCHHHHHHHHCCCCHHHHHHHHHHHHHHHc
Confidence 23345567899999999999999999999999999875332 23455688999998888999999999999999997
Q ss_pred ccCcchhhHH----hHHHHHHhhhcCCCcchhhheeee
Q 004157 473 HLNEGTRKRV----LINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 473 ~L~~~~~~~v----L~~af~~~~lkD~f~~~R~a~l~a 506 (771)
. ..+.+..+ +++.+. +.++++...+|..|+.+
T Consensus 200 ~-~~~~~~~l~~~~~i~~L~-~ll~~~~~~v~~~a~~~ 235 (252)
T 4hxt_A 200 G-PTSAIKAIVDAGGVEVLQ-KLLTSTDSEVQKEAQRA 235 (252)
T ss_dssp S-BHHHHHHHHHTTHHHHHH-HGGGCSCHHHHHHHHHH
T ss_pred C-CHHHHHHHHHCCCHHHHH-HHHCCCcHHHHHHHHHH
Confidence 3 22333333 367787 78888776655555544
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00041 Score=71.56 Aligned_cols=62 Identities=10% Similarity=0.107 Sum_probs=45.9
Q ss_pred EEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccCcCCcccEEEEEecCC
Q 004157 35 SHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDATSTKITIYIVTEPV 109 (771)
Q Consensus 35 tVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d~~~~~~~iyIVtE~v 109 (771)
.||+.....++..+.+|+... .....+.+|...|+.|. +--|-+++.+.+++ ..-|+|||++
T Consensus 40 ~v~rl~~~~~~~~~~lk~~~~-----~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~--------~~~~lvme~l 102 (272)
T 4gkh_A 40 TIYRLYGKPNAPELFLKHGKG-----SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTP--------DDAWLLTTAI 102 (272)
T ss_dssp EEEEEECCTTCCCEEEEEEET-----HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEET--------TEEEEEEECC
T ss_pred eEEEEEecCCCeEEEEEECCC-----CCHhHHHHHHHHHHHhccCCCcCeEEEEEEEC--------CeEEEEEEee
Confidence 788888777788999998753 23445778999998885 22366777777653 3679999999
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=97.68 E-value=8.2e-05 Score=78.67 Aligned_cols=31 Identities=10% Similarity=0.094 Sum_probs=26.6
Q ss_pred CceecCCCCCCEEEcC--CCcEEEEccCccccc
Q 004157 149 KLVHGNVCLSSVVVTQ--TLDWKLHAFDVLSEF 179 (771)
Q Consensus 149 ~ivH~dIkp~NI~v~~--~G~~KL~dFgla~~~ 179 (771)
.++|||+++.||+++. .+.+.|+||+.+..-
T Consensus 192 ~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~ 224 (304)
T 3sg8_A 192 CLIHNDFSSDHILFDTEKNTICGIIDFGDAAIS 224 (304)
T ss_dssp EEECSCCCGGGEEEETTTTEEEEECCCTTCEEE
T ss_pred eeEeCCCCcccEEEeCCCCCEEEEEeCCCCccC
Confidence 5899999999999998 556889999988643
|
| >1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16 | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00037 Score=72.36 Aligned_cols=124 Identities=15% Similarity=0.131 Sum_probs=70.4
Q ss_pred hHHHHH-HhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHH
Q 004157 366 VLPTIV-KLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSL 444 (771)
Q Consensus 366 i~P~i~-~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~L 444 (771)
+++.+. .+...++..||...+.-|-.+....+. ....++|.+...+.|.++.||..++.++..+.. .+.
T Consensus 91 l~~~L~~~~~~d~~~~vr~~a~~aL~~l~~~~~~--~~~~~~~~L~~~l~d~~~~vR~~a~~aL~~~~~--------~~~ 160 (280)
T 1oyz_A 91 VFNILNNMALNDKSACVRATAIESTAQRCKKNPI--YSPKIVEQSQITAFDKSTNVRRATAFAISVIND--------KAT 160 (280)
T ss_dssp HHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHCGG--GHHHHHHHHHHHTTCSCHHHHHHHHHHHHTC-----------CC
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHhccCCc--ccHHHHHHHHHHhhCCCHHHHHHHHHHHHhcCC--------HHH
Confidence 344444 234556666776666666655533221 123456666677777777777776666654432 124
Q ss_pred HHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCCcchhhheeee
Q 004157 445 LKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 445 L~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R~a~l~a 506 (771)
++.|.++..|+++.||.+++..|++|... ..-.++.+. ..|+|+...+|.+++.+
T Consensus 161 ~~~L~~~l~d~~~~vr~~a~~aL~~~~~~------~~~~~~~L~-~~l~d~~~~vR~~A~~a 215 (280)
T 1oyz_A 161 IPLLINLLKDPNGDVRNWAAFAININKYD------NSDIRDCFV-EMLQDKNEEVRIEAIIG 215 (280)
T ss_dssp HHHHHHHHTCSSHHHHHHHHHHHHHHTCC------CHHHHHHHH-HHTTCSCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHhhccC------cHHHHHHHH-HHhcCCCHHHHHHHHHH
Confidence 45555555666667777777777666311 123455555 66677777777666666
|
| >1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00059 Score=77.81 Aligned_cols=180 Identities=12% Similarity=0.126 Sum_probs=124.5
Q ss_pred hhhhhhHHHHHHHHhcCCCC---chhhHHHHHhccCCCh---hhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhh--
Q 004157 324 IVLKKLLPLLASALEFGSAA---APALTALLKMGSWLST---EEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQS-- 395 (771)
Q Consensus 324 ~~~~kILP~Ll~~~~~~~~~---~~~L~~ll~i~~~l~~---eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~-- 395 (771)
+...-++|.|++.+...... ..++..+-.|+..-+. .-....++|.++.++.+.+..+|...+.-|..+...
T Consensus 126 ~~~~g~i~~Lv~~L~~~~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~vr~~A~~aL~~l~~~~~ 205 (530)
T 1wa5_B 126 VIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDST 205 (530)
T ss_dssp HHHTTCHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCH
T ss_pred HHHCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCc
Confidence 45566888888877654211 1122233344432211 112245689999998888889988887777777643
Q ss_pred -cChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhc----cCCChhHHhHHHHHHHHhhccCCCCcchhhHHHHHHHh
Q 004157 396 -FSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLA----PKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNI 470 (771)
Q Consensus 396 -l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~----~kL~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~ki 470 (771)
.....+...++|.++..+.+.+..+|..++..+..++ +.... .+...+++.|.++..++++.||.+++.||+.|
T Consensus 206 ~~~~~~~~~~~l~~L~~ll~~~~~~v~~~a~~~L~~L~~~~~~~~~~-~~~~~~l~~L~~lL~~~d~~v~~~a~~~L~~L 284 (530)
T 1wa5_B 206 DYRDYVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPDW-SVVSQALPTLAKLIYSMDTETLVDACWAISYL 284 (530)
T ss_dssp HHHHHHHHTTCHHHHHHGGGSCCHHHHHHHHHHHHHHHCCSSSCCCH-HHHGGGHHHHHHHTTCCCHHHHHHHHHHHHHH
T ss_pred cchHHHHHcCcHHHHHHHhccCCHHHHHHHHHHHHHHhCCCCCCCcH-HHHHhHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 2233455678999999999999999999999998888 44443 33467888888888888899999999999999
Q ss_pred hhccCcchhhH----HhHHHHHHhhhcCCCcchhhheeee
Q 004157 471 ASHLNEGTRKR----VLINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 471 a~~L~~~~~~~----vL~~af~~~~lkD~f~~~R~a~l~a 506 (771)
+..-.. .+.. -+++.+. ..|+++.+.+|.+++.+
T Consensus 285 ~~~~~~-~~~~~~~~~~v~~Lv-~lL~~~~~~v~~~a~~~ 322 (530)
T 1wa5_B 285 SDGPQE-AIQAVIDVRIPKRLV-ELLSHESTLVQTPALRA 322 (530)
T ss_dssp HSSCHH-HHHHHHHTTCHHHHH-HGGGCSCHHHHHHHHHH
T ss_pred hCCCHH-HHHHHHhcCcHHHHH-HHHCCCChhhHHHHHHH
Confidence 865322 1222 2477888 88999988888888776
|
| >1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00035 Score=79.73 Aligned_cols=205 Identities=14% Similarity=0.111 Sum_probs=145.7
Q ss_pred hhhhhHHHHHHHHhcCCC--CchhhHHHHHhccC---CChhhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcC--
Q 004157 325 VLKKLLPLLASALEFGSA--AAPALTALLKMGSW---LSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFS-- 397 (771)
Q Consensus 325 ~~~kILP~Ll~~~~~~~~--~~~~L~~ll~i~~~---l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~-- 397 (771)
....++|.|+..+..... ...++..+..++.. .....+...++|.|..++...|..+|...+.-|..+...-+
T Consensus 212 ~~~~~l~~L~~ll~~~~~~v~~~a~~~L~~L~~~~~~~~~~~~~~~~l~~L~~lL~~~d~~v~~~a~~~L~~L~~~~~~~ 291 (530)
T 1wa5_B 212 LQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEA 291 (530)
T ss_dssp HHTTCHHHHHHGGGSCCHHHHHHHHHHHHHHHCCSSSCCCHHHHGGGHHHHHHHTTCCCHHHHHHHHHHHHHHHSSCHHH
T ss_pred HHcCcHHHHHHHhccCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHhHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCHHH
Confidence 334567777777654221 11222333344432 22344556789999999999999999888877777765432
Q ss_pred -hhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCCh---hHHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhc
Q 004157 398 -AQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQ---RTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASH 473 (771)
Q Consensus 398 -~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~---~~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~ 473 (771)
...+...++|.++..+.+.++.+|+.++..+..++..-.. ..+...+++.|..+..++++.||..++.+|+.|+..
T Consensus 292 ~~~~~~~~~v~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~lL~~~~~~vr~~A~~aL~~l~~~ 371 (530)
T 1wa5_B 292 IQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAG 371 (530)
T ss_dssp HHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTS
T ss_pred HHHHHhcCcHHHHHHHHCCCChhhHHHHHHHHHHHHcCCHHHHHHHHHcchHHHHHHHHcCCCHHHHHHHHHHHHHHHcC
Confidence 2344557999999999999999999999999988854332 234457888898888888999999999999999864
Q ss_pred cCcchhhH----HhHHHHHHhhhcCCCcchhhheeee---------c---c-------------------CCHHHHHHHH
Q 004157 474 LNEGTRKR----VLINAFTVRALRDTFSPARGAAKIL---------S---Y-------------------LNCDVRSKAF 518 (771)
Q Consensus 474 L~~~~~~~----vL~~af~~~~lkD~f~~~R~a~l~a---------~---~-------------------~~~~VR~~a~ 518 (771)
-. ..+.. -+++.+. ..|+++...+|.+++.+ . + .+..||..|.
T Consensus 372 ~~-~~~~~~~~~~~l~~L~-~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~l~~~~~l~~L~~ll~~~~~~v~~~al 449 (530)
T 1wa5_B 372 NT-EQIQAVIDANLIPPLV-KLLEVAEYKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTL 449 (530)
T ss_dssp CH-HHHHHHHHTTCHHHHH-HHHHHSCHHHHHHHHHHHHHHHHHTTTCTHHHHHHHHTTCHHHHHHHTTTCCHHHHHHHH
T ss_pred CH-HHHHHHHHCCCHHHHH-HHHhcCCHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHH
Confidence 22 22222 2477888 88999888888887766 1 0 6788999999
Q ss_pred HHHHHHHHHHHHH
Q 004157 519 QAVDQFLQIVKQY 531 (771)
Q Consensus 519 ~~~~~~l~~l~~~ 531 (771)
.++..++..-+..
T Consensus 450 ~aL~~l~~~~~~~ 462 (530)
T 1wa5_B 450 DALENILKMGEAD 462 (530)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhh
Confidence 9999988776654
|
| >1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A | Back alignment and structure |
|---|
Probab=97.64 E-value=0.00027 Score=85.21 Aligned_cols=139 Identities=12% Similarity=0.119 Sum_probs=111.0
Q ss_pred hhhHHHHHHhhc-------CCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCC
Q 004157 364 VKVLPTIVKLFA-------SNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLS 436 (771)
Q Consensus 364 ~~i~P~i~~lF~-------~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~ 436 (771)
..++|.+.++.. ..++.+|...++-|..++..++.. +-..++|.+..++.|.+..+|++++.++-.++..+.
T Consensus 320 ~~ll~~ll~~l~~~~~d~~~~~~~~r~~a~~~l~~l~~~~~~~-~~~~~l~~l~~~l~~~~~~~r~~a~~~l~~i~~~~~ 398 (876)
T 1qgr_A 320 QYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDD-IVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPE 398 (876)
T ss_dssp HHHHHHHHHHTTCCCSSCCTTCCCHHHHHHHHHHHHHHHHGGG-GHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSC
T ss_pred HHHhHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHCcHh-hHHHHHHHHHHHccCCChHHHHHHHHHHHHHHcCCC
Confidence 567777777764 345789999999999999988854 455799999999999999999999999999998877
Q ss_pred hh---HHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcc----hhhHHhHHHHHHhhhcCCCcchhhheee
Q 004157 437 QR---TISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEG----TRKRVLINAFTVRALRDTFSPARGAAKI 505 (771)
Q Consensus 437 ~~---~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~----~~~~vL~~af~~~~lkD~f~~~R~a~l~ 505 (771)
.. .....++|.|.++..|+.+.||..++.+|++++..+... .-...+++.+. +.|+|+ ..+|.+++.
T Consensus 399 ~~~~~~~~~~~l~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~l~~~l~~l~-~~l~~~-~~v~~~a~~ 472 (876)
T 1qgr_A 399 PSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAAINDVYLAPLLQCLI-EGLSAE-PRVASNVCW 472 (876)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHCGGGTSSTTTHHHHHHHHH-HHTTSC-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhCchhcccHHHHHHHHHHHH-HHHcCC-HHHHHHHHH
Confidence 33 234678999988889999999999999999999998652 22345677777 789986 666766543
|
| >4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00093 Score=75.99 Aligned_cols=223 Identities=12% Similarity=0.073 Sum_probs=148.4
Q ss_pred CChhhHHhhhhhchhhhcCCC----hhhhhhhhHHHHHHHHhcCCCCc---hhhHHHHHhccCCCh---hhhhhhhHHHH
Q 004157 301 KDSVEKDTFFRKLPNLAEQLP----RQIVLKKLLPLLASALEFGSAAA---PALTALLKMGSWLST---EEFSVKVLPTI 370 (771)
Q Consensus 301 k~~~eK~~F~~~L~~~l~~fP----~~~~~~kILP~Ll~~~~~~~~~~---~~L~~ll~i~~~l~~---eef~~~i~P~i 370 (771)
.++..+..-...|..++..-+ ..+...-++|.|++.+....... .++..+-.|+..-+. .-...-++|.|
T Consensus 86 ~~~~~~~~A~~~L~~l~s~~~~~~~~~~~~~g~v~~Lv~lL~~~~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~g~i~~L 165 (528)
T 4b8j_A 86 DDNNLQLEATTQFRKLLSIERSPPIEEVIQSGVVPRFVQFLTREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIF 165 (528)
T ss_dssp SCHHHHHHHHHHHHHHHTCSSSCCHHHHHHTTCHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCHHHHHHHHhCCcHHHH
Confidence 344444433344444433222 34566678999999887643111 123333444442111 11223478999
Q ss_pred HHhhcCCcHHHHHHHHHhHHHHHhhc---ChhhhhhccHHHHHhhc-CCCcHHHHHHHHHHHHhhccCC--ChhHHhHHH
Q 004157 371 VKLFASNDRAIRVALLQHIDQYGQSF---SAQVVDEQVYPHVATGF-ADTSAFLREMTLKSMLVLAPKL--SQRTISGSL 444 (771)
Q Consensus 371 ~~lF~~~Dr~iR~~LL~~l~~~~~~l---~~~~v~~~I~p~l~~gf-~D~~~~iRe~tlk~i~~l~~kL--~~~~l~~~L 444 (771)
+.++.+++..+|...+.-|-.+...- -...+...++|.++..+ .+.++.+|..++..+..++..- ....+...+
T Consensus 166 ~~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~~i~~~g~l~~Ll~lL~~~~~~~v~~~a~~~L~~L~~~~~~~~~~~~~~~ 245 (528)
T 4b8j_A 166 VKLLGSSSDDVREQAVWALGNVAGDSPKCRDLVLANGALLPLLAQLNEHTKLSMLRNATWTLSNFCRGKPQPSFEQTRPA 245 (528)
T ss_dssp HHHTTCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHTTCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCSSSCCCHHHHTTH
T ss_pred HHHhcCCCHHHHHHHHHHHHHHhCCChhhHHHHHHCCcHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCCCcHHHHHHH
Confidence 99999999999977776666665432 22345556899999999 7788999999999998888653 223345678
Q ss_pred HHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHH----hHHHHHHhhhcCCCcchhhheeee----cc--------
Q 004157 445 LKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRV----LINAFTVRALRDTFSPARGAAKIL----SY-------- 508 (771)
Q Consensus 445 L~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~v----L~~af~~~~lkD~f~~~R~a~l~a----~~-------- 508 (771)
++.|.++..++++.||.+++-+|+.|+..-.. ....+ +++.+. ..|+++...+|..++.+ ..
T Consensus 246 l~~L~~lL~~~~~~v~~~a~~aL~~l~~~~~~-~~~~~~~~g~v~~Lv-~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~ 323 (528)
T 4b8j_A 246 LPALARLIHSNDEEVLTDACWALSYLSDGTND-KIQAVIEAGVCPRLV-ELLLHPSPSVLIPALRTVGNIVTGDDAQTQC 323 (528)
T ss_dssp HHHHHHHTTCCCHHHHHHHHHHHHHHTSSCHH-HHHHHHHTTCHHHHH-HHTTCSCHHHHHHHHHHHHHHTTSCHHHHHH
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHcCCHH-HHHHHHHcCHHHHHH-HHHcCCChhHHHHHHHHHHHHHcCCHHHHHH
Confidence 89999988888999999999999999965332 11222 478888 89999999999888877 10
Q ss_pred ----------------C-CHHHHHHHHHHHHHHH
Q 004157 509 ----------------L-NCDVRSKAFQAVDQFL 525 (771)
Q Consensus 509 ----------------~-~~~VR~~a~~~~~~~l 525 (771)
. +..||..|-.++..+.
T Consensus 324 ~~~~~~l~~L~~lL~~~~~~~v~~~A~~~L~nl~ 357 (528)
T 4b8j_A 324 IIDHQALPCLLSLLTQNLKKSIKKEACWTISNIT 357 (528)
T ss_dssp HHTTTHHHHHHHHHHSCCCHHHHHHHHHHHHHHH
T ss_pred HHHhhhHHHHHHHHcCCCcHHHHHHHHHHHHHHH
Confidence 4 6778887777766554
|
| >2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00022 Score=82.87 Aligned_cols=134 Identities=13% Similarity=0.242 Sum_probs=102.5
Q ss_pred hHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHH
Q 004157 366 VLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLL 445 (771)
Q Consensus 366 i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL 445 (771)
..+.+++++.++|..+|-..--.+..+.+. .++ +.--+.+.+...+.|.++.+|..+++++..+. ...+...|+
T Consensus 50 ~~~~vi~l~~s~~~~~Krl~yl~l~~~~~~-~~e-~~~l~~n~l~kdL~~~n~~ir~~AL~~L~~i~----~~~~~~~l~ 123 (591)
T 2vgl_B 50 LFPDVVNCMQTDNLELKKLVYLYLMNYAKS-QPD-MAIMAVNSFVKDCEDPNPLIRALAVRTMGCIR----VDKITEYLC 123 (591)
T ss_dssp GHHHHHHTTSSSCHHHHHHHHHHHHHHHHH-SHH-HHHTTHHHHGGGSSSSSHHHHHHHHHHHHTCC----SGGGHHHHH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHccc-Cch-HHHHHHHHHHHHcCCCCHHHHHHHHHHHHcCC----hHHHHHHHH
Confidence 456677888888887774443344444443 222 23446788999999999999999999987765 455677888
Q ss_pred HHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCCcchhhheeee
Q 004157 446 KYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 446 ~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R~a~l~a 506 (771)
+.+.++..|+++.||.+++.|+++|...-.......-+++.+. ++|.|+.+.+|.+|+.+
T Consensus 124 ~~l~~~L~d~~~~VRk~A~~al~~i~~~~p~~~~~~~~~~~l~-~lL~d~d~~V~~~A~~a 183 (591)
T 2vgl_B 124 EPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLR-DLIADSNPMVVANAVAA 183 (591)
T ss_dssp HHHHHHSSCSCHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHH-HTTSCSCHHHHHHHHHH
T ss_pred HHHHHHcCCCChHHHHHHHHHHHHHHhhChhhcccccHHHHHH-HHhCCCChhHHHHHHHH
Confidence 8898988999999999999999999984333233346789999 99999999999999888
|
| >2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00035 Score=72.02 Aligned_cols=146 Identities=12% Similarity=0.118 Sum_probs=111.2
Q ss_pred hhhhhhhhHHHHHHhh-cCCcHHHHHHHHHhHHHHHhhcC-hhh---hhhccHHHHHhhcCCCcHHHHHHHHHHHHhhcc
Q 004157 359 TEEFSVKVLPTIVKLF-ASNDRAIRVALLQHIDQYGQSFS-AQV---VDEQVYPHVATGFADTSAFLREMTLKSMLVLAP 433 (771)
Q Consensus 359 ~eef~~~i~P~i~~lF-~~~Dr~iR~~LL~~l~~~~~~l~-~~~---v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~ 433 (771)
..+|. .++..|.+.. ...+..+|..-++-+..++..+. +.. +-..|+|.++..|.|..+.||++...++..++.
T Consensus 55 ~~~~~-~~~~~L~~~l~~D~n~~v~~~A~~al~~la~~l~~~~f~~~y~~~llp~ll~~l~dkk~~V~~aa~~al~~i~~ 133 (249)
T 2qk1_A 55 SQNYS-NLLGIYGHIIQKDANIQAVALAAQSVELICDKLKTPGFSKDYVSLVFTPLLDRTKEKKPSVIEAIRKALLTICK 133 (249)
T ss_dssp TCCCH-HHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHCTTTSCHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHH
T ss_pred cccHH-HHHHHHHHHhccCCCHHHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 44554 4577888888 68888999999999999999897 432 335689999999999999999998888888887
Q ss_pred CCChhHH---hHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCc--c---hhh-HHhHHHHHHhhhcCCCcchhhhee
Q 004157 434 KLSQRTI---SGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNE--G---TRK-RVLINAFTVRALRDTFSPARGAAK 504 (771)
Q Consensus 434 kL~~~~l---~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~--~---~~~-~vL~~af~~~~lkD~f~~~R~a~l 504 (771)
.++...+ ...||+.|........+.||..++.+|+.++..-.. . ... +.|+|.+. +.|.|+...+|-||.
T Consensus 134 ~~~~~~~~~~l~~ll~~l~~~l~~k~~~vk~~al~~l~~~~~~~~~~~~~l~~~l~~~iip~l~-~~l~D~~~~VR~aA~ 212 (249)
T 2qk1_A 134 YYDPLASSGRNEDMLKDILEHMKHKTPQIRMECTQLFNASMKEEKDGYSTLQRYLKDEVVPIVI-QIVNDTQPAIRTIGF 212 (249)
T ss_dssp HSCTTCTTCTTHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCCSCSHHHHHHHTTTHHHHHH-HHHTCSSHHHHHHHH
T ss_pred HccccccCCcHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHH-HHhcCCCHHHHHHHH
Confidence 7743211 235666666555556899999999999999988764 1 123 67899999 999998766666655
Q ss_pred ee
Q 004157 505 IL 506 (771)
Q Consensus 505 ~a 506 (771)
.+
T Consensus 213 ~~ 214 (249)
T 2qk1_A 213 ES 214 (249)
T ss_dssp HH
T ss_pred HH
Confidence 54
|
| >4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00031 Score=71.38 Aligned_cols=141 Identities=19% Similarity=0.173 Sum_probs=111.7
Q ss_pred hhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhc---ChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChh--
Q 004157 364 VKVLPTIVKLFASNDRAIRVALLQHIDQYGQSF---SAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQR-- 438 (771)
Q Consensus 364 ~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l---~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~-- 438 (771)
..++|.+++++...+..+|...+.-|..+...- ....+...++|.++..+.+.++.+|+.++..+..++..-..+
T Consensus 53 ~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~ 132 (252)
T 4db8_A 53 AGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQ 132 (252)
T ss_dssp TTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred cCcHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHhhcCCchHHH
Confidence 457899999999999999988877777766432 233455668999999999999999999999999988765544
Q ss_pred -HHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhh----HHhHHHHHHhhhcCCCcchhhheeee
Q 004157 439 -TISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRK----RVLINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 439 -~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~----~vL~~af~~~~lkD~f~~~R~a~l~a 506 (771)
.+...+++.|.++..++++.||.+++-+|+.|+..-.. .+. .-+++.+. +.|+++...+|..++.+
T Consensus 133 ~~~~~~~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~-~~~~~~~~~~i~~L~-~ll~~~~~~v~~~a~~~ 203 (252)
T 4db8_A 133 AVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNE-QIQAVIDAGALPALV-QLLSSPNEQILQEALWA 203 (252)
T ss_dssp HHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHH-HHHHHHHTTCHHHHH-HGGGCSSHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChH-HHHHHHHCCCHHHHH-HHHCCCCHHHHHHHHHH
Confidence 34556889999988889999999999999999964322 222 22478888 89999999999888877
|
| >4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A | Back alignment and structure |
|---|
Probab=97.53 E-value=0.0012 Score=75.06 Aligned_cols=204 Identities=15% Similarity=0.152 Sum_probs=148.0
Q ss_pred hhhHHHHHHHHhcCCC---CchhhHHHHHhccC--CChhhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcCh---
Q 004157 327 KKLLPLLASALEFGSA---AAPALTALLKMGSW--LSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSA--- 398 (771)
Q Consensus 327 ~kILP~Ll~~~~~~~~---~~~~L~~ll~i~~~--l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~--- 398 (771)
..++|.|+..+..... ...++..+..++.. .........++|.|++++...|..++...+.-|..+...-+.
T Consensus 201 ~g~l~~Ll~lL~~~~~~~v~~~a~~~L~~L~~~~~~~~~~~~~~~l~~L~~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~ 280 (528)
T 4b8j_A 201 NGALLPLLAQLNEHTKLSMLRNATWTLSNFCRGKPQPSFEQTRPALPALARLIHSNDEEVLTDACWALSYLSDGTNDKIQ 280 (528)
T ss_dssp TTCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCSSSCCCHHHHTTHHHHHHHHTTCCCHHHHHHHHHHHHHHTSSCHHHHH
T ss_pred CCcHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHcCCHHHHH
Confidence 3467777776632211 11222333344433 223445577899999999999999998888888777755432
Q ss_pred hhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCCh---hHHhHHHHHHHHhhccCC-CCcchhhHHHHHHHhhhcc
Q 004157 399 QVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQ---RTISGSLLKYLSKLQVDE-EPAIRTNTTILLGNIASHL 474 (771)
Q Consensus 399 ~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~---~~l~~~LL~~laklq~D~-~~~IRtnt~icl~kia~~L 474 (771)
..+...++|.++..+.+.++.+|+.++..|-.++..-.. ..+...+++.|..+..++ ++.||..++-+|+.|+..
T Consensus 281 ~~~~~g~v~~Lv~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~~~~l~~L~~lL~~~~~~~v~~~A~~~L~nl~~~- 359 (528)
T 4b8j_A 281 AVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTGDDAQTQCIIDHQALPCLLSLLTQNLKKSIKKEACWTISNITAG- 359 (528)
T ss_dssp HHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHTTTHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTS-
T ss_pred HHHHcCHHHHHHHHHcCCChhHHHHHHHHHHHHHcCCHHHHHHHHHhhhHHHHHHHHcCCCcHHHHHHHHHHHHHHHCC-
Confidence 345567999999999999999999999999988864332 234566788888888787 899999999999999973
Q ss_pred CcchhhH----HhHHHHHHhhhcCCCcchhhheeee------c-------c----------------CCHHHHHHHHHHH
Q 004157 475 NEGTRKR----VLINAFTVRALRDTFSPARGAAKIL------S-------Y----------------LNCDVRSKAFQAV 521 (771)
Q Consensus 475 ~~~~~~~----vL~~af~~~~lkD~f~~~R~a~l~a------~-------~----------------~~~~VR~~a~~~~ 521 (771)
....+.. -++|.+. ..|++....+|.+++.+ . | .+..||..|..++
T Consensus 360 ~~~~~~~~~~~~~i~~L~-~lL~~~~~~v~~~a~~aL~nl~~~~~~~~~~~l~~~~~i~~L~~lL~~~d~~v~~~al~~L 438 (528)
T 4b8j_A 360 NKDQIQAVINAGIIGPLV-NLLQTAEFDIKKEAAWAISNATSGGSHDQIKYLVSEGCIKPLCDLLICPDIRIVTVCLEGL 438 (528)
T ss_dssp CHHHHHHHHHTTCHHHHH-HHHHHSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCHHHHH-HHHhcCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHH
Confidence 2222222 2378888 89999999999888877 0 0 7889999999999
Q ss_pred HHHHHHHHHHH
Q 004157 522 DQFLQIVKQYH 532 (771)
Q Consensus 522 ~~~l~~l~~~~ 532 (771)
..++..-++..
T Consensus 439 ~~l~~~~~~~~ 449 (528)
T 4b8j_A 439 ENILKVGETDK 449 (528)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 99988776643
|
| >3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00067 Score=77.54 Aligned_cols=206 Identities=13% Similarity=0.143 Sum_probs=147.4
Q ss_pred CChhhhhhhhHHHHHHHHhcCCCC--chhhHHHHHhccCCCh---hhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHh
Q 004157 320 LPRQIVLKKLLPLLASALEFGSAA--APALTALLKMGSWLST---EEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQ 394 (771)
Q Consensus 320 fP~~~~~~kILP~Ll~~~~~~~~~--~~~L~~ll~i~~~l~~---eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~ 394 (771)
.+.......++|.|.+.+...... ..++..+..++..-.. .-....++|.|+.++...+..++...+.-|-.++.
T Consensus 243 ~~~~~~~~~~lp~L~~LL~~~~~~v~~~a~~aL~~l~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~a~~aL~nl~~ 322 (529)
T 3tpo_A 243 APPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVT 322 (529)
T ss_dssp CCCHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTT
T ss_pred hhhHHHHhhHHHHHHHHhcCCcHHHHHHHHHHHHHhhhhhhhhHHHHHhccchHHHHHHhcCCChhHHHHHHHHHHHHHc
Confidence 344445567899999887654321 1122223333332211 11235588999999999999988777766666653
Q ss_pred h---cChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCCh---hHHhHHHHHHHHhhccCCCCcchhhHHHHHH
Q 004157 395 S---FSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQ---RTISGSLLKYLSKLQVDEEPAIRTNTTILLG 468 (771)
Q Consensus 395 ~---l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~---~~l~~~LL~~laklq~D~~~~IRtnt~icl~ 468 (771)
. .....+...++|.|+..+.+.++.||+.++..+..++..-.. ..+...++|.|-.+..+.+..||..++-+|+
T Consensus 323 ~~~~~~~~i~~~g~l~~L~~LL~~~~~~i~~~a~~aL~nl~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~ 402 (529)
T 3tpo_A 323 GTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKAAAWAIT 402 (529)
T ss_dssp SCHHHHHHHHHTTGGGGHHHHTTCSSHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHH
T ss_pred cchHHHHHHhhcccHHHHHHHHcCCCHHHHHHHHHHHHHHhcccHHHHHHHHhcCcHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 3 233456677899999999999999999999999888754332 2345568888888888889999999999999
Q ss_pred HhhhccCcchhhHH----hHHHHHHhhhcCCCcchhhheeee-----c----------c-------------------CC
Q 004157 469 NIASHLNEGTRKRV----LINAFTVRALRDTFSPARGAAKIL-----S----------Y-------------------LN 510 (771)
Q Consensus 469 kia~~L~~~~~~~v----L~~af~~~~lkD~f~~~R~a~l~a-----~----------~-------------------~~ 510 (771)
.++..=..+.+..+ .++.+. .+|+.+....+..+|.+ . | .+
T Consensus 403 nl~~~~~~~~~~~l~~~g~i~~L~-~LL~~~d~~i~~~~L~aL~nil~~~~~~~~~~~~~~~iee~ggl~~ie~Lq~~~n 481 (529)
T 3tpo_A 403 NYTSGGTVEQIVYLVHCGIIEPLM-NLLSAKDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQRHEN 481 (529)
T ss_dssp HHHHHSCHHHHHHHHHTTCHHHHH-HGGGCSCHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHTTCHHHHTGGGGCSS
T ss_pred HHHcCCCHHHHHHHHHCcCHHHHH-HHhcCCCHHHHHHHHHHHHHHHHHhHhccChHHHHHHHHHCCcHHHHHHHHcCCC
Confidence 99876554443333 278888 89999999999888776 0 1 88
Q ss_pred HHHHHHHHHHHHHHHH
Q 004157 511 CDVRSKAFQAVDQFLQ 526 (771)
Q Consensus 511 ~~VR~~a~~~~~~~l~ 526 (771)
.+|+..|++.++.|..
T Consensus 482 ~~i~~~A~~iie~yf~ 497 (529)
T 3tpo_A 482 ESVYKASLNLIEKYFS 497 (529)
T ss_dssp HHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHCC
Confidence 9999999999999975
|
| >2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00026 Score=82.28 Aligned_cols=112 Identities=15% Similarity=0.215 Sum_probs=91.9
Q ss_pred hhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhH
Q 004157 360 EEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRT 439 (771)
Q Consensus 360 eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~ 439 (771)
.|..-.+++.|.+.+.++++.+|-..|.-|..+ ....+.+.++|.+..++.|.++.||..++.++..++.+-.+..
T Consensus 81 ~e~~~l~~n~l~kdL~~~n~~ir~~AL~~L~~i----~~~~~~~~l~~~l~~~L~d~~~~VRk~A~~al~~i~~~~p~~~ 156 (591)
T 2vgl_B 81 PDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCI----RVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMV 156 (591)
T ss_dssp HHHHHTTHHHHGGGSSSSSHHHHHHHHHHHHTC----CSGGGHHHHHHHHHHHSSCSCHHHHHHHHHHHHHHHHSSCCCH
T ss_pred chHHHHHHHHHHHHcCCCCHHHHHHHHHHHHcC----ChHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhhChhhc
Confidence 455566788888989999999998887655444 3555667799999999999999999999999999998554433
Q ss_pred HhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccC
Q 004157 440 ISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLN 475 (771)
Q Consensus 440 l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~ 475 (771)
-...+++.|.++..|+++.||.+++.+|+.|++.-.
T Consensus 157 ~~~~~~~~l~~lL~d~d~~V~~~A~~aL~~i~~~~~ 192 (591)
T 2vgl_B 157 EDQGFLDSLRDLIADSNPMVVANAVAALSEISESHP 192 (591)
T ss_dssp HHHHHHHHHHHTTSCSCHHHHHHHHHHHHHHTTSCC
T ss_pred ccccHHHHHHHHhCCCChhHHHHHHHHHHHHHhhCC
Confidence 335789999999999999999999999999998643
|
| >3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ... | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00075 Score=76.83 Aligned_cols=206 Identities=13% Similarity=0.154 Sum_probs=146.5
Q ss_pred CChhhhhhhhHHHHHHHHhcCCCC--chhhHHHHHhccCCCh--h-hhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHh
Q 004157 320 LPRQIVLKKLLPLLASALEFGSAA--APALTALLKMGSWLST--E-EFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQ 394 (771)
Q Consensus 320 fP~~~~~~kILP~Ll~~~~~~~~~--~~~L~~ll~i~~~l~~--e-ef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~ 394 (771)
.+.-.....++|.|.+.+...... ..++..+-.++..-.. + -....++|.|+.++...+..++...+.-+-.+..
T Consensus 224 ~~~~~~~~~~lp~L~~LL~~~~~~v~~~A~~aL~~L~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~al~aL~nl~~ 303 (510)
T 3ul1_B 224 APPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVT 303 (510)
T ss_dssp CCCHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHhHHHHHHHHHhcCCHHHHHHHHHHHHHHhhchhhhHHHHHhcccchhhhhhhcCCChhhhhHHHHHHHHhhc
Confidence 334444567889998877654321 1122223333332211 1 1234578999999999999988777766665543
Q ss_pred h---cChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCCh---hHHhHHHHHHHHhhccCCCCcchhhHHHHHH
Q 004157 395 S---FSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQ---RTISGSLLKYLSKLQVDEEPAIRTNTTILLG 468 (771)
Q Consensus 395 ~---l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~---~~l~~~LL~~laklq~D~~~~IRtnt~icl~ 468 (771)
. .....+...++|.|+..+.+.+..||+.++..+..++..-.+ ..+...++|.|-.+..+.+..||.+++.+|+
T Consensus 304 ~~~~~~~~i~~~g~l~~L~~LL~~~~~~v~~~A~~aL~nl~a~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~Aa~aL~ 383 (510)
T 3ul1_B 304 GTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAIT 383 (510)
T ss_dssp SCHHHHHHHHHTTGGGGCC-CTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHH
T ss_pred CCHHHHHHHhhccchHHHHHHhcCCCHHHHHHHHHHHHHHHcCcHHHHHHHHhcCCHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 3 233456677899999999999999999999999988754332 2345568888888888899999999999999
Q ss_pred HhhhccCcchhhHH----hHHHHHHhhhcCCCcchhhheeee-----c----------c-------------------CC
Q 004157 469 NIASHLNEGTRKRV----LINAFTVRALRDTFSPARGAAKIL-----S----------Y-------------------LN 510 (771)
Q Consensus 469 kia~~L~~~~~~~v----L~~af~~~~lkD~f~~~R~a~l~a-----~----------~-------------------~~ 510 (771)
.++..-..+.+..+ .++.|. ..|+.+.+..+..+|.+ + | ++
T Consensus 384 Nl~~~~~~~~~~~L~~~g~i~~L~-~LL~~~d~~i~~~~L~aL~nil~~~~~~~~~~~~~~~iee~ggl~~ie~Lq~~~n 462 (510)
T 3ul1_B 384 NYTSGGTVEQIVYLVHCGIIEPLM-NLLSAKDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQRHEN 462 (510)
T ss_dssp HHHHHCCHHHHHHHHHTTCHHHHH-HGGGCSCHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHTTHHHHHHHGGGCSS
T ss_pred HHHccCCHHHHHHHHHCCCHHHHH-HHhcCCCHHHHHHHHHHHHHHHHHhHhccchHHHHHHHHHcCcHHHHHHHHcCCC
Confidence 99986655544433 278888 89999999999888876 0 1 78
Q ss_pred HHHHHHHHHHHHHHHH
Q 004157 511 CDVRSKAFQAVDQFLQ 526 (771)
Q Consensus 511 ~~VR~~a~~~~~~~l~ 526 (771)
.+|+..|.+.++.|..
T Consensus 463 ~~i~~~A~~iie~yf~ 478 (510)
T 3ul1_B 463 ESVYKASLNLIEKYFS 478 (510)
T ss_dssp HHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHCC
Confidence 8999999999999874
|
| >3tjz_B Coatomer subunit gamma; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus} | Back alignment and structure |
|---|
Probab=97.33 E-value=0.001 Score=71.91 Aligned_cols=147 Identities=17% Similarity=0.223 Sum_probs=113.5
Q ss_pred HHHHhccCCChhhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHH
Q 004157 349 ALLKMGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSM 428 (771)
Q Consensus 349 ~ll~i~~~l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i 428 (771)
-++..|+.++..| ...+.+.++++|.++|-.+|-++.-++..|.+. +++.+ -+...|.+=++|.++.+|-.+|+.|
T Consensus 53 ~l~~~G~~f~~~e-~t~lf~~v~kl~~s~d~~lKrLvYLyl~~~~~~-~~e~i--Lv~Nsl~kDl~~~N~~iR~lALRtL 128 (355)
T 3tjz_B 53 YLINQGEHLGTTE-ATEAFFAMTKLFQSNDPTLRRMCYLTIKEMSCI-AEDVI--IVTSSLTKDMTGKEDSYRGPAVRAL 128 (355)
T ss_dssp HHHHHTCCCCHHH-HHHHHHHHHGGGGCCCHHHHHHHHHHHHHHTTT-SSCGG--GGHHHHHHHHHSSCHHHHHHHHHHH
T ss_pred HHHHCCCCCchhH-HHHHHHHHHHHhcCCCHHHHHHHHHHHHHhCCC-HHHHH--HHHHHHHhhcCCCcHhHHHHHHHHH
Confidence 3455566665554 346788999999999998886666666666665 44433 5788999999999999999999999
Q ss_pred HhhccCCChhHHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCCcchhhheeee
Q 004157 429 LVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 429 ~~l~~kL~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R~a~l~a 506 (771)
..|. ...+...|.+++.+...|..|.||.++++|..+|.+.-.+ .. +-++.... .++.|..+-+-..|+.+
T Consensus 129 ~~I~----~~~m~~~l~~~lk~~L~d~~pyVRk~A~l~~~kL~~~~pe-~v-~~~~~~l~-~ll~d~n~~V~~~Al~l 199 (355)
T 3tjz_B 129 CQIT----DSTMLQAIERYMKQAIVDKVPSVSSSALVSSLHLLKCSFD-VV-KRWVNEAQ-EAASSDNIMVQYHALGL 199 (355)
T ss_dssp HHHC----CTTTHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHTTTCHH-HH-HTTHHHHH-HHTTCSSHHHHHHHHHH
T ss_pred hcCC----CHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhccCHH-HH-HHHHHHHH-HHhcCCCccHHHHHHHH
Confidence 8774 4456788999999999999999999999999999876443 32 34788888 89999876666555555
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=97.20 E-value=0.001 Score=72.92 Aligned_cols=74 Identities=12% Similarity=0.028 Sum_probs=42.8
Q ss_pred CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC--c---hhHHHHHHHHHHHHhcCCC--CC-eeEEeeeEEecccCc
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA--Q---DGHLAAARNGVKRLRTVRH--PN-ILAFLHSTEVENIDA 95 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~--~---~~~~~~~~~ei~~Lk~LrH--Pn-Ilkv~d~~e~e~~d~ 95 (771)
+.+|.|. + .||+++...++..|.||....... . ......+..|.+.|+.+.. |. +.+++.+. ..
T Consensus 36 ~~lg~G~~n--~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~~--- 108 (397)
T 2olc_A 36 QEIGDGNLN--YVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TE--- 108 (397)
T ss_dssp EECCSSSSE--EEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TT---
T ss_pred EECCCCceE--EEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--CC---
Confidence 4677776 6 899997666678999998653211 0 0112345678888887742 33 44555432 11
Q ss_pred CCcccEEEEEecCCc
Q 004157 96 TSTKITIYIVTEPVM 110 (771)
Q Consensus 96 ~~~~~~iyIVtE~v~ 110 (771)
..++|||++.
T Consensus 109 -----~~~lvmE~l~ 118 (397)
T 2olc_A 109 -----MAVTVMEDLS 118 (397)
T ss_dssp -----TTEEEECCCT
T ss_pred -----ccEEEEEeCC
Confidence 3489999993
|
| >4ffb_C Protein STU2; tubulin fold, heat repeats, cytoskeleton, microtubule, tubul domain, hydrolase; HET: GTP; 2.88A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0032 Score=65.51 Aligned_cols=155 Identities=11% Similarity=0.105 Sum_probs=110.7
Q ss_pred HHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhh-------hccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChh-
Q 004157 367 LPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVD-------EQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQR- 438 (771)
Q Consensus 367 ~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~-------~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~- 438 (771)
+| +..-+.+..|..|..-++.|..++......... ..+.+.+-.++.|+|..|++.++..+..++..+...
T Consensus 12 lp-l~e~l~sk~WK~R~eale~l~~~~~~~~~~~~~~~~~~~~~~~~~~lkk~l~DsN~~v~~~al~~l~~~~~~~~~~~ 90 (278)
T 4ffb_C 12 LP-LEERLTYKLWKARLEAYKELNQLFRNSVGDISRDDNIQIYWRDPTLFAQYITDSNVVAQEQAIVALNSLIDAFASSS 90 (278)
T ss_dssp CC-HHHHTTCSSHHHHHHHHHHHHHHHHTC----------CCTTSCTHHHHHHTTCSSHHHHHHHHHHHHHHHTTCC---
T ss_pred CC-HHHhcccCcHHHHHHHHHHHHHHHhhCcccccchhHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhhh
Confidence 55 445567889999999999998888766544322 235677788999999999999999999998876542
Q ss_pred -------HHhHHHHHHH-HhhccCCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCCcchhhheeee----
Q 004157 439 -------TISGSLLKYL-SKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL---- 506 (771)
Q Consensus 439 -------~l~~~LL~~l-aklq~D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R~a~l~a---- 506 (771)
..-..++|.| .|...|..+.+|..+.-|+..++..... ..+++..+. ..++...+.+|.+++..
T Consensus 91 ~~~~~~~~~~~~~l~~lveK~l~~~k~~~~~~a~~~l~~~~~~~~~---~~~~~e~l~-~~l~~Knpkv~~~~l~~l~~~ 166 (278)
T 4ffb_C 91 LKNAHNITLISTWTPLLVEKGLTSSRATTKTQSMSCILSLCGLDTS---ITQSVELVI-PFFEKKLPKLIAAAANCVYEL 166 (278)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHTSSS---SHHHHHHHG-GGGGCSCHHHHHHHHHHHHHH
T ss_pred cccchhHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHhcCc---HHHHHHHHH-HHHhccCHHHHHHHHHHHHHH
Confidence 2334566655 4667889999999999988888765442 234556666 67777777777776655
Q ss_pred --cc------------------------CCHHHHHHHHHHHHHHHH
Q 004157 507 --SY------------------------LNCDVRSKAFQAVDQFLQ 526 (771)
Q Consensus 507 --~~------------------------~~~~VR~~a~~~~~~~l~ 526 (771)
.| .++.||+.|.+++-.+..
T Consensus 167 l~~fg~~~~~~k~~l~~i~~~l~k~l~d~~~~VR~aA~~l~~~ly~ 212 (278)
T 4ffb_C 167 MAAFGLTNVNVQTFLPELLKHVPQLAGHGDRNVRSQTMNLIVEIYK 212 (278)
T ss_dssp HHHHTTTTCCHHHHHHHHGGGHHHHHTCSSHHHHHHHHHHHHHHHT
T ss_pred HHHhCCCcCCchhHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence 11 789999999998855543
|
| >4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A | Back alignment and structure |
|---|
Probab=97.18 E-value=0.0019 Score=63.49 Aligned_cols=139 Identities=17% Similarity=0.193 Sum_probs=103.4
Q ss_pred hhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhc---ChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChh--
Q 004157 364 VKVLPTIVKLFASNDRAIRVALLQHIDQYGQSF---SAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQR-- 438 (771)
Q Consensus 364 ~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l---~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~-- 438 (771)
..++|.|+.++...+..+|...+.-|-.+...- -...+...++|.++..+.+.++.+|+.++..+-.++..-.+.
T Consensus 53 ~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~ 132 (210)
T 4db6_A 53 AGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQ 132 (210)
T ss_dssp TTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred cCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHcCCHHHHH
Confidence 357899999999889988877777776665322 233555678999999999999999999999999988643322
Q ss_pred -HHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHH----hHHHHHHhhhcCCCcchhhhee
Q 004157 439 -TISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRV----LINAFTVRALRDTFSPARGAAK 504 (771)
Q Consensus 439 -~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~v----L~~af~~~~lkD~f~~~R~a~l 504 (771)
.+...+++.|.++..++++.+|.+++-+|+.|+..- ...+..+ .++.+. +.++++...+|..|+
T Consensus 133 ~~~~~~~i~~L~~ll~~~~~~v~~~a~~aL~~l~~~~-~~~~~~~~~~g~i~~L~-~ll~~~~~~v~~~a~ 201 (210)
T 4db6_A 133 AVIDAGALPALVQLLSSPNEQILQEALWALSNIASGG-NEQKQAVKEAGALEKLE-QLQSHENEKIQKEAQ 201 (210)
T ss_dssp HHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSC-HHHHHHHHHTTHHHHHH-HGGGCSCHHHHHHHH
T ss_pred HHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHHcCC-cHHHHHHHHCCCHHHHH-HHHhCCCHHHHHHHH
Confidence 345568899988888889999999999999999742 2333322 367777 778776655555444
|
| >3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B | Back alignment and structure |
|---|
Probab=97.18 E-value=0.0014 Score=75.01 Aligned_cols=167 Identities=18% Similarity=0.237 Sum_probs=130.3
Q ss_pred hhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcC---hhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCCh
Q 004157 361 EFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFS---AQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQ 437 (771)
Q Consensus 361 ef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~---~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~ 437 (771)
.....++|.|+++....|..++...+.-|..+...-. ...+...++|.++..+.+.+..+++.+++++-.++..-+.
T Consensus 247 ~~~~~~lp~L~~LL~~~~~~v~~~a~~aL~~l~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~a~~aL~nl~~~~~~ 326 (529)
T 3tpo_A 247 DAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDE 326 (529)
T ss_dssp HHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCHH
T ss_pred HHHhhHHHHHHHHhcCCcHHHHHHHHHHHHHhhhhhhhhHHHHHhccchHHHHHHhcCCChhHHHHHHHHHHHHHccchH
Confidence 4456789999999999999998877777776665433 2245677999999999999999999999999888753322
Q ss_pred ---hHHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHH----hHHHHHHhhhcCCCcchhhheeee----
Q 004157 438 ---RTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRV----LINAFTVRALRDTFSPARGAAKIL---- 506 (771)
Q Consensus 438 ---~~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~v----L~~af~~~~lkD~f~~~R~a~l~a---- 506 (771)
..+....++.|.++..++...||..++-+|+.|+..-. ..+..+ ++|.+. ..|+++...+|..|..+
T Consensus 327 ~~~~i~~~g~l~~L~~LL~~~~~~i~~~a~~aL~nl~~~~~-~~~~~v~~~g~i~~Lv-~lL~~~~~~v~~~A~~aL~nl 404 (529)
T 3tpo_A 327 QTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQ-DQIQQVVNHGLVPFLV-GVLSKADFKTQKAAAWAITNY 404 (529)
T ss_dssp HHHHHHHTTGGGGHHHHTTCSSHHHHHHHHHHHHHHHTSCH-HHHHHHHHTTHHHHHH-HHHHSSCHHHHHHHHHHHHHH
T ss_pred HHHHHhhcccHHHHHHHHcCCCHHHHHHHHHHHHHHhcccH-HHHHHHHhcCcHHHHH-HHhcCCCHHHHHHHHHHHHHH
Confidence 34556678889998888999999999999999986432 222222 478888 89999999999988776
Q ss_pred -c--------c----------------CCHHHHHHHHHHHHHHHHHHH
Q 004157 507 -S--------Y----------------LNCDVRSKAFQAVDQFLQIVK 529 (771)
Q Consensus 507 -~--------~----------------~~~~VR~~a~~~~~~~l~~l~ 529 (771)
. | ++.+|+..+..++..+++.-+
T Consensus 405 ~~~~~~~~~~~l~~~g~i~~L~~LL~~~d~~i~~~~L~aL~nil~~~~ 452 (529)
T 3tpo_A 405 TSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQAAE 452 (529)
T ss_dssp HHHSCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCCHHHHHHHHHCcCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhH
Confidence 0 0 788999999999888876543
|
| >1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1 | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00094 Score=77.99 Aligned_cols=157 Identities=13% Similarity=0.105 Sum_probs=112.7
Q ss_pred hHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHH
Q 004157 366 VLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLL 445 (771)
Q Consensus 366 i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL 445 (771)
..+.+++++.++|-..|-+.--.+..|.+. ..++.--+...|..-++|.++.+|..++++|..+.. ..+...|+
T Consensus 71 ~~~~vik~~~s~~~~~Krl~Yl~~~~~~~~--~~e~~~l~in~l~kDL~~~n~~vr~lAL~~L~~i~~----~~~~~~l~ 144 (618)
T 1w63_A 71 GQLECLKLIASQKFTDKRIGYLGAMLLLDE--RQDVHLLMTNCIKNDLNHSTQFVQGLALCTLGCMGS----SEMCRDLA 144 (618)
T ss_dssp GHHHHHHHHHSSSHHHHHHHHHHHHHHCCC--CHHHHHHHHHHHHHHHSCSSSHHHHHHHHHHHHHCC----HHHHHHHH
T ss_pred hHHHHHHHHcCCchHHHHHHHHHHHHHhCC--CcHHHHHHHHHHHHhcCCCCHhHHHHHHHHHHhcCC----HHHHHHHH
Confidence 566677888888876653332234444432 223333477888999999999999999999998873 45677889
Q ss_pred HHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCCcchhhheeee--cc--CCHHHHHHHHHHH
Q 004157 446 KYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL--SY--LNCDVRSKAFQAV 521 (771)
Q Consensus 446 ~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R~a~l~a--~~--~~~~VR~~a~~~~ 521 (771)
+.+.++..|+++.||.+++.|+++|...- .+.. +.+++.+. .+|.|+.+.++.+|+.+ .. .+++....-.+++
T Consensus 145 ~~l~~~L~~~~~~VRk~A~~al~~l~~~~-p~~v-~~~~~~l~-~lL~D~d~~V~~~Al~~L~~i~~~~~~~~~~~~~~v 221 (618)
T 1w63_A 145 GEVEKLLKTSNSYLRKKAALCAVHVIRKV-PELM-EMFLPATK-NLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKLV 221 (618)
T ss_dssp HHHHHHHHSCCHHHHHHHHHHHHHHHHHC-GGGG-GGGGGGTT-TSTTCCCHHHHHHHHHHHHHHCCSHHHHHHHHHTTH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHC-hHHH-HHHHHHHH-HHhCCCCHhHHHHHHHHHHHHHHhChHHHHHHHHHH
Confidence 99999999999999999999999999853 3332 35678888 89999999999999888 22 2333222223455
Q ss_pred HHHHHHHHHH
Q 004157 522 DQFLQIVKQY 531 (771)
Q Consensus 522 ~~~l~~l~~~ 531 (771)
..+++.|+..
T Consensus 222 ~~l~~~L~~~ 231 (618)
T 1w63_A 222 PQLVRILKNL 231 (618)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6666666654
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=97.17 E-value=0.0029 Score=66.92 Aligned_cols=66 Identities=6% Similarity=-0.056 Sum_probs=42.7
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCC---CeeEEeeeEEecccCcCCcccE
Q 004157 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHP---NILAFLHSTEVENIDATSTKIT 101 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHP---nIlkv~d~~e~e~~d~~~~~~~ 101 (771)
.++.|. . .+|.. |..+.+|+.. .......+.+|++.|+.|++. .|.+++.+.... ...
T Consensus 26 ~l~~G~~n--~v~~v-----g~~~VlR~~~----~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~-------~g~ 87 (306)
T 3tdw_A 26 SLGEGFRN--YAILV-----NGDWVFRFPK----SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRS-------DGN 87 (306)
T ss_dssp EEEECSSE--EEEEE-----TTTEEEEEES----SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECT-------TSC
T ss_pred ecCCCcce--eEEEE-----CCEEEEEecC----CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccC-------CCc
Confidence 344444 3 66766 5788888853 123456788999999999753 245555555422 124
Q ss_pred EEEEecCC
Q 004157 102 IYIVTEPV 109 (771)
Q Consensus 102 iyIVtE~v 109 (771)
.|+|||++
T Consensus 88 ~~~v~e~i 95 (306)
T 3tdw_A 88 PFVGYRKV 95 (306)
T ss_dssp EEEEEECC
T ss_pred eEEEEecc
Confidence 68999999
|
| >1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16 | Back alignment and structure |
|---|
Probab=97.16 E-value=7.9e-05 Score=68.56 Aligned_cols=119 Identities=13% Similarity=0.087 Sum_probs=80.9
Q ss_pred hhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHh
Q 004157 362 FSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTIS 441 (771)
Q Consensus 362 f~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~ 441 (771)
+...-.+.+..++.++|+.+|...+..|-.+ ... -+|.|+..+.|.++.||..++.++-.+..
T Consensus 9 ~~~~~~~~l~~~L~~~~~~vR~~A~~~L~~~----~~~-----~~~~L~~~L~d~~~~vR~~A~~aL~~~~~-------- 71 (131)
T 1te4_A 9 HHSSGLVPRGSHMADENKWVRRDVSTALSRM----GDE-----AFEPLLESLSNEDWRIRGAAAWIIGNFQD-------- 71 (131)
T ss_dssp ------------CCSSCCCSSSSCCSSTTSC----SST-----THHHHHHGGGCSCHHHHHHHHHHHGGGCS--------
T ss_pred cccccHHHHHHHhcCCCHHHHHHHHHHHHHh----Cch-----HHHHHHHHHcCCCHHHHHHHHHHHHhcCC--------
Confidence 3444567788888888888887776555433 221 25899999999999999999999876642
Q ss_pred HHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCCcchhhheeee
Q 004157 442 GSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 442 ~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R~a~l~a 506 (771)
.+.++.|.++..|+++.||..++..|++|.. .-.++.+. ..|+|+...+|.+++.+
T Consensus 72 ~~a~~~L~~~L~d~~~~VR~~A~~aL~~~~~--------~~a~~~L~-~~l~d~~~~vr~~A~~a 127 (131)
T 1te4_A 72 ERAVEPLIKLLEDDSGFVRSGAARSLEQIGG--------ERVRAAME-KLAETGTGFARKVAVNY 127 (131)
T ss_dssp HHHHHHHHHHHHHCCTHHHHHHHHHHHHHCS--------HHHHHHHH-HHTTSCCTHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHhCc--------HHHHHHHH-HHHhCCCHHHHHHHHHH
Confidence 2345556566679999999999999999862 23467777 78999998888887654
|
| >4ffb_C Protein STU2; tubulin fold, heat repeats, cytoskeleton, microtubule, tubul domain, hydrolase; HET: GTP; 2.88A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0026 Score=66.19 Aligned_cols=113 Identities=16% Similarity=0.096 Sum_probs=87.8
Q ss_pred hhhhhHHHHH-HhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhH-
Q 004157 362 FSVKVLPTIV-KLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRT- 439 (771)
Q Consensus 362 f~~~i~P~i~-~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~- 439 (771)
+...++|.|+ +++.+....+|-..++-+-.++..... .+.++..++.++...+|.+|.+++..|..++..++...
T Consensus 99 ~~~~~l~~lveK~l~~~k~~~~~~a~~~l~~~~~~~~~---~~~~~e~l~~~l~~Knpkv~~~~l~~l~~~l~~fg~~~~ 175 (278)
T 4ffb_C 99 LISTWTPLLVEKGLTSSRATTKTQSMSCILSLCGLDTS---ITQSVELVIPFFEKKLPKLIAAAANCVYELMAAFGLTNV 175 (278)
T ss_dssp HHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHTSSS---SHHHHHHHGGGGGCSCHHHHHHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHhcCc---HHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHhCCCcC
Confidence 3455677665 567788888888878877777776554 34467888999999999999999999999887765543
Q ss_pred ----HhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcc
Q 004157 440 ----ISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEG 477 (771)
Q Consensus 440 ----l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~ 477 (771)
....+++.+.++..|.++.||..+.-|++.|-.++|..
T Consensus 176 ~~k~~l~~i~~~l~k~l~d~~~~VR~aA~~l~~~ly~~~G~~ 217 (278)
T 4ffb_C 176 NVQTFLPELLKHVPQLAGHGDRNVRSQTMNLIVEIYKVTGNN 217 (278)
T ss_dssp CHHHHHHHHGGGHHHHHTCSSHHHHHHHHHHHHHHHTC----
T ss_pred CchhHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhCcc
Confidence 34467788899999999999999999999999999864
|
| >3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ... | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0036 Score=71.18 Aligned_cols=167 Identities=17% Similarity=0.232 Sum_probs=128.8
Q ss_pred hhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcCh---hhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCCh
Q 004157 361 EFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSA---QVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQ 437 (771)
Q Consensus 361 ef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~---~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~ 437 (771)
.....++|.|+++....|..++...+.-|..+.+.-.. ..+...++|.++..+.+.+..+|+.+++.+-.++..-+.
T Consensus 228 ~~~~~~lp~L~~LL~~~~~~v~~~A~~aL~~L~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~al~aL~nl~~~~~~ 307 (510)
T 3ul1_B 228 DAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDE 307 (510)
T ss_dssp HHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCHH
T ss_pred HHHHhHHHHHHHHHhcCCHHHHHHHHHHHHHHhhchhhhHHHHHhcccchhhhhhhcCCChhhhhHHHHHHHHhhcCCHH
Confidence 34467899999999999999998887777777654332 245667999999999999999999999999888754333
Q ss_pred ---hHHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHH----hHHHHHHhhhcCCCcchhhheeee----
Q 004157 438 ---RTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRV----LINAFTVRALRDTFSPARGAAKIL---- 506 (771)
Q Consensus 438 ---~~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~v----L~~af~~~~lkD~f~~~R~a~l~a---- 506 (771)
..+....++.|.++-.++...||..++-+|+.|+..-. ..+..+ ++|.+. ..|++....+|..|..+
T Consensus 308 ~~~~i~~~g~l~~L~~LL~~~~~~v~~~A~~aL~nl~a~~~-~~~~~v~~~g~i~~Lv-~lL~~~~~~v~~~Aa~aL~Nl 385 (510)
T 3ul1_B 308 QTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQ-DQIQQVVNHGLVPFLV-GVLSKADFKTQKEAAWAITNY 385 (510)
T ss_dssp HHHHHHHTTGGGGCC-CTTCSSHHHHHHHHHHHHHHTTSCH-HHHHHHHHTTHHHHHH-HHHHSSCHHHHHHHHHHHHHH
T ss_pred HHHHHhhccchHHHHHHhcCCCHHHHHHHHHHHHHHHcCcH-HHHHHHHhcCCHHHHH-HHHcCCCHHHHHHHHHHHHHH
Confidence 23455677888888888899999999999999986422 222322 478888 89999999999988777
Q ss_pred -c--------c----------------CCHHHHHHHHHHHHHHHHHHH
Q 004157 507 -S--------Y----------------LNCDVRSKAFQAVDQFLQIVK 529 (771)
Q Consensus 507 -~--------~----------------~~~~VR~~a~~~~~~~l~~l~ 529 (771)
. | ++.+|+..+.+++..+++.-+
T Consensus 386 ~~~~~~~~~~~L~~~g~i~~L~~LL~~~d~~i~~~~L~aL~nil~~~~ 433 (510)
T 3ul1_B 386 TSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQAAE 433 (510)
T ss_dssp HHHCCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHH
T ss_pred HccCCHHHHHHHHHCCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhH
Confidence 0 0 788999999999888876443
|
| >1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0056 Score=64.61 Aligned_cols=139 Identities=13% Similarity=0.137 Sum_probs=108.0
Q ss_pred hHHHHHH-hhcCCcHHHHHHHHHhHHHHHhh---cChhhhhhccHHHHHhhcC-CCcHHHHHHHHHHHHhhccCCCh---
Q 004157 366 VLPTIVK-LFASNDRAIRVALLQHIDQYGQS---FSAQVVDEQVYPHVATGFA-DTSAFLREMTLKSMLVLAPKLSQ--- 437 (771)
Q Consensus 366 i~P~i~~-lF~~~Dr~iR~~LL~~l~~~~~~---l~~~~v~~~I~p~l~~gf~-D~~~~iRe~tlk~i~~l~~kL~~--- 437 (771)
.+|.++. +..+++..+|...+.-+-.++.. .....+....+|.|+..+. +.+..+|+.++.+|..++..-..
T Consensus 82 ~l~~Lv~~lL~s~~~~vr~~Aa~~Lg~ia~~n~~~~~~vv~~g~l~~Ll~LL~~~~~~~v~~~A~~ALsnl~~~~~~~~~ 161 (296)
T 1xqr_A 82 GMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLL 161 (296)
T ss_dssp HHHHHHHTTTTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred CHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcCCcHHHH
Confidence 3677777 88888888887777777666643 3344667778999999998 46899999999999998854333
Q ss_pred hHHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHHh----HHHHHHhhhcCCCcchhhheeee
Q 004157 438 RTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVL----INAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 438 ~~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~vL----~~af~~~~lkD~f~~~R~a~l~a 506 (771)
..+....++.|.++..+.+..+|.+++-+|+.|+.. +.+.+..++ ++.+. ..|+.+...+|..++.+
T Consensus 162 ~~~~~ggi~~L~~lL~~~d~~v~~~A~~aLs~L~~~-~~~~~~~vv~~g~i~~Lv-~LL~~~d~~v~~~al~a 232 (296)
T 1xqr_A 162 QFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVG-HPEHKGTLCSMGMVQQLV-ALVRTEHSPFHEHVLGA 232 (296)
T ss_dssp HHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHH-CGGGHHHHHHTTHHHHHH-HHHTSCCSTHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhC-ChHHHHHHHHcCCHHHHH-HHHcCCChhHHHHHHHH
Confidence 233446788888888888999999999999999987 444544443 67777 89999999999999988
|
| >1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1 | Back alignment and structure |
|---|
Probab=96.61 E-value=0.021 Score=66.58 Aligned_cols=131 Identities=17% Similarity=0.198 Sum_probs=100.7
Q ss_pred hhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHH
Q 004157 361 EFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTI 440 (771)
Q Consensus 361 ef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l 440 (771)
+........+..+..+.|..+|+..|..|..++.+-+ +.+. ..++.++..+.|.+..||..++..+..++..=+-..+
T Consensus 309 ~l~~~a~~~L~~~L~~~d~~vr~~aL~~L~~i~~~~p-~~~~-~~~~~i~~~l~d~d~~Ir~~alelL~~l~~~~nv~~i 386 (618)
T 1w63_A 309 GLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDH-NAVQ-RHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNIRGM 386 (618)
T ss_dssp HHHHHHHHHHHHHHTCSSTTTHHHHHHHHHHHHHHHH-HHHG-GGHHHHHHGGGSSCHHHHHHHHHHHHHHCCSSSTHHH
T ss_pred HHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHhhCH-HHHH-HHHHHHHHHccCCChhHHHHHHHHHHHHcccccHHHH
Confidence 3334567788888888999999999999999998643 3343 3677889999999999999999999999887666666
Q ss_pred hHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCCcchh
Q 004157 441 SGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPAR 500 (771)
Q Consensus 441 ~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R 500 (771)
..+|+.++. +.+..+|..++.+|++||....... .. .++.+. ..|++.-..++
T Consensus 387 v~eL~~~l~----~~d~e~r~~~v~~I~~la~k~~~~~-~~-~v~~ll-~lL~~~~~~v~ 439 (618)
T 1w63_A 387 MKELLYFLD----SCEPEFKADCASGIFLAAEKYAPSK-RW-HIDTIM-RVLTTAGSYVR 439 (618)
T ss_dssp HHHHHHHHH----HCCHHHHHHHHHHHHHHHHSSCCCH-HH-HHHHHH-HHHHHTGGGSC
T ss_pred HHHHHHHHH----hCCHHHHHHHHHHHHHHHHHhCccH-HH-HHHHHH-HHHHhccchhH
Confidence 777777775 4678999999999999999876443 22 355666 67776543333
|
| >2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0029 Score=73.84 Aligned_cols=133 Identities=13% Similarity=0.105 Sum_probs=103.2
Q ss_pred hHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHH
Q 004157 366 VLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLL 445 (771)
Q Consensus 366 i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL 445 (771)
..+.+++++.++|-..|-+.--.+..|.+. .++ +---+...+.+.++|.++.+|..+|++|..+.. ..+...|+
T Consensus 75 ~~~~vvkl~~s~~~~~Krl~YL~l~~~~~~-~~e-~~~L~iN~l~kDl~~~n~~ir~lALr~L~~i~~----~e~~~~l~ 148 (621)
T 2vgl_A 75 GHMEAVNLLSSNRYTEKQIGYLFISVLVNS-NSE-LIRLINNAIKNDLASRNPTFMGLALHCIANVGS----REMAEAFA 148 (621)
T ss_dssp CHHHHHHGGGCSCHHHHHHHHHHHHHSCCC-CHH-HHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHCC----HHHHHHHT
T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHHHHccC-CcH-HHHHHHHHHHHhcCCCCHHHHHHHHHHhhccCC----HHHHHHHH
Confidence 467788899998877764444444444432 222 223467788899999999999999999998853 55788999
Q ss_pred HHHHhhc--cCCCCcchhhHHHHHHHhhhccCcch-hhHHhHHHHHHhhhcCCCcchhhheeee
Q 004157 446 KYLSKLQ--VDEEPAIRTNTTILLGNIASHLNEGT-RKRVLINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 446 ~~laklq--~D~~~~IRtnt~icl~kia~~L~~~~-~~~vL~~af~~~~lkD~f~~~R~a~l~a 506 (771)
+.+.++. .|..+.||-++++|+.+|... .++. +..-+++.+. ++|.|+.+.++.+|+.+
T Consensus 149 ~~v~~~l~~~d~~~~VRK~A~~al~kl~~~-~p~~~~~~~~~~~l~-~lL~d~d~~V~~~a~~~ 210 (621)
T 2vgl_A 149 GEIPKILVAGDTMDSVKQSAALCLLRLYRT-SPDLVPMGDWTSRVV-HLLNDQHLGVVTAATSL 210 (621)
T ss_dssp THHHHHHHCSSSCHHHHHHHHHHHHHHHHH-CGGGCCCCSCHHHHH-HHTTCSCHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCHHHHHHHHHHHHHHHHh-ChhhcCchhHHHHHH-HHhCCCCccHHHHHHHH
Confidence 9999998 899999999999999999984 4443 2235788888 89999999999999887
|
| >2of3_A ZYG-9; multifunctional macromolecule, kinetochore, microtubule, XMAP215, STU2, DIS1, microtubule associated protein, structural protein; 1.90A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=96.49 E-value=0.014 Score=60.39 Aligned_cols=114 Identities=10% Similarity=0.079 Sum_probs=90.3
Q ss_pred hhhh-hhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChh
Q 004157 360 EEFS-VKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQR 438 (771)
Q Consensus 360 eef~-~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~ 438 (771)
.+|. ..++|.|+.-.+.+.-.+|-..-+-+..+..-.++ .+||+.++.||.+.|...|++++.-|..+++.-+-.
T Consensus 126 ~~~ea~~~lP~LveKlGd~k~~vR~~~r~il~~l~~v~~~----~~v~~~l~~g~ksKN~R~R~e~l~~l~~li~~~G~~ 201 (266)
T 2of3_A 126 SQEEVSAFVPYLLLKTGEAKDNMRTSVRDIVNVLSDVVGP----LKMTPMLLDALKSKNARQRSECLLVIEYYITNAGIS 201 (266)
T ss_dssp CHHHHHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHHCH----HHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHCSG
T ss_pred hHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHCCH----HHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhcCCC
Confidence 3443 56789988877887777776655555555444454 358899999999999999999999999999887766
Q ss_pred HHhHHHH---HHHHhhccCCCCcchhhHHHHHHHhhhccCcchh
Q 004157 439 TISGSLL---KYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTR 479 (771)
Q Consensus 439 ~l~~~LL---~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~ 479 (771)
. ...| |.++++..|.+..||..+.-|+..+-.+.|..-+
T Consensus 202 ~--~~~l~~~~~ia~ll~D~d~~VR~aAl~~lve~y~~~Gd~v~ 243 (266)
T 2of3_A 202 P--LKSLSVEKTVAPFVGDKDVNVRNAAINVLVACFKFEGDQMW 243 (266)
T ss_dssp G--GGGGCHHHHHGGGGGCSSHHHHHHHHHHHHHHHHHHTTHHH
T ss_pred c--cccccchHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhHHHH
Confidence 3 3467 9999999999999999999999988888776543
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=96.39 E-value=0.019 Score=60.68 Aligned_cols=31 Identities=13% Similarity=0.151 Sum_probs=28.1
Q ss_pred CCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 147 DCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 147 ~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
...++|||+++.||+++.++.+.|+||+.+.
T Consensus 221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp SCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred cCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 4689999999999999888899999999874
|
| >1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16 | Back alignment and structure |
|---|
Probab=96.29 E-value=0.0047 Score=56.43 Aligned_cols=88 Identities=17% Similarity=0.174 Sum_probs=70.9
Q ss_pred HHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHHH
Q 004157 367 LPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLK 446 (771)
Q Consensus 367 ~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL~ 446 (771)
+|.|.+++.++|+.||...+.-|-.+. . ...+|.+...+.|.++.||..++.++-.+.. .+.++
T Consensus 44 ~~~L~~~L~d~~~~vR~~A~~aL~~~~----~----~~a~~~L~~~L~d~~~~VR~~A~~aL~~~~~--------~~a~~ 107 (131)
T 1te4_A 44 FEPLLESLSNEDWRIRGAAAWIIGNFQ----D----ERAVEPLIKLLEDDSGFVRSGAARSLEQIGG--------ERVRA 107 (131)
T ss_dssp HHHHHHGGGCSCHHHHHHHHHHHGGGC----S----HHHHHHHHHHHHHCCTHHHHHHHHHHHHHCS--------HHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHhcC----C----HHHHHHHHHHHcCCCHHHHHHHHHHHHHhCc--------HHHHH
Confidence 488889999999999998887655443 2 2468889999999999999999999987652 34566
Q ss_pred HHHhhccCCCCcchhhHHHHHHHh
Q 004157 447 YLSKLQVDEEPAIRTNTTILLGNI 470 (771)
Q Consensus 447 ~laklq~D~~~~IRtnt~icl~ki 470 (771)
.|.++..|+++.||..++.+|++|
T Consensus 108 ~L~~~l~d~~~~vr~~A~~aL~~i 131 (131)
T 1te4_A 108 AMEKLAETGTGFARKVAVNYLETH 131 (131)
T ss_dssp HHHHHTTSCCTHHHHHHHHHGGGC
T ss_pred HHHHHHhCCCHHHHHHHHHHHHhC
Confidence 777777799999999999998875
|
| >1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* | Back alignment and structure |
|---|
Probab=96.24 E-value=0.013 Score=61.90 Aligned_cols=147 Identities=10% Similarity=0.085 Sum_probs=107.5
Q ss_pred HHHHHHHHhHHHHHhhcChh--hhhhccHHHHHh-hcCCCcHHHHHHHHHHHHhhccC---CChhHHhHHHHHHHHhhcc
Q 004157 380 AIRVALLQHIDQYGQSFSAQ--VVDEQVYPHVAT-GFADTSAFLREMTLKSMLVLAPK---LSQRTISGSLLKYLSKLQV 453 (771)
Q Consensus 380 ~iR~~LL~~l~~~~~~l~~~--~v~~~I~p~l~~-gf~D~~~~iRe~tlk~i~~l~~k---L~~~~l~~~LL~~laklq~ 453 (771)
.-|...|+.|..+++..+.. .+.--.+|.++. .+.+.++.||+.++..+-.++.. .....+....+|.|.++..
T Consensus 55 e~k~~Al~~L~~lv~~~dna~~~~~~G~l~~Lv~~lL~s~~~~vr~~Aa~~Lg~ia~~n~~~~~~vv~~g~l~~Ll~LL~ 134 (296)
T 1xqr_A 55 QEREGALELLADLCENMDNAADFCQLSGMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLD 134 (296)
T ss_dssp HHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHTTTTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhChhhHHHHHHcCCHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHc
Confidence 46788888888888876532 344557899999 99999999999999999988853 2333455567777777665
Q ss_pred -CCCCcchhhHHHHHHHhhhccCcc---hhhHHhHHHHHHhhhcCCCcchhhheeee-cc--------------------
Q 004157 454 -DEEPAIRTNTTILLGNIASHLNEG---TRKRVLINAFTVRALRDTFSPARGAAKIL-SY-------------------- 508 (771)
Q Consensus 454 -D~~~~IRtnt~icl~kia~~L~~~---~~~~vL~~af~~~~lkD~f~~~R~a~l~a-~~-------------------- 508 (771)
++...||.+++-+|+.|+..-... -...-.++.+. +.|+++...+|..+..+ .|
T Consensus 135 ~~~~~~v~~~A~~ALsnl~~~~~~~~~~~~~~ggi~~L~-~lL~~~d~~v~~~A~~aLs~L~~~~~~~~~~vv~~g~i~~ 213 (296)
T 1xqr_A 135 RDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLM-RAMQQQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQ 213 (296)
T ss_dssp HCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHH-HHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHTTHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHHHH-HHHcCCCHHHHHHHHHHHHHHHhCChHHHHHHHHcCCHHH
Confidence 668899999999999998643221 11122478888 89999888888877766 11
Q ss_pred -------CCHHHHHHHHHHHHHHHHH
Q 004157 509 -------LNCDVRSKAFQAVDQFLQI 527 (771)
Q Consensus 509 -------~~~~VR~~a~~~~~~~l~~ 527 (771)
++..||..|..++..++..
T Consensus 214 Lv~LL~~~d~~v~~~al~aL~~l~~~ 239 (296)
T 1xqr_A 214 LVALVRTEHSPFHEHVLGALCSLVTD 239 (296)
T ss_dssp HHHHHTSCCSTHHHHHHHHHHHHHTT
T ss_pred HHHHHcCCChhHHHHHHHHHHHHHhC
Confidence 6777888888877665543
|
| >2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.05 E-value=0.16 Score=59.12 Aligned_cols=141 Identities=13% Similarity=0.071 Sum_probs=87.2
Q ss_pred hhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcC---hhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhcc--------
Q 004157 365 KVLPTIVKLFASNDRAIRVALLQHIDQYGQSFS---AQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAP-------- 433 (771)
Q Consensus 365 ~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~---~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~-------- 433 (771)
-++|.|+.+....+..+|...+.-|..+...-+ ...+...++|.++..+.+.++.++..++..+..++-
T Consensus 98 g~i~~Lv~lL~~~~~~v~~~A~~aL~nL~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~~La~~~~~~~~~ 177 (644)
T 2z6h_A 98 GGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLI 177 (644)
T ss_dssp THHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred CCHHHHHHHHhCCCHHHHHHHHHHHHHHHhCcchhHHHHHHCCChHHHHHHHCcCCHHHHHHHHHHHHHHHhcCcHHHHH
Confidence 356666666666666666555555555544322 122344566666666666665555544333333221
Q ss_pred -----------------------------------CCC--hhHHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCc
Q 004157 434 -----------------------------------KLS--QRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNE 476 (771)
Q Consensus 434 -----------------------------------kL~--~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~ 476 (771)
.-. ...+....++.|.++..+.+..+|.+++-+|..|+..-..
T Consensus 178 i~~~g~v~~Lv~lL~~~~~~~~~~~a~~~L~nLs~~~~~~~~l~~~g~l~~L~~ll~~~~~~~~~~a~~~L~nL~~~~~~ 257 (644)
T 2z6h_A 178 ILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATK 257 (644)
T ss_dssp HHHTTHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTCTTHHHHHHHTTHHHHHHTTTTCSCHHHHHHHHHHHHHHGGGCTT
T ss_pred HHHcCChHHHHHHHHcCChHHHHHHHHHHHHHHhcCcccHHHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHhhcchh
Confidence 101 1122334577777777777889999999999999876544
Q ss_pred chhhHHhHHHHHHhhhcCCCcchhhheeee
Q 004157 477 GTRKRVLINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 477 ~~~~~vL~~af~~~~lkD~f~~~R~a~l~a 506 (771)
....+-+++.+. +.|++....+|..+..+
T Consensus 258 ~~~~~~~i~~Lv-~lL~~~d~~v~~~a~~a 286 (644)
T 2z6h_A 258 QEGMEGLLGTLV-QLLGSDDINVVTCAAGI 286 (644)
T ss_dssp CCSCHHHHHHHH-HHTTCSCHHHHHHHHHH
T ss_pred hhhhhhHHHHHH-HHHcCCCHHHHHHHHHH
Confidence 333345688888 89999999999888776
|
| >2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A | Back alignment and structure |
|---|
Probab=95.97 E-value=0.026 Score=65.84 Aligned_cols=161 Identities=16% Similarity=0.166 Sum_probs=118.3
Q ss_pred hhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhc--CCCcHHHHHHHHHHHHhhccCCCh
Q 004157 360 EEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGF--ADTSAFLREMTLKSMLVLAPKLSQ 437 (771)
Q Consensus 360 eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf--~D~~~~iRe~tlk~i~~l~~kL~~ 437 (771)
.|..-.++..|.+-+.+++.-+|-..|.-|..+.. .++-+.+.|.+..++ .|.++.||..++-++..+..+ +.
T Consensus 106 ~e~~~L~iN~l~kDl~~~n~~ir~lALr~L~~i~~----~e~~~~l~~~v~~~l~~~d~~~~VRK~A~~al~kl~~~-~p 180 (621)
T 2vgl_A 106 SELIRLINNAIKNDLASRNPTFMGLALHCIANVGS----REMAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRT-SP 180 (621)
T ss_dssp HHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHCC----HHHHHHHTTHHHHHHHCSSSCHHHHHHHHHHHHHHHHH-CG
T ss_pred cHHHHHHHHHHHHhcCCCCHHHHHHHHHHhhccCC----HHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHh-Ch
Confidence 45556678888888999999999999988877743 446677999999999 999999999999999999874 44
Q ss_pred hHHh-HHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhc-------------------CCCc
Q 004157 438 RTIS-GSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALR-------------------DTFS 497 (771)
Q Consensus 438 ~~l~-~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lk-------------------D~f~ 497 (771)
..+. +.+++.|.++-.|.++.|+.+++..|..|++.=.... .-++|.+. +.|+ ||+.
T Consensus 181 ~~~~~~~~~~~l~~lL~d~d~~V~~~a~~~l~~i~~~~~~~~--~~~~~~~~-~~L~~ll~~~~~~~~~~~~~~~~~~w~ 257 (621)
T 2vgl_A 181 DLVPMGDWTSRVVHLLNDQHLGVVTAATSLITTLAQKNPEEF--KTSVSLAV-SRLSRIVTSASTDLQDYTYYFVPAPWL 257 (621)
T ss_dssp GGCCCCSCHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCHHHH--TTHHHHHH-HHHHHHHHCCSSSCSTTEETTEESHHH
T ss_pred hhcCchhHHHHHHHHhCCCCccHHHHHHHHHHHHHHhChHHH--HHHHHHHH-HHHHHHHhCCCCCccchhhcCCCCchH
Confidence 4433 3688889998899999999999999999987532211 11333333 3222 5666
Q ss_pred chhhheeeecc---CCHHHHHHHHHHHHHHHHHH
Q 004157 498 PARGAAKILSY---LNCDVRSKAFQAVDQFLQIV 528 (771)
Q Consensus 498 ~~R~a~l~a~~---~~~~VR~~a~~~~~~~l~~l 528 (771)
.+++--+.+.| .++..++.-.+.++.++..+
T Consensus 258 qi~il~ll~~~~~~~d~~~~~~l~~~L~~il~~~ 291 (621)
T 2vgl_A 258 SVKLLRLLQCYPPPEDPAVRGRLTECLETILNKA 291 (621)
T ss_dssp HHHHHHHGGGSSSCSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhh
Confidence 66666666655 35777777777777777654
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=95.94 E-value=0.03 Score=61.83 Aligned_cols=30 Identities=27% Similarity=0.263 Sum_probs=27.1
Q ss_pred CCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 147 DCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 147 ~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
...++|||+++.||+++.++ ++|+||+++.
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~ 260 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSF 260 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCE
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccc
Confidence 46899999999999999877 9999999875
|
| >2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} | Back alignment and structure |
|---|
Probab=95.76 E-value=0.019 Score=68.72 Aligned_cols=197 Identities=14% Similarity=0.046 Sum_probs=126.1
Q ss_pred hhhhhhHHHHHHHHhcCCC--CchhhHHHHHhccCCChhhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcC---h
Q 004157 324 IVLKKLLPLLASALEFGSA--AAPALTALLKMGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFS---A 398 (771)
Q Consensus 324 ~~~~kILP~Ll~~~~~~~~--~~~~L~~ll~i~~~l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~---~ 398 (771)
++...++|.|+..+..... ...++..+..++......+-...++|.|++++...|+.+|...+.-|..+...-+ .
T Consensus 356 i~~~g~l~~Ll~lL~~~~~~~~~~a~~~L~~L~~~~~~~~~~~~~i~~Lv~lL~~~d~~vr~~A~~aL~~L~~~~~~~~~ 435 (780)
T 2z6g_A 356 IVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKM 435 (780)
T ss_dssp HHHTTHHHHHGGGTTCSCHHHHHHHHHHHHHHHTTCTTCSCCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHH
T ss_pred HHHhchHHHHHHHHcCCchHHHHHHHHHHHHHhccchhhhhhhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHH
Confidence 3344456777766553321 1122333444544443333345689999999999999999887777766655321 2
Q ss_pred hhhhhccHHHHHhhcCCC-c-HHHHHHHHHHHHhhccCCCh------hHHhHHHHHHHHhhccCCCC-cchhhHHHHHHH
Q 004157 399 QVVDEQVYPHVATGFADT-S-AFLREMTLKSMLVLAPKLSQ------RTISGSLLKYLSKLQVDEEP-AIRTNTTILLGN 469 (771)
Q Consensus 399 ~~v~~~I~p~l~~gf~D~-~-~~iRe~tlk~i~~l~~kL~~------~~l~~~LL~~laklq~D~~~-~IRtnt~icl~k 469 (771)
..+....+|.++..+.+. + ..+|+.++.++-.|+..-.+ ..+....++.|.++..++.. .||..++-+|+.
T Consensus 436 ~i~~~g~i~~Lv~lL~~~~~~~~v~~~Al~aL~nL~~~~~~~~~~~~~v~~~~~l~~L~~lL~~~~~~~v~~~A~~aL~n 515 (780)
T 2z6g_A 436 MVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQDAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRN 515 (780)
T ss_dssp HHHTTTHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSSTTHHHHHHHHHHTTCHHHHHHTTSTTCCHHHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHccCCHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHcCCHHHHHHHhcCCChHHHHHHHHHHHHH
Confidence 234456789999998763 3 48999999999988765433 22344567888887776654 999999999999
Q ss_pred hhhccCcchhhH----HhHHHHHHhhhcCCCcchhhheeee--c--c----CCHHHHHHHHHHHHH
Q 004157 470 IASHLNEGTRKR----VLINAFTVRALRDTFSPARGAAKIL--S--Y----LNCDVRSKAFQAVDQ 523 (771)
Q Consensus 470 ia~~L~~~~~~~----vL~~af~~~~lkD~f~~~R~a~l~a--~--~----~~~~VR~~a~~~~~~ 523 (771)
|+. +...+.. -+++.+. +.|++....+|..+..+ . | ...+||..|-.++..
T Consensus 516 La~--~~~~~~~i~~~g~i~~Lv-~lL~~~~~~~~~~aa~al~nq~~~~~~~~~~v~~~a~~aL~~ 578 (780)
T 2z6g_A 516 LAL--CPANHAPLREQGAIPRLV-QLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEACTGALHI 578 (780)
T ss_dssp HHS--SHHHHHHHHHTTHHHHHH-HHHHHHHHHHHHTTC------CCSTTCCHHHHHHHHHHHHHH
T ss_pred Hhc--CHHHHHHHHHCCCHHHHH-HHHHhcchhHHHHHhhccccchhhcccChHHHHHHHHHHHHH
Confidence 995 3333332 2478888 88988777777655443 1 2 234566555555544
|
| >2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.70 E-value=0.036 Score=64.68 Aligned_cols=196 Identities=14% Similarity=0.055 Sum_probs=127.7
Q ss_pred hhhhhhHHHHHHHHhcCCC--CchhhHHHHHhccCCChhhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhc---Ch
Q 004157 324 IVLKKLLPLLASALEFGSA--AAPALTALLKMGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSF---SA 398 (771)
Q Consensus 324 ~~~~kILP~Ll~~~~~~~~--~~~~L~~ll~i~~~l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l---~~ 398 (771)
++...++|.|++.+..... ...++..+..++..-...+....++|.|++++...|..+|...+.-|..+...- -.
T Consensus 220 l~~~g~l~~L~~ll~~~~~~~~~~a~~~L~nL~~~~~~~~~~~~~i~~Lv~lL~~~d~~v~~~a~~aL~~L~~~~~~~~~ 299 (644)
T 2z6h_A 220 IVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKM 299 (644)
T ss_dssp HHHTTHHHHHHTTTTCSCHHHHHHHHHHHHHHGGGCTTCCSCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHhhcchhhhhhhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHH
Confidence 3444567777776654321 112233333444443334445678999999999999999987776666665432 12
Q ss_pred hhhhhccHHHHHhhcCCCc--HHHHHHHHHHHHhhccCCChh------HHhHHHHHHHHhhccCCC-CcchhhHHHHHHH
Q 004157 399 QVVDEQVYPHVATGFADTS--AFLREMTLKSMLVLAPKLSQR------TISGSLLKYLSKLQVDEE-PAIRTNTTILLGN 469 (771)
Q Consensus 399 ~~v~~~I~p~l~~gf~D~~--~~iRe~tlk~i~~l~~kL~~~------~l~~~LL~~laklq~D~~-~~IRtnt~icl~k 469 (771)
..+....+|.++..+.+.. +.+|+.++.++..++..-.+. .+....++.|.++-.++. ..||..++-+|+.
T Consensus 300 ~v~~~g~v~~Lv~lL~~~~~~~~v~~~a~~aL~nL~~~~~~~~~~q~~v~~~~~l~~L~~lL~~~~~~~v~~~a~~~L~n 379 (644)
T 2z6h_A 300 MVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRN 379 (644)
T ss_dssp HHHHTTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSSTTHHHHHHHHHHTTHHHHHHHTTSTTCCHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHccCCcHHHHHHHHHHHHHHhcCCchHHHHHHHHHHccChHHHHHHhCccCchHHHHHHHHHHHH
Confidence 3445567899999888643 799999999999998654321 334467888888777654 6999999999999
Q ss_pred hhhccCcchhhHH----hHHHHHHhhhcCCCcchhhheeee--c--c----CCHHHHHHHHHHHH
Q 004157 470 IASHLNEGTRKRV----LINAFTVRALRDTFSPARGAAKIL--S--Y----LNCDVRSKAFQAVD 522 (771)
Q Consensus 470 ia~~L~~~~~~~v----L~~af~~~~lkD~f~~~R~a~l~a--~--~----~~~~VR~~a~~~~~ 522 (771)
|+.. ...+..+ +++.+. +.|++....+|..+..+ . + ...+|+..|-.++.
T Consensus 380 La~~--~~~~~~i~~~~~i~~Lv-~lL~~~~~~vr~~a~~al~n~~~~~~~~~~~v~~~a~~aL~ 441 (644)
T 2z6h_A 380 LALC--PANHAPLREQGAIPRLV-QLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALH 441 (644)
T ss_dssp HTTS--GGGHHHHHHTTHHHHHH-HHHHHHHHHHTTC----------CCSSCHHHHHHHHHHHHH
T ss_pred HccC--HHHHHHHHHcCCHHHHH-HHHhccchhhhhHhhhccccchhcccccHHHHHHHHHHHHH
Confidence 9864 3333333 478888 89999888888766544 1 2 34566666655554
|
| >1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A | Back alignment and structure |
|---|
Probab=95.70 E-value=0.16 Score=56.83 Aligned_cols=140 Identities=12% Similarity=0.071 Sum_probs=88.1
Q ss_pred hHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcC---hhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccC--------
Q 004157 366 VLPTIVKLFASNDRAIRVALLQHIDQYGQSFS---AQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPK-------- 434 (771)
Q Consensus 366 i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~---~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~k-------- 434 (771)
.+|.++.+....|..++...+.-|..+...-+ ...+...++|.++..+.+.+..+|+.++..+..++-.
T Consensus 102 ~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~ll~~~~~~~~~~~~~~L~~la~~~~~~~~~i 181 (529)
T 1jdh_A 102 GIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLII 181 (529)
T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCTTHHHHHHHHTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcchHHHHHHcCCHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 56666666666666666555555555443321 1222445666666666666666655544333322210
Q ss_pred -------------------------------------CChhHHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcc
Q 004157 435 -------------------------------------LSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEG 477 (771)
Q Consensus 435 -------------------------------------L~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~ 477 (771)
.-...+....++.|..+..+.++.+|.+++-+|+.|+..-...
T Consensus 182 ~~~~~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~g~~~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~ 261 (529)
T 1jdh_A 182 LASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQ 261 (529)
T ss_dssp HHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSTTHHHHHHHTTHHHHHHTTTTSSCHHHHHHHHHHHHHHHTTCTTC
T ss_pred HHCCCHHHHHHHHHhCChHHHHHHHHHHHHHHhcCcccHHHHHHCCCHHHHHHHHhCCChHHHHHHHHHHHHHhcCChhh
Confidence 0011223356777777777888899999999999999876543
Q ss_pred hhhHHhHHHHHHhhhcCCCcchhhheeee
Q 004157 478 TRKRVLINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 478 ~~~~vL~~af~~~~lkD~f~~~R~a~l~a 506 (771)
...+-+++.+. +.|+++...+|..++.+
T Consensus 262 ~~~~~~i~~L~-~ll~~~~~~v~~~a~~~ 289 (529)
T 1jdh_A 262 EGMEGLLGTLV-QLLGSDDINVVTCAAGI 289 (529)
T ss_dssp SCCHHHHHHHH-HHTTCSCHHHHHHHHHH
T ss_pred HHHHhHHHHHH-HHHcCCCHHHHHHHHHH
Confidence 33345688888 89999999999888776
|
| >2of3_A ZYG-9; multifunctional macromolecule, kinetochore, microtubule, XMAP215, STU2, DIS1, microtubule associated protein, structural protein; 1.90A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=95.69 E-value=0.064 Score=55.37 Aligned_cols=95 Identities=12% Similarity=0.144 Sum_probs=42.2
Q ss_pred cHHHHHHHHHhHHHHHhhcChhhhh--hccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChh---H---HhHHHHHHHH
Q 004157 378 DRAIRVALLQHIDQYGQSFSAQVVD--EQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQR---T---ISGSLLKYLS 449 (771)
Q Consensus 378 Dr~iR~~LL~~l~~~~~~l~~~~v~--~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~---~---l~~~LL~~la 449 (771)
|..-|+.-++.|...++.-+.+.+. |-+|+.+...|.|+++.|-..++..+..++..|.++ . --+.+||+|-
T Consensus 59 d~k~~~~ale~L~~~l~~~~~~~~~~lDll~kw~~lr~~d~N~~v~~~~L~~L~~l~~~l~~~~y~~~~~ea~~~lP~Lv 138 (266)
T 2of3_A 59 DFKQHLAALDSLVRLADTSPRSLLSNSDLLLKWCTLRFFETNPAALIKVLELCKVIVELIRDTETPMSQEEVSAFVPYLL 138 (266)
T ss_dssp CHHHHHHHHHHHHHHHHHCHHHHHHTHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHH
Confidence 5555555555554444432222111 113444444444555555555555555554444321 0 0234455543
Q ss_pred hhccCCCCcchhhHHHHHHHhhh
Q 004157 450 KLQVDEEPAIRTNTTILLGNIAS 472 (771)
Q Consensus 450 klq~D~~~~IRtnt~icl~kia~ 472 (771)
.=..|....||...--+|..|..
T Consensus 139 eKlGd~k~~vR~~~r~il~~l~~ 161 (266)
T 2of3_A 139 LKTGEAKDNMRTSVRDIVNVLSD 161 (266)
T ss_dssp HGGGCSSHHHHHHHHHHHHHHHH
T ss_pred HHhCCChHHHHHHHHHHHHHHHH
Confidence 33345555555555555544443
|
| >1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A | Back alignment and structure |
|---|
Probab=95.63 E-value=0.026 Score=63.47 Aligned_cols=180 Identities=14% Similarity=0.053 Sum_probs=118.2
Q ss_pred hhhhhhHHHHHHHHhcCCC--CchhhHHHHHhccCCChhhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhc---Ch
Q 004157 324 IVLKKLLPLLASALEFGSA--AAPALTALLKMGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSF---SA 398 (771)
Q Consensus 324 ~~~~kILP~Ll~~~~~~~~--~~~~L~~ll~i~~~l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l---~~ 398 (771)
+....++|.|++.+..... ...++..+..++......+....++|.+++++...|..+|...+.-|..+...- -.
T Consensus 223 ~~~~g~~~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~L~~~~~~~~~ 302 (529)
T 1jdh_A 223 IVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKM 302 (529)
T ss_dssp HHHTTHHHHHHTTTTSSCHHHHHHHHHHHHHHHTTCTTCSCCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTTCHHHHH
T ss_pred HHHCCCHHHHHHHHhCCChHHHHHHHHHHHHHhcCChhhHHHHhHHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHH
Confidence 4445567777776654321 111222333444444444445678999999999999999987776666665431 12
Q ss_pred hhhhhccHHHHHhhcCC--CcHHHHHHHHHHHHhhccCCCh------hHHhHHHHHHHHhhccCCC-CcchhhHHHHHHH
Q 004157 399 QVVDEQVYPHVATGFAD--TSAFLREMTLKSMLVLAPKLSQ------RTISGSLLKYLSKLQVDEE-PAIRTNTTILLGN 469 (771)
Q Consensus 399 ~~v~~~I~p~l~~gf~D--~~~~iRe~tlk~i~~l~~kL~~------~~l~~~LL~~laklq~D~~-~~IRtnt~icl~k 469 (771)
..+....+|.++..+.+ .++.+|+.++..+-.++..-.+ ..+....++.|.++-.++. ..||..++-+|+.
T Consensus 303 ~~~~~~~v~~L~~ll~~~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~i~~~~~i~~L~~lL~~~~~~~v~~~a~~~l~n 382 (529)
T 1jdh_A 303 MVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRN 382 (529)
T ss_dssp HHHHTTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSSTTHHHHHHHHHHTTCHHHHHHTTSTTCCHHHHHHHHHHHHH
T ss_pred HHHHcCChHHHHHHHHccCCHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHcCChhHHHHHhccccchHHHHHHHHHHHH
Confidence 23445578899988875 3479999999999998765433 2334456788888877766 5999999999999
Q ss_pred hhhccCcchhhHH----hHHHHHHhhhcCCCcchhhheeee
Q 004157 470 IASHLNEGTRKRV----LINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 470 ia~~L~~~~~~~v----L~~af~~~~lkD~f~~~R~a~l~a 506 (771)
|+.. ...+..+ +++.+. ..|+|....+|..+..+
T Consensus 383 l~~~--~~~~~~~~~~~~i~~L~-~ll~~~~~~v~~~a~~~ 420 (529)
T 1jdh_A 383 LALC--PANHAPLREQGAIPRLV-QLLVRAHQDTQRRTSMG 420 (529)
T ss_dssp HTTS--GGGHHHHHHTTHHHHHH-HHHHHHHHHHC------
T ss_pred HhcC--hhhhHHHHHcCCHHHHH-HHHHHHhHHHHHHHhcc
Confidence 9963 3344333 378888 89999888888876654
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=95.42 E-value=0.005 Score=66.16 Aligned_cols=30 Identities=10% Similarity=0.199 Sum_probs=25.8
Q ss_pred CCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 148 CKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 148 ~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
..++|||+++.||+++..+...|+||+.+.
T Consensus 222 ~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~ 251 (357)
T 3ats_A 222 PVLLWGDARVGNVLYRDFQPVAVLDWEMVA 251 (357)
T ss_dssp CEEECSSCSGGGEEEETTEEEEECCGGGCE
T ss_pred ceEEeCCCCCCeEEEeCCcEEEEEcccccc
Confidence 579999999999999964457899999875
|
| >2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A | Back alignment and structure |
|---|
Probab=95.11 E-value=0.33 Score=58.99 Aligned_cols=190 Identities=12% Similarity=0.197 Sum_probs=143.0
Q ss_pred hHHHHHHHHhcCCC--CchhhHHHHHhccCCChhhhhhhhHHHHHHhhcCC-cHHHHHHHHHhHHHHHhhcChhhhhhc-
Q 004157 329 LLPLLASALEFGSA--AAPALTALLKMGSWLSTEEFSVKVLPTIVKLFASN-DRAIRVALLQHIDQYGQSFSAQVVDEQ- 404 (771)
Q Consensus 329 ILP~Ll~~~~~~~~--~~~~L~~ll~i~~~l~~eef~~~i~P~i~~lF~~~-Dr~iR~~LL~~l~~~~~~l~~~~v~~~- 404 (771)
+||.++..+-.... ...+-..+..|...++.+-- ..++|.|...+... .|+.++..|+-+..+++.. ++.+-..
T Consensus 96 ~~~~~~~~~~dk~~~v~~aa~~~~~~~~~~~~~~a~-~~~~~~~~~~~~~~~kw~~k~~~l~~~~~~~~~~-~~~~~~~~ 173 (986)
T 2iw3_A 96 LVPAICTNAGNKDKEIQSVASETLISIVNAVNPVAI-KALLPHLTNAIVETNKWQEKIAILAAFSAMVDAA-KDQVALRM 173 (986)
T ss_dssp THHHHHHHTTCSSHHHHHHHHHHHHHHHHHSCGGGH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHS-HHHHHHHH
T ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHHHhCCHHHH-HHHHHHHHHHhccccchHHHHHHHHHHHHHHHHh-HHHHHHhc
Confidence 46777666543321 12344456778888888776 88899999888654 6999999999999999988 5555544
Q ss_pred --cHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcch----
Q 004157 405 --VYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGT---- 478 (771)
Q Consensus 405 --I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~---- 478 (771)
|+|.+..+|.|+-++|..++.+.|..++..++-+-|.. .+|.|-+...+++ ++--|+.+|+..=--..
T Consensus 174 ~~~~p~~~~~~~d~k~~v~~~~~~~~~~~~~~~~n~d~~~-~~~~~~~~~~~p~-----~~~~~~~~l~~~tfv~~v~~~ 247 (986)
T 2iw3_A 174 PELIPVLSETMWDTKKEVKAAATAAMTKATETVDNKDIER-FIPSLIQCIADPT-----EVPETVHLLGATTFVAEVTPA 247 (986)
T ss_dssp HHHHHHHHHHTTCSSHHHHHHHHHHHHHHGGGCCCTTTGG-GHHHHHHHHHCTT-----HHHHHHHHHTTCCCCSCCCHH
T ss_pred cchhcchHhhcccCcHHHHHHHHHHHHHHHhcCCCcchhh-hHHHHHHHhcChh-----hhHHHHHHhhcCeeEeeecch
Confidence 79999999999999999999999999999999888554 5566666666663 48889999887654321
Q ss_pred hhHHhHHHHHHhhhcCCCcch-hhheeee--------------cc---------------CCHHHHHHHHHHHHHHHHH
Q 004157 479 RKRVLINAFTVRALRDTFSPA-RGAAKIL--------------SY---------------LNCDVRSKAFQAVDQFLQI 527 (771)
Q Consensus 479 ~~~vL~~af~~~~lkD~f~~~-R~a~l~a--------------~~---------------~~~~VR~~a~~~~~~~l~~ 527 (771)
.-.+++|.+. |+|++.-... |.+++-- .| .+++||..|.++++.+..-
T Consensus 248 ~l~~~~p~l~-r~l~~~~~~~~r~~~~~~~n~~~lv~~~~~~~~f~~~l~p~~~~~~~~~~~pe~r~~~~~a~~~l~~~ 325 (986)
T 2iw3_A 248 TLSIMVPLLS-RGLNERETGIKRKSAVIIDNMCKLVEDPQVIAPFLGKLLPGLKSNFATIADPEAREVTLRALKTLRRV 325 (986)
T ss_dssp HHHHHHHHHH-HHHTSSSHHHHHHHHHHHHHHHTTCCCHHHHHHHHTTTHHHHHHHTTTCCSHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHH-hhhccCcchhheeeEEEEcchhhhcCCHHHHhhhhhhhhhHHHHHhhccCCHHHHHHHHHHHHHHHHh
Confidence 3458899999 9999876544 5554443 12 8999999999999876544
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=95.06 E-value=0.21 Score=49.85 Aligned_cols=126 Identities=10% Similarity=-0.048 Sum_probs=77.8
Q ss_pred CCcchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCC
Q 004157 108 PVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAAN 187 (771)
Q Consensus 108 ~v~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~ 187 (771)
.+.+|.+.|+.++.. ..++.+|-.++|.+.+|.-+-....-..+=+.|.+|++..+|.+.+.+ .... .
T Consensus 31 ~~vSL~eIL~~~~~P--lsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~--~------- 98 (229)
T 2yle_A 31 DALSLEEILRLYNQP--INEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AADD--A------- 98 (229)
T ss_dssp SEEEHHHHHHHHTSC--CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C-------------
T ss_pred ccccHHHHHHHcCCC--cCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-cccc--c-------
Confidence 345799999887643 345556777999999988873211212444567999999999988764 1110 0
Q ss_pred CCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhccCCCCcchHHHHHHHhcc
Q 004157 188 GPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTASIPKSLLPDYQRLLSS 266 (771)
Q Consensus 188 ~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~~~~IP~~l~~~i~~lL~~ 266 (771)
....+.|||... ...+.+.=|||||++||..+.-+-+.+ +-..+++.|..++..|.+.
T Consensus 99 ---------~~~~~~~pe~~~-------~~~te~~~IysLG~tLY~ALDygL~e~-----eE~eLS~~LE~LL~~Mt~~ 156 (229)
T 2yle_A 99 ---------GEPPPVAGKLGY-------SQCMETEVIESLGIIIYKALDYGLKEN-----EERELSPPLEQLIDHMANT 156 (229)
T ss_dssp -----------------CCSS-------SSSCHHHHHHHHHHHHHHHHTTTCCTT-----EEECCCHHHHHHHHHHTTC
T ss_pred ---------cccCCCChhhcc-------ccchHHHHHHHHHHHHHHHhhcCCCcc-----cchhhCHHHHHHHHHHHhc
Confidence 012455777653 133457789999999999987332211 1235777888889888765
|
| >1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24 | Back alignment and structure |
|---|
Probab=94.75 E-value=0.1 Score=58.25 Aligned_cols=162 Identities=13% Similarity=0.076 Sum_probs=109.6
Q ss_pred hHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcCh---hhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccC---CChhH
Q 004157 366 VLPTIVKLFASNDRAIRVALLQHIDQYGQSFSA---QVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPK---LSQRT 439 (771)
Q Consensus 366 i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~---~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~k---L~~~~ 439 (771)
.+|.++.+..+.|..++...+..|..+..+-+. .++..-.+|.|+..+.+.++.+|+.++.++..++.. .....
T Consensus 3 ~l~~lv~~L~s~~~~~q~~A~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~~k~~i 82 (457)
T 1xm9_A 3 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 82 (457)
T ss_dssp CHHHHHHHHHSSCTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHH
T ss_pred CHHHHHHHHCCCCHHHHHHHHHHHHHHHcCChHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 468888888888998988888888777644332 566677899999999999999999999999988863 11122
Q ss_pred HhHHHHHHHHhhcc-CCCCcchhhHHHHHHHhhhccCcchhhHH---hHHHHHHhhh--------cCCCcchhh------
Q 004157 440 ISGSLLKYLSKLQV-DEEPAIRTNTTILLGNIASHLNEGTRKRV---LINAFTVRAL--------RDTFSPARG------ 501 (771)
Q Consensus 440 l~~~LL~~laklq~-D~~~~IRtnt~icl~kia~~L~~~~~~~v---L~~af~~~~l--------kD~f~~~R~------ 501 (771)
+....+|.|-++-. ..++.+|-+++-+|+.|+.. .+.|..+ .+|.+. +.| +++....|-
T Consensus 83 ~~~G~i~~Lv~lL~~~~~~~~~~~a~~aL~nLa~~--~~~~~~i~~g~i~~Lv-~ll~~~~s~~~~~~~~~~~e~~~~~v 159 (457)
T 1xm9_A 83 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST--DELKEELIADALPVLA-DRVIIPFSGWCDGNSNMSREVVDPEV 159 (457)
T ss_dssp HHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTS--SSTHHHHHHHHHHHHH-HHTTHHHHTCC---------CCCHHH
T ss_pred HHcCCHHHHHHHHhhCCCHHHHHHHHHHHHHHhcC--HHhHHHHHhccHHHHH-HHHhccccccccCccchhcccccHHH
Confidence 34455777877776 67889999999999999987 4455544 378888 888 444443332
Q ss_pred --heeee--cc-CCHHHHHHHH---HHHHHHHHHHHH
Q 004157 502 --AAKIL--SY-LNCDVRSKAF---QAVDQFLQIVKQ 530 (771)
Q Consensus 502 --a~l~a--~~-~~~~VR~~a~---~~~~~~l~~l~~ 530 (771)
.|+.+ .. .+.+.|+... .++..++.-|+.
T Consensus 160 ~~~a~~aL~nLs~~~~~~~~i~~~~g~i~~Lv~lL~~ 196 (457)
T 1xm9_A 160 FFNATGCLRNLSSADAGRQTMRNYSGLIDSLMAYVQN 196 (457)
T ss_dssp HHHHHHHHHHHTTSHHHHHHHTTSTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHcCCCHHHHHHHHHh
Confidence 33333 11 3355555544 345666655554
|
| >2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} | Back alignment and structure |
|---|
Probab=94.74 E-value=0.076 Score=63.57 Aligned_cols=181 Identities=9% Similarity=0.005 Sum_probs=118.6
Q ss_pred hhhhhHHHHHHHHhcCCCCc---hhhHHHHHhccCCCh-hh-hhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChh
Q 004157 325 VLKKLLPLLASALEFGSAAA---PALTALLKMGSWLST-EE-FSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQ 399 (771)
Q Consensus 325 ~~~kILP~Ll~~~~~~~~~~---~~L~~ll~i~~~l~~-ee-f~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~ 399 (771)
.....++.|++.++.+.... .++..+..++..-.. .. ....++|.|..++...+..++...+.-|..+.......
T Consensus 315 ~~~~~i~~Lv~lL~~~~~~~~~~~a~~aL~~Ls~~~~~~~~i~~~g~l~~Ll~lL~~~~~~~~~~a~~~L~~L~~~~~~~ 394 (780)
T 2z6g_A 315 LASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQ 394 (780)
T ss_dssp HTTTHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSTTHHHHHHHTTHHHHHGGGTTCSCHHHHHHHHHHHHHHHTTCTTC
T ss_pred HHcCCHHHHHHHHhcCCHHHHHHHHHHHHHHhhcChHHHHHHHHhchHHHHHHHHcCCchHHHHHHHHHHHHHhccchhh
Confidence 33456677777666443111 112222333321111 11 23346899999998888888877777777777766655
Q ss_pred hhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChh---HHhHHHHHHHHhhccC-CCC-cchhhHHHHHHHhhhcc
Q 004157 400 VVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQR---TISGSLLKYLSKLQVD-EEP-AIRTNTTILLGNIASHL 474 (771)
Q Consensus 400 ~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~---~l~~~LL~~laklq~D-~~~-~IRtnt~icl~kia~~L 474 (771)
.....++|.|+..+.+.++.+|+.++..+..|+..-.+. .+....++.|-++..+ .+. .||..++.||+.|+..-
T Consensus 395 ~~~~~~i~~Lv~lL~~~d~~vr~~A~~aL~~L~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~v~~~Al~aL~nL~~~~ 474 (780)
T 2z6g_A 395 EGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRH 474 (780)
T ss_dssp SCCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHHTTTHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSS
T ss_pred hhhhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHHccCCHHHHHHHHHHHHHHHHhcC
Confidence 556779999999999999999999999999887653221 2223455555555443 343 89999999999998654
Q ss_pred Ccc--hhhHH----hHHHHHHhhhcCCCc-chhhheeee
Q 004157 475 NEG--TRKRV----LINAFTVRALRDTFS-PARGAAKIL 506 (771)
Q Consensus 475 ~~~--~~~~v----L~~af~~~~lkD~f~-~~R~a~l~a 506 (771)
... .+..| .++.+. +.|+++.. .+|.+++.+
T Consensus 475 ~~~~~~~~~v~~~~~l~~L~-~lL~~~~~~~v~~~A~~a 512 (780)
T 2z6g_A 475 QDAEMAQNAVRLHYGLPVVV-KLLHPPSHWPLIKATVGL 512 (780)
T ss_dssp TTHHHHHHHHHHTTCHHHHH-HTTSTTCCHHHHHHHHHH
T ss_pred chHHHHHHHHHHcCCHHHHH-HHhcCCChHHHHHHHHHH
Confidence 331 12222 378888 89998875 888888776
|
| >3l9t_A Putative uncharacterized protein SMU.31; hypothetical protein, unknown function; HET: EPE; 2.21A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=94.71 E-value=0.098 Score=52.71 Aligned_cols=108 Identities=10% Similarity=0.198 Sum_probs=88.8
Q ss_pred hhhHHHHHH-hhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhH
Q 004157 364 VKVLPTIVK-LFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISG 442 (771)
Q Consensus 364 ~~i~P~i~~-lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~ 442 (771)
..+++.|.. +-....+.||..+-.-+..++....++ ..++.+.....|.+.-||-.++..+...+.....++--.
T Consensus 102 ~~~L~~ir~~va~D~~WrVre~lA~a~~~~~~~~~pe----~~l~~~~~W~~d~n~~VRR~Ase~~rpW~~~~~~k~dp~ 177 (240)
T 3l9t_A 102 KEILIFMRDEVSKDNNWRVQEVLAKAFDEFCKKIEYK----KALPIIDEWLKSSNLHTRRAATEGLRIWTNRPYFKENPN 177 (240)
T ss_dssp HHHHHHHHHTGGGCSCHHHHHHHHHHHHHHHHHHCTT----TTHHHHHHHHHCSSHHHHHHHHHHTCSGGGSTTTTTCHH
T ss_pred HHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHhcCHH----HHHHHHHHHhcCCCHHHHHHHHHhhHHHhccchhhcCHH
Confidence 568999998 445667899999999999888755554 377889999999999999999998876554444455566
Q ss_pred HHHHHHHhhccCCCCcchhhHHHHHHHhhhccC
Q 004157 443 SLLKYLSKLQVDEEPAIRTNTTILLGNIASHLN 475 (771)
Q Consensus 443 ~LL~~laklq~D~~~~IRtnt~icl~kia~~L~ 475 (771)
.++|.|..+..|++-.||-...=.|..|++.=.
T Consensus 178 ~ll~iL~~L~~D~s~yVrKSVan~LrD~SK~~P 210 (240)
T 3l9t_A 178 EAIRRIADLKEDVSEYVRKSVGNALRDISKKFP 210 (240)
T ss_dssp HHHHHHHTTTTCSCHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHhcCChHHHHHHHHHHHHHHHhhhCH
Confidence 799999999999999999999999998887643
|
| >3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=94.50 E-value=0.44 Score=56.85 Aligned_cols=177 Identities=12% Similarity=0.058 Sum_probs=121.1
Q ss_pred hhhhhhHHHHHHHHhcCCCC--chhhHHHHHhccCCChhhhhh-----hhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhc
Q 004157 324 IVLKKLLPLLASALEFGSAA--APALTALLKMGSWLSTEEFSV-----KVLPTIVKLFASNDRAIRVALLQHIDQYGQSF 396 (771)
Q Consensus 324 ~~~~kILP~Ll~~~~~~~~~--~~~L~~ll~i~~~l~~eef~~-----~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l 396 (771)
+...-.+|.|+..+..++.. ..+.-.+..|+.. +++.. -++|.|+.++.+.+..+|.....-|..+...-
T Consensus 491 VveaGaVp~LV~LL~s~s~~vqe~Aa~aL~NLA~d---~~~r~~Vv~~Gaip~Lv~LL~s~~~~~k~~Aa~AL~nL~~~~ 567 (810)
T 3now_A 491 LANEGITTALCALAKTESHNSQELIARVLNAVCGL---KELRGKVVQEGGVKALLRMALEGTEKGKRHATQALARIGITI 567 (810)
T ss_dssp HHHTTHHHHHHHHHTCCCHHHHHHHHHHHHHHHTS---HHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHS
T ss_pred HHHCcCHHHHHHHHcCCCHHHHHHHHHHHHHHcCC---HHHHHHHHHCCCHHHHHHHHccCCHHHHHHHHHHHHHHhcCC
Confidence 33445689999888765421 1234445555532 23333 36899999999888887777666666665554
Q ss_pred Chhhhh-----hccHHHHHhhcCCC-cHHHHHHHHHHHHhhccC---CChhHHhHHHHHHHHhhccCCCCcchhhHHHHH
Q 004157 397 SAQVVD-----EQVYPHVATGFADT-SAFLREMTLKSMLVLAPK---LSQRTISGSLLKYLSKLQVDEEPAIRTNTTILL 467 (771)
Q Consensus 397 ~~~~v~-----~~I~p~l~~gf~D~-~~~iRe~tlk~i~~l~~k---L~~~~l~~~LL~~laklq~D~~~~IRtnt~icl 467 (771)
+++.+- ..++|.|+..+... +...+..++.++..|+.. .....+....++.|-.+..++.+.||.+++-||
T Consensus 568 ~p~~~~~~~~~~~aIppLv~LL~~~~~~l~~~eAl~AL~NLa~~~d~~~~~Ii~aG~l~~Lv~LL~s~~~~Vq~~A~~~L 647 (810)
T 3now_A 568 NPEVSFSGQRSLDVIRPLLNLLQQDCTALENFESLMALTNLASMNESVRQRIIKEQGVSKIEYYLMEDHLYLTRAAAQCL 647 (810)
T ss_dssp CHHHHTTTHHHHHTHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHSCCTTHHHHHHHHH
T ss_pred ChhhhhcchhhhcHHHHHHHHhCCCCcHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHH
Confidence 443321 23789999988754 445566788888888754 233455556789999999999999999999999
Q ss_pred HHhhhccCcchhhHHh-----HHHHHHhhhcCCCcchhhheeee
Q 004157 468 GNIASHLNEGTRKRVL-----INAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 468 ~kia~~L~~~~~~~vL-----~~af~~~~lkD~f~~~R~a~l~a 506 (771)
+.|+.. .+.+..++ ++.+. ..|..+...+|.+|..+
T Consensus 648 ~NLa~~--~~~~~~~v~~~g~l~~Lv-~LL~s~d~~vq~~Aa~A 688 (810)
T 3now_A 648 CNLVMS--EDVIKMFEGNNDRVKFLA-LLCEDEDEETATACAGA 688 (810)
T ss_dssp HHHTTS--HHHHHHHHSSSSHHHHHH-HGGGCSSHHHHHHHHHH
T ss_pred HHHhCC--hHHHHHHHhccCcHHHHH-HHhcCCCHHHHHHHHHH
Confidence 999973 33333332 56777 78888888899888776
|
| >3oc3_A Helicase MOT1, MOT1; regulation of transcription, hydrolase-transc complex; HET: MES; 3.10A {Encephalitozoon cuniculi} | Back alignment and structure |
|---|
Probab=94.44 E-value=0.26 Score=55.29 Aligned_cols=168 Identities=9% Similarity=0.057 Sum_probs=113.3
Q ss_pred cCCChhhhhhhhHHHHHHhhcCCcHHHHH---HHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhh
Q 004157 355 SWLSTEEFSVKVLPTIVKLFASNDRAIRV---ALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVL 431 (771)
Q Consensus 355 ~~l~~eef~~~i~P~i~~lF~~~Dr~iR~---~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l 431 (771)
..++.+ -.|+-.++..-..+.|++|- .-|.++ .+.+.. -+.|+|.++.|+.|.+..||..++..+..+
T Consensus 256 ~hLp~e---~~IL~qLV~~l~~~~WEVRHGGLLGLKYL---~DLL~~---Ld~Vv~aVL~GL~D~DDDVRAVAAetLiPI 326 (800)
T 3oc3_A 256 YPLIGP---NDIIEQLVGFLDSGDWQVQFSGLIALGYL---KEFVED---KDGLCRKLVSLLSSPDEDIKLLSAELLCHF 326 (800)
T ss_dssp TTTSCS---CCHHHHHTTGGGCSCHHHHHHHHHHHHHT---GGGCCC---HHHHHHHHHHHTTCSSHHHHHHHHHHHTTS
T ss_pred HhCChh---HHHHHHHHhhcCCCCeeehhhhHHHHHHH---HHHHHH---HHHHHHHHHhhcCCcccHHHHHHHHHhhhh
Confidence 566666 24444444445778899994 445555 444433 477999999999999999999999999888
Q ss_pred ccCCChhHHhHHHHHHHHhhccCC-CCcchhhHHH-HHHHhhhccCcchhhHHhHHHHHHhhhcCCCcchhhheeee--c
Q 004157 432 APKLSQRTISGSLLKYLSKLQVDE-EPAIRTNTTI-LLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL--S 507 (771)
Q Consensus 432 ~~kL~~~~l~~~LL~~laklq~D~-~~~IRtnt~i-cl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R~a~l~a--~ 507 (771)
+ ...-.+.|+..+...-.|- +-+.=|+.++ .|++|..+=........|+|.+. -.|+-+-..+|.|.|.+ .
T Consensus 327 A----~p~~l~~LL~iLWd~L~~LDDLSASTgSVMdLLAkL~s~p~~a~~dp~LVPRL~-PFLRHtITSVR~AVL~TL~t 401 (800)
T 3oc3_A 327 P----ITDSLDLVLEKCWKNIESEELISVSKTSNLSLLTKIYRENPELSIPPERLKDIF-PCFTSPVPEVRTSILNMVKN 401 (800)
T ss_dssp C----CSSTHHHHHHHHHHHHHTCCSCCTTHHHHHHHHHHHHHHCTTCCCCSGGGGGTG-GGGTCSSHHHHHHHHHHTTT
T ss_pred c----chhhHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHcCCcccccChHHHHHHH-hhhcCCcHHHHHHHHHHHHH
Confidence 8 2222456666665555442 2333333322 44444444333333447899998 89999999999999988 2
Q ss_pred c----------------CCHHHHHHHHHHHH---HHHHHHHHHHhhcC
Q 004157 508 Y----------------LNCDVRSKAFQAVD---QFLQIVKQYHEKTN 536 (771)
Q Consensus 508 ~----------------~~~~VR~~a~~~~~---~~l~~l~~~~~~~~ 536 (771)
+ .+.+||+.+.++.+ .+++-+=.+..++.
T Consensus 402 fL~~~~LRLIFQNILLE~neeIl~lS~~VWk~r~~Ll~~wi~L~MtPI 449 (800)
T 3oc3_A 402 LSEESIDFLVAEVVLIEEKDEIREMAIKLLKKRRDLPKNLILHFMNVI 449 (800)
T ss_dssp CCCHHHHHHHHHHHHHCSCHHHHHHHHHHHHTCSCCCHHHHHHHHHHT
T ss_pred HHhhhHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCcC
Confidence 2 88999999999996 55555555555543
|
| >3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A | Back alignment and structure |
|---|
Probab=94.44 E-value=0.25 Score=53.31 Aligned_cols=140 Identities=11% Similarity=0.095 Sum_probs=97.8
Q ss_pred hHHHHHHhhcCCcHHHHHHHHHhHHHHHhh----cChhhhhhccHHHHHhh-cCCCcHHHHHHHHHHHHhhccCCCh---
Q 004157 366 VLPTIVKLFASNDRAIRVALLQHIDQYGQS----FSAQVVDEQVYPHVATG-FADTSAFLREMTLKSMLVLAPKLSQ--- 437 (771)
Q Consensus 366 i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~----l~~~~v~~~I~p~l~~g-f~D~~~~iRe~tlk~i~~l~~kL~~--- 437 (771)
++|.|+.+..+.+..++.....-|..+... .-..++..-.+|.|+.. +...+..+++.++.++-.++..-++
T Consensus 128 aIp~LV~LL~s~~~~v~~~A~~aL~nLs~~~~~~~k~~i~~~G~Ip~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~~nk~ 207 (354)
T 3nmw_A 128 CMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENKA 207 (354)
T ss_dssp HHHHHHHGGGCSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred cHHHHHHHHCCCCHHHHHHHHHHHHHHhccCCHHHHHHHHHCCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHccChhhhH
Confidence 489999999998888876555444444432 11223445578999986 4667889999888888777763322
Q ss_pred hHH-hHHHHHHHHhhccCCCC----cchhhHHHHHHHhhhcc--CcchhhHHh----HHHHHHhhhcCCCcchhhheeee
Q 004157 438 RTI-SGSLLKYLSKLQVDEEP----AIRTNTTILLGNIASHL--NEGTRKRVL----INAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 438 ~~l-~~~LL~~laklq~D~~~----~IRtnt~icl~kia~~L--~~~~~~~vL----~~af~~~~lkD~f~~~R~a~l~a 506 (771)
..+ ....+|.|.++..+... .|+.+++-+|..|+.++ +.+.|+.++ ++.+. ..|+++...++..|+.+
T Consensus 208 ~i~~~~Gai~~Lv~lL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~g~i~~Lv-~lL~~~~~~v~~~A~~a 286 (354)
T 3nmw_A 208 DICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLL-QHLKSHSLTIVSNACGT 286 (354)
T ss_dssp HHHHSTTHHHHHHHHTTCCCSSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHHHHH-HHTTCSCHHHHHHHHHH
T ss_pred HHHHhcCcHHHHHHHhccCCCcccHHHHHHHHHHHHHHHhhccCCHHHHHHHHHcCCHHHHH-HHHcCCChHHHHHHHHH
Confidence 222 35677878777664433 48999999999999874 445666554 78888 89999888888777766
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=94.33 E-value=0.15 Score=53.97 Aligned_cols=68 Identities=9% Similarity=-0.004 Sum_probs=48.2
Q ss_pred CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC---CCCeeEEeeeEEecccCcCCccc
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR---HPNILAFLHSTEVENIDATSTKI 100 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr---HPnIlkv~d~~e~e~~d~~~~~~ 100 (771)
+.++.|. . .+|..+. ++..+.+|+.... ....+..|+..|+.|. ...|.+++...+.+ .
T Consensus 42 ~~l~gG~~n--~~y~v~~--~~~~~vlK~~~~~-----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~--------g 104 (312)
T 3jr1_A 42 EKLYSGEMN--EIWLIND--EVQTVFVKINERS-----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQ--------G 104 (312)
T ss_dssp EEECCSSSS--EEEEEES--SSCEEEEEEEEGG-----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECS--------S
T ss_pred EEeCCccce--eeeEEEE--CCCeEEEEeCCcc-----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecC--------C
Confidence 4566665 5 7888764 4778989987642 2456788988888885 24577777766542 2
Q ss_pred EEEEEecCC
Q 004157 101 TIYIVTEPV 109 (771)
Q Consensus 101 ~iyIVtE~v 109 (771)
..|+|||++
T Consensus 105 ~~~lvme~l 113 (312)
T 3jr1_A 105 HSFLLLEAL 113 (312)
T ss_dssp EEEEEEECC
T ss_pred ceEEEEEec
Confidence 679999999
|
| >2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A | Back alignment and structure |
|---|
Probab=94.30 E-value=0.18 Score=61.27 Aligned_cols=132 Identities=13% Similarity=0.236 Sum_probs=112.5
Q ss_pred hhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCc-HHHHHHHHHHHHhhccCCChh--
Q 004157 362 FSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTS-AFLREMTLKSMLVLAPKLSQR-- 438 (771)
Q Consensus 362 f~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~-~~iRe~tlk~i~~l~~kL~~~-- 438 (771)
|---++|.+...+++.+..||-..-.-+..++..++++.+ ..++|.++.++..+. =+.+..+++.|-.++....+.
T Consensus 92 ~~~~~~~~~~~~~~dk~~~v~~aa~~~~~~~~~~~~~~a~-~~~~~~~~~~~~~~~kw~~k~~~l~~~~~~~~~~~~~~~ 170 (986)
T 2iw3_A 92 YIVQLVPAICTNAGNKDKEIQSVASETLISIVNAVNPVAI-KALLPHLTNAIVETNKWQEKIAILAAFSAMVDAAKDQVA 170 (986)
T ss_dssp HHHTTHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSCGGGH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHSHHHHH
T ss_pred chHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhCCHHHH-HHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhHHHHH
Confidence 3335799999999999999999999999999999999998 779999999998775 688888898888888766332
Q ss_pred HHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCC
Q 004157 439 TISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTF 496 (771)
Q Consensus 439 ~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f 496 (771)
.-.-+|+|.+...--|..+.|.....-|+.+++..++...... .+|.+. +.+.+|.
T Consensus 171 ~~~~~~~p~~~~~~~d~k~~v~~~~~~~~~~~~~~~~n~d~~~-~~~~~~-~~~~~p~ 226 (986)
T 2iw3_A 171 LRMPELIPVLSETMWDTKKEVKAAATAAMTKATETVDNKDIER-FIPSLI-QCIADPT 226 (986)
T ss_dssp HHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHGGGCCCTTTGG-GHHHHH-HHHHCTT
T ss_pred HhccchhcchHhhcccCcHHHHHHHHHHHHHHHhcCCCcchhh-hHHHHH-HHhcChh
Confidence 2356899999999999999999999999999999998766444 588888 8888884
|
| >3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=94.15 E-value=0.38 Score=57.37 Aligned_cols=179 Identities=15% Similarity=0.161 Sum_probs=127.7
Q ss_pred HHHHhccCCC----hhhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHH---hhcChhhh-hhccHHHHHhhcCCCcHHH
Q 004157 349 ALLKMGSWLS----TEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYG---QSFSAQVV-DEQVYPHVATGFADTSAFL 420 (771)
Q Consensus 349 ~ll~i~~~l~----~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~---~~l~~~~v-~~~I~p~l~~gf~D~~~~i 420 (771)
.+-++-+.+. .+.|.+.+--.|...|..++-.-++....-+..+. .-.....+ .+-++|.|+..+...+..+
T Consensus 227 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~alt~i~~g~~~~~~~~~~~~G~v~~li~Ll~s~~~~~ 306 (810)
T 3now_A 227 CLARIYENMYYDEAKARFTDQIDEYIKDKLLAPDMESKVRVTVAITALLNGPLDVGNQVVAREGILQMILAMATTDDELQ 306 (810)
T ss_dssp HHHHHHHTCCSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHSSSHHHHHHHHHTTTHHHHHHHHHHSSCHHH
T ss_pred HHHHHHHHhccchhHHHHHHHHHHHHHHHhccCChHhHHHHHHHHHHHhcCCHHHHHHHHhccchHHHHHHHhCCCCHHH
Confidence 3446666665 37799999999999998877654433333333332 22233344 6678999999999999999
Q ss_pred HHHHHHHHHhhccCCChhH--HhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccC--------cchhhHHhHHHHHHh
Q 004157 421 REMTLKSMLVLAPKLSQRT--ISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLN--------EGTRKRVLINAFTVR 490 (771)
Q Consensus 421 Re~tlk~i~~l~~kL~~~~--l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~--------~~~~~~vL~~af~~~ 490 (771)
|++++..+...+..-..+. +...+ +.|..+....+..||.+++.+|.|++..-+ .+....-|++.|. +
T Consensus 307 q~~A~~al~~aa~~~~~R~~I~~~gv-~~L~~Ll~s~~~~vr~~Al~~L~kl~s~~~~d~~~~~~~~g~i~~Lv~~l~-~ 384 (810)
T 3now_A 307 QRVACECLIAASSKKDKAKALCEQGV-DILKRLYHSKNDGIRVRALVGLCKLGSYGGQDAAIRPFGDGAALKLAEACR-R 384 (810)
T ss_dssp HHHHHHHHHHHTTSHHHHHTTHHHHH-HHHHHHTTCSCHHHHHHHHHHHHHHHTTTTTTTSCCSSTTTHHHHHHHHHH-H
T ss_pred HHHHHHHHHHHcCCcHHHHHHHHcCc-HHHHHHHcCCCHHHHHHHHHHHHHhccccccCccccchhhccHHHHHHHHH-H
Confidence 9999999999888844442 34455 888888877778999999999999985332 1122356799999 9
Q ss_pred hhcCC--Ccchhhheeee-cc--CCHHHHHHHH---HHHHHHHHHHH
Q 004157 491 ALRDT--FSPARGAAKIL-SY--LNCDVRSKAF---QAVDQFLQIVK 529 (771)
Q Consensus 491 ~lkD~--f~~~R~a~l~a-~~--~~~~VR~~a~---~~~~~~l~~l~ 529 (771)
.|.++ ....|..++.+ .| .+..||.+-- .++..+++-|+
T Consensus 385 lL~~~~~d~~v~~~AveaLayLS~~~~vk~~lv~d~g~Ip~LV~LL~ 431 (810)
T 3now_A 385 FLIKPGKDKDIRRWAADGLAYLTLDAECKEKLIEDKASIHALMDLAR 431 (810)
T ss_dssp HHHCSSCCSSHHHHHHHHHHHHTTSHHHHHHHHHCHHHHHHHHHHHH
T ss_pred HhcCCCCCHHHHHHHHHHHHHHhCCcHHHHHHHHccchHHHHHHHhC
Confidence 99998 88999999999 66 6677776544 35555555554
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=94.06 E-value=0.16 Score=53.08 Aligned_cols=29 Identities=3% Similarity=-0.036 Sum_probs=24.9
Q ss_pred CCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 148 CKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 148 ~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
..++|||+.+.||+ ..+|.+.|+||+.+.
T Consensus 173 ~~l~HgDl~~~Nil-~~~~~~~lID~e~a~ 201 (301)
T 3dxq_A 173 LAACHCDPLCENFL-DTGERMWIVDWEYSG 201 (301)
T ss_dssp CEEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred ceeeccCCCcCCEE-ECCCCEEEEeccccc
Confidence 35899999999999 566778999999875
|
| >3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.88 E-value=0.34 Score=54.09 Aligned_cols=141 Identities=11% Similarity=0.094 Sum_probs=98.9
Q ss_pred hhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcC----hhhhhhccHHHHHhh-cCCCcHHHHHHHHHHHHhhccCCCh--
Q 004157 365 KVLPTIVKLFASNDRAIRVALLQHIDQYGQSFS----AQVVDEQVYPHVATG-FADTSAFLREMTLKSMLVLAPKLSQ-- 437 (771)
Q Consensus 365 ~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~----~~~v~~~I~p~l~~g-f~D~~~~iRe~tlk~i~~l~~kL~~-- 437 (771)
-.+|.|+.++.+.+..++.....-|..+...-+ ..++....+|.|+.. +...+..+++.++.++-.|+..-++
T Consensus 243 GaIp~LV~LL~s~~~~v~~~A~~aL~nLs~~~~~~~k~~I~~~GaI~~LV~lLl~s~~~~v~~~A~~aL~nLs~~~~~nk 322 (458)
T 3nmz_A 243 GCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENK 322 (458)
T ss_dssp HHHHHHHHGGGCSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHCHHHH
T ss_pred CcHHHHHHHHhCCCHHHHHHHHHHHHHHhcCCCHHHHHHHHHcCCHHHHHHHHhcCCCHHHHHHHHHHHHHHccCCHHHH
Confidence 358999999999998888665555544443211 223444578999996 5667889999888888777752212
Q ss_pred -hHH-hHHHHHHHHhhccCCCC----cchhhHHHHHHHhhhcc--CcchhhHHh----HHHHHHhhhcCCCcchhhheee
Q 004157 438 -RTI-SGSLLKYLSKLQVDEEP----AIRTNTTILLGNIASHL--NEGTRKRVL----INAFTVRALRDTFSPARGAAKI 505 (771)
Q Consensus 438 -~~l-~~~LL~~laklq~D~~~----~IRtnt~icl~kia~~L--~~~~~~~vL----~~af~~~~lkD~f~~~R~a~l~ 505 (771)
..+ ....+|.|.++...... .|+.+++-+|..|+.++ +.+.++.++ ++.+. ..|+++...++..|+.
T Consensus 323 ~~I~~~~Gal~~Lv~LL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~G~i~~Lv-~LL~~~~~~v~~~A~~ 401 (458)
T 3nmz_A 323 ADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLL-QHLKSHSLTIVSNACG 401 (458)
T ss_dssp HHHHHSTTHHHHHHHHTTCCCSSSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHH-HHSSCSCHHHHHHHHH
T ss_pred HHHHHhcCcHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHhcccCCHHHHHHHHHcccHHHHH-HHHcCCChHHHHHHHH
Confidence 222 35677888777664433 49999999999999874 445566554 78888 8999988888877776
Q ss_pred e
Q 004157 506 L 506 (771)
Q Consensus 506 a 506 (771)
+
T Consensus 402 a 402 (458)
T 3nmz_A 402 T 402 (458)
T ss_dssp H
T ss_pred H
Confidence 6
|
| >1lrv_A LRV, leucine-rich repeat variant; leucine-rich repeats, repetitive structure, iron sulfur proteins, nitrogen fixation; 2.60A {Azotobacter vinelandii} SCOP: a.118.1.5 | Back alignment and structure |
|---|
Probab=93.88 E-value=0.013 Score=59.90 Aligned_cols=108 Identities=16% Similarity=0.207 Sum_probs=80.1
Q ss_pred HHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHHHHH
Q 004157 369 TIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYL 448 (771)
Q Consensus 369 ~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL~~l 448 (771)
.|..+..++|+.||+....+| +.+ .+...++|.++.||...+..+. . +.+
T Consensus 102 ~L~~ll~D~d~~VR~~aA~~l-------~~~--------~L~~L~~D~d~~VR~~aA~~l~-------~--------~~l 151 (244)
T 1lrv_A 102 QLSALMFDEDREVRITVADRL-------PLE--------QLEQMAADRDYLVRAYVVQRIP-------P--------GRL 151 (244)
T ss_dssp GGGGTTTCSCHHHHHHHHHHS-------CTG--------GGGGGTTCSSHHHHHHHHHHSC-------G--------GGG
T ss_pred HHHHHHcCCCHHHHHHHHHhC-------CHH--------HHHHHHcCCCHHHHHHHHHhcC-------H--------HHH
Confidence 467778889999999988864 221 3455578999999999888531 1 235
Q ss_pred HhhccCCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCCcchhhheeee-------cc---CCHHHHHHHH
Q 004157 449 SKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL-------SY---LNCDVRSKAF 518 (771)
Q Consensus 449 aklq~D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R~a~l~a-------~~---~~~~VR~~a~ 518 (771)
..+..|+++.||...+-- +. .+.+. ++++|+++.+|.+++.. .. ++..||..+-
T Consensus 152 ~~l~~D~d~~VR~~aa~~-------l~--------~~ll~-~ll~D~d~~VR~aaa~~l~~~~L~~Ll~D~d~~VR~~aa 215 (244)
T 1lrv_A 152 FRFMRDEDRQVRKLVAKR-------LP--------EESLG-LMTQDPEPEVRRIVASRLRGDDLLELLHDPDWTVRLAAV 215 (244)
T ss_dssp GGTTTCSCHHHHHHHHHH-------SC--------GGGGG-GSTTCSSHHHHHHHHHHCCGGGGGGGGGCSSHHHHHHHH
T ss_pred HHHHcCCCHHHHHHHHHc-------CC--------HHHHH-HHHcCCCHHHHHHHHHhCCHHHHHHHHcCCCHHHHHHHH
Confidence 567789999999988764 22 24566 78899999999988866 11 8899999998
Q ss_pred HHHH
Q 004157 519 QAVD 522 (771)
Q Consensus 519 ~~~~ 522 (771)
+.+.
T Consensus 216 ~~l~ 219 (244)
T 1lrv_A 216 EHAS 219 (244)
T ss_dssp HHSC
T ss_pred HcCC
Confidence 8876
|
| >3b2a_A TON_1937, putative uncharacterized protein; heat-repeats, hypothetical, unknown function; 2.20A {Thermococcus onnurineus} | Back alignment and structure |
|---|
Probab=93.22 E-value=1.4 Score=44.21 Aligned_cols=155 Identities=14% Similarity=0.120 Sum_probs=120.8
Q ss_pred hHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcCh---hhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCCh--hHH
Q 004157 366 VLPTIVKLFASNDRAIRVALLQHIDQYGQSFSA---QVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQ--RTI 440 (771)
Q Consensus 366 i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~---~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~--~~l 440 (771)
.+-.+..+....|+.+++..|.-+..+++..+. ...-+++||-++....+.+.-|--.++|.+-.++....- .+
T Consensus 34 ~l~~L~~LL~dkD~~vk~raL~~LeellK~~~~~l~~~~~e~~Ld~iI~llk~~dEkval~A~r~L~~LLe~vpL~~~~- 112 (265)
T 3b2a_A 34 ALFLILELAGEDDETTRLRAFVALGEILKRADSDLRMMVLERHLDVFINALSQENEKVTIKALRALGYLVKDVPMGSKT- 112 (265)
T ss_dssp HHHHHHHHTTSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTCCSTTHHHHHHHHHHHHHHHTTCCBCHHH-
T ss_pred HHHHHHHHHhccchHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHcCCCCCHHH-
Confidence 566788888899999999999999999988643 245566999999999999999888888888888776543 33
Q ss_pred hHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCCcchhhheeee-----cc-------
Q 004157 441 SGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL-----SY------- 508 (771)
Q Consensus 441 ~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R~a~l~a-----~~------- 508 (771)
-..+...|.-+-....+-+|-=++-.+|++ +.... .+-++..+. +.++-.......|||.+ .|
T Consensus 113 y~Kl~~aL~dlik~~~~il~~eaae~Lgkl-kv~~~---~~~V~~~l~-sLl~Skd~~vK~agl~~L~eia~~S~D~~i~ 187 (265)
T 3b2a_A 113 FLKAAKTLVSLLESPDDMMRIETIDVLSKL-QPLED---SKLVRTYIN-ELVVSPDLYTKVAGFCLFLNMLNSSADSGHL 187 (265)
T ss_dssp HHHHHHHHHHHTTSCCHHHHHHHHHHHHHC-CBSCC---CHHHHHHHH-HHHTCSSHHHHHHHHHHHHHHGGGCSSCCCG
T ss_pred HHHHHHHHHHHhcCCCchHHHHHHHHhCcC-Ccccc---hHHHHHHHH-HHHhCCChhHHHHHHHHHHHhhcccCCHHHH
Confidence 335666666666778888999999999999 33332 334577777 78898999999999988 22
Q ss_pred -------------CCHHHHHHHHHHHHHHHH
Q 004157 509 -------------LNCDVRSKAFQAVDQFLQ 526 (771)
Q Consensus 509 -------------~~~~VR~~a~~~~~~~l~ 526 (771)
.++.+++.|...++..+.
T Consensus 188 ~~I~~eI~elL~~eD~~l~e~aLd~Le~ils 218 (265)
T 3b2a_A 188 TLILDEIPSLLQNDNEFIVELALDVLEKALS 218 (265)
T ss_dssp GGTTTTHHHHHTCSCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHc
Confidence 789999999888876654
|
| >1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A | Back alignment and structure |
|---|
Probab=92.90 E-value=0.17 Score=61.79 Aligned_cols=121 Identities=11% Similarity=0.072 Sum_probs=89.5
Q ss_pred HHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcC------CCcHHHHHHHHHHHHhhccCCC-----hh------HH-
Q 004157 379 RAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFA------DTSAFLREMTLKSMLVLAPKLS-----QR------TI- 440 (771)
Q Consensus 379 r~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~------D~~~~iRe~tlk~i~~l~~kL~-----~~------~l- 440 (771)
..+|.+..+-|..+..+++ +.+-..+++.+...|. +.+-..||+++.++-.++.++. .. .+
T Consensus 375 ~s~R~aa~~~L~~l~~~~~-~~v~~~~l~~i~~~l~~~~~~~~~~w~~reaal~algaia~~~~~~~~~~~~~~~~~~l~ 453 (960)
T 1wa5_C 375 DTRRRACTDFLKELKEKNE-VLVTNIFLAHMKGFVDQYMSDPSKNWKFKDLYIYLFTALAINGNITNAGVSSTNNLLNVV 453 (960)
T ss_dssp -CHHHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHHHC----CHHHHHHHHHHHHHHHBSSCCBTTBCCCBCTTCCHH
T ss_pred cCcHHHHHHHHHHHHHHcc-hhHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHhccccCCcccccccccHH
Confidence 3688888888889999988 5556668888777676 5677899999999988876531 11 22
Q ss_pred ---hHHHHHHHHhhccCC---CCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCCcchhhheeee
Q 004157 441 ---SGSLLKYLSKLQVDE---EPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 441 ---~~~LL~~laklq~D~---~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R~a~l~a 506 (771)
.+.++|.| .|+ .+.||..++.|||+++..+.++. ..-+++++. +.|.|+..++|.+|..|
T Consensus 454 ~~l~~~v~p~l----~~~~~~~p~vr~~a~~~lg~~~~~~~~~~-l~~~l~~l~-~~L~d~~~~V~~~A~~A 519 (960)
T 1wa5_C 454 DFFTKEIAPDL----TSNNIPHIILRVDAIKYIYTFRNQLTKAQ-LIELMPILA-TFLQTDEYVVYTYAAIT 519 (960)
T ss_dssp HHHHHHTHHHH----HCSSCSCHHHHHHHHHHHHHTGGGSCHHH-HHHHHHHHH-HHTTCSCHHHHHHHHHH
T ss_pred HHHHHHhHHHh----cCCCCCCceehHHHHHHHHHHHhhCCHHH-HHHHHHHHH-HHhCCCChhHHHHHHHH
Confidence 23344444 345 89999999999999999996554 344577777 78999999999998888
|
| >3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A | Back alignment and structure |
|---|
Probab=92.64 E-value=0.23 Score=53.50 Aligned_cols=172 Identities=9% Similarity=0.054 Sum_probs=103.1
Q ss_pred hHHHHHHHHhcCCCC--chhhHHHHHhccCCChhhhh-----hhhHHHHHHh-hcCCcHHHHH---HHHHhHHHHHhhcC
Q 004157 329 LLPLLASALEFGSAA--APALTALLKMGSWLSTEEFS-----VKVLPTIVKL-FASNDRAIRV---ALLQHIDQYGQSFS 397 (771)
Q Consensus 329 ILP~Ll~~~~~~~~~--~~~L~~ll~i~~~l~~eef~-----~~i~P~i~~l-F~~~Dr~iR~---~LL~~l~~~~~~l~ 397 (771)
++|.|++.+..+... ..+...+..++.. +.++.. .-.+|.|+++ ....+..++- ..|.+|....+..-
T Consensus 128 aIp~LV~LL~s~~~~v~~~A~~aL~nLs~~-~~~~~k~~i~~~G~Ip~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~~nk 206 (354)
T 3nmw_A 128 CMRALVAQLKSESEDLQQVIASVLRNLSWR-ADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENK 206 (354)
T ss_dssp HHHHHHHGGGCSCHHHHHHHHHHHHHHHTT-CCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTCHHHH
T ss_pred cHHHHHHHHCCCCHHHHHHHHHHHHHHhcc-CCHHHHHHHHHCCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHccChhhh
Confidence 578888877644311 1122233333332 112222 2358888886 5666776664 34455443222222
Q ss_pred hhhh-hhccHHHHHhhcCCCcH----HHHHHHHHHHHhhccCC--Ch----hHHhHHHHHHHHhhccCCCCcchhhHHHH
Q 004157 398 AQVV-DEQVYPHVATGFADTSA----FLREMTLKSMLVLAPKL--SQ----RTISGSLLKYLSKLQVDEEPAIRTNTTIL 466 (771)
Q Consensus 398 ~~~v-~~~I~p~l~~gf~D~~~----~iRe~tlk~i~~l~~kL--~~----~~l~~~LL~~laklq~D~~~~IRtnt~ic 466 (771)
..++ ..-.+|.|+..+.+.++ .|++.+...+-.++..+ ++ ..+....+|.|-.+-.+.+..++.+++-+
T Consensus 207 ~~i~~~~Gai~~Lv~lL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~A~~a 286 (354)
T 3nmw_A 207 ADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNACGT 286 (354)
T ss_dssp HHHHHSTTHHHHHHHHTTCCCSSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHHHHHHHTTCSCHHHHHHHHHH
T ss_pred HHHHHhcCcHHHHHHHhccCCCcccHHHHHHHHHHHHHHHhhccCCHHHHHHHHHcCCHHHHHHHHcCCChHHHHHHHHH
Confidence 3344 56789999999987654 48887776666665311 11 22344567888888778888999999999
Q ss_pred HHHhhhccCcchhhHHh----HHHHHHhhhcCCCcchhhhe
Q 004157 467 LGNIASHLNEGTRKRVL----INAFTVRALRDTFSPARGAA 503 (771)
Q Consensus 467 l~kia~~L~~~~~~~vL----~~af~~~~lkD~f~~~R~a~ 503 (771)
|..|+.. +.+.++.++ +|.+. ..|+.....+|..|
T Consensus 287 L~nLa~~-~~~~~~~i~~~G~i~~Lv-~LL~s~~~~i~~~A 325 (354)
T 3nmw_A 287 LWNLSAR-NPKDQEALWDMGAVSMLK-NLIHSKHKMIAMGS 325 (354)
T ss_dssp HHHHTSS-CHHHHHHHHHTTHHHHHH-TTTTCSSHHHHHHH
T ss_pred HHHHhCC-CHHHHHHHHHCCCHHHHH-HHHhCCCHHHHHHH
Confidence 9999853 344555444 77777 77776654444433
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=92.58 E-value=1.9 Score=45.02 Aligned_cols=28 Identities=11% Similarity=0.109 Sum_probs=24.7
Q ss_pred CCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 148 CKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 148 ~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
..++|||+++.||+++ + .+.|+||+.+.
T Consensus 195 ~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~ 222 (328)
T 1zyl_A 195 VLRLHGDCHAGNILWR-D-GPMFVDLDDAR 222 (328)
T ss_dssp CEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred eeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence 4689999999999998 4 89999999875
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=92.29 E-value=0.21 Score=51.72 Aligned_cols=70 Identities=11% Similarity=0.093 Sum_probs=43.6
Q ss_pred cCCCCCCCCceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCC---CeeEEeeeEEecccCcCCccc
Q 004157 24 GDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHP---NILAFLHSTEVENIDATSTKI 100 (771)
Q Consensus 24 ~e~ig~G~g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHP---nIlkv~d~~e~e~~d~~~~~~ 100 (771)
.+++|.|. .+.||+.+. .||++|.+|+....... ....+..|++.|+.|.-- -+.+++... +
T Consensus 20 v~~~g~G~-~~~vyrv~l-~DG~~~~vK~~~~~~~~--~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~--~--------- 84 (288)
T 3f7w_A 20 VAERGHSH-RWHLYRVEL-ADGTPLFVKALPDDAPA--LDGLFRAEALGLDWLGRSFGSPVPQVAGWD--D--------- 84 (288)
T ss_dssp EEEEEEET-TEEEEEEEE-TTSCEEEEEECCTTCCC--CTTHHHHHHHHHHHHTCSTTCCSCCEEEEE--T---------
T ss_pred EEecCCCC-CeEEEEEEE-CCCCEEEEEEeCCCCcc--hhhHHHHHHHHHHHHHhhCCCCcceEEecc--C---------
Confidence 44556553 348999985 47899999986543221 123467888888888521 234444431 1
Q ss_pred EEEEEecCC
Q 004157 101 TIYIVTEPV 109 (771)
Q Consensus 101 ~iyIVtE~v 109 (771)
-++|||++
T Consensus 85 -~~lv~e~l 92 (288)
T 3f7w_A 85 -RTLAMEWV 92 (288)
T ss_dssp -TEEEEECC
T ss_pred -ceEEEEee
Confidence 27899998
|
| >3tjz_B Coatomer subunit gamma; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus} | Back alignment and structure |
|---|
Probab=92.19 E-value=1.5 Score=47.06 Aligned_cols=130 Identities=13% Similarity=0.117 Sum_probs=99.6
Q ss_pred hhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHH
Q 004157 365 KVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSL 444 (771)
Q Consensus 365 ~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~L 444 (771)
.+...|.+-...++.-+|-..|.-|..+ -...+-+.|.+.+-+++.|.+|.||..++-++.+++++-.+ . ....
T Consensus 104 Lv~Nsl~kDl~~~N~~iR~lALRtL~~I----~~~~m~~~l~~~lk~~L~d~~pyVRk~A~l~~~kL~~~~pe-~-v~~~ 177 (355)
T 3tjz_B 104 IVTSSLTKDMTGKEDSYRGPAVRALCQI----TDSTMLQAIERYMKQAIVDKVPSVSSSALVSSLHLLKCSFD-V-VKRW 177 (355)
T ss_dssp GGHHHHHHHHHSSCHHHHHHHHHHHHHH----CCTTTHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHTTTCHH-H-HHTT
T ss_pred HHHHHHHhhcCCCcHhHHHHHHHHHhcC----CCHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhccCHH-H-HHHH
Confidence 6778888888888889998888766655 33445667999999999999999999999999999987544 3 3457
Q ss_pred HHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHh-hhcCCCcchhhhe
Q 004157 445 LKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVR-ALRDTFSPARGAA 503 (771)
Q Consensus 445 L~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~-~lkD~f~~~R~a~ 503 (771)
+..+..+..|.++.|-.|++-++..|..+ +... ..-|++.|. + .+++|+..+.+.-
T Consensus 178 ~~~l~~ll~d~n~~V~~~Al~lL~ei~~~-d~~a-~~kLv~~l~-~~~l~~~~~q~~llr 234 (355)
T 3tjz_B 178 VNEAQEAASSDNIMVQYHALGLLYHVRKN-DRLA-VSKMISKFT-RHGLKSPFAYCMMIR 234 (355)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHHHTT-CHHH-HHHHHHHHH-SSCCSCHHHHHHHHH
T ss_pred HHHHHHHhcCCCccHHHHHHHHHHHHHhh-chHH-HHHHHHHHh-cCCCcChHHHHHHHH
Confidence 77888888899999999999999999764 2222 223567777 5 3667777665543
|
| >3b2a_A TON_1937, putative uncharacterized protein; heat-repeats, hypothetical, unknown function; 2.20A {Thermococcus onnurineus} | Back alignment and structure |
|---|
Probab=90.45 E-value=2.8 Score=42.08 Aligned_cols=211 Identities=16% Similarity=0.124 Sum_probs=143.5
Q ss_pred hccCChhhHHhhhhhchhhhcCCChh---hhhhhhHHHHHHHHhcCCC--CchhhHHH--HHhccCCChhhhhhhhHHHH
Q 004157 298 LNLKDSVEKDTFFRKLPNLAEQLPRQ---IVLKKLLPLLASALEFGSA--AAPALTAL--LKMGSWLSTEEFSVKVLPTI 370 (771)
Q Consensus 298 l~~k~~~eK~~F~~~L~~~l~~fP~~---~~~~kILP~Ll~~~~~~~~--~~~~L~~l--l~i~~~l~~eef~~~i~P~i 370 (771)
++.+++.-|..-+--|.+++...|.. ....++||-+++....... ...++-.+ +--+..++.+.| .++.-.+
T Consensus 42 L~dkD~~vk~raL~~LeellK~~~~~l~~~~~e~~Ld~iI~llk~~dEkval~A~r~L~~LLe~vpL~~~~y-~Kl~~aL 120 (265)
T 3b2a_A 42 AGEDDETTRLRAFVALGEILKRADSDLRMMVLERHLDVFINALSQENEKVTIKALRALGYLVKDVPMGSKTF-LKAAKTL 120 (265)
T ss_dssp TTSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTCCSTTHHHHHHHHHHHHHHHTTCCBCHHHH-HHHHHHH
T ss_pred HhccchHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHcCCCCCHHHH-HHHHHHH
Confidence 45677777766666667777766543 3345567777765543321 11233333 333556778888 5677788
Q ss_pred HHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHHHHHHh
Q 004157 371 VKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSK 450 (771)
Q Consensus 371 ~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL~~lak 450 (771)
..+...++.-.+..+.+.+..+ .......+|...+...+.+.+..++.+.++.+..++.+=++..+.+.+++-+.-
T Consensus 121 ~dlik~~~~il~~eaae~Lgkl----kv~~~~~~V~~~l~sLl~Skd~~vK~agl~~L~eia~~S~D~~i~~~I~~eI~e 196 (265)
T 3b2a_A 121 VSLLESPDDMMRIETIDVLSKL----QPLEDSKLVRTYINELVVSPDLYTKVAGFCLFLNMLNSSADSGHLTLILDEIPS 196 (265)
T ss_dssp HHHTTSCCHHHHHHHHHHHHHC----CBSCCCHHHHHHHHHHHTCSSHHHHHHHHHHHHHHGGGCSSCCCGGGTTTTHHH
T ss_pred HHHhcCCCchHHHHHHHHhCcC----CcccchHHHHHHHHHHHhCCChhHHHHHHHHHHHhhcccCCHHHHHHHHHHHHH
Confidence 8888888888888888877776 333334567777788889999999999999999999998888777788888888
Q ss_pred hccCCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCCcchhhheeeeccCCHHHHHHHHHHHHHH
Q 004157 451 LQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKILSYLNCDVRSKAFQAVDQF 524 (771)
Q Consensus 451 lq~D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R~a~l~a~~~~~~VR~~a~~~~~~~ 524 (771)
+-.-+++.||--++-.+..|+.+=-.+ + +++.|. +.++ +.-+|---|..+.+|+.|..+.+.+
T Consensus 197 lL~~eD~~l~e~aLd~Le~ils~pi~~---~-~~~~~~-~~~~------~v~~l~~~~~~~~~~~ka~~v~~~l 259 (265)
T 3b2a_A 197 LLQNDNEFIVELALDVLEKALSFPLLE---N-VKIELL-KISR------IVDGLVYREGAPIIRLKAKKVSDLI 259 (265)
T ss_dssp HHTCSCHHHHHHHHHHHHHHTTSCCCS---C-CHHHHH-HHHH------HHHHGGGCSSCHHHHHHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHHHHHHHcCcccH---h-HHHHHH-HHHH------HHHHHHHhcCChhHHHHHHHHHHHH
Confidence 777779999999999998888774332 2 344444 3322 0111110237889999999887653
|
| >1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24 | Back alignment and structure |
|---|
Probab=89.26 E-value=4.2 Score=44.95 Aligned_cols=162 Identities=13% Similarity=0.123 Sum_probs=105.5
Q ss_pred hHHHHHHHHhcCCCCc--hhhHHHHHhccCCCh---hhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhh---cChhh
Q 004157 329 LLPLLASALEFGSAAA--PALTALLKMGSWLST---EEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQS---FSAQV 400 (771)
Q Consensus 329 ILP~Ll~~~~~~~~~~--~~L~~ll~i~~~l~~---eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~---l~~~~ 400 (771)
-+|.|+..+..+.... .++..+-.++..-+. .-...-.+|.++++..+.+..++...+.-|..+... ....+
T Consensus 3 ~l~~lv~~L~s~~~~~q~~A~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~~k~~i 82 (457)
T 1xm9_A 3 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 82 (457)
T ss_dssp CHHHHHHHHHSSCTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHH
T ss_pred CHHHHHHHHCCCCHHHHHHHHHHHHHHHcCChHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 3677777777553211 123333344432221 223445789999999999988887666666666542 22334
Q ss_pred hhhccHHHHHhhcC-CCcHHHHHHHHHHHHhhccC--CChhHHhHHHHHHHHhhcc--------C--------CCCcchh
Q 004157 401 VDEQVYPHVATGFA-DTSAFLREMTLKSMLVLAPK--LSQRTISGSLLKYLSKLQV--------D--------EEPAIRT 461 (771)
Q Consensus 401 v~~~I~p~l~~gf~-D~~~~iRe~tlk~i~~l~~k--L~~~~l~~~LL~~laklq~--------D--------~~~~IRt 461 (771)
+..-.+|.|+..+. +.++.+|+.++..+-.++.. .....+. ..+|.|.++-. + .+..|+.
T Consensus 83 ~~~G~i~~Lv~lL~~~~~~~~~~~a~~aL~nLa~~~~~~~~i~~-g~i~~Lv~ll~~~~s~~~~~~~~~~~e~~~~~v~~ 161 (457)
T 1xm9_A 83 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFF 161 (457)
T ss_dssp HHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSSSTHHHHHH-HHHHHHHHHTTHHHHTCC---------CCCHHHHH
T ss_pred HHcCCHHHHHHHHhhCCCHHHHHHHHHHHHHHhcCHHhHHHHHh-ccHHHHHHHHhccccccccCccchhcccccHHHHH
Confidence 56667999999999 77999999999999888865 2222445 77787777662 2 2345666
Q ss_pred hHHHHHHHhhhccCcchhhHH-----hHHHHHHhhhcC
Q 004157 462 NTTILLGNIASHLNEGTRKRV-----LINAFTVRALRD 494 (771)
Q Consensus 462 nt~icl~kia~~L~~~~~~~v-----L~~af~~~~lkD 494 (771)
|++-+|..|+.. .+.|..+ +++.+. ..|++
T Consensus 162 ~a~~aL~nLs~~--~~~~~~i~~~~g~i~~Lv-~lL~~ 196 (457)
T 1xm9_A 162 NATGCLRNLSSA--DAGRQTMRNYSGLIDSLM-AYVQN 196 (457)
T ss_dssp HHHHHHHHHTTS--HHHHHHHTTSTTHHHHHH-HHHHH
T ss_pred HHHHHHHHHccC--HHHHHHHHHcCCCHHHHH-HHHHh
Confidence 999999999986 4455443 356666 66663
|
| >1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A | Back alignment and structure |
|---|
Probab=89.02 E-value=1.2 Score=54.37 Aligned_cols=115 Identities=12% Similarity=0.110 Sum_probs=78.5
Q ss_pred hhhhhhhHHHHHHhhc------CCcHHHHHHHHHhHHHHHhhcC-hh----------hhhhccHHHHHhhcCCC---cHH
Q 004157 360 EEFSVKVLPTIVKLFA------SNDRAIRVALLQHIDQYGQSFS-AQ----------VVDEQVYPHVATGFADT---SAF 419 (771)
Q Consensus 360 eef~~~i~P~i~~lF~------~~Dr~iR~~LL~~l~~~~~~l~-~~----------~v~~~I~p~l~~gf~D~---~~~ 419 (771)
+.....+++.|...|. ..+|..|-..|--|-.+.++.. .+ .+..-+..+++..+.|. .+.
T Consensus 394 ~~v~~~~l~~i~~~l~~~~~~~~~~w~~reaal~algaia~~~~~~~~~~~~~~~~~~l~~~l~~~v~p~l~~~~~~~p~ 473 (960)
T 1wa5_C 394 VLVTNIFLAHMKGFVDQYMSDPSKNWKFKDLYIYLFTALAINGNITNAGVSSTNNLLNVVDFFTKEIAPDLTSNNIPHII 473 (960)
T ss_dssp HHHHHHHHHHHHHHHHHHHC----CHHHHHHHHHHHHHHHBSSCCBTTBCCCBCTTCCHHHHHHHHTHHHHHCSSCSCHH
T ss_pred hhHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHhccccCCcccccccccHHHHHHHHhHHHhcCCCCCCce
Confidence 3344455666666676 6788888777777777765531 11 12111122344445666 999
Q ss_pred HHHHHHHHHHhhccCCChhHHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccC
Q 004157 420 LREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLN 475 (771)
Q Consensus 420 iRe~tlk~i~~l~~kL~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~ 475 (771)
||..++..+-.++..+... ....+|+.+.+...|+++.||+.++.+|..++....
T Consensus 474 vr~~a~~~lg~~~~~~~~~-~l~~~l~~l~~~L~d~~~~V~~~A~~Al~~~~~~~~ 528 (960)
T 1wa5_C 474 LRVDAIKYIYTFRNQLTKA-QLIELMPILATFLQTDEYVVYTYAAITIEKILTIRE 528 (960)
T ss_dssp HHHHHHHHHHHTGGGSCHH-HHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTCBS
T ss_pred ehHHHHHHHHHHHhhCCHH-HHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHhccc
Confidence 9999999999999988654 466788877766678889999999999999887643
|
| >1lrv_A LRV, leucine-rich repeat variant; leucine-rich repeats, repetitive structure, iron sulfur proteins, nitrogen fixation; 2.60A {Azotobacter vinelandii} SCOP: a.118.1.5 | Back alignment and structure |
|---|
Probab=88.65 E-value=0.18 Score=51.36 Aligned_cols=104 Identities=19% Similarity=0.189 Sum_probs=61.6
Q ss_pred HHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHHHHHH
Q 004157 370 IVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLS 449 (771)
Q Consensus 370 i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL~~la 449 (771)
+..+...+++.||..+..+ ++. +.+...++|.++.||...+..+ .. +.|.
T Consensus 127 L~~L~~D~d~~VR~~aA~~-------l~~--------~~l~~l~~D~d~~VR~~aa~~l-------~~--------~ll~ 176 (244)
T 1lrv_A 127 LEQMAADRDYLVRAYVVQR-------IPP--------GRLFRFMRDEDRQVRKLVAKRL-------PE--------ESLG 176 (244)
T ss_dssp GGGGTTCSSHHHHHHHHHH-------SCG--------GGGGGTTTCSCHHHHHHHHHHS-------CG--------GGGG
T ss_pred HHHHHcCCCHHHHHHHHHh-------cCH--------HHHHHHHcCCCHHHHHHHHHcC-------CH--------HHHH
Confidence 4556667777777777663 222 1334566777777777777652 11 2244
Q ss_pred hhccCCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCCcchhhheeee-------cc--CCHHHHHHHHH
Q 004157 450 KLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL-------SY--LNCDVRSKAFQ 519 (771)
Q Consensus 450 klq~D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R~a~l~a-------~~--~~~~VR~~a~~ 519 (771)
.+..|+++.||.+.+.- |. .+++. .+++|+.+.+|.++..+ .. ++..||..|.+
T Consensus 177 ~ll~D~d~~VR~aaa~~-------l~--------~~~L~-~Ll~D~d~~VR~~aa~~l~~~~L~~L~D~~~~VR~aa~~ 239 (244)
T 1lrv_A 177 LMTQDPEPEVRRIVASR-------LR--------GDDLL-ELLHDPDWTVRLAAVEHASLEALRELDEPDPEVRLAIAG 239 (244)
T ss_dssp GSTTCSSHHHHHHHHHH-------CC--------GGGGG-GGGGCSSHHHHHHHHHHSCHHHHHHCCCCCHHHHHHHHC
T ss_pred HHHcCCCHHHHHHHHHh-------CC--------HHHHH-HHHcCCCHHHHHHHHHcCCHHHHHHccCCCHHHHHHHHH
Confidence 56667777777766643 11 13455 66677777777776665 11 56666666654
|
| >2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B | Back alignment and structure |
|---|
Probab=87.31 E-value=2.4 Score=51.44 Aligned_cols=121 Identities=11% Similarity=0.135 Sum_probs=84.7
Q ss_pred HHHHHHHhHHHHHhhcChhhhhhccHHHHHhhc----CCCcHHHHHHHHHHHHhhccCCChh--HHhHHHHHHHHhhccC
Q 004157 381 IRVALLQHIDQYGQSFSAQVVDEQVYPHVATGF----ADTSAFLREMTLKSMLVLAPKLSQR--TISGSLLKYLSKLQVD 454 (771)
Q Consensus 381 iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf----~D~~~~iRe~tlk~i~~l~~kL~~~--~l~~~LL~~laklq~D 454 (771)
.|....+-|..+...+.. .+-..+++.+...+ .+.+...||+++-++-.++..+.+. .....+++.|..+..
T Consensus 423 ~r~~~~~~L~~~~~~~~~-~~l~~~~~~l~~~l~~~~~~~~w~~~eaal~al~~i~~~~~~~~~~~l~~l~~~l~~l~~- 500 (963)
T 2x19_B 423 YRVDISDTLMYVYEMLGA-ELLSNLYDKLGRLLTSSEEPYSWQHTEALLYGFQSIAETIDVNYSDVVPGLIGLIPRISI- 500 (963)
T ss_dssp HHHHHHHHHHHHHHHHTH-HHHHHHHHHHHHHHHTCCCSCCHHHHHHHHHHHHHHTTSCCSSCCSHHHHHHHHGGGSCC-
T ss_pred HHHHHHHHHHHHHHHccH-HHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHhhcCchhhHHHHHHHHHHHhCCC-
Confidence 355555556666655553 34455666666666 6778899999999999999988752 344567777766654
Q ss_pred CCCcchhhHHHHHHHhhhccCcc-hhhHHhHHHHHHhhhcCCCcchhhheeee
Q 004157 455 EEPAIRTNTTILLGNIASHLNEG-TRKRVLINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 455 ~~~~IRtnt~icl~kia~~L~~~-~~~~vL~~af~~~~lkD~f~~~R~a~l~a 506 (771)
+.+.||..++.+||+.+.++... .--..+++.+. ..|.| +.+|.+|..+
T Consensus 501 ~~~~vr~~~~~~l~~~~~~l~~~~~~l~~vl~~l~-~~l~~--~~V~~~A~~a 550 (963)
T 2x19_B 501 SNVQLADTVMFTIGALSEWLADHPVMINSVLPLVL-HALGN--PELSVSSVST 550 (963)
T ss_dssp CSHHHHHHHHHHHHHTHHHHHHCHHHHTTTHHHHH-HHTTC--GGGHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH-HHhCC--chHHHHHHHH
Confidence 57889999999999999998754 22334577777 78877 4555555554
|
| >2x1g_F Cadmus; transport protein, developmental protein, mRNA processing, nuclear transport, mRNA splicing, mRNA transport; 3.35A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=86.47 E-value=5.4 Score=48.40 Aligned_cols=112 Identities=10% Similarity=0.072 Sum_probs=61.7
Q ss_pred hhhhhhhHHHHHHhhcC-----CcHHHHHHHHHhHHHHHhhcChhh--hhhccHHHHHhhcC--CCcHHHHHHHHHHHHh
Q 004157 360 EEFSVKVLPTIVKLFAS-----NDRAIRVALLQHIDQYGQSFSAQV--VDEQVYPHVATGFA--DTSAFLREMTLKSMLV 430 (771)
Q Consensus 360 eef~~~i~P~i~~lF~~-----~Dr~iR~~LL~~l~~~~~~l~~~~--v~~~I~p~l~~gf~--D~~~~iRe~tlk~i~~ 430 (771)
++.-..+++.|...+.. .+|..|-..|--|-.+++.+.... .-.+|++ ++..+. |..+.||..++..+-.
T Consensus 454 ~~~l~~~~~~l~~~l~~~~~~~~~w~~~eaal~~l~~iae~~~~~~~~~l~~l~~-~l~~l~~~d~~~~vr~~a~~~l~~ 532 (971)
T 2x1g_F 454 DYILEILAAMLDEAIADLQRHPTHWTKLEACIYSFQSVAEHFGGEEKRQIPRLMR-VLAEIPYEKLNVKLLGTALETMGS 532 (971)
T ss_dssp THHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHTTTC------CHHHHHHH-HHHHSCTTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHHhhcChhhhHHHHHHHH-HHHhcCccccCHHHHHHHHHHHHH
Confidence 34444555555555443 566666555555666666665432 2233455 333334 5678888888887777
Q ss_pred hccCCChh-HHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccC
Q 004157 431 LAPKLSQR-TISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLN 475 (771)
Q Consensus 431 l~~kL~~~-~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~ 475 (771)
+..-+... .....+|++|.+.- | +.|+..++.+|.+|+....
T Consensus 533 ~~~~l~~~~~~l~~vl~~l~~~l-~--~~v~~~A~~al~~l~~~~~ 575 (971)
T 2x1g_F 533 YCNWLMENPAYIPPAINLLVRGL-N--SSMSAQATLGLKELCRDCQ 575 (971)
T ss_dssp THHHHC----CHHHHHHHHHHHH-H--SSCHHHHHHHHHHHHHHCH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHh-C--hHHHHHHHHHHHHHHHHHH
Confidence 77665532 23344555554433 4 6788888888888776543
|
| >2x1g_F Cadmus; transport protein, developmental protein, mRNA processing, nuclear transport, mRNA splicing, mRNA transport; 3.35A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=86.04 E-value=2.2 Score=51.94 Aligned_cols=122 Identities=16% Similarity=0.122 Sum_probs=82.9
Q ss_pred HHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCC-----CcHHHHHHHHHHHHhhccCCChhH--HhHHHHHHHHhhc
Q 004157 380 AIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFAD-----TSAFLREMTLKSMLVLAPKLSQRT--ISGSLLKYLSKLQ 452 (771)
Q Consensus 380 ~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D-----~~~~iRe~tlk~i~~l~~kL~~~~--l~~~LL~~laklq 452 (771)
..|....+-+..+...++ +.+-..+++.+...+.. .+-..||+++.++-.++..+.... ....+++.|..+.
T Consensus 436 ~~R~~~~~~l~~~~~~~~-~~~l~~~~~~l~~~l~~~~~~~~~w~~~eaal~~l~~iae~~~~~~~~~l~~l~~~l~~l~ 514 (971)
T 2x1g_F 436 CYRQDISDTFMYCYDVLN-DYILEILAAMLDEAIADLQRHPTHWTKLEACIYSFQSVAEHFGGEEKRQIPRLMRVLAEIP 514 (971)
T ss_dssp HHHHHHHHHHHHHHTTCT-THHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHTTTC------CHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHHhhcChhhhHHHHHHHHHHHhcC
Confidence 456777777777777776 44555677766666543 566899999999999999887632 3445777777776
Q ss_pred c-CCCCcchhhHHHHHHHhhhccCcch-hhHHhHHHHHHhhhcCCCcchhhheeee
Q 004157 453 V-DEEPAIRTNTTILLGNIASHLNEGT-RKRVLINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 453 ~-D~~~~IRtnt~icl~kia~~L~~~~-~~~vL~~af~~~~lkD~f~~~R~a~l~a 506 (771)
. |..+.||..++-+||+++.++.... --.-+++.+. +.| | +.++.+|..+
T Consensus 515 ~~d~~~~vr~~a~~~l~~~~~~l~~~~~~l~~vl~~l~-~~l-~--~~v~~~A~~a 566 (971)
T 2x1g_F 515 YEKLNVKLLGTALETMGSYCNWLMENPAYIPPAINLLV-RGL-N--SSMSAQATLG 566 (971)
T ss_dssp TTTSCHHHHHHHHHHHHHTHHHHC----CHHHHHHHHH-HHH-H--SSCHHHHHHH
T ss_pred ccccCHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH-HHh-C--hHHHHHHHHH
Confidence 4 6789999999999999999998532 2334466666 677 6 5566666555
|
| >3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A | Back alignment and structure |
|---|
Probab=85.71 E-value=2.1 Score=49.08 Aligned_cols=131 Identities=11% Similarity=0.089 Sum_probs=93.6
Q ss_pred hhhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhc---ChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCC
Q 004157 359 TEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSF---SAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKL 435 (771)
Q Consensus 359 ~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l---~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL 435 (771)
...|...-+|.++.+..+.|..++......|..+...- ...++..-.+|.|+..+.+.+..+|+.++.++-.|+-.=
T Consensus 42 ~~~~~~~~i~~LV~~L~s~~~~~q~~Aa~~L~~La~~~~~~k~~V~~~G~Ip~LV~LL~s~~~~vq~~Aa~AL~nLa~~~ 121 (584)
T 3l6x_A 42 PPNWRQPELPEVIAMLGFRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNISFGR 121 (584)
T ss_dssp CCCCCCCCHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHGGGCSSHHHHHHHHHHHHHHTSSS
T ss_pred CCCcccccHHHHHHHHCCCCHHHHHHHHHHHHHHHcCChHHHHHHHHcCCcHHHHHHHCCCCHHHHHHHHHHHHHHHccC
Confidence 34567777899999988888888776666665555322 223555667899999999999999999999999988531
Q ss_pred Ch----hHHhHHHHHHHHhhccC-CCCcchhhHHHHHHHhhhccCcchhhHHh---HHHHHHhhh
Q 004157 436 SQ----RTISGSLLKYLSKLQVD-EEPAIRTNTTILLGNIASHLNEGTRKRVL---INAFTVRAL 492 (771)
Q Consensus 436 ~~----~~l~~~LL~~laklq~D-~~~~IRtnt~icl~kia~~L~~~~~~~vL---~~af~~~~l 492 (771)
+. ..+....+|.|-++-.. ....++-+++-||..|+. ..+.+..++ +|.+. +.|
T Consensus 122 ~~~nk~~I~~~GaIp~LV~LL~s~~~~~~~e~aa~aL~nLS~--~~~~k~~I~~~alp~Lv-~LL 183 (584)
T 3l6x_A 122 DQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSS--HDSIKMEIVDHALHALT-DEV 183 (584)
T ss_dssp CHHHHHHHHHTTHHHHHHHHHHHCCSHHHHHHHHHHHHHHTT--SGGGHHHHHHHTHHHHH-HHT
T ss_pred CHHHHHHHHHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHhC--CchhhHHHHhccHHHHH-HHH
Confidence 12 23344456666665553 567899999999999997 445555543 66666 655
|
| >3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=85.24 E-value=1.4 Score=49.03 Aligned_cols=175 Identities=9% Similarity=0.041 Sum_probs=105.9
Q ss_pred hHHHHHHHHhcCCCC--chhhHHHHHhccCCChhhhh-----hhhHHHHHHh-hcCCcHHHHH---HHHHhHHHHHhhcC
Q 004157 329 LLPLLASALEFGSAA--APALTALLKMGSWLSTEEFS-----VKVLPTIVKL-FASNDRAIRV---ALLQHIDQYGQSFS 397 (771)
Q Consensus 329 ILP~Ll~~~~~~~~~--~~~L~~ll~i~~~l~~eef~-----~~i~P~i~~l-F~~~Dr~iR~---~LL~~l~~~~~~l~ 397 (771)
.+|.|++.+..+... ..+...+..++.. +.++.. .-.+|.|+++ ....+..++- ..|.||....+...
T Consensus 244 aIp~LV~LL~s~~~~v~~~A~~aL~nLs~~-~~~~~k~~I~~~GaI~~LV~lLl~s~~~~v~~~A~~aL~nLs~~~~~nk 322 (458)
T 3nmz_A 244 CMRALVAQLKSESEDLQQVIASVLRNLSWR-ADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENK 322 (458)
T ss_dssp HHHHHHHGGGCSCHHHHHHHHHHHHHHTSS-CCHHHHHHHHHTTHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHCHHHH
T ss_pred cHHHHHHHHhCCCHHHHHHHHHHHHHHhcC-CCHHHHHHHHHcCCHHHHHHHHhcCCCHHHHHHHHHHHHHHccCCHHHH
Confidence 588888877643211 1122223333332 112222 2357888886 5656766654 34555554332222
Q ss_pred hhhh-hhccHHHHHhhcCCCcH----HHHHHHHHHHHhhccC--CCh----hHHhHHHHHHHHhhccCCCCcchhhHHHH
Q 004157 398 AQVV-DEQVYPHVATGFADTSA----FLREMTLKSMLVLAPK--LSQ----RTISGSLLKYLSKLQVDEEPAIRTNTTIL 466 (771)
Q Consensus 398 ~~~v-~~~I~p~l~~gf~D~~~----~iRe~tlk~i~~l~~k--L~~----~~l~~~LL~~laklq~D~~~~IRtnt~ic 466 (771)
..++ ..-.+|.|+..+.+... .|++.+...+-.++.. -++ ..+....+|.|-.+-.+.+..|+.+++-+
T Consensus 323 ~~I~~~~Gal~~Lv~LL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~G~i~~Lv~LL~~~~~~v~~~A~~a 402 (458)
T 3nmz_A 323 ADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNACGT 402 (458)
T ss_dssp HHHHHSTTHHHHHHHHTTCCCSSSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHSSCSCHHHHHHHHHH
T ss_pred HHHHHhcCcHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHhcccCCHHHHHHHHHcccHHHHHHHHcCCChHHHHHHHHH
Confidence 3444 56789999999987654 4888777766666531 111 22344578888888888888999999999
Q ss_pred HHHhhhccCcchhhHHh----HHHHHHhhhcCCCcchhhheeee
Q 004157 467 LGNIASHLNEGTRKRVL----INAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 467 l~kia~~L~~~~~~~vL----~~af~~~~lkD~f~~~R~a~l~a 506 (771)
|+.|+.. +.+.+..++ ++.+. ..|+.....+|..|..|
T Consensus 403 L~nLa~~-~~~~~~~i~~~G~I~~Lv-~LL~s~~~~v~~~Aa~A 444 (458)
T 3nmz_A 403 LWNLSAR-NPKDQEALWDMGAVSMLK-NLIHSKHKMIAMGSAAA 444 (458)
T ss_dssp HHHHHSS-CHHHHHHHHHHTHHHHHH-TTTTCSSHHHHHHHHHH
T ss_pred HHHHHcC-CHHHHHHHHHCCCHHHHH-HHHhCCCHHHHHHHHHH
Confidence 9999853 344555444 67777 77877665555554443
|
| >3gs3_A Symplekin, LD45768P; helix-turn-helix heat repeat extended loop, transcription, protein binding; 2.40A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=84.07 E-value=4.8 Score=41.07 Aligned_cols=118 Identities=14% Similarity=0.126 Sum_probs=82.5
Q ss_pred hccCCCh--hhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHh
Q 004157 353 MGSWLST--EEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLV 430 (771)
Q Consensus 353 i~~~l~~--eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~ 430 (771)
||+.+++ .+=..+|+..+...=...| ..++..|.....++-+-+++ +-+++++.++..-.|.+..||...+..+..
T Consensus 2 ~~~~~~~~~~~~~~~v~~lln~A~~~~~-~~kl~~L~qa~el~~~~dp~-ll~~~l~~il~~~~~~~~~vrk~~~~Fi~e 79 (257)
T 3gs3_A 2 IGSGTDEKTATARAKVVDWCNELVIASP-STKCELLAKVQETVLGSCAE-LAEEFLESVLSLAHDSNMEVRKQVVAFVEQ 79 (257)
T ss_dssp -------CHHHHHHHHHHHHHHHTTCCH-HHHHHHHHHHHHHHTTTTGG-GHHHHHHHHHGGGGCSCHHHHHHHHHHHHH
T ss_pred CccccccccccHHHHHHHHHHHhhhcCc-HHHHHHHHHHHHHHHccCHh-HHHHHHHHHHHhccCChHHHHHHHHHHHHH
Confidence 4555544 2344567777766655566 68888998888877776666 567788888887788889999988888877
Q ss_pred hccCCChhHHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhcc
Q 004157 431 LAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHL 474 (771)
Q Consensus 431 l~~kL~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L 474 (771)
.+.+ +..+...+++.|..|..|+++.|--+++.|.+.|=+..
T Consensus 80 ~~~~--k~~l~~~~l~~L~~Ll~d~d~~V~K~~I~~~~~iY~~~ 121 (257)
T 3gs3_A 80 VCKV--KVELLPHVINVVSMLLRDNSAQVIKRVIQACGSIYKNG 121 (257)
T ss_dssp HHHH--CGGGHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHH--HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 7632 34567778888888888888888888888877665543
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=82.31 E-value=0.41 Score=50.07 Aligned_cols=41 Identities=15% Similarity=0.187 Sum_probs=31.0
Q ss_pred HHHHHHHHHc------CCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 137 IAKAVSFLNN------DCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 137 I~~aL~fLH~------~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
+...+.+++. ..+++|||+++.||+++.++.+.|+||+.+.
T Consensus 170 l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 170 IRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp HHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 3445555542 2469999999999999887666899999874
|
| >4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N | Back alignment and structure |
|---|
Probab=82.13 E-value=3 Score=50.26 Aligned_cols=89 Identities=17% Similarity=0.208 Sum_probs=65.9
Q ss_pred HHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHHhHHHH
Q 004157 408 HVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAF 487 (771)
Q Consensus 408 ~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af 487 (771)
.|-....|.+..||..++-+|-.|...= + . .+.+.+..|..+.++.||-.+++.||.|+. ++-..-.+..+
T Consensus 582 LL~~~~~d~~d~VRraAViaLGlI~~g~-~-e---~v~rlv~~L~~~~d~~VR~gAalALGli~a----Gn~~~~aid~L 652 (963)
T 4ady_A 582 LLHVAVSDSNDDVRRAAVIALGFVLLRD-Y-T---TVPRIVQLLSKSHNAHVRCGTAFALGIACA----GKGLQSAIDVL 652 (963)
T ss_dssp HHHHHHHCSCHHHHHHHHHHHHHHTSSS-C-S---SHHHHTTTGGGCSCHHHHHHHHHHHHHHTS----SSCCHHHHHHH
T ss_pred HHHHhccCCcHHHHHHHHHHHHhhccCC-H-H---HHHHHHHHHHhcCCHHHHHHHHHHHHHhcc----CCCcHHHHHHH
Confidence 4444456888899999999888765442 2 1 245556667778899999999999999873 22223456678
Q ss_pred HHhhhcCCCcchhhheeee
Q 004157 488 TVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 488 ~~~~lkD~f~~~R~a~l~a 506 (771)
. ++++|+...+|.+|+.|
T Consensus 653 ~-~L~~D~d~~Vrq~Ai~A 670 (963)
T 4ady_A 653 D-PLTKDPVDFVRQAAMIA 670 (963)
T ss_dssp H-HHHTCSSHHHHHHHHHH
T ss_pred H-HHccCCCHHHHHHHHHH
Confidence 8 89999999999999988
|
| >3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* | Back alignment and structure |
|---|
Probab=80.34 E-value=0.87 Score=48.42 Aligned_cols=31 Identities=16% Similarity=0.157 Sum_probs=27.9
Q ss_pred CCceecCCCCCCEEEcCCCcEEEEccCcccc
Q 004157 148 CKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (771)
Q Consensus 148 ~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~ 178 (771)
..++|||+++.||+++.++.+.|+||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4699999999999999888999999998764
|
| >2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} | Back alignment and structure |
|---|
Probab=80.24 E-value=1.1 Score=50.01 Aligned_cols=67 Identities=10% Similarity=-0.077 Sum_probs=38.9
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCe-eEEeeeEEecccCcCCcccEEE
Q 004157 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNI-LAFLHSTEVENIDATSTKITIY 103 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnI-lkv~d~~e~e~~d~~~~~~~iy 103 (771)
.++.|. . .+|+......+..|.++++.... +... ...+|+..++.|...++ .+++..+. + .
T Consensus 115 ~lsgG~tN--~~y~v~~~~~~~~~vLRi~g~~~--~~~i-dR~~E~~vl~~L~~~gl~P~ll~~~~--~----------G 177 (458)
T 2qg7_A 115 IINGGITN--ILIKVKDMSKQAKYLIRLYGPKT--DEII-NREREKKISCILYNKNIAKKIYVFFT--N----------G 177 (458)
T ss_dssp EECC--CE--EEEEEEETTTTEEEEEEEECC-C--CSCS-CHHHHHHHHHHHTTSSSBCCEEEEET--T----------E
T ss_pred EcCCCeEe--EEEEEEECCCCceEEEEECCCCh--hhhc-CHHHHHHHHHHHHhcCCCCCEEEEeC--C----------e
Confidence 444444 4 78888765445788899885421 1111 12578888888874444 45555542 1 2
Q ss_pred EEecCC
Q 004157 104 IVTEPV 109 (771)
Q Consensus 104 IVtE~v 109 (771)
+|+||+
T Consensus 178 ~v~e~I 183 (458)
T 2qg7_A 178 RIEEFM 183 (458)
T ss_dssp EEEECC
T ss_pred EEEEee
Confidence 489998
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 771 | ||||
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 5e-15 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 2e-14 | |
| d1b3ua_ | 588 | a.118.1.2 (A:) Constant regulatory domain of prote | 2e-13 | |
| d1b3ua_ | 588 | a.118.1.2 (A:) Constant regulatory domain of prote | 1e-12 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 2e-13 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 3e-13 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 3e-13 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 5e-13 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 6e-13 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 1e-12 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 3e-12 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 3e-12 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 4e-12 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 4e-12 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 4e-12 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 5e-12 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 6e-12 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 7e-12 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 9e-12 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 1e-11 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 1e-11 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 2e-11 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 2e-11 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 3e-11 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 1e-10 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 2e-10 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 2e-10 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 5e-10 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 6e-10 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 8e-10 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 1e-09 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 3e-09 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 4e-09 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 4e-09 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 6e-09 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 6e-09 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 7e-09 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 1e-08 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 2e-08 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 2e-08 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 5e-08 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 1e-07 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 1e-07 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 2e-07 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 5e-07 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 6e-07 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 9e-07 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 1e-06 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 1e-06 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 2e-06 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 2e-06 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 2e-06 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 2e-06 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 2e-06 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 3e-06 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 3e-06 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 3e-06 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 6e-06 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 6e-06 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 1e-05 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 4e-05 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 4e-05 |
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.9 bits (181), Expect = 5e-15
Identities = 49/265 (18%), Positives = 93/265 (35%), Gaps = 40/265 (15%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
+ K DG + + + + + V LR ++HPNI+ +
Sbjct: 21 QKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDR----- 75
Query: 97 STKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYYAWG-LNQIAKAVSFL----NNDCK 149
T T+YIV E L+ I + E DE + + Q+ A+ +
Sbjct: 76 -TNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHT 134
Query: 150 LVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVEL-AK 208
++H ++ ++V + + KL F + + + A + ++ Q + K
Sbjct: 135 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEK 194
Query: 209 SDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTA---------SIPKSLLPD 259
SD W LGCL+YEL + M + A IP +
Sbjct: 195 SDI-------------WSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDE 241
Query: 260 YQRLLSSM----PSRRLNSSKLIEN 280
+++ M R + +++EN
Sbjct: 242 LNEIITRMLNLKDYHRPSVEEILEN 266
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 72.6 bits (177), Expect = 2e-14
Identities = 38/240 (15%), Positives = 91/240 (37%), Gaps = 15/240 (6%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
F+ + G V++ + N ++G A +K L+ ++H N++ + +
Sbjct: 27 FKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYN 86
Query: 97 STKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVC 156
K +IY+V + + + + + +++ K++H ++
Sbjct: 87 RCKGSIYLVFD-FCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR-NKILHRDMK 144
Query: 157 LSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVG-AQYKPVELAKSDWTAVR 215
++V++T+ KL F + F N +Y V Y+P EL +
Sbjct: 145 AANVLITRDGVLKLADFGLARAFSLAK---NSQPNRYTNRVVTLWYRPPELLLGERDYGP 201
Query: 216 KSPPWSIDSWGLGCLIYELFSGMRL----SKTEELRNTASIPKSLLPDYQRLLSSMPSRR 271
D WG GC++ E+++ + ++ +L + + S+ P+ + +
Sbjct: 202 PI-----DLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYE 256
|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 588 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Constant regulatory domain of protein phosphatase 2a, pr65alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 71.4 bits (173), Expect = 2e-13
Identities = 38/196 (19%), Positives = 67/196 (34%), Gaps = 2/196 (1%)
Query: 294 FMEILNLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALT-ALLK 352
++ L +D + +KL +A L + +LLP L + AL L
Sbjct: 15 LIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGT 74
Query: 353 MGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATG 412
+ + E+ +LP + L + +R ++ + S ++ P V
Sbjct: 75 FTTLVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRAISHEHSPSDLEAHFVPLVKRL 134
Query: 413 FADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIAS 472
R V P++S + L +Y L D+ P +R LG A
Sbjct: 135 AGGDWFTSRTSACGLFSVCYPRVSSA-VKAELRQYFRNLCSDDTPMVRRAAASKLGEFAK 193
Query: 473 HLNEGTRKRVLINAFT 488
L K +I F+
Sbjct: 194 VLELDNVKSEIIPMFS 209
|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 588 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Constant regulatory domain of protein phosphatase 2a, pr65alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 68.7 bits (166), Expect = 1e-12
Identities = 37/201 (18%), Positives = 70/201 (34%), Gaps = 2/201 (0%)
Query: 273 NSSKLIENSEYFQNKLVDTIHFMEILNLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPL 332
N + E Q +E+ + +P LA QL + +KL L
Sbjct: 386 NLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSL 445
Query: 333 LASALEFGSAAAP--ALTALLKMGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHID 390
+ L A A + L K+ E ++P ++ + + R+ L I+
Sbjct: 446 CMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCIN 505
Query: 391 QYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSK 450
+ + + + P V D A +R KS+ + P L T+ + L K
Sbjct: 506 VLSEVCGQDITTKHMLPTVLRMAGDPVANVRFNVAKSLQKIGPILDNSTLQSEVKPILEK 565
Query: 451 LQVDEEPAIRTNTTILLGNIA 471
L D++ ++ L ++
Sbjct: 566 LTQDQDVDVKYFAQEALTVLS 586
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 68.9 bits (168), Expect = 2e-13
Identities = 39/268 (14%), Positives = 86/268 (32%), Gaps = 38/268 (14%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
++ V++ + A D + + + + H N++ F NI
Sbjct: 22 QLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKFYGHRREGNI--- 77
Query: 97 STKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVC 156
Y+ E E + + + +Q+ V +L+ + H ++
Sbjct: 78 -----QYLFLE-YCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH-GIGITHRDIK 130
Query: 157 LSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVG-AQYKPVELAKSDWTAVR 215
++++ + + K+ F + + F NN + G Y EL K R
Sbjct: 131 PENLLLDERDNLKISDFGLATVFRYNNRER-----LLNKMCGTLPYVAPELLKR-----R 180
Query: 216 KSPPWSIDSWGLGCLIYELFSG-----------MRLSKTEELRNTASIPKSLLPDYQRLL 264
+ +D W G ++ + +G S +E + + K + LL
Sbjct: 181 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 240
Query: 265 SSM----PSRRLNSSKLIENSEYFQNKL 288
+ PS R+ + ++ L
Sbjct: 241 HKILVENPSARITIPDIK-KDRWYNKPL 267
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 68.9 bits (168), Expect = 3e-13
Identities = 46/302 (15%), Positives = 98/302 (32%), Gaps = 45/302 (14%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGH-LAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95
+ + V+I +S + Q V+ L+ +RHPN + + E+
Sbjct: 32 YFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH--- 88
Query: 96 TSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNV 155
T ++V E S + ++ A + + +++L + ++H +V
Sbjct: 89 -----TAWLVME-YCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYL-HSHNMIHRDV 141
Query: 156 CLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAW--LVGAQYKPVELAKSDWTA 213
++++++ KL F + + G A ++ + K D
Sbjct: 142 KAGNILLSEPGLVKLGDFG-SASIMAPANSFVGTPYWMAPEVILAMDEGQYD-GKVDV-- 197
Query: 214 VRKSPPWSIDSWGLGCLIYELFSGMR----LSKTEELRNTAS------IPKSLLPDYQRL 263
W LG EL ++ L + A ++
Sbjct: 198 -----------WSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNF 246
Query: 264 LSSM----PSRRLNSSKLIENSEYFQNKLVDTIHFMEILNLKDSVE--KDTFFRKLPNLA 317
+ S P R S L++ + + T+ I KD+V + +RK+ +
Sbjct: 247 VDSCLQKIPQDRPTSEVLLK-HRFVLRERPPTVIMDLIQRTKDAVRELDNLQYRKMKKIL 305
Query: 318 EQ 319
Q
Sbjct: 306 FQ 307
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 68.2 bits (166), Expect = 3e-13
Identities = 44/264 (16%), Positives = 85/264 (32%), Gaps = 32/264 (12%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKR----LRTVRHPNILAFLHSTEVEN 92
+ G D PV+I + D V L+ V S +
Sbjct: 21 YSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG------FSGVIRL 74
Query: 93 IDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVH 152
+D + ++ E P+ + + G+ ++E Q+ +AV +N C ++H
Sbjct: 75 LDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN-CGVLH 133
Query: 153 GNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVG-AQYKPVELAKSDW 211
++ ++++ + Y G Y P E W
Sbjct: 134 RDIKDENILIDLNRGELKLIDFGSGALLKDT--------VYTDFDGTRVYSPPE-----W 180
Query: 212 TAVRKSPPWSIDSWGLGCLIYELFSGMRL--SKTEELRNTASIPKSLLPDYQRLLSSM-- 267
+ S W LG L+Y++ G E +R + + + Q L+
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLA 240
Query: 268 --PSRRLNSSKLIENSEYFQNKLV 289
PS R ++ N + Q+ L+
Sbjct: 241 LRPSDRPTFEEIQ-NHPWMQDVLL 263
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 68.1 bits (166), Expect = 5e-13
Identities = 43/265 (16%), Positives = 88/265 (33%), Gaps = 34/265 (12%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
++ +K+ + I + ++ L + L + HPNI+ L + EN
Sbjct: 29 YKAQNKETSVLAAAKVIDTKSEEE--LEDYMVEIDILASCDHPNIVKLLDAFYYEN---- 82
Query: 97 STKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVC 156
++I+ E + L LE + Q A+++L+ D K++H ++
Sbjct: 83 ----NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH-DNKIIHRDLK 137
Query: 157 LSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRK 216
+++ T D KL F V ++ + + + W P +
Sbjct: 138 AGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYW-----MAPEVVMCETSKDRPY 192
Query: 217 SPPWSIDSWGLGCLIYELFSGMR----LSKTEELRNTA-------SIPKSLLPDYQRLLS 265
D W LG + E+ L+ L A + P +++ L
Sbjct: 193 DY--KADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLK 250
Query: 266 SM----PSRRLNSSKLIENSEYFQN 286
R +S+L+ +
Sbjct: 251 KCLEKNVDARWTTSQLL-QHPFVTV 274
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 68.1 bits (166), Expect = 6e-13
Identities = 37/265 (13%), Positives = 93/265 (35%), Gaps = 41/265 (15%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
+ G V+I ++ N + +R ++PNI+ +L S V +
Sbjct: 37 YTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENKNPNIVNYLDSYLVGD---- 90
Query: 97 STKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVC 156
+++V E + S + ++ E + A + +A+ FL+ +++H ++
Sbjct: 91 ----ELWVVMEYLAGGS--LTDVVTETCMDEGQIAAVCRECLQALEFLH-SNQVIHRDIK 143
Query: 157 LSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRK 216
++++ KL F ++ + + W+ P + + +
Sbjct: 144 SDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWM-----APEVVTRKAYGP--- 195
Query: 217 SPPWSIDSWGLGCLIYELFSGMRL----SKTEELRN-------TASIPKSLLPDYQRLLS 265
+D W LG + E+ G + L P+ L ++ L+
Sbjct: 196 ----KVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLN 251
Query: 266 SM----PSRRLNSSKLIENSEYFQN 286
+R ++ +L+ ++ +
Sbjct: 252 RCLDMDVEKRGSAKELL-QHQFLKI 275
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 67.8 bits (165), Expect = 1e-12
Identities = 35/305 (11%), Positives = 92/305 (30%), Gaps = 42/305 (13%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
+ K G I+ D + +N + + + HP ++ + E +
Sbjct: 46 HRCVEKATGRVFVAKFINTPYPLDKY--TVKNEISIMNQLHHPKLINLHDAFEDKY---- 99
Query: 97 STKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWG-LNQIAKAVSFLNNDCKLVHGNV 155
+ ++ E + E + E + E + Q + + ++ + +VH ++
Sbjct: 100 ----EMVLILE-FLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH-EHSIVHLDI 153
Query: 156 CLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVR 215
+++ + + +F + +++ P + +
Sbjct: 154 KPENIMCETKKASSV----KIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYT 209
Query: 216 KSPPWSIDSWGLGCLIYELFSG------------MRLSKTEELRNTASIPKSLLPDYQRL 263
D W +G L Y L SG ++ K + S+ P+ +
Sbjct: 210 -------DMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDF 262
Query: 264 LSSM----PSRRLNSSKLIENSEYFQNKLVDTIHFMEILNLKDSVEK-DTFFRKLPNLAE 318
+ ++ P +RL +E + + + + +K + P
Sbjct: 263 IKNLLQKEPRKRLTVHDALE-HPWLKGDHSNLTSRIPSSRYNKIRQKIKEKYADWPAPQP 321
Query: 319 QLPRQ 323
+ R
Sbjct: 322 AIGRI 326
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.4 bits (159), Expect = 3e-12
Identities = 46/263 (17%), Positives = 88/263 (33%), Gaps = 48/263 (18%)
Query: 42 KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKIT 101
G+ V++ I D A + +RH N++ L K
Sbjct: 27 DYRGNKVAVKCIK----NDATAQAFLAEASVMTQLRHSNLVQLLGVI-------VEEKGG 75
Query: 102 IYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSS 159
+YIVTE + L + ++ G D + L + +A+ +L VH ++ +
Sbjct: 76 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL-DVCEAMEYLE-GNNFVHRDLAARN 133
Query: 160 VVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYA--WLVGAQYKPVELAKSDWTAVRKS 217
V+V++ K+ F + E + P+ A L ++ KSD
Sbjct: 134 VLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFST----KSDV------ 183
Query: 218 PPWSIDSWGLGCLIYELFSGMRLSKTEELRNTA----------SIPKSLLPDYQRLLSSM 267
W G L++E++S R+ P P ++ +
Sbjct: 184 -------WSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNC 236
Query: 268 ----PSRRLNSSKLIENSEYFQN 286
+ R + +L E E+ +
Sbjct: 237 WHLDAAMRPSFLQLREQLEHIKT 259
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.4 bits (159), Expect = 3e-12
Identities = 43/269 (15%), Positives = 91/269 (33%), Gaps = 44/269 (16%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
++G + V+ + + + L+ ++HPNI+ F S E
Sbjct: 26 YKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWE----STV 81
Query: 97 STKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFL-NNDCKLVHG 153
K I +VTE L +K + + + QI K + FL ++H
Sbjct: 82 KGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCR---QILKGLQFLHTRTPPIIHR 138
Query: 154 NVCLSSVVVT-QTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVG-AQYKPVELAKSDW 211
++ ++ +T T K+ L+ + A ++G ++ E+ + +
Sbjct: 139 DLKCDNIFITGPTGSVKIGDLG-LATLKRASFAKA--------VIGTPEFMAPEMYEEKY 189
Query: 212 TAVRKSPPWSIDSWGLGCLIYELFSGMR-----------LSKTEELRNTASIPKSLLPDY 260
S+D + G + E+ + + AS K +P+
Sbjct: 190 DE-------SVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEV 242
Query: 261 QRLLSSM----PSRRLNSSKLIENSEYFQ 285
+ ++ R + L+ N +FQ
Sbjct: 243 KEIIEGCIRQNKDERYSIKDLL-NHAFFQ 270
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 65.4 bits (159), Expect = 4e-12
Identities = 41/271 (15%), Positives = 89/271 (32%), Gaps = 48/271 (17%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
K V+I I+ A +G + N + L ++HPNI+A E
Sbjct: 26 ILAEDKRTQKLVAIKCIA-KKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGG---- 80
Query: 97 STKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGN 154
+Y++ + L ++I E G + + Q+ AV +L+ D +VH +
Sbjct: 81 ----HLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF---QVLDAVKYLH-DLGIVHRD 132
Query: 155 VCLSSVVVTQTLD---WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDW 211
+ +++ + + F LS+ + + ++ P LA+ +
Sbjct: 133 LKPENLLYYSLDEDSKIMISDFG-LSKMEDPGSVLSTACGTPGYVA-----PEVLAQKPY 186
Query: 212 TAVRKSPPWSIDSWGLGCLIYELFSG------------MRLSKTEELRNTASIPKSLLPD 259
+ ++D W +G + Y L G E + +
Sbjct: 187 SK-------AVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDS 239
Query: 260 YQRLLSSM----PSRRLNSSKLIENSEYFQN 286
+ + + P +R + + +
Sbjct: 240 AKDFIRHLMEKDPEKRFTCEQAL-QHPWIAG 269
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 65.1 bits (158), Expect = 4e-12
Identities = 35/271 (12%), Positives = 87/271 (32%), Gaps = 38/271 (14%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFL--HSTEVENID 94
+ K ++ I T + + + +IL + H ++ D
Sbjct: 20 RRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATL--KEVDILRKVSGHPNIIQLKD 77
Query: 95 ATSTKITIYIVTE--PVMPLSEKIKELG-LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLV 151
T ++V + L + + E L + + + + + + L+ +V
Sbjct: 78 TYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKI----MRALLEVICALH-KLNIV 132
Query: 152 HGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVG-AQYKPVELAKSD 210
H ++ ++++ ++ KL F + D + + G Y E+ +
Sbjct: 133 HRDLKPENILLDDDMNIKLTDFGFSCQLDPGE--------KLREVCGTPSYLAPEIIECS 184
Query: 211 WTAVRKSPPWSIDSWGLGCLIYELFSG------------MRLSKTEELRNTASIPKSLLP 258
+D W G ++Y L +G +R+ + + +
Sbjct: 185 MNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSD 244
Query: 259 DYQRLLSSM----PSRRLNSSKLIENSEYFQ 285
+ L+S P +R + + + +FQ
Sbjct: 245 TVKDLVSRFLVVQPQKRYTAEEAL-AHPFFQ 274
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.5 bits (159), Expect = 4e-12
Identities = 47/276 (17%), Positives = 85/276 (30%), Gaps = 37/276 (13%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
F+ + K G ++ I + ++ L P I+ F + +
Sbjct: 23 FKVSHKPSGLVMARKLIH-LEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG---- 77
Query: 97 STKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGN 154
I I E + L + +K+ G Q + + K +++L K++H +
Sbjct: 78 ----EISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI---AVIKGLTYLREKHKIMHRD 130
Query: 155 VCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYA---WLVGAQYKPVELAKSDW 211
V S+++V + KL F V + + + Y L G Y +SD
Sbjct: 131 VKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSV----QSDI 186
Query: 212 TAVRKSPPWSIDSWGLGCLIYELFSGMRL---SKTEELRNTASIPKSLLPDYQRLLSSMP 268
W +G + E+ G +EL P
Sbjct: 187 -------------WSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTP 233
Query: 269 SRRLNSSKLIENSEYFQNKLVDTIHFMEILNLKDSV 304
R L+S + +L+D I L V
Sbjct: 234 GRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGV 269
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.6 bits (157), Expect = 5e-12
Identities = 45/263 (17%), Positives = 94/263 (35%), Gaps = 40/263 (15%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95
+ K +++ + + G R V+ +RHPNIL
Sbjct: 23 YLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT--- 79
Query: 96 TSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNV 155
+Y++ E PL +EL ++ A + ++A A+S+ + +++H ++
Sbjct: 80 -----RVYLILEY-APLGTVYRELQKLSKFDEQRTATYITELANALSYCH-SKRVIHRDI 132
Query: 156 CLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVG-AQYKPVELAKSDWTAV 214
++++ + K+ F + + P + L G Y P E+ +
Sbjct: 133 KPENLLLGSAGELKIADFGW---------SVHAPSSRRTTLCGTLDYLPPEMIE------ 177
Query: 215 RKSPPWSIDSWGLGCLIYELFSGMRLSKTEE--------LRNTASIPKSLLPDYQRLLSS 266
+ +D W LG L YE G + R + P + + L+S
Sbjct: 178 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR 237
Query: 267 M----PSRRLNSSKLIENSEYFQ 285
+ PS+R +++E +
Sbjct: 238 LLKHNPSQRPMLREVLE-HPWIT 259
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.1 bits (158), Expect = 6e-12
Identities = 43/266 (16%), Positives = 78/266 (29%), Gaps = 40/266 (15%)
Query: 37 FQGTSKDDGSPVSI--FSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94
F K +I D HP +
Sbjct: 19 FLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFL--------THMFC 70
Query: 95 ATSTKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVH 152
TK ++ V E + L I+ R +YA +I + FL+ +V+
Sbjct: 71 TFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAA---EIILGLQFLH-SKGIVY 126
Query: 153 GNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWT 212
++ L ++++ + K+ F + E + N + P L +
Sbjct: 127 RDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDY-----IAPEILLGQKYN 181
Query: 213 AVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTA--------SIPKSLLPDYQRLL 264
S+D W G L+YE+ G ++ P+ L + + LL
Sbjct: 182 H-------SVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLL 234
Query: 265 SSM----PSRRLNSSKLIENSEYFQN 286
+ P +RL I F+
Sbjct: 235 VKLFVREPEKRLGVRGDIRQHPLFRE 260
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.1 bits (158), Expect = 7e-12
Identities = 43/311 (13%), Positives = 95/311 (30%), Gaps = 45/311 (14%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
+ + + + L RH NIL S E
Sbjct: 22 HRCVETSSKKTYMAKFVKVKGTDQ---VLVKKEISILNIARHRNILHLHESFESME---- 74
Query: 97 STKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGN 154
+ ++ E + + E+I E ++R+ ++Q+ +A+ FL+ + H +
Sbjct: 75 ----ELVMIFEFISGLDIFERINTSAFELNERE--IVSYVHQVCEALQFLH-SHNIGHFD 127
Query: 155 VCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAV 214
+ +++ + + F + G + + Y P +
Sbjct: 128 IRPENIIYQTRRSSTIKIIE----FGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVST- 182
Query: 215 RKSPPWSIDSWGLGCLIYELFSG------------MRLSKTEELRNTASIPKSLLPDYQR 262
+ D W LG L+Y L SG + E K + +
Sbjct: 183 ------ATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMD 236
Query: 263 LLSSM----PSRRLNSSKLIENSEYFQNKLVDTIHFMEILNLKDSVEKDTFFRKLPNLAE 318
+ + R+ +S+ +++ + + K+ + + I LK T +K N+
Sbjct: 237 FVDRLLVKERKSRMTASEALQH-PWLKQKI-ERVSTKVIRTLKHRRYYHTLIKKDLNMVV 294
Query: 319 QLPRQIVLKKL 329
R +
Sbjct: 295 SAARISCGGAI 305
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.3 bits (156), Expect = 9e-12
Identities = 36/278 (12%), Positives = 95/278 (34%), Gaps = 33/278 (11%)
Query: 37 FQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95
+I + + ++ + + + HP + + + +
Sbjct: 25 VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE--- 81
Query: 96 TSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNV 155
+Y E +K + GS + + +I A+ +L+ ++H ++
Sbjct: 82 -----KLYFGLS-YAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG-IIHRDL 134
Query: 156 CLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVR 215
++++ + + ++ F ++ A +++ AQY EL
Sbjct: 135 KPENILLNEDMHIQITDFGTAKVLSPESKQAR----ANSFVGTAQYVSPELLTE------ 184
Query: 216 KSPPWSIDSWGLGCLIYELFSGMRLSKTEE--------LRNTASIPKSLLPDYQRLLSSM 267
KS S D W LGC+IY+L +G+ + ++ P+ P + L+ +
Sbjct: 185 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKL 244
Query: 268 ----PSRRLNSSKLIENSEYFQNKLVDTIHFMEILNLK 301
++RL ++ + +++ + +
Sbjct: 245 LVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQT 282
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.1 bits (155), Expect = 1e-11
Identities = 26/213 (12%), Positives = 66/213 (30%), Gaps = 22/213 (10%)
Query: 42 KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKIT 101
K G V++ S + A + + +RH NIL F+ + +N T
Sbjct: 23 KWRGEEVAVKIFSSREERSWFREAE---IYQTVMLRHENILGFIAADNKDN----GTWTQ 75
Query: 102 IYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDC-------KLVH 152
+++V++ L + + + + A ++ L+ + + H
Sbjct: 76 LWLVSDYHEHGSLFDYLNRYTVTVEGMIKLAL----STASGLAHLHMEIVGTQGKPAIAH 131
Query: 153 GNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWT 212
++ +++V + + + D + + Y E+
Sbjct: 132 RDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR--YMAPEVLDDSIN 189
Query: 213 AVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE 245
D + +G + +E+ + E
Sbjct: 190 MKHFESFKRADIYAMGLVFWEIARRCSIGGIHE 222
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 64.8 bits (157), Expect = 1e-11
Identities = 34/274 (12%), Positives = 94/274 (34%), Gaps = 48/274 (17%)
Query: 37 FQGTSKDDGSPVSIFSIS----GTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92
+ D G ++ + + R + + T P I+ ++ +
Sbjct: 21 YGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD 80
Query: 93 IDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVH 152
+ + + +M + L G + + +I + ++ + +V+
Sbjct: 81 --------KLSFILD-LMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH-NRFVVY 130
Query: 153 GNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQY-AWLVGAQYKPVELAKSDW 211
++ +++++ + ++ + +F A+ Y A V + + + +DW
Sbjct: 131 RDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYD-SSADW 189
Query: 212 TAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTASI-----------PKSLLPDY 260
+ LGC++++L G + + ++ I P S P+
Sbjct: 190 -------------FSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPEL 236
Query: 261 QRLLSSM----PSRRLNSSKL----IENSEYFQN 286
+ LL + +RRL ++ S +F++
Sbjct: 237 RSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS 270
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 63.3 bits (153), Expect = 2e-11
Identities = 48/298 (16%), Positives = 103/298 (34%), Gaps = 34/298 (11%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
++ +K G V++ I +G + A + L+ + HPNI V+ +D
Sbjct: 19 YKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI--------VKLLDVI 70
Query: 97 STKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVC 156
T+ +Y+V E + +K + L Q+ + ++F ++ ++H ++
Sbjct: 71 HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-VLHRDLK 129
Query: 157 LSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRK 216
++++ KL F + F ++ + P L K
Sbjct: 130 PQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY-----RAPEILLGC------K 178
Query: 217 SPPWSIDSWGLGCLIYELFSGMRL----SKTEELRNTASIPKSLLPDYQRLLSSMPSRRL 272
++D W LGC+ E+ + L S+ ++L + ++SMP +
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 273 NSSKLIEN--SEYFQNKLVDTIHFMEILNLKDSVE--------KDTFFRKLPNLAEQL 320
+ K S+ D + + D + FF+ + L
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 296
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 63.9 bits (155), Expect = 2e-11
Identities = 42/266 (15%), Positives = 95/266 (35%), Gaps = 41/266 (15%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
+ T + G+ + + + D R ++ + +RHP ++ + E +N
Sbjct: 43 HRVTERATGNNFAAKFVMTPHESD--KETVRKEIQTMSVLRHPTLVNLHDAFEDDN---- 96
Query: 97 STKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWG-LNQIAKAVSFLNNDCKLVHGNV 155
+ ++ E M E +++ E ++ E A + Q+ K + ++ + VH ++
Sbjct: 97 ----EMVMIYE-FMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH-ENNYVHLDL 150
Query: 156 CLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVR 215
+++ T +L L +F G + A++ E+A+
Sbjct: 151 KPENIMFTTKRSNEL----KLIDF-GLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYY 205
Query: 216 KSPPWSIDSWGLGCLIYELFSG------------MRLSKTEELRNTASIPKSLLPDYQRL 263
D W +G L Y L SG +R K+ + S + D +
Sbjct: 206 ------TDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDF 259
Query: 264 LSSM----PSRRLNSSKLIENSEYFQ 285
+ + P+ R+ + +E +
Sbjct: 260 IRKLLLADPNTRMTIHQALE-HPWLT 284
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.7 bits (151), Expect = 3e-11
Identities = 35/203 (17%), Positives = 77/203 (37%), Gaps = 21/203 (10%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
F+ +++ V++ + + +G ++A + L+ ++H NI V D
Sbjct: 19 FKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI--------VRLHDVL 70
Query: 97 STKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVC 156
+ + +V E +K + G E L Q+ K + F ++ ++H ++
Sbjct: 71 HSDKKLTLVFEFCDQDLKKYFD-SCNGDLDPEIVKSFLFQLLKGLGFCHS-RNVLHRDLK 128
Query: 157 LSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRK 216
++++ + + KL F + F + ++ + P L +
Sbjct: 129 PQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWY-----RPPDVLFGAKLY---- 179
Query: 217 SPPWSIDSWGLGCLIYELFSGMR 239
SID W GC+ EL + R
Sbjct: 180 --STSIDMWSAGCIFAELANAGR 200
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 60.5 bits (146), Expect = 1e-10
Identities = 44/260 (16%), Positives = 90/260 (34%), Gaps = 34/260 (13%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95
V++ + A+D R + + HP I+A + E E
Sbjct: 24 HLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAET--- 80
Query: 96 TSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNV 155
YIV E + + EG + + +A++F + ++H +V
Sbjct: 81 -PAGPLPYIVME-YVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH-QNGIIHRDV 137
Query: 156 CLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVG-AQYKPVELAKSDWTAV 214
++++++ T K+ F + + + Q A ++G AQY E A+
Sbjct: 138 KPANIMISATNAVKVMDFGIARAIADSGN----SVTQTAAVIGTAQYLSPEQAR------ 187
Query: 215 RKSPPWSIDSWGLGCLIYELFSG------------MRLSKTEELRNTASIPKSLLPDYQR 262
S D + LGC++YE+ +G E+ ++ + L D
Sbjct: 188 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDA 247
Query: 263 LLSSM----PSRRLNSSKLI 278
++ P R ++ +
Sbjct: 248 VVLKALAKNPENRYQTAAEM 267
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.0 bits (145), Expect = 2e-10
Identities = 48/279 (17%), Positives = 99/279 (35%), Gaps = 56/279 (20%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
++G D V++ ++ T L A +N V LR RH NIL F+
Sbjct: 25 YKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM---------GY 72
Query: 97 STKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGN 154
ST + IVT+ L + + + Q A+ + +L+ ++H +
Sbjct: 73 STAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI--ARQTAQGMDYLHAKS-IIHRD 129
Query: 155 VCLSSVVVTQTLDWKLHAF---DVLSEFDGNNEAAN--GPMLQYAW--LVGAQYKPVELA 207
+ +++ + + L K+ F V S + G+++ G +L A + P
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS-F 188
Query: 208 KSDWTAVRKSPPWSIDSWGLGCLIYELFSG--------------MRLSKTEELRNTASIP 253
+SD + G ++YEL +G + + + + +
Sbjct: 189 QSDV-------------YAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVR 235
Query: 254 KSLLPDYQRLLSSM----PSRRLNSSKLIENSEYFQNKL 288
+ +RL++ R +++ + E L
Sbjct: 236 SNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 274
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.3 bits (145), Expect = 2e-10
Identities = 45/294 (15%), Positives = 101/294 (34%), Gaps = 36/294 (12%)
Query: 42 KDDGSPVSIFSISGTNAQDGHLAAARNGV---KRLRTVRHPNILAFLHSTEVENIDATST 98
K+ G V++ + ++G + V + L T HPN++ +V + T
Sbjct: 30 KNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLF---DVCTVSRTDR 86
Query: 99 KITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLS 158
+ + +V E V + E E + Q+ + + FL+ ++VH ++
Sbjct: 87 ETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH-SHRVVHRDLKPQ 145
Query: 159 SVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYK--PVELAKSDWTAVRK 216
+++VT + KL F + + + +V + P L +S +
Sbjct: 146 NILVTSSGQIKLADFGLARIYS--------FQMALTSVVVTLWYRAPEVLLQSSYAT--- 194
Query: 217 SPPWSIDSWGLGCLIYELFSGMRL----SKTEELRNTASIPKSLLPDYQRLLSSMPSRRL 272
+D W +GC+ E+F L S ++L + + ++P +
Sbjct: 195 ----PVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAF 250
Query: 273 NSSKLIENSEYFQNKLVDTIHFMEILNLKDSVE--------KDTFFRKLPNLAE 318
+S ++ + + + + +F+ L E
Sbjct: 251 HSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERCKE 304
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.8 bits (144), Expect = 5e-10
Identities = 42/303 (13%), Positives = 110/303 (36%), Gaps = 36/303 (11%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
G+ V+I + + A ++ L+ +RH N++ L + +
Sbjct: 35 CSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPD--ETL 92
Query: 97 STKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVC 156
Y+V + K+ + G R ++ + Q+ K + ++ + ++H ++
Sbjct: 93 DDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVY---QMLKGLRYI-HAAGIIHRDLK 148
Query: 157 LSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRK 216
++ V + + K+ F + + D ++V Y+ E+ +
Sbjct: 149 PGNLAVNEDCELKILDFGLARQADSE---------MTGYVVTRWYRAPEVILN-----WM 194
Query: 217 SPPWSIDSWGLGCLIYELFSGMRLSKTEE--------LRNTASIPKSLLPDYQRLLSSMP 268
++D W +GC++ E+ +G L K + ++ T + P + Q +
Sbjct: 195 RYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNY 254
Query: 269 SRRLNSSKLIENSEYFQNKLVDTIHFMEILNLKDSVE--------KDTFFRKLPNLAEQL 320
+ L + + + N ++ +E + + D+ + +F L + ++
Sbjct: 255 MKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTEDEP 314
Query: 321 PRQ 323
Q
Sbjct: 315 QVQ 317
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.0 bits (142), Expect = 6e-10
Identities = 46/275 (16%), Positives = 94/275 (34%), Gaps = 48/275 (17%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKR----LRTVRHPNILAFLHSTEVEN 92
+ K G + I + +R ++R L+ ++HPN++ E +
Sbjct: 27 KKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT 86
Query: 93 IDATSTKITIYIVTEPV---MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCK 149
+ ++ E V ++ L + E+ LN + S
Sbjct: 87 --------DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFD 138
Query: 150 LVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVG-AQYKPVELAK 208
L N+ L V + K+ F + + D NE + + G ++ E+
Sbjct: 139 LKPENIMLLDRNVPK-PRIKIIDFGLAHKIDFGNE--------FKNIFGTPEFVAPEIVN 189
Query: 209 SDWTAVRKSPPWSIDSWGLGCLIYELFSG----MRLSKTEELRNTASIPKSLLPDY---- 260
+ + D W +G + Y L SG + +K E L N +++ +Y
Sbjct: 190 YEPLGLE------ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 243
Query: 261 --------QRLLSSMPSRRLNSSKLIENSEYFQNK 287
+RLL P +R+ +++ + + K
Sbjct: 244 SALAKDFIRRLLVKDPKKRMTIQDSLQH-PWIKPK 277
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.2 bits (140), Expect = 8e-10
Identities = 36/268 (13%), Positives = 81/268 (30%), Gaps = 51/268 (19%)
Query: 42 KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKIT 101
K V++ + ++ + +P I+ + E E+
Sbjct: 31 KKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAES--------- 81
Query: 102 IYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVV 161
+V E + L K L +D+ ++Q++ + +L VH ++ +V+
Sbjct: 82 WMLVME-MAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE-SNFVHRDLAARNVL 139
Query: 162 VTQTLDWKLHAFDVLSEFDGNNEAAN------GPMLQYA--WLVGAQYKPVELAKSDWTA 213
+ K+ F + + P+ YA + ++ KSD
Sbjct: 140 LVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS----KSDV-- 193
Query: 214 VRKSPPWSIDSWGLGCLIYEL-------FSGMRLSKTEEL---RNTASIPKSLLPDYQRL 263
W G L++E + GM+ S+ + P + L
Sbjct: 194 -----------WSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDL 242
Query: 264 LSSM----PSRRLNSSKLIEN-SEYFQN 286
++ R + + Y+ +
Sbjct: 243 MNLCWTYDVENRPGFAAVELRLRNYYYD 270
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.9 bits (139), Expect = 1e-09
Identities = 52/304 (17%), Positives = 103/304 (33%), Gaps = 39/304 (12%)
Query: 37 FQGTSKDDGSPVSIFSIS---GTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93
++ K+ V+I I + A+DG A +K L+ + HPNI+ L + ++
Sbjct: 15 YKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS- 73
Query: 94 DATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHG 153
I +V + + E I + A+ L + + +L+ ++H
Sbjct: 74 -------NISLVFDFMETDLEVIIKDNSLVLTPSHIKAYML-MTLQGLEYLHQHW-ILHR 124
Query: 154 NVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTA 213
++ +++++ + KL F + F + +V Y+ EL
Sbjct: 125 DLKPNNLLLDENGVLKLADFGLAKSFG------SPNRAYTHQVVTRWYRAPELLFGARMY 178
Query: 214 VRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE--------LRNTASIPKSLLPDYQRLLS 265
D W +GC++ EL + + + + PD L
Sbjct: 179 GVGV-----DMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPD 233
Query: 266 SMPSRRLNSSKLIENSEYFQNKLVDTIHFMEILNLKD--SVE---KDTFFRKLPNLAE-- 318
+ + L + L+D I + + N + K +F P
Sbjct: 234 YVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGC 293
Query: 319 QLPR 322
QLPR
Sbjct: 294 QLPR 297
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.6 bits (136), Expect = 3e-09
Identities = 40/253 (15%), Positives = 84/253 (33%), Gaps = 41/253 (16%)
Query: 43 DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITI 102
+ + V++ S+ + ++ ++H ++ E I
Sbjct: 35 NGHTKVAVKSLKQGSMSPDAF---LAEANLMKQLQHQRLVRLYAVVTQEP---------I 82
Query: 103 YIVTEPVMPLSEKIKELGLEGSQRDEYYAWGL-NQIAKAVSFLNNDCKLVHGNVCLSSVV 161
YI+TE + S G + + QIA+ ++F+ + +H ++ ++++
Sbjct: 83 YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI-EERNYIHRDLRAANIL 141
Query: 162 VTQTLDWKLHAFDVLSEFDGNN-EAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPW 220
V+ TL K+ F + + N A G W P + +T
Sbjct: 142 VSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW-----TAPEAINYGTFTI------- 189
Query: 221 SIDSWGLGCLIYELFSGMRL-----SKTEELRNTASIPKSLLPDY---------QRLLSS 266
D W G L+ E+ + R+ + E ++N + + PD +
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKE 249
Query: 267 MPSRRLNSSKLIE 279
P R L
Sbjct: 250 RPEDRPTFDYLRS 262
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.3 bits (135), Expect = 4e-09
Identities = 37/267 (13%), Positives = 90/267 (33%), Gaps = 39/267 (14%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95
K G ++ + +A + L+ RHP + A ++ + +
Sbjct: 22 ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD--- 78
Query: 96 TSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNV 155
++ + L + + +R +Y +I A+ + + +V+ ++
Sbjct: 79 ---RLCFVMEYANGGELFFHLSRERVFTEERARFYGA---EIVSALEY-LHSRDVVYRDI 131
Query: 156 CLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVR 215
L ++++ + K+ F + E + +L +
Sbjct: 132 KLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYL------------APEVLED 179
Query: 216 KSPPWSIDSWGLGCLIYELFSGMRLSKTEE--------LRNTASIPKSLLPDYQRLLSSM 267
++D WGLG ++YE+ G ++ L P++L P+ + LL+ +
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGL 239
Query: 268 ----PSRRLNSSKL----IENSEYFQN 286
P +RL + +F +
Sbjct: 240 LKKDPKQRLGGGPSDAKEVMEHRFFLS 266
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.4 bits (135), Expect = 4e-09
Identities = 35/205 (17%), Positives = 76/205 (37%), Gaps = 18/205 (8%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
+ V+I IS Q + +K L RH NI+ I+
Sbjct: 25 CSAYDNVNKVRVAIKKISPFEHQ-TYCQRTLREIKILLRFRHENIIGINDIIRAPTIE-- 81
Query: 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNV 155
+Y+VT + L + +K L + I + + ++ + ++H ++
Sbjct: 82 -QMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQ----ILRGLKYI-HSANVLHRDL 135
Query: 156 CLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVR 215
S++++ T D K+ F + D ++ + ++ Y+ E+ + +
Sbjct: 136 KPSNLLLNTTCDLKICDFGLARVADPDH---DHTGFLTEYVATRWYRAPEIMLNSKGYTK 192
Query: 216 KSPPWSIDSWGLGCLIYELFSGMRL 240
ID W +GC++ E+ S +
Sbjct: 193 S-----IDIWSVGCILAEMLSNRPI 212
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.3 bits (135), Expect = 6e-09
Identities = 44/292 (15%), Positives = 98/292 (33%), Gaps = 48/292 (16%)
Query: 73 LRTVRHPNILAFLHSTEVENIDATSTKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYY 130
R + P+I+ + E + + + + IV E L +I++ G + E
Sbjct: 59 WRASQCPHIVRIVDVYE----NLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 114
Query: 131 AWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPM 190
+ I +A+ +L+ + H +V +++ T + +A L++F E +
Sbjct: 115 EI-MKSIGEAIQYLH-SINIAHRDVKPENLLYT---SKRPNAILKLTDFGFAKETTSHNS 169
Query: 191 LQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG------------- 237
L P L + S D W LG ++Y L G
Sbjct: 170 LTTPCYTPYYVAPEVLGPEKYDK-------SCDMWSLGVIMYILLCGYPPFYSNHGLAIS 222
Query: 238 ---MRLSKTEELRNTASIPKSLLPDYQRLLSSM----PSRRLNSSKLIENSEYFQNKL-- 288
+ + + + + L+ ++ P++R+ ++ + N +
Sbjct: 223 PGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFM-NHPWIMQSTKV 281
Query: 289 ----VDTIHFMEILNLKDSVEKDTFFRKLPNL---AEQLPRQIVLKKLLPLL 333
+ T ++ + K+ L + EQ+ + + PLL
Sbjct: 282 PQTPLHTSRVLKEDKERWEDVKEEMTSALATMRVDYEQIKIKKIEDASNPLL 333
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.3 bits (135), Expect = 6e-09
Identities = 49/332 (14%), Positives = 114/332 (34%), Gaps = 42/332 (12%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
+Q D G V+I + ++ +R + H NI+ + +
Sbjct: 37 YQAKLCDSGELVAIKKVLQDKRF------KNRELQIMRKLDHCNIVRLRYF--FYSSGEK 88
Query: 97 STKITIYIVTEPVMPLSEKIKELGLEGSQR-DEYYAWG-LNQIAKAVSFLNNDCKLVHGN 154
++ + +V + V ++ Q Y + Q+ +++++++ + H +
Sbjct: 89 KDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-SFGICHRD 147
Query: 155 VCLSSVVVTQ-TLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTA 213
+ ++++ T KL F + P + Y + + +D+T+
Sbjct: 148 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-----PNVSYICSRYYRAPELIFGATDYTS 202
Query: 214 VRKSPPWSIDSWGLGCLIYELFSGMRL----SKTEELRNTASIPKSLLPDYQR-LLSSMP 268
SID W GC++ EL G + S ++L + + + R + +
Sbjct: 203 -------SIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT 255
Query: 269 SRRLNSSKLIENSEYFQNKL-VDTIHFMEILNLKDSVE--------KDTFFRKLPNLAEQ 319
+ K ++ F+ + + I L +FF +L + +
Sbjct: 256 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVK 315
Query: 320 LPRQIVLKKLLPLLASALEFGSAAAPALTALL 351
LP + P L + ++ P L +L
Sbjct: 316 LPN----GRDTPALFNFTTQELSSNPPLATIL 343
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 56.2 bits (134), Expect = 7e-09
Identities = 53/330 (16%), Positives = 107/330 (32%), Gaps = 39/330 (11%)
Query: 20 PYNIGDPYPSA---------WGSWSH-FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNG 69
P G+PY A WG +S + + + V++ + + AA +
Sbjct: 3 PAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIV---RGDKVYTEAAEDE 59
Query: 70 VKRLRTVRHPNILAFLHSTEVENI--------DATSTKITIYIVTEPVMPLSEKIKELGL 121
+K L+ V + S +I + + +V E + + +
Sbjct: 60 IKLLQRVNDADNTK-EDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYE 118
Query: 122 EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181
Y Q+ + +++ C ++H ++ +V++ D + + G
Sbjct: 119 HRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIV-DSPENLIQIKIADLG 177
Query: 182 NNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLS 241
N + +Y+ E+ D W CLI+EL +G L
Sbjct: 178 NACWYDEHYTNSIQ--TREYRSPEVLL------GAPWGCGADIWSTACLIFELITGDFLF 229
Query: 242 KTEELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKLVDTIHFMEILNLK 301
+ +E + + LL +PS L + K + L+ I ++ L+
Sbjct: 230 EPDEGHSYTK-DDDHIAQIIELLGELPSYLLRNGKYTRTF-FNSRGLLRNISKLKFWPLE 287
Query: 302 DSV-EKDTFFRKLPNLAEQLPRQIVLKKLL 330
D + EK F + L +L
Sbjct: 288 DVLTEKYKFSKDEAKEISDF-----LSPML 312
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 54.3 bits (130), Expect = 1e-08
Identities = 45/285 (15%), Positives = 97/285 (34%), Gaps = 46/285 (16%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
++G K V++ ++ + ++ ++HPN++ L E
Sbjct: 34 YEGVWKKYSLTVAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLGVCTREP---- 86
Query: 97 STKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVC 156
I L + ++E + QI+ A+ +L +H ++
Sbjct: 87 --PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT-QISSAMEYL-EKKNFIHRDLA 142
Query: 157 LSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRK 216
+ +V + K+ F + G+ A+ P LA + ++ K
Sbjct: 143 ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK----WTAPESLAYNKFSI--K 196
Query: 217 SPPWSIDSWGLGCLIYEL-------FSGMRLSKTEEL---RNTASIPKSLLPDYQRLLSS 266
S W+ G L++E+ + G+ LS+ EL P+ L+ +
Sbjct: 197 SDVWA-----FGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA 251
Query: 267 M----PSRRLNSSKLIENSEYFQNKLVDTIHFMEILNLKDSVEKD 307
PS R + +++ + E + ++ D VEK+
Sbjct: 252 CWQWNPSDRPSFAEIHQAFETMFQE----------SSISDEVEKE 286
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 54.1 bits (129), Expect = 2e-08
Identities = 40/261 (15%), Positives = 96/261 (36%), Gaps = 27/261 (10%)
Query: 42 KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKIT 101
+ G ++ I +G + + L+ ++H NI V+ D TK
Sbjct: 23 NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI--------VKLYDVIHTKKR 74
Query: 102 IYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVV 161
+ +V E + +K+ ++ EG L Q+ +++ + D +++H ++ +++
Sbjct: 75 LVLVFEHLDQDLKKLLDVC-EGGLESVTAKSFLLQLLNGIAYCH-DRRVLHRDLKPQNLL 132
Query: 162 VTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWS 221
+ + + K+ F L+ G + W Y+ ++ K +
Sbjct: 133 INREGELKIADFG-LARAFGIPVRKYTHEIVTLW-----YRAPDVLMGS-----KKYSTT 181
Query: 222 IDSWGLGCLIYELFSGMRL----SKTEELRNTASIPKSLLPDYQRLLSSMP--SRRLNSS 275
ID W +GC+ E+ +G L S+ ++L I + ++ +P
Sbjct: 182 IDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVY 241
Query: 276 KLIENSEYFQNKLVDTIHFME 296
+ + + + I +
Sbjct: 242 EPLPWESFLKGLDESGIDLLS 262
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.5 bits (130), Expect = 2e-08
Identities = 41/299 (13%), Positives = 102/299 (34%), Gaps = 36/299 (12%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
G V++ +S H ++ L+ ++H N++ L +
Sbjct: 35 CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV--FTPARSL 92
Query: 97 STKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVC 156
+Y+VT + I + D++ + + QI + + ++ + ++H ++
Sbjct: 93 EEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYI-HSADIIHRDLK 148
Query: 157 LSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRK 216
S++ V + + K+ F + D ++ Y+ E+ +
Sbjct: 149 PSNLAVNEDCELKILDFGLARHTD---------DEMTGYVATRWYRAPEIMLNWM----- 194
Query: 217 SPPWSIDSWGLGCLIYELFSGMRLSKTEE--------LRNTASIPKSLLPDYQRLLSSMP 268
++D W +GC++ EL +G L + LR + LL +
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNY 254
Query: 269 SRRLNSSKLIENSEYFQNKLVDTIHFMEILNLKDSVE--------KDTFFRKLPNLAEQ 319
+ L + + F + +E + + DS + +F + + ++
Sbjct: 255 IQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 313
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 52.8 bits (126), Expect = 5e-08
Identities = 40/268 (14%), Positives = 86/268 (32%), Gaps = 44/268 (16%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95
S+ +G ++ + + + L V HP I +
Sbjct: 21 HLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFI--------IRMWGT 72
Query: 96 TSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGL-NQIAKAVSFLNNDCKLVHGN 154
I+++ + + ++ L + + A ++ A+ +L+ +++ +
Sbjct: 73 FQDAQQIFMIMDYIE--GGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLH-SKDIIYRD 129
Query: 155 VCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAV 214
+ ++++ + K+ F G Y E+ +
Sbjct: 130 LKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTP---------DYIAPEVVST----- 175
Query: 215 RKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTA--------SIPKSLLPDYQRLLSS 266
K SID W G LIYE+ +G T P D + LLS
Sbjct: 176 -KPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLSR 234
Query: 267 M----PSRRL----NSSKLIENSEYFQN 286
+ S+RL N ++ ++N +F+
Sbjct: 235 LITRDLSQRLGNLQNGTEDVKNHPWFKE 262
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 51.8 bits (123), Expect = 1e-07
Identities = 27/267 (10%), Positives = 69/267 (25%), Gaps = 43/267 (16%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
+ GT G V+I K + ++ + +
Sbjct: 24 YLGTDIAAGEEVAIKLECVKTKHP----QLHIESKIYKMMQGGVGIPTIR-------WCG 72
Query: 97 STKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVC 156
+ +V E ++ S + + +Q+ + +++ +H +V
Sbjct: 73 AEGDYNVMVME-LLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH-SKNFIHRDVK 130
Query: 157 LSSVVVTQTLDWKL---HAFDVLSEFDGNNEAANGPMLQYAWLVG-AQYKPVELAKSDWT 212
+ ++ L F + ++ + P + L G A+Y +
Sbjct: 131 PDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLG--- 187
Query: 213 AVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTA----------------SIPKSL 256
D LG ++ G + + + K
Sbjct: 188 ---IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGY 244
Query: 257 LPDYQRLLSSM----PSRRLNSSKLIE 279
++ L+ + + S L +
Sbjct: 245 PSEFATYLNFCRSLRFDDKPDYSYLRQ 271
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.8 bits (123), Expect = 1e-07
Identities = 36/277 (12%), Positives = 83/277 (29%), Gaps = 48/277 (17%)
Query: 32 GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91
+ + V++ + + +H NI +
Sbjct: 32 AEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNI--------IN 83
Query: 92 NIDATSTKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLN-------------Q 136
+ A + +Y++ E L E ++ G + + Q
Sbjct: 84 LLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQ 143
Query: 137 IAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWL 196
+A+ + +L K +H ++ +V+VT+ K+ F + + +
Sbjct: 144 VARGMEYLA-SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN----GR 198
Query: 197 VGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL----SKTEELR----- 247
+ ++ E + D W G L++E+F+ EEL
Sbjct: 199 LPVKWMAPEALFD------RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE 252
Query: 248 -NTASIPKSLLPDYQRLLSSM----PSRRLNSSKLIE 279
+ P + + ++ PS+R +L+E
Sbjct: 253 GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 289
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.4 bits (122), Expect = 2e-07
Identities = 39/280 (13%), Positives = 88/280 (31%), Gaps = 40/280 (14%)
Query: 40 TSKDDGSPVSI--FSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97
+ D G ++ + + R + L +R L LH
Sbjct: 47 SGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE----- 101
Query: 98 TKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCL 157
TK+ + + L + + + + +I A+ L+ +++ ++ L
Sbjct: 102 TKLHLILDYINGGELFTHLSQ---RERFTEHEVQIYVGEIVLALEHLH-KLGIIYRDIKL 157
Query: 158 SSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKS 217
++++ L F + EF + + +A
Sbjct: 158 ENILLDSNGHVVLTDFGLSKEFVAD---------ETERAYDFCGTIEYMAPDIVRGGDSG 208
Query: 218 PPWSIDSWGLGCLIYELFSGMRLSKTEELRNTAS------------IPKSLLPDYQRLLS 265
++D W LG L+YEL +G + +N+ + P+ + + L+
Sbjct: 209 HDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQ 268
Query: 266 SM----PSRRLNSSKL----IENSEYFQNKLVDTIHFMEI 297
+ P +RL I+ +FQ D + ++
Sbjct: 269 RLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKV 308
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.7 bits (118), Expect = 5e-07
Identities = 36/253 (14%), Positives = 75/253 (29%), Gaps = 41/253 (16%)
Query: 44 DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIY 103
V+I I + + K + + H ++ + + I+
Sbjct: 27 GQYDVAIKMIKEGSMSEDEF---IEEAKVMMNLSHEKLVQL--------YGVCTKQRPIF 75
Query: 104 IVTEPVMPLSEKIKELGLEGSQRDEYYAWGL-NQIAKAVSFLNNDCKLVHGNVCLSSVVV 162
I+TE M + L + + + +A+ +L + +H ++ + +V
Sbjct: 76 IITEY-MANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ-FLHRDLAARNCLV 133
Query: 163 TQTLDWKLHAFDVLSEF-DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWS 221
K+ F + D ++ G W P L S +++
Sbjct: 134 NDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWS-----PPEVLMYSKFSS-------K 181
Query: 222 IDSWGLGCLIYEL-------FSGMRLSKTEEL---RNTASIPKSLLPDYQRLLSSM---- 267
D W G L++E+ + S+T E P ++ S
Sbjct: 182 SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEK 241
Query: 268 PSRRLNSSKLIEN 280
R L+ N
Sbjct: 242 ADERPTFKILLSN 254
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 49.8 bits (118), Expect = 6e-07
Identities = 35/259 (13%), Positives = 73/259 (28%), Gaps = 32/259 (12%)
Query: 37 FQGTSKDDGSPVSIFSIS--GTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94
G K G +I + + + + HPN++
Sbjct: 43 CSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKST-- 100
Query: 95 ATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGN 154
+ I+TE + S +G L IA + +L + VH +
Sbjct: 101 ------PVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN-YVHRD 153
Query: 155 VCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAV 214
+ +++V L K+ F + + + P+ +
Sbjct: 154 LAARNILVNSNLVCKVSDFGLSRFLEDDTS------DPTYTSALGGKIPIRWTAPEAIQY 207
Query: 215 RKSPPWSIDSWGLGCLIYELFSGMRL----SKTEELRN------TASIPKSLLPDYQRLL 264
RK S D W G +++E+ S +++ N P +L+
Sbjct: 208 RKFTSAS-DVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLM 266
Query: 265 SSM----PSRRLNSSKLIE 279
+ R +++
Sbjct: 267 LDCWQKDRNHRPKFGQIVN 285
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.0 bits (116), Expect = 9e-07
Identities = 28/237 (11%), Positives = 75/237 (31%), Gaps = 34/237 (14%)
Query: 58 AQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIK 117
+Q + V + ++ H N++ + +VTE S +
Sbjct: 50 SQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPM---------KMVTELAPLGSLLDR 100
Query: 118 ELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177
+G + Q+A+ + +L + +H ++ ++++ K+ F ++
Sbjct: 101 LRKHQGHFLLGTLSRYAVQVAEGMGYLESKR-FIHRDLAARNLLLATRDLVKIGDFGLMR 159
Query: 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG 237
N++ + + + ++ + D+W G ++E+F+
Sbjct: 160 ALPQNDD----HYVMQEHRKVPFAWC-----APESLKTRTFSHASDTWMFGVTLWEMFTY 210
Query: 238 MR-----------LSKTEELRNTASIPKSLLPDYQRLLSSM----PSRRLNSSKLIE 279
+ L K ++ P+ D ++ P R L +
Sbjct: 211 GQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD 267
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.6 bits (115), Expect = 1e-06
Identities = 41/242 (16%), Positives = 75/242 (30%), Gaps = 49/242 (20%)
Query: 67 RNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQR 126
+ ++ +RH ++ E I YIVTE + S G G
Sbjct: 60 LQEAQVMKKLRHEKLVQLYAVVSEEPI---------YIVTEYMSKGSLLDFLKGETGKYL 110
Query: 127 DEYYAWGL-NQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNN-- 183
+ QIA ++++ VH ++ ++++V + L K+ F + + N
Sbjct: 111 RLPQLVDMAAQIASGMAYVER-MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 169
Query: 184 --EAANGPMLQYA--WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMR 239
+ A P+ A + ++ KSD W G L+ EL + R
Sbjct: 170 ARQGAKFPIKWTAPEAALYGRFTI----KSDV-------------WSFGILLTELTTKGR 212
Query: 240 LSKTEELRNTA----------SIPKSLLPDYQRLLSSM----PSRRLNSSKLIEN-SEYF 284
+ + P L+ P R L +YF
Sbjct: 213 VPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 272
Query: 285 QN 286
+
Sbjct: 273 TS 274
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.3 bits (114), Expect = 1e-06
Identities = 32/261 (12%), Positives = 78/261 (29%), Gaps = 43/261 (16%)
Query: 42 KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKIT 101
+ + V+I +++ + N ++ +++ L
Sbjct: 47 DEPETRVAIKTVNEAASMR-ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ--------P 97
Query: 102 IYIVTEPVM---------PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVH 152
++ E + L + + +IA +++LN K VH
Sbjct: 98 TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA-NKFVH 156
Query: 153 GNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWT 212
++ + +V + K+ F + + + G L+ ++ E K
Sbjct: 157 RDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG----GKGLLPVRWMSPESLKDG-- 210
Query: 213 AVRKSPPWSIDSWGLGCLIYELFSGMR-----LSKTEELR-----NTASIPKSLLPDYQR 262
+ + W G +++E+ + LS + LR P +
Sbjct: 211 --VFTTYSDV--WSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFE 266
Query: 263 LLSSM----PSRRLNSSKLIE 279
L+ P R + ++I
Sbjct: 267 LMRMCWQYNPKMRPSFLEIIS 287
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.8 bits (113), Expect = 2e-06
Identities = 32/251 (12%), Positives = 81/251 (32%), Gaps = 39/251 (15%)
Query: 44 DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIY 103
+ V+I +I + + + + HP ++ + I
Sbjct: 28 NKDKVAIKTIREGAMSEEDF---IEEAEVMMKLSHPKLVQL--------YGVCLEQAPIC 76
Query: 104 IVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT 163
+V E + G E + + +++L C ++H ++ + +V
Sbjct: 77 LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVG 135
Query: 164 QTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVG-AQYKPVELAKSDWTAVRKSPPWSI 222
+ K+ S+F + ++ E+ + +
Sbjct: 136 ENQVIKV------SDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK------S 183
Query: 223 DSWGLGCLIYELFSGMRL-----SKTEELRNTAS-----IPKSLLPDYQRLLSSM----P 268
D W G L++E+FS ++ S +E + + ++ P+ ++++ P
Sbjct: 184 DVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERP 243
Query: 269 SRRLNSSKLIE 279
R S+L+
Sbjct: 244 EDRPAFSRLLR 254
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.2 bits (114), Expect = 2e-06
Identities = 36/261 (13%), Positives = 76/261 (29%), Gaps = 33/261 (12%)
Query: 58 AQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIK 117
G ++ ++ HPN+L+ L ++ + +V M +
Sbjct: 67 TDIGEVSQFLTEGIIMKDFSHPNVLSLLGI-------CLRSEGSPLVVLPY-MKHGDLRN 118
Query: 118 ELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177
+ E G K VH ++ + ++ + K+ A L+
Sbjct: 119 FIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKV-ADFGLA 177
Query: 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG 237
+ E + A L L +T D W G L++EL +
Sbjct: 178 RDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT-------KSDVWSFGVLLWELMTR 230
Query: 238 MR-----LSKTEELRNTASIPKSLLPDY---------QRLLSSMPSRRLNSSKLIENSEY 283
++ + + L P+Y + R + S+L+
Sbjct: 231 GAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 290
Query: 284 FQNKLVDT--IHFME-ILNLK 301
+ + +H +N+K
Sbjct: 291 IFSTFIGEHYVHVNATYVNVK 311
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.2 bits (114), Expect = 2e-06
Identities = 33/257 (12%), Positives = 75/257 (29%), Gaps = 42/257 (16%)
Query: 41 SKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKI 100
+ V+I + + + + + +P I+ + + E
Sbjct: 32 MRKKQIDVAIKVLK-QGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA-------- 82
Query: 101 TIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWG-LNQIAKAVSFLNNDCKLVHGNVCLSS 159
+ +V E + K L + + L+Q++ + +L VH ++ +
Sbjct: 83 -LMLVME-MAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE-KNFVHRDLAARN 139
Query: 160 VVVTQTLDWKLHAF---DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRK 216
V++ K+ F L D A + W Y P + +++
Sbjct: 140 VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKW-----YAPECINFRKFSS--- 191
Query: 217 SPPWSIDSWGLGCLIYEL-------FSGMRLSKTEEL---RNTASIPKSLLPDYQRLLSS 266
D W G ++E + M+ + P P+ L+S
Sbjct: 192 ----RSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSD 247
Query: 267 M----PSRRLNSSKLIE 279
R + + +
Sbjct: 248 CWIYKWEDRPDFLTVEQ 264
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.9 bits (113), Expect = 2e-06
Identities = 40/267 (14%), Positives = 82/267 (30%), Gaps = 39/267 (14%)
Query: 37 FQGTSKDDGS--PVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENI 93
+ K DG +I + ++D H ++ L + HPNI+ L + E
Sbjct: 27 LKARIKKDGLRMDAAIKRMKEYASKDDH-RDFAGELEVLCKLGHHPNIINLLGACEHRGY 85
Query: 94 D------ATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGL-NQIAKAVSFLNN 146
A + ++ V+ S +A+ + +L+
Sbjct: 86 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ 145
Query: 147 DCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVEL 206
+ +H ++ +++V + K+ F LS L W L
Sbjct: 146 -KQFIHRDLAARNILVGENYVAKIADFG-LSRGQEVYVKKTMGRLPVRW-----MAIESL 198
Query: 207 AKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL-----SKTEELRNTAS-----IPKSL 256
S +T + D W G L++E+ S + E P +
Sbjct: 199 NYSVYTT-------NSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNC 251
Query: 257 LPDYQRLLSSM----PSRRLNSSKLIE 279
+ L+ P R + ++++
Sbjct: 252 DDEVYDLMRQCWREKPYERPSFAQILV 278
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 47.5 bits (112), Expect = 2e-06
Identities = 25/207 (12%), Positives = 59/207 (28%), Gaps = 25/207 (12%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
F+GT+ + V+I + R+ + + + + ++
Sbjct: 22 FEGTNLLNNQQVAIKFEP----RRSDAPQLRDEYRTYKLLAGCTGIPNVY-------YFG 70
Query: 97 STKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVH---- 152
+ +V + + P E + +L Q+ V ++ + LV+
Sbjct: 71 QEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMA-AKQMLARVQSIH-EKSLVYRDIK 128
Query: 153 -GNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVG-AQYKPVELAKSD 210
N + + F ++ + + P + L G A+Y +
Sbjct: 129 PDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHL-- 186
Query: 211 WTAVRKSPPWSIDSWGLGCLIYELFSG 237
+ D LG + G
Sbjct: 187 ----GREQSRRDDLEALGHVFMYFLRG 209
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.5 bits (112), Expect = 3e-06
Identities = 37/260 (14%), Positives = 79/260 (30%), Gaps = 48/260 (18%)
Query: 40 TSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99
+ ++ V+I + D +R HP+I+ + T+
Sbjct: 30 SPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI---------TE 79
Query: 100 ITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSS 159
++I+ E + + S Q++ A+++L + VH ++ +
Sbjct: 80 NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL-ESKRFVHRDIAARN 138
Query: 160 VVVTQTLDWKLHAFDVLSEFDGNNEAAN----GPMLQYAW--LVGAQYKPVELAKSDWTA 213
V+V+ KL F + + + P+ A + ++ SD
Sbjct: 139 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS----ASDV-- 192
Query: 214 VRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTA----------SIPKSLLPDYQRL 263
W G ++E+ N +P + P L
Sbjct: 193 -----------WMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSL 241
Query: 264 LSSM----PSRRLNSSKLIE 279
++ PSRR ++L
Sbjct: 242 MTKCWAYDPSRRPRFTELKA 261
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.9 bits (113), Expect = 3e-06
Identities = 38/263 (14%), Positives = 84/263 (31%), Gaps = 43/263 (16%)
Query: 37 FQGTSKDDGS----PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92
++G +G PV+I + + + + + +V +P++ L
Sbjct: 26 YKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVDNPHVCRLLGICLTST 84
Query: 93 IDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVH 152
+ ++T+ + + + +Y QIAK +++L + +LVH
Sbjct: 85 ---------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED-RRLVH 134
Query: 153 GNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEA--ANGPMLQYAWLVGAQYKPVELAKSD 210
++ +V+V K+ F + + A G + W+ +E
Sbjct: 135 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM------ALESIL-- 186
Query: 211 WTAVRKSPPWSIDSWGLGCLIYEL-------FSGMRLSKTEEL---RNTASIPKSLLPDY 260
+ D W G ++EL + G+ S+ + P D
Sbjct: 187 ----HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDV 242
Query: 261 QRLLSSM----PSRRLNSSKLIE 279
++ R +LI
Sbjct: 243 YMIMVKCWMIDADSRPKFRELII 265
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.6 bits (112), Expect = 3e-06
Identities = 36/283 (12%), Positives = 86/283 (30%), Gaps = 28/283 (9%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
V+I +S H A + ++ V H NI++ L+ +
Sbjct: 34 CAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 93
Query: 97 STKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVC 156
+ + VM L + ++ E ++ L Q+ + L++ +H ++
Sbjct: 94 FQDVYL------VMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI-IHRDLK 146
Query: 157 LSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYK--PVELAKSDWTAV 214
S++VV K+ F + + V +Y P + +
Sbjct: 147 PSNIVVKSDCTLKILDFGLARTAGTSF--------MMTPYVVTRYYRAPEVILGMGYK-- 196
Query: 215 RKSPPWSIDSWGLGCLIYELFSGMRL----SKTEELRNTASIPKSLLPDYQRLLSSMPSR 270
++D W +GC++ E+ L ++ + P++ + L
Sbjct: 197 -----ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 251
Query: 271 RLNSSKLIENSEYFQNKLVDTIHFMEILNLKDSVEKDTFFRKL 313
+ + + + N + + K+
Sbjct: 252 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 294
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 46.7 bits (110), Expect = 6e-06
Identities = 38/269 (14%), Positives = 85/269 (31%), Gaps = 46/269 (17%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95
K+ G+ ++ + + N + L+ V P ++
Sbjct: 58 MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF------SFK 111
Query: 96 TSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNV 155
++ + + + + ++ +G +YA QI +L+ L++ ++
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA---QIVLTFEYLH-SLDLIYRDL 167
Query: 156 CLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPM--LQYAWLVGAQYKPVELAKSDWTA 213
++++ Q ++ F G G L ++ Y DW
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNK----AVDW-- 221
Query: 214 VRKSPPWSIDSWGLGCLIYELFSG------------MRLSKTEELRNTASIPKSLLPDYQ 261
W LG LIYE+ +G + ++R + L +
Sbjct: 222 -----------WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 270
Query: 262 RLLSSMPSRRLNSSKL----IENSEYFQN 286
LL ++R + K I+N ++F
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFAT 299
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 46.4 bits (109), Expect = 6e-06
Identities = 34/281 (12%), Positives = 84/281 (29%), Gaps = 57/281 (20%)
Query: 36 HFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95
+ + V++ + A A + + +PNI+ L V
Sbjct: 34 APGLLPYEPFTMVAVKMLK-EEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK--- 89
Query: 96 TSTKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYYAWGLN------------------ 135
+ ++ E L+E ++ + +
Sbjct: 90 -----PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLC 144
Query: 136 ---QIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQ 192
Q+A +++L+ K VH ++ + +V + + K+ F + +
Sbjct: 145 IARQVAAGMAYLSE-RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY----KAD 199
Query: 193 YAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMR-----LSKTEELR 247
+ ++ P E + D W G +++E+FS ++ E +
Sbjct: 200 GNDAIPIRWMPPESIFYNRYTTE------SDVWAYGVVLWEIFSYGLQPYYGMAHEEVIY 253
Query: 248 -----NTASIPKSLLPDYQRLLSSM----PSRRLNSSKLIE 279
N + P++ + L+ P+ R + +
Sbjct: 254 YVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHR 294
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.6 bits (107), Expect = 1e-05
Identities = 33/256 (12%), Positives = 74/256 (28%), Gaps = 33/256 (12%)
Query: 38 QGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97
+ +S PV+I ++ + + H NI + S
Sbjct: 29 KTSSGKKEVPVAIKTLK-AGYTEKQRVDFLGEAGIMGQFSHHNI--------IRLEGVIS 79
Query: 98 TKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCL 157
+ I+TE + + +G L IA + + + VH ++
Sbjct: 80 KYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKY-LANMNYVHRDLAA 138
Query: 158 SSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKS 217
+++V L K+ + LS ++ A + + E +
Sbjct: 139 RNILVNSNLVCKV-SDFGLSRVLEDDPEATYTTSGGKIPIR--WTAPEAISY------RK 189
Query: 218 PPWSIDSWGLGCLIYELFSGMRLSKTEELRNTA----------SIPKSLLPDYQRLLSSM 267
+ D W G +++E+ + E + P +L+
Sbjct: 190 FTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQC 249
Query: 268 ----PSRRLNSSKLIE 279
+RR + ++
Sbjct: 250 WQQERARRPKFADIVS 265
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.4 bits (104), Expect = 4e-05
Identities = 37/282 (13%), Positives = 85/282 (30%), Gaps = 58/282 (20%)
Query: 36 HFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENID 94
+ + V++ + A A + +K + + H NI+ L + +
Sbjct: 58 AYGISKTGVSIQVAVKMLK-EKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG-- 114
Query: 95 ATSTKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWG------------------- 133
IY++ E L ++ + S+ + Y
Sbjct: 115 ------PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLC 168
Query: 134 -LNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQ 192
Q+AK + FL VH ++ +V+VT K+ F + + ++ +++
Sbjct: 169 FAYQVAKGMEFL-EFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNY----VVR 223
Query: 193 YAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMR-----LSKTEELR 247
+ ++ E + + S+ G L++E+FS +
Sbjct: 224 GNARLPVKWMAPESLFEGIY----TIKSDVWSY--GILLWEIFSLGVNPYPGIPVDANFY 277
Query: 248 N------TASIPKSLLPDYQRLLSSM----PSRRLNSSKLIE 279
P + ++ S +R + L
Sbjct: 278 KLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTS 319
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.0 bits (103), Expect = 4e-05
Identities = 36/279 (12%), Positives = 83/279 (29%), Gaps = 57/279 (20%)
Query: 36 HFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENID 94
+ D V++ + +A A + +K L + H NI+ L + +
Sbjct: 44 AYGLIKSDAAMTVAVKMLK-PSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG-- 100
Query: 95 ATSTKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYYAWGLN---------------QI 137
++TE L ++ A + Q+
Sbjct: 101 ------PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQV 154
Query: 138 AKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL--HAFDVLSEFDGNNEAANGPMLQYAW 195
AK ++FL + +H ++ ++++T K+ + D N L W
Sbjct: 155 AKGMAFLAS-KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKW 213
Query: 196 LVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTA----- 250
+ + + + D W G ++ELFS ++
Sbjct: 214 M------------APESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 261
Query: 251 ------SIPKSLLPDYQRLLSSM----PSRRLNSSKLIE 279
P+ + ++ + P +R ++++
Sbjct: 262 KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 771 | |||
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 99.97 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.7 | |
| d1b3ua_ | 588 | Constant regulatory domain of protein phosphatase | 99.26 | |
| d1b3ua_ | 588 | Constant regulatory domain of protein phosphatase | 99.24 | |
| d1ibrb_ | 458 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 98.05 | |
| d2vglb_ | 579 | Adaptin beta subunit N-terminal fragment {Human (H | 97.86 | |
| d2vglb_ | 579 | Adaptin beta subunit N-terminal fragment {Human (H | 97.73 | |
| d1q1sc_ | 434 | Importin alpha {Mouse (Mus musculus) [TaxId: 10090 | 97.66 | |
| d1oyza_ | 276 | Hypothetical protein YibA {Escherichia coli [TaxId | 97.41 | |
| d1ibrb_ | 458 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 97.41 | |
| d1u6gc_ | 1207 | Cullin-associated NEDD8-dissociated protein 1 (Tip | 97.3 | |
| d1te4a_ | 111 | MTH187 {Archaeon Methanobacterium thermoautotrophi | 97.3 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 97.22 | |
| d1q1sc_ | 434 | Importin alpha {Mouse (Mus musculus) [TaxId: 10090 | 97.05 | |
| d1u6gc_ | 1207 | Cullin-associated NEDD8-dissociated protein 1 (Tip | 97.04 | |
| d1qgra_ | 876 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 96.97 | |
| d1qbkb_ | 888 | Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96 | 96.84 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 96.69 | |
| d1wa5b_ | 503 | Karyopherin alpha {Baker's yeast (Saccharomyces ce | 96.59 | |
| d1wa5b_ | 503 | Karyopherin alpha {Baker's yeast (Saccharomyces ce | 96.57 | |
| d2vgla_ | 584 | Adaptin alpha C subunit N-terminal fragment {Mouse | 96.35 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 96.34 | |
| d1xqra1 | 264 | Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi | 96.33 | |
| d1qgra_ | 876 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 96.09 | |
| d1qbkb_ | 888 | Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96 | 96.08 | |
| d1te4a_ | 111 | MTH187 {Archaeon Methanobacterium thermoautotrophi | 96.04 | |
| d1oyza_ | 276 | Hypothetical protein YibA {Escherichia coli [TaxId | 95.66 | |
| d2bpta1 | 861 | Importin beta {Baker's yeast (Saccharomyces cerevi | 95.39 | |
| d2bpta1 | 861 | Importin beta {Baker's yeast (Saccharomyces cerevi | 95.28 | |
| d2vgla_ | 584 | Adaptin alpha C subunit N-terminal fragment {Mouse | 95.08 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 93.98 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 93.88 | |
| d1xm9a1 | 457 | Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} | 93.72 | |
| d1xqra1 | 264 | Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi | 93.55 | |
| d1lrva_ | 233 | Leucine-rich repeat variant {Azotobacter vinelandi | 93.23 | |
| d1jdha_ | 529 | beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | 93.04 | |
| d1jdha_ | 529 | beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | 92.85 | |
| d1lrva_ | 233 | Leucine-rich repeat variant {Azotobacter vinelandi | 88.81 | |
| d1xm9a1 | 457 | Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} | 88.13 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 86.12 |
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-43 Score=373.56 Aligned_cols=251 Identities=17% Similarity=0.252 Sum_probs=205.0
Q ss_pred hhhhhhhhcCCCCCCCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCC
Q 004157 2 FKFLKGVVGGSGAGVKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPN 80 (771)
Q Consensus 2 ~~~l~~~~~~s~~~~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPn 80 (771)
++.+++.+. .+. +.-+|++.++||.|+ | +||+|+++.+|+.||||++...... ..+.+.+|+++|++|+|||
T Consensus 6 ~~~l~~~~~-~~d--p~~~Y~~~~~iG~G~fg--~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~Hpn 78 (293)
T d1yhwa1 6 LEKLRSIVS-VGD--PKKKYTRFEKIGQGASG--TVYTAMDVATGQEVAIRQMNLQQQP--KKELIINEILVMRENKNPN 78 (293)
T ss_dssp HHHHHHHSB-SSC--TTTTBCSCEECCCSSSC--EEEEEEBTTTCCEEEEEEEEGGGCS--CHHHHHHHHHHHHHCCCTT
T ss_pred HHHHhccCC-CCC--cccccEEEEEEecCcCc--EEEEEEECCCCCEEEEEEEecccCh--HHHHHHHHHHHHHhCCCCC
Confidence 355667663 222 456899999999999 9 9999999999999999999865333 3467899999999999999
Q ss_pred eeEEeeeEEecccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCC
Q 004157 81 ILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLS 158 (771)
Q Consensus 81 Ilkv~d~~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~ 158 (771)
|++++++++++ +++||||||| ++|.+++.+..+ ....+..++.||+.||.|||+ .||+||||||+
T Consensus 79 Iv~~~~~~~~~--------~~~~ivmEy~~gg~L~~~~~~~~l----~~~~~~~i~~qi~~aL~yLH~-~~iiHrDiKp~ 145 (293)
T d1yhwa1 79 IVNYLDSYLVG--------DELWVVMEYLAGGSLTDVVTETCM----DEGQIAAVCRECLQALEFLHS-NQVIHRDIKSD 145 (293)
T ss_dssp BCCEEEEEEET--------TEEEEEEECCTTCBHHHHHHHSCC----CHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGG
T ss_pred EeeEeEEEEEC--------CEEEEEEEecCCCcHHHHhhccCC----CHHHHHHHHHHHHHHHHHHHH-CCCcccCCcHH
Confidence 99999999874 4899999999 579888876543 344566779999999999997 89999999999
Q ss_pred CEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCC
Q 004157 159 SVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM 238 (771)
Q Consensus 159 NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~ 238 (771)
||+++.+|.+||+|||+++....... ......++..|+|||++.+ ..++.++|||||||++|+|++|.
T Consensus 146 NILl~~~~~vkl~DFG~a~~~~~~~~------~~~~~~gt~~Y~aPE~~~~------~~~~~~~DiwSlGvilyemltG~ 213 (293)
T d1yhwa1 146 NILLGMDGSVKLTDFGFCAQITPEQS------KRSTMVGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMIEGE 213 (293)
T ss_dssp GEEECTTCCEEECCCTTCEECCSTTC------CBCCCCSCGGGCCHHHHSS------SCBCTHHHHHHHHHHHHHHHHSS
T ss_pred HeEECCCCcEeeccchhheeeccccc------cccccccCCCccChhhhcC------CCCCchhceehHhHHHHHHhhCC
Confidence 99999999999999999987754321 1122344568999999986 35778999999999999999999
Q ss_pred CCCChhhh---------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 239 RLSKTEEL---------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 239 ~p~~~~~l---------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
+||..... .....++..+.+++.+||..||.+||++.++++| +||+
T Consensus 214 ~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~H-p~~~ 274 (293)
T d1yhwa1 214 PPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH-QFLK 274 (293)
T ss_dssp CTTTTSCHHHHHHHHHHHCSCCCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTC-GGGG
T ss_pred CCCCCCCHHHHHHHHHhCCCCCCCCcccCCHHHHHHHHHHccCChhHCcCHHHHhcC-HhhC
Confidence 99854221 1113467789999999999999999999999998 5664
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-43 Score=372.54 Aligned_cols=245 Identities=15% Similarity=0.183 Sum_probs=195.6
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.+|++.+.||+|+ | +||+|+++.+|+.||||++.++...+ ..+.+++|+++|++|+||||++++++++++
T Consensus 5 ~dy~~~~~lG~G~fg--~V~~~~~~~~~~~vAiK~i~~~~~~~-~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~------ 75 (271)
T d1nvra_ 5 EDWDLVQTLGEGAYG--EVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENVVKFYGHRREG------ 75 (271)
T ss_dssp TEEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHTCCCTTBCCEEEEEEET------
T ss_pred cceEEEEEEecCcCe--EEEEEEECCCCCEEEEEEEehhhcch-HHHHHHHHHHHHHhCCCCCEeeEeeeeccC------
Confidence 3699999999998 8 99999999999999999998754332 345688999999999999999999999874
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
+.+||||||| ++|.++|+.... .....+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+|||+
T Consensus 76 --~~~~ivmEy~~gg~L~~~l~~~~~---l~e~~~~~i~~qi~~al~ylH~-~~IiHrDiKp~NILl~~~~~~KL~DFG~ 149 (271)
T d1nvra_ 76 --NIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMAGVVYLHG-IGITHRDIKPENLLLDERDNLKISDFGL 149 (271)
T ss_dssp --TEEEEEEECCTTEEGGGGSBTTTB---CCHHHHHHHHHHHHHHHHHHHH-TTEECSCCCGGGEEECTTCCEEECCCTT
T ss_pred --ceeEEEEeccCCCcHHHHHhcCCC---CCHHHHHHHHHHHHHHHHHHHH-cCCccCcccHHHEEECCCCCEEEccchh
Confidence 4899999999 579988865432 2344566779999999999997 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh---------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--------- 246 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l--------- 246 (771)
++......... ......++..|+|||++.+. ..++.++|||||||++|||++|.+||.....
T Consensus 150 a~~~~~~~~~~----~~~~~~GT~~Y~APE~~~~~-----~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~ 220 (271)
T d1nvra_ 150 ATVFRYNNRER----LLNKMCGTLPYVAPELLKRR-----EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 220 (271)
T ss_dssp CEECEETTEEC----CBCCCCSCGGGSCTHHHHCS-----SBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHH
T ss_pred heeeccCCccc----cccceeeCcCccCHhHhcCC-----CCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHh
Confidence 98764322110 11223455689999998763 2245689999999999999999998853211
Q ss_pred ------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcchh
Q 004157 247 ------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKL 288 (771)
Q Consensus 247 ------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n~l 288 (771)
.....++..+.+++.+||+.||.+|||++++++| +||+.++
T Consensus 221 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h-pwf~~~l 267 (271)
T d1nvra_ 221 EKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD-RWYNKPL 267 (271)
T ss_dssp TTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC-TTTTCCC
T ss_pred cCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC-HhhCcCC
Confidence 0113567889999999999999999999999998 6776543
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.7e-43 Score=366.92 Aligned_cols=236 Identities=18% Similarity=0.278 Sum_probs=196.9
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
+|++++.||+|+ | +||+|+++.+|+.||||++.+.... ......+++|+++|++++||||++++++++++
T Consensus 7 dy~i~~~iG~G~fg--~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~------ 78 (263)
T d2j4za1 7 DFEIGRPLGKGKFG--NVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA------ 78 (263)
T ss_dssp GEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS------
T ss_pred HeEEEEEEecCCCc--EEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEEC------
Confidence 599999999998 8 9999999999999999999754222 23456788999999999999999999999874
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+||||||| ++|.++|...... ....+..++.||+.||+|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 79 --~~~~ivmEy~~~g~L~~~l~~~~~l---~e~~~~~i~~qi~~al~~lH~-~~ivHrDiKp~Nill~~~~~~kl~DFG~ 152 (263)
T d2j4za1 79 --TRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANALSYCHS-KRVIHRDIKPENLLLGSAGELKIADFGW 152 (263)
T ss_dssp --SEEEEEEECCTTCBHHHHHHHHSSC---CHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEECTTSCEEECCCCS
T ss_pred --CEEEEEEeecCCCcHHHHHhhcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeeeeeeccccceecCCCCEeecccce
Confidence 4899999999 5899999876542 344466679999999999997 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh--------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~-------- 247 (771)
+....... .....++..|+|||++.+ ..++.++|||||||++|||++|..||......
T Consensus 153 a~~~~~~~--------~~~~~Gt~~Y~APE~~~~------~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~ 218 (263)
T d2j4za1 153 SVHAPSSR--------RTTLCGTLDYLPPEMIEG------RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 218 (263)
T ss_dssp CSCCCCCC--------CEETTEEGGGCCHHHHTT------CCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT
T ss_pred eeecCCCc--------ccccCCCCcccCHHHHcC------CCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHc
Confidence 97665421 112234569999999987 46778999999999999999999998653321
Q ss_pred ----ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 248 ----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 248 ----~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
....+|+.+.+++.+||+.||.+|||+.++++| +||
T Consensus 219 ~~~~~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~h-p~~ 258 (263)
T d2j4za1 219 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH-PWI 258 (263)
T ss_dssp TCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTC-HHH
T ss_pred CCCCCCccCCHHHHHHHHHHccCCHhHCcCHHHHHcC-cCc
Confidence 113467789999999999999999999999999 455
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.7e-43 Score=366.15 Aligned_cols=244 Identities=19% Similarity=0.217 Sum_probs=190.2
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.+|++.+.||.|+ | +||+|+++.+|+.||||++......+...+.+.+|+++|++|+||||+++++++.++.
T Consensus 4 edy~~~~~iG~G~fg--~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~----- 76 (269)
T d2java1 4 EDYEVLYTIGTGSYG--RCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRT----- 76 (269)
T ss_dssp GGEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC-------
T ss_pred hhCEEeEEEecCCCe--EEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCC-----
Confidence 4699999999998 8 9999999999999999999987666666788999999999999999999999987543
Q ss_pred cccEEEEEecCC--cchHHHHHHhCC-CCCCcHHHHHHHHHHHHHHHHHHHcCC----CceecCCCCCCEEEcCCCcEEE
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDC----KLVHGNVCLSSVVVTQTLDWKL 170 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~----~ivH~dIkp~NI~v~~~G~~KL 170 (771)
...+||||||| ++|.+++.+... ........++.++.||+.||.|||+.. +|+||||||+|||++.+|.+||
T Consensus 77 -~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl 155 (269)
T d2java1 77 -NTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKL 155 (269)
T ss_dssp ---CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEE
T ss_pred -CCEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEE
Confidence 34789999999 589998875321 122334556777999999999999722 4999999999999999999999
Q ss_pred EccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh---
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--- 247 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~--- 247 (771)
+|||++........ ......++..|+|||++.+ ..++.++|||||||++|||++|.+||......
T Consensus 156 ~DFG~a~~~~~~~~------~~~~~~gt~~Y~APE~l~~------~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~ 223 (269)
T d2java1 156 GDFGLARILNHDTS------FAKAFVGTPYYMSPEQMNR------MSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELA 223 (269)
T ss_dssp CCHHHHHHC-----------------CCCSCCCHHHHTT------CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred eeccceeecccCCC------ccccCCCCcccCCHHHHcC------CCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHH
Confidence 99999987654211 1122345568999999876 46778999999999999999999998643211
Q ss_pred ----------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 248 ----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 248 ----------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
....+++.+.+++.+||+.||.+||++.++++|+|
T Consensus 224 ~~i~~~~~~~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~hp~ 268 (269)
T d2java1 224 GKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPL 268 (269)
T ss_dssp HHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred HHHHcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHHhCCc
Confidence 11356778999999999999999999999999954
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.7e-42 Score=360.67 Aligned_cols=241 Identities=15% Similarity=0.189 Sum_probs=196.4
Q ss_pred CCCc-eecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 18 DLPY-NIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 18 ~~~Y-~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
+.+| ++.++||.|+ | +||+|+++.++..||||++......+...+.+++|+++|++|+||||++++++++....+
T Consensus 7 ~gry~~~~~~iG~G~fg--~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~- 83 (270)
T d1t4ha_ 7 DGRFLKFDIEIGRGSFK--TVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKG- 83 (270)
T ss_dssp TSCEEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSS-
T ss_pred CCCEEEeeeEEecCcCc--EEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeecccc-
Confidence 3345 7888999998 8 999999999999999999987655555677899999999999999999999999864322
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCC--ceecCCCCCCEEEc-CCCcEEE
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCK--LVHGNVCLSSVVVT-QTLDWKL 170 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~--ivH~dIkp~NI~v~-~~G~~KL 170 (771)
...+||||||| ++|.+++++.... ....+..++.||+.||.|||+ .+ |+||||||+||+++ .+|.+||
T Consensus 84 ---~~~~~ivmE~~~~g~L~~~l~~~~~~---~~~~~~~~~~qi~~gl~yLH~-~~~~IiHrDiKp~NILl~~~~~~~Kl 156 (270)
T d1t4ha_ 84 ---KKCIVLVTELMTSGTLKTYLKRFKVM---KIKVLRSWCRQILKGLQFLHT-RTPPIIHRDLKCDNIFITGPTGSVKI 156 (270)
T ss_dssp ---CEEEEEEEECCCSCBHHHHHHHHSSC---CHHHHHHHHHHHHHHHHHHHT-SSSCCCCSCCCGGGEEESSTTSCEEE
T ss_pred ---CCEEEEEEeCCCCCcHHHHHhccccc---cHHHHHHHHHHHHHHHHHHHH-CCCCEEeCCcChhhceeeCCCCCEEE
Confidence 45899999999 5899999876532 234455669999999999996 67 99999999999997 5899999
Q ss_pred EccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----h
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----L 246 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----l 246 (771)
+|||+++...... .....++..|+|||++.+ .++.++|||||||++|||++|..||.... +
T Consensus 157 ~DFGla~~~~~~~--------~~~~~GT~~Y~aPE~~~~-------~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~ 221 (270)
T d1t4ha_ 157 GDLGLATLKRASF--------AKAVIGTPEFMAPEMYEE-------KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQI 221 (270)
T ss_dssp CCTTGGGGCCTTS--------BEESCSSCCCCCGGGGGT-------CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHH
T ss_pred eecCcceeccCCc--------cCCcccCccccCHHHhCC-------CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHH
Confidence 9999997644311 123345669999999864 46789999999999999999999985321 1
Q ss_pred -hc----------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 247 -RN----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 247 -~~----------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
+. ...+++.+.+++.+||+.+|++|||++++|+| +||
T Consensus 222 ~~~i~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~H-p~f 269 (270)
T d1t4ha_ 222 YRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH-AFF 269 (270)
T ss_dssp HHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS-GGG
T ss_pred HHHHHcCCCCcccCccCCHHHHHHHHHHccCCHhHCcCHHHHhCC-ccc
Confidence 11 12356679999999999999999999999999 555
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.8e-43 Score=376.04 Aligned_cols=242 Identities=16% Similarity=0.189 Sum_probs=198.8
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
+...+|++.+.||.|+ | +||+|+++.+|+.||||++.+.. .......+.+|+++|++|+||||++++++++++
T Consensus 3 l~~d~y~~~~~iG~G~fg--~V~~~~~~~~~~~vAiK~i~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--- 76 (322)
T d1s9ja_ 3 LKDDDFEKISELGAGNGG--VVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD--- 76 (322)
T ss_dssp CCGGGEEEEEEEECCSSC--CEEEEEETTTTEEEEEEEEECCC-CTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECS---
T ss_pred CCccCCEEEEEEecCCCe--EEEEEEECCCCcEEEEEEEChhh-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC---
Confidence 4566899999999999 9 99999999999999999998653 334567789999999999999999999999874
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
.++||||||| ++|.+++.+.+.. ....++.+++||+.||.|||+.++|+||||||+||+++.+|.+||+|
T Consensus 77 -----~~~~iVmEy~~gg~L~~~l~~~~~l---~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~D 148 (322)
T d1s9ja_ 77 -----GEISICMEHMDGGSLDQVLKKAGRI---PEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCD 148 (322)
T ss_dssp -----SEEEEEEECCTTEEHHHHHHHHSSC---CHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECC
T ss_pred -----CEEEEEEEcCCCCcHHHHHhhcCCC---CHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEee
Confidence 4899999999 5799999876542 34556777999999999999645899999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc----
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN---- 248 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~---- 248 (771)
||++....... ....+++..|+|||++.+ ..++.++|||||||++|||++|..||...+...
T Consensus 149 FGla~~~~~~~--------~~~~~GT~~Y~APEvl~~------~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~ 214 (322)
T d1s9ja_ 149 FGVSGQLIDSM--------ANSFVGTRSYMSPERLQG------THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELM 214 (322)
T ss_dssp CCCCHHHHHHT--------C---CCSSCCCCHHHHHC------SCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHH
T ss_pred CCCccccCCCc--------cccccCCccccCchHHcC------CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence 99998664311 123456679999999987 468889999999999999999998874321000
Q ss_pred -----------------------------------------------c-----CCCCcchHHHHHHHhccCCCCCCChHH
Q 004157 249 -----------------------------------------------T-----ASIPKSLLPDYQRLLSSMPSRRLNSSK 276 (771)
Q Consensus 249 -----------------------------------------------~-----~~IP~~l~~~i~~lL~~~P~~Rps~~~ 276 (771)
. ..++..+.+++.+||..||.+|||+++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e 294 (322)
T d1s9ja_ 215 FGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQ 294 (322)
T ss_dssp C------------------------------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred HHHHhcCCcccCCcccccccccccccccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHH
Confidence 0 113456888999999999999999999
Q ss_pred HhhCCCCCcc
Q 004157 277 LIENSEYFQN 286 (771)
Q Consensus 277 lL~~~~fF~n 286 (771)
+|+| +||++
T Consensus 295 ~L~H-pf~~~ 303 (322)
T d1s9ja_ 295 LMVH-AFIKR 303 (322)
T ss_dssp HHTS-HHHHH
T ss_pred HhhC-HhhCc
Confidence 9999 56643
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.6e-42 Score=362.00 Aligned_cols=246 Identities=15% Similarity=0.189 Sum_probs=197.2
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
...|++.+.||+|+ | +||+|+++.+|..||||+++..... ..+.+.+|+++|++|+||||++++++++++
T Consensus 11 ~d~Y~i~~~iG~G~fg--~Vy~~~~~~~~~~vAvK~i~~~~~~--~~~~~~~E~~il~~l~HpnIv~l~~~~~~~----- 81 (288)
T d2jfla1 11 EDFWEIIGELGDGAFG--KVYKAQNKETSVLAAAKVIDTKSEE--ELEDYMVEIDILASCDHPNIVKLLDAFYYE----- 81 (288)
T ss_dssp GGTEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEECSSSG--GGGGTHHHHHHHHHCCCTTBCCEEEEEEET-----
T ss_pred ccCeEEeEEEeeCCCc--EEEEEEECCCCeEEEEEEECcCCHH--HHHHHHHHHHHHHhCCCCCCCeEEEEEeeC-----
Confidence 34599999999998 8 9999999999999999999865333 355688999999999999999999999874
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+||||||| ++|.+++.+.... .....+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+|||
T Consensus 82 ---~~~~lvmEy~~~g~L~~~~~~~~~~--l~e~~~~~i~~qi~~gL~ylH~-~~ivHrDiKp~NIll~~~~~~Kl~DFG 155 (288)
T d2jfla1 82 ---NNLWILIEFCAGGAVDAVMLELERP--LTESQIQVVCKQTLDALNYLHD-NKIIHRDLKAGNILFTLDGDIKLADFG 155 (288)
T ss_dssp ---TEEEEEEECCTTEEHHHHHHHHTSC--CCHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred ---CeEEEEEecCCCCcHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHH-CCEEEeecChhheeECCCCCEEEEech
Confidence 4899999999 5798887764321 2344466779999999999997 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh--------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------- 246 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-------- 246 (771)
++....... .......++..|+|||++..... ....++.++|||||||++|||++|.+||.....
T Consensus 156 ~a~~~~~~~------~~~~~~~Gt~~y~APE~l~~~~~-~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~ 228 (288)
T d2jfla1 156 VSAKNTRTI------QRRDSFIGTPYWMAPEVVMCETS-KDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIA 228 (288)
T ss_dssp TCEECHHHH------HHHTCCCSCCTTCCHHHHTTCST-TTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHH
T ss_pred hhhccCCCc------ccccccccccccCCHHHHhhccc-CCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHH
Confidence 987553210 00112344568999999854211 114567899999999999999999999854221
Q ss_pred -------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 247 -------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 247 -------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
.....++..+.+++.+||+.||.+|||+.++++| +||+.
T Consensus 229 ~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~h-p~~~~ 274 (288)
T d2jfla1 229 KSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQH-PFVTV 274 (288)
T ss_dssp HSCCCCCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTS-GGGCC
T ss_pred cCCCCCCCccccCCHHHHHHHHHHccCChhHCcCHHHHhcC-cccCC
Confidence 1113567789999999999999999999999999 56643
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4e-42 Score=364.50 Aligned_cols=237 Identities=14% Similarity=0.227 Sum_probs=192.2
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
.+|++++.||+|+ | +||+|+++.+|+.||||++.+... .+...+.+.+|+++|++|+||||++++++++++
T Consensus 8 ~dy~i~~~lG~G~fg--~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~----- 80 (288)
T d1uu3a_ 8 EDFKFGKILGEGSFS--TVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDD----- 80 (288)
T ss_dssp GGEEEEEEEEECSSC--EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECS-----
T ss_pred CCCEEEEEEeeCCCe--EEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEEC-----
Confidence 3599999999999 9 999999999999999999985422 223456789999999999999999999999874
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
+.+||||||| ++|.+++...+.. ....+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+|||
T Consensus 81 ---~~~~ivmEy~~gg~L~~~~~~~~~l---~e~~~~~~~~qi~~al~ylH~-~~iiHrDiKp~NIll~~~~~vkl~DFG 153 (288)
T d1uu3a_ 81 ---EKLYFGLSYAKNGELLKYIRKIGSF---DETCTRFYTAEIVSALEYLHG-KGIIHRDLKPENILLNEDMHIQITDFG 153 (288)
T ss_dssp ---SEEEEEECCCTTEEHHHHHHHHSSC---CHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEECTTSCEEECCCT
T ss_pred ---CEEEEEEEccCCCCHHHhhhccCCC---CHHHHHHHHHHHHHHHHhhcc-ccEEcCcCCccccccCCCceEEecccc
Confidence 4899999999 5799988876543 344466679999999999997 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------- 247 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------- 247 (771)
+++.+...... .......++..|+|||++.+ ..++.++|||||||++|||++|..||...+..
T Consensus 154 ~a~~~~~~~~~----~~~~~~~GT~~Y~APE~~~~------~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~ 223 (288)
T d1uu3a_ 154 TAKVLSPESKQ----ARANSFVGTAQYVSPELLTE------KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 223 (288)
T ss_dssp TCEECC--------------CCCCGGGCCHHHHHT------CCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred cceecccCCcc----cccccccCCccccCceeecc------CCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHH
Confidence 99876542211 11122344568999999876 46788999999999999999999998643211
Q ss_pred -----ccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 248 -----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 248 -----~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
....+++.+.+++.+||..||.+|||++++++
T Consensus 224 ~~~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~ 260 (288)
T d1uu3a_ 224 KLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEG 260 (288)
T ss_dssp TTCCCCCTTCCHHHHHHHHTTSCSSGGGSTTSGGGTC
T ss_pred cCCCCCCccCCHHHHHHHHHHccCCHhHCcCHHHHcC
Confidence 11356778899999999999999999998643
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.6e-41 Score=363.21 Aligned_cols=238 Identities=18% Similarity=0.236 Sum_probs=183.4
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
..|++++.||.|+ | +||+|+++.+|+.||||++.+..... ....+.+|+++|++|+||||++++++++++
T Consensus 9 d~Y~~~~~lG~G~fg--~Vy~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~------ 79 (307)
T d1a06a_ 9 DIYDFRDVLGTGAFS--EVILAEDKRTQKLVAIKCIAKKALEG-KEGSMENEIAVLHKIKHPNIVALDDIYESG------ 79 (307)
T ss_dssp GTEEEEEESBSGGGG--GEEEEEETTTCCEEEEEEEEC-----------CHHHHHHHTCCCTTBCCEEEEEECS------
T ss_pred cceEEEEEEeeccCe--EEEEEEECCCCCEEEEEEEchHHhhh-HHHHHHHHHHHHHhCCCCCCCcEEEEEEEC------
Confidence 3599999999999 9 99999999999999999998754332 345678999999999999999999999874
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEc---CCCcEEEEc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT---QTLDWKLHA 172 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~---~~G~~KL~d 172 (771)
..+||||||| ++|.++|...+. .....+..++.||+.||.|||+ .+++||||||+||++. .+|.+||+|
T Consensus 80 --~~~~lvmE~~~gg~L~~~l~~~~~---l~e~~~~~~~~qi~~al~ylH~-~~iiHrDiKp~Nil~~~~~~~~~vkl~D 153 (307)
T d1a06a_ 80 --GHLYLIMQLVSGGELFDRIVEKGF---YTERDASRLIFQVLDAVKYLHD-LGIVHRDLKPENLLYYSLDEDSKIMISD 153 (307)
T ss_dssp --SEEEEEECCCCSCBHHHHHHTCSC---CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEESSSSTTCCEEECC
T ss_pred --CEEEEEEeccCCCcHHHhhhcccC---CCHHHHHHHHHHHHHHHHhhhh-ceeeeEEecccceeecccCCCceEEEec
Confidence 4899999999 589999987543 2344566779999999999997 8999999999999995 578999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-----
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----- 247 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~----- 247 (771)
||++........ .....++..|+|||++.+ ..++.++|||||||++|||++|.+||......
T Consensus 154 FG~a~~~~~~~~-------~~~~~GT~~y~APE~~~~------~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~ 220 (307)
T d1a06a_ 154 FGLSKMEDPGSV-------LSTACGTPGYVAPEVLAQ------KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQ 220 (307)
T ss_dssp C-------------------------CTTSCHHHHTT------CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred cceeEEccCCCe-------eeeeeeCccccCcHHHcC------CCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 999976543211 122345669999999876 46788999999999999999999998643211
Q ss_pred -----------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 -----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 -----------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
....+|+.+.+++.+||..||.+|||+.++++| +||+
T Consensus 221 i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h-p~~~ 268 (307)
T d1a06a_ 221 ILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQH-PWIA 268 (307)
T ss_dssp HHTTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS-TTTT
T ss_pred HhccCCCCCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcC-HhhC
Confidence 113577889999999999999999999999999 5564
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-41 Score=358.84 Aligned_cols=241 Identities=17% Similarity=0.214 Sum_probs=199.6
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch----hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD----GHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~----~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~ 92 (771)
...|++++.||.|+ | +||+|+++.+|+.||||++.+..... ...+.+++|+++|++|+||||++++++++++
T Consensus 9 ~d~Y~~~~~lG~G~fg--~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~- 85 (293)
T d1jksa_ 9 DDYYDTGEELGSGQFA--VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENK- 85 (293)
T ss_dssp GGTEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS-
T ss_pred ccCEEEeEEEecCCCe--EEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC-
Confidence 34699999999998 8 99999999999999999998653322 2467889999999999999999999999874
Q ss_pred cCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC----
Q 004157 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL---- 166 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G---- 166 (771)
.++||||||| ++|.++|...... ....+..++.||+.||+|||+ .+++||||||+||+++.+|
T Consensus 86 -------~~~~iv~E~~~gg~L~~~i~~~~~l---~~~~~~~~~~qi~~al~yLH~-~~ivHrDiKp~Nill~~~~~~~~ 154 (293)
T d1jksa_ 86 -------TDVILILELVAGGELFDFLAEKESL---TEEEATEFLKQILNGVYYLHS-LQIAHFDLKPENIMLLDRNVPKP 154 (293)
T ss_dssp -------SEEEEEEECCCSCBHHHHHHHHSSC---CHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEESCSSSSSC
T ss_pred -------CEEEEEEEcCCCccccchhcccccc---chhHHHHHHHHHHHHHHhhhh-cceeecccccceEEEecCCCccc
Confidence 4899999999 5899999876532 344566779999999999997 8999999999999999877
Q ss_pred cEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh
Q 004157 167 DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL 246 (771)
Q Consensus 167 ~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l 246 (771)
.+||+|||++........ .....++..|+|||++.+ ..++.++|+|||||++|||++|..||.....
T Consensus 155 ~vkl~DfG~a~~~~~~~~-------~~~~~~t~~y~APE~~~~------~~~~~~~DiwSlGvilyell~g~~Pf~~~~~ 221 (293)
T d1jksa_ 155 RIKIIDFGLAHKIDFGNE-------FKNIFGTPEFVAPEIVNY------EPLGLEADMWSIGVITYILLSGASPFLGDTK 221 (293)
T ss_dssp CEEECCCTTCEECTTSCB-------CSCCCCCGGGCCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred ceEecchhhhhhcCCCcc-------ccccCCCCcccCHHHHcC------CCCCCcccchhhhHHHHHHHcCCCCCCCCCH
Confidence 499999999987754321 112234558999999986 3677899999999999999999999864321
Q ss_pred h----------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 247 R----------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 247 ~----------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
. ....+|..+.+++++||+.||.+||+++++++| +||+.
T Consensus 222 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h-p~~~~ 276 (293)
T d1jksa_ 222 QETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH-PWIKP 276 (293)
T ss_dssp HHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS-TTTCC
T ss_pred HHHHHHHHhcCCCCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhcC-cccCC
Confidence 1 114577889999999999999999999999998 56654
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.8e-41 Score=361.49 Aligned_cols=237 Identities=15% Similarity=0.128 Sum_probs=193.2
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.|++.++||.|+ | +||+|+++.+|+.||||++.+.... ....+.+.+|+++|++|+||||+++++++.++
T Consensus 16 ~y~~l~~lG~G~fg--~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~------ 87 (309)
T d1u5ra_ 16 LFSDLREIGHGSFG--AVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE------ 87 (309)
T ss_dssp HEEEEEEEEECSSS--EEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEET------
T ss_pred hcEeeEEEecCCCe--EEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEEC------
Confidence 499999999999 9 9999999999999999999876543 34567789999999999999999999999874
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
.++||||||| +.|..++..... .....+..++.||+.||.|||+ .||+||||||+|||++.+|.+||+|||+
T Consensus 88 --~~~~iv~E~~~~g~l~~~~~~~~~---l~e~~~~~i~~qi~~aL~yLH~-~~iiHrDiKp~NILl~~~~~~Kl~DFG~ 161 (309)
T d1u5ra_ 88 --HTAWLVMEYCLGSASDLLEVHKKP---LQEVEIAAVTHGALQGLAYLHS-HNMIHRDVKAGNILLSEPGLVKLGDFGS 161 (309)
T ss_dssp --TEEEEEEECCSEEHHHHHHHHTSC---CCHHHHHHHHHHHHHHHHHHHH-TTCBCCCCSGGGEEEETTTEEEECCCTT
T ss_pred --CEEEEEEEecCCCchHHHHHhCCC---CCHHHHHHHHHHHHHHHHHHHh-CCEeccCCCcceEEECCCCCEEEeeccc
Confidence 4899999999 346555554432 2344466679999999999997 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh--------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~-------- 247 (771)
+...... ....++..|+|||++.+.. ...++.++|||||||++|||++|..||......
T Consensus 162 a~~~~~~----------~~~~GT~~Y~APE~~~~~~---~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~ 228 (309)
T d1u5ra_ 162 ASIMAPA----------NSFVGTPYWMAPEVILAMD---EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ 228 (309)
T ss_dssp CBSSSSB----------CCCCSCGGGCCHHHHTTTT---SCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH
T ss_pred ccccCCC----------CccccCccccCHHHHhccC---CCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence 9865432 1224456899999986421 134678999999999999999999988542210
Q ss_pred ------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 248 ------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 248 ------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
....+|..+.+++.+||..||.+|||++++|+|+ ||
T Consensus 229 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~Hp-~~ 270 (309)
T d1u5ra_ 229 NESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR-FV 270 (309)
T ss_dssp SCCCCCSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCH-HH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHCcCChhHCcCHHHHHhCH-Hh
Confidence 1134677899999999999999999999999984 44
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=6.9e-41 Score=359.65 Aligned_cols=238 Identities=15% Similarity=0.204 Sum_probs=197.1
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.|++++.||.|+ | +||+|+++.+|+.||||++.+... .....+.+.+|+++|++++||||++++++++++
T Consensus 5 dy~i~~~lG~G~fg--~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~------ 76 (316)
T d1fota_ 5 DFQILRTLGTGSFG--RVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDA------ 76 (316)
T ss_dssp GEEEEEEEEECSSC--EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECS------
T ss_pred HeEEEEEEecCcCc--EEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeC------
Confidence 599999999998 8 999999999999999999975422 123456788999999999999999999999874
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+|+||||| +.|..++...... ....++.++.||+.||.|||+ .+|+||||||+||+++.+|.+||+|||+
T Consensus 77 --~~~~ivmE~~~gg~l~~~~~~~~~~---~~~~~~~~~~qi~~al~~lH~-~~iiHrDiKp~NILl~~~g~vkL~DFG~ 150 (316)
T d1fota_ 77 --QQIFMIMDYIEGGELFSLLRKSQRF---PNPVAKFYAAEVCLALEYLHS-KDIIYRDLKPENILLDKNGHIKITDFGF 150 (316)
T ss_dssp --SEEEEEECCCCSCBHHHHHHHTSSC---CHHHHHHHHHHHHHHHHHHHT-TTEECCCCCGGGEEECTTSCEEECCCSS
T ss_pred --CeeeeEeeecCCccccccccccccc---cccHHHHHHHHHHHhhhhhcc-CcEEccccCchheeEcCCCCEEEecCcc
Confidence 4899999999 4688877776543 233455668999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh--------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~-------- 247 (771)
++..... .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 151 a~~~~~~---------~~~~~Gt~~Y~APE~l~~------~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~ 215 (316)
T d1fota_ 151 AKYVPDV---------TYTLCGTPDYIAPEVVST------KPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILN 215 (316)
T ss_dssp CEECSSC---------BCCCCSCTTTCCHHHHTT------CCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH
T ss_pred ceEeccc---------cccccCcccccCHHHHcC------CCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHc
Confidence 9876542 112345568999999876 46778999999999999999999998643211
Q ss_pred ----ccCCCCcchHHHHHHHhccCCCCCC-----ChHHHhhCCCCCcch
Q 004157 248 ----NTASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENSEYFQNK 287 (771)
Q Consensus 248 ----~~~~IP~~l~~~i~~lL~~~P~~Rp-----s~~~lL~~~~fF~n~ 287 (771)
....+|+.+.+++.+||..+|.+|+ +++++++| +||++.
T Consensus 216 ~~~~~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~H-p~f~~i 263 (316)
T d1fota_ 216 AELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH-PWFKEV 263 (316)
T ss_dssp CCCCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS-GGGSSC
T ss_pred CCCCCCCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcC-cccccC
Confidence 1245677899999999999999996 89999998 677663
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=7.8e-41 Score=364.13 Aligned_cols=237 Identities=18% Similarity=0.272 Sum_probs=196.5
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++++.||.|+ | +||+|+++.+|+.||||++.+.. ....+.+++|+++|++|+||||++++++++++
T Consensus 27 ~Y~i~~~lG~G~fg--~Vy~~~~~~~g~~vAvK~i~~~~--~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~------- 95 (350)
T d1koaa2 27 HYDIHEELGTGAFG--VVHRVTERATGNNFAAKFVMTPH--ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDD------- 95 (350)
T ss_dssp TEEEEEEEEEETTE--EEEEEEETTTTEEEEEEEECCCS--HHHHHHHHHHHHHHHHTCCTTBCCEEEEEEET-------
T ss_pred CeEEEEEEecCcCe--EEEEEEECCCCCEEEEEEEcccc--hhhHHHHHHHHHHHHhCCCCCCCcEEEEEEEC-------
Confidence 699999999999 8 99999999999999999997643 33457789999999999999999999999874
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC--CCcEEEEccC
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ--TLDWKLHAFD 174 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~--~G~~KL~dFg 174 (771)
..+||||||| ++|.++|..... ......+..++.||+.||.|||+ .++|||||||+||+++. +|.+||+|||
T Consensus 96 -~~~~ivmE~~~gg~L~~~l~~~~~--~l~e~~~~~i~~qi~~aL~ylH~-~~iiHrDiKp~NIll~~~~~~~vkL~DFG 171 (350)
T d1koaa2 96 -NEMVMIYEFMSGGELFEKVADEHN--KMSEDEAVEYMRQVCKGLCHMHE-NNYVHLDLKPENIMFTTKRSNELKLIDFG 171 (350)
T ss_dssp -TEEEEEECCCCSCBHHHHHTCTTS--CBCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEESSTTSCCEEECCCT
T ss_pred -CEEEEEEEcCCCCCHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHh-cCCeeeeechhHeeeccCCCCeEEEeecc
Confidence 4899999999 589998854321 13345567779999999999997 99999999999999964 6889999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h---
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R--- 247 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~--- 247 (771)
+++...... ......++..|+|||++.+ ..++.++|||||||++|+|++|..||..... .
T Consensus 172 ~a~~~~~~~-------~~~~~~gT~~Y~aPEv~~~------~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~ 238 (350)
T d1koaa2 172 LTAHLDPKQ-------SVKVTTGTAEFAAPEVAEG------KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVK 238 (350)
T ss_dssp TCEECCTTS-------CEEEECSCTTTCCHHHHHT------CCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred hheeccccc-------ccceecCcccccCHHHHcC------CCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 998775421 1223345669999999876 4667899999999999999999999864321 1
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 ---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 ---------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
....+++.+.+++.+||..||.+|||++++|+| +||+
T Consensus 239 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h-p~~~ 284 (350)
T d1koaa2 239 SCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH-PWLT 284 (350)
T ss_dssp HTCCCSCCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHS-TTTS
T ss_pred hCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC-cccC
Confidence 113577889999999999999999999999999 4554
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.3e-41 Score=361.93 Aligned_cols=241 Identities=16% Similarity=0.205 Sum_probs=199.9
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
..|++++.||.|+ | +||+|+++.+|+.||||++.++... ....+.+.+|+++|++++||||++++++++++
T Consensus 5 ~dy~~~~~lG~G~fg--~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~----- 77 (337)
T d1o6la_ 5 NDFDYLKLLGKGTFG--KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH----- 77 (337)
T ss_dssp GGEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECS-----
T ss_pred HhcEEEEEEecCcCe--EEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccc-----
Confidence 3599999999998 8 9999999999999999999864221 23456788999999999999999999999974
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
.++||||||| ++|..++...... .+..++.++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 78 ---~~~~iv~ey~~gg~L~~~~~~~~~~---~e~~~~~~~~qil~al~ylH~-~~iiHRDlKP~NILl~~~g~vkl~DFG 150 (337)
T d1o6la_ 78 ---DRLCFVMEYANGGELFFHLSRERVF---TEERARFYGAEIVSALEYLHS-RDVVYRDIKLENLMLDKDGHIKITDFG 150 (337)
T ss_dssp ---SEEEEEEECCTTCBHHHHHHHHSCC---CHHHHHHHHHHHHHHHHHHHH-TTCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred ---cccccceeccCCCchhhhhhcccCC---cHHHHHHHHHHHhhhhhhhhh-cCccccccCHHHeEecCCCCEEEeecc
Confidence 4899999999 5799999886543 234566779999999999997 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------- 247 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------- 247 (771)
+++....... ......++..|+|||++.+ ..++.++|+|||||++|||++|.+||...+..
T Consensus 151 ~a~~~~~~~~------~~~~~~GT~~Y~aPE~~~~------~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~ 218 (337)
T d1o6la_ 151 LCKEGISDGA------TMKTFCGTPEYLAPEVLED------NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 218 (337)
T ss_dssp TCBCSCCTTC------CBCCCEECGGGCCGGGGSS------SCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred cccccccCCc------ccccceeCHHHhhhhhccC------CCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHh
Confidence 9987644221 1223345568999999987 46788999999999999999999988654321
Q ss_pred -----ccCCCCcchHHHHHHHhccCCCCCCC-----hHHHhhCCCCCcc
Q 004157 248 -----NTASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENSEYFQN 286 (771)
Q Consensus 248 -----~~~~IP~~l~~~i~~lL~~~P~~Rps-----~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||..||.+|++ +.++++| +||++
T Consensus 219 ~~~~~~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~H-p~f~~ 266 (337)
T d1o6la_ 219 MEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH-RFFLS 266 (337)
T ss_dssp HCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS-GGGTT
T ss_pred cCCCCCCccCCHHHHHHHHhhccCCchhhcccccccHHHHHcC-ccccc
Confidence 12457778999999999999999995 8899998 66754
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=1e-40 Score=363.52 Aligned_cols=238 Identities=16% Similarity=0.235 Sum_probs=197.0
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|++.+.||.|+ | +||+|+++.+|+.||||++.+... .....+++|+++|++|+||||++++++++++
T Consensus 30 ~Y~i~~~lG~G~fg--~V~~a~~~~~~~~vAiK~i~~~~~--~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~------- 98 (352)
T d1koba_ 30 YYDILEELGSGAFG--VVHRCVEKATGRVFVAKFINTPYP--LDKYTVKNEISIMNQLHHPKLINLHDAFEDK------- 98 (352)
T ss_dssp TEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEECCSH--HHHHHHHHHHHHHTTCCSTTBCCEEEEEECS-------
T ss_pred ceEEEEEEecCCCe--EEEEEEECCCCCEEEEEEECCcch--hHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC-------
Confidence 599999999998 8 999999999999999999986533 2356788999999999999999999999864
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEc--CCCcEEEEccC
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT--QTLDWKLHAFD 174 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~--~~G~~KL~dFg 174 (771)
.++||||||| ++|.+.+..... ......+..+++||+.||.|||+ +||+||||||+||+++ .+|.+||+|||
T Consensus 99 -~~~~ivmE~~~gg~L~~~~~~~~~--~l~e~~~~~i~~qi~~aL~ylH~-~~iiHRDiKp~NILl~~~~~~~vkL~DFG 174 (352)
T d1koba_ 99 -YEMVLILEFLSGGELFDRIAAEDY--KMSEAEVINYMRQACEGLKHMHE-HSIVHLDIKPENIMCETKKASSVKIIDFG 174 (352)
T ss_dssp -SEEEEEEECCCCCBHHHHTTCTTC--CBCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEESSTTCCCEEECCCT
T ss_pred -CEEEEEEEcCCCChHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH-CCeeecccccccccccccCCCeEEEeecc
Confidence 4899999999 579887755431 12345567779999999999996 9999999999999998 67899999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------- 247 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------- 247 (771)
++....... ......++..|+|||++.+ ..++.++|||||||++|+|++|.+||......
T Consensus 175 la~~~~~~~-------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~ 241 (352)
T d1koba_ 175 LATKLNPDE-------IVKVTTATAEFAAPEIVDR------EPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVK 241 (352)
T ss_dssp TCEECCTTS-------CEEEECSSGGGCCHHHHTT------CCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHH
T ss_pred cceecCCCC-------ceeeccCcccccCHHHHcC------CCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 998876421 1222344568999999876 46778999999999999999999998643211
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 ---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 ---------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....+++.+.+++.+||..||.+|||+.++|+| +||+.
T Consensus 242 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~H-p~~~~ 288 (352)
T d1koba_ 242 RCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH-PWLKG 288 (352)
T ss_dssp HCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS-TTTSS
T ss_pred hCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC-HhhCC
Confidence 113577889999999999999999999999999 56654
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=1.6e-40 Score=350.32 Aligned_cols=245 Identities=16% Similarity=0.201 Sum_probs=201.6
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-------hHHHHHHHHHHHHhcCC-CCCeeEEeeeEE
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-------GHLAAARNGVKRLRTVR-HPNILAFLHSTE 89 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-------~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e 89 (771)
-+|++.+.||.|+ | +||+|+++.+|+.||||++.+..... ...+.+.+|+++|++|+ ||||++++++++
T Consensus 3 ~~y~~~~~iG~G~~g--~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 80 (277)
T d1phka_ 3 ENYEPKEILGRGVSS--VVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 80 (277)
T ss_dssp TTEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred ccCEEceEEecCcCe--EEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecc
Confidence 4799999999998 8 99999999999999999998764321 23456889999999998 999999999998
Q ss_pred ecccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCc
Q 004157 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD 167 (771)
Q Consensus 90 ~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~ 167 (771)
++ .++||||||| ++|.++|+..... ....+..++.||+.||+|||+ ++++||||||+||+|+.+|.
T Consensus 81 ~~--------~~~~ivmE~~~~g~L~~~l~~~~~l---~e~~~~~~~~qi~~al~~lH~-~~ivHrDlkp~Nill~~~~~ 148 (277)
T d1phka_ 81 TN--------TFFFLVFDLMKKGELFDYLTEKVTL---SEKETRKIMRALLEVICALHK-LNIVHRDLKPENILLDDDMN 148 (277)
T ss_dssp CS--------SEEEEEEECCTTCBHHHHHHHHSSC---CHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEECTTCC
T ss_pred cC--------cceEEEEEcCCCchHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHH-cCCcccccccceEEEcCCCC
Confidence 63 4899999999 5899999876543 344566679999999999996 89999999999999999999
Q ss_pred EEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh
Q 004157 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR 247 (771)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~ 247 (771)
+||+|||++........ .....++..|+|||++.+.-......++.++|+|||||++|+|++|..||......
T Consensus 149 ~kl~DFG~a~~~~~~~~-------~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~ 221 (277)
T d1phka_ 149 IKLTDFGFSCQLDPGEK-------LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM 221 (277)
T ss_dssp EEECCCTTCEECCTTCC-------BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred eEEccchheeEccCCCc-------eeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHH
Confidence 99999999987754211 12234456899999987643333345678999999999999999999998653211
Q ss_pred ----------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 ----------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 ----------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
...++++.+.+++.+||+.+|.+||+++++++| +||+
T Consensus 222 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h-~~~~ 274 (277)
T d1phka_ 222 LMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH-PFFQ 274 (277)
T ss_dssp HHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS-GGGC
T ss_pred HHHHHHHhCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC-HHHH
Confidence 113577889999999999999999999999999 5554
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-40 Score=351.28 Aligned_cols=243 Identities=18% Similarity=0.269 Sum_probs=193.2
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.||.|+ | +||+|+++.+|+.||||++......+...+.+.+|+++|++|+||||+++++++++.
T Consensus 3 ~Y~~~~~lG~G~fg--~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~------- 73 (298)
T d1gz8a_ 3 NFQKVEKIGEGTYG--VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE------- 73 (298)
T ss_dssp TEEEEEEEEECSSS--EEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEET-------
T ss_pred CCEeccEEecCcCe--EEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccc-------
Confidence 699999999999 9 999999999999999999976544444456788999999999999999999999874
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
.++||||||| +.+..++....... .....+..++.||+.||.|||+ .+||||||||+||+++.++.+||+|||++.
T Consensus 74 -~~~~iv~e~~~~~~~~~~~~~~~~~-l~e~~~~~~~~qil~~L~yLH~-~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~ 150 (298)
T d1gz8a_ 74 -NKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHS-HRVLHRDLKPQNLLINTEGAIKLADFGLAR 150 (298)
T ss_dssp -TEEEEEEECCSEEHHHHHHHTTTTC-CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEECTTSCEEECSTTHHH
T ss_pred -cceeEEEeecCCchhhhhhhhcccC-CCHHHHHHHHHHHHHHHHHhhc-CCEEccccCchheeecccCcceeccCCcce
Confidence 4899999999 56666665543222 2345567779999999999997 899999999999999999999999999998
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R------ 247 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~------ 247 (771)
........ .....++..|+|||+.... ..++.++|+|||||++|+|++|..||..... .
T Consensus 151 ~~~~~~~~------~~~~~gt~~y~apE~~~~~-----~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~ 219 (298)
T d1gz8a_ 151 AFGVPVRT------YTHEVVTLWYRAPEILLGC-----KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 219 (298)
T ss_dssp HHCCCSBC------TTCCBCCCTTCCHHHHTTC-----SSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred eccCCccc------ceeecccceeeehhhhccc-----cCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhc
Confidence 76542211 1223455699999987653 3457899999999999999999998853210 0
Q ss_pred -------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 -------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 -------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....+++.+.+++++||..||.+|||+.++++| +||++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H-~ff~~ 288 (298)
T d1gz8a_ 220 GTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH-PFFQD 288 (298)
T ss_dssp CCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS-GGGTT
T ss_pred CCCchhhccccccccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCC-Hhhcc
Confidence 012345668899999999999999999999999 56654
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.6e-40 Score=361.69 Aligned_cols=238 Identities=16% Similarity=0.223 Sum_probs=199.0
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
.+|++.+.||.|+ | +||+|+++.+|+.||||++.+.... ....+.+.+|+++|+.++||||++++++++..
T Consensus 41 d~y~i~~~lG~G~fg--~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~----- 113 (350)
T d1rdqe_ 41 DQFDRIKTLGTGSFG--RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN----- 113 (350)
T ss_dssp GGEEEEEEEEECSSC--EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS-----
T ss_pred cCeEEEEEeecCcCc--EEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccc-----
Confidence 3699999999999 9 9999999999999999999853221 23456788999999999999999999999874
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+|+||||+ ++|..++...+.. ....++.++.||+.||.|||+ .+||||||||+||+++.+|.+||+|||
T Consensus 114 ---~~~~~v~e~~~~g~l~~~l~~~~~l---~e~~~~~i~~qi~~aL~yLH~-~~iiHRDIKP~NILl~~~g~ikL~DFG 186 (350)
T d1rdqe_ 114 ---SNLYMVMEYVAGGEMFSHLRRIGRF---SEPHARFYAAQIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFG 186 (350)
T ss_dssp ---SEEEEEEECCTTCBHHHHHHHHCCC---CHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred ---cccccccccccccchhhhHhhcCCC---CHHHHHHHHHHHHHHHHHHHh-CCEecCcCCHHHcccCCCCCEEeeece
Confidence 4899999999 5788888776532 344566779999999999997 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh--------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------- 246 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-------- 246 (771)
+++..... .....++..|+|||++.+ ..++.++|+|||||++|||++|.+||.....
T Consensus 187 ~a~~~~~~---------~~~~~Gt~~Y~APE~~~~------~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~ 251 (350)
T d1rdqe_ 187 FAKRVKGR---------TWTLCGTPEALAPEIILS------KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251 (350)
T ss_dssp TCEECSSC---------BCCCEECGGGCCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred eeeecccc---------cccccCccccCCHHHHcC------CCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHh
Confidence 99877542 112244558999999986 4677899999999999999999999865331
Q ss_pred ----hccCCCCcchHHHHHHHhccCCCCCC-----ChHHHhhCCCCCcc
Q 004157 247 ----RNTASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENSEYFQN 286 (771)
Q Consensus 247 ----~~~~~IP~~l~~~i~~lL~~~P~~Rp-----s~~~lL~~~~fF~n 286 (771)
.....+++.+.+++++||..||.+|+ +++++++| +||++
T Consensus 252 ~~~~~~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~H-p~f~~ 299 (350)
T d1rdqe_ 252 SGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH-KWFAT 299 (350)
T ss_dssp HCCCCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS-GGGTT
T ss_pred cCCCCCCccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcC-ccccC
Confidence 11246788899999999999999995 89999998 67765
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=5.3e-40 Score=359.46 Aligned_cols=240 Identities=14% Similarity=0.190 Sum_probs=194.8
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc----hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ----DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~----~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
.+|++.+.||.|+ | +||+|+++.+|+.||||++.+.... ........+++++++.++||||++++++++++
T Consensus 4 ddy~i~~~lG~G~fg--~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~-- 79 (364)
T d1omwa3 4 NDFSVHRIIGRGGFG--EVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTP-- 79 (364)
T ss_dssp TTEEEEEEEEECSSC--EEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECS--
T ss_pred HhCeeeeEEecCCCe--EEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEEC--
Confidence 4699999999999 9 9999999999999999999753211 11222334557888888999999999999874
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEE
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~ 171 (771)
..+||||||| ++|.++|.+.... ....+..++.||+.||.|||+ .++|||||||+||+++.+|.+||+
T Consensus 80 ------~~~~ivmE~~~gg~L~~~l~~~~~~---~e~~~~~~~~qi~~aL~ylH~-~~iiHrDlKP~NILl~~~g~iKl~ 149 (364)
T d1omwa3 80 ------DKLSFILDLMNGGDLHYHLSQHGVF---SEADMRFYAAEIILGLEHMHN-RFVVYRDLKPANILLDEHGHVRIS 149 (364)
T ss_dssp ------SEEEEEECCCCSCBHHHHHHHHCSC---CHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEECSSSCEEEC
T ss_pred ------CEEEEEEEecCCCcHHHHHHhcccc---cHHHHHHHHHHHHHHHHHHHH-CCccceeeccceeEEcCCCcEEEe
Confidence 4899999999 5799999876543 234466779999999999997 999999999999999999999999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-----
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----- 246 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----- 246 (771)
|||+++...... .....++..|+|||++..+ ..++.++|+|||||++|||++|..||.....
T Consensus 150 DFGla~~~~~~~--------~~~~~GT~~y~APE~~~~~-----~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~ 216 (364)
T d1omwa3 150 DLGLACDFSKKK--------PHASVGTHGYMAPEVLQKG-----VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE 216 (364)
T ss_dssp CCTTCEECSSSC--------CCSCCSCGGGCCHHHHSTT-----CCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHH
T ss_pred eeceeeecCCCc--------ccccccccccchhHHhhcC-----CCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 999998765421 1123455699999998653 4577899999999999999999999854221
Q ss_pred --h--------ccCCCCcchHHHHHHHhccCCCCCCC-----hHHHhhCCCCCcc
Q 004157 247 --R--------NTASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENSEYFQN 286 (771)
Q Consensus 247 --~--------~~~~IP~~l~~~i~~lL~~~P~~Rps-----~~~lL~~~~fF~n 286 (771)
+ ....+++.+.+++.+||..||.+||+ ++++++| +||++
T Consensus 217 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~H-p~f~~ 270 (364)
T d1omwa3 217 IDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES-PFFRS 270 (364)
T ss_dssp HHHHSSSCCCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTS-GGGTT
T ss_pred HHHhcccCCCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcC-ccccC
Confidence 0 11357788999999999999999999 6899998 67765
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-40 Score=351.75 Aligned_cols=238 Identities=20% Similarity=0.271 Sum_probs=183.6
Q ss_pred cCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch---hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcc
Q 004157 24 GDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD---GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (771)
Q Consensus 24 ~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~---~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~ 99 (771)
.+.||.|+ | +||+|+++.+|+.||||++....... ...+.+.+|+++|++++||||++++++++.+
T Consensus 3 l~~lG~G~fg--~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~-------- 72 (299)
T d1ua2a_ 3 LDFLGEGQFA--TVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHK-------- 72 (299)
T ss_dssp EEEEEEETTE--EEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCT--------
T ss_pred ceEeccCcCe--EEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccC--------
Confidence 46789998 8 99999999999999999997643222 2345688999999999999999999999874
Q ss_pred cEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccc
Q 004157 100 ITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (771)
Q Consensus 100 ~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~ 178 (771)
.++||||||| +.+...+...... .....+..+++||+.||+|||+ .+++||||||+||+++.+|.+||+|||++..
T Consensus 73 ~~~~ivmE~~~~~~~~~~~~~~~~--l~~~~~~~~~~qil~aL~~lH~-~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~ 149 (299)
T d1ua2a_ 73 SNISLVFDFMETDLEVIIKDNSLV--LTPSHIKAYMLMTLQGLEYLHQ-HWILHRDLKPNNLLLDENGVLKLADFGLAKS 149 (299)
T ss_dssp TCCEEEEECCSEEHHHHHTTCCSS--CCSSHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEECTTCCEEECCCGGGST
T ss_pred CceeehhhhhcchHHhhhhhcccC--CCHHHHHHHHHHHHHHHHHhhc-cceecccCCcceEEecCCCccccccCccccc
Confidence 3799999999 4444444332211 1223356679999999999997 9999999999999999999999999999987
Q ss_pred cCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----hh-------
Q 004157 179 FDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LR------- 247 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----l~------- 247 (771)
....... .....++..|+|||++... ..++.++|||||||++|||++|.+||.... +.
T Consensus 150 ~~~~~~~------~~~~~gt~~y~aPE~~~~~-----~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~ 218 (299)
T d1ua2a_ 150 FGSPNRA------YTHQVVTRWYRAPELLFGA-----RMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLG 218 (299)
T ss_dssp TTSCCCC------CCCSCCCCTTCCHHHHTTC-----SCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHC
T ss_pred cCCCccc------ccceecChhhccHHHHccC-----CCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcC
Confidence 6543211 1223456689999998653 456789999999999999999998885321 00
Q ss_pred -----------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 -----------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 -----------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....+++.+.+++.+||..||++|||+.++|+| +||++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~H-p~f~~ 285 (299)
T d1ua2a_ 219 TPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM-KYFSN 285 (299)
T ss_dssp CCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS-GGGTS
T ss_pred CCChhhccchhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCC-HhhCC
Confidence 012456678899999999999999999999998 56654
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-39 Score=351.11 Aligned_cols=237 Identities=17% Similarity=0.235 Sum_probs=194.9
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.+|++++.||.|+ | +||+|+++.+|+.||||++.++.. ....+++|+++|++++||||++++++++++
T Consensus 5 ~rY~i~~~lG~G~fg--~Vy~~~~~~~~~~~AiK~i~~~~~---~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~------ 73 (321)
T d1tkia_ 5 EKYMIAEDLGRGEFG--IVHRCVETSSKKTYMAKFVKVKGT---DQVLVKKEISILNIARHRNILHLHESFESM------ 73 (321)
T ss_dssp TTEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEECCCTH---HHHHHHHHHHHHHHSCCTTBCCEEEEEEET------
T ss_pred cceEEEEEEecCCCe--EEEEEEECCCCcEEEEEEEcCCcc---cHHHHHHHHHHHHhCCCCCCCeEEEEEEEC------
Confidence 4699999999998 8 999999999999999999986532 234678999999999999999999999874
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCC--CcEEEEcc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT--LDWKLHAF 173 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~--G~~KL~dF 173 (771)
.++||||||| ++|.++|...+. ...+..+..++.||+.||+|||+ .+|+||||||+||+++.+ +.+||+||
T Consensus 74 --~~~~lvmE~~~gg~L~~~i~~~~~--~l~e~~~~~i~~qi~~al~yLH~-~~iiHrDlKp~NIll~~~~~~~ikl~DF 148 (321)
T d1tkia_ 74 --EELVMIFEFISGLDIFERINTSAF--ELNEREIVSYVHQVCEALQFLHS-HNIGHFDIRPENIIYQTRRSSTIKIIEF 148 (321)
T ss_dssp --TEEEEEECCCCCCBHHHHHTSSSC--CCCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEESSSSCCCEEECCC
T ss_pred --CEEEEEEecCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH-cCCCcccccccceeecCCCceEEEEccc
Confidence 4899999999 579999976542 12345567779999999999997 899999999999999854 47999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh----c-
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----N- 248 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~----~- 248 (771)
|++....... .......+..|++||...+ ..++.++|+|||||++|+|++|.+||...... .
T Consensus 149 G~~~~~~~~~-------~~~~~~~t~~y~ape~~~~------~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i 215 (321)
T d1tkia_ 149 GQARQLKPGD-------NFRLLFTAPEYYAPEVHQH------DVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENI 215 (321)
T ss_dssp TTCEECCTTC-------EEEEEESCGGGSCHHHHTT------CEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH
T ss_pred chhhccccCC-------cccccccccccccchhccC------CCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 9998765421 1122334568999999876 35678999999999999999999998653211 1
Q ss_pred -----------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 249 -----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 249 -----------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
...+++.+.+++.+||..||.+||++.++++| +||+
T Consensus 216 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~h-p~~~ 262 (321)
T d1tkia_ 216 MNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQH-PWLK 262 (321)
T ss_dssp HHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS-HHHH
T ss_pred HhCCCCCChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhcC-Hhhc
Confidence 13577889999999999999999999999999 4553
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-39 Score=350.36 Aligned_cols=240 Identities=15% Similarity=0.193 Sum_probs=194.7
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHh-cCCCCCeeEEeeeEEecccCcC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLR-TVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk-~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
+|++++.||.|+ | +||+|+++.+|+.||||++.+... .+...+.+.+|..++. .++||||+++++++++.
T Consensus 3 dy~i~~~iG~G~fg--~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~----- 75 (320)
T d1xjda_ 3 DFILHKMLGKGSFG--KVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTK----- 75 (320)
T ss_dssp TEEEEEEEEECSSS--EEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECS-----
T ss_pred CeEEeeEEecCCCc--EEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccC-----
Confidence 599999999999 9 999999999999999999985321 1223445666777665 68999999999999874
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+||||||| ++|.++|...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 76 ---~~~yivmEy~~~g~L~~~i~~~~~~---~e~~~~~~~~qi~~al~ylH~-~~iiHrDikp~NiL~~~~~~~kl~DFG 148 (320)
T d1xjda_ 76 ---ENLFFVMEYLNGGDLMYHIQSCHKF---DLSRATFYAAEIILGLQFLHS-KGIVYRDLKLDNILLDKDGHIKIADFG 148 (320)
T ss_dssp ---SEEEEEEECCTTCBHHHHHHHHSSC---CHHHHHHHHHHHHHHHHHHHH-TTCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred ---CceeEEEeecCCCcHHHHhhccCCC---CHHHHHHHHHHHHHHHHHHHh-CCeeeccCcccceeecCCCceeccccc
Confidence 4899999999 6899999876543 234466779999999999997 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------- 247 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------- 247 (771)
+++....... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 149 ~a~~~~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~ 216 (320)
T d1xjda_ 149 MCKENMLGDA------KTNTFCGTPDYIAPEILLG------QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIR 216 (320)
T ss_dssp TCBCCCCTTC------CBCCCCSCGGGCCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred hhhhcccccc------cccccCCCCCcCCHHHHcC------CCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9986554211 1122344568999999987 46788999999999999999999998643321
Q ss_pred -----ccCCCCcchHHHHHHHhccCCCCCCChH-HHhhCCCCCcc
Q 004157 248 -----NTASIPKSLLPDYQRLLSSMPSRRLNSS-KLIENSEYFQN 286 (771)
Q Consensus 248 -----~~~~IP~~l~~~i~~lL~~~P~~Rps~~-~lL~~~~fF~n 286 (771)
....+|+.+.+++++||..||.+||++. ++++| +||++
T Consensus 217 ~~~~~~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~h-pff~~ 260 (320)
T d1xjda_ 217 MDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQH-PLFRE 260 (320)
T ss_dssp HCCCCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGS-GGGTT
T ss_pred cCCCCCCccCCHHHHHHHHHhcccCCCCCcCHHHHHHhC-chhcc
Confidence 1135678899999999999999999995 78888 67764
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.5e-40 Score=344.85 Aligned_cols=242 Identities=19% Similarity=0.229 Sum_probs=194.6
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch----hHHHHHHHHHHHHhcCC--CCCeeEEeeeEEe
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD----GHLAAARNGVKRLRTVR--HPNILAFLHSTEV 90 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~----~~~~~~~~ei~~Lk~Lr--HPnIlkv~d~~e~ 90 (771)
..+|++++.||+|+ | +||+|+++.+|+.||||++.+....+ .....+.+|+.+|++++ ||||+++++++++
T Consensus 3 ~~~Y~i~~~lG~G~fg--~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~ 80 (273)
T d1xwsa_ 3 ESQYQVGPLLGSGGFG--SVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 80 (273)
T ss_dssp TTTEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred CCeEEEeEEEeeCCCe--EEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEee
Confidence 45799999999998 8 99999999999999999998643221 11233568999999997 9999999999987
Q ss_pred cccCcCCcccEEEEEecCCc---chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC-CC
Q 004157 91 ENIDATSTKITIYIVTEPVM---PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ-TL 166 (771)
Q Consensus 91 e~~d~~~~~~~iyIVtE~v~---~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~-~G 166 (771)
+ +.+|+|||++. .+.+++...... ....++.++.||+.||.|||+ .+++||||||+||+++. .+
T Consensus 81 ~--------~~~~lv~e~~~~~~~l~~~~~~~~~l---~e~~~~~~~~qi~~al~~lH~-~~iiHrDiKp~NIll~~~~~ 148 (273)
T d1xwsa_ 81 P--------DSFVLILERPEPVQDLFDFITERGAL---QEELARSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRG 148 (273)
T ss_dssp S--------SEEEEEEECCSSEEEHHHHHHHHCSC---CHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEEETTTT
T ss_pred C--------CeEEEEEEeccCcchHHHHHhccCCC---CHHHHHHHHHHHHHHHHHHHH-CCCccccCcccceEEecCCC
Confidence 4 48999999993 577777766432 344566679999999999997 99999999999999985 47
Q ss_pred cEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh
Q 004157 167 DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL 246 (771)
Q Consensus 167 ~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l 246 (771)
.+||+|||++....... .....++..|+|||++.+. ..++.++|||||||++|||++|..||...+-
T Consensus 149 ~vkl~DFG~a~~~~~~~--------~~~~~GT~~y~aPE~~~~~-----~~~~~~~DiwSlGvilyell~g~~Pf~~~~~ 215 (273)
T d1xwsa_ 149 ELKLIDFGSGALLKDTV--------YTDFDGTRVYSPPEWIRYH-----RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 215 (273)
T ss_dssp EEEECCCTTCEECCSSC--------BCCCCSCGGGSCHHHHHHS-----CBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH
T ss_pred eEEECccccceeccccc--------ccccccCCCcCCHHHHcCC-----CCCCcccccccceeeehhHhhCCCCCCCchH
Confidence 99999999997654321 1123445689999998763 2345679999999999999999999875431
Q ss_pred ------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcch
Q 004157 247 ------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNK 287 (771)
Q Consensus 247 ------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n~ 287 (771)
.....+|..+.+++.+||..||.+|||+.++++| +||++.
T Consensus 216 i~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~h-p~~~~~ 261 (273)
T d1xwsa_ 216 IIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH-PWMQDV 261 (273)
T ss_dssp HHHCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS-GGGSSC
T ss_pred HhhcccCCCCCCCHHHHHHHHHHccCCHhHCcCHHHHhcC-HhhCCC
Confidence 1225688899999999999999999999999998 677653
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-39 Score=341.05 Aligned_cols=241 Identities=17% Similarity=0.210 Sum_probs=187.8
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
++...|++++.||+|+ | +||+|+.+ ..||||++..........+.+++|+++|++++||||+++++++..
T Consensus 5 i~~~~~~~~~~lG~G~fg--~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~---- 75 (276)
T d1uwha_ 5 IPDGQITVGQRIGSGSFG--TVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA---- 75 (276)
T ss_dssp CCTTCCCCCSEEEECSSC--EEEEEESS---SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS----
T ss_pred cccccEEEEEEEeeCCCc--EEEEEEEC---CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec----
Confidence 3456799999999999 9 99999864 369999998765555667889999999999999999999987643
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
..+||||||| ++|.++|...... .....+..++.||+.||.|||+ .+||||||||+||+++.+|.+||+|
T Consensus 76 -----~~~~lv~Ey~~~g~L~~~l~~~~~~--~~~~~~~~i~~qi~~gl~yLH~-~~ivHrDlKp~NiLl~~~~~~Kl~D 147 (276)
T d1uwha_ 76 -----PQLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGMDYLHA-KSIIHRDLKSNNIFLHEDLTVKIGD 147 (276)
T ss_dssp -----SSCEEEEECCCEEEHHHHHHTSCCC--CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEEETTSSEEECC
T ss_pred -----cEEEEEEecCCCCCHHHHHhhccCC--CCHHHHHHHHHHHHHHHHHHhc-CCEeccccCHHHEEEcCCCCEEEcc
Confidence 2589999999 5899999764321 2334456679999999999997 8999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----h--
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----L-- 246 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----l-- 246 (771)
||+++........ .......++..|+|||++.+.- ...++.++|||||||++|||++|..||.... +
T Consensus 148 FGla~~~~~~~~~----~~~~~~~gt~~y~APE~l~~~~---~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~ 220 (276)
T d1uwha_ 148 FGLATVKSRWSGS----HQFEQLSGSILWMAPEVIRMQD---KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF 220 (276)
T ss_dssp CCCSCC----------------CCCCGGGCCHHHHTTCS---SCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHH
T ss_pred ccceeeccccCCc----ccccccccCcccCCHHHHhccc---CCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHH
Confidence 9999766432111 0111223445899999986421 1246789999999999999999999885321 1
Q ss_pred ------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 ------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 ------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....+|+.+.+++.+||+.+|.+|||+.+++++
T Consensus 221 ~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~ 266 (276)
T d1uwha_ 221 MVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS 266 (276)
T ss_dssp HHHHTSCCCCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHhcCCCCCcchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 0123577889999999999999999999999875
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2.3e-39 Score=343.10 Aligned_cols=235 Identities=15% Similarity=0.211 Sum_probs=188.8
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
..|+++++||.|+ | +||+|+++.+|+.||||++..... ..+.+.+|+++|++|+||||+++++++.++
T Consensus 17 ~~~~~~~~iG~G~fg--~Vy~a~~~~~~~~vAvK~i~~~~~---~~~~~~~E~~il~~l~HpnIv~~~~~~~~~------ 85 (287)
T d1opja_ 17 TDITMKHKLGGGQYG--EVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTRE------ 85 (287)
T ss_dssp GGEEEEEETTTTTTS--SEEEEEEGGGTEEEEEEECCTTCS---CHHHHHHHHHHHHHCCCTTBCCEEEEECSS------
T ss_pred HHeEEeeEEeeCCCe--EEEEEEECCCCeEEEEEEECCccc---hHHHHHHHHHHHHhCCCCCEecCCccEeeC------
Confidence 4688899999999 9 999999999999999999875432 245688999999999999999999999763
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+||||||| ++|.++|....... .....+..++.||+.||+|||+ .+|+||||||+||+++.+|.+||+|||+
T Consensus 86 --~~~~iv~E~~~~g~l~~~l~~~~~~~-~~~~~~~~i~~qi~~gL~yLH~-~~iiHrDlKp~NILl~~~~~~Kl~DFG~ 161 (287)
T d1opja_ 86 --PPFYIITEFMTYGNLLDYLRECNRQE-VSAVVLLYMATQISSAMEYLEK-KNFIHRDLAARNCLVGENHLVKVADFGL 161 (287)
T ss_dssp --SSCEEEEECCTTCBHHHHHHHSCTTT-SCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEECGGGCEEECCCCC
T ss_pred --CeeEEEeecccCcchHHHhhhccccc-hHHHHHHHHHHHHHHHHHHHHH-CCcccCccccCeEEECCCCcEEEccccc
Confidence 3789999999 57999987654322 2344456679999999999997 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCC-CChhhh--------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL-SKTEEL-------- 246 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p-~~~~~l-------- 246 (771)
++....... .......++..|+|||++.+ ..++.++|||||||++|||++|+.| +...+.
T Consensus 162 a~~~~~~~~-----~~~~~~~g~~~y~aPE~~~~------~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~ 230 (287)
T d1opja_ 162 SRLMTGDTY-----TAHAGAKFPIKWTAPESLAY------NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE 230 (287)
T ss_dssp TTTCCSSSS-----EEETTEEECGGGCCHHHHHH------CCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH
T ss_pred eeecCCCCc-----eeeccccccccccChHHHcC------CCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHh
Confidence 987654211 11111223447999999876 3677899999999999999996654 432211
Q ss_pred -----hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 247 -----RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 247 -----~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.....+|+.+.+++.+||+.+|.+|||+.++++
T Consensus 231 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~ 268 (287)
T d1opja_ 231 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 268 (287)
T ss_dssp TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence 112457888999999999999999999999865
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=5.4e-39 Score=339.73 Aligned_cols=241 Identities=16% Similarity=0.265 Sum_probs=192.1
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.+|++.++||+|+ | +||+|+++ +|+.||||++......+...+.+.+|+++|++|+||||++++++++.+
T Consensus 2 ~~Y~~~~~iG~G~fg--~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~------ 72 (286)
T d1ob3a_ 2 EKYHGLEKIGEGTYG--VVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTK------ 72 (286)
T ss_dssp CSEEEEEEEEEETTE--EEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECS------
T ss_pred CCceeccEEecCCCc--EEEEEEeC-CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccC------
Confidence 3799999999998 8 99999987 789999999987655555567889999999999999999999999874
Q ss_pred cccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
+.+||+||++ +.+...+.... .......+..++.||+.||+|||+ .+||||||||+||+++.+|.+||+|||++
T Consensus 73 --~~~~i~~e~~~~~~~~~~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~-~~IvHrDiKp~NIll~~~~~~kl~DfG~a 147 (286)
T d1ob3a_ 73 --KRLVLVFEHLDQDLKKLLDVCE--GGLESVTAKSFLLQLLNGIAYCHD-RRVLHRDLKPQNLLINREGELKIADFGLA 147 (286)
T ss_dssp --SCEEEEEECCSEEHHHHHHTST--TCCCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEECTTSCEEECCTTHH
T ss_pred --CceeEEEEeehhhhHHHHHhhc--CCcchhhhHHHHHHHHHHHHHhcc-CcEEecCCCCceeeEcCCCCEEecccccc
Confidence 3789999999 45555554322 223455577789999999999997 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----hh-----
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LR----- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----l~----- 247 (771)
........ ......++..|+|||.+.+. ..++.++|+|||||++|||++|..||.... +.
T Consensus 148 ~~~~~~~~------~~~~~~~~~~y~~pE~~~~~-----~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~ 216 (286)
T d1ob3a_ 148 RAFGIPVR------KYTHEIVTLWYRAPDVLMGS-----KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRI 216 (286)
T ss_dssp HHHCC---------------CCCTTCCHHHHTTC-----CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred eecccCcc------ccceecccchhhhHHHHhCC-----CCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHh
Confidence 87654221 11223455689999998753 456789999999999999999999985321 00
Q ss_pred --------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 --------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 --------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
....+++.+.+++.+||..||++|||+.++++| +||+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~H-p~f~ 285 (286)
T d1ob3a_ 217 LGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH-AYFK 285 (286)
T ss_dssp HCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS-GGGG
T ss_pred hCCCChhhccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcC-cccC
Confidence 012345678899999999999999999999999 6664
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=7.8e-39 Score=337.09 Aligned_cols=242 Identities=18% Similarity=0.225 Sum_probs=191.8
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
+.+|++.+.||.|+ | +||+|+++.+|+.||||++.+.... ......+.+|+++|++++||||++++++++.++..
T Consensus 6 ~drY~i~~~lG~G~fg--~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~- 82 (277)
T d1o6ya_ 6 SDRYELGEILGFGGMS--EVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPA- 82 (277)
T ss_dssp TTTEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSS-
T ss_pred cceeEEeEEEeeCCCe--EEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCC-
Confidence 45799999999998 8 9999999999999999999876543 34567789999999999999999999999876533
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
...+||||||| ++|..++...+.. ....+..++.||+.||.|||+ .+++||||||+||+++.++..+|+||
T Consensus 83 ---~~~~~lvmE~~~g~~L~~~~~~~~~l---~~~~~~~i~~qi~~al~~lH~-~~iiHrDiKP~NIll~~~~~~~l~d~ 155 (277)
T d1o6ya_ 83 ---GPLPYIVMEYVDGVTLRDIVHTEGPM---TPKRAIEVIADACQALNFSHQ-NGIIHRDVKPANIMISATNAVKVMDF 155 (277)
T ss_dssp ---SEEEEEEEECCCEEEHHHHHHHHCSC---CHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEEETTSCEEECCC
T ss_pred ---CceEEEEEECCCCCEehhhhcccCCC---CHHHHHHHHHHHHHHHHHHHh-CCccCccccCcccccCccccceeehh
Confidence 34689999999 5799888776532 334466679999999999997 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------- 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l------- 246 (771)
|++......... ........++..|+|||++.+ ..++.++|||||||++|||++|.+||.....
T Consensus 156 ~~~~~~~~~~~~---~~~~~~~~Gt~~Y~aPE~~~~------~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~ 226 (277)
T d1o6ya_ 156 GIARAIADSGNS---VTQTAAVIGTAQYLSPEQARG------DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQH 226 (277)
T ss_dssp TTCEECC-------------------TTCCHHHHTT------CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred hhhhhhcccccc---ccccccccCcccccCHHHHcC------CCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHH
Confidence 998765432211 111223345569999999876 3577899999999999999999999864321
Q ss_pred ---------hccCCCCcchHHHHHHHhccCCCCCC-ChHHHh
Q 004157 247 ---------RNTASIPKSLLPDYQRLLSSMPSRRL-NSSKLI 278 (771)
Q Consensus 247 ---------~~~~~IP~~l~~~i~~lL~~~P~~Rp-s~~~lL 278 (771)
.....+|+.+.+++.+||..||.+|| ++++++
T Consensus 227 ~~~~~~~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~ 268 (277)
T d1o6ya_ 227 VREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMR 268 (277)
T ss_dssp HHCCCCCGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHH
T ss_pred HhcCCCCCchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHH
Confidence 11246888999999999999999999 566654
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.5e-39 Score=347.11 Aligned_cols=245 Identities=16% Similarity=0.276 Sum_probs=194.8
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
..+|++.++||.|+ | +||+|+++.+|+.||||++.+....+...+.+.+|+++|++|+||||+++++++...+..
T Consensus 17 ~~~Y~~i~~lG~G~fg--~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~-- 92 (346)
T d1cm8a_ 17 RAVYRDLQPVGSGAYG--AVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETL-- 92 (346)
T ss_dssp BSSEEEEEEC--------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSST--
T ss_pred CCcEEEEEEEecCCCe--EEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccc--
Confidence 45799999999999 9 999999999999999999987666666678899999999999999999999999764311
Q ss_pred CcccEEEEEecCCc-chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 97 STKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 97 ~~~~~iyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
....++|||||||+ .|..+++...+ ....++.++.||+.||.|||+ .||+||||||+||+++.+|.+||+|||+
T Consensus 93 ~~~~~~~lv~e~~~~~l~~~~~~~~l----~~~~~~~~~~qi~~aL~~LH~-~~IiHrDiKp~NIL~~~~~~~kl~Dfg~ 167 (346)
T d1cm8a_ 93 DDFTDFYLVMPFMGTDLGKLMKHEKL----GEDRIQFLVYQMLKGLRYIHA-AGIIHRDLKPGNLAVNEDCELKILDFGL 167 (346)
T ss_dssp TTCCCCEEEEECCSEEHHHHHHHCCC----CHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred cccceEEEEEecccccHHHHHHhccc----cHHHHHHHHHHHHHHHHHHHh-CCCcccccCcchhhcccccccccccccc
Confidence 11346899999996 46666665443 345577779999999999997 9999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh---------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--------- 246 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l--------- 246 (771)
+....... ....++..|+|||++.+. ..++.++|||||||++|+|++|.+||...+.
T Consensus 168 a~~~~~~~---------~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~ 233 (346)
T d1cm8a_ 168 ARQADSEM---------TGYVVTRWYRAPEVILNW-----MRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMK 233 (346)
T ss_dssp CEECCSSC---------CSSCSCGGGCCTHHHHTT-----TCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred eeccCCcc---------ccccccccccCHHHHcCC-----CCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHh
Confidence 98765421 123445689999998653 3567899999999999999999998853210
Q ss_pred ----------------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 247 ----------------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 247 ----------------------------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
.....+++.+.+++.+||..||.+|||+.++|+| +||++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~H-p~f~~ 306 (346)
T d1cm8a_ 234 VTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH-PYFES 306 (346)
T ss_dssp HHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS-GGGTT
T ss_pred ccCCCcHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcC-hhhCc
Confidence 0012456678899999999999999999999999 56654
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-38 Score=345.34 Aligned_cols=236 Identities=17% Similarity=0.230 Sum_probs=189.5
Q ss_pred CceecC-CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhc-CCCCCeeEEeeeEEecccCcC
Q 004157 20 PYNIGD-PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRT-VRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 20 ~Y~i~e-~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~-LrHPnIlkv~d~~e~e~~d~~ 96 (771)
.|+|.+ .||.|+ | +||+|+++.+|+.||||++... ..+++|++++.+ ++||||++++++|++....
T Consensus 12 ~y~i~~~~lG~G~fg--~Vy~a~~~~~~~~vAiK~i~~~-------~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~-- 80 (335)
T d2ozaa1 12 DYKVTSQVLGLGING--KVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAG-- 80 (335)
T ss_dssp TEEEEEEEEEECSSC--EEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT--
T ss_pred CEEEeeEEeeeccCe--EEEEEEECCCCCEEEEEEECCc-------HHHHHHHHHHHHhcCCCCCCeEEEEEeecccC--
Confidence 698865 599999 9 9999999999999999999742 346789998655 5899999999999863222
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC---CCcEEEE
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ---TLDWKLH 171 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~---~G~~KL~ 171 (771)
..++||||||| ++|.++|+..+.. ......++.++.||+.||.|||+ .+|+||||||+||+++. .|.+||+
T Consensus 81 --~~~~~ivmEy~~gg~L~~~i~~~~~~-~l~e~~~~~i~~qi~~al~ylH~-~~iiHRDiKp~NIll~~~~~~~~~Kl~ 156 (335)
T d2ozaa1 81 --RKCLLIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKLT 156 (335)
T ss_dssp --EEEEEEEEECCCSEEHHHHHHSCSCC-CEEHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEESCSSTTCCEEEC
T ss_pred --CCEEEEEEECCCCCcHHHHHHhcCCC-CcCHHHHHHHHHHHHHHHHHHHH-cCCcccccccccccccccccccccccc
Confidence 35899999999 5899999865321 23455577889999999999997 99999999999999986 5679999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh----
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---- 247 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~---- 247 (771)
|||+++....... .....++..|+|||++.+ ..++.++|+|||||++|+|++|.+||......
T Consensus 157 DFG~a~~~~~~~~-------~~~~~gt~~y~aPE~~~~------~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~ 223 (335)
T d2ozaa1 157 DFGFAKETTSHNS-------LTTPCYTPYYVAPEVLGP------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP 223 (335)
T ss_dssp CCTTCEECCCCCC-------CCCCSCCCSSCCCCCCCG------GGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC----
T ss_pred ccceeeeccCCCc-------cccccCCcccCCcHHHcC------CCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHH
Confidence 9999987654321 112345669999999876 35678999999999999999999998543210
Q ss_pred ----cc------------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 248 ----NT------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 248 ----~~------------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
.+ ..+++.+.+++++||..||.+||++.++++|+ ||
T Consensus 224 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp-~~ 275 (335)
T d2ozaa1 224 GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP-WI 275 (335)
T ss_dssp ----CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSH-HH
T ss_pred HHHHHHhcCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCH-Hh
Confidence 00 13567789999999999999999999999994 44
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-38 Score=339.13 Aligned_cols=248 Identities=19% Similarity=0.283 Sum_probs=188.2
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCC-CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC---CCCCeeEEeeeEEecc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDD-GSPVSIFSISGTNAQDGHLAAARNGVKRLRTV---RHPNILAFLHSTEVEN 92 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~-g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L---rHPnIlkv~d~~e~e~ 92 (771)
..+|++.++||.|+ | +||+|+++.+ ++.||||++......+.....+.+|+.+|+.| +||||+++++++....
T Consensus 6 ~~~Y~i~~~LG~G~fg--~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~ 83 (305)
T d1blxa_ 6 DQQYECVAEIGEGAYG--KVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 83 (305)
T ss_dssp GGTEEEEEEEEEETTE--EEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred cCCEEEEEEEecccCe--EEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccc
Confidence 35799999999998 8 9999999765 56799999975433332223345666666655 8999999999987533
Q ss_pred cCcCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEE
Q 004157 93 IDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~ 171 (771)
.+ ...++|++||+| +.+..++...... ......++.+++||+.||.|||+ .+|+||||||+||+++..|.+||+
T Consensus 84 ~~---~~~~~~~~~e~~~~~~~~~~~~~~~~-~~~~~~~~~~~~qi~~aL~yLH~-~~ivHrDiKp~NILi~~~~~~kl~ 158 (305)
T d1blxa_ 84 TD---RETKLTLVFEHVDQDLTTYLDKVPEP-GVPTETIKDMMFQLLRGLDFLHS-HRVVHRDLKPQNILVTSSGQIKLA 158 (305)
T ss_dssp CS---SEEEEEEEEECCSCBHHHHHHHSCTT-CSCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEECTTCCEEEC
T ss_pred cc---cCceEEEEEEeccCCchhhhhhccCC-CCCHHHHHHHHHHHHHHHHHHHh-CCEEecCCCccEEEEcCCCCeeec
Confidence 21 145899999999 4444444433222 23345567789999999999997 899999999999999999999999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R 247 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~ 247 (771)
|||++....... ......++..|+|||++.+ ..++.++|||||||++|||++|.+||..... .
T Consensus 159 dfg~~~~~~~~~-------~~~~~~gT~~Y~APE~~~~------~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~ 225 (305)
T d1blxa_ 159 DFGLARIYSFQM-------ALTSVVVTLWYRAPEVLLQ------SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLG 225 (305)
T ss_dssp SCCSCCCCCGGG-------GGCCCCCCCTTCCHHHHTT------CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred chhhhhhhcccc-------cCCCcccChhhcCcchhcC------CCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHH
Confidence 999987554321 1223345669999999876 4678899999999999999999999853210 0
Q ss_pred -----------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 -----------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 -----------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....+++.+.+++.+||..||.+|||+.++|+| +||++
T Consensus 226 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~H-pff~~ 298 (305)
T d1blxa_ 226 KILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH-PYFQD 298 (305)
T ss_dssp HHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS-GGGTT
T ss_pred HHHHhhCCCchhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC-hhhcC
Confidence 012456678899999999999999999999999 56654
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.5e-38 Score=338.90 Aligned_cols=242 Identities=14% Similarity=0.150 Sum_probs=179.3
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCC---cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGS---PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~---~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
...|++++.||+|+ | +||+|+++.+|+ .|+||++.... .+...+.+.+|+++|++|+||||+++++++..+
T Consensus 25 ~~~~~~~~~lG~G~fg--~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-- 99 (299)
T d1jpaa_ 25 ISCVKIEQVIGAGEFG--EVCSGHLKLPGKREIFVAIKTLKSGY-TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKS-- 99 (299)
T ss_dssp GGGEEEEEEEEECSSS--EEEEEEECC---CCEEEEEEECCSSC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS--
T ss_pred hhhcEEeeEEeeCCCe--EEEEEEEeCCCCEEEEEEEEEECccc-CHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeC--
Confidence 34699999999999 9 999999988775 48888876543 334566789999999999999999999999763
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEE
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~ 171 (771)
..+||||||| ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+|+.+|.+||+
T Consensus 100 ------~~~~iv~Ey~~~g~L~~~~~~~~~~--l~~~~~~~i~~qia~gl~yLH~-~~iiHrDlKp~NILl~~~~~~Kl~ 170 (299)
T d1jpaa_ 100 ------TPVMIITEFMENGSLDSFLRQNDGQ--FTVIQLVGMLRGIAAGMKYLAD-MNYVHRDLAARNILVNSNLVCKVS 170 (299)
T ss_dssp ------SSCEEEEECCTTEEHHHHHHTTTTC--SCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEECTTCCEEEC
T ss_pred ------CEEEEEEEecCCCcceeeeccccCC--CCHHHHHHHHHHHHHHHHHHhh-CCCccCccccceEEECCCCcEEEC
Confidence 3789999999 5799888764321 2233455669999999999997 899999999999999999999999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh----
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL---- 246 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l---- 246 (771)
|||+++.......... ........++..|+|||++.+ ..++.++|||||||++|||++ |.+||.....
T Consensus 171 DFGla~~~~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~------~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~ 243 (299)
T d1jpaa_ 171 DFGLSRFLEDDTSDPT-YTSALGGKIPIRWTAPEAIQY------RKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVI 243 (299)
T ss_dssp CC------------------------CGGGSCHHHHHS------CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH
T ss_pred CcccceEccCCCCcce-eeecccccCCccccCHHHHhc------CCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHH
Confidence 9999987654321110 000112234458999999876 367789999999999999997 7888753221
Q ss_pred ---------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 ---------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 ---------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....+|..+.+++.+||+.+|.+||++.++++.
T Consensus 244 ~~i~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~ 286 (299)
T d1jpaa_ 244 NAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNT 286 (299)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred HHHHcCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 1124577889999999999999999999998764
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-38 Score=333.00 Aligned_cols=234 Identities=13% Similarity=0.113 Sum_probs=179.5
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
..|++.+.||.|+ | +||+|+++ +++.||||++...... .+.+.+|++.+++|+||||+++++++..+
T Consensus 5 ~~~~~~~~iG~G~fg--~Vy~~~~~-~~~~vAvK~i~~~~~~---~~~~~~E~~~l~~l~HpnIv~~~g~~~~~------ 72 (263)
T d1sm2a_ 5 SELTFVQEIGSGQFG--LVHLGYWL-NKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVCLEQ------ 72 (263)
T ss_dssp SCEEEEEEEECCSSC--CEEEEEET-TTEEEEEEECCSSSSC---HHHHHHHHHHHHHCCCTTBCCEEEEECSS------
T ss_pred HHcEEEEEEeeCCCe--EEEEEEEC-CCCEEEEEEECCCcCc---HHHHHHHHHHHHhcCCCCcccccceeccC------
Confidence 4699999999999 9 99999987 5778999998764333 34678999999999999999999999764
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+||||||| ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 73 --~~~~lv~E~~~~g~L~~~l~~~~~~--~~~~~~~~i~~qia~gl~~lH~-~~iiHrDlKp~Nill~~~~~~Kl~DFGl 147 (263)
T d1sm2a_ 73 --APICLVFEFMEHGCLSDYLRTQRGL--FAAETLLGMCLDVCEGMAYLEE-ACVIHRDLAARNCLVGENQVIKVSDFGM 147 (263)
T ss_dssp --SSCEEEEECCTTCBHHHHHHTTTTC--CCHHHHHHHHHHHHHHHHHHHH-TTCCCTTCSGGGEEECGGGCEEECSCC-
T ss_pred --CceEEEEEecCCCcHHHHhhccccC--CCHHHHHHHHHHHHHHHHhhhc-cceeecccchhheeecCCCCeEecccch
Confidence 3789999999 6899988765322 2233445569999999999997 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhC-CCCCChhhh----h---
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG-MRLSKTEEL----R--- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g-~~p~~~~~l----~--- 247 (771)
++....... .......++..|+|||++.+ ..++.++|||||||++|||+++ .+++..... .
T Consensus 148 a~~~~~~~~-----~~~~~~~gt~~y~aPE~l~~------~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~ 216 (263)
T d1sm2a_ 148 TRFVLDDQY-----TSSTGTKFPVKWASPEVFSF------SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS 216 (263)
T ss_dssp ----------------------CTTSCCHHHHTT------CCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHH
T ss_pred heeccCCCc-----eeecceecCcccCChHHhcC------CCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Confidence 987654221 11122344568999999876 3678899999999999999995 555543211 0
Q ss_pred ------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 ------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 ------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
....+|+.+.+++.+||+.+|.+||++++++++
T Consensus 217 ~~~~~~~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 255 (263)
T d1sm2a_ 217 TGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQ 255 (263)
T ss_dssp HTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hcCCCCCccccCHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence 113457789999999999999999999999875
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-38 Score=341.17 Aligned_cols=255 Identities=18% Similarity=0.269 Sum_probs=188.2
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.+|++.++||+|+ | +||+|+++.+|+.||||++.+....+.....+.+|+++|++|+||||+++++++.........
T Consensus 10 ~rY~i~~~LG~G~fg--~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~ 87 (318)
T d3blha1 10 SKYEKLAKIGQGTFG--EVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR 87 (318)
T ss_dssp GGEEEEEEEEECSSS--EEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC-------
T ss_pred CCEEEEEEEecCcCe--EEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccc
Confidence 4799999999999 9 999999999999999999987655555566788999999999999999999998653311111
Q ss_pred cccEEEEEecCCc-chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
...++|+|||+|. .+...+.... .......++.++.||+.||.|||+ ++|+||||||+||+++.+|.+||+|||++
T Consensus 88 ~~~~~~iv~e~~~~~~~~~~~~~~--~~~~~~~~~~i~~qil~~l~~lH~-~~ivHrDlKp~NILl~~~~~~kl~dfg~~ 164 (318)
T d3blha1 88 CKGSIYLVFDFCEHDLAGLLSNVL--VKFTLSEIKRVMQMLLNGLYYIHR-NKILHRDMKAANVLITRDGVLKLADFGLA 164 (318)
T ss_dssp ---CEEEEEECCCEEHHHHHTCTT--CCCCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEECTTSCEEECCCTTC
T ss_pred cCceEEEEEeccCCCccchhhhcc--cccccHHHHHHHHHHHHHHHHhcc-CCEEecCcCchheeecCCCcEEeeeccee
Confidence 1347999999994 4544433322 123344567779999999999997 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h-----
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R----- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~----- 247 (771)
............ ......++..|+|||++.+. ..++.++|||||||++|||++|.+||..... .
T Consensus 165 ~~~~~~~~~~~~--~~~~~~gT~~Y~aPE~~~~~-----~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~ 237 (318)
T d3blha1 165 RAFSLAKNSQPN--RYTNRVVTLWYRPPELLLGE-----RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQL 237 (318)
T ss_dssp EECCC-----CC--CCCSCCSCGGGCCHHHHTTC-----SSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred eecccccccccc--cccceecCHHHhhHHHHcCC-----CCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHh
Confidence 776543221111 11223455689999998753 4577899999999999999999999853210 0
Q ss_pred ----------cc------------C-------------CCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 ----------NT------------A-------------SIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 ----------~~------------~-------------~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
.. . .....+.+++.+||..||++|+|+.++|+|+ ||++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hp-ff~~ 310 (318)
T d3blha1 238 CGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHD-FFWS 310 (318)
T ss_dssp HCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSG-GGSS
T ss_pred cCCCChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcCh-hhcc
Confidence 00 0 0123456789999999999999999999995 5543
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-37 Score=338.85 Aligned_cols=247 Identities=19% Similarity=0.283 Sum_probs=194.2
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
-+|++.++||+|+ | +||+|+++.+|+.||||++.+.. .....+.+.+|+.+|++|+||||+++++++..+...
T Consensus 8 ~rY~~~~~LG~G~fg--~Vy~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~--- 81 (345)
T d1pmea_ 8 PRYTNLSYIGEGAYG--MVCSAYDNVNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIE--- 81 (345)
T ss_dssp TTEEEEEECC---CC--CEEEEEETTTCSEEEEEEECCTT-CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTT---
T ss_pred CCeEEEEEEeeccCe--EEEEEEECCCCcEEEEEEEehhc-ChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeecccc---
Confidence 4699999999999 9 99999999999999999998643 344567789999999999999999999999764321
Q ss_pred cccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
...++|+++|++ ++|.++++...+ ....++.++.||+.||+|||+ ++||||||||+||+++.+|.+||+|||++
T Consensus 82 ~~~~~~l~~~~~~g~L~~~l~~~~l----~~~~i~~i~~qil~al~yLH~-~~iiHRDIKp~NILl~~~~~~kl~DfG~a 156 (345)
T d1pmea_ 82 QMKDVYLVTHLMGADLYKLLKTQHL----SNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCDLKICDFGLA 156 (345)
T ss_dssp TCCCEEEEEECCCEEHHHHHHHCCC----CHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred ccceEEEEEeecCCchhhhhhcCCC----CHHHHHHHHHHHHHHHHHHHH-CCCcCCCCCcceEEECCCCCEEEcccCce
Confidence 023577887777 689999987653 345577789999999999997 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL---------- 246 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l---------- 246 (771)
.......... .......++..|+|||++... ..++.++|+||+||++|+|++|.+||.....
T Consensus 157 ~~~~~~~~~~---~~~~~~~gt~~y~aPE~l~~~-----~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~ 228 (345)
T d1pmea_ 157 RVADPDHDHT---GFLTEYVATRWYRAPEIMLNS-----KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 228 (345)
T ss_dssp EECCGGGCBC---CTTCCCCSCGGGCCGGGTTTB-----CSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred eeccCCCccc---eeeccccccceechHHHhhcC-----CCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhh
Confidence 7664422111 111223445589999998653 4567899999999999999999998853210
Q ss_pred ---------------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 247 ---------------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 247 ---------------------------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
.....++..+.+++.+||..||.+||++.++|+| +||+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h-pf~~ 299 (345)
T d1pmea_ 229 LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH-PYLE 299 (345)
T ss_dssp HCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS-GGGT
T ss_pred ccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC-Hhhc
Confidence 0012345568899999999999999999999999 4554
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.1e-38 Score=326.52 Aligned_cols=234 Identities=13% Similarity=0.132 Sum_probs=188.8
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
..|+++++||+|+ | +||+|+++ ++..||||++.+.... .+.+.+|++++++++||||+++++++.++
T Consensus 4 ~~~~~~~~iG~G~fg--~Vy~~~~~-~~~~vAvK~l~~~~~~---~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~------ 71 (258)
T d1k2pa_ 4 KDLTFLKELGTGQFG--VVKYGKWR-GQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLSHEKLVQLYGVCTKQ------ 71 (258)
T ss_dssp CCCCCCCCCCEETTE--EEEEEEET-TTEEEEEEEEESSSSC---HHHHHHHHHHHHTCCCTTBCCEEEEECCS------
T ss_pred HHCEEeEEEecCCCe--EEEEEEEC-CCCEEEEEEECcCcCC---HHHHHHHHHHHHhcCCCceeeEEEEEeeC------
Confidence 4699999999999 9 99999986 7889999999875443 34688999999999999999999999763
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+|+||||+ ++|..++...... .....+..++.||++||.|||+ .+++||||||+||+++.++.+||+|||+
T Consensus 72 --~~~~iv~Ey~~~g~l~~~~~~~~~~--~~~~~~~~i~~qi~~gl~~LH~-~~iiH~dlk~~Nill~~~~~~kl~DfG~ 146 (258)
T d1k2pa_ 72 --RPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLES-KQFLHRDLAARNCLVNDQGVVKVSDFGL 146 (258)
T ss_dssp --SSEEEEEECCTTEEHHHHHHSGGGC--CCHHHHHHHHHHHHHHHHHHHH-TTBCCSCCSGGGEEECTTCCEEECCCSS
T ss_pred --CceEEEEEccCCCcHHHhhhccccC--CcHHHHHHHHHHHHHHHHHHhh-cCcccccccceeEEEcCCCcEEECcchh
Confidence 3799999999 5688887654322 1233455669999999999997 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhhh-------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR------- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l~------- 247 (771)
++........ ......++..|+|||++.+ ..++.++|||||||++|||++ |..||......
T Consensus 147 a~~~~~~~~~-----~~~~~~~t~~y~aPE~~~~------~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~ 215 (258)
T d1k2pa_ 147 SRYVLDDEYT-----SSVGSKFPVRWSPPEVLMY------SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA 215 (258)
T ss_dssp CCBCSSSSCC-----CCCCSCCCGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHH
T ss_pred heeccCCCce-----eecccCCCCCcCCcHHhcC------CCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHH
Confidence 9766542211 1112334458999999886 367789999999999999998 77787642211
Q ss_pred ------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 ------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 ------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
....+|+.+.+++.+||+.+|.+|||+.++++|
T Consensus 216 ~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 254 (258)
T d1k2pa_ 216 QGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSN 254 (258)
T ss_dssp TTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred hCCCCCCcccccHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence 124567789999999999999999999999876
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-37 Score=329.44 Aligned_cols=241 Identities=19% Similarity=0.239 Sum_probs=193.9
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.++||+|+ | +||+|+++.+|+.||||++......+.....+.+|+.+|+.++||||++++++++..
T Consensus 3 ry~~i~~LG~G~fg--~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~------- 73 (292)
T d1unla_ 3 KYEKLEKIGEGTYG--TVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD------- 73 (292)
T ss_dssp SEEEEEEEEECSSS--EEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECS-------
T ss_pred CCEeeeEEecCcCe--EEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccc-------
Confidence 699999999998 9 999999999999999999987766666788899999999999999999999999874
Q ss_pred ccEEEEEecCCc--chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+|||+|++. .|..++..... .....+...+.|++.||+|||+ .+|+||||||+||+++.++..||+|||.+
T Consensus 74 -~~~~iv~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~q~~~aL~~lH~-~~IvHrDiKP~NIli~~~~~~kl~DFG~a 148 (292)
T d1unla_ 74 -KKLTLVFEFCDQDLKKYFDSCNGD---LDPEIVKSFLFQLLKGLGFCHS-RNVLHRDLKPQNLLINRNGELKLANFGLA 148 (292)
T ss_dssp -SEEEEEEECCSEEHHHHHHHTTTC---CCHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEECTTCCEEECCCTTC
T ss_pred -cceeEEeeeccccccccccccccc---cchhHHHHHHHHHHHHHHHhhc-CCEeeecccCcccccccCCceeeeecchh
Confidence 48999999993 46555554432 2344466779999999999997 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCC-Chhh----hh----
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLS-KTEE----LR---- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~-~~~~----l~---- 247 (771)
......... ......+..|+|||++.+. ..++.++|||||||++|||++|..|| .... +.
T Consensus 149 ~~~~~~~~~------~~~~~~~~~~~~pe~~~~~-----~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~ 217 (292)
T d1unla_ 149 RAFGIPVRC------YSAEVVTLWYRPPDVLFGA-----KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFR 217 (292)
T ss_dssp EECCSCCSC------CCSCCSCGGGCCHHHHTTC-----SCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHH
T ss_pred hcccCCCcc------ceeeccccchhhhhHhccC-----CCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHh
Confidence 877543211 1122334578999998763 34678999999999999999998764 2110 00
Q ss_pred ---------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 ---------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 ---------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....+++.+.+++.+||..||.+|||++++|+| +||++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~H-p~f~~ 288 (292)
T d1unla_ 218 LLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH-PYFSD 288 (292)
T ss_dssp HHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTS-GGGSS
T ss_pred hcCCCChhhhhhhhhcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcC-hhhcC
Confidence 002344567889999999999999999999999 56653
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.4e-38 Score=332.13 Aligned_cols=238 Identities=15% Similarity=0.132 Sum_probs=186.2
Q ss_pred CCCceecC-CCCCCC-CceEEEEeEECCC--CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 18 DLPYNIGD-PYPSAW-GSWSHFQGTSKDD--GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 18 ~~~Y~i~e-~ig~G~-g~wtVy~g~~k~~--g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
...|.+.+ +||.|+ | +||+|+++.+ +..||||++.... .....+.+.+|+++|++|+||||++++++++.+
T Consensus 7 ~~~~~~~~~~iG~G~fg--~Vy~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~-- 81 (285)
T d1u59a_ 7 RDNLLIADIELGCGNFG--SVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE-- 81 (285)
T ss_dssp GGGEEEEEEEEECCTTE--EEEEEEEC---CCEEEEEEEECSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESS--
T ss_pred ccCeEECCcEEecccCe--EEEEEEEecCCCcEEEEEEEEChhc-CHHHHHHHHHHHHHHHhCCCCCEeeEeeeeccC--
Confidence 44688888 599998 8 9999988754 4479999997643 334567789999999999999999999998742
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEE
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~ 171 (771)
.+||||||| ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+
T Consensus 82 -------~~~lvmE~~~~g~L~~~l~~~~~--~l~~~~~~~i~~qi~~gL~ylH~-~~iiHrDlKp~Nill~~~~~~Kl~ 151 (285)
T d1u59a_ 82 -------ALMLVMEMAGGGPLHKFLVGKRE--EIPVSNVAELLHQVSMGMKYLEE-KNFVHRDLAARNVLLVNRHYAKIS 151 (285)
T ss_dssp -------SEEEEEECCTTEEHHHHHTTCTT--TSCHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEEEETTEEEEC
T ss_pred -------eEEEEEEeCCCCcHHHHhhcccc--CCCHHHHHHHHHHHHHHHHHHHh-CCeecCcCchhheeeccCCceeec
Confidence 589999999 589998755321 12334456679999999999997 899999999999999999999999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh----
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL---- 246 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l---- 246 (771)
|||+++.......... ......++..|+|||++.++ .++.++|||||||++|||++ |..||.....
T Consensus 152 DFGla~~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~ 222 (285)
T d1u59a_ 152 DFGLSKALGADDSYYT---ARSAGKWPLKWYAPECINFR------KFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVM 222 (285)
T ss_dssp CCTTCEECTTCSCEEC---CCCSSCCCGGGCCHHHHHHC------EECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHH
T ss_pred cchhhhcccccccccc---cccccccCccccChHHHhCC------CCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHH
Confidence 9999987754321110 01112334589999998763 56789999999999999997 8888854211
Q ss_pred ---------hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 247 ---------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 247 ---------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.....+|..+.+++.+||+.+|.+||++.++++
T Consensus 223 ~~i~~~~~~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~ 264 (285)
T d1u59a_ 223 AFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQ 264 (285)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred HHHHcCCCCCCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence 112467888999999999999999999998865
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-37 Score=338.74 Aligned_cols=244 Identities=16% Similarity=0.244 Sum_probs=190.2
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
..|+..+.||.|+ | +||+|+++.+|+.||||++..... ...+|+++|++|+||||+++++++...... .
T Consensus 20 ~~Y~~~k~LG~G~fg--~Vy~a~~~~~~~~vAiK~i~~~~~------~~~~Ei~il~~l~h~niv~~~~~~~~~~~~--~ 89 (350)
T d1q5ka_ 20 VSYTDTKVIGNGSFG--VVYQAKLCDSGELVAIKKVLQDKR------FKNRELQIMRKLDHCNIVRLRYFFYSSGEK--K 89 (350)
T ss_dssp EEEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEECCSS------SCCHHHHHHHHCCCTTBCCEEEEEEEC--C--C
T ss_pred CCcEeeeEEeeCcCe--EEEEEEECCCCCEEEEEEECccch------HHHHHHHHHHhcCCCCCCcEEEEEEecCcc--C
Confidence 3599999999998 8 999999999999999999986432 234799999999999999999998653211 0
Q ss_pred cccEEEEEecCC-cchHHHHHHh-CCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC-cEEEEccC
Q 004157 98 TKITIYIVTEPV-MPLSEKIKEL-GLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL-DWKLHAFD 174 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~-~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G-~~KL~dFg 174 (771)
...++||||||| +.+...+... ..........++.+++||+.||+|||+ +||+||||||+||+++.+| .+||+|||
T Consensus 90 ~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~-~~IiHrDiKp~NILl~~~~~~~kl~DFG 168 (350)
T d1q5ka_ 90 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFG 168 (350)
T ss_dssp SCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT-TTEECCCCCGGGEEECTTTCCEEECCCT
T ss_pred CceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHh-cCCcccCCCcceEEEecCCCceeEeccc
Confidence 145789999999 4565555432 112223345577789999999999996 9999999999999999875 89999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h---
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R--- 247 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~--- 247 (771)
++........ .....++..|+|||.+.+. ..++.++|||||||++|||++|.+||..... .
T Consensus 169 ~a~~~~~~~~-------~~~~~gt~~y~aPE~~~~~-----~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~ 236 (350)
T d1q5ka_ 169 SAKQLVRGEP-------NVSYICSRYYRAPELIFGA-----TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 236 (350)
T ss_dssp TCEECCTTSC-------CCSCCSCTTSCCHHHHTTC-----SSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHH
T ss_pred chhhccCCcc-------cccccccccccChHHhhcc-----cCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHH
Confidence 9987654221 1223556799999987653 4678899999999999999999998853210 0
Q ss_pred ----------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 ----------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 ----------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....+++.+.+++.+||..||.+|||+.++|+| +||++
T Consensus 237 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H-p~f~~ 308 (350)
T d1q5ka_ 237 KVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH-SFFDE 308 (350)
T ss_dssp HHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS-GGGGG
T ss_pred HHhCCChHHhhhhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcC-Hhhcc
Confidence 012356678999999999999999999999998 56654
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-38 Score=340.78 Aligned_cols=240 Identities=17% Similarity=0.155 Sum_probs=187.4
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCC-----cEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEec
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGS-----PVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVE 91 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~-----~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e 91 (771)
..|++++.||.|+ | +||+|+++.+++ .|+||++..... ......+.+|+++|+++ +||||++++++++++
T Consensus 37 ~~~~l~~~lG~G~fG--~Vy~a~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~ 113 (325)
T d1rjba_ 37 ENLEFGKVLGSGAFG--KVMNATAYGISKTGVSIQVAVKMLKEKAD-SSEREALMSELKMMTQLGSHENIVNLLGACTLS 113 (325)
T ss_dssp GGEEEEEEEEECSSE--EEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HHeEEeeEEeeCCCe--EEEEEEEcCCCcccceeEEEEEEeccccC-HHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeC
Confidence 4688999999998 8 999999886654 699999875432 23455688999999998 899999999999864
Q ss_pred ccCcCCcccEEEEEecCC--cchHHHHHHhCCC--------------------CCCcHHHHHHHHHHHHHHHHHHHcCCC
Q 004157 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLE--------------------GSQRDEYYAWGLNQIAKAVSFLNNDCK 149 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~--------------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ 149 (771)
..+||||||| ++|.++|+..... .......+..++.||+.||.|||+ .+
T Consensus 114 --------~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~-~~ 184 (325)
T d1rjba_ 114 --------GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF-KS 184 (325)
T ss_dssp --------SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH-TT
T ss_pred --------CeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh-CC
Confidence 3789999999 6899999765311 112234466679999999999997 89
Q ss_pred ceecCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHH
Q 004157 150 LVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGC 229 (771)
Q Consensus 150 ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~ 229 (771)
||||||||+||+++.+|.+||+|||+++....... ........++..|+|||++.+ ..++.++|||||||
T Consensus 185 IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~----~~~~~~~~gt~~y~aPE~l~~------~~~~~~~DiwS~Gv 254 (325)
T d1rjba_ 185 CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN----YVVRGNARLPVKWMAPESLFE------GIYTIKSDVWSYGI 254 (325)
T ss_dssp EEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTT----SEEETTEEECGGGCCHHHHHH------CCCCHHHHHHHHHH
T ss_pred eeeccCchhccccccCCeEEEeeccccccccCCCc----eeeeccccCCCccCChHHHcC------CCCCcceeccchhH
Confidence 99999999999999999999999999976544211 111112234558999999876 46788999999999
Q ss_pred HHHHHhh-CCCCCChhh----hh----------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 230 LIYELFS-GMRLSKTEE----LR----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 230 li~el~~-g~~p~~~~~----l~----------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
++|||++ |.+||.... +. ....+|+.+.+++.+||+.+|++|||+++++++
T Consensus 255 il~emlt~g~~Pf~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~ 320 (325)
T d1rjba_ 255 LLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF 320 (325)
T ss_dssp HHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 9999997 788875421 11 124577889999999999999999999999876
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-38 Score=333.00 Aligned_cols=234 Identities=15% Similarity=0.158 Sum_probs=181.2
Q ss_pred eecC-CCCCCC-CceEEEEeEECC--CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 22 NIGD-PYPSAW-GSWSHFQGTSKD--DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 22 ~i~e-~ig~G~-g~wtVy~g~~k~--~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.+.+ +||+|+ | +||+|+.+. +++.||||++..........+.+.+|+++|++|+||||++++++++.+
T Consensus 9 ~le~k~iG~G~fG--~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~------ 80 (277)
T d1xbba_ 9 TLEDKELGSGNFG--TVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE------ 80 (277)
T ss_dssp EEEEEEEEECSSE--EEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESS------
T ss_pred eecCCCcccCCCe--EEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEeccC------
Confidence 4443 699998 8 999998653 457899999976544445567889999999999999999999998642
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
.+||||||| ++|.++++..... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 81 ---~~~lvmE~~~~g~L~~~l~~~~~l---~~~~~~~i~~qi~~gl~ylH~-~~iiHrDlKp~Nill~~~~~~kl~DFGl 153 (277)
T d1xbba_ 81 ---SWMLVMEMAELGPLNKYLQQNRHV---KDKNIIELVHQVSMGMKYLEE-SNFVHRDLAARNVLLVTQHYAKISDFGL 153 (277)
T ss_dssp ---SEEEEEECCTTEEHHHHHHHCTTC---CHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEEEETTEEEECCCTT
T ss_pred ---CEEEEEEcCCCCcHHHHHhhccCC---CHHHHHHHHHHHHHHHhhHHh-CCcccCCCcchhhcccccCcccccchhh
Confidence 478999999 5899999875432 234456669999999999997 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh--------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL-------- 246 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l-------- 246 (771)
++......... .......++..|+|||++.+. .++.++|||||||++|||++ |.+||.....
T Consensus 154 a~~~~~~~~~~---~~~~~~~gt~~y~APE~l~~~------~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~ 224 (277)
T d1xbba_ 154 SKALRADENYY---KAQTHGKWPVKWYAPECINYY------KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 224 (277)
T ss_dssp CEECCTTCSEE---EC----CCCGGGCCHHHHHHC------EEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH
T ss_pred hhhcccccccc---ccccccCCCceecCchhhcCC------CCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHH
Confidence 98765422110 001122344589999998763 56679999999999999997 7888854221
Q ss_pred -----hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 247 -----RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 247 -----~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.....+|..+.+++.+||+.+|.+||++.++++
T Consensus 225 ~~~~~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~ 262 (277)
T d1xbba_ 225 KGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL 262 (277)
T ss_dssp TTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred cCCCCCCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence 112457788999999999999999999998854
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-38 Score=332.19 Aligned_cols=235 Identities=15% Similarity=0.157 Sum_probs=183.8
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
+...|+++++||.|+ | +||+|+.+ ++..||||++...... .+.+.+|+++|++|+||||+++++++..
T Consensus 11 ~~~~~~~~~~iG~G~fg--~Vy~~~~~-~~~~vAvK~~~~~~~~---~~~~~~E~~~l~~l~HpnIv~~~g~~~~----- 79 (272)
T d1qpca_ 11 PRETLKLVERLGAGQFG--EVWMGYYN-GHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVVTQ----- 79 (272)
T ss_dssp CGGGEEEEEEEEEETTE--EEEEEEET-TTEEEEEEEECTTSSC---HHHHHHHHHHHHHCCCTTBCCEEEEECS-----
T ss_pred CHHHeEEeEEEecCCCc--EEEEEEEC-CCCEEEEEEEccCcCC---HHHHHHHHHHHHhCCCCCEeEEEeeecc-----
Confidence 445789999999998 8 99999986 6788999999764332 3468899999999999999999998753
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+||||||| ++|.+++....... .....+..++.||+.||.|||+ .+++||||||+||+|+.+|.+||+||
T Consensus 80 ----~~~~iv~Ey~~~g~L~~~~~~~~~~~-l~~~~~~~i~~qi~~gl~~lH~-~~ivHrDiKp~NIll~~~~~~Kl~DF 153 (272)
T d1qpca_ 80 ----EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEE-RNYIHRDLRAANILVSDTLSCKIADF 153 (272)
T ss_dssp ----SSCEEEEECCTTCBHHHHTTSHHHHT-CCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEECTTSCEEECCC
T ss_pred ----CCeEEEEEeCCCCcHHHHHhhcCCCC-CCHHHHHHHHHHHHHHHHHHHh-CCcccCccchhheeeecccceeeccc
Confidence 2579999999 57888764432111 1233455669999999999997 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCC-CCCChhhh------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM-RLSKTEEL------ 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~-~p~~~~~l------ 246 (771)
|+++........ ......++..|+|||++.++ .++.++|||||||++|||++|+ +++.....
T Consensus 154 Gla~~~~~~~~~-----~~~~~~gt~~y~APE~~~~~------~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~ 222 (272)
T d1qpca_ 154 GLARLIEDNEYT-----AREGAKFPIKWTAPEAINYG------TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 222 (272)
T ss_dssp TTCEECSSSCEE-----CCTTCCCCTTTSCHHHHHHC------EECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHH
T ss_pred cceEEccCCccc-----cccccCCcccccChHHHhCC------CCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 999877543211 11122344589999998763 5678999999999999999965 44432211
Q ss_pred -------hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 247 -------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 247 -------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.....+|+.+.+++.+||+.+|.+|||+.++++
T Consensus 223 i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~ 262 (272)
T d1qpca_ 223 LERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRS 262 (272)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHhcCCCCCcccChHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence 112457888999999999999999999999876
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.8e-38 Score=328.39 Aligned_cols=238 Identities=16% Similarity=0.175 Sum_probs=178.9
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCC---CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDG---SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g---~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~ 92 (771)
+..+|++++.||.|+ | +||+|+++.++ ..|+||++... ..+...+.+.+|+++|++|+||||+++++++..
T Consensus 5 ~~~~~~l~~~iG~G~fg--~Vy~a~~~~~~~~~~~vaik~~~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-- 79 (273)
T d1mp8a_ 5 QRERIELGRCIGEGQFG--DVHQGIYMSPENPALAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-- 79 (273)
T ss_dssp CGGGEEEEEEEEECSSS--EEEEEEECCC--CCEEEEEEECTTT-TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS--
T ss_pred CHHHeEEEEEEeeCCCc--EEEEEEEecCCceeEEEEEEEeccc-cCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec--
Confidence 345799999999999 9 99999987654 35788887543 233456778999999999999999999999853
Q ss_pred cCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEE
Q 004157 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL 170 (771)
..+||||||| ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||
T Consensus 80 -------~~~~iv~E~~~~g~l~~~~~~~~~~--l~~~~~~~~~~qi~~gl~ylH~-~~iiHrDlKp~NIll~~~~~~Kl 149 (273)
T d1mp8a_ 80 -------NPVWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYLES-KRFVHRDIAARNVLVSSNDCVKL 149 (273)
T ss_dssp -------SSCEEEEECCTTEEHHHHHHHTTTT--SCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEEEETTEEEE
T ss_pred -------CeEEEEEEeccCCcHHhhhhccCCC--CCHHHHHHHHHHHHHHhhhhcc-cCeeccccchhheeecCCCcEEE
Confidence 2689999999 5688877654321 2344466679999999999997 89999999999999999999999
Q ss_pred EccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh---
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL--- 246 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l--- 246 (771)
+|||+++....... .......++..|+|||++.+ ..++.++|||||||++|||++ |.+|+.....
T Consensus 150 ~DfG~a~~~~~~~~-----~~~~~~~gt~~y~apE~l~~------~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~ 218 (273)
T d1mp8a_ 150 GDFGLSRYMEDSTY-----YKASKGKLPIKWMAPESINF------RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV 218 (273)
T ss_dssp CC------------------------CCGGGCCHHHHHH------CCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH
T ss_pred ccchhheeccCCcc-----eeccceecCcccchhhHhcc------CCCCCccccccchHHHHHHHhcCCCCCCCCCHHHH
Confidence 99999987654211 11122233458999999876 467789999999999999997 7777754321
Q ss_pred ----------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 ----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 ----------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....+|..+.+++.+||+.+|.+|||+.+++++
T Consensus 219 ~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~ 262 (273)
T d1mp8a_ 219 IGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ 262 (273)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 1124577889999999999999999999999865
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-37 Score=325.89 Aligned_cols=240 Identities=15% Similarity=0.168 Sum_probs=179.1
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCC----CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEec
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDG----SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g----~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e 91 (771)
....|++++.||.|+ | +||+|+.+.++ ..||||++..... +.....+.+|+++|++|+||||+++++++...
T Consensus 5 ~~~~~~~~~~iG~G~fG--~Vy~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~ 81 (283)
T d1mqba_ 5 HPSCVTRQKVIGAGEFG--EVYKGMLKTSSGKKEVPVAIKTLKAGYT-EKQRVDFLGEAGIMGQFSHHNIIRLEGVISKY 81 (283)
T ss_dssp CTTTEEEEEEEEECSSS--EEEEEEEEC---CCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred CHHHeEeeeEEeeCCCe--EEEEEEEeCCCCEEEEEEEEEEECcccC-hHHHHHHHHHHHHHHhcCCCCEeeeeEEEecC
Confidence 344699999999999 9 99999988665 3699999976433 33456788999999999999999999999763
Q ss_pred ccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEE
Q 004157 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWK 169 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~K 169 (771)
..+|+||||| +.|.+.+...... .....+..++.||+.||.|||+ .+|+||||||+||+|+.+|.+|
T Consensus 82 --------~~~~~v~e~~~~~~l~~~~~~~~~~--~~~~~~~~i~~~i~~gl~~lH~-~~iiHrDlKp~NILl~~~~~~K 150 (283)
T d1mqba_ 82 --------KPMMIITEYMENGALDKFLREKDGE--FSVLQLVGMLRGIAAGMKYLAN-MNYVHRDLAARNILVNSNLVCK 150 (283)
T ss_dssp --------SSEEEEEECCTTEEHHHHHHHTTTC--SCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEECTTCCEE
T ss_pred --------CceEEEEEecccCcchhhhhccccc--ccHHHHHHHHHHHHHhhhhccc-cccccCccccceEEECCCCeEE
Confidence 3789999999 4577766654321 2233455669999999999997 8999999999999999999999
Q ss_pred EEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCC-CChhh---
Q 004157 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL-SKTEE--- 245 (771)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p-~~~~~--- 245 (771)
|+|||+++........ ........++..|+|||++.+ ..++.++|||||||++|||++++.+ +....
T Consensus 151 l~DFGla~~~~~~~~~---~~~~~~~~gt~~Y~APE~l~~------~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~ 221 (283)
T d1mqba_ 151 VSDFGLSRVLEDDPEA---TYTTSGGKIPIRWTAPEAISY------RKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE 221 (283)
T ss_dssp ECCCCC--------------------CCCGGGSCHHHHHS------CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH
T ss_pred EcccchhhcccCCCcc---ceEeccCCCCccccCHHHHcc------CCCCCcccccccHHHHHHHHhCCCCccccCCHHH
Confidence 9999999876542211 111112233458999999876 4677899999999999999996544 33211
Q ss_pred h----------hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 246 L----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 246 l----------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
+ .....+|..+.+++.+||+.+|.+||++.++++
T Consensus 222 ~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~ 265 (283)
T d1mqba_ 222 VMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVS 265 (283)
T ss_dssp HHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHHHHhccCCCCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHH
Confidence 1 112456778999999999999999999999875
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.2e-37 Score=330.20 Aligned_cols=239 Identities=16% Similarity=0.196 Sum_probs=183.3
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCC----cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEec
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGS----PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~----~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e 91 (771)
+...|++.+.||+|+ | +||+|+++.+|+ +|+||++.... .....+.+.+|+++|++|+||||+++++++.++
T Consensus 7 k~~dy~~~~~lG~G~fG--~Vy~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~ 83 (317)
T d1xkka_ 7 KETEFKKIKVLGSGAFG--TVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTS 83 (317)
T ss_dssp CTTTEEEEEEEEECSSE--EEEEEEECC----CCEEEEEEEECC-----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred CHHHCEEeeEEecCCCe--EEEEEEEcCCCCEEEEEEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence 345699999999999 9 999999998887 57888776432 223456789999999999999999999999753
Q ss_pred ccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEE
Q 004157 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWK 169 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~K 169 (771)
..|+++|++ ++|.+.+...... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+|
T Consensus 84 ---------~~~~v~e~~~~~~l~~~~~~~~~~--~~~~~~~~i~~qi~~gl~yLH~-~~iiHrDlKp~NIll~~~~~~k 151 (317)
T d1xkka_ 84 ---------TVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNYLED-RRLVHRDLAARNVLVKTPQHVK 151 (317)
T ss_dssp ---------SEEEEEECCTTCBHHHHHHHTSSS--CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEEEETTEEE
T ss_pred ---------CeeEEEEeccCCcccccccccccC--CCHHHHHHHHHHHHHHHHHHHH-cCcccCcchhhcceeCCCCCeE
Confidence 457777877 5788877765322 2234455669999999999997 8999999999999999999999
Q ss_pred EEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhhh-
Q 004157 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR- 247 (771)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l~- 247 (771)
|+|||+++........ .......++..|+|||++.+ ..++.++|||||||++|||++ |.+||......
T Consensus 152 l~DFGla~~~~~~~~~----~~~~~~~gt~~y~APE~l~~------~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~ 221 (317)
T d1xkka_ 152 ITDFGLAKLLGAEEKE----YHAEGGKVPIKWMALESILH------RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 221 (317)
T ss_dssp ECCCSHHHHTTTTCC------------CCTTTSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGG
T ss_pred eeccccceeccccccc----ccccccccCccccChHHHhc------CCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHH
Confidence 9999999876543211 11122234568999999876 367889999999999999998 67777542211
Q ss_pred ------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 ------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 ------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
....+|..+.+++.+||+.+|.+||++.+++++
T Consensus 222 ~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~ 266 (317)
T d1xkka_ 222 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 266 (317)
T ss_dssp HHHHHHHTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHcCCCCCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHH
Confidence 113467789999999999999999999999876
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.8e-37 Score=333.72 Aligned_cols=244 Identities=18% Similarity=0.230 Sum_probs=188.7
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
-+|++.++||.|+ | +||+|.++.+|+.||||++.+..........+.+|+++|++++||||+++++++..+... .
T Consensus 17 ~~Y~i~~~LG~G~fg--~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~--~ 92 (355)
T d2b1pa1 17 KRYQNLKPIGSGAQG--IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL--E 92 (355)
T ss_dssp TTEEEEEECSCC--C--EEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCST--T
T ss_pred CCeEEEEEeecCcCe--EEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEeccccc--c
Confidence 3699999999999 9 999999999999999999998766666677899999999999999999999999754310 1
Q ss_pred cccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+++||||||| ++|...+... .....++.++.||+.||.|||+ .||+||||||+||+++.++.+|++|||++
T Consensus 93 ~~~~~~iv~Ey~~~~l~~~~~~~-----~~~~~i~~~~~qil~gl~~LH~-~giiHrDlKP~Nil~~~~~~~kl~df~~~ 166 (355)
T d2b1pa1 93 EFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLA 166 (355)
T ss_dssp TCCEEEEEEECCSEEHHHHHTSC-----CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEECTTCCEEECCCCC-
T ss_pred cCceeEEEEeccchHHHHhhhcC-----CCHHHHHHHHHHHHHHHHHhhh-cccccccCCccccccccccceeeechhhh
Confidence 146999999999 5666655321 2345577789999999999997 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh---------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--------- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~--------- 247 (771)
+...... ......++..|+|||++.+ ..++.++||||+||++|+|++|.+||...+..
T Consensus 167 ~~~~~~~-------~~~~~~~t~~y~aPE~l~~------~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~ 233 (355)
T d2b1pa1 167 RTAGTSF-------MMTPYVVTRYYRAPEVILG------MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 233 (355)
T ss_dssp ---------------------CCTTCCHHHHTT------CCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred hcccccc-------ccccccccccccChhhhcC------CCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHh
Confidence 7654421 1222345669999999876 46778999999999999999999988432100
Q ss_pred ---------------------cc------------------------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 248 ---------------------NT------------------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 248 ---------------------~~------------------------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
.. ..++..+.+++++||..||++|||++++|+| +
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H-p 312 (355)
T d2b1pa1 234 LGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH-P 312 (355)
T ss_dssp HCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS-T
T ss_pred ccCCCHHHHHHhhhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC-c
Confidence 00 0012346788999999999999999999999 5
Q ss_pred CCcc
Q 004157 283 YFQN 286 (771)
Q Consensus 283 fF~n 286 (771)
||+.
T Consensus 313 w~~~ 316 (355)
T d2b1pa1 313 YINV 316 (355)
T ss_dssp TTGG
T ss_pred ccCC
Confidence 6653
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=2.5e-37 Score=333.30 Aligned_cols=235 Identities=17% Similarity=0.237 Sum_probs=188.2
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccCcC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d~~ 96 (771)
.+|++.++||.|+ | +||+|+++.+|+.||||++... ..+.+++|+++|++|+ ||||++++++++...
T Consensus 35 d~y~i~~~LG~G~fg--~V~~a~~~~~~~~vAiK~i~~~-----~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~---- 103 (328)
T d3bqca1 35 DDYQLVRKLGRGKYS--EVFEAINITNNEKVVVKILKPV-----KKKKIKREIKILENLRGGPNIITLADIVKDPV---- 103 (328)
T ss_dssp GGEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEECSS-----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTT----
T ss_pred cCeEEEEEEecCcCe--EEEEEEECCCCCEEEEEEECHH-----HHHHHHHHHHHHHhccCCCCCcEEEEEEEecC----
Confidence 4699999999998 8 9999999999999999999753 2346789999999996 999999999998654
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC-cEEEEcc
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL-DWKLHAF 173 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G-~~KL~dF 173 (771)
..++|+||||| ++|....+ ......++.++.||+.||.|||+ .||+||||||+||+|+.++ .+||+||
T Consensus 104 --~~~~~~v~e~~~~~~L~~~~~------~l~e~~i~~i~~qil~aL~~LH~-~gIvHrDiKp~NILi~~~~~~vkl~DF 174 (328)
T d3bqca1 104 --SRTPALVFEHVNNTDFKQLYQ------TLTDYDIRFYMYEILKALDYCHS-MGIMHRDVKPHNVMIDHEHRKLRLIDW 174 (328)
T ss_dssp --TCSEEEEEECCCSCBGGGTTT------SCCHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEEETTTTEEEECCG
T ss_pred --CCceeEEEeecCCCcHHHHhc------CCCHHHHHHHHHHHHHHHHHHhh-cccccccccccceEEcCCCCeeeeccc
Confidence 34799999999 35654432 13345577889999999999997 9999999999999998765 5999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh--h-----
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE--L----- 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~--l----- 246 (771)
|++........ .....++..|+|||.+.+. ..++.++|+|||||++|++++|..||.... .
T Consensus 175 G~a~~~~~~~~-------~~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~ 242 (328)
T d3bqca1 175 GLAEFYHPGQE-------YNVRVASRYFKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 242 (328)
T ss_dssp GGCEECCTTCC-------CCSCCSCGGGCCHHHHTTC-----CCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHH
T ss_pred ccceeccCCCc-------ccccccCccccCcccccCC-----CCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHH
Confidence 99987654321 1122445689999998764 456789999999999999999998763210 0
Q ss_pred -------------------------h------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCC
Q 004157 247 -------------------------R------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEY 283 (771)
Q Consensus 247 -------------------------~------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~f 283 (771)
. ....+++.+.+++++||..||.+|||++++|+| +|
T Consensus 243 i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~H-p~ 321 (328)
T d3bqca1 243 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH-PY 321 (328)
T ss_dssp HHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTS-GG
T ss_pred HHHHHCCchhhhhhhhcccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcC-cc
Confidence 0 001245668899999999999999999999998 67
Q ss_pred Ccc
Q 004157 284 FQN 286 (771)
Q Consensus 284 F~n 286 (771)
|++
T Consensus 322 F~~ 324 (328)
T d3bqca1 322 FYT 324 (328)
T ss_dssp GTT
T ss_pred cCC
Confidence 765
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.9e-37 Score=331.83 Aligned_cols=243 Identities=17% Similarity=0.275 Sum_probs=191.3
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.+|++.++||.|+ | +||+|+++.+|+.||||++.+........+.+.+|+++|++|+||||+++++++...... .
T Consensus 18 ~rY~i~~~LG~G~fg--~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~--~ 93 (348)
T d2gfsa1 18 ERYQNLSPVGSGAYG--SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSL--E 93 (348)
T ss_dssp TTEEEEEECGGGTTS--SEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSST--T
T ss_pred CCeEEEEEEecCCCe--EEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeecccc--c
Confidence 4799999999999 9 999999999999999999987666656677889999999999999999999998643210 0
Q ss_pred cccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
....+|+++|++ ++|.+++....+ ....++.++.||+.||.|||+ +||+||||||+||+++.+|..|++|||++
T Consensus 94 ~~~~~~i~~~~~gg~L~~~~~~~~l----~e~~~~~i~~qil~aL~~LH~-~giiHrDiKp~NILi~~~~~~kl~dfg~a 168 (348)
T d2gfsa1 94 EFNDVYLVTHLMGADLNNIVKCQKL----TDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLA 168 (348)
T ss_dssp TCCCCEEEEECCSEEHHHHHTTCCC----CHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEECTTCCEEECCC---
T ss_pred cCceEEEEEeecCCchhhhcccccc----cHHHHHHHHHHHHHHHHHHHh-CCCcccccCCccccccccccccccccchh
Confidence 123566666666 579998865443 345577789999999999997 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh---------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--------- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~--------- 247 (771)
...... .....++..|+|||+..+. ..++.++|+|||||++|+|++|.+||...+..
T Consensus 169 ~~~~~~---------~~~~~g~~~y~apE~~~~~-----~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~ 234 (348)
T d2gfsa1 169 RHTDDE---------MTGYVATRWYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 234 (348)
T ss_dssp -CCTGG---------GSSSCHHHHTSCHHHHTTC-----SCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred cccCcc---------cccccccccccCchhhcCC-----ccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 765431 1122344589999987653 35678999999999999999999998532100
Q ss_pred ----------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 ----------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 ----------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
....++..+.+++.+||..||.+|||+.++|+| +||+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~H-p~f~ 305 (348)
T d2gfsa1 235 VGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH-AYFA 305 (348)
T ss_dssp HCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS-GGGT
T ss_pred cCCCChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcC-HhhC
Confidence 012466778899999999999999999999999 5554
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.5e-37 Score=324.31 Aligned_cols=236 Identities=18% Similarity=0.181 Sum_probs=179.8
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
+...+|++++.||+|+ | +||+|+++. ++.||||++...... .+.+.+|+.++++++||||+++++++..+
T Consensus 14 i~~~~~~i~~~iG~G~fg--~Vy~~~~~~-~~~vAiK~l~~~~~~---~~~~~~E~~~l~~l~h~nIv~~~g~~~~~--- 84 (285)
T d1fmka3 14 IPRESLRLEVKLGQGCFG--EVWMGTWNG-TTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSEE--- 84 (285)
T ss_dssp CCGGGEEEEEEEEECSSC--EEEEEEETT-TEEEEEEECCTTSSC---HHHHHHHHHHHHHCCCTTBCCEEEEECSS---
T ss_pred cCHHHEEEeeEEeeCCCe--EEEEEEECC-CCEEEEEEECcccCC---HHHHHHHHHHHHhcccCCEeEEEEEEecC---
Confidence 4445799999999999 9 999999875 467999999754332 35688999999999999999999988532
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
.+|+||||| ++|..++....... .....+..++.||+.||+|||+ .+++||||||+||+|+.+|.+||+|
T Consensus 85 ------~~~lv~Ey~~~g~l~~~~~~~~~~~-l~~~~~~~i~~~i~~gl~~LH~-~~ivH~DlKp~NIll~~~~~~kl~D 156 (285)
T d1fmka3 85 ------PIYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER-MNYVHRDLRAANILVGENLVCKVAD 156 (285)
T ss_dssp ------SCEEEECCCTTCBHHHHHSHHHHTT-CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEECGGGCEEECC
T ss_pred ------CeEEEEEecCCCchhhhhhhccccc-chHHHHHHHHHHHHHHHHHHhh-hheecccccceEEEECCCCcEEEcc
Confidence 479999999 56887775432111 2233456679999999999997 8999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCC-Chhh------
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLS-KTEE------ 245 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~-~~~~------ 245 (771)
||+++....... .......++..|+|||++.. ..++.++|||||||++|||++|+.++ ....
T Consensus 157 fGla~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~------~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~ 225 (285)
T d1fmka3 157 FGLARLIEDNEY-----TARQGAKFPIKWTAPEAALY------GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD 225 (285)
T ss_dssp CCTTC-------------------CCGGGSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHH
T ss_pred cchhhhccCCCc-----eeeccccccccccChHHHhC------CCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 999986643211 11122234558999999876 46778999999999999999966543 3211
Q ss_pred -h------hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 246 -L------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 246 -l------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
+ .....+|+.+.+++.+||+.+|++||+++++++
T Consensus 226 ~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~ 266 (285)
T d1fmka3 226 QVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 266 (285)
T ss_dssp HHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHhcCCCCCCcccCHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence 1 112457788999999999999999999999875
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5e-37 Score=320.72 Aligned_cols=231 Identities=18% Similarity=0.218 Sum_probs=178.2
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
...|++++.||.|+ | +||+|+.+ |+.||||+++.+. ..+.+++|++++++|+||||+++++++..+
T Consensus 6 ~~~~~~~~~lG~G~fg--~Vy~~~~~--~~~vAvK~i~~~~----~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~----- 72 (262)
T d1byga_ 6 MKELKLLQTIGKGEFG--DVMLGDYR--GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEE----- 72 (262)
T ss_dssp GGGEEEEEEEEECSSC--EEEEEEET--TEEEEEEECCCCC------HHHHHTHHHHTTCCCTTBCCEEEEECCC-----
T ss_pred HHHeEEeEEEecCCCe--EEEEEEEC--CeEEEEEEECcHH----HHHHHHHHHHHHHhCCCCCEeeEEEEEEec-----
Confidence 34689999999999 9 99999985 7899999997542 345688999999999999999999987532
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
...+||||||+ ++|.++|....... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 73 --~~~~~lv~ey~~~g~L~~~l~~~~~~~-l~~~~~~~i~~~i~~al~ylH~-~~ivH~dlkp~Nil~~~~~~~kl~dfg 148 (262)
T d1byga_ 73 --KGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEG-NNFVHRDLAARNVLVSEDNVAKVSDFG 148 (262)
T ss_dssp ----CCEEEECCCTTEEHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEECTTSCEEECCCC
T ss_pred --CCcEEEEEeccCCCCHHHHHHhcCCCC-CCHHHHHHHHHHHHhhcccccc-CceeccccchHhheecCCCCEeecccc
Confidence 23689999999 57999987643111 1233355669999999999997 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhhh------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR------ 247 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l~------ 247 (771)
+++...... .....+..|+|||++.+ ..++.++|||||||++|||++ |.+|+......
T Consensus 149 ~s~~~~~~~---------~~~~~~~~y~aPE~l~~------~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i 213 (262)
T d1byga_ 149 LTKEASSTQ---------DTGKLPVKWTAPEALRE------KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV 213 (262)
T ss_dssp C---------------------CCTTTSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHH
T ss_pred cceecCCCC---------ccccccccCCChHHHhC------CCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHH
Confidence 998654321 11233458999999876 367789999999999999998 56666542211
Q ss_pred -------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 -------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 -------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
....+|+.+.+++.+||..||.+|||+.+++++
T Consensus 214 ~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~ 253 (262)
T d1byga_ 214 EKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ 253 (262)
T ss_dssp TTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HcCCCCCCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence 124567789999999999999999999998764
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.2e-36 Score=324.31 Aligned_cols=241 Identities=15% Similarity=0.137 Sum_probs=189.0
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECC-----CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEe
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKD-----DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~-----~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~ 90 (771)
+..+|++.++||+|+ | +||+|+.+. +++.||||++.... .....+.+.+|+++|++|+||||+++++++..
T Consensus 11 p~~~~~~~~~lG~G~fG--~Vy~a~~~~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~ 87 (301)
T d1lufa_ 11 PRNNIEYVRDIGEGAFG--RVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDNPNIVKLLGVCAV 87 (301)
T ss_dssp CGGGCEEEEEEEECSSC--EEEEEEEETSSTTSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred CHHHcEEeEEEeeCCCe--EEEEEEECCCccCCCCeEEEEEEEChhc-ChHHHHHHHHHHHHHHhcCCCCcccceeeecc
Confidence 445699999999999 9 999999763 56789999987543 33456778999999999999999999999986
Q ss_pred cccCcCCcccEEEEEecCC--cchHHHHHHhCCCC---------------------CCcHHHHHHHHHHHHHHHHHHHcC
Q 004157 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLEG---------------------SQRDEYYAWGLNQIAKAVSFLNND 147 (771)
Q Consensus 91 e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~---------------------~~~~~~i~~gl~QI~~aL~fLH~~ 147 (771)
. ...|+||||+ ++|.++|....... ......+..++.||+.||+|||+
T Consensus 88 ~--------~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~- 158 (301)
T d1lufa_ 88 G--------KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE- 158 (301)
T ss_dssp S--------SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH-
T ss_pred C--------CceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhccc-
Confidence 3 3789999999 58999997643210 11223355669999999999997
Q ss_pred CCceecCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHH
Q 004157 148 CKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGL 227 (771)
Q Consensus 148 ~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SL 227 (771)
.++|||||||+||+++.+|.+||+|||+++......... ......++..|+|||++.+ ..++.++|||||
T Consensus 159 ~~ivHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~------~~~t~ksDVwS~ 228 (301)
T d1lufa_ 159 RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK----ADGNDAIPIRWMPPESIFY------NRYTTESDVWAY 228 (301)
T ss_dssp TTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC--------CCBCGGGCCHHHHHH------CCCCHHHHHHHH
T ss_pred CCeEeeEEcccceEECCCCcEEEccchhheeccCCcccc----ccCCCCcCcCcCCHHHHcc------CCCChhhhhccc
Confidence 899999999999999999999999999998664422111 0112233458999999886 467789999999
Q ss_pred HHHHHHHhhCC-CCCChhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 228 GCLIYELFSGM-RLSKTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 228 G~li~el~~g~-~p~~~~~l~-------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
||++|||++|. +||...... ....+|..+.+++.+||+.+|++|||+.++++
T Consensus 229 Gvvl~ell~~~~~p~~~~~~~e~~~~v~~~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~ 294 (301)
T d1lufa_ 229 GVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHR 294 (301)
T ss_dssp HHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hhhHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 99999999985 566432211 12357788999999999999999999999864
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.6e-37 Score=320.90 Aligned_cols=238 Identities=13% Similarity=0.174 Sum_probs=178.5
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCC-C--CcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDD-G--SPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~-g--~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
-.|++.+.||.|+ | +||+|+.+.+ + ..||||++.+.... +...+.+.+|+++|++|+||||+++++++++.
T Consensus 8 ~d~~~~~~iG~G~fg--~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~-- 83 (273)
T d1u46a_ 8 KDLRLLEKLGDGSFG--VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP-- 83 (273)
T ss_dssp GGEEEEEECC----C--CCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS--
T ss_pred HHeEEEEEEecCCCe--EEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeec--
Confidence 4599999999999 9 9999987543 3 36899998765432 34567789999999999999999999999742
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEE
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~ 171 (771)
.+|+||||| ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.++.+||+
T Consensus 84 -------~~~lv~e~~~~~~l~~~~~~~~~~--l~~~~~~~~~~qi~~gl~ylH~-~~iiHrDikp~NIll~~~~~vkl~ 153 (273)
T d1u46a_ 84 -------PMKMVTELAPLGSLLDRLRKHQGH--FLLGTLSRYAVQVAEGMGYLES-KRFIHRDLAARNLLLATRDLVKIG 153 (273)
T ss_dssp -------SCEEEEECCTTCBHHHHHHHHGGG--SCHHHHHHHHHHHHHHHHHHHH-TTEECSCCCGGGEEEEETTEEEEC
T ss_pred -------chheeeeeecCcchhhhhhcccCC--CCHHHHHHHHHHHHHHHHHhhh-CCEeeeeecHHHhccccccceeec
Confidence 579999999 5777776654311 2334456679999999999997 899999999999999999999999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh----
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL---- 246 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l---- 246 (771)
|||+++......... ........+..|+|||++.+. .++.++|||||||++|||++ |.+||.....
T Consensus 154 DfGl~~~~~~~~~~~---~~~~~~~~~~~~~aPE~~~~~------~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~ 224 (273)
T d1u46a_ 154 DFGLMRALPQNDDHY---VMQEHRKVPFAWCAPESLKTR------TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL 224 (273)
T ss_dssp CCTTCEECCC-CCEE---EC-----CCGGGCCHHHHHHC------EEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH
T ss_pred cchhhhhcccCCCcc---eecCccccCcccCCHHHHhCC------CCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHH
Confidence 999999875532111 111112234489999999863 56678999999999999997 7888854321
Q ss_pred ----------hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 247 ----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 247 ----------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.....+|..+.+++.+||+.+|++|||+.++++
T Consensus 225 ~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~ 267 (273)
T d1u46a_ 225 HKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD 267 (273)
T ss_dssp HHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 112467888999999999999999999998753
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-36 Score=323.90 Aligned_cols=236 Identities=13% Similarity=0.167 Sum_probs=185.2
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCC--cEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGS--PVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~--~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d~ 95 (771)
.|++++.||.|+ | +||+|+++.+|. .|+||.+...... ...+.+.+|+++|+++ +||||+++++++.++
T Consensus 11 ~~~~~~~iG~G~fg--~Vy~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~---- 83 (309)
T d1fvra_ 11 DIKFQDVIGEGNFG--QVLKARIKKDGLRMDAAIKRMKEYASK-DDHRDFAGELEVLCKLGHHPNIINLLGACEHR---- 83 (309)
T ss_dssp GCEEEEEEECGGGC--EEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEET----
T ss_pred HcEEEEEEeeCCCc--EEEEEEECCCCeEEEEEEEEECcccCh-HHHHHHHHHHHHHHhccCCCCEeeEEEEEecC----
Confidence 689999999999 9 999999998886 4778887643322 3456788999999999 799999999999874
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhC-------------CCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCE
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELG-------------LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSV 160 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~-------------~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI 160 (771)
..+||||||| ++|.++|.... .........+..++.||+.||.|||+ .+++||||||+||
T Consensus 84 ----~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~-~~iiHrDlkp~NI 158 (309)
T d1fvra_ 84 ----GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ-KQFIHRDLAARNI 158 (309)
T ss_dssp ----TEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGE
T ss_pred ----CeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhc-CCccccccccceE
Confidence 4899999999 68999997642 11222334456679999999999997 8999999999999
Q ss_pred EEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCC-C
Q 004157 161 VVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM-R 239 (771)
Q Consensus 161 ~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~-~ 239 (771)
|++.++.+||+|||+++....... .....++..|+|||.+.+ ..++.++|||||||++|||++|. +
T Consensus 159 L~~~~~~~kl~DfG~a~~~~~~~~-------~~~~~gt~~y~aPE~l~~------~~~~~~sDvwSfGvil~ell~~~~~ 225 (309)
T d1fvra_ 159 LVGENYVAKIADFGLSRGQEVYVK-------KTMGRLPVRWMAIESLNY------SVYTTNSDVWSYGVLLWEIVSLGGT 225 (309)
T ss_dssp EECGGGCEEECCTTCEESSCEECC-------C----CCTTTCCHHHHHH------CEECHHHHHHHHHHHHHHHHTTSCC
T ss_pred EEcCCCceEEcccccccccccccc-------ccceecCCcccchHHhcc------CCCCccceeehhHHHHHHHHhcCCC
Confidence 999999999999999976543211 112234568999999976 35678999999999999999976 4
Q ss_pred CCChhhh-------h------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 240 LSKTEEL-------R------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 240 p~~~~~l-------~------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
||..... . ....+|+.+.+++.+||+.+|++||++.+++++
T Consensus 226 p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~ 279 (309)
T d1fvra_ 226 PYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 279 (309)
T ss_dssp TTTTCCHHHHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHHHhcCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 5643221 1 114577889999999999999999999999875
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8e-37 Score=328.74 Aligned_cols=244 Identities=16% Similarity=0.259 Sum_probs=192.1
Q ss_pred CCceecCCCCCCC-CceEEEEeEE---CCCCCcEEEEEEeCCCC--chhHHHHHHHHHHHHhcCCC-CCeeEEeeeEEec
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTS---KDDGSPVSIFSISGTNA--QDGHLAAARNGVKRLRTVRH-PNILAFLHSTEVE 91 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~---k~~g~~VaIK~~~~~~~--~~~~~~~~~~ei~~Lk~LrH-PnIlkv~d~~e~e 91 (771)
.+|++++.||+|+ | +||+|++ +.+|+.||||++.+... +....+.+.+|+++|++++| |||+++++++++.
T Consensus 24 ~~y~~~~~IG~G~fg--~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~ 101 (322)
T d1vzoa_ 24 ENFELLKVLGTGAYG--KVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE 101 (322)
T ss_dssp GGEEEEEEEEETTTE--EEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEET
T ss_pred hceEEEEEEecCCCe--EEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccC
Confidence 4599999999999 8 9999987 45689999999975422 11234567889999999987 8999999999874
Q ss_pred ccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEE
Q 004157 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWK 169 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~K 169 (771)
..+|+||||+ ++|.+++....... ...+...+.||+.||.|||+ .+++||||||+||+++.+|.+|
T Consensus 102 --------~~~~~v~e~~~~~~L~~~i~~~~~~~---e~~~~~~~~Qi~~al~~lH~-~~ivHrDiKp~Nill~~~~~vk 169 (322)
T d1vzoa_ 102 --------TKLHLILDYINGGELFTHLSQRERFT---EHEVQIYVGEIVLALEHLHK-LGIIYRDIKLENILLDSNGHVV 169 (322)
T ss_dssp --------TEEEEEECCCCSCBHHHHHHHHSCCC---HHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEECTTSCEE
T ss_pred --------CceeeeeecccccHHHHHHHhccccc---HHHHHHHHHHHHHHHHHhhc-CCEEeccCCccceeecCCCCEE
Confidence 4899999999 58999998876432 33455568999999999997 8999999999999999999999
Q ss_pred EEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh--
Q 004157 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-- 247 (771)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~-- 247 (771)
|+|||++..+...... ......+...|++||.+.+. ...++.++|||||||++|+|++|..||......
T Consensus 170 L~DFG~a~~~~~~~~~-----~~~~~~g~~~~~~pe~~~~~----~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~ 240 (322)
T d1vzoa_ 170 LTDFGLSKEFVADETE-----RAYDFCGTIEYMAPDIVRGG----DSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS 240 (322)
T ss_dssp ESCSSEEEECCGGGGG-----GGCGGGSCCTTCCHHHHTTC----C---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC
T ss_pred Eeeccchhhhcccccc-----cccccccccccchhHHhhcC----CcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 9999999876542111 11223445689999998653 124567899999999999999999998653211
Q ss_pred --------------ccCCCCcchHHHHHHHhccCCCCCCC-----hHHHhhCCCCCcc
Q 004157 248 --------------NTASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENSEYFQN 286 (771)
Q Consensus 248 --------------~~~~IP~~l~~~i~~lL~~~P~~Rps-----~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||..||.+||+ ++++++| +||+.
T Consensus 241 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~H-pff~~ 297 (322)
T d1vzoa_ 241 QAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH-LFFQK 297 (322)
T ss_dssp HHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS-GGGTT
T ss_pred HHHHHHhcccCCCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcC-HhhcC
Confidence 11346778999999999999999994 7899998 66654
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-36 Score=321.30 Aligned_cols=243 Identities=16% Similarity=0.170 Sum_probs=179.7
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCC-----CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEE
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDD-----GSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTE 89 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~-----g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e 89 (771)
+..+|+++++||.|+ | +||+|+++.. ++.||||++...... ...+.+.+|+..+.++ +||||+.+++++.
T Consensus 11 ~~~~y~~~~~iG~G~fG--~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~-~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~ 87 (299)
T d1ywna1 11 PRDRLKLGKPLGRGAFG--QVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHRALMSELKILIHIGHHLNVVNLLGACT 87 (299)
T ss_dssp CGGGEEEEEEEEECSSC--EEEEEEEESTTSSSCEEEEEEEEC----CH-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cHHHEEEeeEEeecCCe--EEEEEEEcCCCcccCCeEEEEEEEccccCc-HHHHHHHHHHHHHHhhcCCCeEEEeeeeec
Confidence 445799999999999 9 9999997643 467999998754333 3355667788888776 6889999999876
Q ss_pred ecccCcCCcccEEEEEecCC--cchHHHHHHhCC-------------CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecC
Q 004157 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGL-------------EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGN 154 (771)
Q Consensus 90 ~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~-------------~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~d 154 (771)
.+ ...+|+||||| ++|.++|+.... ........+..++.||+.||.|||+ .+|||||
T Consensus 88 ~~-------~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~-~~ivHrD 159 (299)
T d1ywna1 88 KP-------GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS-RKCIHRD 159 (299)
T ss_dssp ST-------TSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHH-TTCCCSC
T ss_pred cC-------CCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHh-CCCcCCc
Confidence 54 24689999999 689999976431 1112234566779999999999997 8999999
Q ss_pred CCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHH
Q 004157 155 VCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYEL 234 (771)
Q Consensus 155 Ikp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el 234 (771)
|||+||+++.+|.+||+|||+++........ .......++..|+|||++.+ ..++.++|||||||++|||
T Consensus 160 lKp~NILl~~~~~~Kl~DFGla~~~~~~~~~----~~~~~~~gt~~y~APE~l~~------~~~~~~sDiwS~Gvil~el 229 (299)
T d1ywna1 160 LAARNILLSEKNVVKICDFGLARDIYKDPDY----VRKGDARLPLKWMAPETIFD------RVYTIQSDVWSFGVLLWEI 229 (299)
T ss_dssp CCGGGEEECGGGCEEECC------CCSCTTS----CCTTSCCCGGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHH
T ss_pred CCccceeECCCCcEEEccCcchhhccccccc----cccCceeeCccccchhHhhc------CCCCcccceeehHHHHHHH
Confidence 9999999999999999999999866543211 11122234458999999876 4677899999999999999
Q ss_pred hhCC-CCCChhh----h----------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 235 FSGM-RLSKTEE----L----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 235 ~~g~-~p~~~~~----l----------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
++|. +||.... + .....+|+.+.+++.+||+.+|.+|||+.++++|
T Consensus 230 lt~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~ 290 (299)
T d1ywna1 230 FSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 290 (299)
T ss_dssp HTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HhCCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 9875 5664321 1 1123567789999999999999999999999986
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6e-36 Score=318.51 Aligned_cols=242 Identities=15% Similarity=0.224 Sum_probs=187.9
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCC-------CcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeee
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDG-------SPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHS 87 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g-------~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~ 87 (771)
+..+|++++.||.|+ | +||+|+.+.++ ..||||++.+.. .+.....+.+|+..++++ +||||++++++
T Consensus 11 ~~~~~~l~~~iG~G~fg--~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~ 87 (299)
T d1fgka_ 11 PRDRLVLGKPLGEGAFG--QVVLAEAIGLDKDKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKNIINLLGA 87 (299)
T ss_dssp CGGGEEEEEECC-------CEEEEEEECC----CCCEEEEEEECCCTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cHHHeEEeeEEeecCCc--EEEEEEEcCCCcccccCceEEEEEEECccc-ChHHHHHHHHHHHHHHHhcCCCeEEecccc
Confidence 456799999999999 9 99999976554 379999997654 334456788899999888 89999999999
Q ss_pred EEecccCcCCcccEEEEEecCC--cchHHHHHHhCCC-------------CCCcHHHHHHHHHHHHHHHHHHHcCCCcee
Q 004157 88 TEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLE-------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVH 152 (771)
Q Consensus 88 ~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~-------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH 152 (771)
+.++ ..+|+||||| ++|.++|...... .......+..+++||+.||+|||+ .++||
T Consensus 88 ~~~~--------~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~-~~ivH 158 (299)
T d1fgka_ 88 CTQD--------GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS-KKCIH 158 (299)
T ss_dssp ECSS--------SSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHH-TTCCC
T ss_pred cccC--------CeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhh-CCEEe
Confidence 9864 3789999999 6899999765421 122345567779999999999997 99999
Q ss_pred cCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHH
Q 004157 153 GNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIY 232 (771)
Q Consensus 153 ~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~ 232 (771)
|||||+||+++.+|..||+|||++.......... .......+..|+|||++.+ ..++.++|||||||++|
T Consensus 159 rDiKp~NiLl~~~~~~kl~dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~l~~------~~y~~k~DiwS~Gvvl~ 228 (299)
T d1fgka_ 159 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK----KTTNGRLPVKWMAPEALFD------RIYTHQSDVWSFGVLLW 228 (299)
T ss_dssp SCCSGGGEEECTTCCEEECSTTCCCCGGGCCTTC----CCTTSCCGGGGSCHHHHHH------CCCCHHHHHHHHHHHHH
T ss_pred eeecccceeecCCCCeEeccchhhcccccccccc----ccccCCCChhhhhhhHhcC------CCCCchhhhHHhHHHHH
Confidence 9999999999999999999999998775432111 1112233458999999876 46788999999999999
Q ss_pred HHhh-CCCCCChhhh-------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 233 ELFS-GMRLSKTEEL-------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 233 el~~-g~~p~~~~~l-------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
||++ |.+||..... .....+|+.+.+++.+||+.+|..|||+.++++.
T Consensus 229 ell~~g~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~ 290 (299)
T d1fgka_ 229 EIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 290 (299)
T ss_dssp HHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HhccCCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence 9998 5777753221 1124577889999999999999999999999863
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-35 Score=316.03 Aligned_cols=242 Identities=15% Similarity=0.179 Sum_probs=186.8
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCC---cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGS---PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~---~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
.+.+++.+.||.|+ | +||+|++..++. .||||+++.. ......+.+.+|+++|++|+||||+++++++...
T Consensus 26 ~~~~~~~~~iG~G~fg--~Vyk~~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~-- 100 (311)
T d1r0pa_ 26 SLIVHFNEVIGRGHFG--CVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS-- 100 (311)
T ss_dssp GEEEEEEEEEEEETTE--EEEEEEECC----CEEEEEEEECCC-CCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEET--
T ss_pred HceeccceEEeecCCe--EEEEEEEECCCCEEEEEEEEEECcc-cCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEec--
Confidence 44556678999998 8 999999876543 5899999753 3445567899999999999999999999997653
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEE
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~ 171 (771)
...+|+||||| ++|.+++....... ....+..++.||+.||.|||+ .+++||||||+||++++++.+||+
T Consensus 101 -----~~~~~lv~E~~~~g~l~~~~~~~~~~~--~~~~~~~i~~qia~gL~~lH~-~~iiHrDLK~~NILl~~~~~~kL~ 172 (311)
T d1r0pa_ 101 -----EGSPLVVLPYMKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKFLAS-KKFVHRDLAARNCMLDEKFTVKVA 172 (311)
T ss_dssp -----TTEEEEEEECCTTCBHHHHHHCTTCCC--BHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEECTTCCEEEC
T ss_pred -----CCceEEEEEEeecCchhhhhccccccc--hHHHHHHHHHHHHHhhhhhcc-cCcccCCccHHhEeECCCCCEEEe
Confidence 23789999999 57888887654322 233345669999999999997 899999999999999999999999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh-hh----
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-EL---- 246 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~-~l---- 246 (771)
|||+++......... ........++..|+|||++.. ..++.++|||||||++|||++|+.|+... ..
T Consensus 173 DFG~~~~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~------~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~ 244 (311)
T d1r0pa_ 173 DFGLARDMYDKEFDS--VHNKTGAKLPVKWMALESLQT------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT 244 (311)
T ss_dssp SSGGGCCTTTTTCCC--TTCTTCSSCCGGGSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCSCC------CH
T ss_pred cccchhhcccccccc--ceecccccccccccChHHHhc------CCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHH
Confidence 999998775432211 111112234458999999876 36788999999999999999977655321 11
Q ss_pred ---------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 ---------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 ---------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....+|+.+.+++.+||+.+|++||++.+++++
T Consensus 245 ~~i~~g~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~ 287 (311)
T d1r0pa_ 245 VYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 287 (311)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHcCCCCCCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 1124567889999999999999999999999875
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.6e-36 Score=317.96 Aligned_cols=244 Identities=13% Similarity=0.166 Sum_probs=180.8
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|.+.++||+|+ | +||+|+. +|+.||||++..+ .........|+..++.++||||+++++++..++.+
T Consensus 4 ~~~l~~~iG~G~fg--~Vy~~~~--~g~~vAvK~~~~~---~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~---- 72 (303)
T d1vjya_ 4 TIVLQESIGKGRFG--EVWRGKW--RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGT---- 72 (303)
T ss_dssp GEEEEEEEECCSSS--EEEEEEE--TTEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSS----
T ss_pred EEEEEEEEeeCCCe--EEEEEEE--CCEEEEEEEECcc---chhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCc----
Confidence 588999999999 8 9999986 5899999999743 22233345677788889999999999999876533
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHc-------CCCceecCCCCCCEEEcCCCcEE
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNN-------DCKLVHGNVCLSSVVVTQTLDWK 169 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~-------~~~ivH~dIkp~NI~v~~~G~~K 169 (771)
...+||||||| ++|.++|++.... ......++.|++.||.|||+ +.+|+||||||+||+|+.+|.+|
T Consensus 73 ~~~~~lv~Ey~~~g~L~~~l~~~~l~----~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~K 148 (303)
T d1vjya_ 73 WTQLWLVSDYHEHGSLFDYLNRYTVT----VEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC 148 (303)
T ss_dssp SEEEEEEEECCTTCBHHHHHHHCCBC----HHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEE
T ss_pred ceEEEEEEecccCCCHHHHHhcCCCC----HHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeE
Confidence 45799999999 6899999876543 23344558999999999996 25899999999999999999999
Q ss_pred EEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----
Q 004157 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE---- 245 (771)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~---- 245 (771)
|+|||++.......... ........++..|+|||++.+........++.++|||||||++|||++|.+++....
T Consensus 149 l~DFGl~~~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~ 226 (303)
T d1vjya_ 149 IADLGLAVRHDSATDTI--DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQL 226 (303)
T ss_dssp ECCCTTCEEEETTTTEE--CC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCC
T ss_pred EEecCccccccCCCcce--eccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCccccccc
Confidence 99999998765432111 111122345569999999876422111124468999999999999999976653211
Q ss_pred --------------hh------cc-CCCCc---------chHHHHHHHhccCCCCCCChHHHhhC
Q 004157 246 --------------LR------NT-ASIPK---------SLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 246 --------------l~------~~-~~IP~---------~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
+. .. ..+|. .+.+++.+||..||.+|||+.+++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~ 291 (303)
T d1vjya_ 227 PYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT 291 (303)
T ss_dssp TTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred chhhcccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence 00 00 12232 36788999999999999999998764
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.3e-34 Score=307.92 Aligned_cols=238 Identities=12% Similarity=0.039 Sum_probs=184.2
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.+|++++.||.|+ | +||+|+++.+|+.||||++..+...+ .+.+|+++++.++|++++..+..+..+
T Consensus 7 ~rY~l~~~iG~G~fG--~Vy~a~~~~~~~~vAvK~~~~~~~~~----~~~~E~~i~~~l~~~~~i~~~~~~~~~------ 74 (299)
T d1ckia_ 7 NRYRLGRKIGSGSFG--DIYLGTDIAAGEEVAIKLECVKTKHP----QLHIESKIYKMMQGGVGIPTIRWCGAE------ 74 (299)
T ss_dssp TTEEEEEEEEECSSS--EEEEEEETTTTEEEEEEEEESCTTSC----CHHHHHHHHHHSTTSTTCCCEEEEEEE------
T ss_pred CEEEEeEEEeeCCCc--EEEEEEECCCCCEEEEEEEchhccCH----HHHHHHHHHHHccCCCcccEEEEEEec------
Confidence 3699999999999 9 99999999999999999988654332 367899999999988766555554433
Q ss_pred cccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC---CCcEEEEcc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ---TLDWKLHAF 173 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~---~G~~KL~dF 173 (771)
....|+||||+ +.|...+..... ......+..++.||+.||+|||+ .+|+||||||+||+++. ++.+||+||
T Consensus 75 -~~~~~ivme~~~~~l~~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~-~~iiHrDiKp~NIl~~~~~~~~~vkl~DF 150 (299)
T d1ckia_ 75 -GDYNVMVMELLGPSLEDLFNFCSR--KFSLKTVLLLADQMISRIEYIHS-KNFIHRDVKPDNFLMGLGKKGNLVYIIDF 150 (299)
T ss_dssp -TTEEEEEEECCCCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHH-TTEECSCCCGGGEEECCGGGTTCEEECCC
T ss_pred -CCEEEEEEEEcCCchhhhhhhccC--CCcHHHHHHHHHHHHHHHHHHHH-CCeeeccCCHhhccccccCCCceeeeecc
Confidence 34889999999 467766655432 12344566779999999999997 89999999999999874 456999999
Q ss_pred CcccccCCCCCCCCCCcccc-ccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh------
Q 004157 174 DVLSEFDGNNEAANGPMLQY-AWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------ 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~-~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l------ 246 (771)
|+++.+.........+.... ...++..|+|||++.+ ..++.++|+|||||++|||++|..||.....
T Consensus 151 G~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~ 224 (299)
T d1ckia_ 151 GLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLG------IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQK 224 (299)
T ss_dssp SSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTT------BCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------
T ss_pred CcceeccccccccceeccccCCcCCCccccCHHHHhC------CCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHH
Confidence 99998765432221122222 2345569999999886 3678899999999999999999998853110
Q ss_pred --------------hccCCCCcchHHHHHHHhccCCCCCCChHHHh
Q 004157 247 --------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLI 278 (771)
Q Consensus 247 --------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL 278 (771)
.....+|+.+.+++.+|++.+|.+||++.++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~ 270 (299)
T d1ckia_ 225 YERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLR 270 (299)
T ss_dssp HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHH
T ss_pred HHHhhcccCCCChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHH
Confidence 01246889999999999999999999987654
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.8e-35 Score=314.05 Aligned_cols=239 Identities=15% Similarity=0.180 Sum_probs=187.5
Q ss_pred CCceecCCCCCCC-CceEEEEeEEC-----CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEec
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSK-----DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVE 91 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k-----~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e 91 (771)
..|++++.||.|+ | +||+|+.+ .+++.||||++.... .......+.+|+.+++++ +||||+++++++++.
T Consensus 23 ~~~~l~~~iG~G~fg--~Vy~a~~~~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~ 99 (311)
T d1t46a_ 23 NRLSFGKTLGAGAFG--KVVEATAYGLIKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLSYLGNHMNIVNLLGACTIG 99 (311)
T ss_dssp GGEEEEEEEEECSSE--EEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HHeEEeeEEeecCCe--EEEEEEEeccccCCCCeEEEEEEECccc-CHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeC
Confidence 4567799999998 8 99999864 456789999998643 334556788999999999 699999999999863
Q ss_pred ccCcCCcccEEEEEecCC--cchHHHHHHhCCC---------------CCCcHHHHHHHHHHHHHHHHHHHcCCCceecC
Q 004157 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLE---------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGN 154 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~---------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~d 154 (771)
..+||||||| ++|.++|...... .......+..++.||+.||+|||+ .++||||
T Consensus 100 --------~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~-~~ivHrD 170 (311)
T d1t46a_ 100 --------GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS-KNCIHRD 170 (311)
T ss_dssp --------SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH-TTCCCSC
T ss_pred --------CEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh-CCeeecc
Confidence 3689999999 5799998765321 112233456679999999999997 8999999
Q ss_pred CCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHH
Q 004157 155 VCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYEL 234 (771)
Q Consensus 155 Ikp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el 234 (771)
|||+||+++.+|..||+|||+++....... ........++..|+|||++.+ ..++.++|||||||++|||
T Consensus 171 LKp~NIl~~~~~~~ki~DfG~~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DIwS~G~~l~el 240 (311)
T d1t46a_ 171 LAARNILLTHGRITKICDFGLARDIKNDSN----YVVKGNARLPVKWMAPESIFN------CVYTFESDVWSYGIFLWEL 240 (311)
T ss_dssp CSGGGEEEETTTEEEECCCGGGSCTTSCTT----SEECSSSEECGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHH
T ss_pred cccccccccccCcccccccchheeccCCCc----ceEeeecccChHHcCHHHhcC------CCCCCcccccchHHHHHHH
Confidence 999999999999999999999987654321 111122334558999999876 3677899999999999999
Q ss_pred hh-CCCCCChhh----hh----------ccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 235 FS-GMRLSKTEE----LR----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 235 ~~-g~~p~~~~~----l~----------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
++ |.+++.... +. ....+|..+.+++.+||+.+|.+||++.++++
T Consensus 241 lt~g~p~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~ 300 (311)
T d1t46a_ 241 FSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300 (311)
T ss_dssp HTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HhCCCCCCCCCCHHHHHHHHHhcCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 98 555553321 11 11457788999999999999999999999875
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=3.6e-34 Score=303.85 Aligned_cols=238 Identities=13% Similarity=0.094 Sum_probs=189.2
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCC-CCeeEEeeeEEecccCc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRH-PNILAFLHSTEVENIDA 95 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrH-PnIlkv~d~~e~e~~d~ 95 (771)
+.+|+|++.||+|+ | +||+|+++.+|+.||||++......+ .+++|++.++.|+| |||+.++++++..
T Consensus 4 g~~Y~i~~~iG~G~fG--~Vy~a~~~~~~~~vAvK~~~~~~~~~----~~~~e~~~~~~l~~~~~i~~~~~~~~~~---- 73 (293)
T d1csna_ 4 GVHYKVGRRIGEGSFG--VIFEGTNLLNNQQVAIKFEPRRSDAP----QLRDEYRTYKLLAGCTGIPNVYYFGQEG---- 73 (293)
T ss_dssp TTTEEEEEEEEECSSC--EEEEEEETTTTEEEEEEEEECCTTSC----CHHHHHHHHHHTTTCTTCCCEEEEEEET----
T ss_pred CCceEEEEEEecCCCe--EEEEEEECCCCCEEEEEEEccccCcH----HHHHHHHHHHHhcCCCCCCEEEEEeecC----
Confidence 45799999999999 9 99999999999999999987653332 36789999999975 8999999998763
Q ss_pred CCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC-----CCcEE
Q 004157 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ-----TLDWK 169 (771)
Q Consensus 96 ~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~-----~G~~K 169 (771)
...|+|||++ ++|.+++...... .....+..++.|++.||.|||+ .|++||||||+||+++. .+.+|
T Consensus 74 ----~~~~~vme~~~~~l~~~~~~~~~~--~~~~~~~~i~~q~~~~l~~lH~-~giiHrDiKp~Nili~~~~~~~~~~vk 146 (293)
T d1csna_ 74 ----LHNVLVIDLLGPSLEDLLDLCGRK--FSVKTVAMAAKQMLARVQSIHE-KSLVYRDIKPDNFLIGRPNSKNANMIY 146 (293)
T ss_dssp ----TEEEEEEECCCCBHHHHHHHTTTC--CCHHHHHHHHHHHHHHHHHHHT-TTEECCCCCGGGEEECCSSSTTTTCEE
T ss_pred ----CccEEEEEecCCCHHHHHHhhccc--hhhHHHHHHHHHHHHHHHHHHH-CCceeccCCccceeecCcccccCCceE
Confidence 4889999999 5788888765432 2344456679999999999996 99999999999999974 67899
Q ss_pred EEccCcccccCCCCCCCCCCccc-cccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh--
Q 004157 170 LHAFDVLSEFDGNNEAANGPMLQ-YAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-- 246 (771)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~-~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-- 246 (771)
|+|||+++.+.........+... ....++..|+|||++.+ ..++.++|+|||||++|||++|..||.....
T Consensus 147 l~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~------~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~ 220 (293)
T d1csna_ 147 VVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLG------REQSRRDDLEALGHVFMYFLRGSLPWQGLKAAT 220 (293)
T ss_dssp ECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTT------CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCC
T ss_pred EcccceeEEcccCccccceeecccCceEEchhhcCHHHhcC------CCCChHHHHHHhhHHHHHHHhCCCcCCCccchh
Confidence 99999998775433222112212 22345569999999876 4678899999999999999999999853210
Q ss_pred -----------------h-ccCCCCcchHHHHHHHhccCCCCCCChHHHh
Q 004157 247 -----------------R-NTASIPKSLLPDYQRLLSSMPSRRLNSSKLI 278 (771)
Q Consensus 247 -----------------~-~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL 278 (771)
. ....+|+.+.+++..|+..+|..||+.+.+.
T Consensus 221 ~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~ 270 (293)
T d1csna_ 221 NKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQ 270 (293)
T ss_dssp HHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHH
T ss_pred HHHHHHHHHhccCCCChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHH
Confidence 0 1146899999999999999999999987654
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4e-35 Score=313.45 Aligned_cols=240 Identities=13% Similarity=0.151 Sum_probs=189.0
Q ss_pred CCceecCCCCCCC-CceEEEEeEECC-----CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecc
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKD-----DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~-----~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~ 92 (771)
.+|+++++||.|+ | +||+|+++. +++.||||+++... .......+.+|++++++++||||+++++++..+
T Consensus 20 ~~~~l~~~lG~G~fG--~Vy~a~~~~~~~~~~~~~VAvK~~~~~~-~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~- 95 (308)
T d1p4oa_ 20 EKITMSRELGQGSFG--MVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG- 95 (308)
T ss_dssp GGEEEEEEEEECSSS--EEEEEEEEEEETTEEEEEEEEEECCTTS-CHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSS-
T ss_pred HHeEEeeEEeeCCCe--EEEEEEECCcccCCCCcEEEEEEECccc-ChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecC-
Confidence 5789999999999 9 999998863 35789999997543 334556788999999999999999999999764
Q ss_pred cCcCCcccEEEEEecCC--cchHHHHHHhC-------CCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEc
Q 004157 93 IDATSTKITIYIVTEPV--MPLSEKIKELG-------LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT 163 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v--~~L~~~L~~~~-------~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~ 163 (771)
..+|+||||| ++|.+++.... .........+..++.||+.||.|||+ ++++||||||+||+++
T Consensus 96 -------~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~-~~ivHrDlk~~NiLld 167 (308)
T d1p4oa_ 96 -------QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA-NKFVHRDLAARNCMVA 167 (308)
T ss_dssp -------SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH-TTCBCSCCSGGGEEEC
T ss_pred -------CceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhh-CCeeeceEcCCceeec
Confidence 3689999999 67988876532 11222344566779999999999997 8999999999999999
Q ss_pred CCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCC-CCCC
Q 004157 164 QTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM-RLSK 242 (771)
Q Consensus 164 ~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~-~p~~ 242 (771)
.++.+||+|||+++....... ........++..|++||.+.+ ..++.++|+|||||++|||++|. +|+.
T Consensus 168 ~~~~~Kl~DFGla~~~~~~~~----~~~~~~~~~t~~y~aPe~l~~------~~~~~~~Dv~S~G~il~El~t~~~~p~~ 237 (308)
T d1p4oa_ 168 EDFTVKIGDFGMTRDIYETDY----YRKGGKGLLPVRWMSPESLKD------GVFTTYSDVWSFGVVLWEIATLAEQPYQ 237 (308)
T ss_dssp TTCCEEECCTTCCCGGGGGGC----EEGGGSSEECGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHHTSCCTTT
T ss_pred CCceEEEeecccceeccCCcc----eeeccceecccccCCHHHHcc------CCCCcccccccHHHHHHHHHhCCCCCCC
Confidence 999999999999986644211 111122234568999999876 35677999999999999999985 6664
Q ss_pred hhhh-------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 243 TEEL-------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 243 ~~~l-------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.... .....+|..+.+++.+||+.+|.+||++.+++++
T Consensus 238 ~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~ 288 (308)
T d1p4oa_ 238 GLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 288 (308)
T ss_dssp TSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCHHHHHHHHHhCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 3221 1124567789999999999999999999998864
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=1.5e-32 Score=299.05 Aligned_cols=243 Identities=16% Similarity=0.191 Sum_probs=183.3
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-----------CCCeeEE
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-----------HPNILAF 84 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-----------HPnIlkv 84 (771)
.+-+|+++++||.|+ | +||+|+++.+|+.||||++.+. ....+.+.+|+++++.++ ||||+++
T Consensus 11 ~~~rY~i~~~LG~G~fg--~Vy~~~~~~~g~~vAvKvi~~~---~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~ 85 (362)
T d1q8ya_ 11 KDARYILVRKLGWGHFS--TVWLAKDMVNNTHVAMKIVRGD---KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKL 85 (362)
T ss_dssp TTTTEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCC
T ss_pred cCCcEEEEEEEeeCCCe--EEEEEEECCCCCEEEEEEEecc---ccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEE
Confidence 345699999999998 8 9999999999999999999753 233456788999888875 5789999
Q ss_pred eeeEEecccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEE
Q 004157 85 LHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV 162 (771)
Q Consensus 85 ~d~~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v 162 (771)
+++++.... ...+++++++ ....................++.++.||+.||.|||+..||+||||||+||++
T Consensus 86 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll 159 (362)
T d1q8ya_ 86 LDHFNHKGP------NGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLM 159 (362)
T ss_dssp CEEEEEEET------TEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEE
T ss_pred EEEeeeccc------cceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeee
Confidence 999987552 3556666655 33333333333333344556788899999999999976899999999999999
Q ss_pred cCCCc------EEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh
Q 004157 163 TQTLD------WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS 236 (771)
Q Consensus 163 ~~~G~------~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~ 236 (771)
+.+|. +||+|||.+....... ....++..|+|||++.+ ..++.++|+|||||++++|++
T Consensus 160 ~~~~~~~~~~~~kl~dfg~s~~~~~~~---------~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlG~il~el~~ 224 (362)
T d1q8ya_ 160 EIVDSPENLIQIKIADLGNACWYDEHY---------TNSIQTREYRSPEVLLG------APWGCGADIWSTACLIFELIT 224 (362)
T ss_dssp EEEETTTTEEEEEECCCTTCEETTBCC---------CSCCSCGGGCCHHHHHT------CCCCTHHHHHHHHHHHHHHHH
T ss_pred eccCcccccceeeEeeccccccccccc---------ccccccccccChhhccc------cCCCccccccchHHHHHHHHH
Confidence 87764 9999999987654321 12234558999999876 467789999999999999999
Q ss_pred CCCCCChhhh--------------h---------------------------cc---------------C----CCCcch
Q 004157 237 GMRLSKTEEL--------------R---------------------------NT---------------A----SIPKSL 256 (771)
Q Consensus 237 g~~p~~~~~l--------------~---------------------------~~---------------~----~IP~~l 256 (771)
|..||..... . .+ . ..++.+
T Consensus 225 g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (362)
T d1q8ya_ 225 GDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEI 304 (362)
T ss_dssp SSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHH
T ss_pred CCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHH
Confidence 9988743210 0 00 0 012346
Q ss_pred HHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 257 LPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 257 ~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
.+++.+||..||.+|||+.++|+| +||++
T Consensus 305 ~dll~~mL~~dP~~Rpta~e~L~H-p~f~~ 333 (362)
T d1q8ya_ 305 SDFLSPMLQLDPRKRADAGGLVNH-PWLKD 333 (362)
T ss_dssp HHHHGGGGCSSTTTCBCHHHHHTC-GGGTT
T ss_pred HHHHHHHCCCChhHCcCHHHHhcC-cccCC
Confidence 778999999999999999999998 67764
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.70 E-value=1.1e-17 Score=164.50 Aligned_cols=133 Identities=15% Similarity=0.080 Sum_probs=101.0
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc----------------hhHHHHHHHHHHHHhcCCCCCeeE
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ----------------DGHLAAARNGVKRLRTVRHPNILA 83 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~----------------~~~~~~~~~ei~~Lk~LrHPnIlk 83 (771)
|.++++||.|+ | +||+|++. +|+.||||++...... ......+.+|+..+.+++|++++.
T Consensus 2 ~~vg~~IG~G~~g--~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~ 78 (191)
T d1zara2 2 DAIGKLMGEGKES--AVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPK 78 (191)
T ss_dssp SEEEEEEEECSSE--EEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCC
T ss_pred chhCCEeeeCcce--EEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcce
Confidence 67899999998 8 99999986 6899999987632110 011234567899999999999998
Q ss_pred EeeeEEecccCcCCcccEEEEEecCCc--chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEE
Q 004157 84 FLHSTEVENIDATSTKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVV 161 (771)
Q Consensus 84 v~d~~e~e~~d~~~~~~~iyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~ 161 (771)
.++... .+++||++. ++.. ..... ...++.||+.+|.|||+ ++++||||||+||+
T Consensus 79 ~~~~~~------------~~lvme~~~~~~~~~------l~~~~----~~~i~~ql~~~l~~lH~-~giiHrDiKP~NIL 135 (191)
T d1zara2 79 VYAWEG------------NAVLMELIDAKELYR------VRVEN----PDEVLDMILEEVAKFYH-RGIVHGDLSQYNVL 135 (191)
T ss_dssp EEEEET------------TEEEEECCCCEEGGG------CCCSC----HHHHHHHHHHHHHHHHH-TTEECSCCSTTSEE
T ss_pred EEEecC------------CEEEEEeeccccccc------hhhHH----HHHHHHHHHHHHHHHhh-CCEEEccCChhhee
Confidence 886532 279999994 2321 11112 23348999999999997 89999999999999
Q ss_pred EcCCCcEEEEccCcccccC
Q 004157 162 VTQTLDWKLHAFDVLSEFD 180 (771)
Q Consensus 162 v~~~G~~KL~dFgla~~~~ 180 (771)
++++| ++|+|||.+....
T Consensus 136 v~~~~-~~liDFG~a~~~~ 153 (191)
T d1zara2 136 VSEEG-IWIIDFPQSVEVG 153 (191)
T ss_dssp EETTE-EEECCCTTCEETT
T ss_pred eeCCC-EEEEECCCcccCC
Confidence 99765 8999999987664
|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Constant regulatory domain of protein phosphatase 2a, pr65alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.26 E-value=1.1e-11 Score=140.52 Aligned_cols=217 Identities=16% Similarity=0.204 Sum_probs=177.0
Q ss_pred HHhhhhhchhhhcCCChhhhhhhhHHHHHHHHhcCCC--CchhhHHHHHhccCCChhhhhhhhHHHHHHhhcCCcHHHHH
Q 004157 306 KDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSA--AAPALTALLKMGSWLSTEEFSVKVLPTIVKLFASNDRAIRV 383 (771)
Q Consensus 306 K~~F~~~L~~~l~~fP~~~~~~kILP~Ll~~~~~~~~--~~~~L~~ll~i~~~l~~eef~~~i~P~i~~lF~~~Dr~iR~ 383 (771)
|......+......+........++|.+.+.+..... ...++..+-.+...+..+.+...++|.+..+..+.+|.+|.
T Consensus 341 r~~~~~~l~~~~~~~~~~~~~~~l~p~l~~~l~d~~~~v~~~~~~~l~~~~~~~~~~~~~~~ll~~l~~~~~d~~~~~r~ 420 (588)
T d1b3ua_ 341 KSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRL 420 (588)
T ss_dssp HHHHHTTGGGGHHHHCHHHHHHHTHHHHHHHHTCSCHHHHHHHHTTCHHHHHHSCHHHHHHHHHHHHHHHHTCSSHHHHH
T ss_pred HHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhcchhhhhhHHHHHHHHHHhcccHHHHH
Confidence 3333333444444444555566788888887764321 11222223344555666778888999999999999999999
Q ss_pred HHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHHHHHHhhccCCCCcchhhH
Q 004157 384 ALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNT 463 (771)
Q Consensus 384 ~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL~~laklq~D~~~~IRtnt 463 (771)
..++.+..++..++.+.+.+.+.|.+..++.|....||+++++++..++..++.......+++.+..+..|+...+|..+
T Consensus 421 ~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~D~~~~VR~~A~~~L~~l~~~~~~~~~~~~i~~~l~~~~~~~~~~~R~~~ 500 (588)
T d1b3ua_ 421 AIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTT 500 (588)
T ss_dssp HHHHHHHHHHHHHCGGGCCHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHHCHHHHHHHTHHHHHHTTTCSCHHHHHHH
T ss_pred HHHHHHHHHHHHcChHhHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhcCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988888999999999999999999999
Q ss_pred HHHHHHhhhccCcchhhHHhHHHHHHhhhcCCCcchhhheeee------cc-------------------CCHHHHHHHH
Q 004157 464 TILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL------SY-------------------LNCDVRSKAF 518 (771)
Q Consensus 464 ~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R~a~l~a------~~-------------------~~~~VR~~a~ 518 (771)
+.|++++++.++.+...+.++|.+. ++++|+.+.+|.+++.+ .+ ++.+||..|.
T Consensus 501 ~~~l~~l~~~~~~~~~~~~ilp~ll-~~~~D~v~nVR~~a~~~l~~i~~~~~~~~~~~~i~~~l~~L~~D~d~dVr~~A~ 579 (588)
T d1b3ua_ 501 LFCINVLSEVCGQDITTKHMLPTVL-RMAGDPVANVRFNVAKSLQKIGPILDNSTLQSEVKPILEKLTQDQDVDVKYFAQ 579 (588)
T ss_dssp HHHHHHHHHHHHHHHHHHHTHHHHH-HGGGCSCHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHTTCSSHHHHHHHH
T ss_pred HHHHHHHHHHcChHHHHHHHHHHHH-HHcCCCCHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 9999999999998877778999999 99999999999998877 11 6777888888
Q ss_pred HHHHH
Q 004157 519 QAVDQ 523 (771)
Q Consensus 519 ~~~~~ 523 (771)
++++.
T Consensus 580 ~al~~ 584 (588)
T d1b3ua_ 580 EALTV 584 (588)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87765
|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Constant regulatory domain of protein phosphatase 2a, pr65alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.24 E-value=2.7e-11 Score=137.20 Aligned_cols=228 Identities=14% Similarity=0.197 Sum_probs=195.3
Q ss_pred cCChhhHHhhhhhchhhhcCCChhhhhhhhHHHHHHHHhcCC--CCchhhHHHHHhccCCChhhhhhhhHHHHHHhhcCC
Q 004157 300 LKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGS--AAAPALTALLKMGSWLSTEEFSVKVLPTIVKLFASN 377 (771)
Q Consensus 300 ~k~~~eK~~F~~~L~~~l~~fP~~~~~~kILP~Ll~~~~~~~--~~~~~L~~ll~i~~~l~~eef~~~i~P~i~~lF~~~ 377 (771)
-.++.-|..-...+......++.......++|.|.+.+.... ....++..+..++..++.+++...++|.+..++.++
T Consensus 175 D~~~~VR~~a~~~l~~~~~~~~~~~~~~~l~~~l~~l~~d~~~~vr~~a~~~l~~i~~~~~~~~~~~~i~~~l~~~~~D~ 254 (588)
T d1b3ua_ 175 DDTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPQEDLEALVMPTLRQAAEDK 254 (588)
T ss_dssp CSCHHHHHHHHHHHHHHHHTSCHHHHHHTHHHHHHHHHTCSCHHHHTTHHHHHHHHHHHSCHHHHHHHTHHHHHHHHTCS
T ss_pred cCCHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCchhhHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccc
Confidence 355566666777778888888888888899999988776543 223456667788888889999999999999999999
Q ss_pred cHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChh----HHhHHHHHHHHhhcc
Q 004157 378 DRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQR----TISGSLLKYLSKLQV 453 (771)
Q Consensus 378 Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~----~l~~~LL~~laklq~ 453 (771)
++.||...++.|..++..++.+.....++|.+..++.|.++.||..+++.+..++..+... ...++++|.+.++..
T Consensus 255 ~~~Vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~~ll~d~~~~vr~~a~~~l~~~~~~l~~~~~~~~~~~~i~~~l~~~~~ 334 (588)
T d1b3ua_ 255 SWRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVS 334 (588)
T ss_dssp SHHHHHHHHHTHHHHHHHHCHHHHHHTHHHHHHHHHTCSSHHHHHHHHHHHHHHHHTSCTTTHHHHHHHTHHHHHHHHHT
T ss_pred cHHHHHHHHHhHHHHHHHhhhhhhhhhhhHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999999999999999999999888754 345789999999999
Q ss_pred CCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCCcchhhheeee--c----c-------------------
Q 004157 454 DEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL--S----Y------------------- 508 (771)
Q Consensus 454 D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R~a~l~a--~----~------------------- 508 (771)
|.++.||..++.||+.+++.+++....+.++|.|. ..++|+...+|.+++.+ . +
T Consensus 335 d~~~~vr~~~~~~l~~~~~~~~~~~~~~~l~p~l~-~~l~d~~~~v~~~~~~~l~~~~~~~~~~~~~~~ll~~l~~~~~d 413 (588)
T d1b3ua_ 335 DANQHVKSALASVIMGLSPILGKDNTIEHLLPLFL-AQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAED 413 (588)
T ss_dssp CSCHHHHHHHHTTGGGGHHHHCHHHHHHHTHHHHH-HHHTCSCHHHHHHHHTTCHHHHHHSCHHHHHHHHHHHHHHHHTC
T ss_pred CCChHHHHHHHHHHhhhhhccchhHHHHHHHHHHH-HHHHhhhhhhhhHHHHHHHHHHhhcchhhhhhHHHHHHHHHHhc
Confidence 99999999999999999999998877778899999 99999999999988776 1 0
Q ss_pred CCHHHHHHHHHHHHHHHHHH
Q 004157 509 LNCDVRSKAFQAVDQFLQIV 528 (771)
Q Consensus 509 ~~~~VR~~a~~~~~~~l~~l 528 (771)
++..||..+.+++..+.+.+
T Consensus 414 ~~~~~r~~~~~~l~~l~~~~ 433 (588)
T d1b3ua_ 414 AKWRVRLAIIEYMPLLAGQL 433 (588)
T ss_dssp SSHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHc
Confidence 67789999888888776654
|
| >d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin beta species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.05 E-value=0.00019 Score=75.59 Aligned_cols=222 Identities=11% Similarity=0.114 Sum_probs=154.8
Q ss_pred hHHhhhhhchhhhcCCChhhh---hhhhHHHHHHHHhcCCCCch----hhHHHHHhccCC----ChhhhhhhhHHHHHHh
Q 004157 305 EKDTFFRKLPNLAEQLPRQIV---LKKLLPLLASALEFGSAAAP----ALTALLKMGSWL----STEEFSVKVLPTIVKL 373 (771)
Q Consensus 305 eK~~F~~~L~~~l~~fP~~~~---~~kILP~Ll~~~~~~~~~~~----~L~~ll~i~~~l----~~eef~~~i~P~i~~l 373 (771)
.+...+..+............ ...+++.+...+........ ++..+..+.... ..+.+...+.+.+..+
T Consensus 145 ~~~~~l~~l~~~~~~~~~~~~~~~~~~il~~~~~~l~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 224 (458)
T d1ibrb_ 145 MKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEA 224 (458)
T ss_dssp HHHHHHHHHHHHHHHSCGGGTGGGHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHTTTTHHHHTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHhHhhHHHH
Confidence 344455555555444443332 34577888777765433222 222233333322 2344556688889999
Q ss_pred hcCCcHHHHHHHHHhHHHHHhhcChh---hhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccC----------------
Q 004157 374 FASNDRAIRVALLQHIDQYGQSFSAQ---VVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPK---------------- 434 (771)
Q Consensus 374 F~~~Dr~iR~~LL~~l~~~~~~l~~~---~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~k---------------- 434 (771)
+..+|..+|...++.|..+++..+.. .+.+.+++.+..++.+.+..+|..++..+..++..
T Consensus 225 ~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~l~~i~~~~~~~~~~~~~~~~~~~ 304 (458)
T d1ibrb_ 225 TQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGR 304 (458)
T ss_dssp TTCSSHHHHHHHHHHHHHHHHHCGGGCTTTTTTTHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCSSS
T ss_pred hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHhhh
Confidence 99999999999999999988877643 34555677788889999999999888777665421
Q ss_pred -------CChhHHhHHHHHHHHhhcc-------CCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCCcchh
Q 004157 435 -------LSQRTISGSLLKYLSKLQV-------DEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPAR 500 (771)
Q Consensus 435 -------L~~~~l~~~LL~~laklq~-------D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R 500 (771)
.-.......+++.+...-. |.+..+|..+..|++.++..+++.. ...|++.+. ..++|+.+.+|
T Consensus 305 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~a~~~l~~l~~~~~~~~-~~~l~~~i~-~~l~s~~~~~r 382 (458)
T d1ibrb_ 305 PPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDI-VPHVLPFIK-EHIKNPDWRYR 382 (458)
T ss_dssp CSSCCCCCHHHHHHHHHHHHHHHHTTCCCSSCCTTCCSHHHHHHHHHHHHHHHTTTTH-HHHHHHHHH-HHTTCSSHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhcchhhhccccccHHHHHHHHHHHHHHhccHhh-hhHHHHHHH-HHhcCCCHHHH
Confidence 1112334556666666543 3356799999999999999998765 457889999 99999999999
Q ss_pred hheeee--------------cc--------------CCHHHHHHHHHHHHHHHHHH
Q 004157 501 GAAKIL--------------SY--------------LNCDVRSKAFQAVDQFLQIV 528 (771)
Q Consensus 501 ~a~l~a--------------~~--------------~~~~VR~~a~~~~~~~l~~l 528 (771)
-||+++ .| ++..||..|..++..|.+.+
T Consensus 383 ~aal~~l~~i~~~~~~~~~~~~l~~i~~~l~~~l~d~~~~VR~~a~~~l~~i~~~~ 438 (458)
T d1ibrb_ 383 DAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELL 438 (458)
T ss_dssp HHHHHHHHHTSSSSCTTTTCTTTTTHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHh
Confidence 999887 01 78999999999998887554
|
| >d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.66 E-value=0.00014 Score=77.05 Aligned_cols=186 Identities=13% Similarity=0.128 Sum_probs=132.4
Q ss_pred CChhhhhhhhHHHHHHHHhcCCCC--chhhHHHHHhccCCCh---hhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHh
Q 004157 320 LPRQIVLKKLLPLLASALEFGSAA--APALTALLKMGSWLST---EEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQ 394 (771)
Q Consensus 320 fP~~~~~~kILP~Ll~~~~~~~~~--~~~L~~ll~i~~~l~~---eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~ 394 (771)
.........++|.|...+...... ..++..+-.++..-.. .-+...++|.++.++...+..++...+.-+..+..
T Consensus 180 ~~~~~~~~~~l~~l~~ll~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~Lv~ll~~~~~~~~~~al~~l~~l~~ 259 (434)
T d1q1sc_ 180 APPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVT 259 (434)
T ss_dssp CCCHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTT
T ss_pred cchhhhhhhHHHHHHHHHhccccchhhhHHhhhcccchhhhhhHHHHhhcccchhcccccccchhhhhhchhhhhhhHHh
Confidence 444455667888888776654321 1122233333332111 11334588999999999999998777777776654
Q ss_pred h---cChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChh---HHhHHHHHHHHhhccCCCCcchhhHHHHHH
Q 004157 395 S---FSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQR---TISGSLLKYLSKLQVDEEPAIRTNTTILLG 468 (771)
Q Consensus 395 ~---l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~---~l~~~LL~~laklq~D~~~~IRtnt~icl~ 468 (771)
. .....++..+++.++..+.+.++.||+.++..+..++-.-.+. .++..+++.|-.+-.+.++.||.+++.+|+
T Consensus 260 ~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~~~i~~li~~l~~~~~~v~~~a~~~l~ 339 (434)
T d1q1sc_ 260 GTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAIT 339 (434)
T ss_dssp SCHHHHHHHHHTTGGGGHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHSSCHHHHHHHHHHHH
T ss_pred hhhHHHHHHHhccccchHHHhhcccchhhhHHHHHHHhhhccccchhHHHHhhhhhHHHHHHHHhccChHHHHHHHHHHH
Confidence 3 2344667788999999999999999999999998887543321 345567888888878888999999999999
Q ss_pred HhhhccCcchhhHHh----HHHHHHhhhcCCCcchhhheeee
Q 004157 469 NIASHLNEGTRKRVL----INAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 469 kia~~L~~~~~~~vL----~~af~~~~lkD~f~~~R~a~l~a 506 (771)
.++.+-+.+....++ ++.+. ..|.+.....+.++|.+
T Consensus 340 nl~~~~~~~~~~~l~~~~~i~~L~-~ll~~~d~~~~~~~l~~ 380 (434)
T d1q1sc_ 340 NYTSGGTVEQIVYLVHCGIIEPLM-NLLSAKDTKIIQVILDA 380 (434)
T ss_dssp HHHHHSCHHHHHHHHHTTCHHHHH-HHTTSSCHHHHHHHHHH
T ss_pred HHHhcCCHHHHHHHHHCCcHHHHH-HHhcCCCHHHHHHHHHH
Confidence 999887766544432 78888 89999999899888877
|
| >d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: PBS lyase HEAT-like repeat domain: Hypothetical protein YibA species: Escherichia coli [TaxId: 562]
Probab=97.41 E-value=0.0006 Score=67.10 Aligned_cols=143 Identities=11% Similarity=0.046 Sum_probs=108.2
Q ss_pred hHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHH
Q 004157 366 VLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLL 445 (771)
Q Consensus 366 i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL 445 (771)
....|.+++.++|+.||...++.|-.+.. +..+|.++..++|.++.||..++.++..+...-.... .++
T Consensus 20 ~~~~L~~~L~d~~~~vR~~A~~~L~~~~~--------~~~~~~l~~~l~d~~~~vr~~a~~aL~~l~~~~~~~~---~~~ 88 (276)
T d1oyza_ 20 NDDELFRLLDDHNSLKRISSARVLQLRGG--------QDAVRLAIEFCSDKNYIRRDIGAFILGQIKICKKCED---NVF 88 (276)
T ss_dssp CHHHHHHHTTCSSHHHHHHHHHHHHHHCC--------HHHHHHHHHHHTCSSHHHHHHHHHHHHHSCCCTTTHH---HHH
T ss_pred CHHHHHHHhcCCCHHHHHHHHHHHHhhCC--------HhHHHHHHHHHcCCCHHHHHHHHHHHHHhcccccccc---chH
Confidence 34558899999999999999998876642 3578999999999999999999999887754332221 222
Q ss_pred H-HHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCCcchhhheeee--cc--------------
Q 004157 446 K-YLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL--SY-------------- 508 (771)
Q Consensus 446 ~-~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R~a~l~a--~~-------------- 508 (771)
+ .+..+..|+++.||.+.+.+|++++..-.. ....+++.+. ..+.|+.+.+|.+++.+ .+
T Consensus 89 ~~l~~~~l~d~~~~vr~~a~~aL~~~~~~~~~--~~~~~~~~l~-~~~~d~~~~vr~~a~~~l~~~~~~~~~~~l~~l~~ 165 (276)
T d1oyza_ 89 NILNNMALNDKSACVRATAIESTAQRCKKNPI--YSPKIVEQSQ-ITAFDKSTNVRRATAFAISVINDKATIPLLINLLK 165 (276)
T ss_dssp HHHHHHHHHCSCHHHHHHHHHHHHHHHHHCGG--GHHHHHHHHH-HHTTCSCHHHHHHHHHHHHTC---CCHHHHHHHHT
T ss_pred HHHHHHHhcCCChhHHHHHHHHHHHHccccch--hhHHHHHHHH-HHhcCcchHHHHHHHHHHhhcchHHHHHHHHHhcc
Confidence 2 344556799999999999999999876432 3456788888 89999999999988876 11
Q ss_pred -CCHHHHHHHHHHHH
Q 004157 509 -LNCDVRSKAFQAVD 522 (771)
Q Consensus 509 -~~~~VR~~a~~~~~ 522 (771)
.+..||..+...+.
T Consensus 166 ~~~~~~~~~~~~~~~ 180 (276)
T d1oyza_ 166 DPNGDVRNWAAFAIN 180 (276)
T ss_dssp CSSHHHHHHHHHHHH
T ss_pred cccchhhhhHHHHHH
Confidence 56667776665553
|
| >d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin beta species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.41 E-value=0.00021 Score=75.36 Aligned_cols=125 Identities=12% Similarity=0.125 Sum_probs=98.4
Q ss_pred hhhhHHHHHHhhc-------CCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCC
Q 004157 363 SVKVLPTIVKLFA-------SNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKL 435 (771)
Q Consensus 363 ~~~i~P~i~~lF~-------~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL 435 (771)
...+.|.+..... ..+..+|......+..+...++++. -..++|.+..++.|.+..+|++++..+..++...
T Consensus 318 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~a~~~l~~l~~~~~~~~-~~~l~~~i~~~l~s~~~~~r~aal~~l~~i~~~~ 396 (458)
T d1ibrb_ 318 LQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDI-VPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGP 396 (458)
T ss_dssp HHHHHHHHHHHTTCCCSSCCTTCCSHHHHHHHHHHHHHHHTTTTH-HHHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSS
T ss_pred HHHHhhhHHhhhhcchhhhccccccHHHHHHHHHHHHHHhccHhh-hhHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhc
Confidence 3445566555543 2334688888999999998888765 4679999999999999999999999999988765
Q ss_pred Chh---HHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcch-hhHHhHHHHH
Q 004157 436 SQR---TISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGT-RKRVLINAFT 488 (771)
Q Consensus 436 ~~~---~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~-~~~vL~~af~ 488 (771)
... ....++++.|..+..|+.+.||.+++.|||+|+.++.... ...+|.+.+.
T Consensus 397 ~~~~~~~~l~~i~~~l~~~l~d~~~~VR~~a~~~l~~i~~~~~~~~~~~~~l~~ll~ 453 (458)
T d1ibrb_ 397 EPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAAINDVYLAPLLQ 453 (458)
T ss_dssp CTTTTCTTTTTHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHGGGGCCSTTTHHHHHH
T ss_pred CHhHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHH
Confidence 433 2356799999999999999999999999999999998654 4555666655
|
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Cullin-associated NEDD8-dissociated protein 1 (Tip120) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.30 E-value=0.0013 Score=79.04 Aligned_cols=249 Identities=10% Similarity=0.091 Sum_probs=155.2
Q ss_pred hHHHHHHHhccCCCCCCChH-HH---hhCCCCC-cc-hhhhhhhh-hhhhccCChhhHHhhhhhchhhhcCCChhhhhhh
Q 004157 256 LLPDYQRLLSSMPSRRLNSS-KL---IENSEYF-QN-KLVDTIHF-MEILNLKDSVEKDTFFRKLPNLAEQLPRQIVLKK 328 (771)
Q Consensus 256 l~~~i~~lL~~~P~~Rps~~-~l---L~~~~fF-~n-~lv~~~~~-L~~l~~k~~~eK~~F~~~L~~~l~~fP~~~~~~k 328 (771)
+..++.+|-+.||.-|..+. ++ ++...+. .+ ..-+.... +.-+.-++++-+..-.+.|..+...+++... ..
T Consensus 5 ~~~ll~k~~~~D~d~R~ma~~dl~~~l~~~~~~~~~~~~~~i~~~ll~~L~D~~~~Vq~~A~k~l~~l~~~~~~~~~-~~ 83 (1207)
T d1u6gc_ 5 ISNLLEKMTSSDKDFRFMATNDLMTELQKDSIKLDDDSERKVVKMILKLLEDKNGEVQNLAVKCLGPLVSKVKEYQV-ET 83 (1207)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHHTSSSCCSCCTTHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHTTSCHHHH-HH
T ss_pred HHHHHHhcCCCCHhHHHHHHHHHHHHHhhcccccChHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhCcHhhH-HH
Confidence 34566777777877776443 22 3222211 11 12222222 3334445566666677777777777776543 45
Q ss_pred hHHHHHHHHhcCCCC-----chhhHHHHHh-ccCCChhhh----hhhhHHHHHHhh-cCCcHHHHHHHHHhHHHHHhhcC
Q 004157 329 LLPLLASALEFGSAA-----APALTALLKM-GSWLSTEEF----SVKVLPTIVKLF-ASNDRAIRVALLQHIDQYGQSFS 397 (771)
Q Consensus 329 ILP~Ll~~~~~~~~~-----~~~L~~ll~i-~~~l~~eef----~~~i~P~i~~lF-~~~Dr~iR~~LL~~l~~~~~~l~ 397 (771)
+++.|+..+...... ...|..++.. ........+ ...+++.+.... ...+..+|...++-+..++.+++
T Consensus 84 l~~~L~~~l~~~~~~~r~~~~~~L~~i~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~al~~l~~l~~~~g 163 (1207)
T d1u6gc_ 84 IVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPASSGSALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLSRQG 163 (1207)
T ss_dssp HHHHHHHHTTCSSSHHHHHHHHHHHHHHHHCC-----CCTHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhcCCchhhhHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHhh
Confidence 677777765433221 1123332221 111111223 333444444433 34567899999999989988887
Q ss_pred hhh--hhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccC
Q 004157 398 AQV--VDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLN 475 (771)
Q Consensus 398 ~~~--v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~ 475 (771)
... ....|++.++..+.|.++.||..++.++-.++..++...+..-+-..+..+..+....+|-..+-||+.|+...+
T Consensus 164 ~~l~~~~~~il~~l~~~l~~~~~~vR~~A~~~l~~l~~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~~~~~l~~l~~~~~ 243 (1207)
T d1u6gc_ 164 GLLVNFHPSILTCLLPQLTSPRLAVRKRTIIALGHLVMSCGNIVFVDLIEHLLSELSKNDSMSTTRTYIQCIAAISRQAG 243 (1207)
T ss_dssp SSCTTTHHHHHHHHGGGGGCSSHHHHHHHHHHHHHHTTTC----CTTHHHHHHHHHHHTCSSCSCTTHHHHHHHHHHHSS
T ss_pred HhhHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHcc
Confidence 543 245689999999999999999999999999999999876554444455566677788888889999999998776
Q ss_pred cchh--hHHhHHHHHHhhhcCCCcchhhheeee
Q 004157 476 EGTR--KRVLINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 476 ~~~~--~~vL~~af~~~~lkD~f~~~R~a~l~a 506 (771)
..-. ..-+++.+. +.+.+.....|-+++.+
T Consensus 244 ~~~~~~l~~i~~~l~-~~l~~~~~~~r~~al~~ 275 (1207)
T d1u6gc_ 244 HRIGEYLEKIIPLVV-KFCNVDDDELREYCIQA 275 (1207)
T ss_dssp GGGTTSCTTHHHHHH-HHHSSCCTTTHHHHHHH
T ss_pred hhhHHHHHHHHHHHH-HHhcCccHHHHHHHHHH
Confidence 5421 234577777 89999999999888776
|
| >d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: PBS lyase HEAT-like repeat domain: MTH187 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=97.30 E-value=0.00018 Score=61.95 Aligned_cols=86 Identities=14% Similarity=0.102 Sum_probs=68.8
Q ss_pred ccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHHh
Q 004157 404 QVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVL 483 (771)
Q Consensus 404 ~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~vL 483 (771)
..++.++.++.|.++.||..++.++..+. . .+.++.|.++..|+++.||.+++.+|++|.. .-.
T Consensus 22 ~~~~~L~~~l~d~~~~vR~~a~~~L~~~~----~----~~~~~~L~~~l~d~~~~VR~~a~~aL~~i~~--------~~~ 85 (111)
T d1te4a_ 22 EAFEPLLESLSNEDWRIRGAAAWIIGNFQ----D----ERAVEPLIKLLEDDSGFVRSGAARSLEQIGG--------ERV 85 (111)
T ss_dssp TTHHHHHHGGGCSCHHHHHHHHHHHGGGC----S----HHHHHHHHHHHHHCCTHHHHHHHHHHHHHCS--------HHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHhcc----h----hhhHHHHHhhhccchhHHHHHHHHHHHHhCc--------cch
Confidence 45678899999999999999999886443 2 3456667777789999999999999999853 234
Q ss_pred HHHHHHhhhcCCCcchhhheeee
Q 004157 484 INAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 484 ~~af~~~~lkD~f~~~R~a~l~a 506 (771)
++.+. +.++|+...+|.+|+.+
T Consensus 86 ~~~L~-~ll~d~~~~vr~~A~~a 107 (111)
T d1te4a_ 86 RAAME-KLAETGTGFARKVAVNY 107 (111)
T ss_dssp HHHHH-HHTTSCCTHHHHHHHHH
T ss_pred HHHHH-HHHcCCCHHHHHHHHHH
Confidence 67777 89999999988888765
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=97.22 E-value=0.00097 Score=65.84 Aligned_cols=76 Identities=4% Similarity=-0.056 Sum_probs=46.1
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d~~~ 97 (771)
+|++.+..+.++ + .||+.. .++..+.||+....... ....+.+|...|+.|. +--+.+++.+.+.+
T Consensus 15 ~~~~~~~~~G~s~~--~v~rv~--~~~~~~vlk~~~~~~~~--~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~------ 82 (263)
T d1j7la_ 15 KYRCVKDTEGMSPA--KVYKLV--GENENLYLKMTDSRYKG--TTYDVEREKDMMLWLEGKLPVPKVLHFERHD------ 82 (263)
T ss_dssp TSEEEECSCCCSSS--EEEEEE--CSSCEEEEEEECGGGTT--STTCHHHHHHHHHHHTTTSCCCCEEEEEEET------
T ss_pred ceEEEEcCCCCCCC--cEEEEE--eCCCeEEEEEcCCCccc--chhhHHHHHHHHHHHhccCCCCcEEEEEecC------
Confidence 466665544333 4 788775 35677888887643211 1223566777777764 32255666666543
Q ss_pred cccEEEEEecCC
Q 004157 98 TKITIYIVTEPV 109 (771)
Q Consensus 98 ~~~~iyIVtE~v 109 (771)
...|+|||++
T Consensus 83 --~~~~lv~~~l 92 (263)
T d1j7la_ 83 --GWSNLLMSEA 92 (263)
T ss_dssp --TEEEEEEECC
T ss_pred --CceEEEEEec
Confidence 3779999999
|
| >d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.05 E-value=0.0023 Score=67.18 Aligned_cols=169 Identities=15% Similarity=0.186 Sum_probs=130.3
Q ss_pred hhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcC---hhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCC
Q 004157 360 EEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFS---AQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLS 436 (771)
Q Consensus 360 eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~---~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~ 436 (771)
-++...++|.+..+....|..++...+.-+..+...-. ...+...++|.++..+.+.++.+++.+++.+..++..-+
T Consensus 183 ~~~~~~~l~~l~~ll~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~Lv~ll~~~~~~~~~~al~~l~~l~~~~~ 262 (434)
T d1q1sc_ 183 LDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTD 262 (434)
T ss_dssp HHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCH
T ss_pred hhhhhhHHHHHHHHHhccccchhhhHHhhhcccchhhhhhHHHHhhcccchhcccccccchhhhhhchhhhhhhHHhhhh
Confidence 34567789999999999999998888777777765432 223456799999999999999999999999998875432
Q ss_pred h---hHHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcc---hhhHHhHHHHHHhhhcCCCcchhhheeee--c-
Q 004157 437 Q---RTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEG---TRKRVLINAFTVRALRDTFSPARGAAKIL--S- 507 (771)
Q Consensus 437 ~---~~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~---~~~~vL~~af~~~~lkD~f~~~R~a~l~a--~- 507 (771)
+ ..++..+++.|.++..++++.||..++.+|+.|+..-... -...-+++.+. ..+.++...+|..++.+ .
T Consensus 263 ~~~~~~~~~~~~~~l~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~~~i~~li-~~l~~~~~~v~~~a~~~l~nl 341 (434)
T d1q1sc_ 263 EQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLV-GVLSKADFKTQKEAAWAITNY 341 (434)
T ss_dssp HHHHHHHHTTGGGGHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHH-HHHHSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccccchHHHhhcccchhhhHHHHHHHhhhccccchhHHHHhhhhhHHHHH-HHHhccChHHHHHHHHHHHHH
Confidence 2 2345667778888888889999999999999998643221 11222578888 89999999999999887 0
Q ss_pred --c------------------------CCHHHHHHHHHHHHHHHHHHH
Q 004157 508 --Y------------------------LNCDVRSKAFQAVDQFLQIVK 529 (771)
Q Consensus 508 --~------------------------~~~~VR~~a~~~~~~~l~~l~ 529 (771)
+ .+.+++..|.+++..+++..+
T Consensus 342 ~~~~~~~~~~~l~~~~~i~~L~~ll~~~d~~~~~~~l~~l~~ll~~~~ 389 (434)
T d1q1sc_ 342 TSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQAAE 389 (434)
T ss_dssp HHHSCHHHHHHHHHTTCHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCHHHHHHHHHCCcHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 0 788899999998888876554
|
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Cullin-associated NEDD8-dissociated protein 1 (Tip120) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.04 E-value=0.0044 Score=74.08 Aligned_cols=201 Identities=13% Similarity=0.125 Sum_probs=131.9
Q ss_pred hhhhhHHHHHHHHhcCCC--CchhhHHHHHhccCCChhhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChh---
Q 004157 325 VLKKLLPLLASALEFGSA--AAPALTALLKMGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQ--- 399 (771)
Q Consensus 325 ~~~kILP~Ll~~~~~~~~--~~~~L~~ll~i~~~l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~--- 399 (771)
...||++.|++.++..+. ...++..+-.+...++.+.. ..+++.+.......+..+|-.-...|..++..++..
T Consensus 42 ~~~~i~~~ll~~L~D~~~~Vq~~A~k~l~~l~~~~~~~~~-~~l~~~L~~~l~~~~~~~r~~~~~~L~~i~~~l~~~~~~ 120 (1207)
T d1u6gc_ 42 SERKVVKMILKLLEDKNGEVQNLAVKCLGPLVSKVKEYQV-ETIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPASSG 120 (1207)
T ss_dssp HHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHTTSCHHHH-HHHHHHHHHHTTCSSSHHHHHHHHHHHHHHHHCC-----
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhCcHhhH-HHHHHHHHHHhcCCchhhhHHHHHHHHHHHHhccccccc
Confidence 456799999998875432 12233444445566665443 456666666555555555544444455555555432
Q ss_pred -----hhhhccHHHHHhhcCC-CcHHHHHHHHHHHHhhccCCChh--HHhHHHHHHHHhhccCCCCcchhhHHHHHHHhh
Q 004157 400 -----VVDEQVYPHVATGFAD-TSAFLREMTLKSMLVLAPKLSQR--TISGSLLKYLSKLQVDEEPAIRTNTTILLGNIA 471 (771)
Q Consensus 400 -----~v~~~I~p~l~~gf~D-~~~~iRe~tlk~i~~l~~kL~~~--~l~~~LL~~laklq~D~~~~IRtnt~icl~kia 471 (771)
.+...+.+.+...... .+..+|..++..+..++.+++.. .....+++.|.....|++..||..++.||+.++
T Consensus 121 ~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~al~~l~~l~~~~g~~l~~~~~~il~~l~~~l~~~~~~vR~~A~~~l~~l~ 200 (1207)
T d1u6gc_ 121 SALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLSRQGGLLVNFHPSILTCLLPQLTSPRLAVRKRTIIALGHLV 200 (1207)
T ss_dssp CCTHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHHHHHHHTCSSCTTTHHHHHHHHGGGGGCSSHHHHHHHHHHHHHHT
T ss_pred chhHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 2334455566655544 56789999988888887766642 224567888877778899999999999999999
Q ss_pred hccCcchhhHHhHHHHHHhhhcCCCcchhhheeee-------------cc--------------CCHHHHHHHHHHHHHH
Q 004157 472 SHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL-------------SY--------------LNCDVRSKAFQAVDQF 524 (771)
Q Consensus 472 ~~L~~~~~~~vL~~af~~~~lkD~f~~~R~a~l~a-------------~~--------------~~~~VR~~a~~~~~~~ 524 (771)
.+++...-.+++-..+. ...++.....|.+++.+ .| .+.+||..|..+++.+
T Consensus 201 ~~~~~~~~~~~~~~ll~-~l~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~l~~i~~~l~~~l~~~~~~~r~~al~~l~~l 279 (1207)
T d1u6gc_ 201 MSCGNIVFVDLIEHLLS-ELSKNDSMSTTRTYIQCIAAISRQAGHRIGEYLEKIIPLVVKFCNVDDDELREYCIQAFESF 279 (1207)
T ss_dssp TTC----CTTHHHHHHH-HHHHTCSSCSCTTHHHHHHHHHHHSSGGGTTSCTTHHHHHHHHHSSCCTTTHHHHHHHHHHH
T ss_pred HHCCHHHHHHHHHHHHH-HHccCCCHHHHHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHH
Confidence 99998776666666666 56667777777666654 11 6788999999999888
Q ss_pred HHH
Q 004157 525 LQI 527 (771)
Q Consensus 525 l~~ 527 (771)
+..
T Consensus 280 ~~~ 282 (1207)
T d1u6gc_ 280 VRR 282 (1207)
T ss_dssp HHC
T ss_pred HHh
Confidence 754
|
| >d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin beta species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.97 E-value=0.013 Score=66.47 Aligned_cols=221 Identities=11% Similarity=0.119 Sum_probs=151.5
Q ss_pred HHhhhhhchhhhcCCChhhh---hhhhHHHHHHHHhcCCCCc----hhhHHHHHhccCC----ChhhhhhhhHHHHHHhh
Q 004157 306 KDTFFRKLPNLAEQLPRQIV---LKKLLPLLASALEFGSAAA----PALTALLKMGSWL----STEEFSVKVLPTIVKLF 374 (771)
Q Consensus 306 K~~F~~~L~~~l~~fP~~~~---~~kILP~Ll~~~~~~~~~~----~~L~~ll~i~~~l----~~eef~~~i~P~i~~lF 374 (771)
+...+.-|......+..... ...++|.++..+....... .++..+..+...+ ..+.+...++..+..+.
T Consensus 147 ~~~~l~~l~~i~~~~~~~~~~~~~~~il~~i~~~l~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~~~ 226 (876)
T d1qgra_ 147 KESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEAT 226 (876)
T ss_dssp HHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHSTTCSCHHHHHHHHHHHHHHGGGCHHHHTSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHh
Confidence 33344444444444443322 2457788877775443221 1222222222222 33456677888888999
Q ss_pred cCCcHHHHHHHHHhHHHHHhhcChh---hhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccC-----------------
Q 004157 375 ASNDRAIRVALLQHIDQYGQSFSAQ---VVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPK----------------- 434 (771)
Q Consensus 375 ~~~Dr~iR~~LL~~l~~~~~~l~~~---~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~k----------------- 434 (771)
..++..+|...++.|..+++..... .+.+.+++.+..++.+....++..++..+..++..
T Consensus 227 ~~~~~~v~~~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 306 (876)
T d1qgra_ 227 QCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRP 306 (876)
T ss_dssp TCSSHHHHHHHHHHHHHHHHHSGGGCHHHHTTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred cCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhhh
Confidence 9999999999999999998877654 35567888999999999999998887766555431
Q ss_pred ------CChhHHhHHHHHHHHhhcc-------CCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCCcchhh
Q 004157 435 ------LSQRTISGSLLKYLSKLQV-------DEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARG 501 (771)
Q Consensus 435 ------L~~~~l~~~LL~~laklq~-------D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R~ 501 (771)
.-.....+.+++.+..+.. |.+..+|..+..|+..++..++... ...+++.+. ..+.++.+..|-
T Consensus 307 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~a~~~l~~l~~~~~~~~-~~~~~~~i~-~~l~~~~~~~r~ 384 (876)
T d1qgra_ 307 PEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDI-VPHVLPFIK-EHIKNPDWRYRD 384 (876)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHHHTTCCCSSCCTTCCCHHHHHHHHHHHHHHHHGGGG-HHHHHHHHH-HHTTCSSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHhcccccccccchHHHHHHHHHHHHHHHhhhhh-hhhhHHHHH-HhhccchHHHHH
Confidence 1123445677777766543 2345799999999999999988755 456789999 999999999999
Q ss_pred heeee-----c---------c--------------CCHHHHHHHHHHHHHHHHHH
Q 004157 502 AAKIL-----S---------Y--------------LNCDVRSKAFQAVDQFLQIV 528 (771)
Q Consensus 502 a~l~a-----~---------~--------------~~~~VR~~a~~~~~~~l~~l 528 (771)
|++.+ . | ++..||..|..++..+.+.+
T Consensus 385 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~ 439 (876)
T d1qgra_ 385 AAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELL 439 (876)
T ss_dssp HHHHHHHHTSSSSCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHHc
Confidence 88776 0 0 78899999998888776654
|
| >d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Karyopherin beta2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.84 E-value=0.00083 Score=78.45 Aligned_cols=126 Identities=13% Similarity=0.129 Sum_probs=98.3
Q ss_pred HHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChh--HHhHHHHHHHHhhccCCC
Q 004157 379 RAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQR--TISGSLLKYLSKLQVDEE 456 (771)
Q Consensus 379 r~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~--~l~~~LL~~laklq~D~~ 456 (771)
+.+|.+...-|..+...++++. -..++|.+...+.+.+..+|++++.++-.++....+. ....+++++|.....|++
T Consensus 371 ~~~r~~a~~~L~~l~~~~~~~i-l~~~l~~l~~~l~s~~~~~reaa~~alg~i~eg~~~~~~~~l~~li~~l~~~l~d~~ 449 (888)
T d1qbkb_ 371 WNLRKCSAAALDVLANVYRDEL-LPHILPLLKELLFHHEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKK 449 (888)
T ss_dssp CSSHHHHHHHSTTTTTTCCSSS-HHHHHHHHHHTTTSSSHHHHHHHHHHHHHHTTTSHHHHTTTHHHHHHHHHHHTTSSC
T ss_pred hhHHHHHHHHHhhHhhhhHHHH-HHHHHHHHHHhhccchhHHHHHHHHHhhhhhhhHHHHhcccchhhhHHHHHhccCCC
Confidence 4567666666666666666554 4668999999999999999999999988877655443 234678899999889999
Q ss_pred CcchhhHHHHHHHhhhccCcchhh---HHhHHHHHHhhhcCCCcchhhheeee
Q 004157 457 PAIRTNTTILLGNIASHLNEGTRK---RVLINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 457 ~~IRtnt~icl~kia~~L~~~~~~---~vL~~af~~~~lkD~f~~~R~a~l~a 506 (771)
+.||..++.|||+++.++...... .-+++.+. ..+.|+...+|.++..|
T Consensus 450 ~~Vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~~ll-~~l~d~~~~V~~~a~~a 501 (888)
T d1qbkb_ 450 ALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTELL-KRILDSNKRVQEAACSA 501 (888)
T ss_dssp HHHHHHHHHHHHHTHHHHHSSCHHHHTTTHHHHHH-HHHSSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHH-HHhcCCCHHHHHHHHHH
Confidence 999999999999999988654322 33566666 78999999999998887
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=96.69 E-value=0.0027 Score=67.17 Aligned_cols=29 Identities=17% Similarity=0.211 Sum_probs=25.4
Q ss_pred CCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 148 CKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 148 ~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
..++|||+++.||++++++ ++|.||+++.
T Consensus 223 ~~LiHGDl~~gNIlv~~~~-~~vID~E~a~ 251 (392)
T d2pula1 223 ETLIHGDLHTGSIFASEHE-TKVIDPEFAF 251 (392)
T ss_dssp CEEECSCCCGGGEEECSSC-EEECCCTTCE
T ss_pred cceeccCCcCCceeEcCCc-eEEechhhcc
Confidence 4699999999999998765 8999999874
|
| >d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Karyopherin alpha species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.59 E-value=0.013 Score=62.96 Aligned_cols=170 Identities=16% Similarity=0.183 Sum_probs=128.6
Q ss_pred hhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcC---hhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCC
Q 004157 360 EEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFS---AQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLS 436 (771)
Q Consensus 360 eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~---~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~ 436 (771)
-+....++|.+..++...|..++...+.-|..+...-. ...++..+++.++..+...+..++..+++.+-.++..-+
T Consensus 241 ~~~~~~~l~~l~~~l~~~d~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~~al~~l~nl~~~~~ 320 (503)
T d1wa5b_ 241 WSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGND 320 (503)
T ss_dssp HHHHGGGHHHHHHHTTCCCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCH
T ss_pred HHHHHHHHHHHHHHhccccHHHHHHHHHHHHhhccCCchhhhhhhhhhhhhhhhhcccCCchhhhhhHHHHHHHHHHHHH
Confidence 34556789999999999999998888877777765443 235667899999999999999999999999988885433
Q ss_pred hh---HHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhh----HHhHHHHHHhhhcCCCcchhhheeee--c
Q 004157 437 QR---TISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRK----RVLINAFTVRALRDTFSPARGAAKIL--S 507 (771)
Q Consensus 437 ~~---~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~----~vL~~af~~~~lkD~f~~~R~a~l~a--~ 507 (771)
.. .++..+++.|..+...+++.||..++-||+.|+.. +.+.+. .-+++.+. ..|..+...+|..++.+ .
T Consensus 321 ~~~~~~~~~~~l~~l~~ll~~~~~~i~~~~~~~l~nl~~~-~~~~~~~i~~~~~l~~li-~~l~~~~~~v~~~a~~~l~n 398 (503)
T d1wa5b_ 321 LQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAG-NTEQIQAVIDANLIPPLV-KLLEVAEYKTKKEACWAISN 398 (503)
T ss_dssp HHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTS-CHHHHHHHHHTTCHHHHH-HHHHHSCHHHHHHHHHHHHH
T ss_pred HHHHhhhccchHHHHHHHhcCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHHccccchhH-HhcccCChhHHHHHHHHHHH
Confidence 32 34557889999998888999999999999999753 222222 22366666 78888888888888776 0
Q ss_pred -------------c----------------CCHHHHHHHHHHHHHHHHHHHHH
Q 004157 508 -------------Y----------------LNCDVRSKAFQAVDQFLQIVKQY 531 (771)
Q Consensus 508 -------------~----------------~~~~VR~~a~~~~~~~l~~l~~~ 531 (771)
+ .+..+...+.+++..+++..+..
T Consensus 399 l~~~~~~~~~~~~~l~~~~~l~~l~~~L~~~d~~~~~~~L~~l~~ll~~~~~~ 451 (503)
T d1wa5b_ 399 ASSGGLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLDALENILKMGEAD 451 (503)
T ss_dssp HHHHTTTCTHHHHHHHHTTCHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcccccHHHHHHHHHCCcHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 0 67777777778777777655543
|
| >d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Karyopherin alpha species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.57 E-value=0.005 Score=66.37 Aligned_cols=207 Identities=14% Similarity=0.136 Sum_probs=140.9
Q ss_pred cCCChhhhhhhhHHHHHHHHhcCCCC--chhhHHHHHhccCCCh---hhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHH
Q 004157 318 EQLPRQIVLKKLLPLLASALEFGSAA--APALTALLKMGSWLST---EEFSVKVLPTIVKLFASNDRAIRVALLQHIDQY 392 (771)
Q Consensus 318 ~~fP~~~~~~kILP~Ll~~~~~~~~~--~~~L~~ll~i~~~l~~---eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~ 392 (771)
...+.......++|.|++.+...... ..++..+-.++..-.. .-+...+++.++.++...+..++...+.-+-.+
T Consensus 236 ~~~~~~~~~~~~l~~l~~~l~~~d~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~~al~~l~nl 315 (503)
T d1wa5b_ 236 KPQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNI 315 (503)
T ss_dssp SSCCCHHHHGGGHHHHHHHTTCCCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHhhccCCchhhhhhhhhhhhhhhhhcccCCchhhhhhHHHHHHHH
Confidence 34445556667899999887654321 1122233333332211 224456889999999999998887777666666
Q ss_pred Hhhc---ChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCC---hhHHhHHHHHHHHhhccCCCCcchhhHHHH
Q 004157 393 GQSF---SAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLS---QRTISGSLLKYLSKLQVDEEPAIRTNTTIL 466 (771)
Q Consensus 393 ~~~l---~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~---~~~l~~~LL~~laklq~D~~~~IRtnt~ic 466 (771)
+..- ....++..+++.+...+.+.++.||+.++..+..++-.=. ...++..+++.|-.+.......||..++.|
T Consensus 316 ~~~~~~~~~~~~~~~~l~~l~~ll~~~~~~i~~~~~~~l~nl~~~~~~~~~~i~~~~~l~~li~~l~~~~~~v~~~a~~~ 395 (503)
T d1wa5b_ 316 VTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLEVAEYKTKKEACWA 395 (503)
T ss_dssp TTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHH
T ss_pred HHHHHHHHHhhhccchHHHHHHHhcCCCHHHHHHHHHHHHHHhhccHHHHHHHHHccccchhHHhcccCChhHHHHHHHH
Confidence 5432 2234566789999999999999999999999988864311 223456677888887777888999999999
Q ss_pred HHHhhhccCcc--hhhHH----hHHHHHHhhhcCCCcchhhheeee-----c---------------c------------
Q 004157 467 LGNIASHLNEG--TRKRV----LINAFTVRALRDTFSPARGAAKIL-----S---------------Y------------ 508 (771)
Q Consensus 467 l~kia~~L~~~--~~~~v----L~~af~~~~lkD~f~~~R~a~l~a-----~---------------~------------ 508 (771)
|..++.+-... ....+ +++.|. ..|+........++|.+ . |
T Consensus 396 l~nl~~~~~~~~~~~~~l~~~~~l~~l~-~~L~~~d~~~~~~~L~~l~~ll~~~~~~~~~~~~~~~~~~~~iee~g~~~~ 474 (503)
T d1wa5b_ 396 ISNASSGGLQRPDIIRYLVSQGCIKPLC-DLLEIADNRIIEVTLDALENILKMGEADKEARGLNINENADFIEKAGGMEK 474 (503)
T ss_dssp HHHHHHHTTTCTHHHHHHHHTTCHHHHH-HHTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCHHHHHHHHTTHHHH
T ss_pred HHHHHhcccccHHHHHHHHHCCcHHHHH-HHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccchHHHHHHHHCCCHHH
Confidence 99998765432 11111 367777 78887777777776655 0 0
Q ss_pred -------CCHHHHHHHHHHHHHHH
Q 004157 509 -------LNCDVRSKAFQAVDQFL 525 (771)
Q Consensus 509 -------~~~~VR~~a~~~~~~~l 525 (771)
++.+|++.|.++++.|.
T Consensus 475 i~~Lq~~~~~~i~~~A~~il~~~f 498 (503)
T d1wa5b_ 475 IFNCQQNENDKIYEKAYKIIETYF 498 (503)
T ss_dssp HHGGGGCSCHHHHHHHHHHHHHHS
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHc
Confidence 67888888888888774
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=96.34 E-value=0.008 Score=58.55 Aligned_cols=29 Identities=21% Similarity=0.340 Sum_probs=25.3
Q ss_pred CceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 149 KLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 149 ~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
.++|||+.|.||+++.++..-|+||+.+.
T Consensus 176 ~liHgD~~~~Nvl~~~~~~~~iID~~~~~ 204 (255)
T d1nd4a_ 176 VVTHGDACLPNIMVENGRFSGFIDCGRLG 204 (255)
T ss_dssp EEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred eEEeCCCCCcceEEeCCceEEEEEchhcc
Confidence 48999999999999987767899999864
|
| >d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HspBP1 domain domain: Hsp70-binding protein 1 (HspBP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.33 E-value=0.0056 Score=60.43 Aligned_cols=138 Identities=12% Similarity=0.124 Sum_probs=105.5
Q ss_pred HHHHHHhhcCCcHHHHHHHHHhHHHHHhhcC---hhhhhhccHHHHHhhcC-CCcHHHHHHHHHHHHhhccCCChhH---
Q 004157 367 LPTIVKLFASNDRAIRVALLQHIDQYGQSFS---AQVVDEQVYPHVATGFA-DTSAFLREMTLKSMLVLAPKLSQRT--- 439 (771)
Q Consensus 367 ~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~---~~~v~~~I~p~l~~gf~-D~~~~iRe~tlk~i~~l~~kL~~~~--- 439 (771)
.+.|..+..+.+..||...+.-+..+..+-+ ...+...++|.++..+. +.++.+|+.++.++..++..-....
T Consensus 61 ~~ll~~ll~s~~~~vr~~A~~~L~~l~~~~~~~~~~~~~~~~i~~Lv~lL~~~~~~~v~~~a~~aL~~l~~~~~~~~~~~ 140 (264)
T d1xqra1 61 HLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLLQF 140 (264)
T ss_dssp HHHHHTTTTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHhhcCCCHHHHHHHHHHHHHHhccchhhHHHH
Confidence 3344556778888888888877777776543 34566789999999995 7889999999999999887665432
Q ss_pred HhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHH----hHHHHHHhhhcCCCcchhhheeee
Q 004157 440 ISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRV----LINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 440 l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~v----L~~af~~~~lkD~f~~~R~a~l~a 506 (771)
+....++.|.++..+.+..++.+++-+|+.++..= .+.+..+ .++.+. ..|+++...+|..++.+
T Consensus 141 ~~~~gi~~L~~lL~~~~~~~~~~a~~~L~~l~~~~-~~~~~~~~~~~~v~~L~-~lL~~~~~~~~~~a~~a 209 (264)
T d1xqra1 141 LRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGH-PEHKGTLCSMGMVQQLV-ALVRTEHSPFHEHVLGA 209 (264)
T ss_dssp HHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHC-GGGHHHHHHTTHHHHHH-HHHTSCCSTHHHHHHHH
T ss_pred HHhhhhhHHHHHHhcCchHHHHHHHHHHHHHHhcc-HHHHHHHHHhhhHHHHH-HHHcCCCHHHHHHHHHH
Confidence 34556778878777888999999999999998652 2223222 378888 89999999999999888
|
| >d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin beta species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.09 E-value=0.015 Score=65.96 Aligned_cols=140 Identities=10% Similarity=0.114 Sum_probs=106.7
Q ss_pred hhHHHHHHhhcCCc--HHHHHHHHHhHHHHHhhcChhhhh---hccHHHHHhhcCCC--cHHHHHHHHHHHHhhccCCCh
Q 004157 365 KVLPTIVKLFASND--RAIRVALLQHIDQYGQSFSAQVVD---EQVYPHVATGFADT--SAFLREMTLKSMLVLAPKLSQ 437 (771)
Q Consensus 365 ~i~P~i~~lF~~~D--r~iR~~LL~~l~~~~~~l~~~~v~---~~I~p~l~~gf~D~--~~~iRe~tlk~i~~l~~kL~~ 437 (771)
.++|.|.....++| ..+|...|.-|..+.+.+..+.+. +.|++.++.++.+. +..+|..+++.+..++..+..
T Consensus 128 eli~~L~~~l~~~~~~~~~~~~~l~~l~~i~~~~~~~~~~~~~~~il~~i~~~l~~~~~~~~v~~~a~~~l~~~~~~~~~ 207 (876)
T d1qgra_ 128 ELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKA 207 (876)
T ss_dssp THHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHSTTCSCHHHHHHHHHHHHHHGGGCHH
T ss_pred HHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHHHHHhhh
Confidence 47888888887766 467777777777777777765443 45899999999654 578999999999888776665
Q ss_pred h----HHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcch---hhHHhHHHHHHhhhcCCCcchhhheee
Q 004157 438 R----TISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGT---RKRVLINAFTVRALRDTFSPARGAAKI 505 (771)
Q Consensus 438 ~----~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~---~~~vL~~af~~~~lkD~f~~~R~a~l~ 505 (771)
. .....+++.+..+..++++.+|.++.-|+.+|+....+.. ...++.+.+. ..+++.....+..++.
T Consensus 208 ~~~~~~~~~~i~~~l~~~~~~~~~~v~~~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~ 281 (876)
T d1qgra_ 208 NFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITI-EAMKSDIDEVALQGIE 281 (876)
T ss_dssp HHTSHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSGGGCHHHHTTTHHHHHH-HHHTCSSHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH-HHhccccHHHHHHHHH
Confidence 3 4456688888888888999999999999999998876543 3345666666 7888888887776654
|
| >d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Karyopherin beta2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.08 E-value=0.0047 Score=71.76 Aligned_cols=145 Identities=12% Similarity=0.123 Sum_probs=105.4
Q ss_pred hhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChh--hhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCCh
Q 004157 360 EEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQ--VVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQ 437 (771)
Q Consensus 360 eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~--~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~ 437 (771)
++....++|.|...+.+++|.+|-..+--|-.+.+..... ..-.+++|.++.++.|.++.||..++..+-.++..+..
T Consensus 390 ~~il~~~l~~l~~~l~s~~~~~reaa~~alg~i~eg~~~~~~~~l~~li~~l~~~l~d~~~~Vr~~a~~~l~~~~~~~~~ 469 (888)
T d1qbkb_ 390 DELLPHILPLLKELLFHHEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVS 469 (888)
T ss_dssp SSSHHHHHHHHHHTTTSSSHHHHHHHHHHHHHHTTTSHHHHTTTHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTHHHHHS
T ss_pred HHHHHHHHHHHHHhhccchhHHHHHHHHHhhhhhhhHHHHhcccchhhhHHHHHhccCCCHHHHHHHHHHHHHHHHHhhh
Confidence 3444567788888889999999977766666666544332 12356899999999999999999999888766654332
Q ss_pred ---hHHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcch--hhHHhHHHHHHhhhcCCCcchhhheee
Q 004157 438 ---RTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGT--RKRVLINAFTVRALRDTFSPARGAAKI 505 (771)
Q Consensus 438 ---~~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~--~~~vL~~af~~~~lkD~f~~~R~a~l~ 505 (771)
......+++.|.+...|+.+.||.+++.+|+.+++..+..- -..-+++.+. +.+++.....+...+.
T Consensus 470 ~~~~~~~~~~l~~ll~~l~d~~~~V~~~a~~al~~l~~~~~~~l~p~~~~il~~l~-~~l~~~~~~~~~~~~~ 541 (888)
T d1qbkb_ 470 QPPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLV-FAFSKYQHKNLLILYD 541 (888)
T ss_dssp SCHHHHTTTHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTTSSGGGHHHHHHHHH-HHTTTCCHHHHHHHHH
T ss_pred hhhhhhhhhhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHH-HHHhhhhHHHHHHHHH
Confidence 22344577777777789999999999999999998877542 2344567777 7888887776665443
|
| >d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: PBS lyase HEAT-like repeat domain: MTH187 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=96.04 E-value=0.0043 Score=52.77 Aligned_cols=86 Identities=19% Similarity=0.212 Sum_probs=68.5
Q ss_pred hHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHH
Q 004157 366 VLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLL 445 (771)
Q Consensus 366 i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL 445 (771)
.++.|.+++.+.|+.||...+.-|-.+ . ....+|.+..++.|.++.||..++.++-.+-+ .+.+
T Consensus 23 ~~~~L~~~l~d~~~~vR~~a~~~L~~~----~----~~~~~~~L~~~l~d~~~~VR~~a~~aL~~i~~--------~~~~ 86 (111)
T d1te4a_ 23 AFEPLLESLSNEDWRIRGAAAWIIGNF----Q----DERAVEPLIKLLEDDSGFVRSGAARSLEQIGG--------ERVR 86 (111)
T ss_dssp THHHHHHGGGCSCHHHHHHHHHHHGGG----C----SHHHHHHHHHHHHHCCTHHHHHHHHHHHHHCS--------HHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHhc----c----hhhhHHHHHhhhccchhHHHHHHHHHHHHhCc--------cchH
Confidence 456788889999999998887765432 2 23467889999999999999999999976632 4677
Q ss_pred HHHHhhccCCCCcchhhHHHHH
Q 004157 446 KYLSKLQVDEEPAIRTNTTILL 467 (771)
Q Consensus 446 ~~laklq~D~~~~IRtnt~icl 467 (771)
+.|.++..|+++.||-.++..|
T Consensus 87 ~~L~~ll~d~~~~vr~~A~~aL 108 (111)
T d1te4a_ 87 AAMEKLAETGTGFARKVAVNYL 108 (111)
T ss_dssp HHHHHHTTSCCTHHHHHHHHHG
T ss_pred HHHHHHHcCCCHHHHHHHHHHH
Confidence 8888888999999998877655
|
| >d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: PBS lyase HEAT-like repeat domain: Hypothetical protein YibA species: Escherichia coli [TaxId: 562]
Probab=95.66 E-value=0.015 Score=56.55 Aligned_cols=91 Identities=14% Similarity=0.062 Sum_probs=71.4
Q ss_pred cHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHHhH
Q 004157 405 VYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLI 484 (771)
Q Consensus 405 I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~vL~ 484 (771)
-...|+..++|.++.||..++..+..+-. .+.++.|.++..|+++.||...+..|+++...-.. ...++.
T Consensus 20 ~~~~L~~~L~d~~~~vR~~A~~~L~~~~~--------~~~~~~l~~~l~d~~~~vr~~a~~aL~~l~~~~~~--~~~~~~ 89 (276)
T d1oyza_ 20 NDDELFRLLDDHNSLKRISSARVLQLRGG--------QDAVRLAIEFCSDKNYIRRDIGAFILGQIKICKKC--EDNVFN 89 (276)
T ss_dssp CHHHHHHHTTCSSHHHHHHHHHHHHHHCC--------HHHHHHHHHHHTCSSHHHHHHHHHHHHHSCCCTTT--HHHHHH
T ss_pred CHHHHHHHhcCCCHHHHHHHHHHHHhhCC--------HhHHHHHHHHHcCCCHHHHHHHHHHHHHhcccccc--ccchHH
Confidence 34578899999999999999999876642 45678888888999999999999999998643222 233333
Q ss_pred HHHHHhhhcCCCcchhhheeee
Q 004157 485 NAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 485 ~af~~~~lkD~f~~~R~a~l~a 506 (771)
..+. ..++|+.+.+|.+++.+
T Consensus 90 ~l~~-~~l~d~~~~vr~~a~~a 110 (276)
T d1oyza_ 90 ILNN-MALNDKSACVRATAIES 110 (276)
T ss_dssp HHHH-HHHHCSCHHHHHHHHHH
T ss_pred HHHH-HHhcCCChhHHHHHHHH
Confidence 4455 78899999999999888
|
| >d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin beta species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.39 E-value=0.11 Score=58.08 Aligned_cols=169 Identities=10% Similarity=0.113 Sum_probs=124.9
Q ss_pred hhhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhh---hhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCC
Q 004157 359 TEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQV---VDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKL 435 (771)
Q Consensus 359 ~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~---v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL 435 (771)
...+...+++.+...+..++..+|...++.|..+++...... +.+-++..+..++.+.++.+|..++..+..++...
T Consensus 218 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~v~~~~~~~l~~l~~~~ 297 (861)
T d2bpta1 218 REGERNYLMQVVCEATQAEDIEVQAAAFGCLCKIMSKYYTFMKPYMEQALYALTIATMKSPNDKVASMTVEFWSTICEEE 297 (861)
T ss_dssp SHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHGGGCHHHHHHTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhHHHHhHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHH
Confidence 345667788889999999999999999999999888776543 33445666788999999999998877665543321
Q ss_pred Ch-------------------hHHhHHHHHHHHhhcc-------CCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHH
Q 004157 436 SQ-------------------RTISGSLLKYLSKLQV-------DEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTV 489 (771)
Q Consensus 436 ~~-------------------~~l~~~LL~~laklq~-------D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~ 489 (771)
.. .....++++.+..+.. |.+..+|.....|+..++..++... ...+.+.+.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~- 375 (861)
T d2bpta1 298 IDIAYELAQFPQSPLQSYNFALSSIKDVVPNLLNLLTRQNEDPEDDDWNVSMSAGACLQLFAQNCGNHI-LEPVLEFVE- 375 (861)
T ss_dssp HHHHHHHHHCTTCSCCCCCHHHHHHHHHHHHHHHHTTCCCCC-CCCCCHHHHHHHHHHHHHHHHHGGGG-HHHHHHHHH-
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHhhcchhh-hhhhcchhh-
Confidence 10 1223455555554433 1245799999999999999998765 445677777
Q ss_pred hhhcCCCcchhhheeee-----c---------c--------------CCHHHHHHHHHHHHHHHHHHH
Q 004157 490 RALRDTFSPARGAAKIL-----S---------Y--------------LNCDVRSKAFQAVDQFLQIVK 529 (771)
Q Consensus 490 ~~lkD~f~~~R~a~l~a-----~---------~--------------~~~~VR~~a~~~~~~~l~~l~ 529 (771)
..+.++.+..|.+++.+ . | .+..||..|..++..+.+.+.
T Consensus 376 ~~~~~~~~~~~~~a~~~l~~i~~~~~~~~~~~~l~~~l~~l~~~l~d~~~~vr~~a~~~l~~l~~~~~ 443 (861)
T d2bpta1 376 QNITADNWRNREAAVMAFGSIMDGPDKVQRTYYVHQALPSILNLMNDQSLQVKETTAWCIGRIADSVA 443 (861)
T ss_dssp HHTTCSSHHHHHHHHHHHHHTSSSSCHHHHHHHHHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHG
T ss_pred hhhhhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhcCcchhhhhHHHHHHHHHHHHhc
Confidence 78999999999999887 0 1 788999999999988877654
|
| >d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin beta species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.28 E-value=0.25 Score=55.07 Aligned_cols=141 Identities=11% Similarity=0.068 Sum_probs=68.3
Q ss_pred hhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhc-ChhhhhhccHHHHHhhcCCCc-HHHHHHHHHHHHhhccCCChh---
Q 004157 364 VKVLPTIVKLFASNDRAIRVALLQHIDQYGQSF-SAQVVDEQVYPHVATGFADTS-AFLREMTLKSMLVLAPKLSQR--- 438 (771)
Q Consensus 364 ~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l-~~~~v~~~I~p~l~~gf~D~~-~~iRe~tlk~i~~l~~kL~~~--- 438 (771)
..|...+...+..+++.||-.+.+-+..++..- +..... .++|.++..+.+.+ ..+|+.++..+-.++..++..
T Consensus 94 ~~ik~~ll~~l~~~~~~vr~~~a~~i~~i~~~~~p~~~wp-eli~~L~~~~~s~~~~~~~~~al~~l~~i~e~~~~~~~~ 172 (861)
T d2bpta1 94 NQIKTNALTALVSIEPRIANAAAQLIAAIADIELPHGAWP-ELMKIMVDNTGAEQPENVKRASLLALGYMCESADPQSQA 172 (861)
T ss_dssp HHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHGGGTCCH-HHHHHHHHHTSTTSCHHHHHHHHHHHHHHHHTSSTTSST
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhCCcCchH-HHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 334555555555666666665555555554432 111111 25555555555443 445666665555554443321
Q ss_pred ---HHhHHHHHHHHhhcc-CCCCcchhhHHHHHHHhhhccCcch----hhHHhHHHHHHhhhcCCCcchhhheeee
Q 004157 439 ---TISGSLLKYLSKLQV-DEEPAIRTNTTILLGNIASHLNEGT----RKRVLINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 439 ---~l~~~LL~~laklq~-D~~~~IRtnt~icl~kia~~L~~~~----~~~vL~~af~~~~lkD~f~~~R~a~l~a 506 (771)
.+.+-|...+..+.. +....||..++-|++.+..++.... -...++..+. ..++|+....|.+++.+
T Consensus 173 ~~~~~~~il~~i~~~~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~ 247 (861)
T d2bpta1 173 LVSSSNNILIAIVQGAQSTETSKAVRLAALNALADSLIFIKNNMEREGERNYLMQVVC-EATQAEDIEVQAAAFGC 247 (861)
T ss_dssp TGGGHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHGGGCHHHHTSHHHHHHHHHHHH-HHHTCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHhHhHHhhhhhhHHHHhHH-HHhcCCCHHHHHHHHHH
Confidence 122222222222332 3445666666666666666554321 1122344444 56666666666655544
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=93.98 E-value=0.12 Score=52.24 Aligned_cols=39 Identities=5% Similarity=-0.130 Sum_probs=27.7
Q ss_pred EEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC
Q 004157 35 SHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR 77 (771)
Q Consensus 35 tVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr 77 (771)
.||+.+. .+|+.|++|+....... .+.+..|+..+..|.
T Consensus 37 ~vy~v~~-~dg~~~VlK~~rp~~~s---~~~i~~E~~~l~~L~ 75 (325)
T d1zyla1 37 RVYQFQD-EDRRRFVVKFYRPERWT---ADQILEEHQFALQLV 75 (325)
T ss_dssp EEEEECC-TTCCCEEEEEECTTTSC---HHHHHHHHHHHHHHH
T ss_pred eeEEEEc-CCCCEEEEEEeCCCCCC---HHHHHHHHHHHHHHH
Confidence 7999986 47899999998753222 334566777777775
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=93.88 E-value=0.063 Score=56.06 Aligned_cols=71 Identities=6% Similarity=-0.138 Sum_probs=41.2
Q ss_pred ceecCCCCCCCCceEEEEeEECC-------CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecc
Q 004157 21 YNIGDPYPSAWGSWSHFQGTSKD-------DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVEN 92 (771)
Q Consensus 21 Y~i~e~ig~G~g~wtVy~g~~k~-------~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~ 92 (771)
.+|. +++.|-. -.+|+..... .+..|.+.++-.. .. .-...+|.++++.|. +.-..+++.++..
T Consensus 45 l~v~-~l~GGlt-N~~y~v~~~~~~~~~~~~~~~vllRi~g~~-~~---~idr~~E~~i~~~ls~~gl~Pkll~~~~~-- 116 (395)
T d1nw1a_ 45 LRIS-RIKGGMS-NMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ET---ESHLVAESVIFTLLSERHLGPKLYGIFSG-- 116 (395)
T ss_dssp EEEE-EECCCTT-EEEEEEEECTTSCCSSSCCSEEEEEEECSC-CC---HHHHHHHHHHHHHHHHTTSSSCEEEEETT--
T ss_pred eEEE-EcCCccc-cceEEEEeCCCCccccCCCCcEEEEecCCc-ch---hhHHHHHHHHHHHHHhCCCCCeEEEEcCC--
Confidence 4443 4554432 1788887643 2355767776522 11 123567888888885 4334567766542
Q ss_pred cCcCCcccEEEEEecCC
Q 004157 93 IDATSTKITIYIVTEPV 109 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v 109 (771)
.+|+||+
T Consensus 117 ----------g~I~efi 123 (395)
T d1nw1a_ 117 ----------GRLEEYI 123 (395)
T ss_dssp ----------EEEECCC
T ss_pred ----------ceEEEEe
Confidence 6788988
|
| >d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Plakophilin 1 helical region domain: Plakophilin 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.72 E-value=0.19 Score=50.93 Aligned_cols=109 Identities=15% Similarity=0.067 Sum_probs=82.7
Q ss_pred HHHHHHhhcCCcHHHHHHHHHhHHHHHhh---cChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChh---HH
Q 004157 367 LPTIVKLFASNDRAIRVALLQHIDQYGQS---FSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQR---TI 440 (771)
Q Consensus 367 ~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~---l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~---~l 440 (771)
+|.++++..+.|+.++...+..|-.+... .-...+....+|.|+..+.+.++.+|+.++.++..++..-++. ..
T Consensus 4 ip~lv~~L~~~~~~~~~~a~~~l~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~aL~~L~~~~~~~~~~i~ 83 (457)
T d1xm9a1 4 IPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETR 83 (457)
T ss_dssp HHHHHHHHHSSCTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCcHHHHHHHHCCCCHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 79999999999999999988888777632 2334455567899999999999999999999999887443331 12
Q ss_pred hHHHHHHHHhhc-cCCCCcchhhHHHHHHHhhhccC
Q 004157 441 SGSLLKYLSKLQ-VDEEPAIRTNTTILLGNIASHLN 475 (771)
Q Consensus 441 ~~~LL~~laklq-~D~~~~IRtnt~icl~kia~~L~ 475 (771)
....++.|-++. .+.++.+|..++-||..++..-.
T Consensus 84 ~~g~v~~li~~l~~~~~~~~~~~a~~~l~~l~~~~~ 119 (457)
T d1xm9a1 84 RQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE 119 (457)
T ss_dssp HTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSSS
T ss_pred HCCChHHHHHHHhccCcHHHHHHHHHHHHHHHhhhh
Confidence 222345555544 46778999999999999998654
|
| >d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HspBP1 domain domain: Hsp70-binding protein 1 (HspBP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.55 E-value=0.1 Score=50.88 Aligned_cols=112 Identities=13% Similarity=0.109 Sum_probs=88.6
Q ss_pred hhhhHHHHHHhhc-CCcHHHHHHHHHhHHHHHhhcCh---hhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCC--
Q 004157 363 SVKVLPTIVKLFA-SNDRAIRVALLQHIDQYGQSFSA---QVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLS-- 436 (771)
Q Consensus 363 ~~~i~P~i~~lF~-~~Dr~iR~~LL~~l~~~~~~l~~---~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~-- 436 (771)
...++|.|++++. ..+..+|...+.-+..++...+. ..+....++.++..+.+.+..+++.++..+..++-.-.
T Consensus 99 ~~~~i~~Lv~lL~~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~~gi~~L~~lL~~~~~~~~~~a~~~L~~l~~~~~~~ 178 (264)
T d1xqra1 99 GLGALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEH 178 (264)
T ss_dssp HTTHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGG
T ss_pred HcCchHHHHHHhhcCCCHHHHHHHHHHHHHHhccchhhHHHHHHhhhhhHHHHHHhcCchHHHHHHHHHHHHHHhccHHH
Confidence 3457899999885 57788888877777777766543 34567789999999999999999999988887764322
Q ss_pred -hhHHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhcc
Q 004157 437 -QRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHL 474 (771)
Q Consensus 437 -~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L 474 (771)
...++...++.|..+..++++.+|.+++.+|+.|+..-
T Consensus 179 ~~~~~~~~~v~~L~~lL~~~~~~~~~~a~~aL~~L~~~~ 217 (264)
T d1xqra1 179 KGTLCSMGMVQQLVALVRTEHSPFHEHVLGALCSLVTDF 217 (264)
T ss_dssp HHHHHHTTHHHHHHHHHTSCCSTHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhhhHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC
Confidence 23445568899999999999999999999999998543
|
| >d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Leucine-rich repeat variant domain: Leucine-rich repeat variant species: Azotobacter vinelandii [TaxId: 354]
Probab=93.23 E-value=0.0075 Score=58.86 Aligned_cols=104 Identities=20% Similarity=0.205 Sum_probs=60.9
Q ss_pred HHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHHHHH
Q 004157 369 TIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYL 448 (771)
Q Consensus 369 ~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL~~l 448 (771)
.+..+..++|+.||....+++ +. +.+...+.|.++.||...++.+. . +.|
T Consensus 118 ~L~~Ll~D~d~~VR~~aa~~~-------~~--------~~L~~L~~D~d~~VR~~aA~~~~-------~--------~~L 167 (233)
T d1lrva_ 118 QLEQMAADRDYLVRAYVVQRI-------PP--------GRLFRFMRDEDRQVRKLVAKRLP-------E--------ESL 167 (233)
T ss_dssp GGGGGTTCSSHHHHHHHHHHS-------CG--------GGGGGTTTCSCHHHHHHHHHHSC-------G--------GGG
T ss_pred HHHHHhcCCCHHHHHHHHhcc-------ch--------hHHHHHhcCCCHHHHHHHHHhcC-------H--------HHH
Confidence 355566677777777766542 21 22345566777777776655321 1 335
Q ss_pred HhhccCCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCCcchhhheeee-------cc--CCHHHHHHHH
Q 004157 449 SKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL-------SY--LNCDVRSKAF 518 (771)
Q Consensus 449 aklq~D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R~a~l~a-------~~--~~~~VR~~a~ 518 (771)
.++..|+++.||.+++-- |+. +.+. ++++|+.+.+|.++... .. ++..||..|.
T Consensus 168 ~~l~~D~d~~VR~~aa~~-------L~~--------~~L~-~l~~D~d~~VR~aaae~~~~~ll~~L~D~d~~VR~aA~ 230 (233)
T d1lrva_ 168 GLMTQDPEPEVRRIVASR-------LRG--------DDLL-ELLHDPDWTVRLAAVEHASLEALRELDEPDPEVRLAIA 230 (233)
T ss_dssp GGSTTCSSHHHHHHHHHH-------CCG--------GGGG-GGGGCSSHHHHHHHHHHSCHHHHHHCCCCCHHHHHHHH
T ss_pred HHHccCCCHHHHHHHHHh-------cCc--------HHHH-HHHhCCCHHHHHHHHHhccHHHHHHhCCCCHHHHHHHH
Confidence 566677777777766532 221 3445 67777777777776544 11 6777777664
|
| >d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: beta-Catenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.04 E-value=0.49 Score=50.17 Aligned_cols=183 Identities=13% Similarity=0.026 Sum_probs=121.0
Q ss_pred hhhhhhhHHHHHHHHhcCCCCc--hhhHHHHHhccCC--Chhhh-hhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcC
Q 004157 323 QIVLKKLLPLLASALEFGSAAA--PALTALLKMGSWL--STEEF-SVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFS 397 (771)
Q Consensus 323 ~~~~~kILP~Ll~~~~~~~~~~--~~L~~ll~i~~~l--~~eef-~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~ 397 (771)
.++..-.+|.|+..+..+.... .++..+..++..- ....+ ..-.+|.++.++...+..++...+.-+..+...-.
T Consensus 96 ~i~~~g~i~~Li~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~ 175 (529)
T d1jdha_ 96 AIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQ 175 (529)
T ss_dssp HHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCTTHHHHHHHHTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHCCCHHHHHHHhCCCCHHHHHHHHHHHHHhhcccchhhhHHHhcCCchHHHHHHHccChHHHHHHHHHHHHHhhhhh
Confidence 3444557889988876543211 1222222333221 22333 44578999999999999888877777766653321
Q ss_pred ---hhhhhhccHHHHHhhcCC-CcHHHHHHHHHHHHhhccC--CChhHHhHHHHHHHHhhccCCCCcchhhHHHHHHHhh
Q 004157 398 ---AQVVDEQVYPHVATGFAD-TSAFLREMTLKSMLVLAPK--LSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIA 471 (771)
Q Consensus 398 ---~~~v~~~I~p~l~~gf~D-~~~~iRe~tlk~i~~l~~k--L~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kia 471 (771)
...+....++.++..+.. ....+++.++..+-.+.-. .....+....++.|.++..+++..++.+++-|+..++
T Consensus 176 ~~~~~~~~~~~~~~L~~ll~~~~~~~~~~~~~~~l~~ls~~~~~~~~~~~~g~~~~L~~ll~~~~~~~~~~a~~~l~~ls 255 (529)
T d1jdha_ 176 ESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLS 255 (529)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSTTHHHHHHHTTHHHHHHTTTTSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcccchHHHHHHHhhhhHHHHHHHHHHHhhhhccccccchhhhhhhhhhHHHHhcccchhhhhhhhhHHHhcc
Confidence 223444567777777754 4467888887777766532 2223455567888888888888999999999999998
Q ss_pred hccCcchhhHHhHHHHHHhhhcCCCcchhhheeee
Q 004157 472 SHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 472 ~~L~~~~~~~vL~~af~~~~lkD~f~~~R~a~l~a 506 (771)
..-.......-+++.+. +.+++....+|..++.+
T Consensus 256 ~~~~~~~~~~~~i~~Lv-~ll~~~~~~~~~~a~~~ 289 (529)
T d1jdha_ 256 DAATKQEGMEGLLGTLV-QLLGSDDINVVTCAAGI 289 (529)
T ss_dssp TTCTTCSCCHHHHHHHH-HHTTCSCHHHHHHHHHH
T ss_pred ccccchhhhhhcchhhh-hhcccccHHHHHHHHHH
Confidence 76655443445688888 89998888888877665
|
| >d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: beta-Catenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.85 E-value=0.21 Score=53.32 Aligned_cols=146 Identities=12% Similarity=0.114 Sum_probs=100.4
Q ss_pred hhhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcCh--hhhh-hccHHHHHhhcCC-CcHHHHHHHHHHHHhhccC
Q 004157 359 TEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSA--QVVD-EQVYPHVATGFAD-TSAFLREMTLKSMLVLAPK 434 (771)
Q Consensus 359 ~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~--~~v~-~~I~p~l~~gf~D-~~~~iRe~tlk~i~~l~~k 434 (771)
.-++....+|.|+++....|..+|..-+.-+..+..+-.. ..+. ..++|.++..+.+ .++.+|+.++..+..++..
T Consensus 11 ~~~~~~~aip~L~~lL~~~~~~v~~~A~~~l~~l~~~~~~~~~~~~~~~~v~~l~~~L~~~~~~~~~~~a~~~L~~l~~~ 90 (529)
T d1jdha_ 11 DAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHH 90 (529)
T ss_dssp ------CHHHHHHHHHTCSCHHHHHHHHHHHHHHHTSHHHHHHHHTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTS
T ss_pred cHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccHHHHHHHHhhhHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCC
Confidence 4467778889999999988988887777777676543221 1122 2478888888865 4678999999988887642
Q ss_pred CCh--hHHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHH----hHHHHHHhhhcCCCcchhhheeee
Q 004157 435 LSQ--RTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRV----LINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 435 L~~--~~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~v----L~~af~~~~lkD~f~~~R~a~l~a 506 (771)
-.. ..+....+|.|-++-.++++.++.+++-+|+.|+..-.. .|+.+ .++.+. ..|+++....|..+..+
T Consensus 91 ~~~~~~i~~~g~i~~Li~lL~~~~~~v~~~a~~aL~~l~~~~~~-~~~~~~~~g~i~~Lv-~lL~~~~~~~~~~a~~~ 166 (529)
T d1jdha_ 91 REGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEG-AKMAVRLAGGLQKMV-ALLNKTNVKFLAITTDC 166 (529)
T ss_dssp HHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCTT-HHHHHHHHTHHHHHH-HGGGCCCHHHHHHHHHH
T ss_pred chhHHHHHHCCCHHHHHHHhCCCCHHHHHHHHHHHHHhhcccch-hhhHHHhcCCchHHH-HHHHccChHHHHHHHHH
Confidence 221 234445678888877888899999999999998865332 23322 367777 88999998888887776
|
| >d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Leucine-rich repeat variant domain: Leucine-rich repeat variant species: Azotobacter vinelandii [TaxId: 354]
Probab=88.81 E-value=0.058 Score=52.27 Aligned_cols=91 Identities=15% Similarity=0.148 Sum_probs=68.0
Q ss_pred HHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHHHH
Q 004157 368 PTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKY 447 (771)
Q Consensus 368 P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL~~ 447 (771)
+.+..+...+|+.||..+..++ + .+.+...+.|.++.||..++..+. . +.
T Consensus 141 ~~L~~L~~D~d~~VR~~aA~~~-------~--------~~~L~~l~~D~d~~VR~~aa~~L~-------~--------~~ 190 (233)
T d1lrva_ 141 GRLFRFMRDEDRQVRKLVAKRL-------P--------EESLGLMTQDPEPEVRRIVASRLR-------G--------DD 190 (233)
T ss_dssp GGGGGTTTCSCHHHHHHHHHHS-------C--------GGGGGGSTTCSSHHHHHHHHHHCC-------G--------GG
T ss_pred hHHHHHhcCCCHHHHHHHHHhc-------C--------HHHHHHHccCCCHHHHHHHHHhcC-------c--------HH
Confidence 4466788899999998887643 2 245677889999999999887753 1 35
Q ss_pred HHhhccCCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCCcchhhheee
Q 004157 448 LSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKI 505 (771)
Q Consensus 448 laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R~a~l~ 505 (771)
|.++..|++..||...+ .++ .+.+. +.|+|+.+.+|.+++.
T Consensus 191 L~~l~~D~d~~VR~aaa-------e~~---------~~~ll-~~L~D~d~~VR~aA~~ 231 (233)
T d1lrva_ 191 LLELLHDPDWTVRLAAV-------EHA---------SLEAL-RELDEPDPEVRLAIAG 231 (233)
T ss_dssp GGGGGGCSSHHHHHHHH-------HHS---------CHHHH-HHCCCCCHHHHHHHHC
T ss_pred HHHHHhCCCHHHHHHHH-------Hhc---------cHHHH-HHhCCCCHHHHHHHHH
Confidence 67778899999998765 222 23445 6899999999998764
|
| >d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Plakophilin 1 helical region domain: Plakophilin 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.13 E-value=0.63 Score=46.72 Aligned_cols=100 Identities=10% Similarity=0.007 Sum_probs=72.0
Q ss_pred cHHHHHhhcCCCcHHHHHHHHHHHHhhccC---CChhHHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhH
Q 004157 405 VYPHVATGFADTSAFLREMTLKSMLVLAPK---LSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKR 481 (771)
Q Consensus 405 I~p~l~~gf~D~~~~iRe~tlk~i~~l~~k---L~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~ 481 (771)
-+|.++..+.+.++.+|..++..|-.++-. .-........+|.|.++-.++.+.||.+++-||++|+..- ...+..
T Consensus 3 ~ip~lv~~L~~~~~~~~~~a~~~l~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~aL~~L~~~~-~~~~~~ 81 (457)
T d1xm9a1 3 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRS-TTNKLE 81 (457)
T ss_dssp CHHHHHHHHHSSCTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSC-HHHHHH
T ss_pred CHHHHHHHhCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCcHHHHHHHHCCCCHHHHHHHHHHHHHHHcCC-HHHHHH
Confidence 379999999999999999999999999833 2223344455788888888999999999999999998322 223333
Q ss_pred Hh----HHHHHHhhhc-CCCcchhhheeee
Q 004157 482 VL----INAFTVRALR-DTFSPARGAAKIL 506 (771)
Q Consensus 482 vL----~~af~~~~lk-D~f~~~R~a~l~a 506 (771)
+. ++.+. ..++ +....+|..++.+
T Consensus 82 i~~~g~v~~li-~~l~~~~~~~~~~~a~~~ 110 (457)
T d1xm9a1 82 TRRQNGIREAV-SLLRRTGNAEIQKQLTGL 110 (457)
T ss_dssp HHHTTCHHHHH-HHHTTCCCHHHHHHHHHH
T ss_pred HHHCCChHHHH-HHHhccCcHHHHHHHHHH
Confidence 32 56666 5554 4445556555554
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=86.12 E-value=0.11 Score=52.14 Aligned_cols=30 Identities=13% Similarity=0.098 Sum_probs=26.8
Q ss_pred CCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 148 CKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 148 ~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
.++||||+.++||+++.++..-+.||+.+.
T Consensus 183 ~giIHgDl~~dNvl~~~~~v~gvIDF~~~~ 212 (316)
T d2ppqa1 183 AGVIHADLFQDNVFFLGDELSGLIDFYFAC 212 (316)
T ss_dssp EEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred cccccCCcchhhhhcccccceeEecccccc
Confidence 379999999999999988777899999875
|