Citrus Sinensis ID: 004253

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-----

MVYASGIRLPCVPHLYKSSAPSGFNGDRRSTSLSFLLKKDSFSRKIFAGKSSKEFDASPLIITASEKVLVPGSQSDDPSAVTDQLETPETVSEDIEVRNGIESLQMEDNENVEIEDHGPVTLQGKVSSEKSEVKREVGPRSIPPPGAGQNIYEIDPNLLGHRQHLDYRYGRYKQMCEDIDKYEGGLAAFSRGYEKFGFIRSDTGITYREWAPGAKSASLIGDFNNWNPNADIMTQNEFGVWEIFLPNNADGSPPIPHGSRVKIHMDTPSGIKDSIPAWIKFSVQAPGEIPYNGIYYDPPEEEKYVFQHPQPKKPKSLRIYEAHVGMSSTEPIINTYANFRDDVLPRIKRLGYNAVQIMAVQEHSYYASFGYHVTNFFAPSSRCGTPDDLKSLIDKAHELGLLVLMDIVHSHASNNVLDGLNMFDGTDGHYFHSGSRGYHWMWDSRLFNYGSWEVLRFLLSNARWWLEEYKFDGFRFDGVTSMMYTHHGLQVAFTGNYSEYFGFATDVDAVVYLMLVNDMIHGLYPEAVSIGEDVSGMPTFCIPVQDGGVGFDYRLQMAIADKWIELLKKRDEDWKMGAIVHTMTNRRWLEKCVAYAESHDQALVGDKTIAFWLMDKDMYDFMALDRPSTPRIDRGIALHKMIRLVTMGLGGEAYLNFMGNEFGHPEWIDFPRGDQRLPNGQFVPGNNFSYDKCRRRFDLGDADYLRYRGMQEFDRAMQHLEEKYGFMTSEHQYVSRKDQGDRGGMMTDLIPSWYMRQAERLWSML

cEEEcccccccccccccccccccccccccccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccEEEcccccEEEEEccccccccEEcccccccccccccccEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHcccEEccccEEEEEEcccccEEEEEccccccccccccccccccccEEEEEccccccccccccccccEEEEEcccccEEccccccEEEEEcccccccccccccccccHHHHcccccccccccccEEEEEccccccccccccHHHHHHHHHHHHHHccccEEEEEcccccccccccccccccccccccccccHHHHHHHHHHHHHcccEEEEEEccccccccHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccEEEHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccEEEEEccccccccccccccccccccccccccccHHHHHHHcccccccccccEEEEEEEcccccccEEEEcccccHHccHHHHHHHcccHHHHHHccccccccccHHHHHHHHHHHHHHHHHccccccEEEccccccccccccccccccccccccccccccccHHHHHHccccccccccccHHHHHHHHHHHHHHHHcccccccccEEEEccccccEEcccccHHHHHHHHHHHHHccc

cEEEccEEccccccccccccccccccccccccccEEEEccccccEEEEEccccccccccHEEcccccEEEcccccccccccHHHccccccccccccccccEEEEEccccccEEEcccccEEEcccccccccccccccccEEcccccccccEEEcccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcccccccccEEEEEEccccEEEEEEEccccccccccccccccccEEEEEEccccccccccccccEEEEEEEccccccccccHHHHHEcccccccccccEEcccccHHHccccccccccccccEEEEEEEcccccccccccHHHHHHHHHHHHHHccccEEEEEEHHccccccccccccccccccccccccHHHHHHHHHHHHHcccEEEEEEccccccccccccccccccccccEccccccccccccccHHEcccHHHHHHHHHHHHHHHHHHHccccEEEccHHHHHEHcccccccccccccHHccccccHHHHHHHHHHHHHHHHHccccEEEEEccccccccccccccccccccHHHHccccHHHHHHHHcccHccccccEEEEEEcHHccccEEEEEcccccEEEcccHHHHHEHcccccccccccccccHHHHHHHHHHHHHHHHHHHcccccEEEccccccccccHccccccccHcccccccccccccHHHHEHHHcccccHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEcccccEEEEEEcccccHHHccHHHHHHHc

mvyasgirlpcvphlykssapsgfngdrrSTSLSFllkkdsfsrkifagksskefdaspliitasekvlvpgsqsddpsavtdqletpetvsedieVRNGieslqmednenveiedhgpvtlqgkvsseksevkrevgprsipppgagqniyeidpnllghrqhlDYRYGRYKQMCEDIDKYEGGLAAFSRGyekfgfirsdtgityrewapgaksasligdfnnwnpnadimtqnefgvweiflpnnadgsppiphgsrvkihmdtpsgikdsipawikfsvqapgeipyngiyydppeeekyvfqhpqpkkpkslrIYEAHvgmsstepiintyanfrddVLPRIKRLGYNAVQIMAVQEHSYYAsfgyhvtnffapssrcgtpddLKSLIDKAHELGLLVLMDIVHShasnnvldglnmfdgtdghyfhsgsrgyhwmwdsrlfnygSWEVLRFLLSNARWWLEeykfdgfrfdgvtsmmythhglqvaftgnyseyfgfatdVDAVVYLMLVNDMIHglypeavsigedvsgmptfcipvqdggvgfdYRLQMAIADKWIELLKKRDEDWKMGAIVHTMTNRRWLEKCVAYAESHDQALVGDKTIAFWLMDKdmydfmaldrpstpridrGIALHKMIRLVTMGLGGEAYLNFmgnefghpewidfprgdqrlpngqfvpgnnfsydkcrrrfdlgdadylRYRGMQEFDRAMQHLEEKYgfmtsehqyvsrkdqgdrggmmtdliPSWYMRQAERLWSML

mvyasgirlpcvphlykssapsgfngDRRSTSLSfllkkdsfsrkifagksskefdaspLIITASEkvlvpgsqsddpsavtdqletpetvsedievRNGIESLQMednenveiedhgpvtlqgkvsseksevkrevgprsipppgagqniYEIDPNLLGHRQHLDYRYGRYKQMCEDIDKYEGGLAAFSRGYEKFGFIRSDTGITYREWAPGAKSASLIGDFNNWNPNADIMTQNEFGVWEIFLPNNADGSPPIPHGSRVKIHMDTPSGIKDSIPAWIKFSVQAPGEIPYNGIYYDPPEEEKYVFQHPQPKKPKSLRIYEAHVGMSSTEPIINTYANFRDDVLPRIKRLGYNAVQIMAVQEHSYYASFGYHVTNFFAPSSRCGTPDDLKSLIDKAHELGLLVLMDIVHSHASNNVLDGLNMFDGTDGHYFHSGSRGYHWMWDSRLFNYGSWEVLRFLLSNARWWLEEYKFDGFRFDGVTSMMYTHHGLQVAFTGNYSEYFGFATDVDAVVYLMLVNDMIHGLYPEAVSIGEDVSGMPTFCIPVQDGGVGFDYRLQMAIADKWIELLKKRDEDWKMGAIVHTMTNRRWLEKCVAYAESHDQALVGDKTIAFWLMDKDMYDFMALDRPSTPRIDRGIALHKMIRLVTMGLGGEAYLNFMGNEFGHPEWIDFPRGDQRLPNGQFvpgnnfsydkcrrRFDLGDADYLRYRGMQEFDRAMQHLEEKYGFMTSEHQYvsrkdqgdrggMMTDLIPSWYMRQAERLWSML

MVYASGIRLPCVPHLYKSSAPSGFNGDRRstslsfllkkdsfsrkIFAGKSSKEFDASPLIITASEKVLVPGSQSDDPSAVTDQLETPETVSEDIEVRNGIESLQMEDNENVEIEDHGPVTLQGKVSSEKSEVKREVGPRSIPPPGAGQNIYEIDPNLLGHRQHLDYRYGRYKQMCEDIDKYEGGLAAFSRGYEKFGFIRSDTGITYREWAPGAKSASLIGDFNNWNPNADIMTQNEFGVWEIFLPNNADGSPPIPHGSRVKIHMDTPSGIKDSIPAWIKFSVQAPGEIPYNGIYYDPPEEEKYVFQHPQPKKPKSLRIYEAHVGMSSTEPIINTYANFRDDVLPRIKRLGYNAVQIMAVQEHSYYASFGYHVTNFFAPSSRCGTPDDLKSLIDKAHELGLLVLMDIVHSHASNNVLDGLNMFDGTDGHYFHSGSRGYHWMWDSRLFNYGSWEVLRFLLSNARWWLEEYKFDGFRFDGVTSMMYTHHGLQVAFTGNYSEYFGFATDVDAVVYLMLVNDMIHGLYPEAVSIGEDVSGMPTFCIPVQDGGVGFDYRLQMAIADKWIELLKKRDEDWKMGAIVHTMTNRRWLEKCVAYAESHDQALVGDKTIAFWLMDKDMYDFMALDRPSTPRIDRGIALHKMIRLVTMGLGGEAYLNFMGNEFGHPEWIDFPRGDQRLPNGQFVPGNNFSYDKCRRRFDLGDADYLRYRGMQEFDRAMQHLEEKYGFMTSEHQYVSRKDQGDRGGMMTDLIPSWYMRQAERLWSML

*****GIRLPCVPHLY********************************************II***************************************************************************************NIYEIDPNLLGHRQHLDYRYGRYKQMCEDIDKYEGGLAAFSRGYEKFGFIRSDTGITYREWAPGAKSASLIGDFNNWNPNADIMTQNEFGVWEIFLPN**********************GIKDSIPAWIKFSVQAPGEIPYNGIYYDP*****YV***********LRIYEAHVGMSSTEPIINTYANFRDDVLPRIKRLGYNAVQIMAVQEHSYYASFGYHVTNFFAPSSRCGTPDDLKSLIDKAHELGLLVLMDIVHSHASNNVLDGLNMFDGTDGHYFHSGSRGYHWMWDSRLFNYGSWEVLRFLLSNARWWLEEYKFDGFRFDGVTSMMYTHHGLQVAFTGNYSEYFGFATDVDAVVYLMLVNDMIHGLYPEAVSIGEDVSGMPTFCIPVQDGGVGFDYRLQMAIADKWIELLKKRDEDWKMGAIVHTMTNRRWLEKCVAYAESHDQALVGDKTIAFWLMDKDMYDFMALDRPSTPRIDRGIALHKMIRLVTMGLGGEAYLNFMGNEFGHPEWIDFPRGDQRLPNGQFVPGNNFSYDKCRRRFDLGDADYLRYRGMQEFDRAMQHLEEKYGFMT*****************MTDLIPSWYMRQA*******

**Y*SG*R********************************************************************************************IESLQMEDNENVEIEDHGPVTLQGKVSSEKSEVKREVGPRSIPPPGAGQNIYEIDPNLLGHRQHLDYRYGRYKQMCEDIDKYEGGLAAFSRGYEKFGFIRSDTGITYREWAPGAKSASLIGDFNNWNPNADIMTQNEFGVWEIFLPNNADGSPPIPHGSRVKIHMDTPSGIKDSIPAWIKFSVQAPGEIPYNGIYYDPPEEEKYV********PKSLRIYEAHVGMSSTEPIINTYANFRDDVLPRIKRLGYNAVQIMAVQEHSYYASFGYHVTNFFAPSSRCGTPDDLKSLIDKAHELGLLVLMDIVHSHASNNVLDGLNMFDGTDGHYFHSGSRGYHWMWDSRLFNYGSWEVLRFLLSNARWWLEEYKFDGFRFDGVTSMMYTHHGLQVAFTGNYSEYFGFATDVDAVVYLMLVNDMIHGLYPEAVSIGEDVSGMPTFCIPVQDGGVGFDYRLQMAIADKWIELLKKRDEDWKMGAIVHTMTNRRWLEKCVAYAESHDQALVGDKTIAFWLMDKDMYDFMALDRPSTPRIDRGIALHKMIRLVTMGLGGEAYLNFMGNEFGHPEWIDFPRGDQRLPNGQFVPGNNFSYDKCRRRFDLGDADYLRYRGMQEFDRAMQHLEEKYGFMTSEHQYVSRKDQGDRGGMMTDLIPSWYMRQAERLWSML

MVYASGIRLPCVPHLYKSSAPSGFNGDRRSTSLSFLLKKDSFSRKIFAGKSSKEFDASPLIITASEKVLV*********************SEDIEVRNGIESLQMEDNENVEIEDHGPVTLQG**************PRSIPPPGAGQNIYEIDPNLLGHRQHLDYRYGRYKQMCEDIDKYEGGLAAFSRGYEKFGFIRSDTGITYREWAPGAKSASLIGDFNNWNPNADIMTQNEFGVWEIFLPNNADGSPPIPHGSRVKIHMDTPSGIKDSIPAWIKFSVQAPGEIPYNGIYYDPPEEEKYVFQHPQPKKPKSLRIYEAHVGMSSTEPIINTYANFRDDVLPRIKRLGYNAVQIMAVQEHSYYASFGYHVTNFFAPSSRCGTPDDLKSLIDKAHELGLLVLMDIVHSHASNNVLDGLNMFDGTDGHYFHSGSRGYHWMWDSRLFNYGSWEVLRFLLSNARWWLEEYKFDGFRFDGVTSMMYTHHGLQVAFTGNYSEYFGFATDVDAVVYLMLVNDMIHGLYPEAVSIGEDVSGMPTFCIPVQDGGVGFDYRLQMAIADKWIELLKKRDEDWKMGAIVHTMTNRRWLEKCVAYAESHDQALVGDKTIAFWLMDKDMYDFMALDRPSTPRIDRGIALHKMIRLVTMGLGGEAYLNFMGNEFGHPEWIDFPRGDQRLPNGQFVPGNNFSYDKCRRRFDLGDADYLRYRGMQEFDRAMQHLEEKYGFMTSEHQYVSRKDQGDRGGMMTDLIPSWYMRQAERLWSML

MVYASGIRLPCVPHLY****************LSFLLKKDSFSRKIFAGKSSKEFDASPLIITASEKVLVPGS**************PETVSEDIEVRNGIESLQMEDNENVEIEDHGPVTLQGK****KSE**REVGPRSIPPPGAGQNIYEIDPNLLGHRQHLDYRYGRYKQMCEDIDKYEGGLAAFSRGYEKFGFIRSDTGITYREWAPGAKSASLIGDFNNWNPNADIMTQNEFGVWEIFLPNNADGSPPIPHGSRVKIHMDTPSGIKDSIPAWIKFSVQAPGEIPYNGIYYDPPEEEKYVFQHPQPKKPKSLRIYEAHVGMSSTEPIINTYANFRDDVLPRIKRLGYNAVQIMAVQEHSYYASFGYHVTNFFAPSSRCGTPDDLKSLIDKAHELGLLVLMDIVHSHASNNVLDGLNMFDGTDGHYFHSGSRGYHWMWDSRLFNYGSWEVLRFLLSNARWWLEEYKFDGFRFDGVTSMMYTHHGLQVAFTGNYSEYFGFATDVDAVVYLMLVNDMIHGLYPEAVSIGEDVSGMPTFCIPVQDGGVGFDYRLQMAIADKWIELLKKRDEDWKMGAIVHTMTNRRWLEKCVAYAESHDQALVGDKTIAFWLMDKDMYDFMALDRPSTPRIDRGIALHKMIRLVTMGLGGEAYLNFMGNEFGHPEWIDFPRGDQRLPNGQFVPGNNFSYDKCRRRFDLGDADYLRYRGMQEFDRAMQHLEEKYGFMTSEHQYVSRKDQGDRGGMMTDLIPSWYMRQAERLWSML

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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		765	2.2.26 [Sep-21-2011]
Q9LZS3		805	1,4-alpha-glucan-branchin	yes	no	0.933	0.886	0.774	0.0
O23647		858	1,4-alpha-glucan-branchin	no	no	0.967	0.862	0.752	0.0
Q08047		799	1,4-alpha-glucan-branchin	N/A	no	0.908	0.869	0.743	0.0
P30924		861	1,4-alpha-glucan-branchin	N/A	no	0.758	0.673	0.599	0.0
Q01401		820	1,4-alpha-glucan-branchin	no	no	0.758	0.707	0.587	0.0
Q9D6Y9		702	1,4-alpha-glucan-branchin	yes	no	0.756	0.824	0.581	0.0
Q04446		702	1,4-alpha-glucan-branchin	yes	no	0.756	0.824	0.571	0.0
Q9Y8H3		684	1,4-alpha-glucan-branchin	yes	no	0.766	0.856	0.586	0.0
Q6EAS5		699	1,4-alpha-glucan-branchin	yes	no	0.756	0.828	0.571	0.0
Q96VA4		689	1,4-alpha-glucan-branchin	yes	no	0.768	0.853	0.570	0.0

>sp\|Q9LZS3\|GLGB2_ARATH 1,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=SBE2.2 PE=1 SV=1	Back alignment and function desciption

 Score = 1203 bits (3112), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 576/744 (77%), Positives = 632/744 (84%), Gaps = 30/744 (4%)

Query: 1   MVYASGIRLPCVPHLYKSSAP--SGFNGDRRSTSLSFLLKKDSFSRKIFAGKSSKEFDAS 58
           MV   G+ L   P     S P  +GFN    +++LSF  KK   SRKIFAGK S EFD+S
Sbjct: 1   MVVIHGVSL--TPRFTLPSRPLNTGFNAG--NSTLSFFFKKHPLSRKIFAGKQSAEFDSS 56

Query: 59  PLIITASEKVLVPGSQSDDPSAVTDQLETPETVSEDIEVRNGIESLQMEDNENVEIEDHG 118
              I+ASEKVLVP +  DDP   +   +              +ES  ME  E V  ED  
Sbjct: 57  SQAISASEKVLVPDNLDDDPRGFSQIFD--------------LESQTMEYTEAVRTEDQT 102

Query: 119 PVTLQGKVSSEKSEVKREVGPRSIPPPGAGQNIYEIDPNLLGHRQHLDYRYGRYKQMCED 178
              ++          +R V PR +PPPG G+ IYEIDP L  +  HLDYRYG+YK++ E+
Sbjct: 103 MNVVK----------ERGVKPRIVPPPGDGKKIYEIDPMLRTYNNHLDYRYGQYKRLREE 152

Query: 179 IDKYEGGLAAFSRGYEKFGFIRSDTGITYREWAPGAKSASLIGDFNNWNPNADIMTQNEF 238
           IDKYEGGL AFSRGYEK GF RSD GITYREWAPGAK+ASLIGDFNNWN NADIMT+NEF
Sbjct: 153 IDKYEGGLEAFSRGYEKLGFSRSDAGITYREWAPGAKAASLIGDFNNWNSNADIMTRNEF 212

Query: 239 GVWEIFLPNNADGSPPIPHGSRVKIHMDTPSGIKDSIPAWIKFSVQAPGEIPYNGIYYDP 298
           GVWEIFLPNN DGSP IPHGSRVKI MDTPSGIKDSIPAWIKFSVQAPGEIP+NGIYYDP
Sbjct: 213 GVWEIFLPNNTDGSPAIPHGSRVKIRMDTPSGIKDSIPAWIKFSVQAPGEIPFNGIYYDP 272

Query: 299 PEEEKYVFQHPQPKKPKSLRIYEAHVGMSSTEPIINTYANFRDDVLPRIKRLGYNAVQIM 358
           PEEEKYVF+HPQPK+PKSLRIYEAHVGMSSTEP++NTYANFRDDVLPRIK+LGYNAVQIM
Sbjct: 273 PEEEKYVFKHPQPKRPKSLRIYEAHVGMSSTEPMVNTYANFRDDVLPRIKKLGYNAVQIM 332

Query: 359 AVQEHSYYASFGYHVTNFFAPSSRCGTPDDLKSLIDKAHELGLLVLMDIVHSHASNNVLD 418
           A+QEHSYYASFGYHVTNFFAPSSRCGTP++LKSLID+AHELGL+VLMDIVHSHAS N LD
Sbjct: 333 AIQEHSYYASFGYHVTNFFAPSSRCGTPEELKSLIDRAHELGLVVLMDIVHSHASKNTLD 392

Query: 419 GLNMFDGTDGHYFHSGSRGYHWMWDSRLFNYGSWEVLRFLLSNARWWLEEYKFDGFRFDG 478
           GLNMFDGTD HYFHSG RGYHWMWDSRLFNYGSWEVLR+LLSNARWWLEEYKFDGFRFDG
Sbjct: 393 GLNMFDGTDAHYFHSGPRGYHWMWDSRLFNYGSWEVLRYLLSNARWWLEEYKFDGFRFDG 452

Query: 479 VTSMMYTHHGLQVAFTGNYSEYFGFATDVDAVVYLMLVNDMIHGLYPEAVSIGEDVSGMP 538
           VTSMMYTHHGL V FTGNY+EYFG  TDVDAV YLMLVNDMIHGLYPEA+++GEDVSGMP
Sbjct: 453 VTSMMYTHHGLSVGFTGNYTEYFGLETDVDAVNYLMLVNDMIHGLYPEAITVGEDVSGMP 512

Query: 539 TFCIPVQDGGVGFDYRLQMAIADKWIELLKKRDEDWKMGAIVHTMTNRRWLEKCVAYAES 598
           TFCIPVQDGGVGFDYRL MAIADKWIE+LKKRDEDW+MG I++T+TNRRW EKC++YAES
Sbjct: 513 TFCIPVQDGGVGFDYRLHMAIADKWIEMLKKRDEDWQMGDIIYTLTNRRWSEKCISYAES 572

Query: 599 HDQALVGDKTIAFWLMDKDMYDFMALDRPSTPRIDRGIALHKMIRLVTMGLGGEAYLNFM 658
           HDQALVGDKTIAFWLMDKDMYDFMA+DRPSTP IDRGIALHKMIRL+TMGLGGE YLNFM
Sbjct: 573 HDQALVGDKTIAFWLMDKDMYDFMAVDRPSTPLIDRGIALHKMIRLITMGLGGEGYLNFM 632

Query: 659 GNEFGHPEWIDFPRGDQRLPNGQFVPGNNFSYDKCRRRFDLGDADYLRYRGMQEFDRAMQ 718
           GNEFGHPEWIDFPRG+QRL +G  +PGNNFSYDKCRRRFDLGDADYLRYRG+QEFD+AMQ
Sbjct: 633 GNEFGHPEWIDFPRGEQRLSDGSVIPGNNFSYDKCRRRFDLGDADYLRYRGLQEFDQAMQ 692

Query: 719 HLEEKYGFMTSEHQYVSRKDQGDR 742
           HLEE YGFMTSEHQ++SRKD+ DR
Sbjct: 693 HLEENYGFMTSEHQFISRKDEADR 716

Catalyzes the formation of the alpha-1,6-glucosidic linkages in starch by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 8

>sp\|O23647\|GLGB1_ARATH 1,4-alpha-glucan-branching enzyme 2-1, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=SBE2.1 PE=1 SV=1	Back alignment and function description

>sp\|Q08047\|GLGB_MAIZE 1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic OS=Zea mays GN=SBE1 PE=1 SV=1	Back alignment and function description

>sp\|P30924\|GLGB_SOLTU 1,4-alpha-glucan-branching enzyme OS=Solanum tuberosum GN=SBE1 PE=2 SV=2	Back alignment and function description

>sp\|Q01401\|GLGB_ORYSJ 1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SBE1 PE=1 SV=2	Back alignment and function description

>sp\|Q9D6Y9\|GLGB_MOUSE 1,4-alpha-glucan-branching enzyme OS=Mus musculus GN=Gbe1 PE=2 SV=1	Back alignment and function description

>sp\|Q04446\|GLGB_HUMAN 1,4-alpha-glucan-branching enzyme OS=Homo sapiens GN=GBE1 PE=1 SV=3	Back alignment and function description

>sp\|Q9Y8H3\|GLGB_EMENI 1,4-alpha-glucan-branching enzyme OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=be1 PE=2 SV=3	Back alignment and function description

>sp\|Q6EAS5\|GLGB_HORSE 1,4-alpha-glucan-branching enzyme OS=Equus caballus GN=GBE1 PE=2 SV=1	Back alignment and function description

>sp\|Q96VA4\|GLGB_ASPOR 1,4-alpha-glucan-branching enzyme OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=gbeA PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		765
50400194		856	starch branching enzyme II [Vigna radiat	0.959	0.857	0.793	0.0
449440211		876	PREDICTED: 1,4-alpha-glucan-branching en	0.967	0.844	0.802	0.0
297740079		859	unnamed protein product [Vitis vinifera]	0.963	0.857	0.794	0.0
356572528		868	PREDICTED: 1,4-alpha-glucan-branching en	0.959	0.845	0.776	0.0
129770485		845	starch branching enzyme II-1 [Malus x do	0.955	0.865	0.792	0.0
255587042		863	starch branching enzyme II, putative [Ri	0.962	0.852	0.797	0.0
359481985		1035	PREDICTED: 1,4-alpha-glucan-branching en	0.922	0.682	0.806	0.0
124303224		833	starch branching enzyme II [Populus tric	0.939	0.863	0.780	0.0
42794062		870	starch branching enzyme [Phaseolus vulga	0.959	0.843	0.772	0.0
1345570		922	starch branching enzyme I [Pisum sativum	0.959	0.796	0.761	0.0

>gi\|50400194\|gb\|AAT76444.1\| starch branching enzyme II [Vigna radiata]	Back alignment and taxonomy information

 Score = 1239 bits (3205), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 596/751 (79%), Positives = 661/751 (88%), Gaps = 17/751 (2%)

Query: 1   MVYA-SGIRLPCVPHLYKSSAPSGFNGDRRSTSLSFLLKKDSFSRKIFAGKSSKEFDASP 59
           MVY  SGIR P VP L  SS      GDRR+ SL   L+K+ FSRKI A KSS + D+  
Sbjct: 1   MVYTISGIRFPVVPSLNVSS----LRGDRRAASLPVFLRKNDFSRKILAVKSSHDSDSPS 56

Query: 60  LIITASEKVLVPGSQSDDPSAVTDQLETPETVSEDIEVRNGIESLQMEDNENVEIE--DH 117
             I  S+KVL+P  Q D+ +++TDQLETP   SED    + +E L MED +   I   D 
Sbjct: 57  SAIAESDKVLIPQDQ-DNSASLTDQLETPVITSEDA---HNLEDLTMEDEDKYSISEADT 112

Query: 118 GPVTLQGKVSSEKSEVKR------EVGPRSIPPPGAGQNIYEIDPNLLGHRQHLDYRYGR 171
               ++G++ S  S  K+      E  P++IP PGAGQ IYEIDP+LL HR+HLD+R+G+
Sbjct: 113 SYRQIEGELGSVVSVGKKVNIPSDEAKPKTIPRPGAGQKIYEIDPSLLAHREHLDFRFGQ 172

Query: 172 YKQMCEDIDKYEGGLAAFSRGYEKFGFIRSDTGITYREWAPGAKSASLIGDFNNWNPNAD 231
           YK++ ++I+KYEGGL  FSRGYEKFGFIRS TG+TYREWAPGAKSA+LIGDFNNWN NAD
Sbjct: 173 YKRLHDEINKYEGGLDTFSRGYEKFGFIRSATGVTYREWAPGAKSAALIGDFNNWNSNAD 232

Query: 232 IMTQNEFGVWEIFLPNNADGSPPIPHGSRVKIHMDTPSGIKDSIPAWIKFSVQAPGEIPY 291
           +MT+NEFGVWEIFLPNN DGSPPIPHGSRVKI MDTPSG+KDSIPAWIKFSVQAPGEIPY
Sbjct: 233 VMTRNEFGVWEIFLPNNVDGSPPIPHGSRVKIRMDTPSGVKDSIPAWIKFSVQAPGEIPY 292

Query: 292 NGIYYDPPEEEKYVFQHPQPKKPKSLRIYEAHVGMSSTEPIINTYANFRDDVLPRIKRLG 351
           +GIYYDPPEEEKYVF+HPQPK+PKSLRIYE+HVGMSS EP+INTYANFRDDVLPRIK+LG
Sbjct: 293 SGIYYDPPEEEKYVFKHPQPKRPKSLRIYESHVGMSSPEPMINTYANFRDDVLPRIKKLG 352

Query: 352 YNAVQIMAVQEHSYYASFGYHVTNFFAPSSRCGTPDDLKSLIDKAHELGLLVLMDIVHSH 411
           YNAVQIMA+QEHSYYASFGYHVTNFFAPSSR GTP++LKSLIDKAHELGLLVLMDIVHSH
Sbjct: 353 YNAVQIMAIQEHSYYASFGYHVTNFFAPSSRFGTPEELKSLIDKAHELGLLVLMDIVHSH 412

Query: 412 ASNNVLDGLNMFDGTDGHYFHSGSRGYHWMWDSRLFNYGSWEVLRFLLSNARWWLEEYKF 471
           ASNN LDGLNMFDGTD HYFH GSRGYHWMWDSRLFNYGSWEVLR+LLSNARWWL+EYKF
Sbjct: 413 ASNNTLDGLNMFDGTDSHYFHPGSRGYHWMWDSRLFNYGSWEVLRYLLSNARWWLDEYKF 472

Query: 472 DGFRFDGVTSMMYTHHGLQVAFTGNYSEYFGFATDVDAVVYLMLVNDMIHGLYPEAVSIG 531
           DGFRFDGVTSMMYTHHGLQVAFTGNYSEYFG ATDVDAVVYLML ND+IHGL+PEAV+IG
Sbjct: 473 DGFRFDGVTSMMYTHHGLQVAFTGNYSEYFGMATDVDAVVYLMLANDLIHGLFPEAVTIG 532

Query: 532 EDVSGMPTFCIPVQDGGVGFDYRLQMAIADKWIELLKKRDEDWKMGAIVHTMTNRRWLEK 591
           EDVSGMPTFC+P QDGGVGFDYRLQMAIADKWIE+LKK+DEDWKMG IVHT+TNRRWLEK
Sbjct: 533 EDVSGMPTFCLPTQDGGVGFDYRLQMAIADKWIEILKKQDEDWKMGDIVHTLTNRRWLEK 592

Query: 592 CVAYAESHDQALVGDKTIAFWLMDKDMYDFMALDRPSTPRIDRGIALHKMIRLVTMGLGG 651
           CVAYAESHDQALVGDKTIAFWLMDKDMYDFMALDRPSTPRIDRGIALHKMIRL+TMGLGG
Sbjct: 593 CVAYAESHDQALVGDKTIAFWLMDKDMYDFMALDRPSTPRIDRGIALHKMIRLITMGLGG 652

Query: 652 EAYLNFMGNEFGHPEWIDFPRGDQRLPNGQFVPGNNFSYDKCRRRFDLGDADYLRYRGMQ 711
           E YLNFMGNEFGHPEWIDFPRG+Q+LPNG  +PGNN+SYDKCRRRFDLGDADYLRYRGMQ
Sbjct: 653 EGYLNFMGNEFGHPEWIDFPRGEQQLPNGSVIPGNNYSYDKCRRRFDLGDADYLRYRGMQ 712

Query: 712 EFDRAMQHLEEKYGFMTSEHQYVSRKDQGDR 742
           EFDRAMQ LEEK+GFMT+EHQY+SRK++GD+
Sbjct: 713 EFDRAMQLLEEKFGFMTAEHQYISRKNEGDK 743

Source: Vigna radiata

Species: Vigna radiata

Genus: Vigna

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|449440211\|ref\|XP_004137878.1\| PREDICTED: 1,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|297740079\|emb\|CBI30261.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356572528\|ref\|XP_003554420.1\| PREDICTED: 1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic-like [Glycine max]	Back alignment and taxonomy information

>gi\|129770485\|gb\|ABO31358.1\| starch branching enzyme II-1 [Malus x domestica]	Back alignment and taxonomy information

>gi\|255587042\|ref\|XP_002534111.1\| starch branching enzyme II, putative [Ricinus communis] gi\|223525834\|gb\|EEF28271.1\| starch branching enzyme II, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|359481985\|ref\|XP_002277213.2\| PREDICTED: 1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|124303224\|gb\|ABN05322.1\| starch branching enzyme II [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|42794062\|dbj\|BAA82348.2\| starch branching enzyme [Phaseolus vulgaris]	Back alignment and taxonomy information

>gi\|1345570\|emb\|CAA56319.1\| starch branching enzyme I [Pisum sativum]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		765
TAIR\|locus:2044903		858	SBE2.1 "starch branching enzym	0.967	0.862	0.741	6.89999976374e-317
TAIR\|locus:2144608		805	SBE2.2 "starch branching enzym	0.894	0.849	0.789	2.8e-311
UNIPROTKB\|Q01401		820	SBE1 "1,4-alpha-glucan-branchi	0.756	0.706	0.59	3.9e-195
MGI\|MGI:1921435		702	Gbe1 "glucan (1,4-alpha-), bra	0.756	0.824	0.581	1.8e-190
UNIPROTKB\|Q04446		702	GBE1 "1,4-alpha-glucan-branchi	0.756	0.824	0.571	6e-190
ASPGD\|ASPL0000046871		684	AN2314 [Emericella nidulans (t	0.766	0.856	0.586	2e-189
UNIPROTKB\|F1PX32		699	GBE1 "Uncharacterized protein"	0.756	0.828	0.574	1.1e-188
UNIPROTKB\|E9PGM4		661	GBE1 "1,4-alpha-glucan-branchi	0.734	0.850	0.579	3.8e-188
ZFIN\|ZDB-GENE-110914-16		630	si:ch211-247m23.1 "si:ch211-24	0.759	0.922	0.554	1.9e-186
UNIPROTKB\|G4NAD9		691	MGG_03186 "1,4-alpha-glucan-br	0.754	0.835	0.562	1.6e-182

TAIR\|locus:2044903 SBE2.1 "starch branching enzyme 2.1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 3039 (1074.8 bits), Expect = 6.9e-317, P = 6.9e-317
 Identities = 558/753 (74%), Positives = 634/753 (84%)

Query:     1 MVYA-SGIRLPCVPHLYK-SSAPSGFNGDRRXXXXXXXXXXXXXXXX--IFAGKSSKEFD 56
             MVY  SG+R P +P + K +S+   FN D R                  +FA K S + D
Sbjct:     1 MVYTISGVRFPHLPSIKKKNSSLHSFNEDLRRSNAVSFSLRKDSRSSGKVFARKPSYDSD 60

Query:    57 ASPLIITASEKVLVPGSQSDDPSAVTDQLETPETVSEDIEVRNGIESLQMEDNENVEIED 116
             +S L  TASEK+   G QSD  S+ +DQ+++ +TVS+D +V   ++  + E+ +  E  D
Sbjct:    61 SSSLATTASEKLR--GHQSDSSSSASDQVQSRDTVSDDTQVLGNVDVQKTEEAQETETLD 118

Query:   117 H-GPVTLQGKVSSEKS------EVKREVGPRSIPPPGAGQNIYEIDPNLLGHRQHLDYRY 169
                 ++  G +S ++        V +EVG R IPPPG G+ IY+IDP L  HR HLDYRY
Sbjct:   119 QTSALSTSGSISYKEDFAKMSHSVDQEVGQRKIPPPGDGKRIYDIDPMLNSHRNHLDYRY 178

Query:   170 GRYKQMCEDIDKYEGGLAAFSRGYEKFGFIRSDTGITYREWAPGAKSASLIGDFNNWNPN 229
             G+Y+++ E+IDK EGGL AFSRGYE FGF RS TGITYREWAPGAK+ASLIGDFNNWN  
Sbjct:   179 GQYRKLREEIDKNEGGLEAFSRGYEIFGFTRSATGITYREWAPGAKAASLIGDFNNWNAK 238

Query:   230 ADIMTQNEFGVWEIFLPNNADGSPPIPHGSRVKIHMDTPSGIKDSIPAWIKFSVQAPGEI 289
             +D+M +N+FGVWEIFLPNNADGSP IPHGSRVKI MDTPSGIKDSIPAWIK+SVQ PGEI
Sbjct:   239 SDVMARNDFGVWEIFLPNNADGSPAIPHGSRVKIRMDTPSGIKDSIPAWIKYSVQPPGEI 298

Query:   290 PYNGIYYDPPEEEKYVFQHPQPKKPKSLRIYEAHVGMSSTEPIINTYANFRDDVLPRIKR 349
             PYNG+YYDPPEE+KY F+HP+PKKP SLRIYE+HVGMSSTEP INTYANFRDDVLPRIK+
Sbjct:   299 PYNGVYYDPPEEDKYAFKHPRPKKPTSLRIYESHVGMSSTEPKINTYANFRDDVLPRIKK 358

Query:   350 LGYNAVQIMAVQEHSYYASFGYHVTNFFAPSSRCGTPDDLKSLIDKAHELGLLVLMDIVH 409
             LGYNAVQIMA+QEH+YYASFGYHVTNFFAPSSR GTPDDLKSLIDKAHELGL+VLMDIVH
Sbjct:   359 LGYNAVQIMAIQEHAYYASFGYHVTNFFAPSSRFGTPDDLKSLIDKAHELGLVVLMDIVH 418

Query:   410 SHASNNVLDGLNMFDGTDGHYFHSGSRGYHWMWDSRLFNYGSWEVLRFLLSNARWWLEEY 469
             SHAS N LDGL+MFDGTDG YFHSGSRGYHWMWDSRLFNYGSWEVLR+LLSNARWWLEEY
Sbjct:   419 SHASKNTLDGLDMFDGTDGQYFHSGSRGYHWMWDSRLFNYGSWEVLRYLLSNARWWLEEY 478

Query:   470 KFDGFRFDGVTSMMYTHHGLQVAFTGNYSEYFGFATDVDAVVYLMLVNDMIHGLYPEAVS 529
             KFDGFRFDGVTSMMYTHHGLQV FTGNY+EYFG++TDVDAVVYLMLVND+IHGLYPEA+ 
Sbjct:   479 KFDGFRFDGVTSMMYTHHGLQVEFTGNYNEYFGYSTDVDAVVYLMLVNDLIHGLYPEAIV 538

Query:   530 IGEDVSGMPTFCIPVQDGGVGFDYRLQMAIADKWIELLKKRDEDWKMGAIVHTMTNRRWL 589
             +GEDVSGMP FC+PV+DGGVGFDYRL MA+ADKWIELLKKRDEDW++G I  T+TNRRW 
Sbjct:   539 VGEDVSGMPAFCVPVEDGGVGFDYRLHMAVADKWIELLKKRDEDWQVGDITFTLTNRRWG 598

Query:   590 EKCVAYAESHDQALVGDKTIAFWLMDKDMYDFMALDRPSTPRIDRGIALHKMIRLVTMGL 649
             EKCV YAESHDQALVGDKTIAFWLMDKDMYDFMA+DR +TPR+DRGIALHKMIRL+TMGL
Sbjct:   599 EKCVVYAESHDQALVGDKTIAFWLMDKDMYDFMAVDRQATPRVDRGIALHKMIRLITMGL 658

Query:   650 GGEAYLNFMGNEFGHPEWIDFPRGDQRLPNGQFVPGNNFSYDKCRRRFDLGDADYLRYRG 709
             GGE YLNFMGNEFGHPEWIDFPR DQ LP+G+ + GNN SYDKCRRRFDLGDA+YLRY G
Sbjct:   659 GGEGYLNFMGNEFGHPEWIDFPRTDQHLPDGRVIAGNNGSYDKCRRRFDLGDAEYLRYHG 718

Query:   710 MQEFDRAMQHLEEKYGFMTSEHQYVSRKDQGDR 742
             +QEFDRAMQ+LEE YGFMTSEHQY+SRKD+GDR
Sbjct:   719 LQEFDRAMQNLEETYGFMTSEHQYISRKDEGDR 751

GO:0003824 "catalytic activity" evidence=IEA

GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0043169 "cation binding" evidence=IEA

GO:0003844 "1,4-alpha-glucan branching enzyme activity" evidence=ISS;IDA

GO:0005982 "starch metabolic process" evidence=RCA;IMP

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0000272 "polysaccharide catabolic process" evidence=RCA

GO:0009664 "plant-type cell wall organization" evidence=RCA

GO:0019252 "starch biosynthetic process" evidence=RCA

GO:0010021 "amylopectin biosynthetic process" evidence=TAS

TAIR\|locus:2144608 SBE2.2 "starch branching enzyme 2.2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

UNIPROTKB\|Q01401 SBE1 "1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic" [Oryza sativa Japonica Group (taxid:39947)]	Back alignment and assigned GO terms

MGI\|MGI:1921435 Gbe1 "glucan (1,4-alpha-), branching enzyme 1" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

UNIPROTKB\|Q04446 GBE1 "1,4-alpha-glucan-branching enzyme" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

ASPGD\|ASPL0000046871 AN2314 [Emericella nidulans (taxid:162425)]	Back alignment and assigned GO terms

UNIPROTKB\|F1PX32 GBE1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

UNIPROTKB\|E9PGM4 GBE1 "1,4-alpha-glucan-branching enzyme" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-110914-16 si:ch211-247m23.1 "si:ch211-247m23.1" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

UNIPROTKB\|G4NAD9 MGG_03186 "1,4-alpha-glucan-branching enzyme" [Magnaporthe oryzae 70-15 (taxid:242507)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q04446	GLGB_HUMAN	2, ., 4, ., 1, ., 1, 8	0.5714	0.7568	0.8247	yes	no
Q555Q9	GLGB_DICDI	2, ., 4, ., 1, ., 1, 8	0.5494	0.7581	0.8554	yes	no
Q96VA4	GLGB_ASPOR	2, ., 4, ., 1, ., 1, 8	0.5709	0.7686	0.8534	yes	no
Q6CCT1	GLGB_YARLI	2, ., 4, ., 1, ., 1, 8	0.5557	0.7176	0.7945	yes	no
Q6EAS5	GLGB_HORSE	2, ., 4, ., 1, ., 1, 8	0.5714	0.7568	0.8283	yes	no
Q6FJV0	GLGB_CANGA	2, ., 4, ., 1, ., 1, 8	0.5279	0.7633	0.8271	yes	no
Q08047	GLGB_MAIZE	2, ., 4, ., 1, ., 1, 8	0.7439	0.9084	0.8698	N/A	no
Q9D6Y9	GLGB_MOUSE	2, ., 4, ., 1, ., 1, 8	0.5815	0.7568	0.8247	yes	no
O23647	GLGB1_ARATH	2, ., 4, ., 1, ., 1, 8	0.7529	0.9673	0.8624	no	no
P0CN82	GLGB_CRYNJ	2, ., 4, ., 1, ., 1, 8	0.5816	0.7633	0.8563	yes	no
Q6CX53	GLGB_KLULA	2, ., 4, ., 1, ., 1, 8	0.5079	0.7620	0.8108	yes	no
Q757Q6	GLGB_ASHGO	2, ., 4, ., 1, ., 1, 8	0.512	0.7633	0.8307	yes	no
Q9Y8H3	GLGB_EMENI	2, ., 4, ., 1, ., 1, 8	0.5863	0.7660	0.8567	yes	no
P32775	GLGB_YEAST	2, ., 4, ., 1, ., 1, 8	0.5370	0.7124	0.7741	yes	no
Q6BXN1	GLGB_DEBHA	2, ., 4, ., 1, ., 1, 8	0.5140	0.7568	0.8143	yes	no
Q9LZS3	GLGB2_ARATH	2, ., 4, ., 1, ., 1, 8	0.7741	0.9333	0.8869	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.4.1.18	0.991
3rd Layer	2.4.1	0.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00021658001	SubName- Full=Chromosome chr8 scaffold_23, whole genome shotgun sequence; (859 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00019399001	SubName- Full=Chromosome chr7 scaffold_20, whole genome shotgun sequence; (585 aa)	•	•		•		0.659
	GSVIVG00017037001	SubName- Full=Chromosome chr11 scaffold_14, whole genome shotgun sequence; (501 aa)	•			•		0.557
	GSVIVG00037251001	SubName- Full=Chromosome chr16 scaffold_86, whole genome shotgun sequence; (552 aa)	•	•		•		0.540
	GSVIVG00015177001	SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (583 aa)	•	•		•	•	0.487
	GSVIVG00034877001	SubName- Full=Chromosome chr4 scaffold_73, whole genome shotgun sequence; (465 aa)		•		•		0.471
	GSVIVG00003051001	RecName- Full=Phosphorylase; EC=2.4.1.1;; Phosphorylase is an important allosteric enzyme in ca [...] (814 aa)	•	•		•		0.468
	GSVIVG00030064001	RecName- Full=Phosphorylase; EC=2.4.1.1;; Phosphorylase is an important allosteric enzyme in ca [...] (778 aa)	•	•		•		0.467
	GSVIVG00020983001	SubName- Full=Chromosome chr14 scaffold_21, whole genome shotgun sequence; (507 aa)	•	•	•	•		0.464
	GSVIVG00021049001	RecName- Full=Phosphorylase; EC=2.4.1.1;; Phosphorylase is an important allosteric enzyme in ca [...] (760 aa)	•	•		•		0.453
	GSVIVG00024166001	RecName- Full=Phosphorylase; EC=2.4.1.1;; Phosphorylase is an important allosteric enzyme in ca [...] (842 aa)	•	•		•		0.452

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		765
PLN02447		758	PLN02447, PLN02447, 1,4-alpha-glucan-branching enz	0.0
cd11321		406	cd11321, AmyAc_bac_euk_BE, Alpha amylase catalytic	0.0
PLN02960		897	PLN02960, PLN02960, alpha-amylase	1e-165
PLN03244		872	PLN03244, PLN03244, alpha-amylase; Provisional	1e-118
COG0296		628	COG0296, GlgB, 1,4-alpha-glucan branching enzyme [	1e-100
PRK12313		633	PRK12313, PRK12313, glycogen branching enzyme; Pro	1e-68
cd11322		402	cd11322, AmyAc_Glg_BE, Alpha amylase catalytic dom	1e-55
TIGR01515		618	TIGR01515, branching_enzym, alpha-1,4-glucan:alpha	3e-55
PRK05402		726	PRK05402, PRK05402, glycogen branching enzyme; Pro	2e-54
PRK14706		639	PRK14706, PRK14706, glycogen branching enzyme; Pro	1e-45
cd02854		95	cd02854, E_set_GBE_euk_N, N-terminal Early set dom	1e-43
PRK12568		730	PRK12568, PRK12568, glycogen branching enzyme; Pro	3e-43
PRK14705		1224	PRK14705, PRK14705, glycogen branching enzyme; Pro	9e-42
cd11325		436	cd11325, AmyAc_GTHase, Alpha amylase catalytic dom	7e-32
TIGR02402		544	TIGR02402, trehalose_TreZ, malto-oligosyltrehalose	1e-27
cd11350		390	cd11350, AmyAc_4, Alpha amylase catalytic domain f	3e-26
COG1523		697	COG1523, PulA, Type II secretory pathway, pullulan	9e-20
cd00551		260	cd00551, AmyAc_family, Alpha amylase catalytic dom	7e-17
pfam02922		83	pfam02922, CBM_48, Carbohydrate-binding module 48	2e-16
cd11313		336	cd11313, AmyAc_arch_bac_AmyA, Alpha amylase cataly	2e-16
TIGR02104		605	TIGR02104, pulA_typeI, pullulanase, type I	1e-15
cd11326		433	cd11326, AmyAc_Glg_debranch, Alpha amylase catalyt	6e-14
TIGR02100		688	TIGR02100, glgX_debranch, glycogen debranching enz	9e-14
cd02855		105	cd02855, E_set_GBE_prok_N, N-terminal Early set do	2e-13
smart00642		166	smart00642, Aamy, Alpha-amylase domain	7e-13
TIGR02102		1111	TIGR02102, pullulan_Gpos, pullulanase, extracellul	5e-12
cd11316		403	cd11316, AmyAc_bac2_AmyA, Alpha amylase catalytic	2e-11
cd11330		472	cd11330, AmyAc_OligoGlu, Alpha amylase catalytic d	2e-11
pfam00128		314	pfam00128, Alpha-amylase, Alpha amylase, catalytic	2e-11
COG0366		505	COG0366, AmyA, Glycosidases [Carbohydrate transpor	1e-10
cd11340		407	cd11340, AmyAc_bac_CMD_like_3, Alpha amylase catal	2e-10
cd11338		389	cd11338, AmyAc_CMD, Alpha amylase catalytic domain	6e-10
PRK03705		658	PRK03705, PRK03705, glycogen debranching enzyme; P	1e-09
cd11341		406	cd11341, AmyAc_Pullulanase_LD-like, Alpha amylase	2e-09
cd11319		375	cd11319, AmyAc_euk_AmyA, Alpha amylase catalytic d	3e-09
cd11339		344	cd11339, AmyAc_bac_CMD_like_2, Alpha amylase catal	9e-09
cd11320		389	cd11320, AmyAc_AmyMalt_CGTase_like, Alpha amylase	1e-08
cd11314		302	cd11314, AmyAc_arch_bac_plant_AmyA, Alpha amylase	3e-08
cd11348		429	cd11348, AmyAc_2, Alpha amylase catalytic domain f	5e-08
cd11337		328	cd11337, AmyAc_CMD_like, Alpha amylase catalytic d	5e-08
cd11352		443	cd11352, AmyAc_5, Alpha amylase catalytic domain f	1e-07
PLN02960		897	PLN02960, PLN02960, alpha-amylase	2e-07
cd11353		366	cd11353, AmyAc_euk_bac_CMD_like, Alpha amylase cat	2e-07
cd11346		347	cd11346, AmyAc_plant_IsoA, Alpha amylase catalytic	3e-07
cd02688		82	cd02688, E_set, Early set domain associated with t	1e-06
cd11328		470	cd11328, AmyAc_maltase, Alpha amylase catalytic do	1e-06
cd11332		481	cd11332, AmyAc_OligoGlu_TS, Alpha amylase catalyti	2e-06
PLN03244		872	PLN03244, PLN03244, alpha-amylase; Provisional	4e-06
cd11315		352	cd11315, AmyAc_bac1_AmyA, Alpha amylase catalytic	1e-05
cd11327		478	cd11327, AmyAc_Glg_debranch_2, Alpha amylase catal	2e-05
PRK14510		1221	PRK14510, PRK14510, putative bifunctional 4-alpha-	2e-05
cd11331		450	cd11331, AmyAc_OligoGlu_like, Alpha amylase cataly	2e-05
cd11334		447	cd11334, AmyAc_TreS, Alpha amylase catalytic domai	3e-05
cd07184		86	cd07184, E_set_Isoamylase_like_N, N-terminal Early	4e-05
cd11333		428	cd11333, AmyAc_SI_OligoGlu_DGase, Alpha amylase ca	5e-05
cd11354		357	cd11354, AmyAc_bac_CMD_like, Alpha amylase catalyt	7e-05
TIGR02456		539	TIGR02456, treS_nterm, trehalose synthase	8e-05
PRK09505		683	PRK09505, malS, alpha-amylase; Reviewed	1e-04
PRK09441		479	PRK09441, PRK09441, cytoplasmic alpha-amylase; Rev	6e-04
TIGR02403		543	TIGR02403, trehalose_treC, alpha,alpha-phosphotreh	0.002
cd02860		97	cd02860, E_set_Pullulanase, Early set domain assoc	0.002
PRK10933		551	PRK10933, PRK10933, trehalose-6-phosphate hydrolas	0.002

>gnl\|CDD\|215246 PLN02447, PLN02447, 1,4-alpha-glucan-branching enzyme	Back alignment and domain information

 Score = 1259 bits (3261), Expect = 0.0
 Identities = 479/684 (70%), Positives = 535/684 (78%), Gaps = 43/684 (6%)

Query: 63  TASEKVLVPGSQSDDPSAVTDQLETPETVSEDIEVRNGIESLQMEDNENVEIEDHGPVTL 122
             SE VL P    D   + +  ++ P                + EDN             
Sbjct: 1   ALSEHVLSPDGLPDSAPSPSPAVDEPRPEDPGSPATEAPYPAKTEDN------------- 47

Query: 123 QGKVSSEKSEVKREVGPRSIPPPGAGQNIYEIDPNLLGHRQHLDYRYGRYKQMCEDIDKY 182
                             S PPPG G  IYEIDP L  +  HL YRY RY++  E+I+K 
Sbjct: 48  --------------SAAASPPPPGDGLGIYEIDPMLEPYEDHLRYRYSRYRRRREEIEKN 93

Query: 183 EGGLAAFSRGYEKFGFIRSDTGITYREWAPGAKSASLIGDFNNWNPNADIMTQNEFGVWE 242
           EGGL AFSRGYEKFGF RS+ GITYREWAPGAK+A+LIGDFNNWNPNA  MT+NEFGVWE
Sbjct: 94  EGGLEAFSRGYEKFGFNRSEGGITYREWAPGAKAAALIGDFNNWNPNAHWMTKNEFGVWE 153

Query: 243 IFLPNNADGSPPIPHGSRVKIHMDTPSG-IKDSIPAWIKFSVQAPGEI--PYNGIYYDPP 299
           IFLP+ ADGSP IPHGSRVKI M+TP G   D IPAWIK++VQAPGEI  PYNG+Y+DPP
Sbjct: 154 IFLPD-ADGSPAIPHGSRVKIRMETPDGRWVDRIPAWIKYAVQAPGEIGAPYNGVYWDPP 212

Query: 300 EEEKYVFQHPQPKKPKSLRIYEAHVGMSSTEPIINTYANFRDDVLPRIKRLGYNAVQIMA 359
           EEEKYVF+HP+P +P +LRIYEAHVGMSS EP +N+Y  F DDVLPRIK LGYNAVQ+MA
Sbjct: 213 EEEKYVFKHPRPPRPAALRIYEAHVGMSSEEPKVNSYREFADDVLPRIKALGYNAVQLMA 272

Query: 360 VQEHSYYASFGYHVTNFFAPSSRCGTPDDLKSLIDKAHELGLLVLMDIVHSHASNNVLDG 419
           +QEH+YY SFGYHVTNFFA SSR GTP+DLK LIDKAH LGL VLMD+VHSHAS N LDG
Sbjct: 273 IQEHAYYGSFGYHVTNFFAVSSRSGTPEDLKYLIDKAHSLGLRVLMDVVHSHASKNTLDG 332

Query: 420 LNMFDGTDGHYFHSGSRGYHWMWDSRLFNYGSWEVLRFLLSNARWWLEEYKFDGFRFDGV 479
           LN FDGTDG YFHSG RGYHW+WDSRLFNYG+WEVLRFLLSN RWWLEEYKFDGFRFDGV
Sbjct: 333 LNGFDGTDGSYFHSGPRGYHWLWDSRLFNYGNWEVLRFLLSNLRWWLEEYKFDGFRFDGV 392

Query: 480 TSMMYTHHGLQVAFTGNYSEYFGFATDVDAVVYLMLVNDMIHGLYPEAVSIGEDVSGMPT 539
           TSM+Y HHGLQ+AFTGNY+EYFG ATDVDAVVYLML ND++HGLYPEAV+I EDVSGMPT
Sbjct: 393 TSMLYHHHGLQMAFTGNYNEYFGMATDVDAVVYLMLANDLLHGLYPEAVTIAEDVSGMPT 452

Query: 540 FCIPVQDGGVGFDYRLQMAIADKWIELLK-KRDEDWKMGAIVHTMTNRRWLEKCVAYAES 598
            C PVQ+GGVGFDYRL MAI DKWIELLK KRDEDW MG IVHT+TNRR+ EKCVAYAES
Sbjct: 453 LCRPVQEGGVGFDYRLAMAIPDKWIELLKEKRDEDWSMGDIVHTLTNRRYTEKCVAYAES 512

Query: 599 HDQALVGDKTIAFWLMDKDMYDFMALDRPSTPRIDRGIALHKMIRLVTMGLGGEAYLNFM 658
           HDQALVGDKTIAFWLMDK+MYD M+   P+TP +DRGIALHKMIRL+TM LGGE YLNFM
Sbjct: 513 HDQALVGDKTIAFWLMDKEMYDGMSTLTPATPVVDRGIALHKMIRLITMALGGEGYLNFM 572

Query: 659 GNEFGHPEWIDFPRGDQRLPNGQFVPGNNFSYDKCRRRFDLGDADYLRYRGMQEFDRAMQ 718
           GNEFGHPEWIDFPR            GN +SYDKCRRR+DL DAD+LRY+ +  FDRAM 
Sbjct: 573 GNEFGHPEWIDFPRE-----------GNGWSYDKCRRRWDLADADHLRYKFLNAFDRAMM 621

Query: 719 HLEEKYGFMTSEHQYVSRKDQGDR 742
           HL+EKYGF+TSEHQYVSRKD+GD+
Sbjct: 622 HLDEKYGFLTSEHQYVSRKDEGDK 645

Length = 758

>gnl\|CDD\|200460 cd11321, AmyAc_bac_euk_BE, Alpha amylase catalytic domain found in bacterial and eukaryotic branching enzymes	Back alignment and domain information

>gnl\|CDD\|215519 PLN02960, PLN02960, alpha-amylase	Back alignment and domain information

>gnl\|CDD\|178782 PLN03244, PLN03244, alpha-amylase; Provisional	Back alignment and domain information

>gnl\|CDD\|223373 COG0296, GlgB, 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|237052 PRK12313, PRK12313, glycogen branching enzyme; Provisional	Back alignment and domain information

>gnl\|CDD\|200461 cd11322, AmyAc_Glg_BE, Alpha amylase catalytic domain found in the Glycogen branching enzyme (also called 1,4-alpha-glucan branching enzyme)	Back alignment and domain information

>gnl\|CDD\|188150 TIGR01515, branching_enzym, alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase	Back alignment and domain information

>gnl\|CDD\|235445 PRK05402, PRK05402, glycogen branching enzyme; Provisional	Back alignment and domain information

>gnl\|CDD\|237795 PRK14706, PRK14706, glycogen branching enzyme; Provisional	Back alignment and domain information

>gnl\|CDD\|199884 cd02854, E_set_GBE_euk_N, N-terminal Early set domain associated with the catalytic domain of eukaryotic glycogen branching enzyme (also called 1,4 alpha glucan branching enzyme)	Back alignment and domain information

>gnl\|CDD\|139075 PRK12568, PRK12568, glycogen branching enzyme; Provisional	Back alignment and domain information

>gnl\|CDD\|237794 PRK14705, PRK14705, glycogen branching enzyme; Provisional	Back alignment and domain information

>gnl\|CDD\|200464 cd11325, AmyAc_GTHase, Alpha amylase catalytic domain found in Glycosyltrehalose trehalohydrolase (also called Maltooligosyl trehalose Trehalohydrolase)	Back alignment and domain information

>gnl\|CDD\|233850 TIGR02402, trehalose_TreZ, malto-oligosyltrehalose trehalohydrolase	Back alignment and domain information

>gnl\|CDD\|200488 cd11350, AmyAc_4, Alpha amylase catalytic domain found in an uncharacterized protein family	Back alignment and domain information

>gnl\|CDD\|224440 COG1523, PulA, Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|200451 cd00551, AmyAc_family, Alpha amylase catalytic domain family	Back alignment and domain information

>gnl\|CDD\|217288 pfam02922, CBM_48, Carbohydrate-binding module 48 (Isoamylase N-terminal domain)	Back alignment and domain information

>gnl\|CDD\|200452 cd11313, AmyAc_arch_bac_AmyA, Alpha amylase catalytic domain found in archaeal and bacterial Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase)	Back alignment and domain information

>gnl\|CDD\|233730 TIGR02104, pulA_typeI, pullulanase, type I	Back alignment and domain information

>gnl\|CDD\|200465 cd11326, AmyAc_Glg_debranch, Alpha amylase catalytic domain found in glycogen debranching enzymes	Back alignment and domain information

>gnl\|CDD\|131155 TIGR02100, glgX_debranch, glycogen debranching enzyme GlgX	Back alignment and domain information

>gnl\|CDD\|199885 cd02855, E_set_GBE_prok_N, N-terminal Early set domain associated with the catalytic domain of prokaryotic glycogen branching enzyme	Back alignment and domain information

>gnl\|CDD\|214758 smart00642, Aamy, Alpha-amylase domain	Back alignment and domain information

>gnl\|CDD\|233728 TIGR02102, pullulan_Gpos, pullulanase, extracellular, Gram-positive	Back alignment and domain information

>gnl\|CDD\|200455 cd11316, AmyAc_bac2_AmyA, Alpha amylase catalytic domain found in bacterial Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase)	Back alignment and domain information

>gnl\|CDD\|200469 cd11330, AmyAc_OligoGlu, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase) and related proteins	Back alignment and domain information

>gnl\|CDD\|215737 pfam00128, Alpha-amylase, Alpha amylase, catalytic domain	Back alignment and domain information

>gnl\|CDD\|223443 COG0366, AmyA, Glycosidases [Carbohydrate transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|200479 cd11340, AmyAc_bac_CMD_like_3, Alpha amylase catalytic domain found in bacterial cyclomaltodextrinases and related proteins	Back alignment and domain information

>gnl\|CDD\|200477 cd11338, AmyAc_CMD, Alpha amylase catalytic domain found in cyclomaltodextrinases and related proteins	Back alignment and domain information

>gnl\|CDD\|235152 PRK03705, PRK03705, glycogen debranching enzyme; Provisional	Back alignment and domain information

>gnl\|CDD\|200480 cd11341, AmyAc_Pullulanase_LD-like, Alpha amylase catalytic domain found in Pullulanase (also called dextrinase; alpha-dextrin endo-1,6-alpha glucosidase), limit dextrinase, and related proteins	Back alignment and domain information

>gnl\|CDD\|200458 cd11319, AmyAc_euk_AmyA, Alpha amylase catalytic domain found in eukaryotic Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase)	Back alignment and domain information

>gnl\|CDD\|200478 cd11339, AmyAc_bac_CMD_like_2, Alpha amylase catalytic domain found in bacterial cyclomaltodextrinases and related proteins	Back alignment and domain information

>gnl\|CDD\|200459 cd11320, AmyAc_AmyMalt_CGTase_like, Alpha amylase catalytic domain found in maltogenic amylases, cyclodextrin glycosyltransferase, and related proteins	Back alignment and domain information

>gnl\|CDD\|200453 cd11314, AmyAc_arch_bac_plant_AmyA, Alpha amylase catalytic domain found in archaeal, bacterial, and plant Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase)	Back alignment and domain information

>gnl\|CDD\|200486 cd11348, AmyAc_2, Alpha amylase catalytic domain found in an uncharacterized protein family	Back alignment and domain information

>gnl\|CDD\|200476 cd11337, AmyAc_CMD_like, Alpha amylase catalytic domain found in cyclomaltodextrinases and related proteins	Back alignment and domain information

>gnl\|CDD\|200489 cd11352, AmyAc_5, Alpha amylase catalytic domain found in an uncharacterized protein family	Back alignment and domain information

>gnl\|CDD\|215519 PLN02960, PLN02960, alpha-amylase	Back alignment and domain information

>gnl\|CDD\|200490 cd11353, AmyAc_euk_bac_CMD_like, Alpha amylase catalytic domain found in eukaryotic and bacterial cyclomaltodextrinases and related proteins	Back alignment and domain information

>gnl\|CDD\|200484 cd11346, AmyAc_plant_IsoA, Alpha amylase catalytic domain family found in plant isoamylases	Back alignment and domain information

>gnl\|CDD\|199878 cd02688, E_set, Early set domain associated with the catalytic domain of sugar utilizing enzymes at either the N or C terminus	Back alignment and domain information

>gnl\|CDD\|200467 cd11328, AmyAc_maltase, Alpha amylase catalytic domain found in maltase (also known as alpha glucosidase) and related proteins	Back alignment and domain information

>gnl\|CDD\|200471 cd11332, AmyAc_OligoGlu_TS, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), trehalose synthase (also called maltose alpha-D-glucosyltransferase), and related proteins	Back alignment and domain information

>gnl\|CDD\|178782 PLN03244, PLN03244, alpha-amylase; Provisional	Back alignment and domain information

>gnl\|CDD\|200454 cd11315, AmyAc_bac1_AmyA, Alpha amylase catalytic domain found in bacterial Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase)	Back alignment and domain information

>gnl\|CDD\|200466 cd11327, AmyAc_Glg_debranch_2, Alpha amylase catalytic domain found in glycogen debranching enzymes	Back alignment and domain information

>gnl\|CDD\|237739 PRK14510, PRK14510, putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional	Back alignment and domain information

>gnl\|CDD\|200470 cd11331, AmyAc_OligoGlu_like, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase) and related proteins	Back alignment and domain information

>gnl\|CDD\|200473 cd11334, AmyAc_TreS, Alpha amylase catalytic domain found in Trehalose synthetase	Back alignment and domain information

>gnl\|CDD\|199892 cd07184, E_set_Isoamylase_like_N, N-terminal Early set domain associated with the catalytic domain of isoamylase-like (also called glycogen 6-glucanohydrolase) proteins	Back alignment and domain information

>gnl\|CDD\|200472 cd11333, AmyAc_SI_OligoGlu_DGase, Alpha amylase catalytic domain found in Sucrose isomerases, oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), dextran glucosidase (also called glucan 1,6-alpha-glucosidase), and related proteins	Back alignment and domain information

>gnl\|CDD\|200491 cd11354, AmyAc_bac_CMD_like, Alpha amylase catalytic domain found in bacterial cyclomaltodextrinases and related proteins	Back alignment and domain information

>gnl\|CDD\|233874 TIGR02456, treS_nterm, trehalose synthase	Back alignment and domain information

>gnl\|CDD\|236543 PRK09505, malS, alpha-amylase; Reviewed	Back alignment and domain information

>gnl\|CDD\|236518 PRK09441, PRK09441, cytoplasmic alpha-amylase; Reviewed	Back alignment and domain information

>gnl\|CDD\|233851 TIGR02403, trehalose_treC, alpha,alpha-phosphotrehalase	Back alignment and domain information

>gnl\|CDD\|199890 cd02860, E_set_Pullulanase, Early set domain associated with the catalytic domain of pullulanase (also called dextrinase and alpha-dextrin endo-1,6-alpha glucosidase)	Back alignment and domain information

>gnl\|CDD\|182849 PRK10933, PRK10933, trehalose-6-phosphate hydrolase; Provisional	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		765
PLN02447		758	1,4-alpha-glucan-branching enzyme	100.0
KOG0470		757	consensus 1,4-alpha-glucan branching enzyme/starch	100.0
PLN03244		872	alpha-amylase; Provisional	100.0
PLN02960		897	alpha-amylase	100.0
PRK12568		730	glycogen branching enzyme; Provisional	100.0
PRK14706		639	glycogen branching enzyme; Provisional	100.0
PRK14705		1224	glycogen branching enzyme; Provisional	100.0
PRK05402		726	glycogen branching enzyme; Provisional	100.0
PRK12313		633	glycogen branching enzyme; Provisional	100.0
TIGR01515		613	branching_enzym alpha-1,4-glucan:alpha-1,4-glucan	100.0
COG0296		628	GlgB 1,4-alpha-glucan branching enzyme [Carbohydra	100.0
TIGR02104		605	pulA_typeI pullulanase, type I. Pullulan is an unu	100.0
TIGR02402		542	trehalose_TreZ malto-oligosyltrehalose trehalohydr	100.0
TIGR02100		688	glgX_debranch glycogen debranching enzyme GlgX. Th	100.0
PRK03705		658	glycogen debranching enzyme; Provisional	100.0
TIGR02102		1111	pullulan_Gpos pullulanase, extracellular, Gram-pos	100.0
TIGR02103		898	pullul_strch alpha-1,6-glucosidases, pullulanase-t	100.0
PLN02877		970	alpha-amylase/limit dextrinase	100.0
PRK14510		1221	putative bifunctional 4-alpha-glucanotransferase/g	100.0
COG1523		697	PulA Type II secretory pathway, pullulanase PulA a	100.0
PRK10785		598	maltodextrin glucosidase; Provisional	100.0
PRK10933		551	trehalose-6-phosphate hydrolase; Provisional	100.0
TIGR02456		539	treS_nterm trehalose synthase. Trehalose synthase	100.0
TIGR02403		543	trehalose_treC alpha,alpha-phosphotrehalase. Treha	100.0
PRK09505		683	malS alpha-amylase; Reviewed	100.0
PRK09441		479	cytoplasmic alpha-amylase; Reviewed	100.0
PF00128		316	Alpha-amylase: Alpha amylase, catalytic domain; In	100.0
PLN00196		428	alpha-amylase; Provisional	100.0
PLN02361		401	alpha-amylase	100.0
PLN02784		894	alpha-amylase	100.0
TIGR03852		470	sucrose_gtfA sucrose phosphorylase. In the forward	100.0
PRK13840		495	sucrose phosphorylase; Provisional	100.0
COG0366		505	AmyA Glycosidases [Carbohydrate transport and meta	100.0
TIGR02455		688	TreS_stutzeri trehalose synthase, Pseudomonas stut	100.0
KOG0471		545	consensus Alpha-amylase [Carbohydrate transport an	99.98
TIGR02401		825	trehalose_TreY malto-oligosyltrehalose synthase. T	99.96
PRK14511		879	maltooligosyl trehalose synthase; Provisional	99.9
smart00642		166	Aamy Alpha-amylase domain.	99.86
PF14872		811	GHL5: Hypothetical glycoside hydrolase 5	99.81
KOG2212		504	consensus Alpha-amylase [Carbohydrate transport an	99.81
cd02854		99	Glycogen_branching_enzyme_like_N_term Glycogen bra	99.79
TIGR01531		1464	glyc_debranch glycogen debranching enzymye. glycog	99.63
PRK14507		1693	putative bifunctional 4-alpha-glucanotransferase/m	99.61
PF02922		85	CBM_48: Carbohydrate-binding module 48 (Isoamylase	99.47
cd02860		100	Pullulanase_N_term Pullulanase domain N-terminus.	99.43
COG3280		889	TreY Maltooligosyl trehalose synthase [Carbohydrat	99.35
cd02855		106	Glycogen_branching_enzyme_N_term Glycogen branchin	99.34
cd02856		103	Glycogen_debranching_enzyme_N_term Glycogen_debran	99.31
cd02853		85	MTHase_N_term Maltooligosyl trehalose synthase (MT	99.22
cd02852		119	Isoamylase_N_term Isoamylase N-terminus domain. Is	99.05
PRK05402		726	glycogen branching enzyme; Provisional	98.91
cd02858		85	Esterase_N_term Esterase N-terminal domain. Estera	98.83
cd02861		82	E_set_proteins_like E or "early" set-like proteins	98.68
PF02638		311	DUF187: Glycosyl hydrolase like GH101; InterPro: I	98.63
cd02688		83	E_set E or "early" set of sugar utilizing enzymes	98.47
PF14701		423	hDGE_amylase: glucanotransferase domain of human g	98.38
PF14871		132	GHL6: Hypothetical glycosyl hydrolase 6	98.26
PRK14508		497	4-alpha-glucanotransferase; Provisional	98.13
COG1649		418	Uncharacterized protein conserved in bacteria [Fun	98.0
PF02324		809	Glyco_hydro_70: Glycosyl hydrolase family 70; Inte	97.97
PF02446		496	Glyco_hydro_77: 4-alpha-glucanotransferase; InterP	97.74
cd02859		79	AMPKbeta_GBD_like AMP-activated protein kinase (AM	97.73
PLN02635		538	disproportionating enzyme	97.63
cd06597		340	GH31_transferase_CtsY CtsY (cyclic tetrasaccharide	97.44
cd06594		317	GH31_glucosidase_YihQ YihQ is a bacterial alpha-gl	97.4
PF02065		394	Melibiase: Melibiase; InterPro: IPR000111 O-Glycos	97.38
cd06593		308	GH31_xylosidase_YicI YicI alpha-xylosidase is a gl	97.27
cd06592		303	GH31_glucosidase_KIAA1161 KIAA1161 is an uncharact	97.21
KOG3625		1521	consensus Alpha amylase [Carbohydrate transport an	96.87
cd06600		317	GH31_MGAM-like This family includes the following	96.85
PF13200		316	DUF4015: Putative glycosyl hydrolase domain	96.84
cd06591		319	GH31_xylosidase_XylS XylS is a glycosyl hydrolase	96.67
PF00150		281	Cellulase: Cellulase (glycosyl hydrolase family 5)	96.56
PRK14510		1221	putative bifunctional 4-alpha-glucanotransferase/g	96.56
cd06599		317	GH31_glycosidase_Aec37 Glycosyl hydrolase family 3	96.5
PRK14582		671	pgaB outer membrane N-deacetylase; Provisional	96.44
cd06602		339	GH31_MGAM_SI_GAA This family includes the followin	96.42
PLN02950		909	4-alpha-glucanotransferase	96.4
PF13199		559	Glyco_hydro_66: Glycosyl hydrolase family 66; PDB:	96.35
PF11941		89	DUF3459: Domain of unknown function (DUF3459); Int	96.19
PRK10426		635	alpha-glucosidase; Provisional	96.16
PRK11052		695	malQ 4-alpha-glucanotransferase; Provisional	96.09
COG1640		520	MalQ 4-alpha-glucanotransferase [Carbohydrate tran	96.08
cd06604		339	GH31_glucosidase_II_MalA Alpha-glucosidase II (alp	96.0
PF01055		441	Glyco_hydro_31: Glycosyl hydrolases family 31 ; In	95.84
cd06595		292	GH31_xylosidase_XylS-like This family represents a	95.04
TIGR00217		513	malQ 4-alpha-glucanotransferase. This enzyme is kn	94.68
PRK10658		665	putative alpha-glucosidase; Provisional	94.63
cd06598		317	GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide	94.48
PF02324		809	Glyco_hydro_70: Glycosyl hydrolase family 70; Inte	94.47
TIGR01370		315	cysRS possible cysteinyl-tRNA synthetase, Methanoc	94.4
cd06542		255	GH18_EndoS-like Endo-beta-N-acetylglucosaminidases	94.1
PF07745		332	Glyco_hydro_53: Glycosyl hydrolase family 53; Inte	93.99
PRK14507		1693	putative bifunctional 4-alpha-glucanotransferase/m	93.78
cd02875		358	GH18_chitobiase Chitobiase (also known as di-N-ace	93.35
cd06564		326	GH20_DspB_LnbB-like Glycosyl hydrolase family 20 (	93.21
cd06562		348	GH20_HexA_HexB-like Beta-N-acetylhexosaminidases c	92.73
COG1501		772	Alpha-glucosidases, family 31 of glycosyl hydrolas	92.6
cd06603		339	GH31_GANC_GANAB_alpha This family includes the clo	92.07
cd06601		332	GH31_lyase_GLase GLases (alpha-1,4-glucan lyases)	91.61
cd02742		303	GH20_hexosaminidase Beta-N-acetylhexosaminidases o	91.59
KOG3625		1521	consensus Alpha amylase [Carbohydrate transport an	90.8
PF14488		166	DUF4434: Domain of unknown function (DUF4434)	90.69
KOG1065		805	consensus Maltase glucoamylase and related hydrola	90.38
cd06545		253	GH18_3CO4_chitinase The Bacteroides thetaiotaomicr	89.8
cd06589		265	GH31 The enzymes of glycosyl hydrolase family 31 (	89.0
PLN02763		978	hydrolase, hydrolyzing O-glycosyl compounds	88.73
smart00812		384	Alpha_L_fucos Alpha-L-fucosidase. O-Glycosyl hydro	88.24
cd06565		301	GH20_GcnA-like Glycosyl hydrolase family 20 (GH20)	88.2
PF01120		346	Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR00	88.06
PF14883		294	GHL13: Hypothetical glycosyl hydrolase family 13	87.97
cd06568		329	GH20_SpHex_like A subgroup of the Glycosyl hydrola	87.79
PF02449		374	Glyco_hydro_42: Beta-galactosidase; InterPro: IPR0	86.62
cd02871		312	GH18_chitinase_D-like GH18 domain of Chitinase D (	86.02
COG3867		403	Arabinogalactan endo-1,4-beta-galactosidase [Carbo	85.95
cd05808		95	CBM20_alpha_amylase Alpha-amylase, C-terminal CBM2	84.4
cd06547		339	GH85_ENGase Endo-beta-N-acetylglucosaminidase (ENG	82.24
PRK12568		730	glycogen branching enzyme; Provisional	81.3

>PLN02447 1,4-alpha-glucan-branching enzyme	Back alignment and domain information

Probab=100.00  E-value=8.4e-131  Score=1142.47  Aligned_cols=648  Identities=73%  Similarity=1.264  Sum_probs=599.0

Q ss_pred             cCccEeeCCCCCCCCCCccccccCCCccccchhhccccchhhhccccccccccCCcccccCcccccchhhhhccCCCCCC
Q 004253           64 ASEKVLVPGSQSDDPSAVTDQLETPETVSEDIEVRNGIESLQMEDNENVEIEDHGPVTLQGKVSSEKSEVKREVGPRSIP  143 (765)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (765)
                      .+..++.|++++++.++++.+...+.......++.+.....+.+                           .......+|
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~   54 (758)
T PLN02447          2 LSEHVLSPDGLPDSAPSPSPAVDEPRPEDPGSPATEAPYPAKTE---------------------------DNSAAASPP   54 (758)
T ss_pred             CccccccCCCcCCCCCCCCCCCCcCCCCCcccccccCCcccccc---------------------------cccccccCC
Confidence            46778999999999988877777766333333322222222221                           001222688


Q ss_pred             CCCCCCcceecCCCCccchHHHHHHHHHHHHHHHHHHhccCchhhhhcccccCCcEEeCCcEEEEEecCCcCeEEEEeec
Q 004253          144 PPGAGQNIYEIDPNLLGHRQHLDYRYGRYKQMCEDIDKYEGGLAAFSRGYEKFGFIRSDTGITYREWAPGAKSASLIGDF  223 (765)
Q Consensus       144 ~~~~~~~~~~~dp~l~~~~~~l~~R~~~~~~~~~~i~~~~g~l~~fa~gy~~lG~~~~~~gv~FrvWAP~A~~V~L~gdF  223 (765)
                      +|.++.+|+++||||+||+++|++|+..|.+++++|.+.+|||++||++|++||+|+.++||+||||||+|++|+|+|||
T Consensus        55 ~~~~~~~~~~~d~~l~~~~~~~~~r~~~~~~~~~~i~~~~~~l~~f~~~y~~lGa~~~~~g~~FrvWAP~A~~V~LvGdF  134 (758)
T PLN02447         55 PPGDGLGIYEIDPMLEPYEDHLRYRYSRYRRRREEIEKNEGGLEAFSRGYEKFGFNRSEGGITYREWAPGAKAAALIGDF  134 (758)
T ss_pred             CCCCcceeeecCcchhhHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHhceeEEecCCEEEEEECCCCCEEEEEEec
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCccCCccCCCceEEEEeCCCCCCCCCCCCCCEEEEEeeCCCC-ccccCCccceeeccCCCC--CCCCcEEeCCCc
Q 004253          224 NNWNPNADIMTQNEFGVWEIFLPNNADGSPPIPHGSRVKIHMDTPSG-IKDSIPAWIKFSVQAPGE--IPYNGIYYDPPE  300 (765)
Q Consensus       224 N~w~~~~~~m~~~~~GvW~i~lp~~~~G~~~~~~g~~y~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~dp~~  300 (765)
                      |+|+...++|++.++|+|+++||+ .+|.+.++||++|||++.+.+| ..+++|||++++++.++.  ..+++++|||++
T Consensus       135 N~W~~~~~~M~~~~~GvWe~~ip~-~~g~~~~~~G~~Yky~i~~~~g~~~~r~dpya~~~~~~p~~~~~~~~svv~dp~~  213 (758)
T PLN02447        135 NNWNPNAHWMTKNEFGVWEIFLPD-ADGSPAIPHGSRVKIRMETPDGRWVDRIPAWIKYAVQAPGEIGAPYNGVYWDPPE  213 (758)
T ss_pred             CCCCCCccCceeCCCCEEEEEECC-ccccccCCCCCEEEEEEEeCCCcEEeecCchHheeeccCCccCCCCceEEeCCCC
Confidence            999998999999999999999999 8899999999999999998765 468999999999988775  367999999976


Q ss_pred             cccccccCCCCCCCCCceEEEeecCCCCCCCCCCCHHhhHhhhhhHHHHcCCCEEEECCcccCCCCCCCCCccccccCCC
Q 004253          301 EEKYVFQHPQPKKPKSLRIYEAHVGMSSTEPIINTYANFRDDVLPRIKRLGYNAVQIMAVQEHSYYASFGYHVTNFFAPS  380 (765)
Q Consensus       301 ~~~~~~~~~~~~~~~~~vIYE~hv~~~s~~~~~Gt~~~~~~~~L~yLk~LGvt~I~L~Pi~e~~~~~~~GY~~~~~~a~~  380 (765)
                      .++|.|++++++.+.+++|||+|||+++.+++.|||+++++++|||||+|||||||||||++++++++|||++++||+|+
T Consensus       214 ~~~y~w~~~~~~~~~~~~IYE~Hvg~~~~~~~~gty~~~~~~~L~ylk~LG~t~I~LmPi~e~~~~~~wGY~~~~~fa~~  293 (758)
T PLN02447        214 EEKYVFKHPRPPRPAALRIYEAHVGMSSEEPKVNSYREFADDVLPRIKALGYNAVQLMAIQEHAYYGSFGYHVTNFFAVS  293 (758)
T ss_pred             CCCCCCCCCCCCCCCCCEEEEEeCCcccCCCCCCCHHHHHHHHHHHHHHcCCCEEEECCccccCCCCCCCcCcccCcccc
Confidence            66799999888778899999999999998888999999998899999999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHHHHHHHhhcCCEEEEeeccccccCCCcccCcCCCCCCCCCcccCCCCCcccCCCCCCCCCCHHHHHHHHH
Q 004253          381 SRCGTPDDLKSLIDKAHELGLLVLMDIVHSHASNNVLDGLNMFDGTDGHYFHSGSRGYHWMWDSRLFNYGSWEVLRFLLS  460 (765)
Q Consensus       381 ~~~Gt~~efk~LV~~aH~~GI~VIlDvV~NH~~~~~~~~~~~f~g~~~~yf~~~~~g~~~~w~~~~ln~~~~~v~~~i~~  460 (765)
                      ++|||++|||+||++||++||+||||||+||++.+..++++.|+|+...||+.+.+++++.|++.+||+++++|++||++
T Consensus       294 ~~~Gtp~dlk~LVd~aH~~GI~VilDvV~nH~~~~~~~gl~~fDg~~~~Yf~~~~~g~~~~w~~~~~N~~~~eVr~fLl~  373 (758)
T PLN02447        294 SRSGTPEDLKYLIDKAHSLGLRVLMDVVHSHASKNTLDGLNGFDGTDGSYFHSGPRGYHWLWDSRLFNYGNWEVLRFLLS  373 (758)
T ss_pred             cccCCHHHHHHHHHHHHHCCCEEEEEeccccccccccccccccCCCCccccccCCCCCcCcCCCceecCCCHHHHHHHHH
Confidence            99999999999999999999999999999999998777888999988889998888889999999999999999999999


Q ss_pred             HHHHHHHHcCCcEEEecccccccccccCccccccCCCCcccCccCChhHHHHHHHHHHHHhhcCCCceEEeeccCCCCcc
Q 004253          461 NARWWLEEYKFDGFRFDGVTSMMYTHHGLQVAFTGNYSEYFGFATDVDAVVYLMLVNDMIHGLYPEAVSIGEDVSGMPTF  540 (765)
Q Consensus       461 ~l~~W~~e~gvDGFRfD~v~~m~~~~~g~~~~f~~~~~~~~g~~~d~~a~~~l~~~~~~v~~~~p~~i~iaE~~~~~p~~  540 (765)
                      +++||++||||||||||+|++|+|.|||+..+|+++|++|||+.+|.+++.||+++|+.+++.+|++++|||+++++|.+
T Consensus       374 ~~~~Wl~ey~IDGfRfDaV~smlY~~hg~~~~f~~~~~~~~g~~~d~~a~~fL~~~N~~i~~~~p~~~~IAEd~s~~p~l  453 (758)
T PLN02447        374 NLRWWLEEYKFDGFRFDGVTSMLYHHHGLQMAFTGNYNEYFGMATDVDAVVYLMLANDLLHGLYPEAVTIAEDVSGMPTL  453 (758)
T ss_pred             HHHHHHHHhCcccccccchhhhhccccCcccccccCcccccCCccChHHHHHHHHHHHHHHHhCCCeEEEEEcCCCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCcccchhhhHHHHHHHHHHHhh-hhhhhhhhhhHhhhccccccccceecccCccccccCccchhhhccChhhH
Q 004253          541 CIPVQDGGVGFDYRLQMAIADKWIELLKK-RDEDWKMGAIVHTMTNRRWLEKCVAYAESHDQALVGDKTIAFWLMDKDMY  619 (765)
Q Consensus       541 ~~~~~~gg~gfD~~l~~~~~d~~~~~lk~-~~~~~~~~~~~~~l~~~~~~~~~v~f~enHD~~r~g~kt~~~~~~~~~~~  619 (765)
                      |+++..||+||||+|+|+|++.|+++++. .++.|.++.+.++++++++.+++|.|++|||++++|+|++++|+|+++||
T Consensus       454 ~~p~~~GGlGFDykw~Mg~~~~~l~~l~~~~d~~~~~~~l~~sl~~r~~~E~~I~y~eSHDevv~Gkksl~~~l~d~~my  533 (758)
T PLN02447        454 CRPVQEGGVGFDYRLAMAIPDKWIELLKEKRDEDWSMGDIVHTLTNRRYTEKCVAYAESHDQALVGDKTIAFWLMDKEMY  533 (758)
T ss_pred             cccCCCCcCCcceEECCccchHHHHHHhhCCCcccCHHHHHHHHhcccccCceEeccCCcCeeecCcchhHhhhcchhhh
Confidence            99999999999999999999999999995 68899999999999999999999999999999999999999999999999


Q ss_pred             hhhhcCCCCCccchhhHHHHHHHHHHHHhcCCcceeecccccccCCCCCCCCCCCCCCCCCCcCCCCCCCCcCCccccCC
Q 004253          620 DFMALDRPSTPRIDRGIALHKMIRLVTMGLGGEAYLNFMGNEFGHPEWIDFPRGDQRLPNGQFVPGNNFSYDKCRRRFDL  699 (765)
Q Consensus       620 ~~~~~~~~~~~~~~~g~~l~k~a~lllltlpG~P~l~yyGdE~G~~e~~d~p~~~~~dp~~~~~~gn~~s~~~~R~~~~w  699 (765)
                      +.|+.++..++.++|+++||||++++++++||.++|||||+||||++|+|||++           ||+||++++|++|++
T Consensus       534 ~~m~~~~~~~~~~~R~~~lhkmirl~~~~~pG~g~L~FMGnEFg~~ew~Dfpr~-----------~n~ws~~~~~~~W~L  602 (758)
T PLN02447        534 DGMSTLTPATPVVDRGIALHKMIRLITMALGGEGYLNFMGNEFGHPEWIDFPRE-----------GNGWSYDKCRRRWDL  602 (758)
T ss_pred             hcCCCChhhhhhHHHHHHHHHHHHHHHHhCCCCcceeecccccCCchhccCccc-----------ccccCcccccCCccc
Confidence            999999999999999999999999999999999888899999999999999995           999999999999999


Q ss_pred             CCccccccccHHHHHHHHHHHHHHcCCCCCCCeEEEEEcCCCEEEEEEecC
Q 004253          700 GDADYLRYRGMQEFDRAMQHLEEKYGFMTSEHQYVSRKDQGDRGGMMTDLI  750 (765)
Q Consensus       700 ~~~~~~~~~~l~~f~r~Li~lRk~~~~L~~~~~~i~~~~~~~~vlvf~r~s  750 (765)
                      .+.+.++|+.|++|+|+||+|++++++|..+..++.+.+++++||||+|..
T Consensus       603 ~d~~~l~~~~l~~f~~~L~~l~~~~~~L~~~~~~i~~~d~~~~Viaf~R~~  653 (758)
T PLN02447        603 ADADHLRYKFLNAFDRAMMHLDEKYGFLTSEHQYVSRKDEGDKVIVFERGD  653 (758)
T ss_pred             cCCCchhhhHHHHHHHHHHHHHhcCccccCCCceeeeecCCCCEEEEEeCC
Confidence            877777999999999999999999999999999999999999999888753

>KOG0470 consensus 1,4-alpha-glucan branching enzyme/starch branching enzyme II [Carbohydrate transport and metabolism]	Back alignment and domain information

>PLN03244 alpha-amylase; Provisional	Back alignment and domain information

>PLN02960 alpha-amylase	Back alignment and domain information

>PRK12568 glycogen branching enzyme; Provisional	Back alignment and domain information

>PRK14706 glycogen branching enzyme; Provisional	Back alignment and domain information

>PRK14705 glycogen branching enzyme; Provisional	Back alignment and domain information

>PRK05402 glycogen branching enzyme; Provisional	Back alignment and domain information

>PRK12313 glycogen branching enzyme; Provisional	Back alignment and domain information

>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase	Back alignment and domain information

>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]	Back alignment and domain information

>TIGR02104 pulA_typeI pullulanase, type I	Back alignment and domain information

>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase	Back alignment and domain information

>TIGR02100 glgX_debranch glycogen debranching enzyme GlgX	Back alignment and domain information

>PRK03705 glycogen debranching enzyme; Provisional	Back alignment and domain information

>TIGR02102 pullulan_Gpos pullulanase, extracellular, Gram-positive	Back alignment and domain information

>TIGR02103 pullul_strch alpha-1,6-glucosidases, pullulanase-type	Back alignment and domain information

>PLN02877 alpha-amylase/limit dextrinase	Back alignment and domain information

>PRK14510 putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional	Back alignment and domain information

>COG1523 PulA Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism]	Back alignment and domain information

>PRK10785 maltodextrin glucosidase; Provisional	Back alignment and domain information

>PRK10933 trehalose-6-phosphate hydrolase; Provisional	Back alignment and domain information

>TIGR02456 treS_nterm trehalose synthase	Back alignment and domain information

>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase	Back alignment and domain information

>PRK09505 malS alpha-amylase; Reviewed	Back alignment and domain information

>PRK09441 cytoplasmic alpha-amylase; Reviewed	Back alignment and domain information

>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3	Back alignment and domain information

>PLN00196 alpha-amylase; Provisional	Back alignment and domain information

>PLN02361 alpha-amylase	Back alignment and domain information

>PLN02784 alpha-amylase	Back alignment and domain information

>TIGR03852 sucrose_gtfA sucrose phosphorylase	Back alignment and domain information

>PRK13840 sucrose phosphorylase; Provisional	Back alignment and domain information

>COG0366 AmyA Glycosidases [Carbohydrate transport and metabolism]	Back alignment and domain information

>TIGR02455 TreS_stutzeri trehalose synthase, Pseudomonas stutzeri type	Back alignment and domain information

>KOG0471 consensus Alpha-amylase [Carbohydrate transport and metabolism]	Back alignment and domain information

>TIGR02401 trehalose_TreY malto-oligosyltrehalose synthase	Back alignment and domain information

>PRK14511 maltooligosyl trehalose synthase; Provisional	Back alignment and domain information

>smart00642 Aamy Alpha-amylase domain	Back alignment and domain information

>PF14872 GHL5: Hypothetical glycoside hydrolase 5	Back alignment and domain information

>KOG2212 consensus Alpha-amylase [Carbohydrate transport and metabolism]	Back alignment and domain information

>cd02854 Glycogen_branching_enzyme_like_N_term Glycogen branching enzyme-like N-terminus domain	Back alignment and domain information

>TIGR01531 glyc_debranch glycogen debranching enzymye	Back alignment and domain information

>PRK14507 putative bifunctional 4-alpha-glucanotransferase/malto-oligosyltrehalose synthase; Provisional	Back alignment and domain information

>PF02922 CBM_48: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); InterPro: IPR004193 O-Glycosyl hydrolases 3	Back alignment and domain information

>cd02860 Pullulanase_N_term Pullulanase domain N-terminus	Back alignment and domain information

>COG3280 TreY Maltooligosyl trehalose synthase [Carbohydrate transport and metabolism]	Back alignment and domain information

>cd02855 Glycogen_branching_enzyme_N_term Glycogen branching enzyme N-terminus domain	Back alignment and domain information

>cd02856 Glycogen_debranching_enzyme_N_term Glycogen_debranching_enzyme N-terminal domain	Back alignment and domain information

>cd02853 MTHase_N_term Maltooligosyl trehalose synthase (MTSase) N-terminus domain	Back alignment and domain information

>cd02852 Isoamylase_N_term Isoamylase N-terminus domain	Back alignment and domain information

>PRK05402 glycogen branching enzyme; Provisional	Back alignment and domain information

>cd02858 Esterase_N_term Esterase N-terminal domain	Back alignment and domain information

>cd02861 E_set_proteins_like E or "early" set-like proteins	Back alignment and domain information

>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function	Back alignment and domain information

>cd02688 E_set E or "early" set of sugar utilizing enzymes which may be related to the immunoglobulin and/or fibronectin type III superfamilies	Back alignment and domain information

>PF14701 hDGE_amylase: glucanotransferase domain of human glycogen debranching enzyme	Back alignment and domain information

>PF14871 GHL6: Hypothetical glycosyl hydrolase 6	Back alignment and domain information

>PRK14508 4-alpha-glucanotransferase; Provisional	Back alignment and domain information

>COG1649 Uncharacterized protein conserved in bacteria [Function unknown]	Back alignment and domain information

>PF02324 Glyco_hydro_70: Glycosyl hydrolase family 70; InterPro: IPR003318 O-Glycosyl hydrolases 3	Back alignment and domain information

>PF02446 Glyco_hydro_77: 4-alpha-glucanotransferase; InterPro: IPR003385 O-Glycosyl hydrolases 3	Back alignment and domain information

>cd02859 AMPKbeta_GBD_like AMP-activated protein kinase (AMPK) beta subunit glycogen binding domain (GBD)	Back alignment and domain information

>PLN02635 disproportionating enzyme	Back alignment and domain information

>cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ	Back alignment and domain information

>cd06594 GH31_glucosidase_YihQ YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride	Back alignment and domain information

>PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3	Back alignment and domain information

>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose	Back alignment and domain information

>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase	Back alignment and domain information

>KOG3625 consensus Alpha amylase [Carbohydrate transport and metabolism]	Back alignment and domain information

>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II	Back alignment and domain information

>PF13200 DUF4015: Putative glycosyl hydrolase domain	Back alignment and domain information

>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate	Back alignment and domain information

>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3	Back alignment and domain information

>PRK14510 putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional	Back alignment and domain information

>cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37	Back alignment and domain information

>PRK14582 pgaB outer membrane N-deacetylase; Provisional	Back alignment and domain information

>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase	Back alignment and domain information

>PLN02950 4-alpha-glucanotransferase	Back alignment and domain information

>PF13199 Glyco_hydro_66: Glycosyl hydrolase family 66; PDB: 3VMO_A 3VMN_A 3VMP_A	Back alignment and domain information

>PF11941 DUF3459: Domain of unknown function (DUF3459); InterPro: IPR022567 This functionally uncharacterised domain is found in bacteria	Back alignment and domain information

>PRK10426 alpha-glucosidase; Provisional	Back alignment and domain information

>PRK11052 malQ 4-alpha-glucanotransferase; Provisional	Back alignment and domain information

>COG1640 MalQ 4-alpha-glucanotransferase [Carbohydrate transport and metabolism]	Back alignment and domain information

>cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities	Back alignment and domain information

>PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3	Back alignment and domain information

>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus	Back alignment and domain information

>TIGR00217 malQ 4-alpha-glucanotransferase	Back alignment and domain information

>PRK10658 putative alpha-glucosidase; Provisional	Back alignment and domain information

>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY	Back alignment and domain information

>PF02324 Glyco_hydro_70: Glycosyl hydrolase family 70; InterPro: IPR003318 O-Glycosyl hydrolases 3	Back alignment and domain information

>TIGR01370 cysRS possible cysteinyl-tRNA synthetase, Methanococcus type	Back alignment and domain information

>cd06542 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases are bacterial chitinases that hydrolyze the chitin core of various asparagine (N)-linked glycans and glycoproteins	Back alignment and domain information

>PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3	Back alignment and domain information

>PRK14507 putative bifunctional 4-alpha-glucanotransferase/malto-oligosyltrehalose synthase; Provisional	Back alignment and domain information

>cd02875 GH18_chitobiase Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes	Back alignment and domain information

>cd06564 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins	Back alignment and domain information

>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides	Back alignment and domain information

>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism]	Back alignment and domain information

>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB)	Back alignment and domain information

>cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end	Back alignment and domain information

>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides	Back alignment and domain information

>KOG3625 consensus Alpha amylase [Carbohydrate transport and metabolism]	Back alignment and domain information

>PF14488 DUF4434: Domain of unknown function (DUF4434)	Back alignment and domain information

>KOG1065 consensus Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism]	Back alignment and domain information

>cd06545 GH18_3CO4_chitinase The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas	Back alignment and domain information

>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase	Back alignment and domain information

>PLN02763 hydrolase, hydrolyzing O-glycosyl compounds	Back alignment and domain information

>smart00812 Alpha_L_fucos Alpha-L-fucosidase	Back alignment and domain information

>cd06565 GH20_GcnA-like Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins	Back alignment and domain information

>PF01120 Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR000933 O-Glycosyl hydrolases 3	Back alignment and domain information

>PF14883 GHL13: Hypothetical glycosyl hydrolase family 13	Back alignment and domain information

>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex)	Back alignment and domain information

>PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3	Back alignment and domain information

>cd02871 GH18_chitinase_D-like GH18 domain of Chitinase D (ChiD)	Back alignment and domain information

>COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism]	Back alignment and domain information

>cd05808 CBM20_alpha_amylase Alpha-amylase, C-terminal CBM20 (carbohydrate-binding module, family 20) domain	Back alignment and domain information

>cd06547 GH85_ENGase Endo-beta-N-acetylglucosaminidase (ENGase) hydrolyzes the N-N'-diacetylchitobiosyl core of N-glycosylproteins	Back alignment and domain information

>PRK12568 glycogen branching enzyme; Provisional	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		765
3aml_A		755	Structure Of The Starch Branching Enzyme I (Bei) Fr		0.0
3amk_A		702	Structure Of The Starch Branching Enzyme I (Bei) Fr		0.0
3k1d_A		722	Crystal Structure Of Glycogen Branching Enzyme Syno		2e-39
1m7x_A		617	The X-Ray Crystallographic Structure Of Branching E		1e-38
3vgg_A		558	Crystal Structure Of Glycosyltrehalose Trehalohydro		1e-16
1eh9_A		558	Crystal Structure Of Sulfolobus Solfataricus Glycos		1e-16
2bhu_A		602	Crystal Structure Of Deinococcus Radiodurans Maltoo		1e-16
1eha_A		558	Crystal Structure Of Glycosyltrehalose Trehalohydro		1e-16
3vgd_A		558	Ctystal Structure Of Glycosyltrehalose Trehalohydro		3e-16
3vge_A		558	Crystal Structure Of Glycosyltrehalose Trehalohydro		5e-16
2bhy_A		602	Crystal Structure Of Deinococcus Radiodurans Maltoo		1e-15
3m07_A		618	1.4 Angstrom Resolution Crystal Structure Of Putati		1e-13
4gkl_A		422	Crystal Structure Of A Noncanonic Maltogenic Alpha-		9e-09
2vnc_A		718	Crystal Structure Of Glycogen Debranching Enzyme Tr		2e-08
2wsk_A		657	Crystal Structure Of Glycogen Debranching Enzyme Gl		3e-08
2e8y_A		718	Crystal Structure Of Pullulanase Type I From Bacill		2e-07
2ze0_A		555	Alpha-glucosidase Gsj Length = 555		2e-06
3faw_A		877	Crystal Structure Of The Group B Streptococcus Pull		3e-06
1wza_A		488	Crystal Structure Of Alpha-Amylase From H.Orenii Le		9e-06
2wan_A		921	Pullulanase From Bacillus Acidopullulyticus Length		2e-05
2ya2_A		708	Catalytic Module Of The Multi-Modular Glycogen-Degr		3e-05
2ya0_A		714	Catalytic Module Of The Multi-Modular Glycogen-Degr		3e-05
2ya1_A		1014	Product Complex Of A Multi-Modular Glycogen-Degradi		4e-05
3dhu_A		449	Crystal Structure Of An Alpha-Amylase From Lactobac		4e-05
1ea9_C		583	Cyclomaltodextrinase Length = 583		7e-05
1bf2_A		750	Structure Of Pseudomonas Isoamylase Length = 750		3e-04
1j0j_A		588	Crystal Structure Of Neopullulanase E357q Complex W		3e-04
1j0h_A		588	Crystal Structure Of Bacillus Stearothermophilus Ne		3e-04
1d7f_A		686	Crystal Structure Of Asparagine 233-Replaced Cyclod		4e-04
2taa_A		478	Structure And Possible Catalytic Residues Of Taka-A		6e-04
1v3j_A		686	Crystal Structure Of F283l Mutant Cyclodextrin Glyc		8e-04
1v3k_A		686	Crystal Structure Of F283y Mutant Cyclodextrin Glyc		8e-04
1pam_A		686	Cyclodextrin Glucanotransferase Length = 686		8e-04

>pdb|3AML|A Chain A, Structure Of The Starch Branching Enzyme I (Bei) From Oryza Sativa L Length = 755