Citrus Sinensis ID: 004274

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760----
MGNGTSRVVGCFVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFDSPAITPSNSERFTVDSSTLDSETLSGSFRHDSLDDPSGLHKPKSFPETTFKTISGASVSANVSTARTGNQSALFASDVQEPAASFESTASFAAIPLQPVPRGSGPLNGFMSGPLERGFASGPLDRGGGFMSGPIERGVMSGPLDASDKSNFSAPLARGRRRPRLHRLMRSVSGPMRNTLSRTFSKHTMGSGWMERFFLHPVTRLAWQVKEAKYRSEAQRNCLEGGPSEGEYGNSCNLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRAIDKELEGLLWDYEDKSPTDHPELGHPKCQNAGISVEGTKVDQPELCLNKVSYCNLKESCNSSGMSREQSFTCEIVEESGEVTGCTRNGNITGRGRKSMRLYELLQIESWDGQGSTLISDIGPERKGSSDCQACQDTVGSSENLKGDNSVHRGEDPTTSGGDGRVGLESNQDSMDSLSVSVQRQGTRKSLISSKIRKMYRKQKSLRKKLFPWSYDWHREEPCIDERMVESSGPIRKCKSGIIDHDAVLRAMAQALESTEEAYMEMVEKALDTNPELALMGSCVLVMLMKDQDVYVMNLGDSRAILAQERPNDRHPNPSFLKDDSRHKNRSRESLVRMELDRISEESPMHNQNCQVNMMNKNRDISICRLKMRAVQLSTDHSTSVEEEIIRIKAEHPDDSQAVFNDRVKGQLKVTRAFGAGFLKKMGFTSTSAMRK
ccccccccEEcccccccccccccccccccccccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccEEEcccccccccccccHHHHHHHHccccccccccccccccccEEEccccccccEEEEEEccccEEEEEEEccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccHHHHHHHHHHccccccccccccEEEEccccccHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEEEccEEEEEEcccccEEEcccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccHHHcccccEEEccccccccHHHHHHHHHHccccccccEEcccccccEEEcccccccccccccccccccccc
cccccEEEEEEccccccccccEEEEcccccccccccEEEEcccccccccccccccccEEEcccccccccccccccccccccccccccccccccccEEEEcccEEEccccccccHHHHHHHcccccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHcHHHHHHcHHHHHHHHHHHHHccccccccccEEEEEccccccccccccccccccccccccccccccccccccEEEEcccccccEEEEEEEccccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccEEEEccccccccccccccccccccccccEEEEEcccEEccccccccccccccEEHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccHcHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEccEEEEEEEEcccEEEEEcccccEEEEEEccccccccccEEEcccccccccHHHHHHHHHHHHcccccccccHccEEEEccccccccccccEEEEEEcccccccHHHHHHHHHHHccccccEEEcccEEEEEEEEEHHcHHHcccccccccccccc
mgngtsrvvgcfvpfngksgvdleflepldeglghsfcyvrpsifdspaitpsnserftvdsstldsetlsgsfrhdslddpsglhkpksfpettfktisgasvsanvstartgnqsalfasdvqepaasfestasfaaiplqpvprgsgplngfmsgplergfasgpldrgggfmsgpiergvmsgpldasdksnfsaplargrrrprlhrlmrsvsgpmrntlsrtfskhtmgsgwmerfflhPVTRLAWQVKEAKYRSEAQRncleggpsegeygnscnlqwahgkagedRVHVVLSEEQGWLFIgiydgfsgpdapdfLMSHLYRAIDKELEGLLwdyedksptdhpelghpkcqnagisvegtkvdqpelclnkvsycnlkescnssgmsreqSFTCEIVeesgevtgctrngnitgrgrkSMRLYELLQIEswdgqgstlisdigperkgssdcqacqdtvgssenlkgdnsvhrgedpttsggdgrvglesnqdsmDSLSVSVQRQGTRKSLISSKIRKMYRKQKSLrkklfpwsydwhreepcidermvessgpirkcksgiiDHDAVLRAMAQALESTEEAYMEMVEKALDTNPELALMGSCVLVMLMKDQDVYVMNLGDSRAIlaqerpndrhpnpsflkddsrhknrsrESLVRMELdriseespmhnqncqvnmmnknrdiSICRLKMRAVQlstdhstsVEEEIIRIkaehpddsqavfNDRVKGQLKVTRAFGAGflkkmgftstsamrk
MGNGTSRVVGCFVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFdspaitpsnserftvdsstldsETLSGSFRHDSLDDPSGLHKPKSFPETTFKTISGASVSANVSTARTGNQSALFASDVQEPAASFESTASFAAIPLQPVPRGSGPLNGFMSGPLERGFASGPLDRGGGFMSGPIERGVMSgpldasdksnfsaplargrrrprlhrlmrsvsgpmrntlsrtfsKHTMGSGWMERFFLHPVTRLAWQVKEAKYRSEAQRNCLEGGPSEGEYGNSCNLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRAIDKELEGLLWDYEDKSPTDHPELGHPKCQNAGISVEGTKVDQPELCLNKVSYCNLKESCNSSGMSREQSFTCeiveesgevtgctrngnitgrgrkSMRLYELLQIESWDGQGSTLISDIGPERKGSSDCQACQDTVgssenlkgdnsvhrgedpttsggdgrVGLESNQDSmdslsvsvqrqgtrkslisskirkmyrkqkslrkklfpwsydwhreepcidermvessgpiRKCKSGIIDHDAVLRAMAQALESTEEAYMEMVEKALDTNPELALMGSCVLVMLMKDQDVYVMNLGDSRAILaqerpndrhpnpsflkddsrhknrsreSLVRMeldriseespmhnqncqvnMMNKNRDISICRLKMRAVqlstdhstsVEEEIIRIkaehpddsqavfndRVKGQLKVTRafgagflkkmgftstsamrk
MGNGTSRVVGCFVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFDSPAITPSNSERFTVDSSTLDSETLSGSFRHDSLDDPSGLHKPKSFPETTFKTISGASVSANVSTARTGNQSALFASDVQEPaasfestasfaaIPLQPVPRGSGPLNGFMSGPLERGFASGPLDRGGGFMSGPIERGVMSGPLDASDKSNFSAPlargrrrprlhrlmrSVSGPMRNTLSRTFSKHTMGSGWMERFFLHPVTRLAWQVKEAKYRSEAQRNCLEGGPSEGEYGNSCNLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRAIDKELEGLLWDYEDKSPTDHPELGHPKCQNAGISVEGTKVDQPELCLNKVSYCNLKESCNSSGMSREQSFTCEIVEESGEVTGCTRNGNITGRGRKSMRLYELLQIESWDGQGSTLISDIGPERKGSSDCQACQDTVGSSENLKGDNSVHRGEDPTTSGGDGRVGLESNQDSMDSLSVSVQRQGTRKSLISSKIRKMYRKQKSLRKKLFPWSYDWHREEPCIDERMVESSGPIRKCKSGIIDHDAVLRAMAQALESTEEAYMEMVEKALDTNPELALMGSCVLVMLMKDQDVYVMNLGDSRAILAQERPNDRHPNPSFLKDDSRHKNRSRESLVRMELDRISEESPMHNQNCQVNMMNKNRDISICRLKMRAVQLSTDHSTSVEEEIIRIKAEHPDDSQAVFNDRVKGQLKVTRAFGAGFLKKMGFTSTSAMRK
******RVVGCFVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFD*****************************************************************************************************************************************************************************************HTMGSGWMERFFLHPVTRLAWQVKEAKYR****************YGNSCNLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRAIDKELEGLLWDYE*******************I*VEGTKVDQPELCLNKVSYCNLKE************FTCEIVEESGEVTGCTRNGNITGRGRKSMRLYELLQIESWDGQGSTL***************************************************************************************LRKKLFPWSYDWHREEPCIDERMVESSGPIRKCKSGIIDHDAVLRAMAQALESTEEAYMEMVEKALDTNPELALMGSCVLVMLMKDQDVYVMNLGDSRAI**********************************************************DISICRLKMRAVQL***********IIR***********VFNDRVKGQLKVTRAFGAGFLKKM**********
***GTSRVVGCFVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFDSP*****************************************SFPETTFKTISGASVSANVSTARTGNQSALFASDVQ**********SFAAIPLQ***************************************GV*************************************************************************************************NLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRAIDKELEGLLW*************************************************************************************KSM************************************************************GGDGRV******************************************KLFPWSYDWHREEPCIDERMVESSGPIR**********AVLRAMAQALESTEEAYMEMVEKALDTNPELALMGSCVLVMLMKDQDVYVMNLGDSRAILAQERP*********************************EESPMHNQNCQVNMMNKNRDISICRLKMRAVQLSTDHSTSVEEEIIRIKAEHPDDSQAVFNDRVKGQLKVTRAFGAGFLKKMGFTS******
MGNGTSRVVGCFVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFDSPAITPSNSERFTVDSSTLDSETLSGSFRHDSLDDPSGLHKPKSFPETTFKTISGASVSANVSTARTGNQSALFASDVQEPAASFESTASFAAIPLQPVPRGSGPLNGFMSGPLERGFASGPLDRGGGFMSGPIERGVMSGPLDASDKSNFSAPLARGRRRPRLHRLMRSVSGPMRNTLSRTFSKHTMGSGWMERFFLHPVTRLAWQVKEAKYRSEAQRNCLEGGPSEGEYGNSCNLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRAIDKELEGLLWDYEDKSPTDHPELGHPKCQNAGISVEGTKVDQPELCLNKVSYCNLKES***********FTCEIVEESGEVTGCTRNGNITGRGRKSMRLYELLQIESWDGQGSTLISDIGP***********QDTVGSSENLKGDNSVHRGEDPTTSGGDGRVGLESN******************SLISSKIRKMYRKQKSLRKKLFPWSYDWHREEPCIDERMVESSGPIRKCKSGIIDHDAVLRAMAQALESTEEAYMEMVEKALDTNPELALMGSCVLVMLMKDQDVYVMNLGDSRAILAQERPNDRHPNPSFLK***********SLVRMELDRISEESPMHNQNCQVNMMNKNRDISICRLKMRAVQ*********EEEIIRIKAEHPDDSQAVFNDRVKGQLKVTRAFGAGFLKKMGF********
**NGTSRVVGCFVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFDSPAITPSNSERFTVD*******************************ETTFKTISGASVSANVSTARTGNQSALFASDVQEPAASFESTASFAAIPLQPVPRGSGPL*GFMSGPLE*GFASGPLDRGGGFMSGPIERGVMS*PLD*****NFS************HRLMRSVSGPMRNTLSRTFSKHTMGSGWMERFFLHPVTRLAWQV************************NSCNLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRAIDKELEGLLWDYE*******************************LC*NKVSYCNLKESCNS*******SFTCEIVEESGEVTGCTRNGNITGRGRKSMRLYELLQIESWDG*************************************************************************TRKSLISSKIRKMYRKQKSLRKKLFPWSYDWHREEPCIDERMV***********GIIDHDAVLRAMAQALESTEEAYMEMVEKALDTNPELALMGSCVLVMLMKDQDVYVMNLGDSRAILAQERPNDR**NPSFLK**********ESLVRMELDRISEESPMHNQNCQVNMMNKNRDISICRLKMRAVQLSTDHSTSVEEEIIRIKAEHPDDSQAVFNDRVKGQLKVTRAFGAGFLKKMGF********
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MGNGTSRVVGCFVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFDSPAITPSNSERFTVDSSTLDSETLSGSFRHDSLDDPSGLHKPKSFPETTFKTISGASVSANVSTARTGNQSALFASDVQEPAASFESTASFAAIPLQPVPRGSGPLNGFMSGPLERGFASGPLDRGGGFMSGPIERGVMSGPLDASDKSNFSAPLARGRRRPRLHRLMRSVSGPMRNTLSRTFSKHTMGSGWMERFFLHPVTRLAWQVKEAKYRSEAQRNCLEGGPSEGEYGNSCNLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRAIDKELEGLLWDYEDKSPTDHPELGHPKCQNAGISVEGTKVDQPELCLNKVSYCNLKESCNSSGMSREQSFTCEIVEESGEVTGCTRNGNITGRGRKSMRLYELLQIESWDGQGSTLISDIGPERKGSSDCQACQDTVGSSENLKGDNSVHRGEDPTTSGGDGRVGLESNQDSMDSLSVSVQRQGTRKSLISSKIRKMYRKQKSLRKKLFPWSYDWHREEPCIDERMVESSGPIRKCKSGIIDHDAVLRAMAQALESTEEAYMEMVEKALDTNPELALMGSCVLVMLMKDQDVYVMNLGDSRAILAQERPNDRHPNPSFLKDDSRHKNRSRESLVRMELDRISEESPMHNQNCQVNMMNKNRDISICRLKMRAVQLSTDHSTSVEEEIIRIKAEHPDDSQAVFNDRVKGQLKVTRAFGAGFLKKMGFTSTSAMRK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query764 2.2.26 [Sep-21-2011]
Q8RWN7 856 Protein phosphatase 2C 32 yes no 0.922 0.823 0.647 0.0
Q9LQN6662 Probable protein phosphat no no 0.403 0.465 0.401 8e-58
Q9ZV25654 Probable protein phosphat no no 0.380 0.444 0.428 3e-57
O82302 783 Protein phosphatase 2C 29 no no 0.298 0.291 0.442 1e-47
Q9LZ86674 Probable protein phosphat no no 0.333 0.378 0.384 1e-45
Q84T94639 Protein phosphatase 2C 35 no no 0.327 0.391 0.381 8e-42
Q6ZGY0 596 Probable protein phosphat no no 0.208 0.266 0.470 6e-38
Q9SR24650 Probable protein phosphat no no 0.380 0.447 0.337 1e-37
A3AZ89 593 Putative protein phosphat no no 0.212 0.273 0.440 6e-29
Q10NB9631 Probable protein phosphat no no 0.352 0.426 0.323 4e-27
>sp|Q8RWN7|P2C32_ARATH Protein phosphatase 2C 32 OS=Arabidopsis thaliana GN=POL PE=1 SV=2 Back     alignment and function desciption
 Score =  957 bits (2473), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 500/772 (64%), Positives = 588/772 (76%), Gaps = 67/772 (8%)

Query: 1   MGNGTSRVVGCFVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFDSPAITPSNSERFTV 60
           MGNGTSRVVGCFVP N K+GVDLEFLEPLDEGLGHSFCYVRPSIF+SP ITPSNSERFT+
Sbjct: 1   MGNGTSRVVGCFVPSNDKNGVDLEFLEPLDEGLGHSFCYVRPSIFESPDITPSNSERFTI 60

Query: 61  DSSTLDSETLSGSFRHDSLDDPSGL--HKPKSFPETTFKTISGASVSANVSTARTGNQSA 118
           DSST+DSETL+GSFR+D +DDPS L  H  K   ETTFK ISGASVSANVSTARTGNQ A
Sbjct: 61  DSSTIDSETLTGSFRNDIVDDPSFLNRHNSKGLAETTFKAISGASVSANVSTARTGNQMA 120

Query: 119 LFASDVQEPAASFESTASFAAIPLQPVPRG-SGPLNGFMSGPLERGFASGPLDRGGGFMS 177
           L +SDV EPAASFEST+SFA+IPLQP+PRG SGPLNGFMSGPLERGFASGPLDR  GFMS
Sbjct: 121 LCSSDVLEPAASFESTSSFASIPLQPLPRGGSGPLNGFMSGPLERGFASGPLDRNNGFMS 180

Query: 178 GPIERGVMSGPLDASDKSNFSAPLARGRRRPRLHRLMRSVSGPMRNTLSRTFSKHTMGSG 237
           GPIE+GVMSGPLD SD+SNFSAPL+  R++PR  R MRSVSGPM++TL+RTFS+ + G  
Sbjct: 181 GPIEKGVMSGPLDVSDRSNFSAPLSFRRKKPRFQRFMRSVSGPMKSTLARTFSRRSGGLS 240

Query: 238 WMERFFLHPVTRLAWQV-KEAKYRSEAQRNCLEGGPSEGEYGNSCNLQWAHGKAGEDRVH 296
           WM RFFLHP TR++W V K+ K   E   +CLE         ++ NLQWAHGKAGEDRVH
Sbjct: 241 WMHRFFLHPETRVSWAVGKDGKLHGEDPESCLE---------SNRNLQWAHGKAGEDRVH 291

Query: 297 VVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRAIDKELEGLLWDYEDKS------PTDH 350
           VVLSEEQGWLFIGIYDGFSGPDAPDF+MSHLY+AIDKELEGLLWDYE+ S      P   
Sbjct: 292 VVLSEEQGWLFIGIYDGFSGPDAPDFVMSHLYKAIDKELEGLLWDYEEPSEDNQLQPDQE 351

Query: 351 PELGHPKCQNAGISVEGTK---VDQPELCLNKVSYCNLKESCNSSGMSREQSFTCEIVEE 407
           P      C    IS + +K    +  E+ ++ +S     ++  + G              
Sbjct: 352 PPTEENMCDPESISEQHSKSVVAESEEVMIDDISSLGNTDTQIADGPP------------ 399

Query: 408 SGEVTGCTRNGNITGRGRKSMRLYELLQIESWDGQGSTLISDIGPERKGSSDCQACQDTV 467
                     G+  G G+KSMRLYELLQ+E W+G+      +IG +R G           
Sbjct: 400 ----------GDSAGPGKKSMRLYELLQLEQWEGE------EIGLKRYGG---------- 433

Query: 468 GSSENLKGDNSVHRGEDPTTSGGD-GRVGLESNQDSMDSLSVSVQRQGTRKSLISSKIRK 526
               N+  +N  ++ E+P+TSGG  G     +++ ++D +  S QR GT+KS ISSKIR+
Sbjct: 434 ----NVALNNMTNQVENPSTSGGGAGNDPCTTDRSALDGIPNSGQRHGTKKSQISSKIRR 489

Query: 527 MYRKQKSLRKKLFPWSYDWHREE-PCIDERMVESSGPIRKCKSGIIDHDAVLRAMAQALE 585
           MY+KQKSLRKKLFPWSYDWHREE  C++E++VESSGPIR+  SG +DHDAVLRAMA+ALE
Sbjct: 490 MYQKQKSLRKKLFPWSYDWHREEGICVEEKIVESSGPIRRRWSGTVDHDAVLRAMARALE 549

Query: 586 STEEAYMEMVEKALDTNPELALMGSCVLVMLMKDQDVYVMNLGDSRAILAQERPNDRHPN 645
           STEEAYM+MVEK+LD NPELALMGSCVLVMLMKDQDVYVMN+GDSRAILAQER +DRH N
Sbjct: 550 STEEAYMDMVEKSLDINPELALMGSCVLVMLMKDQDVYVMNVGDSRAILAQERLHDRHSN 609

Query: 646 PSFLKDDSR-HKNRSRESLVRMELDRISEESPMHNQNCQVNMMNKNRDISICRLKMRAVQ 704
           P F  D+   HK+RSRESLVR+ELDRISEESP+HNQ   +++ NKNRD++  RLKMRAVQ
Sbjct: 610 PGFGNDEGIGHKSRSRESLVRIELDRISEESPIHNQATPISVSNKNRDVTSYRLKMRAVQ 669

Query: 705 LSTDHSTSVEEEIIRIKAEHPDDSQAVFNDRVKGQLKVTRAFGAGFLKKMGF 756
           LS+DHSTSVEEEI RI++EHP+D Q++  DRVKGQLKVTRAFGAGFLKK  F
Sbjct: 670 LSSDHSTSVEEEIWRIRSEHPEDDQSILKDRVKGQLKVTRAFGAGFLKKPNF 721
Involved in the regulation of pedicel length and of CLAVATA pathways controlling stem cell identity at shoot and flower meristems.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q9LQN6|P2C04_ARATH Probable protein phosphatase 2C 4 OS=Arabidopsis thaliana GN=PLL5 PE=1 SV=1 Back     alignment and function description
>sp|Q9ZV25|P2C23_ARATH Probable protein phosphatase 2C 23 OS=Arabidopsis thaliana GN=PLL4 PE=2 SV=1 Back     alignment and function description
>sp|O82302|P2C29_ARATH Protein phosphatase 2C 29 OS=Arabidopsis thaliana GN=PLL1 PE=1 SV=2 Back     alignment and function description
>sp|Q9LZ86|P2C66_ARATH Probable protein phosphatase 2C 66 OS=Arabidopsis thaliana GN=PLL2 PE=2 SV=1 Back     alignment and function description
>sp|Q84T94|P2C35_ORYSJ Protein phosphatase 2C 35 OS=Oryza sativa subsp. japonica GN=XB15 PE=1 SV=1 Back     alignment and function description
>sp|Q6ZGY0|P2C26_ORYSJ Probable protein phosphatase 2C 26 OS=Oryza sativa subsp. japonica GN=Os02g0690500 PE=2 SV=1 Back     alignment and function description
>sp|Q9SR24|P2C36_ARATH Probable protein phosphatase 2C 36 OS=Arabidopsis thaliana GN=PLL3 PE=2 SV=1 Back     alignment and function description
>sp|A3AZ89|P2C46_ORYSJ Putative protein phosphatase 2C 46 OS=Oryza sativa subsp. japonica GN=Os05g0111800 PE=3 SV=2 Back     alignment and function description
>sp|Q10NB9|P2C31_ORYSJ Probable protein phosphatase 2C 31 OS=Oryza sativa subsp. japonica GN=Os03g0275100 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query764
225437734 910 PREDICTED: protein phosphatase 2C 32-lik 0.982 0.825 0.745 0.0
255548189 907 protein phosphatase 2c, putative [Ricinu 0.979 0.824 0.749 0.0
224068295 882 predicted protein [Populus trichocarpa] 0.965 0.836 0.759 0.0
147855258 871 hypothetical protein VITISV_031357 [Viti 0.948 0.832 0.733 0.0
224130784854 predicted protein [Populus trichocarpa] 0.948 0.848 0.753 0.0
356572864 887 PREDICTED: protein phosphatase 2C 32-lik 0.965 0.832 0.698 0.0
356505703849 PREDICTED: protein phosphatase 2C 32-lik 0.943 0.849 0.712 0.0
3522957814 unknown protein [Arabidopsis thaliana] g 0.922 0.866 0.647 0.0
20260146856 unknown protein [Arabidopsis thaliana] 0.922 0.823 0.647 0.0
30690550856 membrane associated protein phosphatase 0.922 0.823 0.647 0.0
>gi|225437734|ref|XP_002280642.1| PREDICTED: protein phosphatase 2C 32-like [Vitis vinifera] Back     alignment and taxonomy information
 Score = 1173 bits (3034), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 586/786 (74%), Positives = 649/786 (82%), Gaps = 35/786 (4%)

Query: 1   MGNGTSRVVGCFVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFDSPAITPSNSERFTV 60
           MGN TSRVVGCFVPFNGK GVDL+ LEPLDEGLGHSFCYVRP I DSPAITPSNSERFTV
Sbjct: 1   MGNSTSRVVGCFVPFNGKGGVDLDLLEPLDEGLGHSFCYVRPMILDSPAITPSNSERFTV 60

Query: 61  DSSTLDSETLSGSFRHDSLDDPSGLHKP-KSFPETTFKTISGASVSANVSTARTGNQSAL 119
           DSSTLDSETLSGSFRH+++DDPS +H+P K FPETTFK ISGASVSANVSTARTGN +AL
Sbjct: 61  DSSTLDSETLSGSFRHENIDDPSAVHRPNKCFPETTFKAISGASVSANVSTARTGNSNAL 120

Query: 120 FASDVQEPAASFESTASFAAIPLQPVPRGSGPLNGFMSGPLERGFASGPLDRGGGFMSGP 179
           F SD QEPAASFEST+SFAAIPLQPVPRGSGPLNGFMSGPLERGFASGPL+RGGGFMSGP
Sbjct: 121 FTSDAQEPAASFESTSSFAAIPLQPVPRGSGPLNGFMSGPLERGFASGPLERGGGFMSGP 180

Query: 180 IERGVMSGPLDASDKSNFSAPLARGRRRPRLHRLMRSVSGPMRNTLSRTFSKHTMGSGWM 239
           IE+GVMSGPLDA+DKSNFSAPLA GRRRP L RLMRSVSGPM++TLSRTFS+H++GS WM
Sbjct: 181 IEKGVMSGPLDATDKSNFSAPLAHGRRRPGLQRLMRSVSGPMKSTLSRTFSRHSIGSSWM 240

Query: 240 ERFFLHPVTRLAWQVKEAKYRSEAQRNCLEGGPSEGEYGNSCNLQWAHGKAGEDRVHVVL 299
           +RFFLHPVT+ AW  +E K+R EA RNCL+ GPSEGEY  + NLQWAHGKAGEDRVHVVL
Sbjct: 241 QRFFLHPVTQFAWHPREPKFRPEAPRNCLDVGPSEGEYRKTHNLQWAHGKAGEDRVHVVL 300

Query: 300 SEEQGWLFIGIYDGFSGPDAPDFLMSHLYRAIDKELEGLLWDYEDKSPTDHPELGHPKCQ 359
           SEEQGWLFIGIYDGFSGPDAPDFLMSHLY+AIDKELEGLLWDYE+KS  D   L  P  +
Sbjct: 301 SEEQGWLFIGIYDGFSGPDAPDFLMSHLYKAIDKELEGLLWDYEEKSVNDLLNLELPMNR 360

Query: 360 NAGISVEGTKVDQPELCLNKVSYCNLKESCNSSGMSREQSFTCEIVEESGEVTG------ 413
           +A +  E  K + P   LN+V    L+ESCN  G  R+    CEIVEE   V G      
Sbjct: 361 DATVDSECGKDNHPISQLNEVISGTLEESCN-PGTIRDHCSNCEIVEEKDGVRGVLELQS 419

Query: 414 -CTRNG------------NITGRGRKSMRLYELLQIESWDGQGSTLISDIGPERKGSSDC 460
            C + G            N+TG+GRKS RLYELLQ+ESWDG+ S  +S+ G +R+GS D 
Sbjct: 420 SCGKPGVLGVESIAAPTANLTGQGRKSKRLYELLQMESWDGESSLSVSEGGNQRRGSWDW 479

Query: 461 QACQDTVGSSENL-------------KGDNSVHRGEDPTTSGGDGRVGLESNQDSMDSLS 507
           Q   D + S   L             KGD+S    EDPTTSG +G + +ESN   +  LS
Sbjct: 480 QPSSDVLHSRGILQEEQLRSCSVTSTKGDSSSQYCEDPTTSGENGGIRMESNS-VLAPLS 538

Query: 508 VSVQRQGTRKSLISSKIRKMYRKQKSLRKKLFPWSYDWHREEPCIDERMVESSGPIRKCK 567
           VS QRQG RKSLISSKIRKMYRKQKSLRKKLFPWSYDWHREE C+D+RM E+SGP+R+CK
Sbjct: 539 VSEQRQGMRKSLISSKIRKMYRKQKSLRKKLFPWSYDWHREETCVDDRMAETSGPVRRCK 598

Query: 568 SGIIDHDAVLRAMAQALESTEEAYMEMVEKALDTNPELALMGSCVLVMLMKDQDVYVMNL 627
           SG+IDHDAVLRAMA+ALE+TEEAYMEMVEKALD NPELALMGSCVLVMLMKDQDVYVMNL
Sbjct: 599 SGVIDHDAVLRAMARALETTEEAYMEMVEKALDKNPELALMGSCVLVMLMKDQDVYVMNL 658

Query: 628 GDSRAILAQERPNDRHPNPSFLKDDSRHKNRSRESLVRMELDRISEESPMHNQNCQVNMM 687
           GDSR ILAQERPNDRHPNP+  KDD RH+NRSRESLVRMELDRISEESPMHNQNCQVN  
Sbjct: 659 GDSRVILAQERPNDRHPNPNLAKDDVRHRNRSRESLVRMELDRISEESPMHNQNCQVNKA 718

Query: 688 NKNRDISICRLKMRAVQLSTDHSTSVEEEIIRIKAEHPDDSQAVFNDRVKGQLKVTRAFG 747
           NKNR+IS CRLKMRAVQLSTDHSTS+EEE++RIKAEH DD+QA+ NDRVKGQLKVTRAFG
Sbjct: 719 NKNREISFCRLKMRAVQLSTDHSTSIEEEVLRIKAEHVDDNQAILNDRVKGQLKVTRAFG 778

Query: 748 AGFLKK 753
           AGFLK+
Sbjct: 779 AGFLKE 784

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255548189|ref|XP_002515151.1| protein phosphatase 2c, putative [Ricinus communis] gi|223545631|gb|EEF47135.1| protein phosphatase 2c, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224068295|ref|XP_002302697.1| predicted protein [Populus trichocarpa] gi|222844423|gb|EEE81970.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|147855258|emb|CAN83867.1| hypothetical protein VITISV_031357 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224130784|ref|XP_002320925.1| predicted protein [Populus trichocarpa] gi|222861698|gb|EEE99240.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356572864|ref|XP_003554585.1| PREDICTED: protein phosphatase 2C 32-like [Glycine max] Back     alignment and taxonomy information
>gi|356505703|ref|XP_003521629.1| PREDICTED: protein phosphatase 2C 32-like [Glycine max] Back     alignment and taxonomy information
>gi|3522957|gb|AAC34239.1| unknown protein [Arabidopsis thaliana] gi|227202644|dbj|BAH56795.1| AT2G46920 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|20260146|gb|AAM12971.1| unknown protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|30690550|ref|NP_850463.1| membrane associated protein phosphatase 2C [Arabidopsis thaliana] gi|30690552|ref|NP_850464.1| membrane associated protein phosphatase 2C [Arabidopsis thaliana] gi|332278134|sp|Q8RWN7.2|P2C32_ARATH RecName: Full=Protein phosphatase 2C 32; Short=AtPP2C32; AltName: Full=Protein POLTERGEIST; AltName: Full=Protein phosphatase 2C POL; Short=PP2C POL gi|330255678|gb|AEC10772.1| membrane associated protein phosphatase 2C [Arabidopsis thaliana] gi|330255679|gb|AEC10773.1| membrane associated protein phosphatase 2C [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query764
TAIR|locus:2041444856 POL "poltergeist" [Arabidopsis 0.486 0.434 0.659 2.1e-237
TAIR|locus:2026605662 PLL5 "pol-like 5" [Arabidopsis 0.373 0.430 0.398 1.2e-87
TAIR|locus:2053265654 PLL4 "poltergeist like 4" [Ara 0.350 0.409 0.414 3.8e-81
TAIR|locus:2062481 783 PLL1 "poltergeist like 1" [Ara 0.336 0.328 0.420 1.5e-73
TAIR|locus:2083539650 PLL3 "pol-like 3" [Arabidopsis 0.312 0.367 0.361 4.5e-69
TAIR|locus:2180152674 PLL2 "pol-like 2" [Arabidopsis 0.435 0.494 0.340 6.8e-55
TAIR|locus:2089293493 AT3G16560 [Arabidopsis thalian 0.077 0.119 0.559 2e-19
TAIR|locus:2118899380 AT4G33920 [Arabidopsis thalian 0.069 0.139 0.452 1.5e-14
TAIR|locus:2081770379 AT3G51370 [Arabidopsis thalian 0.071 0.145 0.418 1.2e-12
TAIR|locus:2151256370 AT5G02760 [Arabidopsis thalian 0.079 0.164 0.370 3.2e-11
TAIR|locus:2041444 POL "poltergeist" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1291 (459.5 bits), Expect = 2.1e-237, Sum P(2) = 2.1e-237
 Identities = 260/394 (65%), Positives = 292/394 (74%)

Query:     1 MGNGTSRVVGCFVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFDSPAITPSNSERFTV 60
             MGNGTSRVVGCFVP N K+GVDLEFLEPLDEGLGHSFCYVRPSIF+SP ITPSNSERFT+
Sbjct:     1 MGNGTSRVVGCFVPSNDKNGVDLEFLEPLDEGLGHSFCYVRPSIFESPDITPSNSERFTI 60

Query:    61 DSSTLDSETLSGSFRHDSLDDPSGL--HKPKSFPETTFKTISGASVSANVSTARTGNQSA 118
             DSST+DSETL+GSFR+D +DDPS L  H  K   ETTFK ISGASVSANVSTARTGNQ A
Sbjct:    61 DSSTIDSETLTGSFRNDIVDDPSFLNRHNSKGLAETTFKAISGASVSANVSTARTGNQMA 120

Query:   119 LFASDVQEPXXXXXXXXXXXXIPLQPVPRG-SGPLNGFMSGPLERGFASGPLDRGGGFMS 177
             L +SDV EP            IPLQP+PRG SGPLNGFMSGPLERGFASGPLDR  GFMS
Sbjct:   121 LCSSDVLEPAASFESTSSFASIPLQPLPRGGSGPLNGFMSGPLERGFASGPLDRNNGFMS 180

Query:   178 GPIERGVMSGPLDASDKSNFSAPXXXXXXXXXXXXXXXSVSGPMRNTLSRTFSKHTMGSG 237
             GPIE+GVMSGPLD SD+SNFSAP               SVSGPM++TL+RTFS+ + G  
Sbjct:   181 GPIEKGVMSGPLDVSDRSNFSAPLSFRRKKPRFQRFMRSVSGPMKSTLARTFSRRSGGLS 240

Query:   238 WMERFFLHPVTRLAWQV-KEAKYRSEAQRNCLEGGPSEGEYGNSCNLQWAHGKAGEDRVH 296
             WM RFFLHP TR++W V K+ K   E   +CLE         ++ NLQWAHGKAGEDRVH
Sbjct:   241 WMHRFFLHPETRVSWAVGKDGKLHGEDPESCLE---------SNRNLQWAHGKAGEDRVH 291

Query:   297 VVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRAIDKELEGLLWDYEDKS------PTDH 350
             VVLSEEQGWLFIGIYDGFSGPDAPDF+MSHLY+AIDKELEGLLWDYE+ S      P   
Sbjct:   292 VVLSEEQGWLFIGIYDGFSGPDAPDFVMSHLYKAIDKELEGLLWDYEEPSEDNQLQPDQE 351

Query:   351 PELGHPKCQNAGISVEGTK---VDQPELCLNKVS 381
             P      C    IS + +K    +  E+ ++ +S
Sbjct:   352 PPTEENMCDPESISEQHSKSVVAESEEVMIDDIS 385
GO:0003824 "catalytic activity" evidence=IEA
GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS;IDA
GO:0005634 "nucleus" evidence=ISM;NAS
GO:0009934 "regulation of meristem structural organization" evidence=IGI
GO:0005886 "plasma membrane" evidence=IDA
GO:0006355 "regulation of transcription, DNA-dependent" evidence=IGI;RCA
GO:0010074 "maintenance of meristem identity" evidence=IGI;RCA
GO:0005543 "phospholipid binding" evidence=IDA
GO:0000226 "microtubule cytoskeleton organization" evidence=RCA
GO:0000911 "cytokinesis by cell plate formation" evidence=RCA
GO:0006406 "mRNA export from nucleus" evidence=RCA
GO:0007155 "cell adhesion" evidence=RCA
GO:0009909 "regulation of flower development" evidence=RCA
GO:0010090 "trichome morphogenesis" evidence=RCA
GO:0043687 "post-translational protein modification" evidence=RCA
GO:0045010 "actin nucleation" evidence=RCA
GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA
GO:0048765 "root hair cell differentiation" evidence=RCA
GO:0071555 "cell wall organization" evidence=RCA
TAIR|locus:2026605 PLL5 "pol-like 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2053265 PLL4 "poltergeist like 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2062481 PLL1 "poltergeist like 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2083539 PLL3 "pol-like 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2180152 PLL2 "pol-like 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2089293 AT3G16560 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2118899 AT4G33920 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2081770 AT3G51370 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2151256 AT5G02760 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8RWN7P2C32_ARATH3, ., 1, ., 3, ., 1, 60.64760.92270.8235yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3.160.946
3rd Layer3.1.30.963

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pm.C_LG_II0836
hypothetical protein (882 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query764
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 7e-15
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 3e-09
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 1e-06
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 7e-06
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 5e-05
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 6e-04
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information 
 Score = 75.1 bits (185), Expect = 7e-15
 Identities = 42/183 (22%), Positives = 58/183 (31%), Gaps = 70/183 (38%)

Query: 572 DHDAVLRAMAQALESTEEAYMEMVEKALDTNPELALMGSCVLVMLMKDQDVYVMNLGDSR 631
             + +  A+ +A    +E  +E         P+ A  G+  +V L++   +YV N+G   
Sbjct: 67  SEEDIEEALRKAFLRADEEILEE----AQDEPDDARSGTTAVVALIRGNKLYVANVG--- 119

Query: 632 AILAQERPNDRHPNPSFLKDDSRHKNRSRESLVRMELDRISEESPMHNQNCQVNMMNKNR 691
                               DSR                                     
Sbjct: 120 --------------------DSR------------------------------------- 122

Query: 692 DISICRLKMRAVQLSTDHSTSVEEEIIRIKAEHPDDSQAVFNDRVKGQLKVTRAFGAGFL 751
              +CR    AVQL+ DH    EEE  RI+         V N RV G L VTRA G   L
Sbjct: 123 -AVLCR-NGEAVQLTKDHKPVNEEERERIEKAG----GRVSNGRVPGVLAVTRALGDFDL 176

Query: 752 KKM 754
           K  
Sbjct: 177 KPG 179

Length = 254
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 764
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 100.0
KOG0698330 consensus Serine/threonine protein phosphatase [Si 99.92
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 99.9
PLN03145 365 Protein phosphatase 2c; Provisional 99.88
PTZ00224 381 protein phosphatase 2C; Provisional 99.8
KOG0697 379 consensus Protein phosphatase 1B (formerly 2C) [Si 99.66
KOG0699 542 consensus Serine/threonine protein phosphatase [Si 99.61
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 99.49
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 99.45
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 99.42
KOG1323493 consensus Serine/threonine phosphatase [Signal tra 99.24
PRK14559645 putative protein serine/threonine phosphatase; Pro 99.21
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 97.24
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 96.84
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 95.08
KOG1379330 consensus Serine/threonine protein phosphatase [Si 91.89
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information 
Probab=100.00  E-value=1.5e-61  Score=517.42  Aligned_cols=133  Identities=54%  Similarity=0.825  Sum_probs=123.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccCCceEEEEEEECCeEEEEEcCCccEEEEecCCCCCCCCCCCcccc
Q 004274          573 HDAVLRAMAQALESTEEAYMEMVEKALDTNPELALMGSCVLVMLMKDQDVYVMNLGDSRAILAQERPNDRHPNPSFLKDD  652 (764)
Q Consensus       573 h~~VlrAL~rAf~~TEeafLe~~dk~l~enpeLalmGSTALVaLIkg~dVYVANVGDSRAVLar~~~~~~~pn~~~gk~~  652 (764)
                      |.+|++||.+||++||++|++++++++..+|++++|||||+|++|++.+|||||+|||||||++...++           
T Consensus       166 ~~~v~~al~~Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~-----------  234 (390)
T KOG0700|consen  166 HGDVLEALSKAFEATEEDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNG-----------  234 (390)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceecCCC-----------
Confidence            678999999999999999999999999999999999999999999999999999999999998876211           


Q ss_pred             ccccccchhhhhhhhhhcccccCcccccchhhhccccccchhhhcccceeeecCCCCCCCcHHHHHHHHHcCCCCCCcee
Q 004274          653 SRHKNRSRESLVRMELDRISEESPMHNQNCQVNMMNKNRDISICRLKMRAVQLSTDHSTSVEEEIIRIKAEHPDDSQAVF  732 (764)
Q Consensus       653 l~~r~~S~~~~~~~~Leri~eeSp~~~~~~e~~~~nk~~e~~~~~~~l~AlQLT~DHSps~eeEr~RIkaehPDd~~~I~  732 (764)
                                                                   ..|.|+|||+||++++++|++||+++||||+.+|+
T Consensus       235 ---------------------------------------------~~~~A~qLS~dHn~~ne~Ev~Rir~eHPdd~~~vv  269 (390)
T KOG0700|consen  235 ---------------------------------------------SWLVAVQLSTDHNASNEDEVRRIRSEHPDDPHIVV  269 (390)
T ss_pred             ---------------------------------------------CeEEEEecChhhccccHHHHHHHHHhCCCCcceEe
Confidence                                                         12689999999999999999999999999999999


Q ss_pred             cC--cccCccccccccccCcccccCccccCc
Q 004274          733 ND--RVKGQLKVTRAFGAGFLKKMGFTSTSA  761 (764)
Q Consensus       733 ng--RVkG~LaVTRAFGDg~LKqPkvn~ap~  761 (764)
                      ++  ||||.|+|||||||++||+|++|..|.
T Consensus       270 ~~~~RvkG~L~vsRAfGd~~lK~~~~n~e~l  300 (390)
T KOG0700|consen  270 NKHWRVKGILQVSRAFGDGYLKWPEFNQEPL  300 (390)
T ss_pred             eccceeeEEEEeeeeccceeecchhhccchh
Confidence            87  999999999999999999999995443

>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query764
2pnq_A 467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 1e-12
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 4e-07
2j4o_A 401 Mitogen-activated protein kinase kinase kinase 7-i 1e-09
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 2e-04
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 1e-06
1a6q_A 382 Phosphatase 2C; catalytic mechanism, metalloenzyme 8e-06
1a6q_A 382 Phosphatase 2C; catalytic mechanism, metalloenzyme 2e-04
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 9e-06
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 4e-04
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 1e-05
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 1e-04
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 1e-05
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 2e-04
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 2e-05
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 7e-04
3kdj_B 316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 4e-05
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 1e-04
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 5e-05
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 8e-04
2isn_A 364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 9e-05
3d8k_A 377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 1e-04
2irm_A 358 Mitogen-activated protein kinase kinase kinase 7 i 2e-04
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 4e-04
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
 Score = 69.4 bits (169), Expect = 1e-12
 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 2/57 (3%)

Query: 699 KMRAVQLSTDHSTSVEEEIIRIKAEHPDDSQAVF--NDRVKGQLKVTRAFGAGFLKK 753
              AV LS DH+   E E+ R+K EHP +        DR+ G L   RAFG    K 
Sbjct: 233 SWSAVTLSNDHNAQNERELQRLKLEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKW 289
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query764
2pnq_A 467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 99.94
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 99.89
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 99.88
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 99.88
2j4o_A 401 Mitogen-activated protein kinase kinase kinase 7-i 99.87
1a6q_A 382 Phosphatase 2C; catalytic mechanism, metalloenzyme 99.86
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 99.86
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 99.84
3kdj_B 316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 99.82
3d8k_A 377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 99.82
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 99.81
2isn_A 364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 99.79
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 99.78
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 99.53
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 99.52
3rnr_A211 Stage II sporulation E family protein; structural 99.29
1txo_A237 Putative bacterial enzyme; serine/threonine protei 99.27
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 99.2
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 95.19
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 93.5
3f79_A255 Probable two-component response regulator; adaptor 86.53
1txo_A237 Putative bacterial enzyme; serine/threonine protei 81.11
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
Probab=99.94  E-value=2.6e-27  Score=259.42  Aligned_cols=122  Identities=31%  Similarity=0.363  Sum_probs=102.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH------hccCcccccCCceEEEEEEECCeEEEEEcCCccEEEEecCCCCCCCCCCC
Q 004274          575 AVLRAMAQALESTEEAYMEMVEKA------LDTNPELALMGSCVLVMLMKDQDVYVMNLGDSRAILAQERPNDRHPNPSF  648 (764)
Q Consensus       575 ~VlrAL~rAf~~TEeafLe~~dk~------l~enpeLalmGSTALVaLIkg~dVYVANVGDSRAVLar~~~~~~~pn~~~  648 (764)
                      ++.+||.+||.+++++|++.+...      ....++...|||||+|+||.++.+||||||||||||++...+        
T Consensus       160 ~~~~aL~~af~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~GtTa~v~li~~~~l~vAnvGDSRa~l~r~~~~--------  231 (467)
T 2pnq_A          160 DVKEALINAFKRLDNDISLEAQVGDPNSFLNYLVLRVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEED--------  231 (467)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHSEECEEEEEEETTEEEEEEESSCEEEEEEECTT--------
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhhcccccccccccccCCCCcceEEEEEEECCEEEEEECCCceEEEEEecCC--------
Confidence            478899999999999998775320      111345567999999999999999999999999999986410        


Q ss_pred             ccccccccccchhhhhhhhhhcccccCcccccchhhhccccccchhhhcccceeeecCCCCCCCcHHHHHHHHHcCCCCC
Q 004274          649 LKDDSRHKNRSRESLVRMELDRISEESPMHNQNCQVNMMNKNRDISICRLKMRAVQLSTDHSTSVEEEIIRIKAEHPDDS  728 (764)
Q Consensus       649 gk~~l~~r~~S~~~~~~~~Leri~eeSp~~~~~~e~~~~nk~~e~~~~~~~l~AlQLT~DHSps~eeEr~RIkaehPDd~  728 (764)
                                                                       ..|.+.|||.||++.+++|++||.++||...
T Consensus       232 -------------------------------------------------g~~~~~~LT~DH~~~~~~E~~Ri~~~g~~~~  262 (467)
T 2pnq_A          232 -------------------------------------------------GSWSAVTLSNDHNAQNERELQRLKLEHPKNE  262 (467)
T ss_dssp             -------------------------------------------------SCEEEEECCCCCSTTCHHHHHHHHHTSCGGG
T ss_pred             -------------------------------------------------CcEEEEECCCCCCCCCHHHHHHHHHcCCCcc
Confidence                                                             0357899999999999999999999998653


Q ss_pred             --CceecCcccCccccccccccCcccc
Q 004274          729 --QAVFNDRVKGQLKVTRAFGAGFLKK  753 (764)
Q Consensus       729 --~~I~ngRVkG~LaVTRAFGDg~LKq  753 (764)
                        .++.++||+|.|+|||||||.+||+
T Consensus       263 ~~~~~~~~Rv~G~l~vtRAlGd~~~K~  289 (467)
T 2pnq_A          263 AKSVVKQDRLLGLLMPFRAFGDVKFKW  289 (467)
T ss_dssp             HHHHBSSSSBTTTBSSSBCEECGGGTS
T ss_pred             cceeEecCccccccccchhcCchhhcc
Confidence              3556789999999999999999985
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query764
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 99.93
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 99.25
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.7e-25  Score=226.68  Aligned_cols=119  Identities=27%  Similarity=0.348  Sum_probs=104.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhccCcccccCCceEEEEEEECCeEEEEEcCCccEEEEecCCCCCCCCCCCcccccc
Q 004274          575 AVLRAMAQALESTEEAYMEMVEKALDTNPELALMGSCVLVMLMKDQDVYVMNLGDSRAILAQERPNDRHPNPSFLKDDSR  654 (764)
Q Consensus       575 ~VlrAL~rAf~~TEeafLe~~dk~l~enpeLalmGSTALVaLIkg~dVYVANVGDSRAVLar~~~~~~~pn~~~gk~~l~  654 (764)
                      .+.+||.+||.++++.+..+.+    ..+....||||+++++|.++++||||||||||||++.+                
T Consensus        95 ~~~~al~~a~~~~~~~~~~~~~----~~~~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~~~----------------  154 (295)
T d1a6qa2          95 NVKNGIRTGFLEIDEHMRVMSE----KKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNR----------------  154 (295)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH----HTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETT----------------
T ss_pred             HHHHHHHHHHHHHHHHHhhhhh----hccCcCCCCCeEEEEEeeCCEEEEEecCCCeEEEeecc----------------
Confidence            5778999999999999877643    34556679999999999999999999999999999865                


Q ss_pred             ccccchhhhhhhhhhcccccCcccccchhhhccccccchhhhcccceeeecCCCCCCCcHHHHHHHHHcCCCCCCceecC
Q 004274          655 HKNRSRESLVRMELDRISEESPMHNQNCQVNMMNKNRDISICRLKMRAVQLSTDHSTSVEEEIIRIKAEHPDDSQAVFND  734 (764)
Q Consensus       655 ~r~~S~~~~~~~~Leri~eeSp~~~~~~e~~~~nk~~e~~~~~~~l~AlQLT~DHSps~eeEr~RIkaehPDd~~~I~ng  734 (764)
                                                                    .+.+||.||++.++.|++||.+.|    +.|...
T Consensus       155 ----------------------------------------------~~~~lT~dH~~~~~~E~~Ri~~~g----g~v~~~  184 (295)
T d1a6qa2         155 ----------------------------------------------KVHFFTQDHKPSNPLEKERIQNAG----GSVMIQ  184 (295)
T ss_dssp             ----------------------------------------------EEEEECCCCCTTSHHHHHHHHHTT----CCEETT
T ss_pred             ----------------------------------------------cceeeccccCcccHHHHhhHhhcC----Cccccc
Confidence                                                          578999999999999999999999    788889


Q ss_pred             cccCccccccccccCcccccC--------ccccCccc
Q 004274          735 RVKGQLKVTRAFGAGFLKKMG--------FTSTSAMR  763 (764)
Q Consensus       735 RVkG~LaVTRAFGDg~LKqPk--------vn~ap~vr  763 (764)
                      |+.|.|.|||||||..+|...        +...|+|+
T Consensus       185 r~~g~l~~tRa~Gd~~~k~~~~~~~~~~~v~~~Pdi~  221 (295)
T d1a6qa2         185 RVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVH  221 (295)
T ss_dssp             EETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEE
T ss_pred             ccCCceeeeeccCcHHhhhccccCcccccccccccce
Confidence            999999999999999998654        77777764
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure