Citrus Sinensis ID: 004314
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 761 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LMI0 | 851 | Probable alpha,alpha-treh | yes | no | 0.982 | 0.878 | 0.770 | 0.0 | |
| O23617 | 862 | Alpha,alpha-trehalose-pho | no | no | 0.986 | 0.871 | 0.685 | 0.0 | |
| Q94AH8 | 860 | Alpha,alpha-trehalose-pho | no | no | 0.980 | 0.867 | 0.668 | 0.0 | |
| Q9LRA7 | 867 | Probable alpha,alpha-treh | no | no | 0.982 | 0.862 | 0.630 | 0.0 | |
| Q0WUI9 | 856 | Probable alpha,alpha-treh | no | no | 0.984 | 0.875 | 0.619 | 0.0 | |
| O80738 | 861 | Probable alpha,alpha-treh | no | no | 0.988 | 0.873 | 0.624 | 0.0 | |
| Q9ZV48 | 862 | Probable alpha,alpha-treh | no | no | 0.973 | 0.859 | 0.581 | 0.0 | |
| Q54K57 | 733 | Alpha,alpha-trehalose-pho | yes | no | 0.825 | 0.856 | 0.367 | 1e-136 | |
| Q9FZ57 | 822 | Probable alpha,alpha-treh | no | no | 0.856 | 0.793 | 0.352 | 1e-117 | |
| Q9SYM4 | 942 | Alpha,alpha-trehalose-pho | no | no | 0.854 | 0.690 | 0.338 | 1e-113 |
| >sp|Q9LMI0|TPS7_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 OS=Arabidopsis thaliana GN=TPS7 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 1245 bits (3222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 581/754 (77%), Positives = 678/754 (89%), Gaps = 6/754 (0%)
Query: 1 MMSKSYTNLLDLASGNFPAMGPSREKKRLPRVMTVPGVISELDDDQANSVSSDVPSSVAQ 60
M+S+SYTNLLDLASGNFP MG RE++RLPRVMTVPG +SE D+DQA SVSSD PSSV+
Sbjct: 1 MISRSYTNLLDLASGNFPVMG--RERRRLPRVMTVPGNVSEFDEDQAYSVSSDNPSSVSS 58
Query: 61 DRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSE 120
DR+IIVAN+LP+KA++R N WSFSWD+DSL LQLKDGLPEDME++YVGSL VDVD +E
Sbjct: 59 DRMIIVANRLPLKAEKR--NGSWSFSWDQDSLYLQLKDGLPEDMEILYVGSLSVDVDSNE 116
Query: 121 QDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWE 180
QDDV+Q+LLD+FKCVP F PPD+ +KFY GFCK+ +WPLFHYMLPFSA HGGRFDRSLWE
Sbjct: 117 QDDVAQILLDKFKCVPTFFPPDLQSKFYDGFCKRQIWPLFHYMLPFSADHGGRFDRSLWE 176
Query: 181 AYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEI 240
AYV+ NK+F Q+VIEVINP+DD+VWIHDYHLMVLPTFLRRRF R+RMGFFLHSPFPSSEI
Sbjct: 177 AYVATNKLFFQKVIEVINPDDDFVWIHDYHLMVLPTFLRRRFNRIRMGFFLHSPFPSSEI 236
Query: 241 YRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVG 300
YR+LPVREEILKALLN+DLIGFHTFDYARHFL+CCSRMLGLEYQSKRGYIGLEYYGRTVG
Sbjct: 237 YRSLPVREEILKALLNSDLIGFHTFDYARHFLTCCSRMLGLEYQSKRGYIGLEYYGRTVG 296
Query: 301 IKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEH 360
IKIMPVGI+MG+I+SV+R ++++ +V EL+ +FEGKTVLLG+DDMDIFKG++LKLLAME
Sbjct: 297 IKIMPVGINMGRIQSVMRYSEEEGKVMELRNRFEGKTVLLGIDDMDIFKGINLKLLAMEQ 356
Query: 361 LLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKP 420
+L+QHP W+GRAVLVQI NPARG+G D+EEI+ EI +C+RIN FG+PGY+P+++ID P
Sbjct: 357 MLRQHPNWRGRAVLVQIVNPARGKGIDVEEIRGEIEESCRRINGEFGKPGYQPIIYIDTP 416
Query: 421 VTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSE 480
V+++E AYY IAECVVVTAVRDGMNLTPYEYIVCRQG+ GSE S+ S PKKSMLV SE
Sbjct: 417 VSINEINAYYHIAECVVVTAVRDGMNLTPYEYIVCRQGLLGSE--SDFSGPKKSMLVASE 474
Query: 481 FIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSF 540
FIGCSPSLSGAIRVNPWN+EAT EA++EA+ M++AEKQLRHEKH+RYVSTHDVAYW+RSF
Sbjct: 475 FIGCSPSLSGAIRVNPWNVEATGEALNEALSMSDAEKQLRHEKHFRYVSTHDVAYWSRSF 534
Query: 541 FQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDYDG 600
QD+ER C DHFK+RCWG+G+SFGFRVVALDPNFRKLSI IVS Y R+KSRAIL DYDG
Sbjct: 535 LQDLERICVDHFKKRCWGMGISFGFRVVALDPNFRKLSIPCIVSDYKRAKSRAILLDYDG 594
Query: 601 TVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGY 660
T+MPQ SINKAPSQ V++ ++ LC D +N++F+VSGRGR+ L KWF+PCKK+GIAAEHGY
Sbjct: 595 TLMPQNSINKAPSQEVLNFLDALCEDKKNSIFIVSGRGRESLSKWFTPCKKIGIAAEHGY 654
Query: 661 FMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFG 720
F++WS EEW+ CGQS DFGW+QI EPVMK YTESTDGS IEIKESALVW +RDADPGFG
Sbjct: 655 FLKWSGSEEWETCGQSSDFGWMQIVEPVMKQYTESTDGSSIEIKESALVWQYRDADPGFG 714
Query: 721 SSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQ 754
S QAKE+L+HLESVLANEP AVKSG +IVEVKPQ
Sbjct: 715 SLQAKEMLEHLESVLANEPVAVKSGHYIVEVKPQ 748
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Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 5 |
| >sp|O23617|TPS5_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 OS=Arabidopsis thaliana GN=TPS5 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1105 bits (2858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/757 (68%), Positives = 619/757 (81%), Gaps = 6/757 (0%)
Query: 1 MMSKSYTNLLDLASGNFPAMGPSREKKRLPRVMTVPGVISELDDDQ-ANSVSSDVPSSVA 59
M+S+SY+NLLDLASGNF + SREKKR PRV TV GV+SELDDD +NSV SD PSSV
Sbjct: 1 MVSRSYSNLLDLASGNFHSF--SREKKRFPRVATVTGVLSELDDDNNSNSVCSDAPSSVT 58
Query: 60 QDRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLS 119
QDR+IIV NQLP+K+ R K SFSWD DSLLLQLKDG+ EDMEV+Y+G LK +D
Sbjct: 59 QDRIIIVGNQLPIKSHRNSAGK-LSFSWDNDSLLLQLKDGMREDMEVVYIGCLKEQIDTV 117
Query: 120 EQDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLW 179
EQDDVSQ LL+ FKCVPA++PP++ TK+YHGFCKQHLWPLFHYMLP + GGRFDRSLW
Sbjct: 118 EQDDVSQRLLENFKCVPAYIPPELFTKYYHGFCKQHLWPLFHYMLPLTPDLGGRFDRSLW 177
Query: 180 EAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSE 239
+AY+S NKIF+ +V+EVI+P+DD+VW+HDYHLMVLPTFLR+RF R+++GFFLHSPFPSSE
Sbjct: 178 QAYLSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 237
Query: 240 IYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTV 299
IYRTLPVR E+L+ALLNADLIGFHTFDYARHFLSCCSRMLGL YQSKRG IGLEYYGRTV
Sbjct: 238 IYRTLPVRNELLRALLNADLIGFHTFDYARHFLSCCSRMLGLSYQSKRGTIGLEYYGRTV 297
Query: 300 GIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAME 359
IKI+PVGIH+ Q++S+L L + +V EL+ QF + VLLGVDDMDIFKG+ LKLLAME
Sbjct: 298 SIKILPVGIHISQLQSILNLPETQTKVAELRDQFLDQKVLLGVDDMDIFKGISLKLLAME 357
Query: 360 HLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDK 419
LL QHP+ +GR VLVQIANPARGRGKD++E+Q+E AT KRINE FGRPGY+PVV ID
Sbjct: 358 QLLTQHPEKRGRVVLVQIANPARGRGKDVQEVQSETEATVKRINEMFGRPGYQPVVLIDT 417
Query: 420 PVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSS--ESSAPKKSMLV 477
P+ ER AYY IAEC +VTAVRDGMNL PYEYI+CRQG + + SA KKSMLV
Sbjct: 418 PLQFFERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNPKLNETIGLDPSAAKKSMLV 477
Query: 478 VSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWA 537
VSEFIGCSPSLSGAIRVNPWNI+A EAM A+ ++EAEKQ+RHEKH++YVSTHDVAYWA
Sbjct: 478 VSEFIGCSPSLSGAIRVNPWNIDAVTEAMDYALIVSEAEKQMRHEKHHKYVSTHDVAYWA 537
Query: 538 RSFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFD 597
RSF QD+ER C DH ++RCWGIG GFRVVALDP+F+KLSI+ IVSAY R+K+RAIL D
Sbjct: 538 RSFIQDLERACGDHVRKRCWGIGFGLGFRVVALDPSFKKLSIEHIVSAYKRTKNRAILLD 597
Query: 598 YDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAE 657
YDGT++ SI P++ I I+N L +D +N V++VSG+ R L +WFS C LG+ AE
Sbjct: 598 YDGTMVQPGSIRTTPTRETIEILNNLSSDPKNIVYLVSGKDRRTLTEWFSSCDDLGLGAE 657
Query: 658 HGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADP 717
HGYF+R + +W+ F W QIAEPVM+LYTE+TDGS IE KE+ALVW+++ ADP
Sbjct: 658 HGYFIRPNDGTDWETSSLVSGFEWKQIAEPVMRLYTETTDGSTIETKETALVWNYQFADP 717
Query: 718 GFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQ 754
FGS QAKEL++HLESVL N+P +VK+GQ +VEVKPQ
Sbjct: 718 DFGSCQAKELMEHLESVLTNDPVSVKTGQQLVEVKPQ 754
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q94AH8|TPS6_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 OS=Arabidopsis thaliana GN=TPS6 PE=1 SV=2 | Back alignment and function description |
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Score = 1092 bits (2823), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/773 (66%), Positives = 625/773 (80%), Gaps = 27/773 (3%)
Query: 1 MMSKSYTNLLDLASGNFPAMGPSREKKRLPRVMTVPGVISELDDDQANSVSSDVPSSVAQ 60
M+S+SY+NLL+LASG+ P G R +++PR+M V G++S +D+D ++ S +
Sbjct: 1 MVSRSYSNLLELASGDSPTFG--RMNRQIPRIMAVAGIMSNIDNDSKDTDLS------PK 52
Query: 61 DRVIIVANQLPVKAKRRPDN-------------KGWSFSWDEDSLLLQLKDGL-PEDMEV 106
DR+IIVAN+LP++A+RR D KGW+FSWDE+SLLLQLKDGL E +EV
Sbjct: 53 DRIIIVANELPIRAQRRVDGNGSGSSSSSTCCSKGWNFSWDENSLLLQLKDGLGDEAIEV 112
Query: 107 IYVGSLKVDVDLSEQDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPF 166
IYVG LK ++ L+EQ++V Q+LL+ FKCVP FLP D+ T++YHGFCKQ LWPLFHYMLP
Sbjct: 113 IYVGCLKEEIPLNEQEEVYQILLESFKCVPTFLPLDLYTRYYHGFCKQQLWPLFHYMLPL 172
Query: 167 SATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLR 226
S GGRFDR+LW+AYVS NKIF+ R++EVINPEDD+VWIHDYHLMVLPTFLR+RF R++
Sbjct: 173 SPDLGGRFDRTLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVK 232
Query: 227 MGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSK 286
+GFFLHSPFPSSEIY+TLP+REE+L+ALLN+DLIGFHTFDYARHFLSCCSRMLGL Y+SK
Sbjct: 233 LGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESK 292
Query: 287 RGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF--EGKTVLLGVDD 344
RGYIGLEYYGRTV IKI+PVGIHMGQ++SVL L + + +V EL +++ +G+T+LLGVDD
Sbjct: 293 RGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETERKVGELIERYGRKGRTMLLGVDD 352
Query: 345 MDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINE 404
MDIFKG+ LKLLAME LL QHP+WQG+ VLVQIANPARG+GKD++E+QAE ++T KRINE
Sbjct: 353 MDIFKGITLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEMQAETYSTVKRINE 412
Query: 405 TFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSES 464
TFGRPGY+P+V ID P+ ER AYY +AEC +VTAVRDGMNL PYEYIV RQG +
Sbjct: 413 TFGRPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIVSRQGNEKLDK 472
Query: 465 SSESSAP---KKSMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRH 521
+ A KKSMLVVSEFIGCSPSLSGAIRVNPWN++A A+AM A+++ E EKQLRH
Sbjct: 473 ILKLEANNRNKKSMLVVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALEVAEPEKQLRH 532
Query: 522 EKHYRYVSTHDVAYWARSFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDA 581
EKHY+YVSTHDV YWARSF QD+ER+C +H +RRCWGIG FRVVALD +FRKLS++
Sbjct: 533 EKHYKYVSTHDVGYWARSFLQDLERSCGEHGRRRCWGIGFGLSFRVVALDQSFRKLSMEH 592
Query: 582 IVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDC 641
IVSAY R+K+RAIL DYD T+MPQ SI+K PS I I+NTLC D N VF+VS + R+
Sbjct: 593 IVSAYKRTKTRAILLDYDDTLMPQGSIDKRPSSKSIDILNTLCRDKGNLVFIVSAKSRET 652
Query: 642 LGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYI 701
L WFSPC+KLGIAAEHGYF+R EW+NC +VD W QIAEPVM+LYTE+TDGS I
Sbjct: 653 LSDWFSPCEKLGIAAEHGYFLRLRKAVEWENCVAAVDCSWKQIAEPVMELYTETTDGSTI 712
Query: 702 EIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQ 754
E KE+ALVW + DADP FGS QAKELLDHLESVLANEP VK GQ VEVKPQ
Sbjct: 713 EDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKRGQNYVEVKPQ 765
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Regulates plant architecture, shape of epidermal pavement cells and branching of trichomes. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9LRA7|TPS9_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 OS=Arabidopsis thaliana GN=TPS9 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1024 bits (2648), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/760 (63%), Positives = 597/760 (78%), Gaps = 12/760 (1%)
Query: 1 MMSKSYTNLLDLASGN---FPAMGPSREKKRLPRVMTVPGVISELDDDQANSVSSDVPSS 57
M+S+S N LDLAS + FP + ++ LPRVMTVPG+ISELD ++ S S+
Sbjct: 1 MVSRSCANFLDLASWDLLDFP-----QTQRALPRVMTVPGIISELDGGYSDGSSDVNSSN 55
Query: 58 VAQDRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVD 117
+++R IIVAN LP++AKR + W FSWDEDSLLLQL+DG D E +Y+GSL D+
Sbjct: 56 SSRERKIIVANMLPLQAKRDTETGQWCFSWDEDSLLLQLRDGFSSDTEFVYIGSLNADIG 115
Query: 118 LSEQDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRS 177
+SEQ++VS LL F CVP FLP ++ KFY GFCK HLWPLFHYMLP HG RFDR
Sbjct: 116 ISEQEEVSHKLLLDFNCVPTFLPKEMQEKFYLGFCKHHLWPLFHYMLPMFPDHGDRFDRR 175
Query: 178 LWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPS 237
LW+AYVSANKIFS RV+EVINPE+DYVWIHDYHLMVLPTFLR+RF R+++GFFLHSPFPS
Sbjct: 176 LWQAYVSANKIFSDRVMEVINPEEDYVWIHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPS 235
Query: 238 SEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGR 297
SEIYRTLPVR+++L+ LLN DLIGFHTFDYARHFLSCCSRMLGL+Y+SKRG+IGL+Y+GR
Sbjct: 236 SEIYRTLPVRDDLLRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGR 295
Query: 298 TVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLA 357
TV IKI+PVGIHMG++ESVL L +++E+++QF+GK ++LGVDDMDIFKG+ LKL+A
Sbjct: 296 TVFIKILPVGIHMGRLESVLNLPSTAAKMKEIQEQFKGKKLILGVDDMDIFKGISLKLIA 355
Query: 358 MEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFI 417
ME L + + +G+ VL+QI NPAR GKD+EE + E ++T KRINE +G GY+PV+ I
Sbjct: 356 MERLFETYWHMRGKLVLIQIVNPARATGKDVEEAKKETYSTAKRINERYGSAGYQPVILI 415
Query: 418 DKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESS---SESSAPKKS 474
D+ V E+ AYY +A+C +V AVRDGMNL PY+YI+CRQG G + + S SA + S
Sbjct: 416 DRLVPRYEKTAYYAMADCCLVNAVRDGMNLVPYKYIICRQGTPGMDKAMGISHDSA-RTS 474
Query: 475 MLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVA 534
MLVVSEFIGCSPSLSGAIRVNPW+++A AEA++ A+ M E EK+LRHEKHY YVSTHDV
Sbjct: 475 MLVVSEFIGCSPSLSGAIRVNPWDVDAVAEAVNLALTMGETEKRLRHEKHYHYVSTHDVG 534
Query: 535 YWARSFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAI 594
YWA+SF QD+ER C++H+ +RCWGIG FRV++L P+FRKLSID IVS Y ++ RAI
Sbjct: 535 YWAKSFMQDLERACREHYNKRCWGIGFGLSFRVLSLSPSFRKLSIDHIVSTYRNTQRRAI 594
Query: 595 LFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGI 654
DYDGT++P++SI K P+ V+S++ +LC D +NTVFVVSGRG + L W SPC+ LGI
Sbjct: 595 FLDYDGTLVPESSIIKTPNAEVLSVLKSLCGDPKNTVFVVSGRGWESLSDWLSPCENLGI 654
Query: 655 AAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRD 714
AAEHGYF+RWS+ +EW+ C S + W + EPVM+ Y ++TDGS IE KESALVWHH+D
Sbjct: 655 AAEHGYFIRWSSKKEWETCYSSAEAEWKTMVEPVMRSYMDATDGSTIEYKESALVWHHQD 714
Query: 715 ADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQ 754
ADP FG+ QAKELLDHLESVLANEP VK GQ IVEVKPQ
Sbjct: 715 ADPDFGACQAKELLDHLESVLANEPVVVKRGQHIVEVKPQ 754
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q0WUI9|TPS8_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 8 OS=Arabidopsis thaliana GN=TPS8 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1019 bits (2634), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/754 (61%), Positives = 591/754 (78%), Gaps = 5/754 (0%)
Query: 1 MMSKSYTNLLDLASGNFPAMGPSREKKRLPRVMTVPGVISELDDDQANSVSSDVPSSVAQ 60
M+S+S N LDL+S + + + + LPRVMTVPG+I+++D D + V+S S ++
Sbjct: 1 MVSRSCANFLDLSSWDL--LDFPQTPRTLPRVMTVPGIITDVDGDTTSEVTS--TSGGSR 56
Query: 61 DRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSE 120
+R IIVAN LP+++KR + W F+WDEDSL LQL+DG + E +YVGSL VD++ +E
Sbjct: 57 ERKIIVANMLPLQSKRDAETGKWCFNWDEDSLQLQLRDGFSSETEFLYVGSLNVDIETNE 116
Query: 121 QDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWE 180
Q++VSQ LL+ F CV FL ++ FY GFCK LWPLFHYMLP HG RFDR LW+
Sbjct: 117 QEEVSQKLLEEFNCVATFLSQELQEMFYLGFCKHQLWPLFHYMLPMFPDHGDRFDRRLWQ 176
Query: 181 AYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEI 240
AYVSANKIFS RV+EVINPEDDYVWI DYHLMVLPTFLR+RF R+++GFFLHSPFPSSEI
Sbjct: 177 AYVSANKIFSDRVMEVINPEDDYVWIQDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEI 236
Query: 241 YRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVG 300
YRTLPVR+EIL+ LLN DLIGFHTFDYARHFLSCCSRMLGL+Y+SKRG+IGL+Y+GRTV
Sbjct: 237 YRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVY 296
Query: 301 IKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEH 360
IKI+PVG+HMG++ESVL L + +E+++QF+GK ++LG+DDMDIFKG+ LKL+AMEH
Sbjct: 297 IKILPVGVHMGRLESVLSLDSTAAKTKEIQEQFKGKKLVLGIDDMDIFKGISLKLIAMEH 356
Query: 361 LLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKP 420
L + + +G+ VLVQI NPAR GKD+EE + E + T +RINE +G Y+P+V ID+
Sbjct: 357 LFETYWHLKGKVVLVQIVNPARSSGKDVEEAKRETYETARRINERYGTSDYKPIVLIDRL 416
Query: 421 VTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSE 480
V SE+ AYY A+C +V AVRDGMNL PY+YIVCRQG +++ +SS P+ S LVVSE
Sbjct: 417 VPRSEKTAYYAAADCCLVNAVRDGMNLVPYKYIVCRQGTRSNKAVVDSS-PRTSTLVVSE 475
Query: 481 FIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSF 540
FIGCSPSLSGAIRVNPW+++A AEA++ A++M+E EKQLRHEKHY Y+STHDV YWA+SF
Sbjct: 476 FIGCSPSLSGAIRVNPWDVDAVAEAVNSALKMSETEKQLRHEKHYHYISTHDVGYWAKSF 535
Query: 541 FQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDYDG 600
QD+ER C+DH+ +RCWGIG GFRV++L P+FRKLS++ IV Y +++ RAI DYDG
Sbjct: 536 MQDLERACRDHYSKRCWGIGFGLGFRVLSLSPSFRKLSVEHIVPVYRKTQRRAIFLDYDG 595
Query: 601 TVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGY 660
T++P++SI + PS V+S++ LC D NTVF+VSGRGR+ L W SPC+ LGIAAEHGY
Sbjct: 596 TLVPESSIVQDPSNEVVSVLKALCEDPNNTVFIVSGRGRESLSNWLSPCENLGIAAEHGY 655
Query: 661 FMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFG 720
F+RW + +EW+ C D W + EPVM+ Y E+TDG+ IE KESALVWHH+DADP FG
Sbjct: 656 FIRWKSKDEWETCYSPTDTEWRSMVEPVMRSYMEATDGTSIEFKESALVWHHQDADPDFG 715
Query: 721 SSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQ 754
S QAKE+LDHLESVLANEP VK GQ IVEVKPQ
Sbjct: 716 SCQAKEMLDHLESVLANEPVVVKRGQHIVEVKPQ 749
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|O80738|TPS10_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10 OS=Arabidopsis thaliana GN=TPS10 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1006 bits (2601), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/756 (62%), Positives = 580/756 (76%), Gaps = 4/756 (0%)
Query: 1 MMSKSYTNLLDLASGNFPAMGPSREKKRLPRVMTVPGVISELDDDQANSVSSDVPSSVAQ 60
M SKS+ NLLDLASG+ + + + LPRVMTVPG+IS++D + SDV S +
Sbjct: 1 MGSKSFGNLLDLASGDL--LDIPQTPRYLPRVMTVPGIISDVDGYGISDGDSDVISLPCR 58
Query: 61 DRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSE 120
+R IIVAN LP+ K+ + W FS D DS LL LKDG + EVIYVGSLK VD+SE
Sbjct: 59 ERKIIVANFLPLNGKKDSETGKWKFSLDNDSPLLHLKDGFSPETEVIYVGSLKTHVDVSE 118
Query: 121 QDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWE 180
QD+VS L + F CV FLP D+ KFY GFCKQ LWPLFHYMLP HG RFDR LW+
Sbjct: 119 QDEVSHNLFEEFNCVATFLPQDVHKKFYLGFCKQQLWPLFHYMLPMCPDHGERFDRGLWQ 178
Query: 181 AYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEI 240
AYVSANKIF+ +V+ VIN E+DY+WIHDYHLMVLPTFLRRRF R+++GFFLHSPFPSSEI
Sbjct: 179 AYVSANKIFADKVMGVINLEEDYIWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEI 238
Query: 241 YRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVG 300
YRTLPVREE+L+ LLN DLIGFHTFDYARHFLSCC RMLGLEY+SKRG+I L+Y GRTV
Sbjct: 239 YRTLPVREELLRGLLNCDLIGFHTFDYARHFLSCCCRMLGLEYESKRGHIALDYLGRTVF 298
Query: 301 IKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEH 360
+KI+P+GIHMG++ESVL L +++E+++++ GK ++LGVDDMDIFKG+ LK+LA EH
Sbjct: 299 LKILPIGIHMGRLESVLNLPATAEKLKEIQEKYRGKKIILGVDDMDIFKGLSLKILAFEH 358
Query: 361 LLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKP 420
LL+Q+P G+ VL+QI NPARG GKD++E + E + T KRINE +G YEPVV ID+P
Sbjct: 359 LLQQYPSMLGKIVLIQIVNPARGSGKDVQEARKETYDTVKRINERYGSHDYEPVVLIDRP 418
Query: 421 VTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESS--APKKSMLVV 478
V E++AYY +AEC +V AVRDGMNL PY+Y VCRQG S S P+ S LV+
Sbjct: 419 VPRFEKSAYYALAECCIVNAVRDGMNLVPYKYTVCRQGTPSMNKSLGVSDDLPRTSTLVL 478
Query: 479 SEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWAR 538
SEFIGCSPSLSGAIRVNPW+++A A++++ AI M++ EKQLRH+KH+ Y+STHDV YWAR
Sbjct: 479 SEFIGCSPSLSGAIRVNPWDVDAVADSLYSAITMSDFEKQLRHKKHFHYISTHDVGYWAR 538
Query: 539 SFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDY 598
SF QD+ER +DH+ +RCWG+G GFR+VAL PNFR+LSI+ VSAY RS RAI DY
Sbjct: 539 SFSQDLERASRDHYSKRCWGVGWGLGFRLVALSPNFRRLSIEQTVSAYRRSSKRAIFLDY 598
Query: 599 DGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEH 658
DGT++P+TSI K PS VIS + LC+D NT+F+VSGRG+ L +W +PC+ LGIAAEH
Sbjct: 599 DGTLVPETSIVKDPSAEVISALKALCSDPNNTIFIVSGRGKVSLSEWLAPCENLGIAAEH 658
Query: 659 GYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPG 718
GYF RW+ +W+ G S D W ++ EP+M+LYTE+TDGS IE KESALVWHH+DADP
Sbjct: 659 GYFTRWNKSSDWETSGLSDDLEWKKVVEPIMRLYTETTDGSNIEAKESALVWHHQDADPD 718
Query: 719 FGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQ 754
FGS QAKELLDHLE+VL NEP V G IVEVKPQ
Sbjct: 719 FGSCQAKELLDHLETVLVNEPVIVNRGHQIVEVKPQ 754
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9ZV48|TPS11_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11 OS=Arabidopsis thaliana GN=TPS11 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 940 bits (2430), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/759 (58%), Positives = 567/759 (74%), Gaps = 18/759 (2%)
Query: 1 MMSKSYTNLLDLASGN-FPAMGPSREKKRLPRVMTVPGVISELDDDQANSVSSDVPSSVA 59
M +S+ + L L S + + MG + R+P +T +S L+ D N + V
Sbjct: 1 MSPESWKDQLSLVSADDYRIMG----RNRIPNAVTK---LSGLETDDPNG-----GAWVT 48
Query: 60 QDRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLS 119
+ + I+V+NQLP++A R + W F +D DSL LQLKDG P + EV+YVGSL DV S
Sbjct: 49 KPKRIVVSNQLPLRAHRDISSNKWCFEFDNDSLYLQLKDGFPPETEVVYVGSLNADVLPS 108
Query: 120 EQDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLW 179
EQ+DVSQ LL++F+CVP FLP D+L K+YHGFCK +LWP+FHY+LP + G FDRS W
Sbjct: 109 EQEDVSQFLLEKFQCVPTFLPSDLLNKYYHGFCKHYLWPIFHYLLPMTQAQGSLFDRSNW 168
Query: 180 EAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSE 239
AY + NKIF+ ++ EV+NP+DDYVWIHDYHLM+LPTFLR RF R+++G FLHSPFPSSE
Sbjct: 169 RAYTTVNKIFADKIFEVLNPDDDYVWIHDYHLMILPTFLRNRFHRIKLGIFLHSPFPSSE 228
Query: 240 IYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTV 299
IYRTLPVR+EILK LN DL+GFHTFDYARHFLSCCSRMLGL+Y+SKRGYIGLEY+GRTV
Sbjct: 229 IYRTLPVRDEILKGFLNCDLVGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTV 288
Query: 300 GIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAME 359
IKI+PVGIHMGQIES+ +V+ L+++F+G V+LGVDD+D+FKG+ LK AM
Sbjct: 289 SIKILPVGIHMGQIESIKASEKTAEKVKRLRERFKGNIVMLGVDDLDMFKGISLKFWAMG 348
Query: 360 HLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRP-GYEPVVFID 418
LL+Q+ + +G+ VLVQI NPAR GKD+++++ +I+ IN FGRP GY+P+VFI+
Sbjct: 349 QLLEQNEELRGKVVLVQITNPARSSGKDVQDVEKQINLIADEINSKFGRPGGYKPIVFIN 408
Query: 419 KPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESS---SESSAPKKSM 475
PV+ ++ AYY I+ECVVV AVRDGMNL PY+Y V RQG +++ E +KS+
Sbjct: 409 GPVSTLDKVAYYAISECVVVNAVRDGMNLVPYKYTVTRQGSPALDAALGFGEDDV-RKSV 467
Query: 476 LVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAY 535
++VSEFIGCSPSLSGAIRVNPWNI+A AM A+ M++ EK LRH+KH++Y+S+H+VAY
Sbjct: 468 IIVSEFIGCSPSLSGAIRVNPWNIDAVTNAMSSAMTMSDKEKNLRHQKHHKYISSHNVAY 527
Query: 536 WARSFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAIL 595
WARS+ QD++R CKDH+ +R WG+G F+VVALDPNFR+L + IV AY RS SR IL
Sbjct: 528 WARSYDQDLQRACKDHYNKRFWGVGFGLFFKVVALDPNFRRLCGETIVPAYRRSSSRLIL 587
Query: 596 FDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIA 655
DYDGT+M Q +++K PS +IS++N LC+D N VF+VSGRG+D L KWF C LGI+
Sbjct: 588 LDYDGTMMDQDTLDKRPSDDLISLLNRLCDDPSNLVFIVSGRGKDPLSKWFDSCPNLGIS 647
Query: 656 AEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDA 715
AEHGYF RW+++ W+ D W +IA+PVM Y E+TDGS+IE KESA+VWHH++A
Sbjct: 648 AEHGYFTRWNSNSPWETSELPADLSWKKIAKPVMNHYMEATDGSFIEEKESAMVWHHQEA 707
Query: 716 DPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQ 754
D FGS QAKELLDHLESVL NEP VK GQ IVEVKPQ
Sbjct: 708 DHSFGSWQAKELLDHLESVLTNEPVVVKRGQHIVEVKPQ 746
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q54K57|TPSA_DICDI Alpha,alpha-trehalose-phosphate synthase [UDP-forming] A OS=Dictyostelium discoideum GN=tpsA PE=2 SV=1 | Back alignment and function description |
|---|
Score = 486 bits (1250), Expect = e-136, Method: Compositional matrix adjust.
Identities = 248/675 (36%), Positives = 398/675 (58%), Gaps = 47/675 (6%)
Query: 62 RVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSEQ 121
R+I+V+N+LPV K+ + K WS L+ L GL + I+VG + +++ ++
Sbjct: 17 RLIVVSNRLPVSIKKESNGK-WSCKMSSGGLVAALS-GLKSNF--IWVGWIGAEIEEDDR 72
Query: 122 DDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEA 181
++ +LL + C+P FL + + Y+GF LWPLFHY LP +D +W +
Sbjct: 73 KEIKELLWKDYSCIPVFLSEKVANEHYNGFSNGVLWPLFHY-LPGDLD----YDDRIWNS 127
Query: 182 YVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIY 241
YV AN+ FS V E++ P +D VW+HDYH+M+LP L+++ R+GFFLH PFPSSEI+
Sbjct: 128 YVEANEQFSSVVAEILKP-NDLVWVHDYHMMLLPEILKQKKPDARIGFFLHIPFPSSEIF 186
Query: 242 RTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGI 301
R LP R+EIL +LN LIGFHT+DYARHFL C+R++GLE G+ + R V +
Sbjct: 187 RVLPCRKEILLGILNCCLIGFHTYDYARHFLKSCTRIVGLETAPN----GVYFKDRFVQV 242
Query: 302 KIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHL 361
+ PVGI + L+ R++ELK+ FEG VL+G+D +D KG+ KL A+E L
Sbjct: 243 GVFPVGIDPDKFFESLKTTQVQNRIKELKESFEGTKVLIGIDRLDYIKGIPQKLQAIERL 302
Query: 362 LKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPV 421
+++P+W+G+ VL+Q+A P+R ++ ++++ E+ RIN +G GY P+ ++ + V
Sbjct: 303 FQKYPEWKGKLVLIQVAVPSRQDVEEYQKLKKEVEELVGRINGLYGSIGYSPIHYLFQSV 362
Query: 422 TLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEF 481
SE A Y I++ ++T++RDGMNL EYIVC+ +G +L++SEF
Sbjct: 363 DPSELTALYNISDAALITSIRDGMNLVAQEYIVCQTENNG-------------VLILSEF 409
Query: 482 IGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFF 541
G + SLSGA+ +NPWN E A+++H ++ M E++ +H+ +YV+ H ++W F
Sbjct: 410 TGAAQSLSGAVMINPWNTEEVADSIHNSLLMPPEEREEKHQMLLKYVTKHTASHWGLGFV 469
Query: 542 QDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDYDGT 601
+++ + + K +KL I+ +V Y +SK R ++F YDGT
Sbjct: 470 KELNKASSNTDKMVT-----------------IQKLDIEKVVDIYKQSKRRLLIFAYDGT 512
Query: 602 VMPQTSINKA--PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHG 659
++P ++ + PSQ +++ + L ND + V+++SGR + L +WF ++G++AE+G
Sbjct: 513 LIPYNNVPQLSRPSQELLNSFDILSNDPKTDVYILSGRDKKTLSEWFLGI-QIGLSAEYG 571
Query: 660 YFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGF 719
F + EW+ S+D W + P+ K +T T GS+ E KE WH+R+ADP F
Sbjct: 572 CFFKLPESTEWEQQVPSMDLSWKETIRPLFKYFTLRTPGSFFEEKEMLFTWHYRNADPIF 631
Query: 720 GSSQAKELLDHLESV 734
GS QA+EL HL+++
Sbjct: 632 GSIQARELHLHLDNL 646
|
Synthesizes trehalose 6-phosphate, the precursor for the production of trehalose, the main carbohydrate storage reserve of the dormant spore. Trehalose accumulates in both prestalk and prespore cells and then is rapidly metabolized during terminal differentiation of stalk cells, while being stored in spores, where it serves as the principal energy and carbon source for germination. Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9FZ57|TPS2_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 2 OS=Arabidopsis thaliana GN=TPS2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 424 bits (1091), Expect = e-117, Method: Compositional matrix adjust.
Identities = 247/700 (35%), Positives = 390/700 (55%), Gaps = 48/700 (6%)
Query: 62 RVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDV-DLSE 120
R+++VAN+LPV AKR +N WS L+ L G+ + +VG VDV D E
Sbjct: 13 RLLVVANRLPVSAKRTGENS-WSLEMSPGGLVSGLL-GITSQFDTKWVGWPGVDVHDEIE 70
Query: 121 QDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYM-LPFSATHG-GRFDRSL 178
++ +++ L + KC+P FL + ++Y+G+C LWP+ H+M LP H + +
Sbjct: 71 KNALTESLAE-MKCIPVFLN-GVFDQYYNGYCNGILWPILHHMGLPQEDQHDTNQTFETQ 128
Query: 179 WEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSS 238
++AY AN++F +I+ E D VW HDYHLM LP +L+ ++++G+FLHSPFPSS
Sbjct: 129 YDAYKKANRMFLDVIIDNYE-EGDIVWCHDYHLMFLPQYLKEYNNKIKVGWFLHSPFPSS 187
Query: 239 EIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRT 298
E+Y+TLP R E+L+A+L ADL+GFHT+D+ARHFLS C+R+LG+E + G+ Y GR
Sbjct: 188 EVYKTLPSRSELLRAILAADLLGFHTYDFARHFLSTCTRILGVEGTHE----GVVYQGRV 243
Query: 299 VGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAM 358
+ + P+GI + +L + ++ EL+++F GK V+LGVD +D+ KG+ K LA
Sbjct: 244 TRVAVFPIGIDPDRFIRTCKLPEVTQQMNELQEKFAGKKVILGVDRLDMIKGIPQKYLAF 303
Query: 359 EHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFID 418
E L+++P W+ + VLVQIA P R + ++++++H RIN FG P+ +D
Sbjct: 304 EKFLEENPYWRDKVVLVQIAVPTRNDVPEYRKLKSQVHGLVGRINGRFGSVSSLPIHHLD 363
Query: 419 KPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVV 478
V + A Y IA+ ++VT++RDGMNL YE++ C++ KK +LV+
Sbjct: 364 CSVDFNYLCAIYAIADVMLVTSLRDGMNLVSYEFVACQEA-------------KKGVLVL 410
Query: 479 SEFIGCSPSLS-GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWA 537
SEF G SL GA+ VNPW++ + A+ EA+ M E++ RH +++YV TH W
Sbjct: 411 SEFAGAGQSLGVGALIVNPWDVTEVSSAIKEALNMPAEERETRHRSNFQYVCTHSAEKWG 470
Query: 538 RSFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFD 597
F ++ + R + L +L ++ Y +S +R I+
Sbjct: 471 LDFMSELNGIIPES----------EMQMRKIPL-----QLPEQDVIQQYSQSNNRLIILG 515
Query: 598 YDGTVM-PQTSINKAP----SQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKL 652
+ GT+ P S K + + + LCND + TV V+S G++ L K F +
Sbjct: 516 FFGTLAEPMNSGTKEMDLKLNPELKGTLKALCNDPKTTVVVLSRSGKNILNKNFGES-NI 574
Query: 653 GIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHH 712
+AAE+G F + + E N Q+V+ W+ + V K +T+ T SY E E++LVW++
Sbjct: 575 WLAAENGMFEKQTTGEWVTNMPQNVNLDWVDGVKNVFKYFTDRTPRSYFEASETSLVWNY 634
Query: 713 RDADPGFGSSQAKELLDHL-ESVLANEPAAVKSGQFIVEV 751
AD FG +QA++LL +L ++N V G VEV
Sbjct: 635 EYADVEFGRAQARDLLQYLWAGPISNASVDVVRGNHSVEV 674
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9SYM4|TPS1_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 OS=Arabidopsis thaliana GN=TPS1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 410 bits (1055), Expect = e-113, Method: Compositional matrix adjust.
Identities = 242/714 (33%), Positives = 396/714 (55%), Gaps = 64/714 (8%)
Query: 60 QDRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDV-DL 118
+ R+++VAN+LPV A RR ++ WS L+ L G+ E E ++G V+V D
Sbjct: 91 RQRLLVVANRLPVSAVRRGED-SWSLEISAGGLVSALL-GVKE-FEARWIGWAGVNVPDE 147
Query: 119 SEQDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYM-LP----FSATHGGR 173
Q +S+ L ++ +C+P FL +I+ ++Y+G+C LWPLFHY+ LP + T R
Sbjct: 148 VGQKALSKALAEK-RCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATT---R 203
Query: 174 FDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHS 233
+S + AY AN++F+ V E E D VW HDYHLM LP L+ +++++G+FLH+
Sbjct: 204 SFQSQFAAYKKANQMFADVVNEHYE-EGDVVWCHDYHLMFLPKCLKEYNSKMKVGWFLHT 262
Query: 234 PFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLE 293
PFPSSEI+RTLP R E+L+++L ADL+GFHT+DYARHF+S C+R+LGLE + G+E
Sbjct: 263 PFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPE----GVE 318
Query: 294 YYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDL 353
GR + P+GI + L + + ++ELK++F G+ V+LGVD +D+ KG+
Sbjct: 319 DQGRLTRVAAFPIGIDSDRFIRALEVPEVIQHMKELKERFAGRKVMLGVDRLDMIKGIPQ 378
Query: 354 KLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEP 413
K+LA E L+++ W+ + VL+QIA P R + +++ +++H RIN FG P
Sbjct: 379 KILAFEKFLEENANWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVP 438
Query: 414 VVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKK 473
+ +D+ + A Y + + +VT++RDGMNL YE++ C++ KK
Sbjct: 439 IHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQEA-------------KK 485
Query: 474 SMLVVSEFIGCSPSL-SGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHD 532
+L++SEF G + SL +GAI VNPWNI A ++ +A+ M E++ RH ++ +V TH
Sbjct: 486 GVLILSEFAGAAQSLGAGAILVNPWNITEVAASIGQALNMTAEEREKRHRHNFHHVKTHT 545
Query: 533 VAYWARSFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSR 592
WA +F ++ T + R+ + P +L + Y +S +R
Sbjct: 546 AQEWAETFVSELNDTV------------IEAQLRISKVPP---ELPQHDAIQRYSKSNNR 590
Query: 593 AILFDYDGTV-------------MPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGR 639
++ ++ T+ + + +N P + + LC+D T+ V+SG R
Sbjct: 591 LLILGFNATLTEPVDNQGRRGDQIKEMDLNLHPE--LKGPLKALCSDPSTTIVVLSGSSR 648
Query: 640 DCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGS 699
L K F + +AAE+G F+R + E + ++ W+ + V K +TE T S
Sbjct: 649 SVLDKNFGEY-DMWLAAENGMFLRLTNGEWMTTMPEHLNMEWVDSVKHVFKYFTERTPRS 707
Query: 700 YIEIKESALVWHHRDADPGFGSSQAKELLDHL-ESVLANEPAAVKSGQFIVEVK 752
+ E ++++L+W+++ AD FG QA++LL HL ++N V G VEV+
Sbjct: 708 HFETRDTSLIWNYKYADIEFGRLQARDLLQHLWTGPISNASVDVVQGSRSVEVR 761
|
Required for normal embryo development, vegetative growth and transition to flowering. Regulates embryo growth, cell wall deposition, starch and sucrose degradation, but not cell differentiation. Involved in the regulation of glucose sensing and signaling genes during plant development. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 761 | ||||||
| TAIR|locus:2202290 | 851 | TPS7 "trehalose-phosphatase/sy | 0.982 | 0.878 | 0.751 | 0.0 | |
| TAIR|locus:2129425 | 862 | TPS5 "trehalose phosphatase/sy | 0.986 | 0.871 | 0.675 | 9e-283 | |
| TAIR|locus:2200216 | 860 | ATTPS6 [Arabidopsis thaliana ( | 0.984 | 0.870 | 0.651 | 3.4e-274 | |
| TAIR|locus:2199847 | 867 | TPS9 "trehalose-phosphatase/sy | 0.985 | 0.865 | 0.622 | 2.5e-264 | |
| TAIR|locus:2016179 | 856 | TPS8 "trehalose-6-phosphatase | 0.984 | 0.875 | 0.607 | 3.7e-261 | |
| TAIR|locus:2195678 | 861 | TPS10 "trehalose phosphate syn | 0.988 | 0.873 | 0.611 | 1e-258 | |
| TAIR|locus:2054027 | 862 | TPS11 "trehalose phosphatase/s | 0.975 | 0.860 | 0.571 | 4.4e-242 | |
| TAIR|locus:2137712 | 795 | TPS4 "trehalose-6-phosphatase | 0.847 | 0.811 | 0.332 | 2.5e-97 | |
| UNIPROTKB|G4N8C1 | 1020 | MGG_03441 "Trehalose-phosphata | 0.480 | 0.358 | 0.342 | 8.2e-94 | |
| DICTYBASE|DDB_G0287657 | 733 | tpsA "alpha,alpha-trehalose-ph | 0.601 | 0.624 | 0.377 | 2.1e-93 |
| TAIR|locus:2202290 TPS7 "trehalose-phosphatase/synthase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3118 (1102.6 bits), Expect = 0., P = 0.
Identities = 567/754 (75%), Positives = 662/754 (87%)
Query: 1 MMSKSYTNLLDLASGNFPAMGPSREKKRLPRVMTVPGVISELDDDQANSVSSDVPSSVAQ 60
M+S+SYTNLLDLASGNFP MG RE++RLPRVMTVPG +SE D+DQA SVSSD PSSV+
Sbjct: 1 MISRSYTNLLDLASGNFPVMG--RERRRLPRVMTVPGNVSEFDEDQAYSVSSDNPSSVSS 58
Query: 61 DRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSE 120
DR+IIVAN+LP+KA++R N WSFSWD+DSL LQLKDGLPEDME++YVGSL VDVD +E
Sbjct: 59 DRMIIVANRLPLKAEKR--NGSWSFSWDQDSLYLQLKDGLPEDMEILYVGSLSVDVDSNE 116
Query: 121 QDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWE 180
QDDV+Q+LLD+FKCVP F PPD+ +KFY GFCK+ +WPLFHYMLPFSA HGGRFDRSLWE
Sbjct: 117 QDDVAQILLDKFKCVPTFFPPDLQSKFYDGFCKRQIWPLFHYMLPFSADHGGRFDRSLWE 176
Query: 181 AYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPXXXXXXXXXXXMGFFLHSPFPSSEI 240
AYV+ NK+F Q+VIEVINP+DD+VWIHDYHLMVLP MGFFLHSPFPSSEI
Sbjct: 177 AYVATNKLFFQKVIEVINPDDDFVWIHDYHLMVLPTFLRRRFNRIRMGFFLHSPFPSSEI 236
Query: 241 YRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVG 300
YR+LPVREEILKALLN+DLIGFHTFDYARHFL+CCSRMLGLEYQSKRGYIGLEYYGRTVG
Sbjct: 237 YRSLPVREEILKALLNSDLIGFHTFDYARHFLTCCSRMLGLEYQSKRGYIGLEYYGRTVG 296
Query: 301 IKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEH 360
IKIMPVGI+MG+I+SV+R ++++ +V EL+ +FEGKTVLLG+DDMDIFKG++LKLLAME
Sbjct: 297 IKIMPVGINMGRIQSVMRYSEEEGKVMELRNRFEGKTVLLGIDDMDIFKGINLKLLAMEQ 356
Query: 361 LLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKP 420
+L+QHP W+GRAVLVQI NPARG+G D+EEI+ EI +C+RIN FG+PGY+P+++ID P
Sbjct: 357 MLRQHPNWRGRAVLVQIVNPARGKGIDVEEIRGEIEESCRRINGEFGKPGYQPIIYIDTP 416
Query: 421 VTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVXXXXXXXXXXAPKKSMLVVSE 480
V+++E AYY IAECVVVTAVRDGMNLTPYEYIVCRQG+ PKKSMLV SE
Sbjct: 417 VSINEINAYYHIAECVVVTAVRDGMNLTPYEYIVCRQGLLGSESDFS--GPKKSMLVASE 474
Query: 481 FIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSF 540
FIGCSPSLSGAIRVNPWN+EAT EA++EA+ M++AEKQLRHEKH+RYVSTHDVAYW+RSF
Sbjct: 475 FIGCSPSLSGAIRVNPWNVEATGEALNEALSMSDAEKQLRHEKHFRYVSTHDVAYWSRSF 534
Query: 541 FQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDYDG 600
QD+ER C DHFK+RCWG+G+SFGFRVVALDPNFRKLSI IVS Y R+KSRAIL DYDG
Sbjct: 535 LQDLERICVDHFKKRCWGMGISFGFRVVALDPNFRKLSIPCIVSDYKRAKSRAILLDYDG 594
Query: 601 TVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGY 660
T+MPQ SINKAPSQ V++ ++ LC D +N++F+VSGRGR+ L KWF+PCKK+GIAAEHGY
Sbjct: 595 TLMPQNSINKAPSQEVLNFLDALCEDKKNSIFIVSGRGRESLSKWFTPCKKIGIAAEHGY 654
Query: 661 FMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFG 720
F++WS EEW+ CGQS DFGW+QI EPVMK YTESTDGS IEIKESALVW +RDADPGFG
Sbjct: 655 FLKWSGSEEWETCGQSSDFGWMQIVEPVMKQYTESTDGSSIEIKESALVWQYRDADPGFG 714
Query: 721 SSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQ 754
S QAKE+L+HLESVLANEP AVKSG +IVEVKPQ
Sbjct: 715 SLQAKEMLEHLESVLANEPVAVKSGHYIVEVKPQ 748
|
|
| TAIR|locus:2129425 TPS5 "trehalose phosphatase/synthase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2717 (961.5 bits), Expect = 9.0e-283, P = 9.0e-283
Identities = 511/757 (67%), Positives = 606/757 (80%)
Query: 1 MMSKSYTNLLDLASGNFPAMGPSREKKRLPRVMTVPGVISELDDDQ-ANSVSSDVPSSVA 59
M+S+SY+NLLDLASGNF + SREKKR PRV TV GV+SELDDD +NSV SD PSSV
Sbjct: 1 MVSRSYSNLLDLASGNFHSF--SREKKRFPRVATVTGVLSELDDDNNSNSVCSDAPSSVT 58
Query: 60 QDRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLS 119
QDR+IIV NQLP+K+ R K SFSWD DSLLLQLKDG+ EDMEV+Y+G LK +D
Sbjct: 59 QDRIIIVGNQLPIKSHRNSAGK-LSFSWDNDSLLLQLKDGMREDMEVVYIGCLKEQIDTV 117
Query: 120 EQDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLW 179
EQDDVSQ LL+ FKCVPA++PP++ TK+YHGFCKQHLWPLFHYMLP + GGRFDRSLW
Sbjct: 118 EQDDVSQRLLENFKCVPAYIPPELFTKYYHGFCKQHLWPLFHYMLPLTPDLGGRFDRSLW 177
Query: 180 EAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPXXXXXXXXXXXMGFFLHSPFPSSE 239
+AY+S NKIF+ +V+EVI+P+DD+VW+HDYHLMVLP +GFFLHSPFPSSE
Sbjct: 178 QAYLSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 237
Query: 240 IYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTV 299
IYRTLPVR E+L+ALLNADLIGFHTFDYARHFLSCCSRMLGL YQSKRG IGLEYYGRTV
Sbjct: 238 IYRTLPVRNELLRALLNADLIGFHTFDYARHFLSCCSRMLGLSYQSKRGTIGLEYYGRTV 297
Query: 300 GIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAME 359
IKI+PVGIH+ Q++S+L L + +V EL+ QF + VLLGVDDMDIFKG+ LKLLAME
Sbjct: 298 SIKILPVGIHISQLQSILNLPETQTKVAELRDQFLDQKVLLGVDDMDIFKGISLKLLAME 357
Query: 360 HLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDK 419
LL QHP+ +GR VLVQIANPARGRGKD++E+Q+E AT KRINE FGRPGY+PVV ID
Sbjct: 358 QLLTQHPEKRGRVVLVQIANPARGRGKDVQEVQSETEATVKRINEMFGRPGYQPVVLIDT 417
Query: 420 PVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQG--VXXXXXXXXXXAPKKSMLV 477
P+ ER AYY IAEC +VTAVRDGMNL PYEYI+CRQG A KKSMLV
Sbjct: 418 PLQFFERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNPKLNETIGLDPSAAKKSMLV 477
Query: 478 VSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWA 537
VSEFIGCSPSLSGAIRVNPWNI+A EAM A+ ++EAEKQ+RHEKH++YVSTHDVAYWA
Sbjct: 478 VSEFIGCSPSLSGAIRVNPWNIDAVTEAMDYALIVSEAEKQMRHEKHHKYVSTHDVAYWA 537
Query: 538 RSFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFD 597
RSF QD+ER C DH ++RCWGIG GFRVVALDP+F+KLSI+ IVSAY R+K+RAIL D
Sbjct: 538 RSFIQDLERACGDHVRKRCWGIGFGLGFRVVALDPSFKKLSIEHIVSAYKRTKNRAILLD 597
Query: 598 YDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAE 657
YDGT++ SI P++ I I+N L +D +N V++VSG+ R L +WFS C LG+ AE
Sbjct: 598 YDGTMVQPGSIRTTPTRETIEILNNLSSDPKNIVYLVSGKDRRTLTEWFSSCDDLGLGAE 657
Query: 658 HGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADP 717
HGYF+R + +W+ F W QIAEPVM+LYTE+TDGS IE KE+ALVW+++ ADP
Sbjct: 658 HGYFIRPNDGTDWETSSLVSGFEWKQIAEPVMRLYTETTDGSTIETKETALVWNYQFADP 717
Query: 718 GFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQ 754
FGS QAKEL++HLESVL N+P +VK+GQ +VEVKPQ
Sbjct: 718 DFGSCQAKELMEHLESVLTNDPVSVKTGQQLVEVKPQ 754
|
|
| TAIR|locus:2200216 ATTPS6 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2636 (933.0 bits), Expect = 3.4e-274, P = 3.4e-274
Identities = 502/770 (65%), Positives = 607/770 (78%)
Query: 1 MMSKSYTNLLDLASGNFPAMGPSREKKRLPRVMTVPGVISELDDDQANS----------V 50
M+S+SY+NLL+LASG+ P G R +++PR+M V G++S +D+D ++ V
Sbjct: 1 MVSRSYSNLLELASGDSPTFG--RMNRQIPRIMAVAGIMSNIDNDSKDTDLSPKDRIIIV 58
Query: 51 SSDVPSSVAQDRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPED-MEVIYV 109
++++P AQ RV N + +KGW+FSWDE+SLLLQLKDGL ++ +EVIYV
Sbjct: 59 ANELPIR-AQRRVD--GNGSGSSSSSTCCSKGWNFSWDENSLLLQLKDGLGDEAIEVIYV 115
Query: 110 GSLKVDVDLSEQDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSAT 169
G LK ++ L+EQ++V Q+LL+ FKCVP FLP D+ T++YHGFCKQ LWPLFHYMLP S
Sbjct: 116 GCLKEEIPLNEQEEVYQILLESFKCVPTFLPLDLYTRYYHGFCKQQLWPLFHYMLPLSPD 175
Query: 170 HGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPXXXXXXXXXXXMGF 229
GGRFDR+LW+AYVS NKIF+ R++EVINPEDD+VWIHDYHLMVLP +GF
Sbjct: 176 LGGRFDRTLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGF 235
Query: 230 FLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGY 289
FLHSPFPSSEIY+TLP+REE+L+ALLN+DLIGFHTFDYARHFLSCCSRMLGL Y+SKRGY
Sbjct: 236 FLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGY 295
Query: 290 IGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF--EGKTVLLGVDDMDI 347
IGLEYYGRTV IKI+PVGIHMGQ++SVL L + + +V EL +++ +G+T+LLGVDDMDI
Sbjct: 296 IGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETERKVGELIERYGRKGRTMLLGVDDMDI 355
Query: 348 FKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFG 407
FKG+ LKLLAME LL QHP+WQG+ VLVQIANPARG+GKD++E+QAE ++T KRINETFG
Sbjct: 356 FKGITLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEMQAETYSTVKRINETFG 415
Query: 408 RPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVXXXXXXXX 467
RPGY+P+V ID P+ ER AYY +AEC +VTAVRDGMNL PYEYIV RQG
Sbjct: 416 RPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIVSRQGNEKLDKILK 475
Query: 468 XXAP---KKSMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKH 524
A KKSMLVVSEFIGCSPSLSGAIRVNPWN++A A+AM A+++ E EKQLRHEKH
Sbjct: 476 LEANNRNKKSMLVVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALEVAEPEKQLRHEKH 535
Query: 525 YRYVSTHDVAYWARSFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVS 584
Y+YVSTHDV YWARSF QD+ER+C +H +RRCWGIG FRVVALD +FRKLS++ IVS
Sbjct: 536 YKYVSTHDVGYWARSFLQDLERSCGEHGRRRCWGIGFGLSFRVVALDQSFRKLSMEHIVS 595
Query: 585 AYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGK 644
AY R+K+RAIL DYD T+MPQ SI+K PS I I+NTLC D N VF+VS + R+ L
Sbjct: 596 AYKRTKTRAILLDYDDTLMPQGSIDKRPSSKSIDILNTLCRDKGNLVFIVSAKSRETLSD 655
Query: 645 WFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIK 704
WFSPC+KLGIAAEHGYF+R EW+NC +VD W QIAEPVM+LYTE+TDGS IE K
Sbjct: 656 WFSPCEKLGIAAEHGYFLRLRKAVEWENCVAAVDCSWKQIAEPVMELYTETTDGSTIEDK 715
Query: 705 ESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQ 754
E+ALVW + DADP FGS QAKELLDHLESVLANEP VK GQ VEVKPQ
Sbjct: 716 ETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKRGQNYVEVKPQ 765
|
|
| TAIR|locus:2199847 TPS9 "trehalose-phosphatase/synthase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2543 (900.2 bits), Expect = 2.5e-264, P = 2.5e-264
Identities = 472/758 (62%), Positives = 587/758 (77%)
Query: 1 MMSKSYTNLLDLASGNFPAMGPSREKKRLPRVMTVPGVISELDDDQANSVSSDVPSS-VA 59
M+S+S N LDLAS + + + ++ LPRVMTVPG+ISELD ++ SSDV SS +
Sbjct: 1 MVSRSCANFLDLASWDL--LDFPQTQRALPRVMTVPGIISELDGGYSDG-SSDVNSSNSS 57
Query: 60 QDRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLS 119
++R IIVAN LP++AKR + W FSWDEDSLLLQL+DG D E +Y+GSL D+ +S
Sbjct: 58 RERKIIVANMLPLQAKRDTETGQWCFSWDEDSLLLQLRDGFSSDTEFVYIGSLNADIGIS 117
Query: 120 EQDDVS-QLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSL 178
EQ++VS +LLLD F CVP FLP ++ KFY GFCK HLWPLFHYMLP HG RFDR L
Sbjct: 118 EQEEVSHKLLLD-FNCVPTFLPKEMQEKFYLGFCKHHLWPLFHYMLPMFPDHGDRFDRRL 176
Query: 179 WEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPXXXXXXXXXXXMGFFLHSPFPSS 238
W+AYVSANKIFS RV+EVINPE+DYVWIHDYHLMVLP +GFFLHSPFPSS
Sbjct: 177 WQAYVSANKIFSDRVMEVINPEEDYVWIHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSS 236
Query: 239 EIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRT 298
EIYRTLPVR+++L+ LLN DLIGFHTFDYARHFLSCCSRMLGL+Y+SKRG+IGL+Y+GRT
Sbjct: 237 EIYRTLPVRDDLLRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRT 296
Query: 299 VGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAM 358
V IKI+PVGIHMG++ESVL L +++E+++QF+GK ++LGVDDMDIFKG+ LKL+AM
Sbjct: 297 VFIKILPVGIHMGRLESVLNLPSTAAKMKEIQEQFKGKKLILGVDDMDIFKGISLKLIAM 356
Query: 359 EHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFID 418
E L + + +G+ VL+QI NPAR GKD+EE + E ++T KRINE +G GY+PV+ ID
Sbjct: 357 ERLFETYWHMRGKLVLIQIVNPARATGKDVEEAKKETYSTAKRINERYGSAGYQPVILID 416
Query: 419 KPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGV--XXXXXXXXXXAPKKSML 476
+ V E+ AYY +A+C +V AVRDGMNL PY+YI+CRQG + + SML
Sbjct: 417 RLVPRYEKTAYYAMADCCLVNAVRDGMNLVPYKYIICRQGTPGMDKAMGISHDSARTSML 476
Query: 477 VVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYW 536
VVSEFIGCSPSLSGAIRVNPW+++A AEA++ A+ M E EK+LRHEKHY YVSTHDV YW
Sbjct: 477 VVSEFIGCSPSLSGAIRVNPWDVDAVAEAVNLALTMGETEKRLRHEKHYHYVSTHDVGYW 536
Query: 537 ARSFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILF 596
A+SF QD+ER C++H+ +RCWGIG FRV++L P+FRKLSID IVS Y ++ RAI
Sbjct: 537 AKSFMQDLERACREHYNKRCWGIGFGLSFRVLSLSPSFRKLSIDHIVSTYRNTQRRAIFL 596
Query: 597 DYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAA 656
DYDGT++P++SI K P+ V+S++ +LC D +NTVFVVSGRG + L W SPC+ LGIAA
Sbjct: 597 DYDGTLVPESSIIKTPNAEVLSVLKSLCGDPKNTVFVVSGRGWESLSDWLSPCENLGIAA 656
Query: 657 EHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDAD 716
EHGYF+RWS+ +EW+ C S + W + EPVM+ Y ++TDGS IE KESALVWHH+DAD
Sbjct: 657 EHGYFIRWSSKKEWETCYSSAEAEWKTMVEPVMRSYMDATDGSTIEYKESALVWHHQDAD 716
Query: 717 PGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQ 754
P FG+ QAKELLDHLESVLANEP VK GQ IVEVKPQ
Sbjct: 717 PDFGACQAKELLDHLESVLANEPVVVKRGQHIVEVKPQ 754
|
|
| TAIR|locus:2016179 TPS8 "trehalose-6-phosphatase synthase S8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2513 (889.7 bits), Expect = 3.7e-261, P = 3.7e-261
Identities = 458/754 (60%), Positives = 576/754 (76%)
Query: 1 MMSKSYTNLLDLASGNFPAMGPSREKKRLPRVMTVPGVISELDDDQANSVSSDVPSSVAQ 60
M+S+S N LDL+S + + + + LPRVMTVPG+I+++D D + V+S S ++
Sbjct: 1 MVSRSCANFLDLSSWDL--LDFPQTPRTLPRVMTVPGIITDVDGDTTSEVTST--SGGSR 56
Query: 61 DRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSE 120
+R IIVAN LP+++KR + W F+WDEDSL LQL+DG + E +YVGSL VD++ +E
Sbjct: 57 ERKIIVANMLPLQSKRDAETGKWCFNWDEDSLQLQLRDGFSSETEFLYVGSLNVDIETNE 116
Query: 121 QDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWE 180
Q++VSQ LL+ F CV FL ++ FY GFCK LWPLFHYMLP HG RFDR LW+
Sbjct: 117 QEEVSQKLLEEFNCVATFLSQELQEMFYLGFCKHQLWPLFHYMLPMFPDHGDRFDRRLWQ 176
Query: 181 AYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPXXXXXXXXXXXMGFFLHSPFPSSEI 240
AYVSANKIFS RV+EVINPEDDYVWI DYHLMVLP +GFFLHSPFPSSEI
Sbjct: 177 AYVSANKIFSDRVMEVINPEDDYVWIQDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEI 236
Query: 241 YRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVG 300
YRTLPVR+EIL+ LLN DLIGFHTFDYARHFLSCCSRMLGL+Y+SKRG+IGL+Y+GRTV
Sbjct: 237 YRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVY 296
Query: 301 IKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEH 360
IKI+PVG+HMG++ESVL L + +E+++QF+GK ++LG+DDMDIFKG+ LKL+AMEH
Sbjct: 297 IKILPVGVHMGRLESVLSLDSTAAKTKEIQEQFKGKKLVLGIDDMDIFKGISLKLIAMEH 356
Query: 361 LLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKP 420
L + + +G+ VLVQI NPAR GKD+EE + E + T +RINE +G Y+P+V ID+
Sbjct: 357 LFETYWHLKGKVVLVQIVNPARSSGKDVEEAKRETYETARRINERYGTSDYKPIVLIDRL 416
Query: 421 VTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVXXXXXXXXXXAPKKSMLVVSE 480
V SE+ AYY A+C +V AVRDGMNL PY+YIVCRQG +P+ S LVVSE
Sbjct: 417 VPRSEKTAYYAAADCCLVNAVRDGMNLVPYKYIVCRQGTRSNKAVVDS-SPRTSTLVVSE 475
Query: 481 FIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSF 540
FIGCSPSLSGAIRVNPW+++A AEA++ A++M+E EKQLRHEKHY Y+STHDV YWA+SF
Sbjct: 476 FIGCSPSLSGAIRVNPWDVDAVAEAVNSALKMSETEKQLRHEKHYHYISTHDVGYWAKSF 535
Query: 541 FQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDYDG 600
QD+ER C+DH+ +RCWGIG GFRV++L P+FRKLS++ IV Y +++ RAI DYDG
Sbjct: 536 MQDLERACRDHYSKRCWGIGFGLGFRVLSLSPSFRKLSVEHIVPVYRKTQRRAIFLDYDG 595
Query: 601 TVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGY 660
T++P++SI + PS V+S++ LC D NTVF+VSGRGR+ L W SPC+ LGIAAEHGY
Sbjct: 596 TLVPESSIVQDPSNEVVSVLKALCEDPNNTVFIVSGRGRESLSNWLSPCENLGIAAEHGY 655
Query: 661 FMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFG 720
F+RW + +EW+ C D W + EPVM+ Y E+TDG+ IE KESALVWHH+DADP FG
Sbjct: 656 FIRWKSKDEWETCYSPTDTEWRSMVEPVMRSYMEATDGTSIEFKESALVWHHQDADPDFG 715
Query: 721 SSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQ 754
S QAKE+LDHLESVLANEP VK GQ IVEVKPQ
Sbjct: 716 SCQAKEMLDHLESVLANEPVVVKRGQHIVEVKPQ 749
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| TAIR|locus:2195678 TPS10 "trehalose phosphate synthase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2490 (881.6 bits), Expect = 1.0e-258, P = 1.0e-258
Identities = 462/756 (61%), Positives = 568/756 (75%)
Query: 1 MMSKSYTNLLDLASGNFPAMGPSREKKRLPRVMTVPGVISELDDDQANSVSSDVPSSVAQ 60
M SKS+ NLLDLASG+ + + + LPRVMTVPG+IS++D + SDV S +
Sbjct: 1 MGSKSFGNLLDLASGDL--LDIPQTPRYLPRVMTVPGIISDVDGYGISDGDSDVISLPCR 58
Query: 61 DRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSE 120
+R IIVAN LP+ K+ + W FS D DS LL LKDG + EVIYVGSLK VD+SE
Sbjct: 59 ERKIIVANFLPLNGKKDSETGKWKFSLDNDSPLLHLKDGFSPETEVIYVGSLKTHVDVSE 118
Query: 121 QDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWE 180
QD+VS L + F CV FLP D+ KFY GFCKQ LWPLFHYMLP HG RFDR LW+
Sbjct: 119 QDEVSHNLFEEFNCVATFLPQDVHKKFYLGFCKQQLWPLFHYMLPMCPDHGERFDRGLWQ 178
Query: 181 AYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPXXXXXXXXXXXMGFFLHSPFPSSEI 240
AYVSANKIF+ +V+ VIN E+DY+WIHDYHLMVLP +GFFLHSPFPSSEI
Sbjct: 179 AYVSANKIFADKVMGVINLEEDYIWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEI 238
Query: 241 YRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVG 300
YRTLPVREE+L+ LLN DLIGFHTFDYARHFLSCC RMLGLEY+SKRG+I L+Y GRTV
Sbjct: 239 YRTLPVREELLRGLLNCDLIGFHTFDYARHFLSCCCRMLGLEYESKRGHIALDYLGRTVF 298
Query: 301 IKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEH 360
+KI+P+GIHMG++ESVL L +++E+++++ GK ++LGVDDMDIFKG+ LK+LA EH
Sbjct: 299 LKILPIGIHMGRLESVLNLPATAEKLKEIQEKYRGKKIILGVDDMDIFKGLSLKILAFEH 358
Query: 361 LLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKP 420
LL+Q+P G+ VL+QI NPARG GKD++E + E + T KRINE +G YEPVV ID+P
Sbjct: 359 LLQQYPSMLGKIVLIQIVNPARGSGKDVQEARKETYDTVKRINERYGSHDYEPVVLIDRP 418
Query: 421 VTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVXXXXXXXXXX--APKKSMLVV 478
V E++AYY +AEC +V AVRDGMNL PY+Y VCRQG P+ S LV+
Sbjct: 419 VPRFEKSAYYALAECCIVNAVRDGMNLVPYKYTVCRQGTPSMNKSLGVSDDLPRTSTLVL 478
Query: 479 SEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWAR 538
SEFIGCSPSLSGAIRVNPW+++A A++++ AI M++ EKQLRH+KH+ Y+STHDV YWAR
Sbjct: 479 SEFIGCSPSLSGAIRVNPWDVDAVADSLYSAITMSDFEKQLRHKKHFHYISTHDVGYWAR 538
Query: 539 SFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDY 598
SF QD+ER +DH+ +RCWG+G GFR+VAL PNFR+LSI+ VSAY RS RAI DY
Sbjct: 539 SFSQDLERASRDHYSKRCWGVGWGLGFRLVALSPNFRRLSIEQTVSAYRRSSKRAIFLDY 598
Query: 599 DGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEH 658
DGT++P+TSI K PS VIS + LC+D NT+F+VSGRG+ L +W +PC+ LGIAAEH
Sbjct: 599 DGTLVPETSIVKDPSAEVISALKALCSDPNNTIFIVSGRGKVSLSEWLAPCENLGIAAEH 658
Query: 659 GYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPG 718
GYF RW+ +W+ G S D W ++ EP+M+LYTE+TDGS IE KESALVWHH+DADP
Sbjct: 659 GYFTRWNKSSDWETSGLSDDLEWKKVVEPIMRLYTETTDGSNIEAKESALVWHHQDADPD 718
Query: 719 FGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQ 754
FGS QAKELLDHLE+VL NEP V G IVEVKPQ
Sbjct: 719 FGSCQAKELLDHLETVLVNEPVIVNRGHQIVEVKPQ 754
|
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| TAIR|locus:2054027 TPS11 "trehalose phosphatase/synthase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2333 (826.3 bits), Expect = 4.4e-242, P = 4.4e-242
Identities = 433/758 (57%), Positives = 554/758 (73%)
Query: 1 MMSKSYTNLLDLASGN-FPAMGPSREKKRLPRVMTVPGVISELDDDQANSVSSDVPSSVA 59
M +S+ + L L S + + MG + R+P +T +S L+ D N + V
Sbjct: 1 MSPESWKDQLSLVSADDYRIMG----RNRIPNAVTK---LSGLETDDPNG-----GAWVT 48
Query: 60 QDRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLS 119
+ + I+V+NQLP++A R + W F +D DSL LQLKDG P + EV+YVGSL DV S
Sbjct: 49 KPKRIVVSNQLPLRAHRDISSNKWCFEFDNDSLYLQLKDGFPPETEVVYVGSLNADVLPS 108
Query: 120 EQDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLW 179
EQ+DVSQ LL++F+CVP FLP D+L K+YHGFCK +LWP+FHY+LP + G FDRS W
Sbjct: 109 EQEDVSQFLLEKFQCVPTFLPSDLLNKYYHGFCKHYLWPIFHYLLPMTQAQGSLFDRSNW 168
Query: 180 EAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPXXXXXXXXXXXMGFFLHSPFPSSE 239
AY + NKIF+ ++ EV+NP+DDYVWIHDYHLM+LP +G FLHSPFPSSE
Sbjct: 169 RAYTTVNKIFADKIFEVLNPDDDYVWIHDYHLMILPTFLRNRFHRIKLGIFLHSPFPSSE 228
Query: 240 IYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTV 299
IYRTLPVR+EILK LN DL+GFHTFDYARHFLSCCSRMLGL+Y+SKRGYIGLEY+GRTV
Sbjct: 229 IYRTLPVRDEILKGFLNCDLVGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTV 288
Query: 300 GIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAME 359
IKI+PVGIHMGQIES+ +V+ L+++F+G V+LGVDD+D+FKG+ LK AM
Sbjct: 289 SIKILPVGIHMGQIESIKASEKTAEKVKRLRERFKGNIVMLGVDDLDMFKGISLKFWAMG 348
Query: 360 HLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPG-YEPVVFID 418
LL+Q+ + +G+ VLVQI NPAR GKD+++++ +I+ IN FGRPG Y+P+VFI+
Sbjct: 349 QLLEQNEELRGKVVLVQITNPARSSGKDVQDVEKQINLIADEINSKFGRPGGYKPIVFIN 408
Query: 419 KPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVXXXXXXXXXXAP--KKSML 476
PV+ ++ AYY I+ECVVV AVRDGMNL PY+Y V RQG +KS++
Sbjct: 409 GPVSTLDKVAYYAISECVVVNAVRDGMNLVPYKYTVTRQGSPALDAALGFGEDDVRKSVI 468
Query: 477 VVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYW 536
+VSEFIGCSPSLSGAIRVNPWNI+A AM A+ M++ EK LRH+KH++Y+S+H+VAYW
Sbjct: 469 IVSEFIGCSPSLSGAIRVNPWNIDAVTNAMSSAMTMSDKEKNLRHQKHHKYISSHNVAYW 528
Query: 537 ARSFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILF 596
ARS+ QD++R CKDH+ +R WG+G F+VVALDPNFR+L + IV AY RS SR IL
Sbjct: 529 ARSYDQDLQRACKDHYNKRFWGVGFGLFFKVVALDPNFRRLCGETIVPAYRRSSSRLILL 588
Query: 597 DYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAA 656
DYDGT+M Q +++K PS +IS++N LC+D N VF+VSGRG+D L KWF C LGI+A
Sbjct: 589 DYDGTMMDQDTLDKRPSDDLISLLNRLCDDPSNLVFIVSGRGKDPLSKWFDSCPNLGISA 648
Query: 657 EHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDAD 716
EHGYF RW+++ W+ D W +IA+PVM Y E+TDGS+IE KESA+VWHH++AD
Sbjct: 649 EHGYFTRWNSNSPWETSELPADLSWKKIAKPVMNHYMEATDGSFIEEKESAMVWHHQEAD 708
Query: 717 PGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQ 754
FGS QAKELLDHLESVL NEP VK GQ IVEVKPQ
Sbjct: 709 HSFGSWQAKELLDHLESVLTNEPVVVKRGQHIVEVKPQ 746
|
|
| TAIR|locus:2137712 TPS4 "trehalose-6-phosphatase synthase S4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 967 (345.5 bits), Expect = 2.5e-97, P = 2.5e-97
Identities = 230/692 (33%), Positives = 378/692 (54%)
Query: 76 RRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDV-DLSEQDDVSQLLLDRFKC 134
+R + WSF+ L+ L GL E E ++G VDV D + +S L ++ C
Sbjct: 18 KRTGEESWSFTMSPGGLVSALL-GLKE-FETKWIGWPGVDVHDAIGKKTLSITLAEK-GC 74
Query: 135 VPAFLPPDILTKFYHGFCKQHLWPLFHYM-LPFSATHGGRFD-RSLWEAYVSANKIFSQR 192
+P FL ++ ++Y+G+C LWP+FHY+ P + +S +EAY AN+IF
Sbjct: 75 IPVFLE-EVCDQYYNGYCNNILWPIFHYLGTPPEYRNDATITYQSQYEAYKKANQIFFD- 132
Query: 193 VIEVINPEDDYVWIHDYHLMVLPXXXXXXXXXXXMGFFLHSPFPSSEIYRTLPVREEILK 252
V++ E D VW HDYH+M+LP +G+FLH+PFPSSE+Y+TLP R ++L+
Sbjct: 133 VVKEHYEEGDVVWCHDYHVMLLPQYLKEYNSKMKVGWFLHTPFPSSEMYKTLPSRSDLLR 192
Query: 253 ALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQ 312
++L ADL+GFHT+D+ARHFL+ C +LG+E S+ G+ G+ + + P+GI +
Sbjct: 193 SVLTADLVGFHTYDFARHFLNACMCILGVEATSE----GIVDQGKVTRVAVFPIGIEPER 248
Query: 313 IESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRA 372
+ L++ +++ K F G+ ++LGVD +D KG+ K A E L+++ +W+G+
Sbjct: 249 FINTSELSEVVQYMKKFKNDFGGRKLILGVDRLDTIKGIPQKYQAFEKFLEENAEWRGKV 308
Query: 373 VLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTI 432
+L+QIA P R + ++I+ + H RIN FG P++ +D + ++ A Y I
Sbjct: 309 MLLQIAVPTRNGIGEYQKIKDQCHYHVGRINGRFGSISSVPIIHLDCSIDFNQLCALYAI 368
Query: 433 AECVVVTAVRDGMNLTPYEYIVCRQGVXXXXXXXXXXAPKKSMLVVSEFIGCSPSL-SGA 491
+ ++VT++RDGMNL E+I C++ +K +L++SEF G SL +GA
Sbjct: 369 TDVLLVTSLRDGMNLVSSEFIACQKA-------------EKGVLILSEFAGAGQSLGAGA 415
Query: 492 IRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERTCKDH 551
I VNPWNI+ + A+ EA+ M+ EK+ +H+ +++YV TH WA F M+ T +
Sbjct: 416 ILVNPWNIKEVSSAIGEALNMSHEEKERKHKINFQYVKTHSTQQWADDF---MKLTLTNI 472
Query: 552 FKRRCWGIGLS--FGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDYDGTV-MPQTSI 608
+ I S G + A +L ++ Y +S +R ++ + GT+ P +
Sbjct: 473 LCSKLIEITTSAELGAGLAAT----LELPEHDVIQQYSKSNNRLLILGFYGTLTQPMKNQ 528
Query: 609 NKAPSQAVISI-------INTLCNDARNTVFVVSGRGRDC-LGKWFSPCKKLGIAAEHGY 660
+ + + + LC+D + TV V+S R C L K F + +AAE+G
Sbjct: 529 ERRGDGMNLELHPQLKERLKELCSDPKTTVVVLS-RSEKCILDKNFGEYN-MWLAAENGM 586
Query: 661 FMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFG 720
F+R ++ E + ++ WI + V K +TE T GSY+E E++LVW++ +AD FG
Sbjct: 587 FLRHTSGEWVTRIPEHMNLEWIDGVKHVFKYFTERTPGSYLETSEASLVWNYENADAEFG 646
Query: 721 SSQAKELLDHL-ESVLANEPAAVKSGQFIVEV 751
+QA+++L HL ++N V G VEV
Sbjct: 647 RAQARDMLQHLWAGPISNASVDVVRGGQSVEV 678
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| UNIPROTKB|G4N8C1 MGG_03441 "Trehalose-phosphatase" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 602 (217.0 bits), Expect = 8.2e-94, Sum P(3) = 8.2e-94
Identities = 133/388 (34%), Positives = 215/388 (55%)
Query: 151 FCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYH 210
F + L+ LFHY + GR +R W Y N+ F+ ++IE P D V IHD++
Sbjct: 307 FAEHELYNLFHYKQ--HEPNDGRKERVQWADYYRMNQKFANKIIENYKP-GDIVIIHDFY 363
Query: 211 LMVLPXXXXXXXXXXXMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARH 270
LM+LP + FFLHSPFPSSE +R LP R+E+L+ +L +++IGF ++ Y+RH
Sbjct: 364 LMLLPSMLRQRAPHIYIAFFLHSPFPSSEFFRCLPRRKEVLEGVLGSNMIGFQSYSYSRH 423
Query: 271 FLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELK 330
F SCC+R+LG + ++ G+ YG V + + P+GI ++E + + VQ+L+
Sbjct: 424 FSSCCTRILGYKSDAR----GVNVYGSRVEVGVFPIGIDAKKVEQLAWSDSVNKLVQQLQ 479
Query: 331 QQF-EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPAR-GRGKDL 388
Q +G+ +++G D +D GV KL A E L+ +P+W+ + VL+Q+ +P KD
Sbjct: 480 TQTTQGRKLIVGRDRLDSVHGVAQKLKAFERFLENYPEWRDKVVLIQVTSPTSIEEEKDE 539
Query: 389 EEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLT 448
++ ++ +IN +G G+EPV + + E A A+ ++T+VRDGMN T
Sbjct: 540 SKVSTLVNELVLKINGMYGGLGFEPVRHFSQYIGQDEYFALLRGADIGLITSVRDGMNTT 599
Query: 449 PYEYIVCRQGVXXXXXXXXXXAPKKSMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHE 508
EY+VC++ P L++SEF G + SL+ AI +NPW+ A A+ ++
Sbjct: 600 SMEYVVCQRD---------SHGP----LILSEFSGTAGSLTDAIHINPWDFSAVADEINR 646
Query: 509 AIQMNEAEKQLRHEKHYRYVSTHDVAYW 536
A+ M ++Q K Y +V+T V W
Sbjct: 647 ALTMPPHKRQEMQTKLYEHVTTKTVHEW 674
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| DICTYBASE|DDB_G0287657 tpsA "alpha,alpha-trehalose-phosphate synthase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 930 (332.4 bits), Expect = 2.1e-93, P = 2.1e-93
Identities = 183/485 (37%), Positives = 289/485 (59%)
Query: 62 RVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSEQ 121
R+I+V+N+LPV K+ + K WS L+ L GL + I+VG + +++ ++
Sbjct: 17 RLIVVSNRLPVSIKKESNGK-WSCKMSSGGLVAALS-GLKSNF--IWVGWIGAEIEEDDR 72
Query: 122 DDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEA 181
++ +LL + C+P FL + + Y+GF LWPLFHY LP +D +W +
Sbjct: 73 KEIKELLWKDYSCIPVFLSEKVANEHYNGFSNGVLWPLFHY-LPGDLD----YDDRIWNS 127
Query: 182 YVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPXXXXXXXXXXXMGFFLHSPFPSSEIY 241
YV AN+ FS V E++ P +D VW+HDYH+M+LP +GFFLH PFPSSEI+
Sbjct: 128 YVEANEQFSSVVAEILKP-NDLVWVHDYHMMLLPEILKQKKPDARIGFFLHIPFPSSEIF 186
Query: 242 RTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGI 301
R LP R+EIL +LN LIGFHT+DYARHFL C+R++GLE G+ + R V +
Sbjct: 187 RVLPCRKEILLGILNCCLIGFHTYDYARHFLKSCTRIVGLETAPN----GVYFKDRFVQV 242
Query: 302 KIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHL 361
+ PVGI + L+ R++ELK+ FEG VL+G+D +D KG+ KL A+E L
Sbjct: 243 GVFPVGIDPDKFFESLKTTQVQNRIKELKESFEGTKVLIGIDRLDYIKGIPQKLQAIERL 302
Query: 362 LKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPV 421
+++P+W+G+ VL+Q+A P+R ++ ++++ E+ RIN +G GY P+ ++ + V
Sbjct: 303 FQKYPEWKGKLVLIQVAVPSRQDVEEYQKLKKEVEELVGRINGLYGSIGYSPIHYLFQSV 362
Query: 422 TLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVXXXXXXXXXXAPKKSMLVVSEF 481
SE A Y I++ ++T++RDGMNL EYIVC+ +L++SEF
Sbjct: 363 DPSELTALYNISDAALITSIRDGMNLVAQEYIVCQ-------------TENNGVLILSEF 409
Query: 482 IGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFF 541
G + SLSGA+ +NPWN E A+++H ++ M E++ +H+ +YV+ H ++W F
Sbjct: 410 TGAAQSLSGAVMINPWNTEEVADSIHNSLLMPPEEREEKHQMLLKYVTKHTASHWGLGFV 469
Query: 542 QDMER 546
+++ +
Sbjct: 470 KELNK 474
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9LMI0 | TPS7_ARATH | 2, ., 4, ., 1, ., 1, 5 | 0.7705 | 0.9829 | 0.8789 | yes | no |
| Q54K57 | TPSA_DICDI | 2, ., 4, ., 1, ., 1, 5 | 0.3674 | 0.8252 | 0.8567 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.4.1 | 0.976 |
| 4th Layer | 2.4.1.15 | 0.991 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | eugene3.00110684 | hypothetical protein (853 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | fgenesh4_pg.C_scaffold_9882000001 | annotation not avaliable (198 aa) | • | • | • | 0.908 | |||||
 | gw1.IV.2527.1 | trehalose-6-phosphate synthase (769 aa) | • | • | • | • | 0.906 | ||||
 | fgenesh4_pg.C_LG_III000738 | hypothetical protein (861 aa) | • | • | • | • | 0.902 | ||||
 | eugene3.00440223 | UTP--glucose-1-phosphate uridylyltransferase (EC-2.7.7.9) (469 aa) | • | • | 0.901 | ||||||
 | fgenesh4_pg.C_LG_III001208 | alpha,alpha-trehalase (EC-3.2.1.28) (568 aa) | • | • | 0.900 | ||||||
 | estExt_fgenesh4_pg.C_LG_III1199 | alpha,alpha-trehalase (EC-3.2.1.28) (568 aa) | • | • | 0.900 | ||||||
 | estExt_fgenesh4_pg.C_LG_I0760 | alpha,alpha-trehalase (EC-3.2.1.28) (566 aa) | • | • | 0.900 | ||||||
 | gw1.XIII.3112.1 | hypothetical protein (1020 aa) | • | 0.899 | |||||||
 | gw1.XIII.2344.1 | hypothetical protein (409 aa) | • | 0.899 | |||||||
 | gw1.5051.2.1 | hypothetical protein (250 aa) | • | 0.899 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 761 | |||
| PLN02205 | 854 | PLN02205, PLN02205, alpha,alpha-trehalose-phosphat | 0.0 | |
| pfam00982 | 470 | pfam00982, Glyco_transf_20, Glycosyltransferase fa | 0.0 | |
| cd03788 | 460 | cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase ( | 0.0 | |
| PRK14501 | 726 | PRK14501, PRK14501, putative bifunctional trehalos | 0.0 | |
| PLN03063 | 797 | PLN03063, PLN03063, alpha,alpha-trehalose-phosphat | 1e-158 | |
| PLN03064 | 934 | PLN03064, PLN03064, alpha,alpha-trehalose-phosphat | 1e-155 | |
| TIGR02400 | 456 | TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-p | 1e-145 | |
| COG0380 | 486 | COG0380, OtsA, Trehalose-6-phosphate synthase [Car | 1e-141 | |
| TIGR02398 | 487 | TIGR02398, gluc_glyc_Psyn, glucosylglycerol-phosph | 4e-66 | |
| PRK10117 | 474 | PRK10117, PRK10117, trehalose-6-phosphate synthase | 9e-60 | |
| pfam02358 | 235 | pfam02358, Trehalose_PPase, Trehalose-phosphatase | 2e-54 | |
| COG1877 | 266 | COG1877, OtsB, Trehalose-6-phosphatase [Carbohydra | 2e-29 | |
| TIGR00685 | 244 | TIGR00685, T6PP, trehalose-phosphatase | 1e-14 | |
| TIGR01484 | 204 | TIGR01484, HAD-SF-IIB, HAD-superfamily hydrolase, | 1e-05 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 3e-04 | |
| pfam00534 | 158 | pfam00534, Glycos_transf_1, Glycosyl transferases | 0.001 |
| >gnl|CDD|177855 PLN02205, PLN02205, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 1211 bits (3133), Expect = 0.0
Identities = 537/761 (70%), Positives = 635/761 (83%), Gaps = 9/761 (1%)
Query: 1 MMSKSYTNLLDLASGNFPAMGPSREKKRLPRVMTVPGVISELDDDQANSVSSDVPSSVAQ 60
M+S+SY+NLL+LASG P+ G R +R+PR+MTV G++S++DDD + SV SD SS
Sbjct: 1 MVSRSYSNLLELASGESPSFG--RMNRRIPRIMTVAGIMSDIDDDPSESVCSDPSSSSVP 58
Query: 61 -DRVIIVANQLPVKAKRRPD-NKGWSFSWDEDSLLLQLKDGLPED-MEVIYVGSLKVDVD 117
DR+IIVANQLP++A+R+ D +KGW FSWDE+SLLLQLKDGL +D +EVIYVG LK ++
Sbjct: 59 KDRIIIVANQLPIRAQRKSDGSKGWIFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIH 118
Query: 118 LSEQDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRS 177
L+EQ++VSQ+LL+ FKCVP FLPPD+ T++YHGFCKQ LWPLFHYMLP S GGRF+RS
Sbjct: 119 LNEQEEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRS 178
Query: 178 LWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPS 237
LW+AYVS NKIF+ R++EVINPEDD+VWIHDYHLMVLPTFLR+RF R+++GFFLHSPFPS
Sbjct: 179 LWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPS 238
Query: 238 SEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGR 297
SEIY+TLP+REE+L+ALLN+DLIGFHTFDYARHFLSCCSRMLGL Y+SKRGYIGLEYYGR
Sbjct: 239 SEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGR 298
Query: 298 TVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF--EGKTVLLGVDDMDIFKGVDLKL 355
TV IKI+PVGIHMGQ++SVL L + + +V+EL +QF + + +LLGVDDMDIFKG+ LKL
Sbjct: 299 TVSIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKL 358
Query: 356 LAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVV 415
LAME LL QHP+WQG+ VLVQIANPARG+GKD++E+QAE H+T KRINETFG+PGY+P+V
Sbjct: 359 LAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIV 418
Query: 416 FIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSES--SSESSAPKK 473
ID P+ ER AYY +AEC +VTAVRDGMNL PYEYI+ RQG + E S PKK
Sbjct: 419 LIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKK 478
Query: 474 SMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDV 533
SMLVVSEFIGCSPSLSGAIRVNPWNI+A A+AM A++M E EKQLRHEKHYRYVSTHDV
Sbjct: 479 SMLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDV 538
Query: 534 AYWARSFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRA 593
YWARSF QD+ERTC+DH +RRCWGIG FRVVALDPNFRKLS++ IVSAY R+ +RA
Sbjct: 539 GYWARSFLQDLERTCRDHSRRRCWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRA 598
Query: 594 ILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLG 653
IL DYDGT+MPQ SI+K+PS I I+NTLC D N VF+VS R R L WFSPC+KLG
Sbjct: 599 ILLDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLG 658
Query: 654 IAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHR 713
IAAEHGYF+R D EW+ C D W QIAEPVM+LYTE+TDGS IE KE+ALVW +
Sbjct: 659 IAAEHGYFLRLKRDVEWETCVPVADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYE 718
Query: 714 DADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQ 754
DADP FGS QAKELLDHLESVLANEP VKSGQ IVEVKPQ
Sbjct: 719 DADPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQ 759
|
Length = 854 |
| >gnl|CDD|216227 pfam00982, Glyco_transf_20, Glycosyltransferase family 20 | Back alignment and domain information |
|---|
Score = 665 bits (1719), Expect = 0.0
Identities = 236/489 (48%), Positives = 325/489 (66%), Gaps = 24/489 (4%)
Query: 62 RVIIVANQLPVKAKRRPDNKGWSFSWDEDSL-LLQLKDGLPEDMEVIYVGSLKVDVDLSE 120
R+++V+N+LPV AKR + K W FS S L+ +GL E E ++VG V VD E
Sbjct: 2 RLVVVSNRLPVTAKREEEGK-WEFSIKMSSGGLVSALNGLSEATEGVWVGWPGVPVDEDE 60
Query: 121 -QDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLW 179
+D VSQLL ++F CVP FL + + ++Y+GF LWPLFHY LP + + FDRS W
Sbjct: 61 PKDRVSQLLKEKFTCVPVFLDDEDVDEYYNGFSNSILWPLFHYRLPPN--NEDEFDRSWW 118
Query: 180 EAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSE 239
+AYV NK+F+ +++EV D +W+HDYHLM+LP LR+R ++GFFLH PFPSSE
Sbjct: 119 DAYVKVNKLFADKIVEVYKD-GDLIWVHDYHLMLLPQMLRKRLPDAKIGFFLHIPFPSSE 177
Query: 240 IYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTV 299
I+R LPVREEIL+ LL ADLIGFHT+DYARHFLSCCSR+LGLE S G+EY GRTV
Sbjct: 178 IFRCLPVREEILRGLLGADLIGFHTYDYARHFLSCCSRLLGLETTSDG---GVEYGGRTV 234
Query: 300 GIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKT-VLLGVDDMDIFKGVDLKLLAM 358
+ P+GI G+IES L+ +V+ELK++F K ++LGVD +D KG+ KLLA
Sbjct: 235 SVGAFPIGIDPGRIESGLKSPSVQEKVKELKERFGNKKKLILGVDRLDYIKGIPQKLLAF 294
Query: 359 EHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFID 418
E L+++P+W+G+ VLVQIA P+RG ++ + +++++ RIN FG Y PV +
Sbjct: 295 ERFLEEYPEWRGKVVLVQIAVPSRGDVEEYQNLRSQVEELVGRINGEFGTLDYTPVHHLH 354
Query: 419 KPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVV 478
+ + E A Y IA+ +VT++RDGMNL YEY+ C+Q +K +L++
Sbjct: 355 RSLDFDELIALYAIADVCLVTSLRDGMNLVAYEYVACQQD-------------RKGVLIL 401
Query: 479 SEFIGCSPSL-SGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWA 537
SEF G + SL GAI VNPW+IE AEA++EA+ M+E E+Q RH K ++Y+S HDV YWA
Sbjct: 402 SEFAGAAQSLNDGAILVNPWDIEEVAEAINEALTMSEEERQKRHRKLFKYISKHDVQYWA 461
Query: 538 RSFFQDMER 546
SF D++R
Sbjct: 462 ESFLSDLKR 470
|
Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. Length = 470 |
| >gnl|CDD|99963 cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Score = 597 bits (1543), Expect = 0.0
Identities = 200/484 (41%), Positives = 283/484 (58%), Gaps = 24/484 (4%)
Query: 62 RVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSEQ 121
R+++V+N+LPV +R D G + L GL + ++VG ++ D E+
Sbjct: 1 RLVVVSNRLPVSIERDGD--GEFEARRSAGGLATALKGLLKRTGGLWVGWSGIEEDEEEE 58
Query: 122 DDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEA 181
D+VS LL + P FL P+ +Y+GF + LWPLFHY L RFDR WEA
Sbjct: 59 DEVSTELLGEYTVAPVFLSPEEFEGYYNGFSNEVLWPLFHYRLDL-----ARFDREDWEA 113
Query: 182 YVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIY 241
YV N+ F+ + EV+ P D VW+HDYHL++LP LR R R+GFFLH PFPSSEI+
Sbjct: 114 YVRVNRKFADAIAEVLRP-GDLVWVHDYHLLLLPQMLRERGPDARIGFFLHIPFPSSEIF 172
Query: 242 RTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGI 301
R LP REE+L+ LL ADLIGF T YAR+FLSCCSR+LGLE G+EY GR V +
Sbjct: 173 RCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTD---DGGVEYGGRRVRV 229
Query: 302 KIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHL 361
P+GI + + R EL+++ G+ +++GVD +D KG+ +LLA E L
Sbjct: 230 GAFPIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERL 289
Query: 362 LKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPV 421
L+++P+W+G+ VLVQIA P+R + +E++ E+ RIN FG + PV ++ + +
Sbjct: 290 LERYPEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSL 349
Query: 422 TLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEF 481
E AA Y A+ +VT +RDGMNL EY+ C+ +L++SEF
Sbjct: 350 PREELAALYRAADVALVTPLRDGMNLVAKEYVACQD-------------DDPGVLILSEF 396
Query: 482 IGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFF 541
G + LSGA+ VNP++I+ A+A+H A+ M E++ RH K YV THDV WA SF
Sbjct: 397 AGAAEELSGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFL 456
Query: 542 QDME 545
D+
Sbjct: 457 DDLA 460
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. Length = 460 |
| >gnl|CDD|184712 PRK14501, PRK14501, putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Score = 546 bits (1409), Expect = 0.0
Identities = 234/697 (33%), Positives = 362/697 (51%), Gaps = 48/697 (6%)
Query: 62 RVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVG--SLKVDVDLS 119
R+IIV+N+LPV R G + L L+ E ++VG L ++ +
Sbjct: 2 RLIIVSNRLPVTVVREDG--GVELTPSVGGLATGLR-SFHERGGGLWVGWPGLDLEEESE 58
Query: 120 EQDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLW 179
EQ + L+ VP FL + + ++Y GFC LWPLFHY ++ F+ W
Sbjct: 59 EQRARIEPRLEELGLVPVFLSAEEVDRYYEGFCNSTLWPLFHYFPEYTE-----FEDRFW 113
Query: 180 EAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSE 239
E+Y N+ F++ + + P D VW+HDY LM+LP LR R R+GFFLH PFPS E
Sbjct: 114 ESYERVNQRFAEAIAAIARP-GDVVWVHDYQLMLLPAMLRERLPDARIGFFLHIPFPSFE 172
Query: 240 IYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTV 299
++R LP REEIL+ LL ADLIGFHT+DY RHFLS R+LG E + +G GR V
Sbjct: 173 VFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELGEIRLG----GRIV 228
Query: 300 GIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAME 359
+ P+GI + + + + ++ L+Q G+ ++L +D +D KG+ +LLA E
Sbjct: 229 RVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFE 288
Query: 360 HLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDK 419
L+++P+W+G+ LVQ+A P+R +E++ EI RIN FG + P+ + +
Sbjct: 289 RFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYR 348
Query: 420 PVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVS 479
+ E A Y A+ +VT +RDGMNL EY+ R +L++S
Sbjct: 349 SLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTD-------------GDGVLILS 395
Query: 480 EFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARS 539
E G + L+ A+ VNP +IE A A+ A++M E E++ R + + +DV WA
Sbjct: 396 EMAGAAAELAEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKWASD 455
Query: 540 FFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDYD 599
F ++ + + F + P + + I++ Y + R +L DYD
Sbjct: 456 FLDELREAAEKNKA-----------FASKPITPA----AAEEIIARYRAASRRLLLLDYD 500
Query: 600 GTVMPQTSI--NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAE 657
GT++P P + + ++ L D V ++SGR RD L +WF + + AE
Sbjct: 501 GTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGD-LPIHLVAE 559
Query: 658 HGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADP 717
HG + R + EWQ + V W P+++ + + T GS+IE KE++L WH+R+ADP
Sbjct: 560 HGAWSR-APGGEWQLL-EPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADP 617
Query: 718 GFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQ 754
G ++A EL+ L S+L+N P V G +VEV+P
Sbjct: 618 ELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPA 654
|
Length = 726 |
| >gnl|CDD|215555 PLN03063, PLN03063, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 478 bits (1231), Expect = e-158
Identities = 248/708 (35%), Positives = 395/708 (55%), Gaps = 55/708 (7%)
Query: 59 AQDRVIIVANQLPVKAKRRPDNKGWSFSWDED---SLLLQLKDGLPEDMEVIYVGSLKVD 115
+ R+++VAN+LPV AKR ++ WS S LL +K+ E ++G VD
Sbjct: 9 ERPRLLVVANRLPVSAKRTGEDS-WSLEMSPGGLVSALLGVKE-----FETKWIGWPGVD 62
Query: 116 V-DLSEQDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYM-LPFSATHGG- 172
V D + +++ L ++ C+P FL ++ ++Y+G+C LWP+FHYM LP H
Sbjct: 63 VHDEIGKAALTESLAEK-GCIPVFLN-EVFDQYYNGYCNNILWPIFHYMGLPQEDRHDAT 120
Query: 173 RFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLH 232
R S ++AY AN++F V E E D VW HDYHLM LP +L+ ++++G+FLH
Sbjct: 121 RTFESQYDAYKKANRMFLDVVKENYE-EGDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLH 179
Query: 233 SPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGL 292
+PFPSSEIY+TLP R E+L+A+L ADLIGFHT+D+ARHFLS C+R+LG+E + G+
Sbjct: 180 TPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHE----GV 235
Query: 293 EYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVD 352
G+ + + P+GI + + L + ++ELK+ F G+ V+LGVD +D+ KG+
Sbjct: 236 VDQGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIP 295
Query: 353 LKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYE 412
K LA E L+++P+W+ + +LVQIA P R + +++++++H RIN FG
Sbjct: 296 QKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSV 355
Query: 413 PVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPK 472
P+ +D V + A Y I + ++VT++RDGMNL YE++ C++ K
Sbjct: 356 PIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKA-------------K 402
Query: 473 KSMLVVSEFIGCSPSL-SGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTH 531
K +LV+SEF G SL +GA+ VNPWNI + A+ EA+ M++ E++ RH +++YV TH
Sbjct: 403 KGVLVLSEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTH 462
Query: 532 DVAYWARSFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKS 591
WA F ++ I + R + L ++ Y +S +
Sbjct: 463 SAQKWADDFMSELN------------DIIVEAELRTRNIPLE---LPEQDVIQQYSKSNN 507
Query: 592 RAILFDYDGTVM-PQTSINKAPS----QAVISIINTLCNDARNTVFVVSGRGRDCLGKWF 646
R ++ + GT+ P+ S K + + LC+D + TV V+S G+D L K F
Sbjct: 508 RLLILGFYGTLTEPRNSQIKEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNF 567
Query: 647 SPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKES 706
+ +AAE+G F+R ++ E + ++ W+ + V K +T+ T SY+E E+
Sbjct: 568 GE-YNIWLAAENGMFLRHTSGEWVTTMPEHMNLDWVDGVKNVFKYFTDRTPRSYVEKSET 626
Query: 707 ALVWHHRDADPGFGSSQAKELLDHL-ESVLANEPAAVKSGQFIVEVKP 753
+LVW++ AD FG +QA+++L HL ++N V GQ VEV
Sbjct: 627 SLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHA 674
|
Length = 797 |
| >gnl|CDD|215556 PLN03064, PLN03064, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 476 bits (1226), Expect = e-155
Identities = 244/714 (34%), Positives = 397/714 (55%), Gaps = 66/714 (9%)
Query: 62 RVIIVANQLPVKAKRRPDNKGWSFSWDEDSL---LLQLKDGLPEDMEVIYVGSLKVDV-D 117
R+++VAN+LPV A RR ++ WS L LL +K+ E ++G V+V D
Sbjct: 95 RLLVVANRLPVSAVRRGEDS-WSLEISAGGLVSALLGVKE-----FEARWIGWAGVNVPD 148
Query: 118 LSEQDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYM-LPF----SATHGG 172
Q +++ L ++ +C+P FL +I+ ++Y+G+C LWPLFHY+ LP + T
Sbjct: 149 EVGQKALTKALAEK-RCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATT--- 204
Query: 173 RFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLH 232
R +S + AY AN++F+ V E E D VW HDYHLM LP L+ + +++G+FLH
Sbjct: 205 RSFQSQFAAYKKANQMFADVVNEHYE-EGDVVWCHDYHLMFLPKCLKEYNSNMKVGWFLH 263
Query: 233 SPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGL 292
+PFPSSEI+RTLP R E+L+++L ADL+GFHT+DYARHF+S C+R+LGLE + G+
Sbjct: 264 TPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPE----GV 319
Query: 293 EYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVD 352
E GR + P+GI + L ++ELK++F G+ V+LGVD +D+ KG+
Sbjct: 320 EDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFAGRKVMLGVDRLDMIKGIP 379
Query: 353 LKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYE 412
K+LA E L+++P+W+ + VL+QIA P R + +++ +++H RIN FG
Sbjct: 380 QKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAV 439
Query: 413 PVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPK 472
P+ +D+ + A Y + + +VT++RDGMNL YE++ C+ K
Sbjct: 440 PIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQ-------------DSK 486
Query: 473 KSMLVVSEFIGCSPSL-SGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTH 531
K +L++SEF G + SL +GAI VNPWNI A ++ +A+ M E E++ RH ++ +V+TH
Sbjct: 487 KGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTH 546
Query: 532 DVAYWARSFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKS 591
WA +F ++ T + R + P +L + + YL+S +
Sbjct: 547 TAQEWAETFVSELNDTV------------VEAQLRTRQVPP---QLPPEDAIQRYLQSNN 591
Query: 592 RAILFDYDGTV-MPQTSINKAPSQ----------AVISIINTLCNDARNTVFVVSGRGRD 640
R ++ ++ T+ P + + Q + + LC+D + T+ V+SG R
Sbjct: 592 RLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRS 651
Query: 641 CLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSY 700
L + F + +AAE+G F+R + E + ++ W+ + V + +TE T S+
Sbjct: 652 VLDENFGEF-DMWLAAENGMFLRHTKGEWMTTMPEHLNMDWVDSVKHVFEYFTERTPRSH 710
Query: 701 IEIKESALVWHHRDADPGFGSSQAKELLDHL-ESVLANEPAAVKSGQFIVEVKP 753
E +E++LVW+++ AD FG QA+++L HL ++N V G VEV+P
Sbjct: 711 FETRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRP 764
|
Length = 934 |
| >gnl|CDD|233848 TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 432 bits (1112), Expect = e-145
Identities = 175/487 (35%), Positives = 269/487 (55%), Gaps = 33/487 (6%)
Query: 62 RVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDV-DLSE 120
R+I+V+N+LPV R G S L + L L + ++ G V +
Sbjct: 1 RLIVVSNRLPVPITR----GGLEPS--AGGLAVALLGAL-KATGGVWFGWSGKTVEEDEG 53
Query: 121 QDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWE 180
+ + L + P FL + + +Y+GF LWPLFHY R+DR WE
Sbjct: 54 EPFLRTELEGKITLAPVFLSEEDVDGYYNGFSNSTLWPLFHYRPDLI-----RYDRKAWE 108
Query: 181 AYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEI 240
AY N++F++ + ++ P D VW+HDYHLM+LP LR + ++GFFLH PFPSSEI
Sbjct: 109 AYRRVNRLFAEALAPLLQP-GDIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIPFPSSEI 167
Query: 241 YRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVG 300
YRTLP R E+L+ LL DL+GF T+D AR+FLS SR LGLE G+E GRTV
Sbjct: 168 YRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPN----GVESGGRTVR 223
Query: 301 IKIMPVGIHMGQI-ESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAME 359
+ P+GI + + E + + + R+ EL++ +G+ +++GVD +D KG+ +LLA E
Sbjct: 224 VGAFPIGIDVDRFAEQAKKPSVQK-RIAELRESLKGRKLIIGVDRLDYSKGLPERLLAFE 282
Query: 360 HLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDK 419
L++HP+W+G+ VLVQIA P+RG + ++++ ++ RIN FG + P+ ++++
Sbjct: 283 RFLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNR 342
Query: 420 PVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVS 479
E A Y A+ +VT +RDGMNL EY+ + PK +L++S
Sbjct: 343 SYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQD-------------PKDGVLILS 389
Query: 480 EFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARS 539
EF G + L+GA+ VNP++I+ A+A+ A+ M E++ RH + +DV W
Sbjct: 390 EFAGAAQELNGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWRED 449
Query: 540 FFQDMER 546
F D+
Sbjct: 450 FLSDLNS 456
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsible for synthesis of only trace amounts of trehalose while the majority is synthesized by the TreYZ pathway; the significance of OtsA in this species is unclear (see Wolf, et al., PMID:12890033) [Cellular processes, Adaptations to atypical conditions]. Length = 456 |
| >gnl|CDD|223457 COG0380, OtsA, Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 425 bits (1094), Expect = e-141
Identities = 177/486 (36%), Positives = 270/486 (55%), Gaps = 23/486 (4%)
Query: 62 RVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSEQ 121
R+I+V+N+LPVK D L+ LK L ++G E
Sbjct: 16 RLIVVSNRLPVKKTPEGDKGIEFGKRSAGGLVTALK-PLLRVDGGTWIGWSGTTGPTDES 74
Query: 122 DDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEA 181
D + + F P L + +Y+GF LWPLFHY + ++R+ W+A
Sbjct: 75 SDDLKERIGEFTSAPVILSDEDYEGYYNGFSNAILWPLFHYFIDD-----VAYERNWWDA 129
Query: 182 YVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIY 241
YV N+ F+ +++E+ P D +W+HDYHL+++P LR R ++GFFLH PFPSSE++
Sbjct: 130 YVKVNRKFADKIVEIYEP-GDIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPSSEVF 188
Query: 242 RTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGI 301
R LP REEIL+ LL ADLIGF T YAR+FL CSR+LG+ + + G GR V +
Sbjct: 189 RCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGDADIRFNG--ADGRIVKV 246
Query: 302 KIMPVGIHMGQIESVLRLADKDWRVQELKQQFEG-KTVLLGVDDMDIFKGVDLKLLAMEH 360
P+GI + E L+ +V ELK + K +++GVD +D KG+ +LLA E
Sbjct: 247 GAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFER 306
Query: 361 LLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKP 420
LL+++P+W+G+ VL+QIA P+R ++ + ++ +I RIN FG + PV ++ +
Sbjct: 307 LLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRD 366
Query: 421 VTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSE 480
+ +E A Y A+ ++VT +RDGMNL EY+ ++ K +L++SE
Sbjct: 367 LDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQRD-------------KPGVLILSE 413
Query: 481 FIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSF 540
F G + L A+ VNPW+ + A+A+ A+ M+ E++ RHEK + V THDVA WA SF
Sbjct: 414 FAGAASELRDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHDVARWANSF 473
Query: 541 FQDMER 546
D+ +
Sbjct: 474 LDDLAQ 479
|
Length = 486 |
| >gnl|CDD|131451 TIGR02398, gluc_glyc_Psyn, glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Score = 227 bits (579), Expect = 4e-66
Identities = 121/423 (28%), Positives = 204/423 (48%), Gaps = 42/423 (9%)
Query: 139 LPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVIN 198
L + + FYH K+ WP+ H + +F W+ ++ N+ F++
Sbjct: 77 LSKEQVDIFYHITSKEAFWPILH-----TFPERFQFREDDWQVFLKVNRAFAEAACLEAA 131
Query: 199 PEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNAD 258
E VW+HDY+L ++P ++R+ L++ FF H+PFPS++++ LP RE+I+ +LL D
Sbjct: 132 -EGATVWVHDYNLWLVPGYIRQLRPDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCD 190
Query: 259 LIGFHTFDYARHFLSCCSRMLGLEYQSK-----------------RGYIGLEYYGRTVGI 301
IGFH Y +F+ ++ L+ S+ R L+ R V +
Sbjct: 191 YIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKL 250
Query: 302 KIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHL 361
PVG +I S L A ++ ++ + G ++L + +D KG+ KL A E L
Sbjct: 251 GAHPVGTDPERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERL 310
Query: 362 LKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPV 421
L++ P+ G+ LV PA +E+Q +I RIN F R G+ P+ F + +
Sbjct: 311 LERRPELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSL 370
Query: 422 TLSERAAYYTIAECVVVTAVRDGMNLTPYEYIV---CRQGVSGSESSSESSAPKKSMLVV 478
E +A++ +A+ + +T +RDG+NL EY+ GV LV+
Sbjct: 371 PYEEVSAWFAMADVMWITPLRDGLNLVAKEYVAAQGLLDGV----------------LVL 414
Query: 479 SEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWAR 538
SEF G + L GA+ NP++ E ++ A+ M +AE+Q R + + V+ +DV WA
Sbjct: 415 SEFAGAAVELKGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQRWAD 474
Query: 539 SFF 541
F
Sbjct: 475 EFL 477
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. Length = 487 |
| >gnl|CDD|182249 PRK10117, PRK10117, trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Score = 209 bits (533), Expect = 9e-60
Identities = 116/403 (28%), Positives = 214/403 (53%), Gaps = 26/403 (6%)
Query: 147 FYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWI 206
+Y+ F LWP FHY L +F R WE Y+ N + + +++ ++ DD +WI
Sbjct: 76 YYNQFSNAVLWPAFHYRLDLV-----QFQRPAWEGYLRVNALLADKLLPLLKD-DDIIWI 129
Query: 207 HDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFD 266
HDYHL+ + LR+R R+GFFLH PFP+ EI+ LP +E+L+ L + DL+GF T +
Sbjct: 130 HDYHLLPFASELRKRGVNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTEN 189
Query: 267 YARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDW-- 324
FL C S + + +S + + +G+ ++ P+GI + + + + A
Sbjct: 190 DRLAFLDCLSNLTRVTTRSGKSHTA---WGKAFRTEVYPIGI---EPDEIAKQAAGPLPP 243
Query: 325 RVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGR 384
++ +LK + + + V+ +D KG+ + LA E LL+++P+ G+ QIA +RG
Sbjct: 244 KLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGD 303
Query: 385 GKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDG 444
+ ++I+ ++ RIN +G+ G+ P+ ++++ + ++ +VT +RDG
Sbjct: 304 VQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDG 363
Query: 445 MNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLSGAIRVNPWNIEATAE 504
MNL EY+ ++ + + P +LV+S+F G + L+ A+ VNP++ + A
Sbjct: 364 MNLVAKEYV----------AAQDPANP--GVLVLSQFAGAANELTSALIVNPYDRDEVAA 411
Query: 505 AMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERT 547
A+ A+ M AE+ RH + + +D+ +W F D+++
Sbjct: 412 ALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQI 454
|
Length = 474 |
| >gnl|CDD|216992 pfam02358, Trehalose_PPase, Trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 187 bits (476), Expect = 2e-54
Identities = 72/163 (44%), Positives = 96/163 (58%), Gaps = 4/163 (2%)
Query: 595 LFDYDGTVMPQ--TSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKL 652
DYDGT+ P PS ++S++N L +D NTV ++SGR R F L
Sbjct: 1 FLDYDGTLSPIVEDPDAAVPSDRLLSLLNRLASDPPNTVAIISGRSRAFE-DLFFGVPNL 59
Query: 653 GIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHH 712
G+AAEHG F+R E+W N + D W + +++ YTE T GSYIE K+SAL WH+
Sbjct: 60 GLAAEHGAFIRDPGGEDWTNLAEVEDLDWKKEVAAILEEYTERTPGSYIEDKKSALAWHY 119
Query: 713 RDADPGFGSSQAKELLDHLESVLANEPA-AVKSGQFIVEVKPQ 754
R+AD FG QAKEL +HLESVL + P V G+ +VEV+P
Sbjct: 120 RNADDDFGVFQAKELAEHLESVLKDYPDVRVTQGKKVVEVRPV 162
|
This family consist of trehalose-phosphatases EC:3.1.3.12 these enzyme catalyze the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. The aligned region is present in trehalose-phosphatases and comprises the entire length of the protein it is also found in the C-terminus of trehalose-6-phosphate synthase EC:2.4.1.15 adjacent to the trehalose-6-phosphate synthase domain - pfam00982. It would appear that the two equivalent genes in the E. coli otsBA operon otsA the trehalose-6-phosphate synthase and otsB trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. Length = 235 |
| >gnl|CDD|224789 COG1877, OtsB, Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 117 bits (295), Expect = 2e-29
Identities = 52/174 (29%), Positives = 87/174 (50%), Gaps = 6/174 (3%)
Query: 582 IVSAYLRSKSRAILFDYDGTVMP--QTSINKAPSQAVISIINTLCNDARNTVFVVSGRGR 639
++ YL ++ R + DYDGT+ P ++S++ L +D RN V ++SGR
Sbjct: 9 LLEPYLNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSL 68
Query: 640 DCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGS 699
L + F +G+ AEHG +R + W N + D W++ +++ Y E T GS
Sbjct: 69 AELERLFGV-PGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVERTPGS 127
Query: 700 YIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKP 753
YIE K A+ H+R+A+ G++ A L + L V G+ +VE++P
Sbjct: 128 YIERKGFAVALHYRNAEDDEGAALALAEAATLINELK---LRVTPGKMVVELRP 178
|
Length = 266 |
| >gnl|CDD|233092 TIGR00685, T6PP, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 74.1 bits (182), Expect = 1e-14
Identities = 57/176 (32%), Positives = 84/176 (47%), Gaps = 18/176 (10%)
Query: 589 SKSRAILFDYDGTVMPQTSINKAPSQAVIS-----IINTLCNDARNTVFVVSGRGRDCLG 643
++ RA FDYDGT+ I P AV+S I+ L N ++++S GR L
Sbjct: 1 ARKRAFFFDYDGTLSE---IVPDPDAAVVSDRLLTILQKLAARPHNAIWIIS--GRKFLE 55
Query: 644 KW-FSPCKKLGIAAEHGYFMRWSAD-EEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYI 701
KW LG+A EHG M+ + ++W N + + W A + + T G +I
Sbjct: 56 KWLGVKLPGLGLAGEHGCEMKDNGSCQDWVNLTEKIPS-WKVRANELREEITTR-PGVFI 113
Query: 702 EIKESALVWHHRDA-DPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQVY 756
E K AL WH+R A P +AKEL E +L+ V G+ +VE+KP+
Sbjct: 114 ERKGVALAWHYRQAPVPELARFRAKEL---KEKILSFTDLEVMDGKAVVELKPRFV 166
|
Trehalose, a neutral disaccharide of two glucose residues, is an important osmolyte for dessication and/or salt tolerance in a number of prokaryotic and eukaryotic species, including E. coli, Saccharomyces cerevisiae, and Arabidopsis thaliana. Many bacteria also utilize trehalose in the synthesis of trehalolipids, specialized cell wall constituents believed to be involved in the uptake of hydrophobic substances. Trehalose dimycolate (TDM, cord factor) and related substances are important constituents of the mycobacterial waxy coat and responsible for various clinically important immunological interactions with host organism. This enzyme, trehalose-phosphatase, removes a phosphate group in the final step of trehalose biosynthesis. The trehalose-phosphatase from Saccharomyces cerevisiae is fused to the synthase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes [Cellular processes, Adaptations to atypical conditions]. Length = 244 |
| >gnl|CDD|233434 TIGR01484, HAD-SF-IIB, HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 1e-05
Identities = 37/167 (22%), Positives = 67/167 (40%), Gaps = 12/167 (7%)
Query: 593 AILFDYDGT-VMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKK 651
+ FD DGT + P S I + L A V +V+GR + +
Sbjct: 1 LLFFDLDGTLLDPNAHE---LSPETIEALERLRE-AGVKVVLVTGRSLAEIKELLKQL-P 55
Query: 652 LGIAAEHGYFMRWSADEEWQNCGQSVDF--GWIQIAEPVMKLYTESTDGSYIEIKESALV 709
L + AE+G + + + + + G + +K +E G++IE K A+
Sbjct: 56 LPLIAENGALIFYPGEILYIEPSDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVA 115
Query: 710 WHHRDADPGFGSSQAKELLDHLESVLANEPA--AVKSGQFIVEVKPQ 754
H+ A+ G ++ + LE + N+ A+ G+ +EV P
Sbjct: 116 IHYVGAELGQEL--DSKMRERLEKIGRNDLELEAIYVGKTDLEVLPA 160
|
This subfamily falls within the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The Class II subfamilies are characterized by a domain that is located between the second and third conserved catalytic motifs of the superfamily domain. The IIB subfamily is distinguished from the IIA subfamily (TIGR01460) by homology and the predicted secondary structure of this domain by PSI-PRED. The IIB subfamily's Class II domain has the following predicted structure: Helix-Sheet-Sheet-(Helix or Sheet)-Helix-Sheet-(variable)-Helix-Sheet-Sheet. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing OMNI|TC0379 and OMNI|SA2196 whose relationship to the other groups is unclear [Unknown function, Enzymes of unknown specificity]. Length = 204 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 3e-04
Identities = 45/255 (17%), Positives = 82/255 (32%), Gaps = 44/255 (17%)
Query: 202 DYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIG 261
D V HD+ ++ R + + +H + + +
Sbjct: 87 DVVHAHDWLALLAAALAARLL-GIPLVLTVHGLEFGRPGNELGLLLKLAR-------ALE 138
Query: 262 FHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLAD 321
A + S E + I ++P G+ + R A
Sbjct: 139 RRALRRADRII-AVSEATREELRE-------LGGVPPEKITVIPNGVDTERFRPAPRAAR 190
Query: 322 KDWRVQELKQQFEGKTVL-LGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANP 380
+ + E + +L +G + KGVDL L A+ L K++P R V+V
Sbjct: 191 RRLGIPE-----DEPVILFVGR--LVPRKGVDLLLEALAKLRKEYPDV--RLVIV----- 236
Query: 381 ARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTA 440
G G EE++A + + V F+ V + A Y A+ V+ +
Sbjct: 237 --GDGPLREELEALAAE--LGLGD--------RVTFLGF-VPDEDLPALYAAADVFVLPS 283
Query: 441 VRDGMNLTPYEYIVC 455
+ +G L E +
Sbjct: 284 LYEGFGLVLLEAMAA 298
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 0.001
Identities = 28/122 (22%), Positives = 47/122 (38%), Gaps = 22/122 (18%)
Query: 335 GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAE 394
K ++L V + KG+DL L A L +QHP + V+V G G++ ++++
Sbjct: 1 DKPIILFVGRLVPEKGLDLLLEAFALLKEQHPNL--KLVIV-------GDGEEEKKLKKL 51
Query: 395 IHATCKRINETF-GRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYI 453
N F G E + Y IA+ V+ + +G L E +
Sbjct: 52 ALKLGLEDNVIFVGFVPDEDL------------IELYRIADLFVLPSRYEGFGLVLLEAM 99
Query: 454 VC 455
Sbjct: 100 AA 101
|
Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 761 | |||
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 100.0 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 100.0 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 100.0 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 100.0 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 100.0 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 100.0 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 100.0 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 100.0 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 100.0 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 99.97 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 99.96 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 99.94 | |
| PLN02151 | 354 | trehalose-phosphatase | 99.93 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 99.93 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 99.93 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 99.93 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 99.93 | |
| PLN02580 | 384 | trehalose-phosphatase | 99.93 | |
| PLN02316 | 1036 | synthase/transferase | 99.93 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 99.92 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 99.92 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 99.92 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 99.92 | |
| PLN03017 | 366 | trehalose-phosphatase | 99.92 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 99.91 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 99.91 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 99.91 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 99.9 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 99.9 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 99.9 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 99.9 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 99.89 | |
| PLN00142 | 815 | sucrose synthase | 99.89 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 99.89 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 99.89 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.89 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 99.88 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 99.87 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 99.87 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 99.86 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 99.86 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 99.86 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.86 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 99.86 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 99.86 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 99.85 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 99.85 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.85 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 99.85 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 99.85 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.84 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 99.84 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 99.84 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 99.84 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.84 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.83 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 99.83 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 99.83 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 99.83 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 99.83 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 99.83 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.83 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.82 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.82 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 99.81 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.81 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 99.81 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.8 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 99.8 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 99.8 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.79 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.78 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 99.77 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.77 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 99.76 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 99.75 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.75 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.75 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.74 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.72 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.72 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.69 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 99.67 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.64 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 99.56 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.55 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.45 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 99.4 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.39 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 99.37 | |
| PLN02423 | 245 | phosphomannomutase | 99.34 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.32 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.3 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.28 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.28 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.28 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.27 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.25 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.23 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.23 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.21 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.21 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.18 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 99.17 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.17 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.16 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.15 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.15 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.13 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 99.11 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 99.09 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.06 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.06 | |
| PLN02887 | 580 | hydrolase family protein | 99.05 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 99.05 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 99.04 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 99.02 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 98.93 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 98.93 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 98.92 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 98.89 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.88 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.87 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 98.85 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 98.79 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 98.75 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.75 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 98.7 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 98.68 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 98.47 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 98.39 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 98.17 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 98.09 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 98.09 | |
| KOG3189 | 252 | consensus Phosphomannomutase [Lipid transport and | 98.04 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 97.91 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 97.78 | |
| PF03332 | 220 | PMM: Eukaryotic phosphomannomutase; InterPro: IPR0 | 97.68 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 97.36 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.34 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 96.77 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 96.57 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 96.55 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 96.41 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 96.39 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 96.36 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 96.28 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 96.23 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 96.14 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 96.11 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 96.09 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.04 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 96.03 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 95.98 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 95.96 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 95.37 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 95.27 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 95.13 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 94.31 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 94.2 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 94.03 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 94.0 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 93.95 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 93.93 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 93.88 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 93.78 | |
| PRK06769 | 173 | hypothetical protein; Validated | 93.73 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 93.67 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 93.64 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 93.47 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 93.34 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 93.24 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 92.52 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 92.4 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 92.09 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 91.95 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 91.83 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 91.8 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 91.66 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 91.62 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 91.57 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 91.54 | |
| PLN02954 | 224 | phosphoserine phosphatase | 91.53 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 91.44 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 91.42 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 90.9 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 90.88 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 90.88 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 90.63 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 90.13 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 89.83 | |
| KOG3742 | 692 | consensus Glycogen synthase [Carbohydrate transpor | 89.43 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 89.38 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 89.19 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 89.08 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 89.03 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 88.59 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 87.56 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 86.99 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 86.82 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 86.79 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 86.55 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 86.42 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 86.12 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 86.02 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 85.3 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 85.24 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 84.59 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 83.16 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 82.94 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 82.87 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 82.59 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 82.58 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 82.49 | |
| COG3882 | 574 | FkbH Predicted enzyme involved in methoxymalonyl-A | 82.26 | |
| PF06941 | 191 | NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol | 81.9 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 81.65 | |
| COG0816 | 141 | Predicted endonuclease involved in recombination ( | 81.28 |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-181 Score=1604.29 Aligned_cols=758 Identities=71% Similarity=1.221 Sum_probs=721.1
Q ss_pred CCcccccchhhcccCCCCCCCCcccccCCccccccccccccccccccCCCCCCCC-CCCCCCeEEEEEcCCccceeecCC
Q 004314 1 MMSKSYTNLLDLASGNFPAMGPSREKKRLPRVMTVPGVISELDDDQANSVSSDVP-SSVAQDRVIIVANQLPVKAKRRPD 79 (761)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~r~iivsnrlP~~~~~~~~ 79 (761)
|+||||+|||||++|++..++ ++.+++|++|++||+++++|+++..+.+++.+ +..+.+|+||||||||+.++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rliiVsnrlPv~~~~~~~ 78 (854)
T PLN02205 1 MVSRSYSNLLELASGESPSFG--RMNRRIPRIMTVAGIMSDIDDDPSESVCSDPSSSSVPKDRIIIVANQLPIRAQRKSD 78 (854)
T ss_pred CcChhhccHHHhccCCccccc--ccccCCCceecCCCcccccccccccccccccccCCCCCCcEEEEEccCceEEEEcCC
Confidence 899999999999999999999 88999999999999999999988877777666 556678999999999999998755
Q ss_pred C-CCeEEeecCCchhHhhhccCCC-CCceEEEEccCCCCCcchhhhhHHhhccCeeEEEeecChhhhhhhhhcccccccc
Q 004314 80 N-KGWSFSWDEDSLLLQLKDGLPE-DMEVIYVGSLKVDVDLSEQDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLW 157 (761)
Q Consensus 80 ~-~~~~~~~~~~~l~~~l~~~~~~-~~~~~wvG~~~~~~~~~~~~~v~~~l~~~~~~~pv~l~~~~~~~~y~gf~~~~LW 157 (761)
+ ++|+|++++|||+++|++++.. ..+++||||++.++++++|+++.+.++++|+|+||||+++++++||+||||++||
T Consensus 79 g~~~~~~~~~~ggL~~~l~~~~~~~~~~~~wvG~~~~~~~~~~~~~~~~~l~~~~~~~pv~l~~~~~~~~Y~gf~n~~LW 158 (854)
T PLN02205 79 GSKGWIFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIHLNEQEEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLW 158 (854)
T ss_pred CCcceEEEeCCCchHHHHhhhhhcccCceEEEEecCCCCCchhhhhHHHHHhcCceEEEeeCCHHHHHHHHHhhhhcccc
Confidence 4 7899999999999999988864 4789999999998888888888888888999999999999999999999999999
Q ss_pred ccccccccCCCCCCCccChHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCc
Q 004314 158 PLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPS 237 (761)
Q Consensus 158 pl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~ 237 (761)
|+|||+++..|+++.+|+++.|++|++||++||++|+++++|++|+|||||||||+||+|||+++|+++||||||||||+
T Consensus 159 PlfH~~~~~~~~~~~~f~~~~w~~Y~~vN~~FA~~v~~~~~~~~d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs 238 (854)
T PLN02205 159 PLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPS 238 (854)
T ss_pred chhccCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCC
Confidence 99999988888877799999999999999999999999999867999999999999999999999999999999999999
Q ss_pred hhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhh
Q 004314 238 SEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVL 317 (761)
Q Consensus 238 ~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~ 317 (761)
+|+||+||+|++||+|||+||+|||||++|++||++||+|++|+++..++|.++++|+||+++|+++|+|||++.|...+
T Consensus 239 ~eifr~LP~r~eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~ 318 (854)
T PLN02205 239 SEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVL 318 (854)
T ss_pred hHHHhhCCcHHHHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998888888999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHcC--CCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHH
Q 004314 318 RLADKDWRVQELKQQFE--GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEI 395 (761)
Q Consensus 318 ~~~~~~~~~~~lr~~~~--~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev 395 (761)
..+++.+++++++++++ |+++|+||||||++|||.+||+|||+||++||+|+||++||||++|+|+++++|+++++++
T Consensus 319 ~~~~~~~~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev 398 (854)
T PLN02205 319 SLPETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAET 398 (854)
T ss_pred cChhHHHHHHHHHHHhccCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHH
Confidence 99999999999999995 7999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCC--CCC
Q 004314 396 HATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSA--PKK 473 (761)
Q Consensus 396 ~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~--~~~ 473 (761)
+++|++||++||+.+|+||+|+.+.++++|+.|||++||||+|||+|||||||++||+|||++++.++++++.++ +++
T Consensus 399 ~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~ 478 (854)
T PLN02205 399 HSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKK 478 (854)
T ss_pred HHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCccccccccccccccCCC
Confidence 999999999999999999999999999999999999999999999999999999999999998877777666555 478
Q ss_pred ceEEEcCCCCCcccccCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHHHHHHHHHhhcc
Q 004314 474 SMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERTCKDHFK 553 (761)
Q Consensus 474 g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l~~~~~~~~~ 553 (761)
|+||+|||+||+++|+||++|||||++++|+||.+||+||++||+.||++++++|++||+.+|+++||++|+++|+++++
T Consensus 479 gvLiLSEfaGaa~~L~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W~~~fl~~l~~~~~~~~~ 558 (854)
T PLN02205 479 SMLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCRDHSR 558 (854)
T ss_pred CceEeeeccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred ccccccCcccceeeeecCcccccCCHHHHHHHHHhccceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEE
Q 004314 554 RRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFV 633 (761)
Q Consensus 554 ~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~I 633 (761)
++||++|||++||+++++++|++|++++++++|+++++|+|+|||||||+|+.+....|+++++++|++||++++|.|+|
T Consensus 559 ~~~~~~g~g~~~~~~~~~~~~~~l~~~~i~~~y~~~~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaI 638 (854)
T PLN02205 559 RRCWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFI 638 (854)
T ss_pred hhhcccccccccccccccccccccCHHHHHHHHHhhcCeEEEEecCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999987667789999999999999999999999
Q ss_pred EcCCChhhHHhhccCCCCceEEccCCeEEeecCCcceeecCcCcCcchHHHHHHHHHHHhcCCCccEEEecCceEEEEcc
Q 004314 634 VSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHR 713 (761)
Q Consensus 634 vSGR~~~~L~~~f~~~~~l~liaehGa~ir~~~~~~w~~~~~~~~~~w~~~v~~im~~y~~~t~Gs~iE~k~~~l~~hyr 713 (761)
+|||+++.|++||+++++++++||||++++++++..|+......+..|++.+.++|+.|+++|||++||.|+++++||||
T Consensus 639 vSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR 718 (854)
T PLN02205 639 VSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCVPVADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYE 718 (854)
T ss_pred EeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecchhhhHHHHHHHHHHHHHHhcCCCchhheecceEEEEehh
Confidence 99999999999999988899999999999998777898654444678999999999999999999999999999999999
Q ss_pred cCCCCCchHHHHHHHHHHHHHhcCCCcEEEeCCeEEEEEeCCCCcCC
Q 004314 714 DADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQVYIQLR 760 (761)
Q Consensus 714 ~ad~d~~~~qa~el~~~L~~~l~~~~v~V~~G~~~vEV~p~gvnKG~ 760 (761)
++||+++.+||+++.++++..+.+.++.|.+|+++|||+|+|+|||.
T Consensus 719 ~adpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV~p~gvnKG~ 765 (854)
T PLN02205 719 DADPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSKGL 765 (854)
T ss_pred hCChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEEEeCCCCHHH
Confidence 99999999999999999999998888899999999999999999995
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-154 Score=1359.06 Aligned_cols=661 Identities=36% Similarity=0.687 Sum_probs=606.3
Q ss_pred CCeEEEEEcCCccceeecCCCCCeEEeecCCchhHhhhccCCCCCceEEEEccCCCCCcc-hhhhhHHhhccCeeEEEee
Q 004314 60 QDRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLS-EQDDVSQLLLDRFKCVPAF 138 (761)
Q Consensus 60 ~~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvG~~~~~~~~~-~~~~v~~~l~~~~~~~pv~ 138 (761)
++|+||||||||+.++++++ |.|.++++.|||+++|.+ + ...+++||||+|..++.+ +++.+.+ .+.+|+|+|||
T Consensus 93 ~~rlIiVSNRlPv~~~~~~~-g~~~~~~s~GGLvsaL~~-~-~~~~~~WVGw~g~~~~~~~~~~~~~~-~l~~~~~~pV~ 168 (934)
T PLN03064 93 RQRLLVVANRLPVSAVRRGE-DSWSLEISAGGLVSALLG-V-KEFEARWIGWAGVNVPDEVGQKALTK-ALAEKRCIPVF 168 (934)
T ss_pred CCCEEEEECCCCcceeecCC-CceEEeECCCCcHHHhcc-c-ccCCeEEEeeCCCCCCCcchhHHHHH-HhccCceEEEe
Confidence 68999999999999988654 789999999999999975 5 578999999999877653 4555544 45789999999
Q ss_pred cChhhhhhhhhccccccccccccccc-cCC--CCCCCccChHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHH
Q 004314 139 LPPDILTKFYHGFCKQHLWPLFHYML-PFS--ATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLP 215 (761)
Q Consensus 139 l~~~~~~~~y~gf~~~~LWpl~H~~~-~~~--~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp 215 (761)
|+++++++||+||||++|||+|||+. +.. ++ ..+|++++|++|++||++||++|+++++| +|+|||||||||+||
T Consensus 169 l~~~~~~~~Y~gfcn~~LWPlfHy~~~~~~~~~~-~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-gD~VWVHDYHL~LlP 246 (934)
T PLN03064 169 LDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLA-TTRSFQSQFAAYKKANQMFADVVNEHYEE-GDVVWCHDYHLMFLP 246 (934)
T ss_pred CCHHHHHHHHHHhhhcccchhhcCcCCCcccccc-cccccHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhhHHH
Confidence 99999999999999999999999973 211 11 14688899999999999999999999987 599999999999999
Q ss_pred HHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEc
Q 004314 216 TFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYY 295 (761)
Q Consensus 216 ~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~ 295 (761)
+|||+++|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||++||.|++|++... .++.++
T Consensus 247 ~~LR~~~p~~~IGfFlHiPFPs~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~----~~v~~~ 322 (934)
T PLN03064 247 KCLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTP----EGVEDQ 322 (934)
T ss_pred HHHHHhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccC----CeEEEC
Confidence 9999999999999999999999999999999999999999999999999999999999999999987543 358899
Q ss_pred CeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEE
Q 004314 296 GRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLV 375 (761)
Q Consensus 296 gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLv 375 (761)
||.++|.++|+|||++.|...+..+++.+++++++++++|+++|+||||||++|||.+||+||++||++||+|++|||||
T Consensus 323 Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLv 402 (934)
T PLN03064 323 GRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLL 402 (934)
T ss_pred CEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhCCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEE
Confidence 99999999999999999999988899999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheee
Q 004314 376 QIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVC 455 (761)
Q Consensus 376 qi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~ 455 (761)
||+.|+|+++++|+++++++.++|++||++||+.+|.||+|+.+.++++++.|||++|||||+||+|||||||++|||||
T Consensus 403 QIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~ 482 (934)
T PLN03064 403 QIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVAC 482 (934)
T ss_pred EEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCCCCCCCCceEEEcCCCCCcccc-cCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHH
Q 004314 456 RQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL-SGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVA 534 (761)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~ 534 (761)
|.+ ++|+||+|||+|++++| .+|++|||||++++|+||.+||+|+++||+.|+++++++|.+||+.
T Consensus 483 ~~~-------------~~GvLILSEfaGaa~~L~~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~d~~ 549 (934)
T PLN03064 483 QDS-------------KKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHTAQ 549 (934)
T ss_pred hcC-------------CCCCeEEeCCCchHHHhCCceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCHH
Confidence 873 57899999999999999 4899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccccccccCcccceeeeecCcccccCCHHHHHHHHHhccceeEEecCCCcCCCCCCC------
Q 004314 535 YWARSFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDYDGTVMPQTSI------ 608 (761)
Q Consensus 535 ~Wa~~~l~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~lDyDGTL~~~~~~------ 608 (761)
+|+++|+.+|.++...+.. ++. . -+.+|+.+.++++|+++++|+|+|||||||+|+.+.
T Consensus 550 ~Wa~~fl~~L~~~~~~~~~-~~~-----------~---~~~~l~~~~~~~~y~~a~~RLlfLDyDGTLap~~~~P~~~~~ 614 (934)
T PLN03064 550 EWAETFVSELNDTVVEAQL-RTR-----------Q---VPPQLPPEDAIQRYLQSNNRLLILGFNATLTEPVDTPGRRGD 614 (934)
T ss_pred HHHHHHHHHHHHHHhhhhc-ccc-----------c---cCCCCCHHHHHHHHHhccceEEEEecCceeccCCCCcccccc
Confidence 9999999999988654321 111 1 124799999999999999999999999999997632
Q ss_pred -----CCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCCCceEEccCCeEEeecCCcceee-cCcCcCcchH
Q 004314 609 -----NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQN-CGQSVDFGWI 682 (761)
Q Consensus 609 -----~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~~l~liaehGa~ir~~~~~~w~~-~~~~~~~~w~ 682 (761)
...|+++++++|++||+||+|+|+|+|||+++.|++||+.+ +++++||||++++.++ ..|++ +....+.+|+
T Consensus 615 ~~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~-~L~LaAEHG~~~R~~~-~~w~~~~~~~~~~~W~ 692 (934)
T PLN03064 615 QIKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEF-DMWLAAENGMFLRHTK-GEWMTTMPEHLNMDWV 692 (934)
T ss_pred cccccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCC-CceEEeeCCeEEecCC-CcceeccccccchHHH
Confidence 45688999999999999999999999999999999999987 7999999999999874 58984 3333467899
Q ss_pred HHHHHHHHHHhcCCCccEEEecCceEEEEcccCCCCCchHHHHHHHHHH-HHHhcCCCcEEEeCCeEEEEEeCCCCcCC
Q 004314 683 QIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHL-ESVLANEPAAVKSGQFIVEVKPQVYIQLR 760 (761)
Q Consensus 683 ~~v~~im~~y~~~t~Gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L-~~~l~~~~v~V~~G~~~vEV~p~gvnKG~ 760 (761)
+.+.++|++|+++|||++||+|+++++||||++||++|..||+++.++| +..+.+.++.|+.|+++|||+|.|+|||.
T Consensus 693 ~~v~~ile~~~eRtPGS~IE~K~~SLawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~~Gk~VVEVrP~gvnKG~ 771 (934)
T PLN03064 693 DSVKHVFEYFTERTPRSHFETRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPVGVTKGA 771 (934)
T ss_pred HHHHHHHHHHHhcCCCcEEEEcCcEEEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEEEeCCeEEEEEcCCCCHHH
Confidence 9999999999999999999999999999999999999999999999999 45566778999999999999999999996
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-145 Score=1295.36 Aligned_cols=663 Identities=36% Similarity=0.690 Sum_probs=600.9
Q ss_pred CCCCeEEEEEcCCccceeecCCCCCeEEeecCCchhHhhhccCCCCCceEEEEccCCCCCcc-hhhhhHHhhccCeeEEE
Q 004314 58 VAQDRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLS-EQDDVSQLLLDRFKCVP 136 (761)
Q Consensus 58 ~~~~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvG~~~~~~~~~-~~~~v~~~l~~~~~~~p 136 (761)
...+|+||||||||+.+.+++ +|+|+++++.|||+.+|.+ +. ..+++||||+|.+++++ ++..+. ..+.+|+|+|
T Consensus 8 ~~~~rliiVsnrlp~~~~~~~-~~~~~~~~~~ggl~~al~~-~~-~~~~~Wvgw~g~~~~~~~~~~~~~-~~~~~~~~~p 83 (797)
T PLN03063 8 GERPRLLVVANRLPVSAKRTG-EDSWSLEMSPGGLVSALLG-VK-EFETKWIGWPGVDVHDEIGKAALT-ESLAEKGCIP 83 (797)
T ss_pred cCCCCEEEEECCCCccceecC-CCceEEeeCCCCHHHHHHH-HH-hcCceEEEeCCCcCCcccchhHHH-HHhhcCCeEE
Confidence 357899999999999988764 3799999999999999986 44 57999999999876554 333333 4467899999
Q ss_pred eecChhhhhhhhhccccccccccccccc-cCCCC-CCCccChHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchH
Q 004314 137 AFLPPDILTKFYHGFCKQHLWPLFHYML-PFSAT-HGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVL 214 (761)
Q Consensus 137 v~l~~~~~~~~y~gf~~~~LWpl~H~~~-~~~~~-~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~ll 214 (761)
||| ++++++||+||||++|||+|||+. +..+. ...+|+++.|++|++||++||++|++.++| +|+|||||||||+|
T Consensus 84 v~l-~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~d~vWvhDYhL~ll 161 (797)
T PLN03063 84 VFL-NEVFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFESQYDAYKKANRMFLDVVKENYEE-GDVVWCHDYHLMFL 161 (797)
T ss_pred eeh-HHHHHHHHHHHHhhhcchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhhhH
Confidence 999 999999999999999999999982 32222 114566789999999999999999999987 59999999999999
Q ss_pred HHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEE
Q 004314 215 PTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEY 294 (761)
Q Consensus 215 p~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~ 294 (761)
|+|||+++|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||++||+|++|++.... ++.+
T Consensus 162 p~~lR~~~~~~~igfFlHiPFPs~e~fr~lp~r~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~----~i~~ 237 (797)
T PLN03063 162 PQYLKEYNNKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHE----GVVD 237 (797)
T ss_pred HHHHHHhCCCCcEEEEecCCCCCHHHHhhCCCHHHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCC----ceEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999875432 4779
Q ss_pred cCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeE
Q 004314 295 YGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVL 374 (761)
Q Consensus 295 ~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvL 374 (761)
+|+.++|.++|+|||++.|.+....+++.+...+++++++++++|++|||||+.|||.++|+||++|+++||+++++++|
T Consensus 238 ~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvL 317 (797)
T PLN03063 238 QGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVML 317 (797)
T ss_pred CCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhcCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEE
Confidence 99999999999999999998877667777777788888999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhhee
Q 004314 375 VQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIV 454 (761)
Q Consensus 375 vqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama 454 (761)
|||++|+|+++++|+++++++++++++||++||+.+|.||+|+.+.++.+++.++|++|||||+||++||||||++||||
T Consensus 318 vqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA 397 (797)
T PLN03063 318 VQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVA 397 (797)
T ss_pred EEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHhe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc-CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCH
Q 004314 455 CRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDV 533 (761)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~ 533 (761)
||.+ ++|++|+|||+|+++.++ +|++|||||++++|+||.++|+|+++||+.|+++++++|++||+
T Consensus 398 ~g~p-------------~~gvlVlSe~~G~~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~~~~ 464 (797)
T PLN03063 398 CQKA-------------KKGVLVLSEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSA 464 (797)
T ss_pred eecC-------------CCCCEEeeCCcCchhhhcCCeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhhCCH
Confidence 9973 478999999999999994 89999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccccccccCcccceeeeecCcccccCCHHHHHHHHHhccceeEEecCCCcCCCCCC-----C
Q 004314 534 AYWARSFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDYDGTVMPQTS-----I 608 (761)
Q Consensus 534 ~~Wa~~~l~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~lDyDGTL~~~~~-----~ 608 (761)
.+|+++|+++|+++++.+..+. ...+.+|+.+.++++|+++++|+|+|||||||+++.+ .
T Consensus 465 ~~Wa~~fl~~l~~~~~~~~~~~---------------~~~~~~l~~~~~~~~y~~a~~rll~LDyDGTL~~~~~~~~~p~ 529 (797)
T PLN03063 465 QKWADDFMSELNDIIVEAELRT---------------RNIPLELPEQDVIQQYSKSNNRLLILGFYGTLTEPRNSQIKEM 529 (797)
T ss_pred HHHHHHHHHHHHHHhhhhhhcc---------------cCCCCCCCHHHHHHHHHhccCeEEEEecCccccCCCCCccccc
Confidence 9999999999999887653210 1234579999999999999999999999999998754 4
Q ss_pred CCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCCCceEEccCCeEEeecCCcceeecC-cCcCcchHHHHHH
Q 004314 609 NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCG-QSVDFGWIQIAEP 687 (761)
Q Consensus 609 ~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~~l~liaehGa~ir~~~~~~w~~~~-~~~~~~w~~~v~~ 687 (761)
.+.|+++++++|++|++|++|.|+|+|||+++.|++||+++ +++++||||++++.+ +.+|++.. ...+.+|++.+.+
T Consensus 530 ~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~-~l~l~aeHG~~~r~~-~~~w~~~~~~~~~~~w~~~v~~ 607 (797)
T PLN03063 530 DLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEY-NIWLAAENGMFLRHT-SGEWVTTMPEHMNLDWVDGVKN 607 (797)
T ss_pred cCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCC-CCcEEEeCCEEEecC-CCceeeccccccChhHHHHHHH
Confidence 46799999999999999999999999999999999999975 699999999999976 45898543 2346789999999
Q ss_pred HHHHHhcCCCccEEEecCceEEEEcccCCCCCchHHHHHHHHHHH-HHhcCCCcEEEeCCeEEEEEeCCCCcCC
Q 004314 688 VMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLE-SVLANEPAAVKSGQFIVEVKPQVYIQLR 760 (761)
Q Consensus 688 im~~y~~~t~Gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~-~~l~~~~v~V~~G~~~vEV~p~gvnKG~ 760 (761)
+|+.|+++|||++||+|+++++||||++||+++..||+++.++|. ..+.+.+++|+.|+++|||+|+|+|||.
T Consensus 608 ~l~~~~~rtpGs~iE~K~~sla~HyR~adp~~g~~~a~el~~~l~~~~~~~~~~~v~~Gk~vvEvrp~gvnKG~ 681 (797)
T PLN03063 608 VFKYFTDRTPRSYVEKSETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHAIGVTKGA 681 (797)
T ss_pred HHHHHHHhCCCcEEEEcCeEEEEEcCCCChHHHHHHHHHHHHHHHHhhccCCCcEEEECCeEEEEEcCCCChHH
Confidence 999999999999999999999999999999999999999999994 4556678999999999999999999995
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-134 Score=1198.79 Aligned_cols=655 Identities=35% Similarity=0.660 Sum_probs=599.9
Q ss_pred CeEEEEEcCCccceeecCCCCCeEEeecCCchhHhhhccCCCCCceEEEEccCCCCCc---chhhhhHHhhccCeeEEEe
Q 004314 61 DRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDL---SEQDDVSQLLLDRFKCVPA 137 (761)
Q Consensus 61 ~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvG~~~~~~~~---~~~~~v~~~l~~~~~~~pv 137 (761)
+|+||||||||+.+++++ |+|+++++.|||+.+|.+.+. ..+++||||+|.+.+. +++.++. ..+.+|+|+||
T Consensus 1 ~~livvsnr~p~~~~~~~--~~~~~~~~~ggl~~~l~~~~~-~~~~~wvg~~g~~~~~~~~~~~~~~~-~~~~~~~~~~v 76 (726)
T PRK14501 1 SRLIIVSNRLPVTVVRED--GGVELTPSVGGLATGLRSFHE-RGGGLWVGWPGLDLEEESEEQRARIE-PRLEELGLVPV 76 (726)
T ss_pred CCEEEEEcCCCcceeecC--CceEEeeCCCchHHHHHHHhh-cCCeEEEEeCCCCccccchhhhhhhh-hhccCceEEEE
Confidence 489999999999998764 589999999999999987655 5899999999976553 2223333 45678999999
Q ss_pred ecChhhhhhhhhccccccccccccccccCCCCCCCccChHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHH
Q 004314 138 FLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTF 217 (761)
Q Consensus 138 ~l~~~~~~~~y~gf~~~~LWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~ 217 (761)
||++++++.||+||||++|||+|||+++. ..|++++|++|++||++||++|++.++| +|+|||||||||+||++
T Consensus 77 ~l~~~~~~~~y~gf~n~~lWp~~H~~~~~-----~~~~~~~w~~Y~~vN~~fA~~~~~~~~~-~d~vwvhDYhl~l~p~~ 150 (726)
T PRK14501 77 FLSAEEVDRYYEGFCNSTLWPLFHYFPEY-----TEFEDRFWESYERVNQRFAEAIAAIARP-GDVVWVHDYQLMLLPAM 150 (726)
T ss_pred eCCHHHHHHHHHHhhhccccchhcccCcc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeCchhhhHHHH
Confidence 99999999999999999999999999876 4799999999999999999999999997 59999999999999999
Q ss_pred HHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCe
Q 004314 218 LRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGR 297 (761)
Q Consensus 218 lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr 297 (761)
||++.|+++||||||+|||++|+|+++|+|++||+|||+||+|||||++|++||++||.++++++... ..+.+.|+
T Consensus 151 lr~~~~~~~igfFlH~pfP~~~~f~~lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~----~~~~~~gr 226 (726)
T PRK14501 151 LRERLPDARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETEL----GEIRLGGR 226 (726)
T ss_pred HHhhCCCCcEEEEeeCCCCChHHHhhCCChHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCC----CeEEECCE
Confidence 99999999999999999999999999999999999999999999999999999999999999986432 25789999
Q ss_pred EEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEE
Q 004314 298 TVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQI 377 (761)
Q Consensus 298 ~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi 377 (761)
.++|.++|+|||++.|.+....+++.+..+++|+.++++++|++|||+++.||+..+|+||++|++++|+++|+++|+||
T Consensus 227 ~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v 306 (726)
T PRK14501 227 IVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQV 306 (726)
T ss_pred EEEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHcCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEE
Confidence 99999999999999999887777777777888888899999999999999999999999999999999999999999999
Q ss_pred ecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeec
Q 004314 378 ANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQ 457 (761)
Q Consensus 378 ~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~ 457 (761)
+.|+|.+.++|+++++++.+++++||++||+.+|.||+++.+.+++++++++|++|||||+||++||||||++||||||.
T Consensus 307 ~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~ 386 (726)
T PRK14501 307 AVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRT 386 (726)
T ss_pred ecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcC
Confidence 99998877999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCCCCCCCCCCceEEEcCCCCCcccccCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHH
Q 004314 458 GVSGSESSSESSAPKKSMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWA 537 (761)
Q Consensus 458 ~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa 537 (761)
+ +.|++|+|+++|+++++.+|++|||||++++|+||.++|+||.+|++.|+++++++|.+||+..|+
T Consensus 387 ~-------------~~g~~vls~~~G~~~~l~~~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~~~w~ 453 (726)
T PRK14501 387 D-------------GDGVLILSEMAGAAAELAEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKWA 453 (726)
T ss_pred C-------------CCceEEEecccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 3 367999999999999998999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccccccccCcccceeeeecCcccccCCHHHHHHHHHhccceeEEecCCCcCCCCC--CCCCCCCHH
Q 004314 538 RSFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDYDGTVMPQT--SINKAPSQA 615 (761)
Q Consensus 538 ~~~l~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~lDyDGTL~~~~--~~~~~p~~~ 615 (761)
++|+.++.++++.+.... ...|+.|+.+.++++|+++++|+|++||||||++.. +..+.|+++
T Consensus 454 ~~~l~~l~~~~~~~~~~~---------------~~~~~~~~~~~~~~~y~~~~~rLi~~D~DGTL~~~~~~~~~~~~~~~ 518 (726)
T PRK14501 454 SDFLDELREAAEKNKAFA---------------SKPITPAAAEEIIARYRAASRRLLLLDYDGTLVPFAPDPELAVPDKE 518 (726)
T ss_pred HHHHHHHHHHHhhhhccc---------------cccCCccCHHHHHHHHHhccceEEEEecCccccCCCCCcccCCCCHH
Confidence 999999999887653211 123567899999999999999999999999999864 245678999
Q ss_pred HHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCCCceEEccCCeEEeecCCcceeecCcCcCcchHHHHHHHHHHHhcC
Q 004314 616 VISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTES 695 (761)
Q Consensus 616 ~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~~l~liaehGa~ir~~~~~~w~~~~~~~~~~w~~~v~~im~~y~~~ 695 (761)
++++|++|++|+++.|+|+|||++..|+++|+.+ ++++|||||++++.++ ..|..... .+..|++.+.++++.|.++
T Consensus 519 ~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~-~l~liaenG~~i~~~~-~~w~~~~~-~~~~w~~~v~~il~~~~~~ 595 (726)
T PRK14501 519 LRDLLRRLAADPNTDVAIISGRDRDTLERWFGDL-PIHLVAEHGAWSRAPG-GEWQLLEP-VATEWKDAVRPILEEFVDR 595 (726)
T ss_pred HHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCC-CeEEEEeCCEEEeCCC-CceEECCC-cchhHHHHHHHHHHHHHhc
Confidence 9999999999899999999999999999999876 4899999999999764 57876432 4678999999999999999
Q ss_pred CCccEEEecCceEEEEcccCCCCCchHHHHHHHHHHHHHhcCCCcEEEeCCeEEEEEeCCCCcCC
Q 004314 696 TDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQVYIQLR 760 (761)
Q Consensus 696 t~Gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~~v~V~~G~~~vEV~p~gvnKG~ 760 (761)
++|+++|+|+++++|||+++|++++..+++++.++|+..+.+.++.+.+|+++|||+|+++|||.
T Consensus 596 ~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~ 660 (726)
T PRK14501 596 TPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGR 660 (726)
T ss_pred CCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHH
Confidence 99999999999999999999999999999999999999888888999999999999999999995
|
|
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-127 Score=1103.56 Aligned_cols=658 Identities=51% Similarity=0.916 Sum_probs=624.4
Q ss_pred CCeEEEEEcCCccceeecCCCCCeEEeecCCchhHhhhccCCCCCceEEEEccCCCCCcchhhhhHHhhccCeeEEEeec
Q 004314 60 QDRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSEQDDVSQLLLDRFKCVPAFL 139 (761)
Q Consensus 60 ~~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvG~~~~~~~~~~~~~v~~~l~~~~~~~pv~l 139 (761)
..|+|+|||+||+.+++..+++.|.|+++.+|++.++++++. .++..||||++.++++++++.+.+.++..++|+||++
T Consensus 2 ~~r~i~vsn~lp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~~~~pv~~ 80 (732)
T KOG1050|consen 2 RPRIIVVSNRLPLKASKRTDTGKWSFSFSPGSLVSQLKGIFR-EMEVKWVGPLGDELDDSEKEDVSQELLEEFDSVPVFL 80 (732)
T ss_pred CceEEEEEccCceecccccCCCceeeecCCCCchhhhhcccc-cceeeEEeeccccCchhhHhHhhhhhhhhcCceeeec
Confidence 469999999999999766667899999999999999988776 6899999999988999999999999999999999999
Q ss_pred Chhhhhhhhhcccccccccccccc-ccCCCCCCCccChHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHH
Q 004314 140 PPDILTKFYHGFCKQHLWPLFHYM-LPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFL 218 (761)
Q Consensus 140 ~~~~~~~~y~gf~~~~LWpl~H~~-~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~l 218 (761)
+++....+|+||||++|||+|||+ .+..+.+. .|+.+.|++|+.+|+.||+++++.++ ++|+|||||||||++|+++
T Consensus 81 ~~~~~~~~y~~~~~~ilwP~~hy~~~p~~~~~~-~~~~~~w~~y~~~n~~f~d~ive~~~-~~d~vwihdyhlmllp~~l 158 (732)
T KOG1050|consen 81 DDELFDSYYNGYCKSILWPLFHYMLIPSEPAFK-LFDLELWKAYVKVNQAFADKIVEVYE-EGDIVWIHDYHLMLLPQML 158 (732)
T ss_pred CCchhhhhhhhhhhhcccceeecccCCCchhhh-hhHHHHHHHHHHHhHHHHHHHHHhcc-CCCcEEEEcchhhccchhh
Confidence 999999999999999999999999 56666554 78899999999999999999999999 5799999999999999999
Q ss_pred HHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeE
Q 004314 219 RRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRT 298 (761)
Q Consensus 219 r~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~ 298 (761)
|++.++++||||+|+|||++|+|+|+|.|++||++|+++|+|||||++|+|||++||.|+++++..++.+..++.+.||.
T Consensus 159 r~~~~~~~ig~flhspfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~ 238 (732)
T KOG1050|consen 159 RERFNSAKIGFFLHSPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRD 238 (732)
T ss_pred hcccccceEEEeccCCCChHHHHHhcccHHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999888888889999999
Q ss_pred EEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEe
Q 004314 299 VGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIA 378 (761)
Q Consensus 299 ~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~ 378 (761)
+.|.++|+|||+.+|......+.+..+..+++..++|+++|++|||+|+.||+.+++.||+++|++||+|+++|+|+||+
T Consensus 239 ~~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~ 318 (732)
T KOG1050|consen 239 VSVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIE 318 (732)
T ss_pred eeeeecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecC
Q 004314 379 NPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQG 458 (761)
Q Consensus 379 ~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~ 458 (761)
.|+++++++|++++.++..++++||++||+..++||+++...++..++.++|.+||||++++++|||||+++||++|++
T Consensus 319 ~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~- 397 (732)
T KOG1050|consen 319 NPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQE- 397 (732)
T ss_pred cCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhc-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCCCCCCCCCceEEEcCCCCCcccc-cCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHH
Q 004314 459 VSGSESSSESSAPKKSMLVVSEFIGCSPSL-SGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWA 537 (761)
Q Consensus 459 ~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa 537 (761)
++.+++|+|||+|+++++ ++++++||||.+++|.+|..+|+|+++|+..|+.++++++..|++.+|+
T Consensus 398 ------------~~~~~lVlsef~G~~~tl~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~W~ 465 (732)
T KOG1050|consen 398 ------------NKKSVLVLSEFIGDDTTLEDAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVYWA 465 (732)
T ss_pred ------------ccCCceEEeeeccccccccccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHHHH
Confidence 356899999999999999 7899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccccccccCcccceeeeecCcccccCCHHHHHHHHHhccceeEEecCCCcCCCCCCCCCCCCHHHH
Q 004314 538 RSFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVI 617 (761)
Q Consensus 538 ~~~l~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~lDyDGTL~~~~~~~~~p~~~~~ 617 (761)
.+|++.+ ++||+.|+ +.+++..+ |+.+.+++.|+++++|+|++|||||+++..++. ++
T Consensus 466 ~~~~~~l---------~~~~~~~~-~~~~~~~~------l~~~~~i~~y~~s~~rli~ldyd~t~~~~~~~~------~~ 523 (732)
T KOG1050|consen 466 KSFLQGL---------KRIWKVGF-LGFRVTPL------LTAEHIVSDYKKSKKRLILLDYDLTLIPPRSIK------AI 523 (732)
T ss_pred HHHHHhh---------hhhhhhcc-cccccccc------cChhHhhhhhhhccceEEEecccccccCCCCch------HH
Confidence 9999933 45778888 88887665 788999999999999999999999999865433 99
Q ss_pred HHHHHHHhcCCCeEEEEcCCChhhHHhhccCCCCceEEccCCeEEeecCCcceeecCcCcCcchHHHHHHHHHHHhcCCC
Q 004314 618 SIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTD 697 (761)
Q Consensus 618 ~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~~l~liaehGa~ir~~~~~~w~~~~~~~~~~w~~~v~~im~~y~~~t~ 697 (761)
..|+.||+||+|+|+|+|||++..|++|+..++++|++||||+++|++++ |++.. .+.+|++.++++|++|+++||
T Consensus 524 ~~l~~L~~dp~n~v~i~s~~~r~~l~~~~~~~~~lgl~aEhG~f~r~~~~--w~~~~--~~~~w~~~v~~i~~~~~ert~ 599 (732)
T KOG1050|consen 524 SILKDLCSDPKNIVYIVSGRGRSVLEKWFFGCKNLGLAAEHGYFVRIPGK--WETCV--LDLDWKDLVKDIFQYYTERTP 599 (732)
T ss_pred HHHHHHhcCCCCeEEEEEccCchhhhhhccccccceeecccCceeccCCc--eeeec--ccccHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999965 99865 689999999999999999999
Q ss_pred ccEEEecCceEEEEcccCCCCCchHHHHHHHHHHHHHhcCCCcEEEeCCeEEEEEeCCCCcCCC
Q 004314 698 GSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQVYIQLRI 761 (761)
Q Consensus 698 Gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~~v~V~~G~~~vEV~p~gvnKG~~ 761 (761)
|||+|.|+++++|||++|||++|.+||+||.++|+. .+.++.|++|++.|||+|+|++||.+
T Consensus 600 GS~ie~k~~~l~~hy~~ad~~~g~~qA~el~~~l~~--~~~~~~v~~g~~~Vev~~~gvsk~~~ 661 (732)
T KOG1050|consen 600 GSYIERKETALVWHYRNADPEFGELQAKELLEHLES--KNEPVEVVRGKHIVEVRPQGVSKGLA 661 (732)
T ss_pred CceecccCceEEEeeeccCcchhHHHHHHHHHHhcc--cCCCeEEEecCceEEEcccccchHHH
Confidence 999999999999999999999999999999999998 78899999999999999999999853
|
|
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-120 Score=1008.79 Aligned_cols=455 Identities=27% Similarity=0.532 Sum_probs=418.9
Q ss_pred CeEEEEEcCCccceeecCCCCCeEEeecCCchhHhhhccCCCCCceEEEEccCCCCCcchhhhhHHhhccCeeEEEeecC
Q 004314 61 DRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSEQDDVSQLLLDRFKCVPAFLP 140 (761)
Q Consensus 61 ~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvG~~~~~~~~~~~~~v~~~l~~~~~~~pv~l~ 140 (761)
+|+||||||+|+... + +.+.|||+++|.+.+. ..+++||||+|...++ .+.+......+|+|.||+|+
T Consensus 2 ~rLivVSNRlp~~~~-------~--~~~~GGL~~aL~~~l~-~~~g~WvGW~g~~~~~--~~~~~~~~~~~~~~~~v~L~ 69 (474)
T PRK10117 2 SRLVVVSNRIAPPDE-------H--KASAGGLAVGILGALK-AAGGLWFGWSGETGNE--DQPLKKVKKGNITWASFNLS 69 (474)
T ss_pred CCEEEEECCCcCCCC-------C--CcCCCCcHHHHHHHHH-hcCceEEEecCCCCCC--cccchhhhcCCceEEEecCC
Confidence 689999999996321 1 3456899999988765 4799999999964322 22243333467999999999
Q ss_pred hhhhhhhhhccccccccccccccccCCCCCCCccChHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHH
Q 004314 141 PDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRR 220 (761)
Q Consensus 141 ~~~~~~~y~gf~~~~LWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~ 220 (761)
++++++||+||||++|||+|||+++. ..|++++|++|++||++||++|++.++| +|+|||||||||+||++||+
T Consensus 70 ~~~~~~yY~gfsn~~LWPlfHy~~~~-----~~~~~~~w~~Y~~VN~~FA~~v~~~~~~-~D~VWVHDYhL~llp~~LR~ 143 (474)
T PRK10117 70 EQDYDEYYNQFSNAVLWPAFHYRLDL-----VQFQRPAWEGYLRVNALLADKLLPLLKD-DDIIWIHDYHLLPFASELRK 143 (474)
T ss_pred HHHHHHHHhhhhhcchhhhhCCCCCc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeccHhhHHHHHHHH
Confidence 99999999999999999999999875 5799999999999999999999999997 59999999999999999999
Q ss_pred hcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEE
Q 004314 221 RFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVG 300 (761)
Q Consensus 221 ~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~ 300 (761)
+.|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||++++|++.... ..+.++||.++
T Consensus 144 ~~~~~~IgFFlHiPFPs~eifr~LP~r~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~---~~v~~~gr~v~ 220 (474)
T PRK10117 144 RGVNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSG---KSHTAWGKAFR 220 (474)
T ss_pred hCCCCcEEEEEeCCCCChHHHhhCCChHHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCC---CeEEECCeEEE
Confidence 999999999999999999999999999999999999999999999999999999999999875322 24678899999
Q ss_pred EEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecC
Q 004314 301 IKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANP 380 (761)
Q Consensus 301 i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p 380 (761)
|.++|+|||++.|...+..+ ...++++++++++++++|+||||+||+|||.++|+||++||++||+|+||++|+||+.|
T Consensus 221 v~~~PigID~~~~~~~a~~~-~~~~~~~lr~~~~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~p 299 (474)
T PRK10117 221 TEVYPIGIEPDEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPT 299 (474)
T ss_pred EEEEECeEcHHHHHHHhhch-HHHHHHHHHHHcCCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCC
Confidence 99999999999999877655 46678889999999999999999999999999999999999999999999999999999
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCC
Q 004314 381 ARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVS 460 (761)
Q Consensus 381 ~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~ 460 (761)
+|+++++|++++++++++|++||++||+.+|.||+|+.+.++++++.|+|++||||+|||+|||||||++||+|||.+
T Consensus 300 sR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~-- 377 (474)
T PRK10117 300 SRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP-- 377 (474)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999862
Q ss_pred CCCCCCCCCCCCCceEEEcCCCCCcccccCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHH
Q 004314 461 GSESSSESSAPKKSMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSF 540 (761)
Q Consensus 461 ~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~ 540 (761)
+++|+||+|||+||+++|++|++|||||++++|+||++||+||.+||+.|+++++++|.+||+.+|+++|
T Consensus 378 ----------~~~GvLILSefAGaA~~L~~AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~f 447 (474)
T PRK10117 378 ----------ANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECF 447 (474)
T ss_pred ----------CCCccEEEecccchHHHhCCCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHH
Confidence 3578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 004314 541 FQDMERTCK 549 (761)
Q Consensus 541 l~~l~~~~~ 549 (761)
|.+|.++..
T Consensus 448 L~~L~~~~~ 456 (474)
T PRK10117 448 ISDLKQIVP 456 (474)
T ss_pred HHHHHHhhh
Confidence 999998653
|
|
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-119 Score=1006.85 Aligned_cols=462 Identities=27% Similarity=0.474 Sum_probs=426.8
Q ss_pred EEcCCccceeecCCC-CCeEEeecCCchhHhhhccCCCCCceEEEEccCCCCCc-chh-hhhHHhhccCeeEEEeecChh
Q 004314 66 VANQLPVKAKRRPDN-KGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDL-SEQ-DDVSQLLLDRFKCVPAFLPPD 142 (761)
Q Consensus 66 vsnrlP~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~~~wvG~~~~~~~~-~~~-~~v~~~l~~~~~~~pv~l~~~ 142 (761)
||||||+.+++++++ ..|.+++++|||+++|.+.+.+..+++||||+|.+.++ ++. ..+......+|+|.||||+++
T Consensus 1 vsnRlP~~~~~~~~g~~~~~~~~s~gGL~~al~~~l~~~~~g~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 80 (487)
T TIGR02398 1 LYHRLPYDEFRGADGKLQRRDPTSPNGIIPTLLSFFGDGRAGTWVAWAEHDENSGETFDSHMTVPAEYKLTAARIPLSKE 80 (487)
T ss_pred CCcCCCceeEECCCCCceEEeccCCCchHHHHHHHhhcccceEEEeeCCCCcccccccccccccccCCceeEEEEeCCHH
Confidence 799999999987643 35888999999999999877656789999999975321 111 112222245799999999999
Q ss_pred hhhhhhhccccccccccccccccCCCCCCCccChHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHHhc
Q 004314 143 ILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRF 222 (761)
Q Consensus 143 ~~~~~y~gf~~~~LWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~ 222 (761)
+++.||+||||++|||+|||+++. ..|++++|++|++||++||++|++.++| +|+|||||||||+||++||++.
T Consensus 81 ~~~~~Y~gf~n~~LWPlfH~~~~~-----~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~d~vWVhDYhL~llp~~LR~~~ 154 (487)
T TIGR02398 81 QVDIFYHITSKEAFWPILHTFPER-----FQFREDDWQVFLKVNRAFAEAACLEAAE-GATVWVHDYNLWLVPGYIRQLR 154 (487)
T ss_pred HHHHHHhhhhhccccccccCCccc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhhHHHHHHHHhC
Confidence 999999999999999999998654 5799999999999999999999999987 5999999999999999999999
Q ss_pred CCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCc--------------
Q 004314 223 TRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRG-------------- 288 (761)
Q Consensus 223 ~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g-------------- 288 (761)
|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||+|++|+++....+
T Consensus 155 ~~~~IgfFlHiPFPs~eifr~LP~r~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~ 234 (487)
T TIGR02398 155 PDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGE 234 (487)
T ss_pred CCCeEEEEeeCCCCChHHHhhCCchHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999987654321
Q ss_pred ---eeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHHHHHHHHHHhC
Q 004314 289 ---YIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQH 365 (761)
Q Consensus 289 ---~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~ 365 (761)
.+++.++||+++|+++|+|||++.|.+....+++.++++++|++++++++|++|||||++|||.++|+||++||++|
T Consensus 235 ~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~ 314 (487)
T TIGR02398 235 ERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERLLERR 314 (487)
T ss_pred cccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHHHHHHcCCceEEEEecccccccCHHHHHHHHHHHHHhC
Confidence 23588999999999999999999999888888888889999999999999999999999999999999999999999
Q ss_pred CCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCC
Q 004314 366 PKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGM 445 (761)
Q Consensus 366 P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGm 445 (761)
|+++||++|||||.|+|++.++|++++++++++|++||++||+.+|+||+|+.+.++++++.+||++||||++||+||||
T Consensus 315 Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGm 394 (487)
T TIGR02398 315 PELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGL 394 (487)
T ss_pred ccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcccccCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHh
Q 004314 446 NLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHY 525 (761)
Q Consensus 446 nLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~ 525 (761)
|||++|||||+.+ ++||||+|||+||+++|.+|++|||||++++|+||.+||+||.+||+.||++++
T Consensus 395 NLVa~Eyva~~~~-------------~~GvLILSefaGaa~~l~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~ 461 (487)
T TIGR02398 395 NLVAKEYVAAQGL-------------LDGVLVLSEFAGAAVELKGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMF 461 (487)
T ss_pred CcchhhHHhhhcC-------------CCCCEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 9999999999973 478999999999999999999999999999999999999999999999999999
Q ss_pred hHHhhCCHHHHHHHHHHHHHH
Q 004314 526 RYVSTHDVAYWARSFFQDMER 546 (761)
Q Consensus 526 ~~v~~~~~~~Wa~~~l~~l~~ 546 (761)
++|.+||+.+|+++||.+|..
T Consensus 462 ~~v~~~d~~~W~~~fl~~l~~ 482 (487)
T TIGR02398 462 DAVNYYDVQRWADEFLAAVSP 482 (487)
T ss_pred HHHhhCCHHHHHHHHHHHhhh
Confidence 999999999999999999874
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-119 Score=1013.25 Aligned_cols=467 Identities=46% Similarity=0.866 Sum_probs=358.7
Q ss_pred eEEEEEcCCccceeecCCCCC--eEEeecCCchhHhhhccCCCCCceEEEEccCCCCCcch--hhhhHHhhccCeeEEEe
Q 004314 62 RVIIVANQLPVKAKRRPDNKG--WSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSE--QDDVSQLLLDRFKCVPA 137 (761)
Q Consensus 62 r~iivsnrlP~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~~~wvG~~~~~~~~~~--~~~v~~~l~~~~~~~pv 137 (761)
|+||||||||+.++++++.|. |+++.+.|||+.+|.+.+. ..+++||||+|.+.+..+ ++.+.+.+.++|+|+||
T Consensus 2 ~livVsnrlPv~~~r~~~~G~~~~~~~~~~ggL~~al~~l~~-~~~~~WvGw~g~~~~~~~~~~~~v~~~~~~~~~~~pV 80 (474)
T PF00982_consen 2 RLIVVSNRLPVSVKRDPDDGSWGWSWKPSAGGLVSALDPLLK-KRGGIWVGWPGVDVDEEEDEQDRVEPRLLDEYNCVPV 80 (474)
T ss_dssp -------------------------GGGGS-HHHHHHHHHHH-HH-EEEEEEEEEES-TTS---EEEE---ETTEEEEEE
T ss_pred CcccccccccccccccccccccccccccCCCcHHHHHHHHHh-cCCCEEEEeCCCcCccccccccchhhhcccCceEEEE
Confidence 799999999999999874455 8888888999999876443 589999999998766544 66677778899999999
Q ss_pred ecChhhhhhhhhccccccccccccccccCCCCCCCccChHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHH
Q 004314 138 FLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTF 217 (761)
Q Consensus 138 ~l~~~~~~~~y~gf~~~~LWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~ 217 (761)
||+++++++||+||||++|||+|||.++-.|+ ...|+.+.|++|++||++||++|++.+++ +|+|||||||||+||++
T Consensus 81 ~l~~~~~~~~Y~gf~n~~LWPlfHy~~~~~~~-~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~D~VWVhDYhL~llP~~ 158 (474)
T PF00982_consen 81 FLSPEEYDGYYNGFCNQVLWPLFHYRLDSRPD-LARFEEEWWEAYKRVNRRFADAIAEVYRP-GDLVWVHDYHLMLLPQM 158 (474)
T ss_dssp EE-HHHHHHHTTTHHHHTHHHHHTT-GG-----G----HHHHHHHHHHHHHHHHHHGGG--T-T-EEEEESGGGTTHHHH
T ss_pred EcCHHHHHHHHHhhhhhccCcccccccccccc-cchhhHHHHHHHHHHHHHHHHHHHHhCcC-CCEEEEeCCcHHHHHHH
Confidence 99999999999999999999999998762222 26899999999999999999999999996 59999999999999999
Q ss_pred HHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCe
Q 004314 218 LRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGR 297 (761)
Q Consensus 218 lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr 297 (761)
||+++|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||++||+|++|+++...+| ++.|+||
T Consensus 159 LR~~~~~~~IgfFlHiPFPs~e~fr~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~--~v~~~Gr 236 (474)
T PF00982_consen 159 LRERGPDARIGFFLHIPFPSSEIFRCLPWREEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRG--TVEYNGR 236 (474)
T ss_dssp HHHTT--SEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE---EEETTE
T ss_pred HHhhcCCceEeeEEecCCCCHHHHhhCCcHHHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCc--eEEECCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999887765 6899999
Q ss_pred EEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCC-CeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEE
Q 004314 298 TVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEG-KTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQ 376 (761)
Q Consensus 298 ~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~-~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 376 (761)
.++|.++|+|||++.|...+.++++.+++++|++++++ +++|+||||+|++|||.+||+||++||++||+++|||+|+|
T Consensus 237 ~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQ 316 (474)
T PF00982_consen 237 RVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFKGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQ 316 (474)
T ss_dssp EEEEEE------HHHHHHHHH-S---HHHHHHHHHTTT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEE
T ss_pred EEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcCCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEE
Confidence 99999999999999999998889999999999999988 59999999999999999999999999999999999999999
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeee
Q 004314 377 IANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCR 456 (761)
Q Consensus 377 i~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~ 456 (761)
|+.|+|++.++|++++++++++|++||++||+.+|+||+|+.+.++++++.|||++||||++||+|||||||++||++||
T Consensus 317 i~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q 396 (474)
T PF00982_consen 317 IAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQ 396 (474)
T ss_dssp E--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS
T ss_pred EeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCCceEEEcCCCCCccccc-CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHH
Q 004314 457 QGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAY 535 (761)
Q Consensus 457 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~ 535 (761)
++ ++|+||+|||+||+++|. +|++|||||++++|+||.+||+||++||+.|+++++++|.+||+.+
T Consensus 397 ~~-------------~~GvLiLSefaGaa~~L~~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~~~ 463 (474)
T PF00982_consen 397 DD-------------NPGVLILSEFAGAAEQLSEAALLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDVQW 463 (474)
T ss_dssp -T-------------S--EEEEETTBGGGGT-TTS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-HHH
T ss_pred cC-------------CCCceEeeccCCHHHHcCCccEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCHHH
Confidence 74 478999999999999997 6799999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 004314 536 WARSFFQDMER 546 (761)
Q Consensus 536 Wa~~~l~~l~~ 546 (761)
|+++||++|++
T Consensus 464 W~~~~l~~L~~ 474 (474)
T PF00982_consen 464 WAESFLRDLKR 474 (474)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHhhC
Confidence 99999999974
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-113 Score=943.51 Aligned_cols=466 Identities=38% Similarity=0.695 Sum_probs=430.7
Q ss_pred CCCCCeEEEEEcCCccceeecCCCCCeEEeecCCchhHhhhccCCCCCceEEEEccCCCCCcchhhhhHHhhccCeeEEE
Q 004314 57 SVAQDRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSEQDDVSQLLLDRFKCVP 136 (761)
Q Consensus 57 ~~~~~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvG~~~~~~~~~~~~~v~~~l~~~~~~~p 136 (761)
.....|+|+||||+|+...+..+++...+..+.|||+.+|++.+ ...+++|+||+|...++.+.....+....++...|
T Consensus 11 ~~~~~r~ivvsnR~p~~~~~~~~~~~~~~~~s~ggL~~~l~~~~-~~~~~~W~gw~G~~~~~~~~~~~~~~~~~~~~~~~ 89 (486)
T COG0380 11 PLEDSRLIVVSNRLPVKKTPEGDKGIEFGKRSAGGLVTALKPLL-RVDGGTWIGWSGTTGPTDESSDDLKERIGEFTSAP 89 (486)
T ss_pred cccCCcEEEEEccCCCcccccCCCcceeeccCCcchhhhcchhh-HhhcceEEecCceeccccccchhhhhccccceEEE
Confidence 45678999999999999876666667888899999999997754 46899999999976543332223333455899999
Q ss_pred eecChhhhhhhhhccccccccccccccccCCCCCCCccChHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHH
Q 004314 137 AFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPT 216 (761)
Q Consensus 137 v~l~~~~~~~~y~gf~~~~LWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~ 216 (761)
|+++.+++++||+||||++|||+|||+.+. ..|++++|.+|++||++||++|++++++ +|+||||||||+|+|+
T Consensus 90 v~l~~~~~~~~Y~~fsn~iLWP~~Hy~~~~-----~~~~~~~w~~Y~~vN~~FAd~i~~~~~~-gDiIWVhDYhL~L~P~ 163 (486)
T COG0380 90 VILSDEDYEGYYNGFSNAILWPLFHYFIDD-----VAYERNWWDAYVKVNRKFADKIVEIYEP-GDIIWVHDYHLLLVPQ 163 (486)
T ss_pred EecCHHHHHHHHHHhhHhhhcceeeeecCc-----cccchHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEEechhhhhHH
Confidence 999999999999999999999999999875 5799999999999999999999999997 5999999999999999
Q ss_pred HHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEE---
Q 004314 217 FLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLE--- 293 (761)
Q Consensus 217 ~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~--- 293 (761)
|||++.|+++||||||+|||++|+|+|||+|++||+|||+||+|||||++|++||++||+|+++.... ..+.
T Consensus 164 mlR~~~~~~~IgfFlHiPfPssEvfr~lP~r~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~~~-----~~~~~~~ 238 (486)
T COG0380 164 MLRERIPDAKIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGD-----ADIRFNG 238 (486)
T ss_pred HHHHhCCCceEEEEEeCCCCCHHHHhhCchHHHHHHHhhcCCeeEecCHHHHHHHHHHHHHhcccccc-----ccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999986411 1233
Q ss_pred EcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCC-CeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCce
Q 004314 294 YYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEG-KTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRA 372 (761)
Q Consensus 294 ~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~-~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~v 372 (761)
++|+.+++..+|+|||+..|......+.+..+..++++.+.+ +++|+||||+||+||+..+++||++||++||+|+|||
T Consensus 239 ~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kv 318 (486)
T COG0380 239 ADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKV 318 (486)
T ss_pred cCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhcCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCce
Confidence 447999999999999999999988888888889999999876 9999999999999999999999999999999999999
Q ss_pred eEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhh
Q 004314 373 VLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEY 452 (761)
Q Consensus 373 vLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea 452 (761)
+|+||+.|+|++.++|+.++.+++++|++||++||+.+|+||+|+++.++++++.+||++|||+++||+|||||||++||
T Consensus 319 vliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEy 398 (486)
T COG0380 319 VLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEY 398 (486)
T ss_pred EEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcccccCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCC
Q 004314 453 IVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHD 532 (761)
Q Consensus 453 ma~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~ 532 (761)
+||+.+ ++|+||+|||+||+.+|.+|++|||||.+++|+||++||+|+++||+.|++++++.|.+||
T Consensus 399 Va~q~~-------------~~G~LiLSeFaGaa~~L~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v~~~d 465 (486)
T COG0380 399 VAAQRD-------------KPGVLILSEFAGAASELRDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHD 465 (486)
T ss_pred HHhhcC-------------CCCcEEEeccccchhhhccCEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhh
Confidence 999873 5789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 004314 533 VAYWARSFFQDMERT 547 (761)
Q Consensus 533 ~~~Wa~~~l~~l~~~ 547 (761)
+++|+++|+.+|.+.
T Consensus 466 ~~~W~~~fl~~la~~ 480 (486)
T COG0380 466 VARWANSFLDDLAQA 480 (486)
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999999873
|
|
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-107 Score=919.84 Aligned_cols=454 Identities=38% Similarity=0.708 Sum_probs=421.5
Q ss_pred eEEEEEcCCccceeecCCCCCeEEeecCCchhHhhhccCCCCCceEEEEccCCCCCc-chhhhhHHhhccCeeEEEeecC
Q 004314 62 RVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDL-SEQDDVSQLLLDRFKCVPAFLP 140 (761)
Q Consensus 62 r~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvG~~~~~~~~-~~~~~v~~~l~~~~~~~pv~l~ 140 (761)
|+||||||+|+.+.++ + ++++.|||+++|.+.+. ..+++||||+|...++ +++..+...+..+|+|+||||+
T Consensus 1 ~livvsnr~p~~~~~~---~---~~~~~gGl~~al~~~~~-~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 73 (456)
T TIGR02400 1 RLIVVSNRLPVPITRG---G---LEPSAGGLAVALLGALK-ATGGVWFGWSGKTVEEDEGEPFLRTELEGKITLAPVFLS 73 (456)
T ss_pred CEEEEECCCCccccCC---C---CCcCCCCHHHHHHHHHh-ccCcEEEEeCCCCCCccchhhhHHHhhccCceEEEEECC
Confidence 6999999999988754 2 56678999999988665 5799999999976553 3334455556788999999999
Q ss_pred hhhhhhhhhccccccccccccccccCCCCCCCccChHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHH
Q 004314 141 PDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRR 220 (761)
Q Consensus 141 ~~~~~~~y~gf~~~~LWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~ 220 (761)
+++++.||+||||++|||+|||+++. ..|++++|++|++||++||++|++.+++ +|+|||||||||++|.+||+
T Consensus 74 ~~~~~~~y~gf~n~~lWPl~H~~~~~-----~~~~~~~w~~Y~~vN~~fA~~i~~~~~~-~d~vwvhDYhl~l~p~~lr~ 147 (456)
T TIGR02400 74 EEDVDGYYNGFSNSTLWPLFHYRPDL-----IRYDRKAWEAYRRVNRLFAEALAPLLQP-GDIVWVHDYHLMLLPAMLRE 147 (456)
T ss_pred HHHHHHHHHHhhhhhcchhhcccccc-----cccCHHHHHHHHHHHHHHHHHHHHhCCC-CCEEEEecchhhHHHHHHHh
Confidence 99999999999999999999998654 5799999999999999999999999987 59999999999999999999
Q ss_pred hcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEE
Q 004314 221 RFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVG 300 (761)
Q Consensus 221 ~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~ 300 (761)
+.|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||++++|++.... ++.+.|+.++
T Consensus 148 ~~~~~~igfFlHipfP~~e~f~~lp~r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~----~~~~~g~~~~ 223 (456)
T TIGR02400 148 LGVQNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPN----GVESGGRTVR 223 (456)
T ss_pred hCCCCeEEEEEeCCCCChHHHhhCCcHHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCC----ceEECCcEEE
Confidence 999999999999999999999999999999999999999999999999999999999999876432 3678899999
Q ss_pred EEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecC
Q 004314 301 IKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANP 380 (761)
Q Consensus 301 i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p 380 (761)
|.++|+|||++.|.+....+++.+..+++|++++++++|++|||+|+.||+..+|+||++|++++|+++++++|+||+.|
T Consensus 224 v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p 303 (456)
T TIGR02400 224 VGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVP 303 (456)
T ss_pred EEEecCcCCHHHHHHHhcChhHHHHHHHHHHHcCCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecC
Confidence 99999999999999887777777778889999999999999999999999999999999999999999999999999999
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCC
Q 004314 381 ARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVS 460 (761)
Q Consensus 381 ~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~ 460 (761)
+|+++++|+++++++++++++||++||+.+|.||+++.+.++++++.++|++|||||+||++||||||++||||||.+
T Consensus 304 ~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P-- 381 (456)
T TIGR02400 304 SRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDP-- 381 (456)
T ss_pred CccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999973
Q ss_pred CCCCCCCCCCCCCceEEEcCCCCCcccccCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHH
Q 004314 461 GSESSSESSAPKKSMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSF 540 (761)
Q Consensus 461 ~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~ 540 (761)
+.|+||+|+++|+++.+.+|++|||+|++++|+||.++|+||.+||+.|+++++++|.+||+.+|+++|
T Consensus 382 -----------~~g~vVlS~~~G~~~~l~~gllVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~ 450 (456)
T TIGR02400 382 -----------KDGVLILSEFAGAAQELNGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWREDF 450 (456)
T ss_pred -----------CCceEEEeCCCCChHHhCCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHH
Confidence 347899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH
Q 004314 541 FQDME 545 (761)
Q Consensus 541 l~~l~ 545 (761)
+.+|.
T Consensus 451 l~~l~ 455 (456)
T TIGR02400 451 LSDLN 455 (456)
T ss_pred HHHhh
Confidence 99885
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-98 Score=846.09 Aligned_cols=459 Identities=44% Similarity=0.800 Sum_probs=425.5
Q ss_pred eEEEEEcCCccceeecCCCCCeEEeecCCchhHhhhccCCCCCceEEEEccCCCCCcchhhhhHHhhccCeeEEEeecCh
Q 004314 62 RVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSEQDDVSQLLLDRFKCVPAFLPP 141 (761)
Q Consensus 62 r~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvG~~~~~~~~~~~~~v~~~l~~~~~~~pv~l~~ 141 (761)
|+||||||+|+.++++++ |.|.++++.|||+.+|.+.+. ..+++||||++.+.+.+++..+.+.+.++|+|+|||+++
T Consensus 1 ~li~vsnr~p~~~~~~~~-~~~~~~~~~ggl~~~l~~~~~-~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 78 (460)
T cd03788 1 RLVVVSNRLPVSIERDGD-GEFEARRSAGGLATALKGLLK-RTGGLWVGWSGIEEDEEEEDEVSTELLGEYTVAPVFLSP 78 (460)
T ss_pred CEEEEECCCCceeEEcCC-CceEeccCCCcHHHHHHHHHh-cCCeEEEEeCCCCCCcccchhhhhhhcCCceEEEeeCCH
Confidence 689999999999998764 689999999999999987554 579999999998776544444556678899999999999
Q ss_pred hhhhhhhhccccccccccccccccCCCCCCCccChHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHHh
Q 004314 142 DILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRR 221 (761)
Q Consensus 142 ~~~~~~y~gf~~~~LWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~ 221 (761)
++++.||+||||++|||+|||+.+. .+|++++|++|+++|++||++|++.+++ +|+||||||||+++|.+||++
T Consensus 79 ~~~~~~y~~f~~~~LWp~~H~~~~~-----~~~~~~~w~~Y~~vN~~fa~~i~~~~~~-~d~iwihDyhl~llp~~lr~~ 152 (460)
T cd03788 79 EEFEGYYNGFSNEVLWPLFHYRLDL-----ARFDREDWEAYVRVNRKFADAIAEVLRP-GDLVWVHDYHLLLLPQMLRER 152 (460)
T ss_pred HHHHHHHHHhhhhhcchhhcCCCCc-----cccCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeChhhhHHHHHHHhh
Confidence 9999999999999999999999876 5799999999999999999999999996 599999999999999999999
Q ss_pred cCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEE
Q 004314 222 FTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGI 301 (761)
Q Consensus 222 ~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i 301 (761)
.++++||||+|||||++|+|+++|+|++|+++|++||+|||||++|++||+++|+++++++.... ..+.++|+.++|
T Consensus 153 ~~~~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~---~~i~~~g~~~~i 229 (460)
T cd03788 153 GPDARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDD---GGVEYGGRRVRV 229 (460)
T ss_pred CCCCeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCC---ceEEECCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999876542 357899999999
Q ss_pred EEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCC
Q 004314 302 KIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPA 381 (761)
Q Consensus 302 ~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~ 381 (761)
.++|+|||++.|.+....++..++.++++..++++++|++|||+++.||+..+|+||++|++++|+++++++|+|||.|+
T Consensus 230 ~vip~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~ 309 (460)
T cd03788 230 GAFPIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPS 309 (460)
T ss_pred EEEeCeEcHHHHHHHhcCchhHHHHHHHHHhcCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCC
Confidence 99999999999987766556555566677777889999999999999999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCC
Q 004314 382 RGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSG 461 (761)
Q Consensus 382 r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~ 461 (761)
|+++++++++++++++++++||.+||..+|.||+++.+.++.+++.++|++|||||+||.+||||||++||||||.+
T Consensus 310 ~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p--- 386 (460)
T cd03788 310 RTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDD--- 386 (460)
T ss_pred CcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecC---
Confidence 99999999999999999999999999888999999999999999999999999999999999999999999999973
Q ss_pred CCCCCCCCCCCCceEEEcCCCCCcccccCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHH
Q 004314 462 SESSSESSAPKKSMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFF 541 (761)
Q Consensus 462 ~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l 541 (761)
++|+||+|+++|+++.+.+|++|||+|++++|++|.++|+|+++|++.|+++++++|.++|+..|+++|+
T Consensus 387 ----------~~g~vV~S~~~G~~~~~~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~~l 456 (460)
T cd03788 387 ----------DPGVLILSEFAGAAEELSGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFL 456 (460)
T ss_pred ----------CCceEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 4789999999999998888999999999999999999999999999999999999999999999999999
Q ss_pred HHH
Q 004314 542 QDM 544 (761)
Q Consensus 542 ~~l 544 (761)
.+|
T Consensus 457 ~~l 459 (460)
T cd03788 457 DDL 459 (460)
T ss_pred Hhh
Confidence 987
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-30 Score=310.00 Aligned_cols=508 Identities=14% Similarity=0.127 Sum_probs=309.4
Q ss_pred CEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHh-----------------cCcchHHHH-HHhhhcCEEeee
Q 004314 202 DYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYR-----------------TLPVREEIL-KALLNADLIGFH 263 (761)
Q Consensus 202 DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr-----------------~lp~r~~il-~~ll~~DligF~ 263 (761)
|+||-|+++-..+...|++++ ++|.+++.|+. ..+-++ .++.|-++- ..+-.||.|.-.
T Consensus 312 DvIHaHyw~sG~aa~~L~~~l-gVP~V~T~HSL--gr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIas 388 (1050)
T TIGR02468 312 YVIHGHYADAGDSAALLSGAL-NVPMVLTGHSL--GRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITS 388 (1050)
T ss_pred CEEEECcchHHHHHHHHHHhh-CCCEEEECccc--hhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEe
Confidence 899999998888888888875 68999999973 111111 012222211 236689999999
Q ss_pred CHHHHHHHHHHH-------hhhcCceeeccCceeEEEEcCe-EEEEEEeccccCcccchhhhccchH-------------
Q 004314 264 TFDYARHFLSCC-------SRMLGLEYQSKRGYIGLEYYGR-TVGIKIMPVGIHMGQIESVLRLADK------------- 322 (761)
Q Consensus 264 t~~~~~~Fl~~~-------~r~lg~~~~~~~g~~~~~~~gr-~~~i~v~P~GId~~~f~~~~~~~~~------------- 322 (761)
|......-...- .|.|.. ..++| +.++|+ ..++.|+|+|||+++|.+.....+.
T Consensus 389 T~qE~~eq~~lY~~~~~~~~~~~~~--~~~~g---v~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~ 463 (1050)
T TIGR02468 389 TRQEIEEQWGLYDGFDVILERKLRA--RARRG---VSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPD 463 (1050)
T ss_pred CHHHHHHHHHHhccCCchhhhhhhh--hhccc---ccccccCCCCeEEeCCCCcHHHccCCCccccchhccccccccccc
Confidence 987776432210 011100 01121 333332 2388999999999999874211110
Q ss_pred HHHHHHHHHHc--CCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchh----HHHHHHHHH
Q 004314 323 DWRVQELKQQF--EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKD----LEEIQAEIH 396 (761)
Q Consensus 323 ~~~~~~lr~~~--~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~----~~~l~~ev~ 396 (761)
.....+++..+ +++++|++|+|+++.||+..+|+||.++.+..+.. ++++ ++|... .... ..+...++.
T Consensus 464 ~~~~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~--nL~L-IiG~gd--d~d~l~~~~~~~l~~L~ 538 (1050)
T TIGR02468 464 PPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNRD--DIDEMSSGSSSVLTSVL 538 (1050)
T ss_pred chhhHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCC--CEEE-EEecCc--hhhhhhccchHHHHHHH
Confidence 00122344434 67889999999999999999999999986543321 2333 345311 1111 112345566
Q ss_pred HHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhc----ccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCC
Q 004314 397 ATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIA----ECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPK 472 (761)
Q Consensus 397 ~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~A----Dv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~ 472 (761)
+++++.+.. ..|.| .++++.++++++|+.| ||||+||.+|||||+++||||||.
T Consensus 539 ~li~~lgL~------g~V~F-lG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGl--------------- 596 (1050)
T TIGR02468 539 KLIDKYDLY------GQVAY-PKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGL--------------- 596 (1050)
T ss_pred HHHHHhCCC------CeEEe-cCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCC---------------
Confidence 666665421 23554 5689999999999998 699999999999999999999986
Q ss_pred CceEEEcCCCCCccccc---CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHHHHHHHHH
Q 004314 473 KSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERTCK 549 (761)
Q Consensus 473 ~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l~~~~~ 549 (761)
|+|+|..+|+.+.+. +|++|+|.|++++|++|.++|+.+ +.++...++.++.+.++++..-++.+++.+.....
T Consensus 597 --PVVASdvGG~~EII~~g~nGlLVdP~D~eaLA~AL~~LL~Dp-elr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~~~ 673 (1050)
T TIGR02468 597 --PMVATKNGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVADK-QLWAECRQNGLKNIHLFSWPEHCKTYLSRIASCRP 673 (1050)
T ss_pred --CEEEeCCCCcHHHhccCCcEEEECCCCHHHHHHHHHHHhhCH-HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhc
Confidence 999999999988873 599999999999999999999864 34555666678889999999999999988887654
Q ss_pred hhcc-cccc-----c-----cC--------cccceeeeec----Cc--cc-ccCC----HHHHHHHHH------------
Q 004314 550 DHFK-RRCW-----G-----IG--------LSFGFRVVAL----DP--NF-RKLS----IDAIVSAYL------------ 587 (761)
Q Consensus 550 ~~~~-~~~~-----~-----~g--------~g~~~~~~~~----~~--~f-~~l~----~~~i~~~y~------------ 587 (761)
.+.. ++.. . .+ ++|++.+-.- +. |. -.++ ...|.++.+
T Consensus 674 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (1050)
T TIGR02468 674 RHPQWQRDTDDGEEASEDESPGDSLRDIQDISLNLSVDGDKESNNGSSNVEGSGPPADRVAKIENAVRSWSKSPKGSSAK 753 (1050)
T ss_pred cCcccccccccccccccccCccccccccccchhhccccccccccccccccccccchhhHHHHHHHHHhhccccccccccc
Confidence 4311 0000 0 01 1111111000 00 00 0000 011111111
Q ss_pred -------------hccceeEE--ecCCCcCCCCCCCCCCCCHHHHHHHHHHHhc---CCCeEEEEcCCChhhHHhhccC-
Q 004314 588 -------------RSKSRAIL--FDYDGTVMPQTSINKAPSQAVISIINTLCND---ARNTVFVVSGRGRDCLGKWFSP- 648 (761)
Q Consensus 588 -------------~s~~rlI~--lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d---~~n~V~IvSGR~~~~L~~~f~~- 648 (761)
...+++|+ +|.|+| .. ..+-+.++++.+.++ ....++++|||+.+.+.+.+..
T Consensus 754 ~~~~~~~~~~~~~~~~~~~~via~D~d~~-~~-------~~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~~l~~~ 825 (1050)
T TIGR02468 754 AQQGSGAGKYPALRRRKRLFVIAVDCYDD-KD-------LLQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQSFLKSG 825 (1050)
T ss_pred cccccccccCccccccceEEEEEeccCCC-CC-------hHHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHHHHHhC
Confidence 11245666 999999 32 223444555555432 2366799999999999998853
Q ss_pred -CC--C-ceEEccCCeEEeecC-----Ccceee---cCcCcCcchH-HHHHHHHHHHhcCC--------CccEEEecC--
Q 004314 649 -CK--K-LGIAAEHGYFMRWSA-----DEEWQN---CGQSVDFGWI-QIAEPVMKLYTEST--------DGSYIEIKE-- 705 (761)
Q Consensus 649 -~~--~-l~liaehGa~ir~~~-----~~~w~~---~~~~~~~~w~-~~v~~im~~y~~~t--------~Gs~iE~k~-- 705 (761)
+| . -.+||.-|++|+++. +..|.. .....+..|. +.+++.+..+.... ++-..+..+
T Consensus 826 ~lp~~~PD~lI~~vGTeIyy~~~~~~~~~~~~~D~~w~~hI~~rW~ge~~r~~L~~l~~~~~~~~~~~~~~l~~Q~~~~q 905 (1050)
T TIGR02468 826 GLNPTDFDALICNSGSELYYPSLNGSEEGKLVADQDYHSHIEYRWGGEGLRKTLVKWAASINEKKGENEEQIVEEDEESS 905 (1050)
T ss_pred CCCCCCCCEEEeCCCcceeccCcCCCCCCCceECHHHHHHHHccCCcHHHHHHHHHHhhhcccccccccccceecChhhC
Confidence 33 2 237999999999862 122321 0113456784 55666665544311 333444333
Q ss_pred --ceEEEEcccCCCCCchHHHHHHHHHHHHHhcCCCcEE-Ee-CCeEEEEEeCCCCcCC
Q 004314 706 --SALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAV-KS-GQFIVEVKPQVYIQLR 760 (761)
Q Consensus 706 --~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~~v~V-~~-G~~~vEV~p~gvnKG~ 760 (761)
++++|...+. +. ....+++.+.|+.. +....+ .+ +...++|.|..+|||.
T Consensus 906 ~~~k~SY~v~d~--~~-~~~v~elr~~Lr~~--gLr~~~iys~~~~~LDVlP~~ASKgq 959 (1050)
T TIGR02468 906 TDHCYAFKVKDP--SK-VPPVKELRKLLRIQ--GLRCHAVYCRNGTRLNVIPLLASRSQ 959 (1050)
T ss_pred CCceEEEEecCc--cc-CccHHHHHHHHHhC--CCceEEEeecCCcEeeeeeCCCCHHH
Confidence 4455543332 21 11245556555532 223333 33 5589999999999983
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-31 Score=275.28 Aligned_cols=180 Identities=29% Similarity=0.498 Sum_probs=157.0
Q ss_pred CHHHHHHHHHhccceeEEecCCCcCCCCC--CCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCCCceEE
Q 004314 578 SIDAIVSAYLRSKSRAILFDYDGTVMPQT--SINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIA 655 (761)
Q Consensus 578 ~~~~i~~~y~~s~~rlI~lDyDGTL~~~~--~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~~l~li 655 (761)
....+.+.|..+++++|++||||||+++. +..+.|+++++++|++|+++++|.|+|+|||+.+.|++||+ +++++|+
T Consensus 5 ~~~~~~~~~~~a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~-v~~i~l~ 83 (266)
T COG1877 5 QSNQLLEPYLNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFG-VPGIGLI 83 (266)
T ss_pred hhhhhccccccccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcC-CCCccEE
Confidence 44567788999999999999999999977 46788999999999999999999999999999999999998 8999999
Q ss_pred ccCCeEEeecCCcceeecCcCcCcchHHHHHHHHHHHhcCCCccEEEecCceEEEEcccCCCCCchHHHHHHHHHHHHHh
Q 004314 656 AEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVL 735 (761)
Q Consensus 656 aehGa~ir~~~~~~w~~~~~~~~~~w~~~v~~im~~y~~~t~Gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l 735 (761)
||||+++|.+.+.-|....+..+..|++.+..++++|++++||+|+|.|++++.||||+++++.+..++...........
T Consensus 84 aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~ 163 (266)
T COG1877 84 AEHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINEL 163 (266)
T ss_pred EecceEEecCCCCeeEecCHHHHhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccc
Confidence 99999998887777787665667889999999999999999999999999999999999987766655554444333221
Q ss_pred cCCCcEEEeCCeEEEEEeCCCCcCCC
Q 004314 736 ANEPAAVKSGQFIVEVKPQVYIQLRI 761 (761)
Q Consensus 736 ~~~~v~V~~G~~~vEV~p~gvnKG~~ 761 (761)
.++|+.|+++|||+|.++|||.+
T Consensus 164 ---~~~v~~gk~vVEvrp~~~~KG~a 186 (266)
T COG1877 164 ---KLRVTPGKMVVELRPPGVSKGAA 186 (266)
T ss_pred ---cEEEEeCceEEEEeeCCcchHHH
Confidence 18999999999999999999963
|
|
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.1e-30 Score=266.80 Aligned_cols=165 Identities=34% Similarity=0.570 Sum_probs=124.2
Q ss_pred EecCCCcCCCCCC--CCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCCCceEEccCCeEEeecCCcceee
Q 004314 595 LFDYDGTVMPQTS--INKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQN 672 (761)
Q Consensus 595 ~lDyDGTL~~~~~--~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~~l~liaehGa~ir~~~~~~w~~ 672 (761)
||||||||+|+.+ ..+.|+++++++|++||++++|.|+|+|||+.+.++.++ .+++++|+||||++++.+++..|..
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~-~~~~i~l~gehG~e~~~~~~~~~~~ 79 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERFG-GIPNIGLAGEHGAEIRRPGGSEWTN 79 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH--S-SS-EEEEGGGTEEEETTE-EEE-
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhc-CCCCceEEEEeeEEeccCccccccc
Confidence 6999999999874 667899999999999999999999999999999966665 5789999999999999998777875
Q ss_pred cCcCcCcchHHHHHHHHHHHhcCCCccEEEecCceEEEEcccCCCCCchHHHHHHHHHHHHHhcCC-CcEEEeCCeEEEE
Q 004314 673 CGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANE-PAAVKSGQFIVEV 751 (761)
Q Consensus 673 ~~~~~~~~w~~~v~~im~~y~~~t~Gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~-~v~V~~G~~~vEV 751 (761)
.....+..|++.+.++++.|.++++|++||+|+++++||||+++++++..|++++.+++.+.+... +++++.|+++|||
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~g~~~vEv 159 (235)
T PF02358_consen 80 LPADEDLEWKDEVREILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREILASHPGLEVVPGKKVVEV 159 (235)
T ss_dssp TTGGGGHHHHHHHHHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHHHHHH-T-EEEE-SSEEEE
T ss_pred cccccchHHHHHHHHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHHHHhCCCEEEEECCCEEEE
Confidence 444556789999999999999999999999999999999999999999999999999999877765 7999999999999
Q ss_pred EeCCCCcCC
Q 004314 752 KPQVYIQLR 760 (761)
Q Consensus 752 ~p~gvnKG~ 760 (761)
+|.+++||.
T Consensus 160 rp~~~~KG~ 168 (235)
T PF02358_consen 160 RPPGVNKGS 168 (235)
T ss_dssp E-TT--HHH
T ss_pred EeCCCChHH
Confidence 999999985
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.7e-25 Score=246.32 Aligned_cols=301 Identities=16% Similarity=0.147 Sum_probs=209.7
Q ss_pred hHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhh
Q 004314 176 RSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALL 255 (761)
Q Consensus 176 ~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll 255 (761)
...+..|...++.++.++....+ .|+||+|+++.+.++...+. .++|++++.|+++.... + .....+.+.+.
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~--~Dvv~~h~~~~~~~~~~~~~--~~~~~i~~~H~~~~~~~--~--~~~~~~~~~~~ 134 (372)
T cd03792 63 EEEKEIYLEWNEENAERPLLDLD--ADVVVIHDPQPLALPLFKKK--RGRPWIWRCHIDLSSPN--R--RVWDFLQPYIE 134 (372)
T ss_pred HHHHHHHHHHHHHHhccccccCC--CCEEEECCCCchhHHHhhhc--CCCeEEEEeeeecCCCc--H--HHHHHHHHHHH
Confidence 45678888888888776433323 49999999998777666543 36788899999875321 0 01122333345
Q ss_pred hcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc--
Q 004314 256 NADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF-- 333 (761)
Q Consensus 256 ~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~-- 333 (761)
.+|.+.+.+.++++.+ +..+ .+ ++|+|||+........ .......+++++
T Consensus 135 ~~d~~i~~~~~~~~~~----------------------~~~~--~~-vipngvd~~~~~~~~~---~~~~~~~~~~~~~~ 186 (372)
T cd03792 135 DYDAAVFHLPEYVPPQ----------------------VPPR--KV-IIPPSIDPLSGKNREL---SPADIEYILEKYGI 186 (372)
T ss_pred hCCEEeecHHHhcCCC----------------------CCCc--eE-EeCCCCCCCccccCCC---CHHHHHHHHHHhCC
Confidence 6788777663322111 0112 23 8999999754211111 112234455556
Q ss_pred -CCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCc
Q 004314 334 -EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYE 412 (761)
Q Consensus 334 -~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~ 412 (761)
+++++|++|||+++.||+..+++|++.+.+++|+++ |+++|..... .++..++. +++.++.+. ..
T Consensus 187 ~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~----l~i~G~g~~~-~~~~~~~~---~~~~~~~~~------~~ 252 (372)
T cd03792 187 DPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQ----LVLVGSGATD-DPEGWIVY---EEVLEYAEG------DP 252 (372)
T ss_pred CCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCE----EEEEeCCCCC-CchhHHHH---HHHHHHhCC------CC
Confidence 478899999999999999999999999988888765 8888854321 12222322 233322221 12
Q ss_pred cEEEEcCC-CCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc--
Q 004314 413 PVVFIDKP-VTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-- 489 (761)
Q Consensus 413 pV~~~~~~-v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-- 489 (761)
.|.+++.. ++.+++.++|++||+|++||.+||||++++||||||. |+|+|+.+|..+.+.
T Consensus 253 ~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G~-----------------Pvv~s~~~~~~~~i~~~ 315 (372)
T cd03792 253 DIHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKGK-----------------PVIAGPVGGIPLQIEDG 315 (372)
T ss_pred CeEEEecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcCC-----------------CEEEcCCCCchhhcccC
Confidence 47776543 4899999999999999999999999999999999976 999999999888773
Q ss_pred -CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHH-hhCCHHHHHHHHHHHHHH
Q 004314 490 -GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYV-STHDVAYWARSFFQDMER 546 (761)
Q Consensus 490 -~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~Wa~~~l~~l~~ 546 (761)
.|+++++ .+++|++|.++++++ ++++.+.++.++++ ..+++...++++++.+++
T Consensus 316 ~~g~~~~~--~~~~a~~i~~ll~~~-~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 316 ETGFLVDT--VEEAAVRILYLLRDP-ELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred CceEEeCC--cHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 3788874 678999999999864 46667777788887 478999999999887764
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-25 Score=240.63 Aligned_cols=167 Identities=21% Similarity=0.306 Sum_probs=138.9
Q ss_pred HhccceeEEecCCCcCCCCC--CCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCCCceEEccCCeEEee
Q 004314 587 LRSKSRAILFDYDGTVMPQT--SINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRW 664 (761)
Q Consensus 587 ~~s~~rlI~lDyDGTL~~~~--~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~~l~liaehGa~ir~ 664 (761)
.++++++|||||||||+|+. |..+.++++++++|++|++ +..|+|+|||+++.|.++++ +++++++|+||++++.
T Consensus 94 ~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~~~-~~~l~laGsHG~e~~~ 170 (354)
T PLN02151 94 SEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAK--CFPTAIVSGRCREKVSSFVK-LTELYYAGSHGMDIKG 170 (354)
T ss_pred hcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHhc--CCCEEEEECCCHHHHHHHcC-CccceEEEeCCceeec
Confidence 56678999999999999986 4567899999999999996 46899999999999999997 5679999999999997
Q ss_pred cC-Ccceee----cCcCcCcchHHHHHHHHHHH---hcCCCccEEEecCceEEEEcccCCCCCchHHHHHHHHHHHHHhc
Q 004314 665 SA-DEEWQN----CGQSVDFGWIQIAEPVMKLY---TESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLA 736 (761)
Q Consensus 665 ~~-~~~w~~----~~~~~~~~w~~~v~~im~~y---~~~t~Gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~ 736 (761)
++ +..|+. .....+..|...+.++++.+ +.++||++||+|+++++||||+++++ ++.++..++..++.
T Consensus 171 p~~g~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~slavHYR~a~~~----~~~~l~~~l~~v~~ 246 (354)
T PLN02151 171 PEQGSKYKKENQSLLCQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCASVHFRCVEEN----KWSDLANQVRSVLK 246 (354)
T ss_pred CCCCccccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEeCCCChH----HHHHHHHHHHHHHh
Confidence 63 345641 11123567888888877665 47899999999999999999999765 34567788888777
Q ss_pred CCC-cEEEeCCeEEEEEeC-CCCcCC
Q 004314 737 NEP-AAVKSGQFIVEVKPQ-VYIQLR 760 (761)
Q Consensus 737 ~~~-v~V~~G~~~vEV~p~-gvnKG~ 760 (761)
+.+ +.+..|++++||+|. ++|||+
T Consensus 247 ~~~~l~v~~GkkVvEvrP~~~~dKG~ 272 (354)
T PLN02151 247 NYPKLMLTQGRKVLEIRPIIKWDKGK 272 (354)
T ss_pred hCCCcEEecCCEEEEEeCCCCCCHHH
Confidence 766 799999999999996 999995
|
|
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.7e-24 Score=245.79 Aligned_cols=293 Identities=20% Similarity=0.260 Sum_probs=199.9
Q ss_pred CCEEEEeCCccchHHHHHHHhc----CCCeEEEEEecC-----CCchhHHhcC--cch-------------HHHHHHhhh
Q 004314 201 DDYVWIHDYHLMVLPTFLRRRF----TRLRMGFFLHSP-----FPSSEIYRTL--PVR-------------EEILKALLN 256 (761)
Q Consensus 201 ~DiVwvhDyhl~llp~~lr~~~----~~~~ig~flH~P-----fP~~e~fr~l--p~r-------------~~il~~ll~ 256 (761)
-|+||.||+|..++|.++++++ .++++.++.|.. || .+.+..+ |.. .-+-.++..
T Consensus 119 pDiiH~h~w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (466)
T PRK00654 119 PDIVHAHDWHTGLIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFP-AEILGELGLPAEAFHLEGLEFYGQISFLKAGLYY 197 (466)
T ss_pred CceEEECCcHHHHHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCC-HHHHHHcCCChHHcCchhhhcCCcccHHHHHHHh
Confidence 3999999999999999998763 468999999986 22 1111111 110 112234567
Q ss_pred cCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEE--EEcCeEEEEEEeccccCcccchhhhcc-----------chHH
Q 004314 257 ADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGL--EYYGRTVGIKIMPVGIHMGQIESVLRL-----------ADKD 323 (761)
Q Consensus 257 ~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~--~~~gr~~~i~v~P~GId~~~f~~~~~~-----------~~~~ 323 (761)
||.|...+..+++.... ...|. ++ .+..+..++.++|+|||++.|.+.... ....
T Consensus 198 ad~vitvS~~~~~ei~~---~~~~~---------gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~ 265 (466)
T PRK00654 198 ADRVTTVSPTYAREITT---PEFGY---------GLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKA 265 (466)
T ss_pred cCcCeeeCHHHHHHhcc---ccCCc---------ChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhhhchH
Confidence 77777777766655321 00000 00 011133478899999999988753210 0112
Q ss_pred HHHHHHHHHcC----CCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHH
Q 004314 324 WRVQELKQQFE----GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATC 399 (761)
Q Consensus 324 ~~~~~lr~~~~----~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv 399 (761)
+..+.+++++. +.++|++|||+++.||+..+++|+++++++ + +.|+++|. |+ ..+++++++++
T Consensus 266 ~~k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~----~~lvivG~-----g~--~~~~~~l~~l~ 332 (466)
T PRK00654 266 ENKRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQ--G----GQLVLLGT-----GD--PELEEAFRALA 332 (466)
T ss_pred HHHHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhc--C----CEEEEEec-----Cc--HHHHHHHHHHH
Confidence 22345677762 568999999999999999999999998753 3 44887773 22 13456677777
Q ss_pred HHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEc
Q 004314 400 KRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVS 479 (761)
Q Consensus 400 ~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~S 479 (761)
++.+. .++++.+. +.+....+|+.||++|+||.+||||++.+|||+||. |+|+|
T Consensus 333 ~~~~~--------~v~~~~g~-~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G~-----------------p~V~~ 386 (466)
T PRK00654 333 ARYPG--------KVGVQIGY-DEALAHRIYAGADMFLMPSRFEPCGLTQLYALRYGT-----------------LPIVR 386 (466)
T ss_pred HHCCC--------cEEEEEeC-CHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHCCC-----------------CEEEe
Confidence 65431 25555443 566678999999999999999999999999999976 88999
Q ss_pred CCCCCcccc-c--------CcEEECCCCHHHHHHHHHHHHcCC--HHHHHHHHHHHhhHHhhCCHHHHHHHHHHHHHHH
Q 004314 480 EFIGCSPSL-S--------GAIRVNPWNIEATAEAMHEAIQMN--EAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERT 547 (761)
Q Consensus 480 e~~G~~~~l-~--------~al~VnP~d~~~~A~ai~~aL~m~--~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l~~~ 547 (761)
+.+|+.+.+ + +|++|+|.|+++++++|.++++.. ++.++.+.++.. ...+++..-++++++-.+++
T Consensus 387 ~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~lY~~~ 463 (466)
T PRK00654 387 RTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQAM--AQDFSWDKSAEEYLELYRRL 463 (466)
T ss_pred CCCCccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCChHHHHHHHHHHHHHH
Confidence 999999987 2 389999999999999999998732 222333222222 25678888888887766554
|
|
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.1e-24 Score=235.24 Aligned_cols=269 Identities=20% Similarity=0.263 Sum_probs=202.0
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcC
Q 004314 201 DDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLG 280 (761)
Q Consensus 201 ~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg 280 (761)
.|+|++|+.. .+...++++.|++++.+.+|..|.. +. + -.++.|.+.+.... .++. +..
T Consensus 100 ~~vi~v~~~~--~~~~~~~~~~~~~~~v~~~h~~~~~-~~----------~---~~~~~ii~~S~~~~-~~~~---~~~- 158 (380)
T PRK15484 100 DSVIVIHNSM--KLYRQIRERAPQAKLVMHMHNAFEP-EL----------L---DKNAKIIVPSQFLK-KFYE---ERL- 158 (380)
T ss_pred CcEEEEeCcH--HhHHHHHhhCCCCCEEEEEecccCh-hH----------h---ccCCEEEEcCHHHH-HHHH---hhC-
Confidence 5999999843 4446678889999999999987631 11 1 23577777665433 3332 111
Q ss_pred ceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc---CCCeEEEeecCccccCChHHHHHH
Q 004314 281 LEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIFKGVDLKLLA 357 (761)
Q Consensus 281 ~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi~~~l~A 357 (761)
...++.++|+|||.+.|.+.. ...+++++ +++++|+++||+.+.||+..+++|
T Consensus 159 ----------------~~~~i~vIpngvd~~~~~~~~--------~~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A 214 (380)
T PRK15484 159 ----------------PNADISIVPNGFCLETYQSNP--------QPNLRQQLNISPDETVLLYAGRISPDKGILLLMQA 214 (380)
T ss_pred ----------------CCCCEEEecCCCCHHHcCCcc--------hHHHHHHhCCCCCCeEEEEeccCccccCHHHHHHH
Confidence 112467899999998886421 12233444 367899999999999999999999
Q ss_pred HHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccce
Q 004314 358 MEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVV 437 (761)
Q Consensus 358 ~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~v 437 (761)
+.++.+++|+++ |+++|.+......+..++++++.+++.+++. .|++ .+.++.+++..+|+.||++|
T Consensus 215 ~~~l~~~~p~~~----lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~--------~v~~-~G~~~~~~l~~~~~~aDv~v 281 (380)
T PRK15484 215 FEKLATAHSNLK----LVVVGDPTASSKGEKAAYQKKVLEAAKRIGD--------RCIM-LGGQPPEKMHNYYPLADLVV 281 (380)
T ss_pred HHHHHHhCCCeE----EEEEeCCccccccchhHHHHHHHHHHHhcCC--------cEEE-eCCCCHHHHHHHHHhCCEEE
Confidence 999999999876 8888865432222334567777777766541 3655 46789999999999999999
Q ss_pred eccc-ccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcE-EECCCCHHHHHHHHHHHHcC
Q 004314 438 VTAV-RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAI-RVNPWNIEATAEAMHEAIQM 512 (761)
Q Consensus 438 vtS~-~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al-~VnP~d~~~~A~ai~~aL~m 512 (761)
+||. .||||++++||||||. |+|+|..+|+.+.+. .|+ +++|.|++++|++|.+++++
T Consensus 282 ~pS~~~E~f~~~~lEAma~G~-----------------PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d 344 (380)
T PRK15484 282 VPSQVEEAFCMVAVEAMAAGK-----------------PVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTLAD 344 (380)
T ss_pred eCCCCccccccHHHHHHHcCC-----------------CEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHHcC
Confidence 9997 5999999999999976 999999999888773 365 67899999999999999997
Q ss_pred CHHHHHHHHHHHhhHH-hhCCHHHHHHHHHHHHHH
Q 004314 513 NEAEKQLRHEKHYRYV-STHDVAYWARSFFQDMER 546 (761)
Q Consensus 513 ~~~er~~r~~~~~~~v-~~~~~~~Wa~~~l~~l~~ 546 (761)
++ ++.+.++.++++ .++++..-++++++.++.
T Consensus 345 ~~--~~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~ 377 (380)
T PRK15484 345 PE--LTQIAEQAKDFVFSKYSWEGVTQRFEEQIHN 377 (380)
T ss_pred HH--HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 64 345666777665 678999999999888865
|
|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.5e-24 Score=248.63 Aligned_cols=298 Identities=14% Similarity=0.136 Sum_probs=208.0
Q ss_pred CEEEEeCCccchHHHHHHHh-----cCCCeEEEEEecC-----CCchhHH-hcCcch---------------HHHH-HHh
Q 004314 202 DYVWIHDYHLMVLPTFLRRR-----FTRLRMGFFLHSP-----FPSSEIY-RTLPVR---------------EEIL-KAL 254 (761)
Q Consensus 202 DiVwvhDyhl~llp~~lr~~-----~~~~~ig~flH~P-----fP~~e~f-r~lp~r---------------~~il-~~l 254 (761)
||||+||+|..++|.++.+. +.++++.|++|.- ||...+- ..+|+. -.++ -++
T Consensus 612 DIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d~le~~~~~~iN~LK~GI 691 (977)
T PLN02939 612 DIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQDNAHGRINVVKGAI 691 (977)
T ss_pred CEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccChhhhhhccCCchHHHHHHH
Confidence 89999999999985544432 3567899999965 3322221 112211 1123 357
Q ss_pred hhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhcc-----------chHH
Q 004314 255 LNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRL-----------ADKD 323 (761)
Q Consensus 255 l~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~-----------~~~~ 323 (761)
..||.|..-++.|++.-++ ..--|++. .+..+..++.++|+|||++.|.+.... ....
T Consensus 692 v~AD~VtTVSptYA~EI~t--e~G~GL~~---------~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl~GK~ 760 (977)
T PLN02939 692 VYSNIVTTVSPTYAQEVRS--EGGRGLQD---------TLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKA 760 (977)
T ss_pred HhCCeeEeeeHHHHHHHHH--HhccchHH---------HhccccCCceEEecceehhhcCCccccccccccChhhhhhhh
Confidence 7899999999999988654 11111110 122345678899999999998764210 0011
Q ss_pred HHHHHHHHHcC------CCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHH
Q 004314 324 WRVQELKQQFE------GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHA 397 (761)
Q Consensus 324 ~~~~~lr~~~~------~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~ 397 (761)
.....++++++ +.++|++|||+++.||+..+++|+.++++ ++ +.||++|. |++ ..+++++.+
T Consensus 761 ~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~d----vqLVIvGd-----Gp~-~~~e~eL~~ 828 (977)
T PLN02939 761 ANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LG----GQFVLLGS-----SPV-PHIQREFEG 828 (977)
T ss_pred hhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cC----CEEEEEeC-----CCc-HHHHHHHHH
Confidence 22345777772 35899999999999999999999998875 33 34887773 332 245566777
Q ss_pred HHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEE
Q 004314 398 TCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLV 477 (761)
Q Consensus 398 lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV 477 (761)
++.+++.. ..|.|+ +.++......+|+.||+||+||.+|||||+++|||+||. |+|
T Consensus 829 La~~l~l~------drV~Fl-G~~de~lah~IYAaADIFLmPSr~EPfGLvqLEAMAyGt-----------------PPV 884 (977)
T PLN02939 829 IADQFQSN------NNIRLI-LKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAMRYGS-----------------VPI 884 (977)
T ss_pred HHHHcCCC------CeEEEE-eccCHHHHHHHHHhCCEEEECCCccCCcHHHHHHHHCCC-----------------CEE
Confidence 77765421 246665 467777788999999999999999999999999999975 888
Q ss_pred EcCCCCCccccc------------CcEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHhhHHhhCCHHHHHHHHHH
Q 004314 478 VSEFIGCSPSLS------------GAIRVNPWNIEATAEAMHEAIQ---MNEAEKQLRHEKHYRYVSTHDVAYWARSFFQ 542 (761)
Q Consensus 478 ~Se~~G~~~~l~------------~al~VnP~d~~~~A~ai~~aL~---m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~ 542 (761)
++..+|+.+.+. +|++++|.|+++++++|.+++. ..++.++.+.++. ....+++...++.+++
T Consensus 885 Vs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~a--m~~dFSWe~~A~qYee 962 (977)
T PLN02939 885 VRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKD--MNIDFSWDSSASQYEE 962 (977)
T ss_pred EecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHH--HHhcCCHHHHHHHHHH
Confidence 999999987662 4899999999999999999986 2333333333322 2367899999999887
Q ss_pred HHHHHH
Q 004314 543 DMERTC 548 (761)
Q Consensus 543 ~l~~~~ 548 (761)
-..++.
T Consensus 963 LY~~ll 968 (977)
T PLN02939 963 LYQRAV 968 (977)
T ss_pred HHHHHH
Confidence 666554
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.5e-25 Score=231.77 Aligned_cols=166 Identities=30% Similarity=0.411 Sum_probs=140.9
Q ss_pred ccceeEEecCCCcCCCCC--CCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCCCceEEccCCeEEeecC
Q 004314 589 SKSRAILFDYDGTVMPQT--SINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSA 666 (761)
Q Consensus 589 s~~rlI~lDyDGTL~~~~--~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~~l~liaehGa~ir~~~ 666 (761)
+++++|+|||||||++.. |....|++++++.|++|++++++.|+|+|||+...+.+.+. +++++++|+||++++.++
T Consensus 1 ~~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~~-~~~~~l~g~hG~~~~~~g 79 (244)
T TIGR00685 1 ARKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGVK-LPGLGLAGEHGCEMKDNG 79 (244)
T ss_pred CCcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccCC-CCceeEEeecCEEEecCC
Confidence 578999999999999965 45677899999999999999999999999999999887764 578999999999998743
Q ss_pred Cc-ceeecCcCcCcchHHHHHHHHHHHhcCCCccEEEecCceEEEEcccC-CCCCchHHHHHHHHHHHHHhcCCCcEEEe
Q 004314 667 DE-EWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDA-DPGFGSSQAKELLDHLESVLANEPAAVKS 744 (761)
Q Consensus 667 ~~-~w~~~~~~~~~~w~~~v~~im~~y~~~t~Gs~iE~k~~~l~~hyr~a-d~d~~~~qa~el~~~L~~~l~~~~v~V~~ 744 (761)
.. .|.... .....|++.+.++++.+.++ ||+++|+|+++++||||++ +++++..|+.++..++.. ..++.|..
T Consensus 80 ~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~-pG~~iE~K~~s~~~hyr~a~d~~~~~~~~~~~~~~~~~---~~~~~v~~ 154 (244)
T TIGR00685 80 SCQDWVNLT-EKIPSWKVRANELREEITTR-PGVFIERKGVALAWHYRQAPVPELARFRAKELKEKILS---FTDLEVMD 154 (244)
T ss_pred Ccceeeech-hhhhhHHHHHHHHHHHHhcC-CCcEEEecceEEEEEeccCCCcHHHHHHHHHHHHHHhc---CCCEEEEE
Confidence 32 355421 22247999999999999887 9999999999999999999 888888888888777643 34689999
Q ss_pred CCeEEEEEeCCCCcCC
Q 004314 745 GQFIVEVKPQVYIQLR 760 (761)
Q Consensus 745 G~~~vEV~p~gvnKG~ 760 (761)
|+.++|++|.++|||.
T Consensus 155 g~~~~e~~p~~~~Kg~ 170 (244)
T TIGR00685 155 GKAVVELKPRFVNKGE 170 (244)
T ss_pred CCeEEEEeeCCCCHHH
Confidence 9999999999999985
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.4e-25 Score=241.37 Aligned_cols=169 Identities=22% Similarity=0.310 Sum_probs=137.3
Q ss_pred HHHHhccceeEEecCCCcCCCCC--CCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCCCceEEccCCeE
Q 004314 584 SAYLRSKSRAILFDYDGTVMPQT--SINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYF 661 (761)
Q Consensus 584 ~~y~~s~~rlI~lDyDGTL~~~~--~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~~l~liaehGa~ 661 (761)
.+|.++++++|||||||||+|+. |..+.++++++++|++|+++ ..|+|||||+++.|++|++. ++++++|+||++
T Consensus 112 ~~~~~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~--~~VAIVSGR~~~~L~~~l~~-~~l~laGsHG~e 188 (384)
T PLN02580 112 ANFAKGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKY--FPTAIISGRSRDKVYELVGL-TELYYAGSHGMD 188 (384)
T ss_pred HHHhhcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhC--CCEEEEeCCCHHHHHHHhCC-CCccEEEeCCce
Confidence 47899999999999999999987 46789999999999999986 46999999999999999985 579999999999
Q ss_pred EeecCC----cceeec-------------CcCcCcchHHHHHHHHHH---HhcCCCccEEEecCceEEEEcccCCCCCch
Q 004314 662 MRWSAD----EEWQNC-------------GQSVDFGWIQIAEPVMKL---YTESTDGSYIEIKESALVWHHRDADPGFGS 721 (761)
Q Consensus 662 ir~~~~----~~w~~~-------------~~~~~~~w~~~v~~im~~---y~~~t~Gs~iE~k~~~l~~hyr~ad~d~~~ 721 (761)
++.+.+ ..|..+ .+ ....|...+.++++. ++.+++|++||+|+++++||||+++++++.
T Consensus 189 ~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~-~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K~~svavHYR~a~~~~~~ 267 (384)
T PLN02580 189 IMGPVRESVSNDHPNCIKSTDQQGKEVNLFQ-PASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYRNVDEKNWP 267 (384)
T ss_pred eecCCCCcccccccccccccccccccccccc-cchhhhhhHHHHHHHHHHHhccCCCCEEEecCcEEEEEeCCCCchHHH
Confidence 987521 123221 11 245688666666655 566789999999999999999999888766
Q ss_pred HHHHHHHHHHHHHhcCCC-cEEEeCCeEEEEEe-CCCCcCC
Q 004314 722 SQAKELLDHLESVLANEP-AAVKSGQFIVEVKP-QVYIQLR 760 (761)
Q Consensus 722 ~qa~el~~~L~~~l~~~~-v~V~~G~~~vEV~p-~gvnKG~ 760 (761)
.++.++...+. +.+ +.+..|++++||+| .++|||.
T Consensus 268 ~~~~~l~~~l~----~~~~l~v~~Gk~vlEVrP~~g~~KG~ 304 (384)
T PLN02580 268 LVAQCVHDVLK----KYPRLRLTHGRKVLEVRPVIDWNKGK 304 (384)
T ss_pred HHHHHHHHHHH----hCCceEEEeCCeEEEEecCCCCCHHH
Confidence 66666655543 344 88999999999999 5999995
|
|
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-23 Score=250.89 Aligned_cols=308 Identities=14% Similarity=0.112 Sum_probs=218.0
Q ss_pred HHHHHHHHHHHHHHHHHH-hCCCCCEEEEeCCccchHHHHHHHh-----cCCCeEEEEEecCCCchhHHhcCcchHHHHH
Q 004314 179 WEAYVSANKIFSQRVIEV-INPEDDYVWIHDYHLMVLPTFLRRR-----FTRLRMGFFLHSPFPSSEIYRTLPVREEILK 252 (761)
Q Consensus 179 w~~Y~~vN~~fa~~i~~~-~~~~~DiVwvhDyhl~llp~~lr~~-----~~~~~ig~flH~PfP~~e~fr~lp~r~~il~ 252 (761)
..-|.-+++..++.+... ..| ||||+||+|..++|.++++. +.++++.++.|..- |. ...+-.
T Consensus 689 ~~RF~~F~~Aale~l~~~~~~P--DIIHaHDW~talva~llk~~~~~~~~~~~p~V~TiHnl~-----~~----~n~lk~ 757 (1036)
T PLN02316 689 GERFGFFCHAALEFLLQSGFHP--DIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFTIHNLE-----FG----ANHIGK 757 (1036)
T ss_pred HHHHHHHHHHHHHHHHhcCCCC--CEEEECCChHHHHHHHHHHhhhhhccCCCCEEEEeCCcc-----cc----hhHHHH
Confidence 344554455555544332 134 89999999999999999875 35689999999642 11 122345
Q ss_pred HhhhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhcc--c----------
Q 004314 253 ALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRL--A---------- 320 (761)
Q Consensus 253 ~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~--~---------- 320 (761)
++..||.|.--+..|++..+.. .. ...+..++.++|+|||++.|.+.... |
T Consensus 758 ~l~~AD~ViTVS~tya~EI~~~----~~-------------l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~ 820 (1036)
T PLN02316 758 AMAYADKATTVSPTYSREVSGN----SA-------------IAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVE 820 (1036)
T ss_pred HHHHCCEEEeCCHHHHHHHHhc----cC-------------cccccCCEEEEECCccccccCCcccccccccCCchhhhh
Confidence 6778999999999988776531 00 01123477899999999988653210 0
Q ss_pred hHHHHHHHHHHHcC----CCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHH
Q 004314 321 DKDWRVQELKQQFE----GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIH 396 (761)
Q Consensus 321 ~~~~~~~~lr~~~~----~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~ 396 (761)
........+++++. +.++|++|+||++.||+..+++|+.++++. + +.||++|. |++ ..++.++.
T Consensus 821 gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~--~----~qlVIvG~-----Gpd-~~~e~~l~ 888 (1036)
T PLN02316 821 GKRAAKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLER--N----GQVVLLGS-----APD-PRIQNDFV 888 (1036)
T ss_pred hhhhhHHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhhc--C----cEEEEEeC-----CCC-HHHHHHHH
Confidence 01122345777772 578999999999999999999999999863 3 34777773 343 34567788
Q ss_pred HHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceE
Q 004314 397 ATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSML 476 (761)
Q Consensus 397 ~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~l 476 (761)
+++.+++..+.. .|.|.. ..+......+|++||+||+||..|||||+.+|||+||. |+
T Consensus 889 ~La~~Lg~~~~~----rV~f~g-~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~Gt-----------------pp 946 (1036)
T PLN02316 889 NLANQLHSSHHD----RARLCL-TYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYGS-----------------IP 946 (1036)
T ss_pred HHHHHhCccCCC----eEEEEe-cCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHcCC-----------------Ce
Confidence 888877644321 366553 34444445899999999999999999999999999976 88
Q ss_pred EEcCCCCCcccc-c---------------CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHH-hhCCHHHHHHH
Q 004314 477 VVSEFIGCSPSL-S---------------GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYV-STHDVAYWARS 539 (761)
Q Consensus 477 V~Se~~G~~~~l-~---------------~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~Wa~~ 539 (761)
|+|..+|..+.+ + +|++|+|.|+++++++|.++|......+....+..++.+ ..+++..-++.
T Consensus 947 Vvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~ 1026 (1036)
T PLN02316 947 VVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALD 1026 (1036)
T ss_pred EEEcCCCcHhhccccccccccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHH
Confidence 889999999887 2 389999999999999999999865322333233444444 45888888998
Q ss_pred HHHHHHHHH
Q 004314 540 FFQDMERTC 548 (761)
Q Consensus 540 ~l~~l~~~~ 548 (761)
|++-.+++.
T Consensus 1027 Y~~LY~~a~ 1035 (1036)
T PLN02316 1027 YMELYHSAR 1035 (1036)
T ss_pred HHHHHHHHh
Confidence 887766654
|
|
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.9e-24 Score=239.37 Aligned_cols=296 Identities=16% Similarity=0.130 Sum_probs=191.4
Q ss_pred CEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchh--HHh------------cCcchHHH-HHHhhhcCEEeeeCHH
Q 004314 202 DYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSE--IYR------------TLPVREEI-LKALLNADLIGFHTFD 266 (761)
Q Consensus 202 DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e--~fr------------~lp~r~~i-l~~ll~~DligF~t~~ 266 (761)
|+|++|+++..++..++++.. ++|+.++.|....... +.. .+..+-.+ ...+..+|.|...+..
T Consensus 116 DvIH~h~~~~~~~~~~~~~~~-~~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~ 194 (439)
T TIGR02472 116 DLIHAHYADAGYVGARLSRLL-GVPLIFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIEAEEETLAHASLVITSTHQ 194 (439)
T ss_pred CEEEEcchhHHHHHHHHHHHh-CCCEEEecccccchhhhhcccCCCChhhhhhhcchHHHHHHHHHHHHhCCEEEECCHH
Confidence 999999988777777776654 6789999997532210 000 00111001 1223456766655543
Q ss_pred HHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc--CCCeEEEeecC
Q 004314 267 YARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF--EGKTVLLGVDD 344 (761)
Q Consensus 267 ~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~--~~~~vil~VdR 344 (761)
.+..-+. ...+ -...++.++|+|||++.|.+....++.......+++.. +++++|++|||
T Consensus 195 ~~~~~~~---~~~~---------------~~~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vGr 256 (439)
T TIGR02472 195 EIEEQYA---LYDS---------------YQPERMQVIPPGVDLSRFYPPQSSEETSEIDNLLAPFLKDPEKPPILAISR 256 (439)
T ss_pred HHHHHHH---hccC---------------CCccceEEECCCcChhhcCCCCccccchhHHHHHHhhccccCCcEEEEEcC
Confidence 3222110 0001 12347889999999999975422111111112222222 46789999999
Q ss_pred ccccCChHHHHHHHHHHHHhCCCCcCceeEEEEec-CCCCCch-hHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCC
Q 004314 345 MDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIAN-PARGRGK-DLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVT 422 (761)
Q Consensus 345 ld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~-p~r~~~~-~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~ 422 (761)
+++.||+..+|+||.++.+..+.. ++++ ++|. +.+.... ...++.+++.+++++++- .+ .|. +.+.++
T Consensus 257 l~~~Kg~~~li~A~~~l~~~~~~~--~l~l-i~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l----~~--~V~-f~g~~~ 326 (439)
T TIGR02472 257 PDRRKNIPSLVEAYGRSPKLQEMA--NLVL-VLGCRDDIRKMESQQREVLQKVLLLIDRYDL----YG--KVA-YPKHHR 326 (439)
T ss_pred CcccCCHHHHHHHHHhChhhhhhc--cEEE-EeCCccccccccHHHHHHHHHHHHHHHHcCC----Cc--eEE-ecCCCC
Confidence 999999999999998643221111 2322 3342 1111100 011223344555555431 11 355 457889
Q ss_pred HHHHHHHHHhc----ccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEEC
Q 004314 423 LSERAAYYTIA----ECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVN 495 (761)
Q Consensus 423 ~~el~aly~~A----Dv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~Vn 495 (761)
.+++.++|+.| |+||+||.+||||++++||||||. |+|+|..+|+.+.+. +|++|+
T Consensus 327 ~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~-----------------PvV~s~~gg~~eiv~~~~~G~lv~ 389 (439)
T TIGR02472 327 PDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGL-----------------PIVATDDGGPRDIIANCRNGLLVD 389 (439)
T ss_pred HHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCC-----------------CEEEeCCCCcHHHhcCCCcEEEeC
Confidence 99999999988 999999999999999999999986 999999999998884 489999
Q ss_pred CCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHh-hCCHHHHHHHHHHHH
Q 004314 496 PWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVS-THDVAYWARSFFQDM 544 (761)
Q Consensus 496 P~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~Wa~~~l~~l 544 (761)
|.|++++|++|.++++++ ++++.+.++.++++. .+++..-++++++-|
T Consensus 390 ~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 390 VLDLEAIASALEDALSDS-SQWQLWSRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred CCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 999999999999999865 466777777888775 578888888777654
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-23 Score=240.04 Aligned_cols=318 Identities=15% Similarity=0.148 Sum_probs=215.0
Q ss_pred hHHHHHHHHHHHHHHHHHH-hCCCCCEEEEeCCccchHHHHHHHhc------CCCeEEEEEecCC-----CchhHHhcCc
Q 004314 178 LWEAYVSANKIFSQRVIEV-INPEDDYVWIHDYHLMVLPTFLRRRF------TRLRMGFFLHSPF-----PSSEIYRTLP 245 (761)
Q Consensus 178 ~w~~Y~~vN~~fa~~i~~~-~~~~~DiVwvhDyhl~llp~~lr~~~------~~~~ig~flH~Pf-----P~~e~fr~lp 245 (761)
....|.-.++..++.+.+. ++| |+||+||+|..++|.+++++. .++|++++.|... |...+-..+|
T Consensus 120 ~~~rf~~f~~a~l~~~~~~~~~p--DiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~ 197 (489)
T PRK14098 120 SAEKVIFFNVGVLETLQRLGWKP--DIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLP 197 (489)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCC--CEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhCC
Confidence 4455665566665555432 244 899999999999999998764 4789999999852 2211111133
Q ss_pred ch------------HHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccc
Q 004314 246 VR------------EEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQI 313 (761)
Q Consensus 246 ~r------------~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f 313 (761)
+. .-+-.++..||.|..-++.|++...+....-.|++. . +..+..++.++|+|||++.|
T Consensus 198 ~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~-----~----l~~~~~kl~~I~NGID~~~~ 268 (489)
T PRK14098 198 EEVCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDK-----V----LEERKMRLHGILNGIDTRQW 268 (489)
T ss_pred HHhhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChHH-----H----HHhcCCCeeEEeCCcccccc
Confidence 21 112235678898888888888764320000011100 0 01134578899999999998
Q ss_pred hhhhccc-----------hHHHHHHHHHHHc-----CCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEE
Q 004314 314 ESVLRLA-----------DKDWRVQELKQQF-----EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQI 377 (761)
Q Consensus 314 ~~~~~~~-----------~~~~~~~~lr~~~-----~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi 377 (761)
.+..... ...+....+++++ +++++|++|+|+++.||+..+++|+.++++. + +.|+++
T Consensus 269 ~p~~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~--~----~~lviv 342 (489)
T PRK14098 269 NPSTDKLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVEL--D----IQLVIC 342 (489)
T ss_pred CCcccccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhc--C----cEEEEE
Confidence 7642110 0112234566655 2567999999999999999999999998752 3 458888
Q ss_pred ecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeec
Q 004314 378 ANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQ 457 (761)
Q Consensus 378 ~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~ 457 (761)
|. |+. .+++++++++++.. ..|.+. +.++.+++..+|+.||+||+||..||||++.+|||+||.
T Consensus 343 G~-----G~~--~~~~~l~~l~~~~~--------~~V~~~-g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G~ 406 (489)
T PRK14098 343 GS-----GDK--EYEKRFQDFAEEHP--------EQVSVQ-TEFTDAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSYGT 406 (489)
T ss_pred eC-----CCH--HHHHHHHHHHHHCC--------CCEEEE-EecCHHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhCCC
Confidence 73 322 34566677766532 136655 468899999999999999999999999999999999975
Q ss_pred CCCCCCCCCCCCCCCCceEEEcCCCCCccccc-------CcEEECCCCHHHHHHHHHHHHcC--CHHHHHHHHHHHhhHH
Q 004314 458 GVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-------GAIRVNPWNIEATAEAMHEAIQM--NEAEKQLRHEKHYRYV 528 (761)
Q Consensus 458 ~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-------~al~VnP~d~~~~A~ai~~aL~m--~~~er~~r~~~~~~~v 528 (761)
|+|++..+|+.+.+. +|++++|.|++++|++|.+++.+ .++.++.+.++. ..
T Consensus 407 -----------------ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~~--~~ 467 (489)
T PRK14098 407 -----------------IPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHDEERWEELVLEA--ME 467 (489)
T ss_pred -----------------CeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHH--hc
Confidence 788999999988772 48999999999999999998743 222222222211 23
Q ss_pred hhCCHHHHHHHHHHHHHHH
Q 004314 529 STHDVAYWARSFFQDMERT 547 (761)
Q Consensus 529 ~~~~~~~Wa~~~l~~l~~~ 547 (761)
+.+++..-++++++-.+++
T Consensus 468 ~~fsw~~~a~~y~~lY~~~ 486 (489)
T PRK14098 468 RDFSWKNSAEEYAQLYREL 486 (489)
T ss_pred CCCChHHHHHHHHHHHHHH
Confidence 5678888888887766554
|
|
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-23 Score=240.78 Aligned_cols=292 Identities=17% Similarity=0.233 Sum_probs=202.4
Q ss_pred CCEEEEeCCccchHHHHHHHhcC--CCeEEEEEecCCC----chhHHhcC--cch------------HH-HHHHhhhcCE
Q 004314 201 DDYVWIHDYHLMVLPTFLRRRFT--RLRMGFFLHSPFP----SSEIYRTL--PVR------------EE-ILKALLNADL 259 (761)
Q Consensus 201 ~DiVwvhDyhl~llp~~lr~~~~--~~~ig~flH~PfP----~~e~fr~l--p~r------------~~-il~~ll~~Dl 259 (761)
-|+||+||+|..++|.++++... ++|+.++.|...+ +.+.+..+ |+. -. +-.++..||.
T Consensus 129 ~DiiH~hdw~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ 208 (473)
T TIGR02095 129 PDVVHAHDWHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADR 208 (473)
T ss_pred CCEEEECCcHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCc
Confidence 38999999999999999988765 3899999998642 12222221 111 01 1234567777
Q ss_pred EeeeCHHHHHHHHHHHhhhcCceeeccCceeEEE--EcCeEEEEEEeccccCcccchhhhccc-----------hHHHHH
Q 004314 260 IGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLE--YYGRTVGIKIMPVGIHMGQIESVLRLA-----------DKDWRV 326 (761)
Q Consensus 260 igF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~--~~gr~~~i~v~P~GId~~~f~~~~~~~-----------~~~~~~ 326 (761)
|...+..|++..... ..|. +++ +..+..++.++|+|||.+.|.+..... ......
T Consensus 209 v~tVS~~~~~ei~~~---~~~~---------~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k 276 (473)
T TIGR02095 209 VTTVSPTYAREILTP---EFGY---------GLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENK 276 (473)
T ss_pred CeecCHhHHHHhcCC---cCCc---------cchhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhH
Confidence 777777776654321 0000 000 011335788999999999987532100 011223
Q ss_pred HHHHHHcC-----CCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHH
Q 004314 327 QELKQQFE-----GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKR 401 (761)
Q Consensus 327 ~~lr~~~~-----~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~ 401 (761)
..++++++ ++++|++|||+++.||+..+++|++++.++. +.|+++|. |+ .++++++++++.+
T Consensus 277 ~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G~-----g~--~~~~~~l~~~~~~ 343 (473)
T TIGR02095 277 EALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELG------GQLVVLGT-----GD--PELEEALRELAER 343 (473)
T ss_pred HHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHcC------cEEEEECC-----CC--HHHHHHHHHHHHH
Confidence 45677762 6789999999999999999999999987542 44887773 22 2355667777654
Q ss_pred HhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCC
Q 004314 402 INETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEF 481 (761)
Q Consensus 402 in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~ 481 (761)
.+. .+.++. ..+.+++..+|+.||++++||..||||++.+|||+||. |+|+|..
T Consensus 344 ~~~--------~v~~~~-~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~-----------------pvI~s~~ 397 (473)
T TIGR02095 344 YPG--------NVRVII-GYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRYGT-----------------VPIVRRT 397 (473)
T ss_pred CCC--------cEEEEE-cCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCCC-----------------CeEEccC
Confidence 321 355554 56788899999999999999999999999999999976 8999999
Q ss_pred CCCccccc---------CcEEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHhhHHhhCCHHHHHHHHHHHHH
Q 004314 482 IGCSPSLS---------GAIRVNPWNIEATAEAMHEAIQM---NEAEKQLRHEKHYRYVSTHDVAYWARSFFQDME 545 (761)
Q Consensus 482 ~G~~~~l~---------~al~VnP~d~~~~A~ai~~aL~m---~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l~ 545 (761)
+|..+.+. +|++++|.|++++|++|.++|.+ .++.++.+.++.. .+.+++..-++++++-.+
T Consensus 398 gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~Y~ 471 (473)
T TIGR02095 398 GGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNAM--SQDFSWDKSAKQYVELYR 471 (473)
T ss_pred CCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCCcHHHHHHHHHHHH
Confidence 99999883 38999999999999999999873 2223333333322 256888888888776544
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.6e-23 Score=235.33 Aligned_cols=294 Identities=18% Similarity=0.180 Sum_probs=194.0
Q ss_pred CEEEEeCCccchHHHHHHHh-cCCCeEEEEEecC-----CCchhHHhc--CcchH-------------HHHHHhhhcCEE
Q 004314 202 DYVWIHDYHLMVLPTFLRRR-FTRLRMGFFLHSP-----FPSSEIYRT--LPVRE-------------EILKALLNADLI 260 (761)
Q Consensus 202 DiVwvhDyhl~llp~~lr~~-~~~~~ig~flH~P-----fP~~e~fr~--lp~r~-------------~il~~ll~~Dli 260 (761)
||||+||+|..++|.+++.+ ..+++++++.|.. ||. ..+.. +|... -+-.++..||.|
T Consensus 135 DIiH~Hdw~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad~v 213 (485)
T PRK14099 135 DIVHAHDWQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPR-ELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLADRI 213 (485)
T ss_pred CEEEECCcHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCH-HHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcCee
Confidence 89999999999999998753 2467899999974 332 11111 11100 123345667777
Q ss_pred eeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccc-----------hHHHHHHHH
Q 004314 261 GFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLA-----------DKDWRVQEL 329 (761)
Q Consensus 261 gF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~-----------~~~~~~~~l 329 (761)
.--+..+++...+.- .-.|++. . +..+..++.++|+|||++.|.+..... ........+
T Consensus 214 itVS~~~a~ei~~~~-~g~gl~~-----~----l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l 283 (485)
T PRK14099 214 TTVSPTYALEIQGPE-AGMGLDG-----L----LRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAAL 283 (485)
T ss_pred eecChhHHHHHhccc-CCcChHH-----H----HHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHH
Confidence 766766665543200 0001000 0 011235788999999999987642100 001123456
Q ss_pred HHHcC-----CCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhc
Q 004314 330 KQQFE-----GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINE 404 (761)
Q Consensus 330 r~~~~-----~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~ 404 (761)
+++++ +.+++++|+|+++.||+..+++|+.+++++ + +.|+++|. |+ .++++++++++.+..
T Consensus 284 ~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~--~----~~lvivG~-----G~--~~~~~~l~~l~~~~~- 349 (485)
T PRK14099 284 QARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGE--G----AQLALLGS-----GD--AELEARFRAAAQAYP- 349 (485)
T ss_pred HHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHhc--C----cEEEEEec-----CC--HHHHHHHHHHHHHCC-
Confidence 67662 356788899999999999999999998753 2 44887773 22 234556666665432
Q ss_pred ccCCCCCccEEEEcCCCCHHHHHHHH-HhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCC
Q 004314 405 TFGRPGYEPVVFIDKPVTLSERAAYY-TIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIG 483 (761)
Q Consensus 405 ~~g~~~~~pV~~~~~~v~~~el~aly-~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G 483 (761)
..++++.+. .+++..+| +.||+||+||.+||||++.+|||+||. |+|+|..+|
T Consensus 350 -------~~v~~~~G~--~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~-----------------ppVvs~~GG 403 (485)
T PRK14099 350 -------GQIGVVIGY--DEALAHLIQAGADALLVPSRFEPCGLTQLCALRYGA-----------------VPVVARVGG 403 (485)
T ss_pred -------CCEEEEeCC--CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCC-----------------CcEEeCCCC
Confidence 135444454 67888877 569999999999999999999999975 677799999
Q ss_pred Cccccc------------CcEEECCCCHHHHHHHHHHHHc--CCHHHHHHHHHHHhhHHhhCCHHHHHHHHHHHHHHHH
Q 004314 484 CSPSLS------------GAIRVNPWNIEATAEAMHEAIQ--MNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERTC 548 (761)
Q Consensus 484 ~~~~l~------------~al~VnP~d~~~~A~ai~~aL~--m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l~~~~ 548 (761)
..+.+. .|++|+|.|++++|++|.+++. ..++.++...++.+ .+.+++..-++++++-.+++.
T Consensus 404 l~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~~d~~~~~~l~~~~~--~~~fSw~~~a~~y~~lY~~l~ 480 (485)
T PRK14099 404 LADTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALFADPVAWRRLQRNGM--TTDVSWRNPAQHYAALYRSLV 480 (485)
T ss_pred ccceeecccccccccCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHhh--hhcCChHHHHHHHHHHHHHHH
Confidence 888762 3899999999999999998542 12233333333332 367888888888877766654
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.4e-24 Score=230.70 Aligned_cols=168 Identities=23% Similarity=0.275 Sum_probs=136.3
Q ss_pred HHHhccceeEEecCCCcCCCCCC--CCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCCCceEEccCCeEE
Q 004314 585 AYLRSKSRAILFDYDGTVMPQTS--INKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFM 662 (761)
Q Consensus 585 ~y~~s~~rlI~lDyDGTL~~~~~--~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~~l~liaehGa~i 662 (761)
++.+.++++||+||||||+|+.+ ..+.++++++++|++|++ +..|+|+|||++..+.++++ +.+++++|+||+++
T Consensus 105 ~~~~~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~~~-l~~l~l~g~hGa~i 181 (366)
T PLN03017 105 EASRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLAK--CFPTAIVTGRCIDKVYNFVK-LAELYYAGSHGMDI 181 (366)
T ss_pred HHhcCCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHhc--CCcEEEEeCCCHHHHHHhhc-ccCceEEEcCCcEE
Confidence 34556789999999999998774 345799999999999994 68899999999999999975 46799999999999
Q ss_pred eecCCcceee-------cCcCcCcchHHHHHHH---HHHHhcCCCccEEEecCceEEEEcccCCCCCchHHHHHHHHHHH
Q 004314 663 RWSADEEWQN-------CGQSVDFGWIQIAEPV---MKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLE 732 (761)
Q Consensus 663 r~~~~~~w~~-------~~~~~~~~w~~~v~~i---m~~y~~~t~Gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~ 732 (761)
+.+++ .|.. ........|+..+.++ ++.+++++||++||+|+++++||||+++++ .+.++..++.
T Consensus 182 ~~p~~-~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~----~~~~l~~~~~ 256 (366)
T PLN03017 182 KGPAK-GFSRHKRVKQSLLYQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEK----KWSELVLQVR 256 (366)
T ss_pred ecCCC-cceeccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHH----HHHHHHHHHH
Confidence 97643 3321 0012234587777766 556778999999999999999999999764 3467788888
Q ss_pred HHhcCCC-cEEEeCCeEEEEEeC-CCCcCC
Q 004314 733 SVLANEP-AAVKSGQFIVEVKPQ-VYIQLR 760 (761)
Q Consensus 733 ~~l~~~~-v~V~~G~~~vEV~p~-gvnKG~ 760 (761)
..+.+.+ +.+..|++++||+|. ++|||+
T Consensus 257 ~vl~~~~~l~v~~GkkVlEvRP~~~~dKG~ 286 (366)
T PLN03017 257 SVLKNFPTLKLTQGRKVFEIRPMIEWDKGK 286 (366)
T ss_pred HHHHhCCCcEEeCCCeEEEecCCCCCCHHH
Confidence 8887776 899999999999995 999996
|
|
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.8e-22 Score=225.89 Aligned_cols=287 Identities=16% Similarity=0.154 Sum_probs=209.7
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhc---Ccc--hHHHHH--HhhhcCEEeeeCHHHHHHHHH
Q 004314 201 DDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRT---LPV--REEILK--ALLNADLIGFHTFDYARHFLS 273 (761)
Q Consensus 201 ~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~---lp~--r~~il~--~ll~~DligF~t~~~~~~Fl~ 273 (761)
.|+|++|++....++.++++. .++|+++++|..++-...+.. .|. ...+++ .+..+|.+.+.+...++.+..
T Consensus 102 ~Diih~h~~~~~~~~~~~~~~-~~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~ 180 (405)
T TIGR03449 102 YDLIHSHYWLSGQVGWLLRDR-WGVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEARDLVR 180 (405)
T ss_pred CCeEEechHHHHHHHHHHHHh-cCCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHHHHHHH
Confidence 489999997666666666554 468899999975431111110 111 112221 345789999999988877653
Q ss_pred HHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc---CCCeEEEeecCccccCC
Q 004314 274 CCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIFKG 350 (761)
Q Consensus 274 ~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KG 350 (761)
. .+. ...++.++|+|||.+.|.+.. ....+.++ .++++|+++||+.+.||
T Consensus 181 ~----~~~---------------~~~ki~vi~ngvd~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~G~l~~~K~ 233 (405)
T TIGR03449 181 H----YDA---------------DPDRIDVVAPGADLERFRPGD--------RATERARLGLPLDTKVVAFVGRIQPLKA 233 (405)
T ss_pred H----cCC---------------ChhhEEEECCCcCHHHcCCCc--------HHHHHHhcCCCCCCcEEEEecCCCcccC
Confidence 1 121 224678899999998886421 11234444 36789999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCc-hhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHH
Q 004314 351 VDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRG-KDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAY 429 (761)
Q Consensus 351 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~-~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~al 429 (761)
+..+++|++++++++|+ .++.|+++|.+.. ++ +.. +++++++++.+.. ..|.| .+.++.+++..+
T Consensus 234 ~~~li~a~~~l~~~~~~--~~~~l~ivG~~~~-~g~~~~----~~l~~~~~~~~l~------~~v~~-~g~~~~~~~~~~ 299 (405)
T TIGR03449 234 PDVLLRAVAELLDRDPD--RNLRVIVVGGPSG-SGLATP----DALIELAAELGIA------DRVRF-LPPRPPEELVHV 299 (405)
T ss_pred HHHHHHHHHHHHhhCCC--cceEEEEEeCCCC-CcchHH----HHHHHHHHHcCCC------ceEEE-CCCCCHHHHHHH
Confidence 99999999999998887 2467888886532 23 222 3455555554421 13554 568999999999
Q ss_pred HHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCHHHHHHHH
Q 004314 430 YTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAM 506 (761)
Q Consensus 430 y~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai 506 (761)
|+.||++++||..||||++++|||+||. |+|+|..+|..+.+. .|++++|.|++++|++|
T Consensus 300 l~~ad~~v~ps~~E~~g~~~lEAma~G~-----------------Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i 362 (405)
T TIGR03449 300 YRAADVVAVPSYNESFGLVAMEAQACGT-----------------PVVAARVGGLPVAVADGETGLLVDGHDPADWADAL 362 (405)
T ss_pred HHhCCEEEECCCCCCcChHHHHHHHcCC-----------------CEEEecCCCcHhhhccCCceEECCCCCHHHHHHHH
Confidence 9999999999999999999999999976 999999999888773 38999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHHHHHHH
Q 004314 507 HEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERT 547 (761)
Q Consensus 507 ~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l~~~ 547 (761)
.++++.+ +++..+.++.++++..+++...++++++-+.++
T Consensus 363 ~~~l~~~-~~~~~~~~~~~~~~~~fsw~~~~~~~~~~y~~~ 402 (405)
T TIGR03449 363 ARLLDDP-RTRIRMGAAAVEHAAGFSWAATADGLLSSYRDA 402 (405)
T ss_pred HHHHhCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 9999864 355566666778888899999999888776653
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.1e-23 Score=228.17 Aligned_cols=284 Identities=16% Similarity=0.186 Sum_probs=196.4
Q ss_pred hCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCc--hhH-Hh-cCcc--------hHH---HHHHhhhcCEEe
Q 004314 197 INPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPS--SEI-YR-TLPV--------REE---ILKALLNADLIG 261 (761)
Q Consensus 197 ~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~--~e~-fr-~lp~--------r~~---il~~ll~~Dlig 261 (761)
++| |+|+.| +.+....++++.+|++++..+.|..+-. .+. |. ..+. +.. ....+-.+|.+.
T Consensus 86 ~~p--dvi~~h--~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi 161 (396)
T cd03818 86 FRP--DVIVAH--PGWGETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLRNRNALILLALAQADAGV 161 (396)
T ss_pred CCC--CEEEEC--CccchhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHHHhhhHhHHHHHhCCEEE
Confidence 445 899999 4556667899999999988776643311 110 10 0111 111 234466778877
Q ss_pred eeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc---CCCeE
Q 004314 262 FHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTV 338 (761)
Q Consensus 262 F~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~v 338 (761)
..+....+.|.+ ... .++.++|+|||.+.|.+... . ...++... .++++
T Consensus 162 ~~s~~~~~~~~~--------------------~~~--~ki~vI~ngvd~~~f~~~~~---~---~~~~~~~~~~~~~~~~ 213 (396)
T cd03818 162 SPTRWQRSTFPA--------------------ELR--SRISVIHDGIDTDRLRPDPQ---A---RLRLPNGRVLTPGDEV 213 (396)
T ss_pred CCCHHHHhhCcH--------------------hhc--cceEEeCCCccccccCCCch---h---hhcccccccCCCCCeE
Confidence 766644433321 011 36789999999999875321 1 11122111 46789
Q ss_pred EEeecC-ccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchh---HHHHHHHHHHHHHHHhcccCCCCCccE
Q 004314 339 LLGVDD-MDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKD---LEEIQAEIHATCKRINETFGRPGYEPV 414 (761)
Q Consensus 339 il~VdR-ld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~---~~~l~~ev~~lv~~in~~~g~~~~~pV 414 (761)
|++++| +.+.||+..+++|+.++.+++|+++ |++||......+.. ..+++ +++.++++.+.+ ...|
T Consensus 214 i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~----lvivG~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~---~~~V 283 (396)
T cd03818 214 ITFVARNLEPYRGFHVFMRALPRLLRARPDAR----VVIVGGDGVSYGAPPPDGESWK---QHMLDELGGRLD---LSRV 283 (396)
T ss_pred EEEECCCcccccCHHHHHHHHHHHHHHCCCcE----EEEEcCCCcccCCCCCCcccHH---HHHHHHhhcccC---cceE
Confidence 999998 9999999999999999998888876 88888532111110 01111 122333332221 1246
Q ss_pred EEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---Cc
Q 004314 415 VFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GA 491 (761)
Q Consensus 415 ~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~a 491 (761)
+|+ |.++.+++.++|+.||++++||..||+|++++||||||. |+|+|+.+|..+.+. .|
T Consensus 284 ~f~-G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~-----------------PVIas~~~g~~e~i~~~~~G 345 (396)
T cd03818 284 HFL-GRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGC-----------------LVVGSDTAPVREVITDGENG 345 (396)
T ss_pred EEe-CCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCC-----------------CEEEcCCCCchhhcccCCce
Confidence 654 689999999999999999999999999999999999986 999999999888884 48
Q ss_pred EEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhh-CCHHHHHHHHH
Q 004314 492 IRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVST-HDVAYWARSFF 541 (761)
Q Consensus 492 l~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~Wa~~~l 541 (761)
++|+|.|++++|++|.++++++ +++..+.++.++++.+ +++..-+++++
T Consensus 346 ~lv~~~d~~~la~~i~~ll~~~-~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 346 LLVDFFDPDALAAAVIELLDDP-ARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred EEcCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 9999999999999999999876 4666677778888877 77666666554
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.5e-22 Score=225.62 Aligned_cols=275 Identities=15% Similarity=0.104 Sum_probs=200.2
Q ss_pred CCEEEEeCCccchHHHHHHHh-cCCCeEEEEEecCCCc-hhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHHHhhh
Q 004314 201 DDYVWIHDYHLMVLPTFLRRR-FTRLRMGFFLHSPFPS-SEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRM 278 (761)
Q Consensus 201 ~DiVwvhDyhl~llp~~lr~~-~~~~~ig~flH~PfP~-~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~~r~ 278 (761)
-|+|+.|..+.-.+..++++. ....++.+++|.+-.. ..+.. ..+..+-+.+-.+|.|...+....+.+.+
T Consensus 119 ~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~~~~--~~~~~~~~~~~~ad~vv~~S~~~~~~l~~----- 191 (406)
T PRK15427 119 ADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSREVLN--HYTPEYQQLFRRGDLMLPISDLWAGRLQK----- 191 (406)
T ss_pred CCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccchhhh--hhhHHHHHHHHhCCEEEECCHHHHHHHHH-----
Confidence 489999988776666777663 2244667788965221 11110 01112223345789988777655444321
Q ss_pred cCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHHHHH
Q 004314 279 LGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAM 358 (761)
Q Consensus 279 lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~ 358 (761)
+|. ...+|.++|+|||.+.|.+... ....+...|++|||+.+.||+..+++|+
T Consensus 192 ~g~---------------~~~ki~vi~nGvd~~~f~~~~~------------~~~~~~~~il~vGrl~~~Kg~~~ll~a~ 244 (406)
T PRK15427 192 MGC---------------PPEKIAVSRMGVDMTRFSPRPV------------KAPATPLEIISVARLTEKKGLHVAIEAC 244 (406)
T ss_pred cCC---------------CHHHEEEcCCCCCHHHcCCCcc------------ccCCCCeEEEEEeCcchhcCHHHHHHHH
Confidence 121 1236778999999998864211 0123456799999999999999999999
Q ss_pred HHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhccccee
Q 004314 359 EHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVV 438 (761)
Q Consensus 359 ~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv 438 (761)
.++.+++|+++ |+++| +|+.. +++++++++.+. ...+.+.|.++.+++..+|+.||+||+
T Consensus 245 ~~l~~~~~~~~----l~ivG-----~G~~~----~~l~~~~~~~~l-------~~~V~~~G~~~~~el~~~l~~aDv~v~ 304 (406)
T PRK15427 245 RQLKEQGVAFR----YRILG-----IGPWE----RRLRTLIEQYQL-------EDVVEMPGFKPSHEVKAMLDDADVFLL 304 (406)
T ss_pred HHHHhhCCCEE----EEEEE-----CchhH----HHHHHHHHHcCC-------CCeEEEeCCCCHHHHHHHHHhCCEEEE
Confidence 99988888765 88887 34433 445555555431 233445679999999999999999999
Q ss_pred cccc------cCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCHHHHHHHHHHH
Q 004314 439 TAVR------DGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEA 509 (761)
Q Consensus 439 tS~~------EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~a 509 (761)
||.. ||++++.+||||||. |+|+|..+|+.+.+. +|++|+|.|++++|++|.++
T Consensus 305 pS~~~~~g~~Eg~p~~llEAma~G~-----------------PVI~t~~~g~~E~v~~~~~G~lv~~~d~~~la~ai~~l 367 (406)
T PRK15427 305 PSVTGADGDMEGIPVALMEAMAVGI-----------------PVVSTLHSGIPELVEADKSGWLVPENDAQALAQRLAAF 367 (406)
T ss_pred CCccCCCCCccCccHHHHHHHhCCC-----------------CEEEeCCCCchhhhcCCCceEEeCCCCHHHHHHHHHHH
Confidence 9984 999999999999986 999999999988883 48999999999999999999
Q ss_pred HcCCHHHHHHHHHHHhhHHh-hCCHHHHHHHHHHHHHH
Q 004314 510 IQMNEAEKQLRHEKHYRYVS-THDVAYWARSFFQDMER 546 (761)
Q Consensus 510 L~m~~~er~~r~~~~~~~v~-~~~~~~Wa~~~l~~l~~ 546 (761)
+++.+++++.+.++.++++. ++++...++++.+-+++
T Consensus 368 ~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 368 SQLDTDELAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred HhCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 99666677778888888875 58999888888776653
|
|
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-21 Score=230.56 Aligned_cols=337 Identities=12% Similarity=0.168 Sum_probs=210.5
Q ss_pred HhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCC----CchhH-HhcC------c
Q 004314 177 SLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPF----PSSEI-YRTL------P 245 (761)
Q Consensus 177 ~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~Pf----P~~e~-fr~l------p 245 (761)
+.|....+++...++.+.......-|+|+.|.+.--+++..++++. +++..++.|..= +.+.. +... .
T Consensus 362 ~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~l-gVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~ 440 (784)
T TIGR02470 362 EIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKL-GVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFS 440 (784)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhc-CCCEEEECCcchhhcccccccccccchhHHHhh
Confidence 4566666655556655554433223899999887778888887765 688888888541 11110 0001 0
Q ss_pred ch-HHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcCceee-ccCcee----EEEEcCeEEEEEEeccccCcccchhhhcc
Q 004314 246 VR-EEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQ-SKRGYI----GLEYYGRTVGIKIMPVGIHMGQIESVLRL 319 (761)
Q Consensus 246 ~r-~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~-~~~g~~----~~~~~gr~~~i~v~P~GId~~~f~~~~~~ 319 (761)
.+ ..-+..|-.||.|.-.|++-...-...+.. .+.... +..+.. ++++. ..++.++|+|+|++.|.+....
T Consensus 441 ~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~q-Y~s~~~ft~p~Ly~vvnGid~~--~~Ki~VVpPGVD~~iF~P~~~~ 517 (784)
T TIGR02470 441 CQFTADLIAMNAADFIITSTYQEIAGTKDSVGQ-YESHQAFTMPGLYRVVHGIDVF--DPKFNIVSPGADESIYFPYSDK 517 (784)
T ss_pred hhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhh-hhhcccccccceeeeecCccCC--cCCeEEECCCcChhhcCCCCch
Confidence 01 001245677999998886543211111100 000000 000111 11111 2378899999999999764321
Q ss_pred chHH-HHH----------HHHHHHc-----CCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCC
Q 004314 320 ADKD-WRV----------QELKQQF-----EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARG 383 (761)
Q Consensus 320 ~~~~-~~~----------~~lr~~~-----~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~ 383 (761)
.... ... ...++.+ +++++|++|+|+++.||+..+++||.++.+..+ .+.||+||++...
T Consensus 518 ~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~----~~~LVIVGGg~~~ 593 (784)
T TIGR02470 518 EKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRE----LVNLVVVAGKLDA 593 (784)
T ss_pred hhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCC----CeEEEEEeCCccc
Confidence 1000 000 0112332 478899999999999999999999987644333 3558888864321
Q ss_pred ---CchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHH-h---cccceecccccCCCcchhhheeee
Q 004314 384 ---RGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYT-I---AECVVVTAVRDGMNLTPYEYIVCR 456 (761)
Q Consensus 384 ---~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~-~---ADv~vvtS~~EGmnLv~~Eama~~ 456 (761)
...+..+..+++.+++++.+. . ..|.|++...+..+...+|+ + +||||+||.+||||||++||||||
T Consensus 594 ~~s~d~ee~~~i~~L~~la~~~gL----~--g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcG 667 (784)
T TIGR02470 594 KESKDREEQAEIEKMHNLIDQYQL----H--GQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCG 667 (784)
T ss_pred ccccchhHHHHHHHHHHHHHHhCC----C--CeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcC
Confidence 111122233556666666442 1 24776653346666667775 2 469999999999999999999998
Q ss_pred cCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHhhHH-h
Q 004314 457 QGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAIQ---MNEAEKQLRHEKHYRYV-S 529 (761)
Q Consensus 457 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~---m~~~er~~r~~~~~~~v-~ 529 (761)
. |+|+|..+|+.+.+. +|++|+|.|++++|++|.++++ ..++.++...++.+++| +
T Consensus 668 l-----------------PVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~ 730 (784)
T TIGR02470 668 L-----------------PTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYE 730 (784)
T ss_pred C-----------------CEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 6 999999999999883 4999999999999999999874 23445555566677777 5
Q ss_pred hCCHHHHHHHHHHHH
Q 004314 530 THDVAYWARSFFQDM 544 (761)
Q Consensus 530 ~~~~~~Wa~~~l~~l 544 (761)
.++|...+++++..+
T Consensus 731 ~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 731 KYTWKIYSERLLTLA 745 (784)
T ss_pred hCCHHHHHHHHHHHH
Confidence 688888888877654
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.8e-22 Score=226.56 Aligned_cols=283 Identities=15% Similarity=0.188 Sum_probs=199.9
Q ss_pred HHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcch-H---HHHHHh-hhcCEEeeeCHHHH
Q 004314 194 IEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVR-E---EILKAL-LNADLIGFHTFDYA 268 (761)
Q Consensus 194 ~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r-~---~il~~l-l~~DligF~t~~~~ 268 (761)
++..+| |+||+|+...+.++.++-.+..++|+.+.+|.-+|..--....++. + .+.+.+ ..+|.|...+....
T Consensus 140 i~~~kp--DiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ad~ii~~S~~~~ 217 (465)
T PLN02871 140 VARFKP--DLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLTLVTSPALG 217 (465)
T ss_pred HHhCCC--CEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchhhhhcccchhhHHHHHHHHHHHHhhCCEEEECCHHHH
Confidence 333455 8999998766655554433345788888888765432110011110 0 112222 35788888887766
Q ss_pred HHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc----CCCeEEEeecC
Q 004314 269 RHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF----EGKTVLLGVDD 344 (761)
Q Consensus 269 ~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~----~~~~vil~VdR 344 (761)
+.|.. .+. ....++.++|+|||.+.|.+.... ..+++++ +++++|+++||
T Consensus 218 ~~l~~-----~~~--------------~~~~kv~vi~nGvd~~~f~p~~~~-------~~~~~~~~~~~~~~~~i~~vGr 271 (465)
T PLN02871 218 KELEA-----AGV--------------TAANRIRVWNKGVDSESFHPRFRS-------EEMRARLSGGEPEKPLIVYVGR 271 (465)
T ss_pred HHHHH-----cCC--------------CCcCeEEEeCCccCccccCCcccc-------HHHHHHhcCCCCCCeEEEEeCC
Confidence 66542 111 012367889999999998753221 1233333 46789999999
Q ss_pred ccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHH
Q 004314 345 MDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLS 424 (761)
Q Consensus 345 ld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~ 424 (761)
+.+.||+..+++|++++ |+++ |+++| +|+.. ++++++++.. +|+|+ |.++.+
T Consensus 272 l~~~K~~~~li~a~~~~----~~~~----l~ivG-----~G~~~----~~l~~~~~~~----------~V~f~-G~v~~~ 323 (465)
T PLN02871 272 LGAEKNLDFLKRVMERL----PGAR----LAFVG-----DGPYR----EELEKMFAGT----------PTVFT-GMLQGD 323 (465)
T ss_pred CchhhhHHHHHHHHHhC----CCcE----EEEEe-----CChHH----HHHHHHhccC----------CeEEe-ccCCHH
Confidence 99999999999888653 5544 88887 34433 3444444321 46654 689999
Q ss_pred HHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc------CcEEECCCC
Q 004314 425 ERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS------GAIRVNPWN 498 (761)
Q Consensus 425 el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~------~al~VnP~d 498 (761)
++..+|+.||++|+||..||||++++||||||. |+|+|..+|+.+.+. +|++++|.|
T Consensus 324 ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~G~-----------------PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d 386 (465)
T PLN02871 324 ELSQAYASGDVFVMPSESETLGFVVLEAMASGV-----------------PVVAARAGGIPDIIPPDQEGKTGFLYTPGD 386 (465)
T ss_pred HHHHHHHHCCEEEECCcccccCcHHHHHHHcCC-----------------CEEEcCCCCcHhhhhcCCCCCceEEeCCCC
Confidence 999999999999999999999999999999986 999999999888773 389999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHHH-HHHHHHh
Q 004314 499 IEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQD-MERTCKD 550 (761)
Q Consensus 499 ~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~-l~~~~~~ 550 (761)
++++|++|.++++.+ +.++.+.++.++++.++++...++++++. -.++...
T Consensus 387 ~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~~ 438 (465)
T PLN02871 387 VDDCVEKLETLLADP-ELRERMGAAAREEVEKWDWRAATRKLRNEQYSAAIWF 438 (465)
T ss_pred HHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999854 45666677788889999999999999874 4444433
|
|
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.5e-22 Score=222.09 Aligned_cols=278 Identities=14% Similarity=0.142 Sum_probs=197.3
Q ss_pred hCCCCCEEEEeCCccchH-HHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHH-hhhcCEEeeeCHHHHHHHHHH
Q 004314 197 INPEDDYVWIHDYHLMVL-PTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKA-LLNADLIGFHTFDYARHFLSC 274 (761)
Q Consensus 197 ~~~~~DiVwvhDyhl~ll-p~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~-ll~~DligF~t~~~~~~Fl~~ 274 (761)
.+| |+|++|+++.... ...+-.+..++|++++.|..|+..+... .+...+.+. +-.+|.+.+.+....+.+...
T Consensus 87 ~~~--DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~h~~~~~~~~~~--~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~ 162 (398)
T cd03796 87 ERI--TIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLFGFADASS--IHTNKLLRFSLADVDHVICVSHTSKENTVLR 162 (398)
T ss_pred cCC--CEEEECCCCchHHHHHHHHhhhcCCcEEEEecccccccchhh--HHhhHHHHHhhccCCEEEEecHhHhhHHHHH
Confidence 355 8999999875533 2333334456899999998775332211 111222232 346888888887666554321
Q ss_pred HhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHH
Q 004314 275 CSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLK 354 (761)
Q Consensus 275 ~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~ 354 (761)
.+ ....++.++|+|+|.+.|.+... . ..+++++++++||+++.||+..+
T Consensus 163 ----~~---------------~~~~k~~vi~ngvd~~~f~~~~~-----~-------~~~~~~~i~~~grl~~~Kg~~~l 211 (398)
T cd03796 163 ----AS---------------LDPERVSVIPNAVDSSDFTPDPS-----K-------RDNDKITIVVISRLVYRKGIDLL 211 (398)
T ss_pred ----hC---------------CChhhEEEEcCccCHHHcCCCcc-----c-------CCCCceEEEEEeccchhcCHHHH
Confidence 01 12246788999999988864211 0 12567899999999999999999
Q ss_pred HHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcc
Q 004314 355 LLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAE 434 (761)
Q Consensus 355 l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~AD 434 (761)
++|+..+.+++|+++ |+++|. ++.. +++++++++.+. . ..|.++ |.++.+++.++|+.||
T Consensus 212 i~a~~~l~~~~~~~~----l~i~G~-----g~~~----~~l~~~~~~~~l----~--~~v~~~-G~~~~~~~~~~l~~ad 271 (398)
T cd03796 212 VGIIPEICKKHPNVR----FIIGGD-----GPKR----ILLEEMREKYNL----Q--DRVELL-GAVPHERVRDVLVQGH 271 (398)
T ss_pred HHHHHHHHhhCCCEE----EEEEeC-----CchH----HHHHHHHHHhCC----C--CeEEEe-CCCCHHHHHHHHHhCC
Confidence 999999988888765 887773 3433 334455554331 1 136654 6899999999999999
Q ss_pred cceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc-C-cEEECCCCHHHHHHHHHHHHcC
Q 004314 435 CVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-G-AIRVNPWNIEATAEAMHEAIQM 512 (761)
Q Consensus 435 v~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~-al~VnP~d~~~~A~ai~~aL~m 512 (761)
++++||..||||++.+||||||. |+|+|..+|..+.+. + +++++| |+++++++|.+++.+
T Consensus 272 ~~v~pS~~E~~g~~~~EAma~G~-----------------PVI~s~~gg~~e~i~~~~~~~~~~-~~~~l~~~l~~~l~~ 333 (398)
T cd03796 272 IFLNTSLTEAFCIAIVEAASCGL-----------------LVVSTRVGGIPEVLPPDMILLAEP-DVESIVRKLEEAISI 333 (398)
T ss_pred EEEeCChhhccCHHHHHHHHcCC-----------------CEEECCCCCchhheeCCceeecCC-CHHHHHHHHHHHHhC
Confidence 99999999999999999999986 899999999988884 4 445555 999999999999997
Q ss_pred CHHHHHHHHHHHhhHH-hhCCHHHHHHHHHHHHHHHH
Q 004314 513 NEAEKQLRHEKHYRYV-STHDVAYWARSFFQDMERTC 548 (761)
Q Consensus 513 ~~~er~~r~~~~~~~v-~~~~~~~Wa~~~l~~l~~~~ 548 (761)
+.+. ....++.++.+ ..+++..-++++++..+++.
T Consensus 334 ~~~~-~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~l~ 369 (398)
T cd03796 334 LRTG-KHDPWSFHNRVKKMYSWEDVAKRTEKVYDRIL 369 (398)
T ss_pred hhhh-hhHHHHHHHHHHhhCCHHHHHHHHHHHHHHHh
Confidence 6533 33445555554 55888888998888877754
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.4e-22 Score=225.60 Aligned_cols=310 Identities=16% Similarity=0.210 Sum_probs=206.6
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHHhc-----CCCeEEEEEecCCCch----hHHhcC--cc---
Q 004314 181 AYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRF-----TRLRMGFFLHSPFPSS----EIYRTL--PV--- 246 (761)
Q Consensus 181 ~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~-----~~~~ig~flH~PfP~~----e~fr~l--p~--- 246 (761)
.|.-.++...+.+.+. ...-|+||+||+|..++|.++++.+ .++|+.|+.|.+.+.. ..+..+ ++
T Consensus 111 ~~~~f~~~~~~~l~~~-~~~pDviH~hd~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~ 189 (476)
T cd03791 111 RFALFSRAALELLRRL-GWKPDIIHCHDWHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEEL 189 (476)
T ss_pred HHHHHHHHHHHHHHhc-CCCCcEEEECchHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccch
Confidence 3443444444433332 1223999999999999999998874 5789999999874321 111111 11
Q ss_pred ----------h-HHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEE--EcCeEEEEEEeccccCcccc
Q 004314 247 ----------R-EEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLE--YYGRTVGIKIMPVGIHMGQI 313 (761)
Q Consensus 247 ----------r-~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~--~~gr~~~i~v~P~GId~~~f 313 (761)
. .-+..++..||.|...+..+++..++.- .| . +++ ...+..++.++|+|||.+.|
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~---~~------~---gl~~~~~~~~~ki~~I~NGid~~~~ 257 (476)
T cd03791 190 FHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTPE---FG------E---GLDGLLRARAGKLSGILNGIDYDVW 257 (476)
T ss_pred hhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCCC---CC------c---chHHHHHhccCCeEEEeCCCcCccc
Confidence 0 1222345677877777777766553210 00 0 000 01123578899999999988
Q ss_pred hhhhccc-----------hHHHHHHHHHHHc-----CCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEE
Q 004314 314 ESVLRLA-----------DKDWRVQELKQQF-----EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQI 377 (761)
Q Consensus 314 ~~~~~~~-----------~~~~~~~~lr~~~-----~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi 377 (761)
.+..... ........+++++ +++++|+++||+.+.||+..+++|++++.+++ +.|+++
T Consensus 258 ~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~ 331 (476)
T cd03791 258 NPATDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELG------GQLVIL 331 (476)
T ss_pred CccccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHcC------cEEEEE
Confidence 7642210 0112334566666 46789999999999999999999999987643 447777
Q ss_pred ecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeec
Q 004314 378 ANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQ 457 (761)
Q Consensus 378 ~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~ 457 (761)
|. |+ .++++++.+++.+.. ..|+++.+ .+.+++..+|+.||++++||..||||++.+|||+||.
T Consensus 332 G~-----g~--~~~~~~~~~~~~~~~--------~~v~~~~~-~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~ 395 (476)
T cd03791 332 GS-----GD--PEYEEALRELAARYP--------GRVAVLIG-YDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRYGT 395 (476)
T ss_pred ec-----CC--HHHHHHHHHHHHhCC--------CcEEEEEe-CCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhCCC
Confidence 73 22 234456666655431 14666654 4577788999999999999999999999999999976
Q ss_pred CCCCCCCCCCCCCCCCceEEEcCCCCCcccc-c--------CcEEECCCCHHHHHHHHHHHHcCCH--HHHHHHHHHHhh
Q 004314 458 GVSGSESSSESSAPKKSMLVVSEFIGCSPSL-S--------GAIRVNPWNIEATAEAMHEAIQMNE--AEKQLRHEKHYR 526 (761)
Q Consensus 458 ~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--------~al~VnP~d~~~~A~ai~~aL~m~~--~er~~r~~~~~~ 526 (761)
|+|+|..+|..+.+ + +|++++|.|+++++++|.+++.+.. +++..+.++..+
T Consensus 396 -----------------pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~ 458 (476)
T cd03791 396 -----------------VPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQRNAMA 458 (476)
T ss_pred -----------------CCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc
Confidence 89999999999988 3 5999999999999999999986432 233333333222
Q ss_pred HHhhCCHHHHHHHHHHHH
Q 004314 527 YVSTHDVAYWARSFFQDM 544 (761)
Q Consensus 527 ~v~~~~~~~Wa~~~l~~l 544 (761)
..+++..-++++++-.
T Consensus 459 --~~fsw~~~a~~~~~~y 474 (476)
T cd03791 459 --QDFSWDRSAKEYLELY 474 (476)
T ss_pred --cCCChHHHHHHHHHHH
Confidence 3467777777766543
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.9e-21 Score=214.28 Aligned_cols=285 Identities=15% Similarity=0.119 Sum_probs=204.6
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHh-----cCcchHHH-HHHhhhcCEEeeeCHHHHHHHHHH
Q 004314 201 DDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYR-----TLPVREEI-LKALLNADLIGFHTFDYARHFLSC 274 (761)
Q Consensus 201 ~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr-----~lp~r~~i-l~~ll~~DligF~t~~~~~~Fl~~ 274 (761)
.|+||+|++...+.+.+++ +..++|+.+.+|..+|...... .......+ ...+..+|.|.+.+....+.+...
T Consensus 84 ~divh~~~~~~~~~~~~~~-~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~ 162 (388)
T TIGR02149 84 ADVVHSHTWYTFLAGHLAK-KLYDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGMREDILKY 162 (388)
T ss_pred CCeEeecchhhhhHHHHHH-HhcCCCEEEEeecccccccccccccccchhHHHHHHHHHHhhCCEEEEccHHHHHHHHHH
Confidence 4899999988766655554 4467899999998765321100 00011111 123456888888887766665431
Q ss_pred HhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc---CCCeEEEeecCccccCCh
Q 004314 275 CSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIFKGV 351 (761)
Q Consensus 275 ~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi 351 (761)
.-+. ...++.++|+|+|.+.+.+.. ...+++++ .++++|+++||+.+.||+
T Consensus 163 ---~~~~---------------~~~~i~vi~ng~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~Grl~~~Kg~ 216 (388)
T TIGR02149 163 ---YPDL---------------DPEKVHVIYNGIDTKEYKPDD--------GNVVLDRYGIDRSRPYILFVGRITRQKGV 216 (388)
T ss_pred ---cCCC---------------CcceEEEecCCCChhhcCCCc--------hHHHHHHhCCCCCceEEEEEcccccccCH
Confidence 0011 123678899999998876421 12234444 467799999999999999
Q ss_pred HHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHH
Q 004314 352 DLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYT 431 (761)
Q Consensus 352 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~ 431 (761)
..+++|++++. +++ .|+++|+ +++..++.+++++.+..++... ..|+++.+.++.+++..+|+
T Consensus 217 ~~li~a~~~l~---~~~----~l~i~g~-----g~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~ 279 (388)
T TIGR02149 217 PHLLDAVHYIP---KDV----QVVLCAG-----APDTPEVAEEVRQAVALLDRNR-----TGIIWINKMLPKEELVELLS 279 (388)
T ss_pred HHHHHHHHHHh---hcC----cEEEEeC-----CCCcHHHHHHHHHHHHHhcccc-----CceEEecCCCCHHHHHHHHH
Confidence 99999999873 333 3666653 2223345566666666554321 24788888999999999999
Q ss_pred hcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCH------HHH
Q 004314 432 IAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNI------EAT 502 (761)
Q Consensus 432 ~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~------~~~ 502 (761)
.||++|+||..||||++.+|||+||. |+|+|..+|..+.+. .|++++|.|. +++
T Consensus 280 ~aDv~v~ps~~e~~g~~~lEA~a~G~-----------------PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l 342 (388)
T TIGR02149 280 NAEVFVCPSIYEPLGIVNLEAMACGT-----------------PVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAEL 342 (388)
T ss_pred hCCEEEeCCccCCCChHHHHHHHcCC-----------------CEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHH
Confidence 99999999999999999999999976 999999999888773 4899999998 999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHhhHH-hhCCHHHHHHHHHHHHHHH
Q 004314 503 AEAMHEAIQMNEAEKQLRHEKHYRYV-STHDVAYWARSFFQDMERT 547 (761)
Q Consensus 503 A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~Wa~~~l~~l~~~ 547 (761)
+++|.++++.+ ++++.+.++.++++ +.+++..+++++++.++++
T Consensus 343 ~~~i~~l~~~~-~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~ 387 (388)
T TIGR02149 343 AKAINILLADP-ELAKKMGIAGRKRAEEEFSWGSIAKKTVEMYRKV 387 (388)
T ss_pred HHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhh
Confidence 99999999854 45666666677776 5689999999988777653
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.6e-21 Score=227.33 Aligned_cols=333 Identities=13% Similarity=0.152 Sum_probs=208.7
Q ss_pred hHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecC-----------CCch-hHHhc
Q 004314 176 RSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSP-----------FPSS-EIYRT 243 (761)
Q Consensus 176 ~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~P-----------fP~~-e~fr~ 243 (761)
.+.|.--.+++...++.+.......-|+|+-|.+.--+++..|+++. ++|.+++.|+- |... +-|+.
T Consensus 384 e~l~p~L~~f~~~~~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~~l-gVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~ 462 (815)
T PLN00142 384 FDVWPYLETFAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKKFDDKYHF 462 (815)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHh-CCCEEEEcccchhhhccccCCcccccchhhhh
Confidence 34676666666666666644333123899999777778888888775 68999999942 2111 11111
Q ss_pred C-cchHHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCc---------eeEEEEcCeEEEEEEeccccCcccc
Q 004314 244 L-PVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRG---------YIGLEYYGRTVGIKIMPVGIHMGQI 313 (761)
Q Consensus 244 l-p~r~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g---------~~~~~~~gr~~~i~v~P~GId~~~f 313 (761)
. ....|. ..|..||.|.-.|+.-....-..+ + .+++-.+ .-++++.. -++.++|+|+|.+.|
T Consensus 463 ~~r~~aE~-~a~~~Ad~IIasT~qEi~g~~~~i----~-qy~sh~~f~~p~L~rvv~GId~~~--~ki~VVppGvD~~~F 534 (815)
T PLN00142 463 SCQFTADL-IAMNHADFIITSTYQEIAGSKDTV----G-QYESHTAFTLPGLYRVVHGIDVFD--PKFNIVSPGADMSIY 534 (815)
T ss_pred hhchHHHH-HHHHhhhHHHhCcHHHHhcccchh----h-hhhcccccccchhhhhhccccccc--cCeeEECCCCChhhc
Confidence 0 011111 145567776655544332110000 0 0000000 00122222 278889999999988
Q ss_pred hhhhccch--------HHHHH---HHHHHHc-----CCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEE
Q 004314 314 ESVLRLAD--------KDWRV---QELKQQF-----EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQI 377 (761)
Q Consensus 314 ~~~~~~~~--------~~~~~---~~lr~~~-----~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi 377 (761)
.+...... ..+.. ...++.+ +++++|++|+|+++.||+..+++||.++.+..++ +.|++|
T Consensus 535 ~P~~~~~~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~----~~LVIV 610 (815)
T PLN00142 535 FPYTEKQKRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLREL----VNLVVV 610 (815)
T ss_pred CCCChHHhhHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCC----cEEEEE
Confidence 75321000 00000 0011112 3577999999999999999999999988666554 448888
Q ss_pred ecCC-CCCchhHHH--HHHHHHHHHHHHhcccCCCCCccEEEEcC---CCCHHHHHHHHH-hcccceecccccCCCcchh
Q 004314 378 ANPA-RGRGKDLEE--IQAEIHATCKRINETFGRPGYEPVVFIDK---PVTLSERAAYYT-IAECVVVTAVRDGMNLTPY 450 (761)
Q Consensus 378 ~~p~-r~~~~~~~~--l~~ev~~lv~~in~~~g~~~~~pV~~~~~---~v~~~el~aly~-~ADv~vvtS~~EGmnLv~~ 450 (761)
|+.. .....+.++ ..+++.+++++.+.. ..|.|++. ..+..++..+|+ ++|+||+||.+||||++++
T Consensus 611 Ggg~d~~~s~d~ee~~el~~L~~La~~lgL~------~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvL 684 (815)
T PLN00142 611 GGFIDPSKSKDREEIAEIKKMHSLIEKYNLK------GQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVV 684 (815)
T ss_pred ECCccccccccHHHHHHHHHHHHHHHHcCCC------CcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHH
Confidence 8641 111112111 224456666654421 24666542 455678888877 5799999999999999999
Q ss_pred hheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHH
Q 004314 451 EYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAIQ---MNEAEKQLRHEKH 524 (761)
Q Consensus 451 Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~---m~~~er~~r~~~~ 524 (761)
||||||. |+|+|..+|+.+.+. .|++|+|.|++++|++|..+|. ..++.++...++.
T Consensus 685 EAMA~Gl-----------------PVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~A 747 (815)
T PLN00142 685 EAMTCGL-----------------PTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKISDAG 747 (815)
T ss_pred HHHHcCC-----------------CEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 9999986 999999999999883 4999999999999999987763 3344556666667
Q ss_pred hhHH-hhCCHHHHHHHHHHHH
Q 004314 525 YRYV-STHDVAYWARSFFQDM 544 (761)
Q Consensus 525 ~~~v-~~~~~~~Wa~~~l~~l 544 (761)
++++ +.+++...++++++-.
T Consensus 748 r~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 748 LQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred HHHHHHhCCHHHHHHHHHHHH
Confidence 7877 5689888888877644
|
|
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.6e-21 Score=212.49 Aligned_cols=284 Identities=21% Similarity=0.223 Sum_probs=202.1
Q ss_pred CEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhH--Hhc---Ccc-hHHH-HHHhhhcCEEeeeCHHHHHHHHHH
Q 004314 202 DYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEI--YRT---LPV-REEI-LKALLNADLIGFHTFDYARHFLSC 274 (761)
Q Consensus 202 DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~--fr~---lp~-r~~i-l~~ll~~DligF~t~~~~~~Fl~~ 274 (761)
|+|++|++....++..+.+. .++++.++.|........ ... .+. +..+ ...+..+|.+.+.+......+...
T Consensus 103 Div~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~ 181 (398)
T cd03800 103 DLIHAHYWDSGLVALLLARR-LGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVIASTPQEAEELYSL 181 (398)
T ss_pred cEEEEecCccchHHHHHHhh-cCCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHH
Confidence 89999998877776666554 478899999976432110 000 000 1111 223457999999988776665431
Q ss_pred HhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHH
Q 004314 275 CSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLK 354 (761)
Q Consensus 275 ~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~ 354 (761)
.+ ....++.++|+|+|.+.|.+.... ......+. ...++++|+++||+++.||+..+
T Consensus 182 ----~~---------------~~~~~~~vi~ng~~~~~~~~~~~~---~~~~~~~~-~~~~~~~i~~~gr~~~~k~~~~l 238 (398)
T cd03800 182 ----YG---------------AYPRRIRVVPPGVDLERFTPYGRA---EARRARLL-RDPDKPRILAVGRLDPRKGIDTL 238 (398)
T ss_pred ----cc---------------ccccccEEECCCCCccceecccch---hhHHHhhc-cCCCCcEEEEEcccccccCHHHH
Confidence 11 112247889999999888653221 11111111 11467899999999999999999
Q ss_pred HHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcc
Q 004314 355 LLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAE 434 (761)
Q Consensus 355 l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~AD 434 (761)
++|+..+.+++|+++ |+++|+..... ......++++++++.+.. ..|. +.+.++.+++..+|+.||
T Consensus 239 l~a~~~l~~~~~~~~----l~i~G~~~~~~---~~~~~~~~~~~~~~~~~~------~~v~-~~g~~~~~~~~~~~~~ad 304 (398)
T cd03800 239 IRAYAELPELRERAN----LVIVGGPRDDI---LAMDEEELRELARELGVI------DRVD-FPGRVSREDLPALYRAAD 304 (398)
T ss_pred HHHHHHHHHhCCCeE----EEEEECCCCcc---hhhhhHHHHHHHHhcCCC------ceEE-EeccCCHHHHHHHHHhCC
Confidence 999999988877765 88888543221 122233455555554311 1355 457899999999999999
Q ss_pred cceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCHHHHHHHHHHHHc
Q 004314 435 CVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAIQ 511 (761)
Q Consensus 435 v~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~ 511 (761)
++++||..||+|++++|||+||. |+|+|+.+|..+.+. .|++++|.|+++++++|.++++
T Consensus 305 i~l~ps~~e~~~~~l~Ea~a~G~-----------------Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~ 367 (398)
T cd03800 305 VFVNPALYEPFGLTALEAMACGL-----------------PVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLT 367 (398)
T ss_pred EEEecccccccCcHHHHHHhcCC-----------------CEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHHh
Confidence 99999999999999999999986 899999999988883 4899999999999999999998
Q ss_pred CCHHHHHHHHHHHhhHH-hhCCHHHHHHHHH
Q 004314 512 MNEAEKQLRHEKHYRYV-STHDVAYWARSFF 541 (761)
Q Consensus 512 m~~~er~~r~~~~~~~v-~~~~~~~Wa~~~l 541 (761)
++ ++++.+.++.++++ +.+++...+++++
T Consensus 368 ~~-~~~~~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 368 DP-ALRRRLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred CH-HHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 74 45666667778887 7789998888775
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.89 E-value=2e-21 Score=222.78 Aligned_cols=276 Identities=16% Similarity=0.138 Sum_probs=195.8
Q ss_pred CCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCch---hHHhc---CcchHH--------HHH-HhhhcCEEeee
Q 004314 199 PEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSS---EIYRT---LPVREE--------ILK-ALLNADLIGFH 263 (761)
Q Consensus 199 ~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~---e~fr~---lp~r~~--------il~-~ll~~DligF~ 263 (761)
++.|+||+|+.....++..+.++..+.|+.++.|--++.. +++.. .+..+. +.+ .+..||.|...
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~Ii~~ 251 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAADRITTL 251 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhCCEEEec
Confidence 3569999998765555555545556889999999866532 22211 000011 111 12356666655
Q ss_pred CHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeec
Q 004314 264 TFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVD 343 (761)
Q Consensus 264 t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~Vd 343 (761)
+....+.... .| ....++.++|+|||.+.|.+.... ...+++++|+++|
T Consensus 252 s~~~~~~~~~-----~g---------------~~~~ki~vIpNgid~~~f~~~~~~-----------~~~~~~~~i~~vG 300 (475)
T cd03813 252 YEGNRERQIE-----DG---------------ADPEKIRVIPNGIDPERFAPARRA-----------RPEKEPPVVGLIG 300 (475)
T ss_pred CHHHHHHHHH-----cC---------------CCHHHeEEeCCCcCHHHcCCcccc-----------ccCCCCcEEEEEe
Confidence 4433222110 11 123467889999999988653210 1125678999999
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCH
Q 004314 344 DMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTL 423 (761)
Q Consensus 344 Rld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~ 423 (761)
|+.+.||+..+++|+..+.++.|+++ |+++|. +++..++.+++++++++.|.. ..|.|++ .
T Consensus 301 rl~~~Kg~~~li~a~~~l~~~~p~~~----l~IvG~-----g~~~~~~~~e~~~li~~l~l~------~~V~f~G----~ 361 (475)
T cd03813 301 RVVPIKDIKTFIRAAAIVRKKIPDAE----GWVIGP-----TDEDPEYAEECRELVESLGLE------DNVKFTG----F 361 (475)
T ss_pred ccccccCHHHHHHHHHHHHHhCCCeE----EEEECC-----CCcChHHHHHHHHHHHHhCCC------CeEEEcC----C
Confidence 99999999999999999998888765 887773 222235667778888776532 2466654 6
Q ss_pred HHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---------CcEEE
Q 004314 424 SERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---------GAIRV 494 (761)
Q Consensus 424 ~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---------~al~V 494 (761)
+++..+|+.||++|+||..|||+++++||||||. |+|+|+.+|+.+.+. .|+++
T Consensus 362 ~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~-----------------PVVatd~g~~~elv~~~~~~~~g~~G~lv 424 (475)
T cd03813 362 QNVKEYLPKLDVLVLTSISEGQPLVILEAMAAGI-----------------PVVATDVGSCRELIEGADDEALGPAGEVV 424 (475)
T ss_pred ccHHHHHHhCCEEEeCchhhcCChHHHHHHHcCC-----------------CEEECCCCChHHHhcCCcccccCCceEEE
Confidence 7899999999999999999999999999999986 899999999988873 38999
Q ss_pred CCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhh-CCHHHHHHHHHH
Q 004314 495 NPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVST-HDVAYWARSFFQ 542 (761)
Q Consensus 495 nP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~Wa~~~l~ 542 (761)
+|.|++++|++|.++++.+ ++++...++.++++.+ +++...+++|.+
T Consensus 425 ~~~d~~~la~ai~~ll~~~-~~~~~~~~~a~~~v~~~~s~~~~~~~y~~ 472 (475)
T cd03813 425 PPADPEALARAILRLLKDP-ELRRAMGEAGRKRVERYYTLERMIDSYRR 472 (475)
T ss_pred CCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 9999999999999999864 4566667778888876 466776766654
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.1e-21 Score=210.62 Aligned_cols=231 Identities=13% Similarity=0.112 Sum_probs=171.7
Q ss_pred hcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc--
Q 004314 256 NADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF-- 333 (761)
Q Consensus 256 ~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~-- 333 (761)
.+|.+...+....+.+... .+. ...++.++|+|||.+.|.+.... . ....++.+
T Consensus 136 ~~~~~i~vs~~~~~~~~~~----~~~---------------~~~~~~vi~ngvd~~~~~~~~~~---~--~~~~~~~~~~ 191 (374)
T TIGR03088 136 LIHHYVAVSRDLEDWLRGP----VKV---------------PPAKIHQIYNGVDTERFHPSRGD---R--SPILPPDFFA 191 (374)
T ss_pred cCCeEEEeCHHHHHHHHHh----cCC---------------ChhhEEEeccCccccccCCCccc---h--hhhhHhhcCC
Confidence 3677777777666555321 121 22467789999999888643211 1 11112222
Q ss_pred CCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCcc
Q 004314 334 EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEP 413 (761)
Q Consensus 334 ~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~p 413 (761)
.++.+|+++||+++.||+..+++|+..+++++|+...++.|+++|. |+.. +++++.+++.+ ...
T Consensus 192 ~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~-----g~~~----~~~~~~~~~~~-------~~~ 255 (374)
T TIGR03088 192 DESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGD-----GPAR----GACEQMVRAAG-------LAH 255 (374)
T ss_pred CCCeEEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecC-----CchH----HHHHHHHHHcC-------Ccc
Confidence 4678999999999999999999999999999887655678998873 3333 33444444433 223
Q ss_pred EEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---C
Q 004314 414 VVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---G 490 (761)
Q Consensus 414 V~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ 490 (761)
.+++.+. .+++..+|+.||++|+||..||||++++|||+||. |+|+|+.+|..+.+. .
T Consensus 256 ~v~~~g~--~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G~-----------------Pvv~s~~~g~~e~i~~~~~ 316 (374)
T TIGR03088 256 LVWLPGE--RDDVPALMQALDLFVLPSLAEGISNTILEAMASGL-----------------PVIATAVGGNPELVQHGVT 316 (374)
T ss_pred eEEEcCC--cCCHHHHHHhcCEEEeccccccCchHHHHHHHcCC-----------------CEEEcCCCCcHHHhcCCCc
Confidence 4455553 67899999999999999999999999999999986 999999999998883 3
Q ss_pred cEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHH-hhCCHHHHHHHHHHHHHH
Q 004314 491 AIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYV-STHDVAYWARSFFQDMER 546 (761)
Q Consensus 491 al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~Wa~~~l~~l~~ 546 (761)
|++++|.|++++|++|.++++.+ +++..+.++.++++ ..+++...++++++-.++
T Consensus 317 g~~~~~~d~~~la~~i~~l~~~~-~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 317 GALVPPGDAVALARALQPYVSDP-AARRAHGAAGRARAEQQFSINAMVAAYAGLYDQ 372 (374)
T ss_pred eEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 89999999999999999999854 45666667788887 578988888888776554
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=99.88 E-value=1e-20 Score=206.24 Aligned_cols=280 Identities=17% Similarity=0.208 Sum_probs=198.9
Q ss_pred HHHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHh-hhcCEEeeeCHHHHHH
Q 004314 192 RVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKAL-LNADLIGFHTFDYARH 270 (761)
Q Consensus 192 ~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~l-l~~DligF~t~~~~~~ 270 (761)
++++..+| |+||+|.+|..++..+++...+..++....|...+..-+ +..+.+.. ..++.+...+....+.
T Consensus 73 ~~~~~~~p--div~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~~------~~~~~~~~~~~~~~~~~~s~~~~~~ 144 (360)
T cd04951 73 KILRQFKP--DVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGRL------RMLAYRLTDFLSDLTTNVSKEALDY 144 (360)
T ss_pred HHHHhcCC--CEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhHH------HHHHHHHHhhccCceEEEcHHHHHH
Confidence 34455566 899999999888888887776777888888865332111 11111111 1245555555555555
Q ss_pred HHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc---CCCeEEEeecCccc
Q 004314 271 FLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDI 347 (761)
Q Consensus 271 Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~ 347 (761)
|+... + -...++.++|+|+|...|.+.. .....+++++ +++++++++||+.+
T Consensus 145 ~~~~~----~---------------~~~~~~~~i~ng~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~g~~~~ 199 (360)
T cd04951 145 FIASK----A---------------FNANKSFVVYNGIDTDRFRKDP------ARRLKIRNALGVKNDTFVILAVGRLVE 199 (360)
T ss_pred HHhcc----C---------------CCcccEEEEccccchhhcCcch------HHHHHHHHHcCcCCCCEEEEEEeeCch
Confidence 54310 0 0123678899999988875421 1123455555 46789999999999
Q ss_pred cCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHH
Q 004314 348 FKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERA 427 (761)
Q Consensus 348 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~ 427 (761)
.||+..+++|+.++.+++|+++ |+++|. +++.++ +.+.+.+.|.. ..|.++ ++ .+++.
T Consensus 200 ~kg~~~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~~----~~~~~~~~~~~------~~v~~~-g~--~~~~~ 257 (360)
T cd04951 200 AKDYPNLLKAFAKLLSDYLDIK----LLIAGD-----GPLRAT----LERLIKALGLS------NRVKLL-GL--RDDIA 257 (360)
T ss_pred hcCcHHHHHHHHHHHhhCCCeE----EEEEcC-----CCcHHH----HHHHHHhcCCC------CcEEEe-cc--cccHH
Confidence 9999999999999998888765 887773 343333 34444443311 136655 43 46899
Q ss_pred HHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc-CcEEECCCCHHHHHHHH
Q 004314 428 AYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-GAIRVNPWNIEATAEAM 506 (761)
Q Consensus 428 aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~al~VnP~d~~~~A~ai 506 (761)
.+|+.||++++||..||||++++|||+||. |+|+|+.+|..+.+. +++.++|.|++++|++|
T Consensus 258 ~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~-----------------PvI~~~~~~~~e~i~~~g~~~~~~~~~~~~~~i 320 (360)
T cd04951 258 AYYNAADLFVLSSAWEGFGLVVAEAMACEL-----------------PVVATDAGGVREVVGDSGLIVPISDPEALANKI 320 (360)
T ss_pred HHHHhhceEEecccccCCChHHHHHHHcCC-----------------CEEEecCCChhhEecCCceEeCCCCHHHHHHHH
Confidence 999999999999999999999999999976 899999998888885 58999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHhhH-HhhCCHHHHHHHHHHHH
Q 004314 507 HEAIQMNEAEKQLRHEKHYRY-VSTHDVAYWARSFFQDM 544 (761)
Q Consensus 507 ~~aL~m~~~er~~r~~~~~~~-v~~~~~~~Wa~~~l~~l 544 (761)
.+++++++..+..+.++ +++ .+.+++..+++++++-.
T Consensus 321 ~~ll~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~y 358 (360)
T cd04951 321 DEILKMSGEERDIIGAR-RERIVKKFSINSIVQQWLTLY 358 (360)
T ss_pred HHHHhCCHHHHHHHHHH-HHHHHHhcCHHHHHHHHHHHh
Confidence 99998777666665555 444 46789999999887654
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.7e-20 Score=205.94 Aligned_cols=274 Identities=16% Similarity=0.111 Sum_probs=193.5
Q ss_pred HHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCC----CchhHHhcCcchHHHHHH-hhhcCEEeeeCHHH
Q 004314 193 VIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPF----PSSEIYRTLPVREEILKA-LLNADLIGFHTFDY 267 (761)
Q Consensus 193 i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~Pf----P~~e~fr~lp~r~~il~~-ll~~DligF~t~~~ 267 (761)
+++..+| |+||+|+.+..+....+.++ .++|+.+.+|... +.............+.+. +..+|.+.+.+...
T Consensus 77 ~~~~~~~--dvvh~~~~~~~~~~~~~~~~-~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~ 153 (367)
T cd05844 77 LLRRHRP--DLVHAHFGFDGVYALPLARR-LGVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFIAVSQFI 153 (367)
T ss_pred HHHhhCC--CEEEeccCchHHHHHHHHHH-cCCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEEECCHHH
Confidence 4455566 89999977644443333333 4688888888432 111111000011122222 34679998888766
Q ss_pred HHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccc
Q 004314 268 ARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDI 347 (761)
Q Consensus 268 ~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~ 347 (761)
.+.+... |. ...++.++|+|+|.+.|.+... -.+++.++++||+.+
T Consensus 154 ~~~~~~~-----~~---------------~~~~i~vi~~g~d~~~~~~~~~--------------~~~~~~i~~~G~~~~ 199 (367)
T cd05844 154 RDRLLAL-----GF---------------PPEKVHVHPIGVDTAKFTPATP--------------ARRPPRILFVGRFVE 199 (367)
T ss_pred HHHHHHc-----CC---------------CHHHeEEecCCCCHHhcCCCCC--------------CCCCcEEEEEEeecc
Confidence 5555421 21 2235778999999988764210 134568999999999
Q ss_pred cCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHH
Q 004314 348 FKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERA 427 (761)
Q Consensus 348 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~ 427 (761)
.||+..+++|+..+.+++|+++ |+++|. ++. .+++++++++.+.. ..|. +.+.++.+++.
T Consensus 200 ~K~~~~li~a~~~l~~~~~~~~----l~ivG~-----g~~----~~~~~~~~~~~~~~------~~v~-~~g~~~~~~l~ 259 (367)
T cd05844 200 KKGPLLLLEAFARLARRVPEVR----LVIIGD-----GPL----LAALEALARALGLG------GRVT-FLGAQPHAEVR 259 (367)
T ss_pred ccChHHHHHHHHHHHHhCCCeE----EEEEeC-----chH----HHHHHHHHHHcCCC------CeEE-ECCCCCHHHHH
Confidence 9999999999999988888765 888873 332 23455555553211 1355 45689999999
Q ss_pred HHHHhcccceeccc------ccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCC
Q 004314 428 AYYTIAECVVVTAV------RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWN 498 (761)
Q Consensus 428 aly~~ADv~vvtS~------~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d 498 (761)
.+|+.||++|+||. .||||++++|||+||. |+|+|+.+|..+.+. .|++++|.|
T Consensus 260 ~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~-----------------PvI~s~~~~~~e~i~~~~~g~~~~~~d 322 (367)
T cd05844 260 ELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGV-----------------PVVATRHGGIPEAVEDGETGLLVPEGD 322 (367)
T ss_pred HHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCC-----------------CEEEeCCCCchhheecCCeeEEECCCC
Confidence 99999999999997 5999999999999976 999999999988773 489999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHhhHHh-hCCHHHHHHHHH
Q 004314 499 IEATAEAMHEAIQMNEAEKQLRHEKHYRYVS-THDVAYWARSFF 541 (761)
Q Consensus 499 ~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~Wa~~~l 541 (761)
+++++++|.++++.+ +.+.....+.++++. .+++..+++.+.
T Consensus 323 ~~~l~~~i~~l~~~~-~~~~~~~~~a~~~~~~~~s~~~~~~~l~ 365 (367)
T cd05844 323 VAALAAALGRLLADP-DLRARMGAAGRRRVEERFDLRRQTAKLE 365 (367)
T ss_pred HHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence 999999999999864 356666667788874 688888888764
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.1e-20 Score=201.58 Aligned_cols=268 Identities=20% Similarity=0.234 Sum_probs=194.2
Q ss_pred HHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHH
Q 004314 195 EVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSC 274 (761)
Q Consensus 195 ~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~ 274 (761)
+..+| |+|++|..+...+..++.+. .++|+.+.+|-.++.... ...+ +..+|.+.+.+....+.+.
T Consensus 75 ~~~~~--dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~------~~~~---~~~~~~vi~~s~~~~~~~~-- 140 (355)
T cd03819 75 REEKV--DIVHARSRAPAWSAYLAARR-TRPPFVTTVHGFYSVNFR------YNAI---MARGDRVIAVSNFIADHIR-- 140 (355)
T ss_pred HHcCC--CEEEECCCchhHHHHHHHHh-cCCCEEEEeCCchhhHHH------HHHH---HHhcCEEEEeCHHHHHHHH--
Confidence 33455 89999997766555554443 478999999987654321 1222 3468988887765555443
Q ss_pred HhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc---CCCeEEEeecCccccCCh
Q 004314 275 CSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIFKGV 351 (761)
Q Consensus 275 ~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi 351 (761)
...+. ...++.++|+|||...|.+.... ......+++++ .++++++++||+...||+
T Consensus 141 --~~~~~---------------~~~k~~~i~ngi~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~ 200 (355)
T cd03819 141 --ENYGV---------------DPDRIRVIPRGVDLDRFDPGAVP---PERILALAREWPLPKGKPVILLPGRLTRWKGQ 200 (355)
T ss_pred --HhcCC---------------ChhhEEEecCCccccccCccccc---hHHHHHHHHHcCCCCCceEEEEeeccccccCH
Confidence 11221 22367889999999988653221 11122245555 467899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHH
Q 004314 352 DLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYT 431 (761)
Q Consensus 352 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~ 431 (761)
..+++|+..+.+++++++ |+++|.. +..+.+.+++.+.+.+.+.. ..|.+++ . .+++..+|+
T Consensus 201 ~~li~~~~~l~~~~~~~~----l~ivG~~-----~~~~~~~~~~~~~~~~~~~~------~~v~~~g-~--~~~~~~~l~ 262 (355)
T cd03819 201 EVFIEALARLKKDDPDVH----LLIVGDA-----QGRRFYYAELLELIKRLGLQ------DRVTFVG-H--CSDMPAAYA 262 (355)
T ss_pred HHHHHHHHHHHhcCCCeE----EEEEECC-----cccchHHHHHHHHHHHcCCc------ceEEEcC-C--cccHHHHHH
Confidence 999999999988766655 8888843 22234445555555543311 1366654 4 778999999
Q ss_pred hcccceecc-cccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCHHHHHHHHH
Q 004314 432 IAECVVVTA-VRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMH 507 (761)
Q Consensus 432 ~ADv~vvtS-~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~ 507 (761)
.||++++|| ..||||++.+|||+||. |+|+|..+|..+.+. .|++++|.|+++++++|.
T Consensus 263 ~ad~~i~ps~~~e~~~~~l~EA~a~G~-----------------PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~ 325 (355)
T cd03819 263 LADIVVSASTEPEAFGRTAVEAQAMGR-----------------PVIASDHGGARETVRPGETGLLVPPGDAEALAQALD 325 (355)
T ss_pred hCCEEEecCCCCCCCchHHHHHHhcCC-----------------CEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHHHHH
Confidence 999999999 78999999999999986 899999988888773 489999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHhhHHhhC
Q 004314 508 EAIQMNEAEKQLRHEKHYRYVSTH 531 (761)
Q Consensus 508 ~aL~m~~~er~~r~~~~~~~v~~~ 531 (761)
.++...+++++...+++++++.++
T Consensus 326 ~~~~~~~~~~~~~~~~a~~~~~~~ 349 (355)
T cd03819 326 QILSLLPEGRAKMFAKARMCVETL 349 (355)
T ss_pred HHHhhCHHHHHHHHHHHHHHHHHh
Confidence 888877888888888888888764
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.9e-20 Score=209.78 Aligned_cols=273 Identities=17% Similarity=0.130 Sum_probs=183.9
Q ss_pred CCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcC-------------cchH--HH-----------H
Q 004314 198 NPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTL-------------PVRE--EI-----------L 251 (761)
Q Consensus 198 ~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~l-------------p~r~--~i-----------l 251 (761)
+| |+|..|--+...+ .+.+.++++|+++.+|-|.-+++.+..+ ..+. .+ +
T Consensus 107 ~p--Dv~i~~~g~~~~~--~~~~~~~~~~~i~y~h~P~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~~ 182 (419)
T cd03806 107 VP--DIFIDTMGYPFTY--PLVRLLGGCPVGAYVHYPTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYYRLFAFL 182 (419)
T ss_pred CC--CEEEEcCCcccHH--HHHHHhcCCeEEEEecCCcchHHHHHHHhhccccccCccchhccchHHHHHHHHHHHHHHH
Confidence 56 6555443233323 3556677899999999554344444221 1101 01 1
Q ss_pred H--HhhhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHH
Q 004314 252 K--ALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQEL 329 (761)
Q Consensus 252 ~--~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~l 329 (761)
. .+-.||.|-..+....++|.+ ..+ ...++.++|+|+|++.|.+...
T Consensus 183 ~~~~~~~aD~ii~~S~~~~~~~~~----~~~----------------~~~~~~vi~~gvd~~~~~~~~~----------- 231 (419)
T cd03806 183 YGLAGSFADVVMVNSTWTRNHIRS----LWK----------------RNTKPSIVYPPCDVEELLKLPL----------- 231 (419)
T ss_pred HHHHhhcCCEEEECCHHHHHHHHH----HhC----------------cCCCcEEEcCCCCHHHhccccc-----------
Confidence 1 134678877777655555432 111 1125778899999987753210
Q ss_pred HHHcCCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCc-CceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCC
Q 004314 330 KQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQ-GRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGR 408 (761)
Q Consensus 330 r~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~-~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~ 408 (761)
....++.+|++++|+.+.||+...|+||.++.+++|+.. .++.|+++|... ..+..++.+++++++++.+..
T Consensus 232 -~~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~---~~~~~~~~~~L~~~~~~l~l~--- 304 (419)
T cd03806 232 -DEKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCR---NEDDEKRVEDLKLLAKELGLE--- 304 (419)
T ss_pred -ccccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCC---CcccHHHHHHHHHHHHHhCCC---
Confidence 012456799999999999999999999999999887621 246688888532 112234566777777765522
Q ss_pred CCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcc-c
Q 004314 409 PGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSP-S 487 (761)
Q Consensus 409 ~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~-~ 487 (761)
..|+|+ +.++.+++..+|+.||++|.||..||||++++||||||. |+|+|..+|..+ .
T Consensus 305 ---~~V~f~-g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~-----------------pvIa~~~ggp~~~i 363 (419)
T cd03806 305 ---DKVEFV-VNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAGL-----------------IPLAHASGGPLLDI 363 (419)
T ss_pred ---CeEEEe-cCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcCC-----------------cEEEEcCCCCchhe
Confidence 146655 589999999999999999999999999999999999976 899998888654 3
Q ss_pred cc------CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHH
Q 004314 488 LS------GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAY 535 (761)
Q Consensus 488 l~------~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~ 535 (761)
+. .|++++ |++++|++|.+++++++.+++.+.+..++...+++...
T Consensus 364 v~~~~~g~~G~l~~--d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~fs~~~ 415 (419)
T cd03806 364 VVPWDGGPTGFLAS--TAEEYAEAIEKILSLSEEERLRIRRAARSSVKRFSDEE 415 (419)
T ss_pred eeccCCCCceEEeC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCHHH
Confidence 43 378874 99999999999999987666554444444445555443
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.86 E-value=1e-19 Score=200.05 Aligned_cols=286 Identities=14% Similarity=0.164 Sum_probs=197.1
Q ss_pred HHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHHhcC---CCeEEEEEecCCCchhHHhcCcchH-HHHHHhhhcCEEee
Q 004314 187 KIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFT---RLRMGFFLHSPFPSSEIYRTLPVRE-EILKALLNADLIGF 262 (761)
Q Consensus 187 ~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~---~~~ig~flH~PfP~~e~fr~lp~r~-~il~~ll~~DligF 262 (761)
+.+.+.+ +..+| |+|++|.+....++..+..+.. +.++.+.+|..-.. .....+... -+...+..+|.|.+
T Consensus 74 ~~l~~~i-~~~~~--divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~--~~~~~~~~~~~~~~~~~~~d~ii~ 148 (371)
T cd04962 74 SKIAEVA-KRYKL--DLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDIT--LVGQDPSFQPATRFSIEKSDGVTA 148 (371)
T ss_pred HHHHHHH-hcCCc--cEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccc--cccccccchHHHHHHHhhCCEEEE
Confidence 3444444 44455 8999998765555555544322 67888888853111 011112122 22334567999999
Q ss_pred eCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc---CCCeEE
Q 004314 263 HTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVL 339 (761)
Q Consensus 263 ~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vi 339 (761)
.+....+.+... .+ ...++.++|+|+|...|.+... ...++++ .+++++
T Consensus 149 ~s~~~~~~~~~~----~~----------------~~~~i~vi~n~~~~~~~~~~~~--------~~~~~~~~~~~~~~~i 200 (371)
T cd04962 149 VSESLRQETYEL----FD----------------ITKEIEVIPNFVDEDRFRPKPD--------EALKRRLGAPEGEKVL 200 (371)
T ss_pred cCHHHHHHHHHh----cC----------------CcCCEEEecCCcCHhhcCCCch--------HHHHHhcCCCCCCeEE
Confidence 998776665431 11 1125778999999887754211 1223343 468899
Q ss_pred EeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcC
Q 004314 340 LGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDK 419 (761)
Q Consensus 340 l~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~ 419 (761)
++++|+.+.||+..+++|++++.++ +++ .|+++|. +++...+ ++++.+.+. . ..|.+++
T Consensus 201 l~~g~l~~~K~~~~li~a~~~l~~~-~~~----~l~i~G~-----g~~~~~~----~~~~~~~~~----~--~~v~~~g- 259 (371)
T cd04962 201 IHISNFRPVKRIDDVIRIFAKVRKE-VPA----RLLLVGD-----GPERSPA----ERLARELGL----Q--DDVLFLG- 259 (371)
T ss_pred EEecccccccCHHHHHHHHHHHHhc-CCc----eEEEEcC-----CcCHHHH----HHHHHHcCC----C--ceEEEec-
Confidence 9999999999999999999988654 333 3777763 3443333 344444331 1 1366664
Q ss_pred CCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECC
Q 004314 420 PVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNP 496 (761)
Q Consensus 420 ~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP 496 (761)
. .+++..+|+.||++|+||..||||++++|||+||. |+|+|+.+|..+.+. .|++++|
T Consensus 260 ~--~~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g~-----------------PvI~s~~~~~~e~i~~~~~G~~~~~ 320 (371)
T cd04962 260 K--QDHVEELLSIADLFLLPSEKESFGLAALEAMACGV-----------------PVVASNAGGIPEVVKHGETGFLVDV 320 (371)
T ss_pred C--cccHHHHHHhcCEEEeCCCcCCCccHHHHHHHcCC-----------------CEEEeCCCCchhhhcCCCceEEcCC
Confidence 3 45799999999999999999999999999999976 999999999988873 4899999
Q ss_pred CCHHHHHHHHHHHHcCCHHHHHHHHHHHhhH-HhhCCHHHHHHHHHHHHHH
Q 004314 497 WNIEATAEAMHEAIQMNEAEKQLRHEKHYRY-VSTHDVAYWARSFFQDMER 546 (761)
Q Consensus 497 ~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~-v~~~~~~~Wa~~~l~~l~~ 546 (761)
.|++++|++|.++++.+ +++....++++++ ...+++...++++.+-+++
T Consensus 321 ~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~ 370 (371)
T cd04962 321 GDVEAMAEYALSLLEDD-ELWQEFSRAARNRAAERFDSERIVPQYEALYRR 370 (371)
T ss_pred CCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 99999999999999854 3555556667777 4568888888888766543
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=8e-21 Score=201.14 Aligned_cols=162 Identities=19% Similarity=0.200 Sum_probs=126.1
Q ss_pred ceeEEecCCCcCCCCC--CCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCCCceEEccCCeEEeecCCc
Q 004314 591 SRAILFDYDGTVMPQT--SINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADE 668 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~--~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~~l~liaehGa~ir~~~~~ 668 (761)
+++|++||||||++.. |..+.++++++++|++|++++++.|+|+|||++..+.++++.+ ++.++++||++++..++
T Consensus 14 ~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~-~~~~i~~nGa~i~~~~~- 91 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPY-RFPLAGVHGAERRDING- 91 (266)
T ss_pred CEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcc-cceEEEeCCCeeecCCC-
Confidence 6899999999999964 3456788999999999998789999999999999999999865 47899999999987644
Q ss_pred ceeecCcCcCcchHHHHHHHHHHHhcCCCccEEEecCceEEEEcccCCCCCchHHHHHHHHHHHHHhcCCCcEEEeCCeE
Q 004314 669 EWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFI 748 (761)
Q Consensus 669 ~w~~~~~~~~~~w~~~v~~im~~y~~~t~Gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~~v~V~~G~~~ 748 (761)
.|.. .....+|...+...++.+..+++|+++|.|+.+++|||++++.+ .....++.+.+.+.+. .+.+.+|+.+
T Consensus 92 ~~~~--~~l~~~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~~~--~~~~~~l~~~i~~~~~--~~~~~~g~~~ 165 (266)
T PRK10187 92 KTHI--VHLPDAIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAPQH--EDALLALAQRITQIWP--QLALQPGKCV 165 (266)
T ss_pred Ceee--ccCChhHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCCcc--HHHHHHHHHHHHhhCC--ceEEeCCCEE
Confidence 3432 12345666666667777788999999999999999999988321 1222233333333221 3677889999
Q ss_pred EEEEeCCCCcCC
Q 004314 749 VEVKPQVYIQLR 760 (761)
Q Consensus 749 vEV~p~gvnKG~ 760 (761)
+||+|+++|||+
T Consensus 166 lEi~p~g~~Kg~ 177 (266)
T PRK10187 166 VEIKPRGTNKGE 177 (266)
T ss_pred EEeeCCCCCHHH
Confidence 999999999985
|
|
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.5e-20 Score=207.76 Aligned_cols=290 Identities=11% Similarity=0.072 Sum_probs=190.6
Q ss_pred HHHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeE-EEEEecCCCchhHHhcCcchHHHH----HHhhhcCEEeeeCHH
Q 004314 192 RVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRM-GFFLHSPFPSSEIYRTLPVREEIL----KALLNADLIGFHTFD 266 (761)
Q Consensus 192 ~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i-g~flH~PfP~~e~fr~lp~r~~il----~~ll~~DligF~t~~ 266 (761)
.++...+| |+||.|++...+++.+..... .+++ ....|. ++... ++.++ +.+..++++.-.+.
T Consensus 274 ~~ir~~rp--DIVHt~~~~a~l~g~laA~la-gvpviv~~~h~-~~~~~-------~~r~~~~e~~~~~~a~~i~~~sd- 341 (578)
T PRK15490 274 PHLCERKL--DYLSVWQDGACLMIALAALIA-GVPRIQLGLRG-LPPVV-------RKRLFKPEYEPLYQALAVVPGVD- 341 (578)
T ss_pred HHHHHcCC--CEEEEcCcccHHHHHHHHHhc-CCCEEEEeecc-cCCcc-------hhhHHHHHHHHhhhhceeEecch-
Confidence 34455566 899999999877766665543 4555 445675 33211 11111 11233444332222
Q ss_pred HHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc-CCCeEEEeecCc
Q 004314 267 YARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF-EGKTVLLGVDDM 345 (761)
Q Consensus 267 ~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VdRl 345 (761)
+..+.....+.+.. .+.-...+|.++|+|||++.|.+....+ ......++..+ .+..+|++|+|+
T Consensus 342 ~v~~s~~v~~~l~~------------~lgip~~KI~VIyNGVD~~rf~p~~~~~--~~~r~~~~~~l~~~~~vIg~VgRl 407 (578)
T PRK15490 342 FMSNNHCVTRHYAD------------WLKLEAKHFQVVYNGVLPPSTEPSSEVP--HKIWQQFTQKTQDADTTIGGVFRF 407 (578)
T ss_pred hhhccHHHHHHHHH------------HhCCCHHHEEEEeCCcchhhcCccchhh--HHHHHHhhhccCCCCcEEEEEEEE
Confidence 33222211111110 0111335788999999999887642111 11122223333 345688899999
Q ss_pred cccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHH
Q 004314 346 DIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSE 425 (761)
Q Consensus 346 d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~e 425 (761)
...||....++|+.++++++|+++ |+++| +|+.. +++++++++.+.. ..|+|++ . .++
T Consensus 408 ~~~Kg~~~LI~A~a~llk~~pdir----LvIVG-----dG~~~----eeLk~la~elgL~------d~V~FlG-~--~~D 465 (578)
T PRK15490 408 VGDKNPFAWIDFAARYLQHHPATR----FVLVG-----DGDLR----AEAQKRAEQLGIL------ERILFVG-A--SRD 465 (578)
T ss_pred ehhcCHHHHHHHHHHHHhHCCCeE----EEEEe-----CchhH----HHHHHHHHHcCCC------CcEEECC-C--hhh
Confidence 999999999999999999888766 88887 34433 4455555554421 2477664 3 578
Q ss_pred HHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCHHHH
Q 004314 426 RAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEAT 502 (761)
Q Consensus 426 l~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~ 502 (761)
+..+|+.||+||+||.+|||+++++|||+||. |+|+|..+|+.+.+. +|++|+|.|++++
T Consensus 466 v~~~LaaADVfVlPS~~EGfp~vlLEAMA~Gl-----------------PVVATdvGG~~EiV~dG~nG~LVp~~D~~aL 528 (578)
T PRK15490 466 VGYWLQKMNVFILFSRYEGLPNVLIEAQMVGV-----------------PVISTPAGGSAECFIEGVSGFILDDAQTVNL 528 (578)
T ss_pred HHHHHHhCCEEEEcccccCccHHHHHHHHhCC-----------------CEEEeCCCCcHHHcccCCcEEEECCCChhhH
Confidence 99999999999999999999999999999986 999999999998873 4999999999999
Q ss_pred HHHHHHHHcCCH--HHHHHHHHHHhhHHh-hCCHHHHHHHHHHHHHH
Q 004314 503 AEAMHEAIQMNE--AEKQLRHEKHYRYVS-THDVAYWARSFFQDMER 546 (761)
Q Consensus 503 A~ai~~aL~m~~--~er~~r~~~~~~~v~-~~~~~~Wa~~~l~~l~~ 546 (761)
++++..+..+.. .++....++.++++. ++++...++.|++.++.
T Consensus 529 a~ai~lA~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 529 DQACRYAEKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 998854433222 233344567788875 58999989888877654
|
|
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.8e-20 Score=200.64 Aligned_cols=257 Identities=15% Similarity=0.114 Sum_probs=176.4
Q ss_pred HHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHH-HhhhcCEEeeeCHHHHHHHH
Q 004314 194 IEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILK-ALLNADLIGFHTFDYARHFL 272 (761)
Q Consensus 194 ~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~-~ll~~DligF~t~~~~~~Fl 272 (761)
.+..++ |+|++|..+...++.++.++.....+.+..|..+...+.+........+.+ .+..+|.+-..+....+.+.
T Consensus 76 ~~~~~~--Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~ 153 (358)
T cd03812 76 IKKNKY--DIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHDKKKKILKYKVLRKLINRLATDYLACSEEAGKWLF 153 (358)
T ss_pred HhcCCC--CEEEEeCcchhHHHHHHHhhCCCCeEEEEeccccccccccchhhHHHHHHHHHHhcCCEEEEcCHHHHHHHH
Confidence 344454 899999988767777766665555567778877654432221111101111 12346776666655444432
Q ss_pred HHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc---CCCeEEEeecCccccC
Q 004314 273 SCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIFK 349 (761)
Q Consensus 273 ~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~K 349 (761)
.. ....++.++|+|||...+..... ..+ . ++++ .++.+|+++||+++.|
T Consensus 154 ~~---------------------~~~~~~~vi~ngvd~~~~~~~~~---~~~---~-~~~~~~~~~~~~i~~vGr~~~~K 205 (358)
T cd03812 154 GK---------------------VKNKKFKVIPNGIDLEKFIFNEE---IRK---K-RRELGILEDKFVIGHVGRFSEQK 205 (358)
T ss_pred hC---------------------CCcccEEEEeccCcHHHcCCCch---hhh---H-HHHcCCCCCCEEEEEEecccccc
Confidence 10 01236788999999988764321 111 1 2222 5788999999999999
Q ss_pred ChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHH
Q 004314 350 GVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAY 429 (761)
Q Consensus 350 Gi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~al 429 (761)
|+..+++|+..+.+++|+++ |+++|. ++..+. +++.+++.+. ...|.+++ . .+++..+
T Consensus 206 g~~~li~a~~~l~~~~~~~~----l~ivG~-----g~~~~~----~~~~~~~~~~------~~~v~~~g-~--~~~~~~~ 263 (358)
T cd03812 206 NHEFLIEIFAELLKKNPNAK----LLLVGD-----GELEEE----IKKKVKELGL------EDKVIFLG-V--RNDVPEL 263 (358)
T ss_pred ChHHHHHHHHHHHHhCCCeE----EEEEeC-----CchHHH----HHHHHHhcCC------CCcEEEec-c--cCCHHHH
Confidence 99999999999999998766 888873 443333 3344433321 12466554 3 6789999
Q ss_pred HHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc--CcEEECCCCHHHHHHHHH
Q 004314 430 YTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS--GAIRVNPWNIEATAEAMH 507 (761)
Q Consensus 430 y~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~al~VnP~d~~~~A~ai~ 507 (761)
|+.||++|+||..||||++++||||||. |+|+|+.+|..+.+. ++++..+.+++++|++|.
T Consensus 264 ~~~adi~v~ps~~E~~~~~~lEAma~G~-----------------PvI~s~~~~~~~~i~~~~~~~~~~~~~~~~a~~i~ 326 (358)
T cd03812 264 LQAMDVFLFPSLYEGLPLVLIEAQASGL-----------------PCILSDTITKEVDLTDLVKFLSLDESPEIWAEEIL 326 (358)
T ss_pred HHhcCEEEecccccCCCHHHHHHHHhCC-----------------CEEEEcCCchhhhhccCccEEeCCCCHHHHHHHHH
Confidence 9999999999999999999999999976 999999999888884 355666667899999999
Q ss_pred HHHcCCHHHHHH
Q 004314 508 EAIQMNEAEKQL 519 (761)
Q Consensus 508 ~aL~m~~~er~~ 519 (761)
+++++|+..+..
T Consensus 327 ~l~~~~~~~~~~ 338 (358)
T cd03812 327 KLKSEDRRERSS 338 (358)
T ss_pred HHHhCcchhhhh
Confidence 999998754444
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.6e-19 Score=201.25 Aligned_cols=283 Identities=16% Similarity=0.167 Sum_probs=196.8
Q ss_pred CCEEEEeCCccch-HHHHHHHhcCCCeEEEEEecCCCchhHH-hcC--cchH----HHHHH-hhhcCEEeeeCHHHHHHH
Q 004314 201 DDYVWIHDYHLMV-LPTFLRRRFTRLRMGFFLHSPFPSSEIY-RTL--PVRE----EILKA-LLNADLIGFHTFDYARHF 271 (761)
Q Consensus 201 ~DiVwvhDyhl~l-lp~~lr~~~~~~~ig~flH~PfP~~e~f-r~l--p~r~----~il~~-ll~~DligF~t~~~~~~F 271 (761)
.|+||+|...+.. ...++-.+..+.++.+..|--||..-+- ... +... .+.+. +..+|.|.+.+....+.+
T Consensus 107 ~Div~~~~p~~~~~~~~~~~~~~~~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~ 186 (412)
T PRK10307 107 PDRVIGVVPTLFCAPGARLLARLSGARTWLHIQDYEVDAAFGLGLLKGGKVARLATAFERSLLRRFDNVSTISRSMMNKA 186 (412)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHhhCCCEEEEeccCCHHHHHHhCCccCcHHHHHHHHHHHHHHhhCCEEEecCHHHHHHH
Confidence 3899999866542 2222223334567887777656532110 001 0001 11122 346899988888777665
Q ss_pred HHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc---CCCeEEEeecCcccc
Q 004314 272 LSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIF 348 (761)
Q Consensus 272 l~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~ 348 (761)
.+ .+. ...++.++|+|||.+.|.+... .....+++++ .++++++++||+.+.
T Consensus 187 ~~-----~~~---------------~~~~i~vi~ngvd~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~G~l~~~ 241 (412)
T PRK10307 187 RE-----KGV---------------AAEKVIFFPNWSEVARFQPVAD-----ADVDALRAQLGLPDGKKIVLYSGNIGEK 241 (412)
T ss_pred HH-----cCC---------------CcccEEEECCCcCHhhcCCCCc-----cchHHHHHHcCCCCCCEEEEEcCccccc
Confidence 32 121 2346788999999988865321 1123355555 356899999999999
Q ss_pred CChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHH
Q 004314 349 KGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAA 428 (761)
Q Consensus 349 KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~a 428 (761)
||+..+++|++++ +++|++ .|+++| +|+.. +++++++++.+ ...|+|+ |.++.+++..
T Consensus 242 kg~~~li~a~~~l-~~~~~~----~l~ivG-----~g~~~----~~l~~~~~~~~-------l~~v~f~-G~~~~~~~~~ 299 (412)
T PRK10307 242 QGLELVIDAARRL-RDRPDL----IFVICG-----QGGGK----ARLEKMAQCRG-------LPNVHFL-PLQPYDRLPA 299 (412)
T ss_pred cCHHHHHHHHHHh-ccCCCe----EEEEEC-----CChhH----HHHHHHHHHcC-------CCceEEe-CCCCHHHHHH
Confidence 9999999999876 445654 488877 34443 34455554433 2247765 6899999999
Q ss_pred HHHhcccceecccccCCCcc----hhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCC--cccc-cCcEEECCCCHHH
Q 004314 429 YYTIAECVVVTAVRDGMNLT----PYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGC--SPSL-SGAIRVNPWNIEA 501 (761)
Q Consensus 429 ly~~ADv~vvtS~~EGmnLv----~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~--~~~l-~~al~VnP~d~~~ 501 (761)
+|+.||++|+||..|+++++ .+|||+||. |+|+|..+|. .+.+ ..|++++|.|+++
T Consensus 300 ~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~-----------------PVi~s~~~g~~~~~~i~~~G~~~~~~d~~~ 362 (412)
T PRK10307 300 LLKMADCHLLPQKAGAADLVLPSKLTNMLASGR-----------------NVVATAEPGTELGQLVEGIGVCVEPESVEA 362 (412)
T ss_pred HHHhcCEeEEeeccCcccccCcHHHHHHHHcCC-----------------CEEEEeCCCchHHHHHhCCcEEeCCCCHHH
Confidence 99999999999999996554 699999976 8999988774 3444 4699999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHhhHHh-hCCHHHHHHHHHHHHHHHH
Q 004314 502 TAEAMHEAIQMNEAEKQLRHEKHYRYVS-THDVAYWARSFFQDMERTC 548 (761)
Q Consensus 502 ~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~Wa~~~l~~l~~~~ 548 (761)
+|++|.++++++ +++..+.++.++++. .+++...+++|++.+++.-
T Consensus 363 la~~i~~l~~~~-~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~ 409 (412)
T PRK10307 363 LVAAIAALARQA-LLRPKLGTVAREYAERTLDKENVLRQFIADIRGLV 409 (412)
T ss_pred HHHHHHHHHhCH-HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh
Confidence 999999998865 466667777888886 5899999999998887653
|
|
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.2e-19 Score=201.72 Aligned_cols=281 Identities=15% Similarity=0.144 Sum_probs=188.2
Q ss_pred CCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHH---------HhhhcCEEeeeCHHHHHH
Q 004314 200 EDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILK---------ALLNADLIGFHTFDYARH 270 (761)
Q Consensus 200 ~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~---------~ll~~DligF~t~~~~~~ 270 (761)
..|+|++|+..... + +++.. .+.++.+..|.| .........+...+.+ .+..+|.|...+......
T Consensus 94 ~~Dvi~~~~~~~~~-~-~~~~~-~~~~~i~~~h~~--~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~s~~~~~~ 168 (392)
T cd03805 94 KYDVFIVDQVSACV-P-LLKLF-SPSKILFYCHFP--DQLLAQRGSLLKRLYRKPFDWLEEFTTGMADKIVVNSNFTASV 168 (392)
T ss_pred CCCEEEEcCcchHH-H-HHHHh-cCCcEEEEEecC--hHHhcCCCcHHHHHHHHHHHHHHHHHhhCceEEEEcChhHHHH
Confidence 35999999866432 2 23332 337899999954 2211110111111111 134578887776654444
Q ss_pred HHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCC
Q 004314 271 FLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKG 350 (761)
Q Consensus 271 Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KG 350 (761)
+.. .++. .....+.++|+|||.+.|.+....+ ..+.....+++.+++++||+.+.||
T Consensus 169 ~~~----~~~~--------------~~~~~~~vi~n~vd~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~grl~~~Kg 225 (392)
T cd03805 169 FKK----TFPS--------------LAKNPREVVYPCVDTDSFESTSEDP-----DPGLLIPKSGKKTFLSINRFERKKN 225 (392)
T ss_pred HHH----Hhcc--------------cccCCcceeCCCcCHHHcCcccccc-----cccccccCCCceEEEEEeeecccCC
Confidence 432 1110 0111235789999998886532110 0111112257789999999999999
Q ss_pred hHHHHHHHHHHHHhC---CCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHH-HhcccCCCCCccEEEEcCCCCHHHH
Q 004314 351 VDLKLLAMEHLLKQH---PKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKR-INETFGRPGYEPVVFIDKPVTLSER 426 (761)
Q Consensus 351 i~~~l~A~~~ll~~~---P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~-in~~~g~~~~~pV~~~~~~v~~~el 426 (761)
+..+++|++++.+++ |+++ |+++|.... ..++..++.+++++++++ .+.. ..|+|+ |.++.+++
T Consensus 226 ~~~ll~a~~~l~~~~~~~~~~~----l~i~G~~~~-~~~~~~~~~~~l~~~~~~~~~l~------~~V~f~-g~~~~~~~ 293 (392)
T cd03805 226 IALAIEAFAILKDKLAEFKNVR----LVIAGGYDP-RVAENVEYLEELQRLAEELLLLE------DQVIFL-PSISDSQK 293 (392)
T ss_pred hHHHHHHHHHHHhhcccccCeE----EEEEcCCCC-CCchhHHHHHHHHHHHHHhcCCC------ceEEEe-CCCChHHH
Confidence 999999999998877 6554 888885321 112233455667777665 3311 246655 68999999
Q ss_pred HHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCHHHHH
Q 004314 427 AAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATA 503 (761)
Q Consensus 427 ~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A 503 (761)
..+|+.||++++||..||||++++|||+||. |+|+|+.+|..+.+. .|++++| |++++|
T Consensus 294 ~~~l~~ad~~l~~s~~E~~g~~~lEAma~G~-----------------PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a 355 (392)
T cd03805 294 ELLLSSARALLYTPSNEHFGIVPLEAMYAGK-----------------PVIACNSGGPLETVVDGETGFLCEP-TPEEFA 355 (392)
T ss_pred HHHHhhCeEEEECCCcCCCCchHHHHHHcCC-----------------CEEEECCCCcHHHhccCCceEEeCC-CHHHHH
Confidence 9999999999999999999999999999976 999999999888773 3788877 999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHhhHHh-hCCHHHHHHH
Q 004314 504 EAMHEAIQMNEAEKQLRHEKHYRYVS-THDVAYWARS 539 (761)
Q Consensus 504 ~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~Wa~~ 539 (761)
++|.++++.++ +++.+.++.++++. .+++...+++
T Consensus 356 ~~i~~l~~~~~-~~~~~~~~a~~~~~~~~s~~~~~~~ 391 (392)
T cd03805 356 EAMLKLANDPD-LADRMGAAGRKRVKEKFSTEAFAER 391 (392)
T ss_pred HHHHHHHhChH-HHHHHHHHHHHHHHHhcCHHHHhhh
Confidence 99999999764 56666677788774 5777776654
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.5e-19 Score=203.72 Aligned_cols=315 Identities=15% Similarity=0.140 Sum_probs=211.2
Q ss_pred ccccccccccccccccCCCCCCCccChHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCc-cchHHHHHHHhcCCCeEE
Q 004314 150 GFCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYH-LMVLPTFLRRRFTRLRMG 228 (761)
Q Consensus 150 gf~~~~LWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyh-l~llp~~lr~~~~~~~ig 228 (761)
.+-..-.||-||.+.. .-...|.++..+.+ +. |.|||-.-- ..-+| ++| +.+.|++
T Consensus 108 ~~~~~~~~~~~t~~~~--------~~~~~~l~~~~~~~---------~~---p~v~vDt~~~~~~~p-l~~--~~~~~v~ 164 (463)
T PLN02949 108 KWIEEETYPRFTMIGQ--------SLGSVYLAWEALCK---------FT---PLYFFDTSGYAFTYP-LAR--LFGCKVV 164 (463)
T ss_pred cccccccCCceehHHH--------HHHHHHHHHHHHHh---------cC---CCEEEeCCCcccHHH-HHH--hcCCcEE
Confidence 3445566887776532 23566777765432 12 347775322 12223 344 3478999
Q ss_pred EEEecCCCchhHHhcCcch-------------------HH----H---HHH--hhhcCEEeeeCHHHHHHHHHHHhhhcC
Q 004314 229 FFLHSPFPSSEIYRTLPVR-------------------EE----I---LKA--LLNADLIGFHTFDYARHFLSCCSRMLG 280 (761)
Q Consensus 229 ~flH~PfP~~e~fr~lp~r-------------------~~----i---l~~--ll~~DligF~t~~~~~~Fl~~~~r~lg 280 (761)
+.+|.|.-+.+....+-.+ +. . +.. +-.+|.|...+....+++.+ ..+
T Consensus 165 ~yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~nS~~t~~~l~~----~~~ 240 (463)
T PLN02949 165 CYTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEA----LWR 240 (463)
T ss_pred EEEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEECCHHHHHHHHH----HcC
Confidence 9999886565443322000 00 0 111 24568777776655555532 111
Q ss_pred ceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHHHHHHH
Q 004314 281 LEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEH 360 (761)
Q Consensus 281 ~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ 360 (761)
...+++++++|+|.+.+... + . ....+++++++|+|+.+.||+..+|+||.+
T Consensus 241 ----------------~~~~i~vvyp~vd~~~~~~~---~-~--------~~~~~~~~il~vGR~~~~Kg~~llI~A~~~ 292 (463)
T PLN02949 241 ----------------IPERIKRVYPPCDTSGLQAL---P-L--------ERSEDPPYIISVAQFRPEKAHALQLEAFAL 292 (463)
T ss_pred ----------------CCCCeEEEcCCCCHHHcccC---C-c--------cccCCCCEEEEEEeeeccCCHHHHHHHHHH
Confidence 11256778899998766321 0 0 011345789999999999999999999999
Q ss_pred HHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecc
Q 004314 361 LLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTA 440 (761)
Q Consensus 361 ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS 440 (761)
++++.++-..++.|+++|... .++..++.+++++++++.+.. ..|.|+ +.++.+++.++|+.||++|.||
T Consensus 293 l~~~~~~~~~~~~LvIvG~~~---~~~~~~~~~eL~~la~~l~L~------~~V~f~-g~v~~~el~~ll~~a~~~v~~s 362 (463)
T PLN02949 293 ALEKLDADVPRPKLQFVGSCR---NKEDEERLQKLKDRAKELGLD------GDVEFH-KNVSYRDLVRLLGGAVAGLHSM 362 (463)
T ss_pred HHHhccccCCCcEEEEEeCCC---CcccHHHHHHHHHHHHHcCCC------CcEEEe-CCCCHHHHHHHHHhCcEEEeCC
Confidence 887543211234598888531 122234556677777665421 136665 6899999999999999999999
Q ss_pred cccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcc-ccc------CcEEECCCCHHHHHHHHHHHHcCC
Q 004314 441 VRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSP-SLS------GAIRVNPWNIEATAEAMHEAIQMN 513 (761)
Q Consensus 441 ~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~-~l~------~al~VnP~d~~~~A~ai~~aL~m~ 513 (761)
..||||++++||||||. |+|+|..+|..+ .+. .|++++ |++++|++|.++++++
T Consensus 363 ~~E~FGivvlEAMA~G~-----------------PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~la~ai~~ll~~~ 423 (463)
T PLN02949 363 IDEHFGISVVEYMAAGA-----------------VPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEEYADAILEVLRMR 423 (463)
T ss_pred ccCCCChHHHHHHHcCC-----------------cEEEeCCCCCcceeeecCCCCcccccCC--CHHHHHHHHHHHHhCC
Confidence 99999999999999976 899999888753 332 267764 9999999999999988
Q ss_pred HHHHHHHHHHHhhHHhhCCHHHHHHHHHHHHHHHH
Q 004314 514 EAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERTC 548 (761)
Q Consensus 514 ~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l~~~~ 548 (761)
++++++..++.++.+.+++...-++++++.+....
T Consensus 424 ~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l~ 458 (463)
T PLN02949 424 ETERLEIAAAARKRANRFSEQRFNEDFKDAIRPIL 458 (463)
T ss_pred HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 77777777888889999999998888888777543
|
|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1e-19 Score=214.12 Aligned_cols=281 Identities=14% Similarity=0.109 Sum_probs=184.1
Q ss_pred HHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEE-EEecCCCc---hhHHhcCcchHHHHHHhhhcCEEee--eCHHHH
Q 004314 195 EVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGF-FLHSPFPS---SEIYRTLPVREEILKALLNADLIGF--HTFDYA 268 (761)
Q Consensus 195 ~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~-flH~PfP~---~e~fr~lp~r~~il~~ll~~DligF--~t~~~~ 268 (761)
+..+| |||++|++.-.++..+..+. .++|+.+ .+|+ +|. .+.++. ....+.+.+..++.+.+ .+....
T Consensus 397 k~~kp--DIVH~h~~~a~~lg~lAa~~-~gvPvIv~t~h~-~~~~~~~~~~~~--~~~~l~~~l~~~~~~i~Vs~S~~~~ 470 (694)
T PRK15179 397 RSSVP--SVVHIWQDGSIFACALAALL-AGVPRIVLSVRT-MPPVDRPDRYRV--EYDIIYSELLKMRGVALSSNSQFAA 470 (694)
T ss_pred HHcCC--cEEEEeCCcHHHHHHHHHHH-cCCCEEEEEeCC-CccccchhHHHH--HHHHHHHHHHhcCCeEEEeCcHHHH
Confidence 33355 89999999987777766654 3566544 4564 221 121110 01112233333443322 233223
Q ss_pred HHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc-CCCeEEEeecCccc
Q 004314 269 RHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF-EGKTVLLGVDDMDI 347 (761)
Q Consensus 269 ~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VdRld~ 347 (761)
+.+.. .++ ....+|.++|+|||+..|.+. +........++... .+.++|++|+|+++
T Consensus 471 ~~l~~----~~g---------------~~~~kI~VI~NGVd~~~f~~~---~~~~~~~~~~~~~~~~~~~vIg~VGRL~~ 528 (694)
T PRK15179 471 HRYAD----WLG---------------VDERRIPVVYNGLAPLKSVQD---DACTAMMAQFDARTSDARFTVGTVMRVDD 528 (694)
T ss_pred HHHHH----HcC---------------CChhHEEEECCCcCHHhcCCC---chhhHHHHhhccccCCCCeEEEEEEeCCc
Confidence 33321 112 123478899999999888532 11111112222222 34678999999999
Q ss_pred cCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHH
Q 004314 348 FKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERA 427 (761)
Q Consensus 348 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~ 427 (761)
.||+..+++|+.++++++|+++ |+++|. |+.. +++++++++.+.. ..|+|+ |.. +++.
T Consensus 529 ~KG~~~LI~A~a~l~~~~p~~~----LvIvG~-----G~~~----~~L~~l~~~lgL~------~~V~fl-G~~--~dv~ 586 (694)
T PRK15179 529 NKRPFLWVEAAQRFAASHPKVR----FIMVGG-----GPLL----ESVREFAQRLGMG------ERILFT-GLS--RRVG 586 (694)
T ss_pred cCCHHHHHHHHHHHHHHCcCeE----EEEEcc-----Ccch----HHHHHHHHHcCCC------CcEEEc-CCc--chHH
Confidence 9999999999999999999876 888884 3332 4455666554421 135554 554 5799
Q ss_pred HHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCH--HHH
Q 004314 428 AYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNI--EAT 502 (761)
Q Consensus 428 aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~--~~~ 502 (761)
.+|+.||++|+||.+|||+++++|||+||. |+|+|..+|+.+.+. +|++|+|.|. +++
T Consensus 587 ~ll~aaDv~VlpS~~Egfp~vlLEAMA~G~-----------------PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~L 649 (694)
T PRK15179 587 YWLTQFNAFLLLSRFEGLPNVLIEAQFSGV-----------------PVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDV 649 (694)
T ss_pred HHHHhcCEEEeccccccchHHHHHHHHcCC-----------------eEEEECCCChHHHccCCCCEEEeCCCCCChHHH
Confidence 999999999999999999999999999976 999999999998883 4899998875 689
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHhhHHh-hCCHHHHHHHHHHH
Q 004314 503 AEAMHEAIQMNEAEKQLRHEKHYRYVS-THDVAYWARSFFQD 543 (761)
Q Consensus 503 A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~Wa~~~l~~ 543 (761)
+++|.+++...... ....++.++++. .+++..-++++++-
T Consensus 650 a~aL~~ll~~l~~~-~~l~~~ar~~a~~~FS~~~~~~~~~~l 690 (694)
T PRK15179 650 AEALARIHDMCAAD-PGIARKAADWASARFSLNQMIASTVRC 690 (694)
T ss_pred HHHHHHHHhChhcc-HHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 99999888754322 233456677764 67877777766553
|
|
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.3e-19 Score=197.06 Aligned_cols=272 Identities=19% Similarity=0.182 Sum_probs=196.4
Q ss_pred CEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCch--hHHhc---CcchHHHHHHhhhcCEEeeeCHHHHHHHHHHHh
Q 004314 202 DYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSS--EIYRT---LPVREEILKALLNADLIGFHTFDYARHFLSCCS 276 (761)
Q Consensus 202 DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~--e~fr~---lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~~ 276 (761)
|+||+|.+..... +..+.++.+.+|..+|.. +.+.. ...+..+...+..+|.+.+.+...++.+.+..
T Consensus 87 Dii~~~~~~~~~~------~~~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~- 159 (365)
T cd03809 87 DLLHSPHNTAPLL------RLRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDLLRYL- 159 (365)
T ss_pred CeeeecccccCcc------cCCCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHHHHHh-
Confidence 8999998877665 456889999999765432 11110 11223344456688999998887776665321
Q ss_pred hhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHHH
Q 004314 277 RMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLL 356 (761)
Q Consensus 277 r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~ 356 (761)
+. ...++.++|+|+|...+..... +. ........++++|+++||+.+.||+..+++
T Consensus 160 ---~~---------------~~~~~~vi~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~i~~~G~~~~~K~~~~~l~ 215 (365)
T cd03809 160 ---GV---------------PPDKIVVIPLGVDPRFRPPPAE-----AE-VLRALYLLPRPYFLYVGTIEPRKNLERLLE 215 (365)
T ss_pred ---Cc---------------CHHHEEeeccccCccccCCCch-----HH-HHHHhcCCCCCeEEEeCCCccccCHHHHHH
Confidence 11 1235778999999887754211 11 111122357889999999999999999999
Q ss_pred HHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccc
Q 004314 357 AMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECV 436 (761)
Q Consensus 357 A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~ 436 (761)
|+..+.+.+|+.+ |+++|... .........+ .+.+ ....+.+.+.++.+++..+|+.||++
T Consensus 216 ~~~~~~~~~~~~~----l~i~G~~~----~~~~~~~~~~----~~~~-------~~~~v~~~g~~~~~~~~~~~~~~d~~ 276 (365)
T cd03809 216 AFARLPAKGPDPK----LVIVGKRG----WLNEELLARL----RELG-------LGDRVRFLGYVSDEELAALYRGARAF 276 (365)
T ss_pred HHHHHHHhcCCCC----EEEecCCc----cccHHHHHHH----HHcC-------CCCeEEECCCCChhHHHHHHhhhhhh
Confidence 9999998887544 88777432 1222222222 1221 12334456799999999999999999
Q ss_pred eecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc-CcEEECCCCHHHHHHHHHHHHcCCHH
Q 004314 437 VVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-GAIRVNPWNIEATAEAMHEAIQMNEA 515 (761)
Q Consensus 437 vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~al~VnP~d~~~~A~ai~~aL~m~~~ 515 (761)
++||..||+|++++|||+||. |+|+|+.+|..+.+. +++.++|.|+++++++|.++++.+ +
T Consensus 277 l~ps~~e~~~~~~~Ea~a~G~-----------------pvI~~~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~l~~~~-~ 338 (365)
T cd03809 277 VFPSLYEGFGLPVLEAMACGT-----------------PVIASNISSLPEVAGDAALYFDPLDPEALAAAIERLLEDP-A 338 (365)
T ss_pred cccchhccCCCCHHHHhcCCC-----------------cEEecCCCCccceecCceeeeCCCCHHHHHHHHHHHhcCH-H
Confidence 999999999999999999976 899999988888774 689999999999999999998754 4
Q ss_pred HHHHHHHHHhhHHhhCCHHHHHHHHH
Q 004314 516 EKQLRHEKHYRYVSTHDVAYWARSFF 541 (761)
Q Consensus 516 er~~r~~~~~~~v~~~~~~~Wa~~~l 541 (761)
.+....++.++++.++++..++++++
T Consensus 339 ~~~~~~~~~~~~~~~~sw~~~~~~~~ 364 (365)
T cd03809 339 LREELRERGLARAKRFSWEKTARRTL 364 (365)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 56666667778889999999998875
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.2e-19 Score=194.05 Aligned_cols=277 Identities=20% Similarity=0.221 Sum_probs=191.9
Q ss_pred CEEEEeCCccch---HHHHHHH--hcCCCeEEEEEecCCCchhHHhcCcchHHHHH-HhhhcCEEeeeCHHHHHHHHHHH
Q 004314 202 DYVWIHDYHLMV---LPTFLRR--RFTRLRMGFFLHSPFPSSEIYRTLPVREEILK-ALLNADLIGFHTFDYARHFLSCC 275 (761)
Q Consensus 202 DiVwvhDyhl~l---lp~~lr~--~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~-~ll~~DligF~t~~~~~~Fl~~~ 275 (761)
|+|++|+.+-.. ....+.. +..+.++.+.+|.+.+.... .....+.+ -+-.+|.|-+.+.+.+++++...
T Consensus 78 dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~----~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~ 153 (366)
T cd03822 78 DVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHEPR----PGDRALLRLLLRRADAVIVMSSELLRALLLRA 153 (366)
T ss_pred CEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCccccc----hhhhHHHHHHHhcCCEEEEeeHHHHHHHHhhc
Confidence 899998733211 1111111 23678999999986222111 11122222 24468999888755555554210
Q ss_pred hhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHH
Q 004314 276 SRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKL 355 (761)
Q Consensus 276 ~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l 355 (761)
...++.++|+|+|...+..... .+. .....++.+++++||+.+.||+..++
T Consensus 154 ---------------------~~~~~~~i~~~~~~~~~~~~~~-------~~~-~~~~~~~~~i~~~G~~~~~K~~~~ll 204 (366)
T cd03822 154 ---------------------YPEKIAVIPHGVPDPPAEPPES-------LKA-LGGLDGRPVLLTFGLLRPYKGLELLL 204 (366)
T ss_pred ---------------------CCCcEEEeCCCCcCcccCCchh-------hHh-hcCCCCCeEEEEEeeccCCCCHHHHH
Confidence 0236788999999877653211 111 11225678999999999999999999
Q ss_pred HHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhccc
Q 004314 356 LAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAEC 435 (761)
Q Consensus 356 ~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv 435 (761)
+|++++.+++|+++ |+++|... +.....+.+..+++.+.+.. ..|.++++.++.+++..+|+.||+
T Consensus 205 ~a~~~~~~~~~~~~----l~i~G~~~----~~~~~~~~~~~~~i~~~~~~------~~v~~~~~~~~~~~~~~~~~~ad~ 270 (366)
T cd03822 205 EALPLLVAKHPDVR----LLVAGETH----PDLERYRGEAYALAERLGLA------DRVIFINRYLPDEELPELFSAADV 270 (366)
T ss_pred HHHHHHHhhCCCeE----EEEeccCc----cchhhhhhhhHhHHHhcCCC------CcEEEecCcCCHHHHHHHHhhcCE
Confidence 99999998888765 88777421 11111111111223333211 247777666999999999999999
Q ss_pred ceeccccc--CCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcccc-c--CcEEECCCCHHHHHHHHHHHH
Q 004314 436 VVVTAVRD--GMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL-S--GAIRVNPWNIEATAEAMHEAI 510 (761)
Q Consensus 436 ~vvtS~~E--GmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--~al~VnP~d~~~~A~ai~~aL 510 (761)
+++||..| |++++++|||+||. |+|+|+.+| .+.+ . .|+++++.|++++|++|..++
T Consensus 271 ~v~ps~~e~~~~~~~~~Ea~a~G~-----------------PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~ 332 (366)
T cd03822 271 VVLPYRSADQTQSGVLAYAIGFGK-----------------PVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLL 332 (366)
T ss_pred EEecccccccccchHHHHHHHcCC-----------------CEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHH
Confidence 99999999 99999999999986 899999888 6666 2 489999999999999999999
Q ss_pred cCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHHHH
Q 004314 511 QMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDM 544 (761)
Q Consensus 511 ~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l 544 (761)
+.++ ++..+.++.++++.++++..+++++.+.+
T Consensus 333 ~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 365 (366)
T cd03822 333 ADPE-LAQALRARAREYARAMSWERVAERYLRLL 365 (366)
T ss_pred cChH-HHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 9654 55666777889998999999999887654
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.3e-18 Score=196.73 Aligned_cols=346 Identities=14% Similarity=0.157 Sum_probs=203.3
Q ss_pred cccccccccccccCCCCCCCccChHhHHHHHHHHHHHHHHHHHH-hCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEE
Q 004314 153 KQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEV-INPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFL 231 (761)
Q Consensus 153 ~~~LWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~-~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~fl 231 (761)
+.-||-.|+--. |.....+++..-=+|.. ..|-..+.+. .....|++|.||++.......||++.+.++.+|+.
T Consensus 105 ~~~lW~~~~i~s---~~~~~d~nea~~fgy~~--~~~i~~~~~~~~~~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTt 179 (590)
T cd03793 105 KGELWELCGIGS---PEGDRETNDAIIFGFLV--AWFLGEFAEQFDDEPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTT 179 (590)
T ss_pred HHHHHHHcCCCC---CCCCCcchHHHHHHHHH--HHHHHHHHhhccCCCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEe
Confidence 345798888543 22223444433333421 1122222222 11235999999999999999999888999999999
Q ss_pred ecCCCchhHHhcCcc------------------------hHHHHH--HhhhcCEEeeeCHHHHHHHHHHHhhhcCceeec
Q 004314 232 HSPFPSSEIYRTLPV------------------------REEILK--ALLNADLIGFHTFDYARHFLSCCSRMLGLEYQS 285 (761)
Q Consensus 232 H~PfP~~e~fr~lp~------------------------r~~il~--~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~ 285 (761)
|-. ++-|.+-. .+--++ ....||.+...+..-++. |..
T Consensus 180 HAT----~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~aa~~Ad~fttVS~it~~E----~~~-------- 243 (590)
T cd03793 180 HAT----LLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAAAHCAHVFTTVSEITAYE----AEH-------- 243 (590)
T ss_pred ccc----ccccccccCCcccchhhhhcchhhhhhcccchHHHHHHHHHHhhCCEEEECChHHHHH----HHH--------
Confidence 954 33332110 000011 112233333222211111 111
Q ss_pred cCceeEEEEcCeEEEEEEeccccCcccchhhhccc----hHHHHHH-----HHHHHc---CCCeEEEe-ecCccc-cCCh
Q 004314 286 KRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLA----DKDWRVQ-----ELKQQF---EGKTVLLG-VDDMDI-FKGV 351 (761)
Q Consensus 286 ~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~----~~~~~~~-----~lr~~~---~~~~vil~-VdRld~-~KGi 351 (761)
..++...+ |+|+|||++.|.+...-. ...+++. .++.+| .+++++++ +||+++ .||+
T Consensus 244 --------Ll~~~pd~-ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~tli~f~~GR~e~~nKGi 314 (590)
T cd03793 244 --------LLKRKPDV-VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFDLDKTLYFFTAGRYEFSNKGA 314 (590)
T ss_pred --------HhCCCCCE-EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCCCCCeEEEEEeeccccccCCH
Confidence 22333233 899999999987542110 1111222 234444 36788888 799999 9999
Q ss_pred HHHHHHHHHHHHhCCCC-cCceeEEEEecCCCCCc---------hhHHHHHHHHHHHHHHHhcc---------c------
Q 004314 352 DLKLLAMEHLLKQHPKW-QGRAVLVQIANPARGRG---------KDLEEIQAEIHATCKRINET---------F------ 406 (761)
Q Consensus 352 ~~~l~A~~~ll~~~P~~-~~~vvLvqi~~p~r~~~---------~~~~~l~~ev~~lv~~in~~---------~------ 406 (761)
+.+|+|+.+|-..-..- .+..|+..+..|+...+ .-.+++++.+.++..+|+.+ .
T Consensus 315 DvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~ 394 (590)
T cd03793 315 DMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEEL 394 (590)
T ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhh
Confidence 99999999875421111 11223334445664331 22345566666665555554 1
Q ss_pred -----------------------------------------------CC-CCCccEEEEcCCCC------HHHHHHHHHh
Q 004314 407 -----------------------------------------------GR-PGYEPVVFIDKPVT------LSERAAYYTI 432 (761)
Q Consensus 407 -----------------------------------------------g~-~~~~pV~~~~~~v~------~~el~aly~~ 432 (761)
.. .+-..|+|....++ ..+...+|+.
T Consensus 395 ~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g 474 (590)
T cd03793 395 LDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRG 474 (590)
T ss_pred cchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhh
Confidence 00 12223454433332 2358889999
Q ss_pred cccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCc----cccc----CcEEEC-------CC
Q 004314 433 AECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCS----PSLS----GAIRVN-------PW 497 (761)
Q Consensus 433 ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~----~~l~----~al~Vn-------P~ 497 (761)
||++|+||.+||||++++||||||. |+|+|..+|.. +.+. .|+.|. +.
T Consensus 475 ~dl~v~PS~yE~fG~~~lEAma~G~-----------------PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e 537 (590)
T cd03793 475 CHLGVFPSYYEPWGYTPAECTVMGI-----------------PSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDE 537 (590)
T ss_pred ceEEEeccccCCCCcHHHHHHHcCC-----------------CEEEccCcchhhhhHHHhccCCCceEEEecCCccchHH
Confidence 9999999999999999999999976 99999999883 4432 378887 56
Q ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHHHHH
Q 004314 498 NIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDME 545 (761)
Q Consensus 498 d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l~ 545 (761)
+++++|++|.+.++++..++........+....+++.+-+..|++.-.
T Consensus 538 ~v~~La~~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~ 585 (590)
T cd03793 538 SVQQLTQYMYEFCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQ 585 (590)
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 678899999998877644333333333466667888777777766543
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.4e-19 Score=191.30 Aligned_cols=264 Identities=17% Similarity=0.158 Sum_probs=190.5
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcC
Q 004314 201 DDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLG 280 (761)
Q Consensus 201 ~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg 280 (761)
.|+|++|..+...+..++..+....+..+.+|.+-.... +....+-+.+..+|.+...+....+.+.+. .+
T Consensus 80 ~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~vi~~s~~~~~~l~~~----~~ 150 (355)
T cd03799 80 IDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRS-----PDAIDLDEKLARADFVVAISEYNRQQLIRL----LG 150 (355)
T ss_pred CCEEEECCCCchHHHHHHHHHhcCCCEEEEEeccccccc-----CchHHHHHHHhhCCEEEECCHHHHHHHHHh----cC
Confidence 389999987665555666665557888888885422111 111223344567999999988777766431 11
Q ss_pred ceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHHHHHHH
Q 004314 281 LEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEH 360 (761)
Q Consensus 281 ~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ 360 (761)
....++.++|+|+|.+.|.+.. .....++..|+++||+.+.||+..+++|+++
T Consensus 151 ---------------~~~~~~~vi~~~~d~~~~~~~~------------~~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~ 203 (355)
T cd03799 151 ---------------CDPDKIHVVHCGVDLERFPPRP------------PPPPGEPLRILSVGRLVEKKGLDYLLEALAL 203 (355)
T ss_pred ---------------CCcccEEEEeCCcCHHHcCCcc------------ccccCCCeEEEEEeeeccccCHHHHHHHHHH
Confidence 1234678899999988775421 0112456789999999999999999999999
Q ss_pred HHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecc
Q 004314 361 LLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTA 440 (761)
Q Consensus 361 ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS 440 (761)
+.+++|+++ |+++|. ++.. .++.+.+++.+ ..+.+.+.+.++.+++.++|+.||++++||
T Consensus 204 l~~~~~~~~----l~i~G~-----~~~~----~~~~~~~~~~~-------~~~~v~~~g~~~~~~l~~~~~~adi~l~~s 263 (355)
T cd03799 204 LKDRGIDFR----LDIVGD-----GPLR----DELEALIAELG-------LEDRVTLLGAKSQEEVRELLRAADLFVLPS 263 (355)
T ss_pred HhhcCCCeE----EEEEEC-----CccH----HHHHHHHHHcC-------CCCeEEECCcCChHHHHHHHHhCCEEEecc
Confidence 987766654 877773 3332 23444444433 123344567899999999999999999999
Q ss_pred cc------cCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCHHHHHHHHHHHHc
Q 004314 441 VR------DGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAIQ 511 (761)
Q Consensus 441 ~~------EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~ 511 (761)
.. ||||++.+|||+||. |+|+|..+|..+.+. .|++++|.|++++|++|.++++
T Consensus 264 ~~~~~~~~e~~~~~~~Ea~a~G~-----------------Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~~~~ 326 (355)
T cd03799 264 VTAADGDREGLPVVLMEAMAMGL-----------------PVISTDVSGIPELVEDGETGLLVPPGDPEALADAIERLLD 326 (355)
T ss_pred eecCCCCccCccHHHHHHHHcCC-----------------CEEecCCCCcchhhhCCCceEEeCCCCHHHHHHHHHHHHh
Confidence 99 999999999999976 899999888777773 4899999999999999999999
Q ss_pred CCHHHHHHHHHHHhhHHh-hCCHHHHHH
Q 004314 512 MNEAEKQLRHEKHYRYVS-THDVAYWAR 538 (761)
Q Consensus 512 m~~~er~~r~~~~~~~v~-~~~~~~Wa~ 538 (761)
+++ ++..+.+..++++. .+++...++
T Consensus 327 ~~~-~~~~~~~~a~~~~~~~~s~~~~~~ 353 (355)
T cd03799 327 DPE-LRREMGEAGRARVEEEFDIRKQAA 353 (355)
T ss_pred CHH-HHHHHHHHHHHHHHHhcCHHHHhh
Confidence 764 45555666777775 466665554
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.84 E-value=6e-19 Score=191.11 Aligned_cols=274 Identities=16% Similarity=0.226 Sum_probs=184.1
Q ss_pred CCEEEEeCCcc-chHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHH------HHHhhhcCEEeeeCHHHHHHHHH
Q 004314 201 DDYVWIHDYHL-MVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEI------LKALLNADLIGFHTFDYARHFLS 273 (761)
Q Consensus 201 ~DiVwvhDyhl-~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~i------l~~ll~~DligF~t~~~~~~Fl~ 273 (761)
.|+|++|+... ...+.....+..+.++.++.|..++..... .-+.+..+ -..+..+|.+.+.+.........
T Consensus 88 ~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~ 166 (375)
T cd03821 88 ADIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWALP-HKALKKRLAWFLFERRLLQAAAAVHATSEQEAAEIRR 166 (375)
T ss_pred CCEEEEecccchHHHHHHHHHHHhCCCEEEEccccccccccc-cchhhhHHHHHHHHHHHHhcCCEEEECCHHHHHHHHh
Confidence 48999998432 222222222235788999999776543210 00111111 11133466776666443332211
Q ss_pred HHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc---CCCeEEEeecCccccCC
Q 004314 274 CCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIFKG 350 (761)
Q Consensus 274 ~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KG 350 (761)
.+...++.++|+|+|.+.+..... .. . ++.+ .++++++++||+++.||
T Consensus 167 ---------------------~~~~~~~~vi~~~~~~~~~~~~~~---~~----~-~~~~~~~~~~~~i~~~G~~~~~K~ 217 (375)
T cd03821 167 ---------------------LGLKAPIAVIPNGVDIPPFAALPS---RG----R-RRKFPILPDKRIILFLGRLHPKKG 217 (375)
T ss_pred ---------------------hCCcccEEEcCCCcChhccCcchh---hh----h-hhhccCCCCCcEEEEEeCcchhcC
Confidence 112346789999999988864311 10 1 3333 46789999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHH
Q 004314 351 VDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYY 430 (761)
Q Consensus 351 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly 430 (761)
+..+++|+.++.+++|+++ |+++|... ..+ ...++.++.+.+. . ..|. +.+.++.+++..+|
T Consensus 218 ~~~li~a~~~l~~~~~~~~----l~i~G~~~----~~~---~~~~~~~~~~~~~----~--~~v~-~~g~~~~~~~~~~~ 279 (375)
T cd03821 218 LDLLIEAFAKLAERFPDWH----LVIAGPDE----GGY---RAELKQIAAALGL----E--DRVT-FTGMLYGEDKAAAL 279 (375)
T ss_pred HHHHHHHHHHhhhhcCCeE----EEEECCCC----cch---HHHHHHHHHhcCc----c--ceEE-EcCCCChHHHHHHH
Confidence 9999999999998888765 88777421 112 2223333333321 1 1355 45789999999999
Q ss_pred HhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc-C-cEEECCCCHHHHHHHHHH
Q 004314 431 TIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-G-AIRVNPWNIEATAEAMHE 508 (761)
Q Consensus 431 ~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~-al~VnP~d~~~~A~ai~~ 508 (761)
+.||++++||..||||++++|||+||. |+|+|+.+|..+.+. + +++++ .+.++++++|.+
T Consensus 280 ~~adv~v~ps~~e~~~~~~~Eama~G~-----------------PvI~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~ 341 (375)
T cd03821 280 ADADLFVLPSHSENFGIVVAEALACGT-----------------PVVTTDKVPWQELIEYGCGWVVD-DDVDALAAALRR 341 (375)
T ss_pred hhCCEEEeccccCCCCcHHHHHHhcCC-----------------CEEEcCCCCHHHHhhcCceEEeC-CChHHHHHHHHH
Confidence 999999999999999999999999976 999999999888774 3 55554 566999999999
Q ss_pred HHcCCHHHHHHHHHHHhhH-HhhCCHHHHHHHHH
Q 004314 509 AIQMNEAEKQLRHEKHYRY-VSTHDVAYWARSFF 541 (761)
Q Consensus 509 aL~m~~~er~~r~~~~~~~-v~~~~~~~Wa~~~l 541 (761)
+++++ ++++...++.+++ .+.+++..-++.++
T Consensus 342 l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 342 ALELP-QRLKAMGENGRALVEERFSWTAIAQQLL 374 (375)
T ss_pred HHhCH-HHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 99987 5667777777887 46677777777654
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.5e-19 Score=189.60 Aligned_cols=280 Identities=16% Similarity=0.170 Sum_probs=193.4
Q ss_pred HHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHh-hhcCEEeeeCHHHHHHHHH
Q 004314 195 EVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKAL-LNADLIGFHTFDYARHFLS 273 (761)
Q Consensus 195 ~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~l-l~~DligF~t~~~~~~Fl~ 273 (761)
+..+| |+|++|+++.......+.......++.+..|..++...- ...+....+.+-+ -.+|.+...+......+..
T Consensus 77 ~~~~~--div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~ 153 (365)
T cd03807 77 RRLRP--DVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLGK-KSTRLVARLRRLLSSFIPLIVANSAAAAEYHQA 153 (365)
T ss_pred HhhCC--CEEEeccccccHHHHHHHHhcCCCcEEEEecCCcccccc-hhHhHHHHHHHHhccccCeEEeccHHHHHHHHH
Confidence 33455 899999999877776666654678899999976654210 0001111122222 2456665555544433322
Q ss_pred HHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc---CCCeEEEeecCccccCC
Q 004314 274 CCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIFKG 350 (761)
Q Consensus 274 ~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KG 350 (761)
. +. ...++.++|+|+|...+.+... ....+++++ .++.+++++||+++.||
T Consensus 154 ----~-~~---------------~~~~~~vi~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~G~~~~~K~ 207 (365)
T cd03807 154 ----I-GY---------------PPKKIVVIPNGVDTERFSPDLD------ARARLREELGLPEDTFLIGIVARLHPQKD 207 (365)
T ss_pred ----c-CC---------------ChhheeEeCCCcCHHhcCCccc------chHHHHHhcCCCCCCeEEEEecccchhcC
Confidence 0 11 1235678999999987764321 112233444 46788999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHH-HHhcccCCCCCccEEEEcCCCCHHHHHHH
Q 004314 351 VDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCK-RINETFGRPGYEPVVFIDKPVTLSERAAY 429 (761)
Q Consensus 351 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~-~in~~~g~~~~~pV~~~~~~v~~~el~al 429 (761)
+..+++|+..+.+++|+++ |+++|.. +.....+ .... ..+ .. ..|.+++ +.+++..+
T Consensus 208 ~~~li~a~~~l~~~~~~~~----l~i~G~~-----~~~~~~~----~~~~~~~~----~~--~~v~~~g---~~~~~~~~ 265 (365)
T cd03807 208 HATLLRAAALLLKKFPNAR----LLLVGDG-----PDRANLE----LLALKELG----LE--DKVILLG---ERSDVPAL 265 (365)
T ss_pred HHHHHHHHHHHHHhCCCeE----EEEecCC-----cchhHHH----HHHHHhcC----CC--ceEEEcc---ccccHHHH
Confidence 9999999999988887765 8877742 2222222 2222 222 11 1355543 35689999
Q ss_pred HHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc-CcEEECCCCHHHHHHHHHH
Q 004314 430 YTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-GAIRVNPWNIEATAEAMHE 508 (761)
Q Consensus 430 y~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~al~VnP~d~~~~A~ai~~ 508 (761)
|+.||++++||..||+|++++|||+||. |+|+|+.+|..+.+. .|+.+++.|+++++++|.+
T Consensus 266 ~~~adi~v~ps~~e~~~~~~~Ea~a~g~-----------------PvI~~~~~~~~e~~~~~g~~~~~~~~~~l~~~i~~ 328 (365)
T cd03807 266 LNALDVFVLSSLSEGFPNVLLEAMACGL-----------------PVVATDVGDNAELVGDTGFLVPPGDPEALAEAIEA 328 (365)
T ss_pred HHhCCEEEeCCccccCCcHHHHHHhcCC-----------------CEEEcCCCChHHHhhcCCEEeCCCCHHHHHHHHHH
Confidence 9999999999999999999999999976 899999999888885 5899999999999999999
Q ss_pred HHcCCHHHHHHHHHHHhhHHhh-CCHHHHHHHHHHH
Q 004314 509 AIQMNEAEKQLRHEKHYRYVST-HDVAYWARSFFQD 543 (761)
Q Consensus 509 aL~m~~~er~~r~~~~~~~v~~-~~~~~Wa~~~l~~ 543 (761)
+++++ +++....+++++++.+ +++..-++.|.+-
T Consensus 329 l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 363 (365)
T cd03807 329 LLADP-ALRQALGEAARERIEENFSIEAMVEAYEEL 363 (365)
T ss_pred HHhCh-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 99987 4566666777888754 7888888877654
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.84 E-value=9.6e-19 Score=200.72 Aligned_cols=271 Identities=14% Similarity=0.081 Sum_probs=183.3
Q ss_pred CCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCch-hHHhcC----cchHHHHHHhhhcCEEeeeCHHHHHHHHHH
Q 004314 200 EDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSS-EIYRTL----PVREEILKALLNADLIGFHTFDYARHFLSC 274 (761)
Q Consensus 200 ~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~-e~fr~l----p~r~~il~~ll~~DligF~t~~~~~~Fl~~ 274 (761)
+.|+++++-.+... +. +.+..+.++++.++|.-.-+. ..-... +.-+..++.+-.+|.|...|..-.+.....
T Consensus 211 ~~di~i~dr~~~~~-~~-~~~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~~~~~~D~iI~~S~~~~~~l~~~ 288 (500)
T TIGR02918 211 KKDIIILDRSTGIG-QA-VLENKGPAKLGVVVHAEHFSESATNETYILWNNYYEYQFSNADYIDFFITATDIQNQILKNQ 288 (500)
T ss_pred CCCEEEEcCCcccc-hH-HHhcCCCceEEEEEChhhhcCccCcchhHHHHHHHHHHHhchhhCCEEEECCHHHHHHHHHH
Confidence 45899887655443 33 335567899999999642100 000000 111223344455688877776544443321
Q ss_pred HhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHH
Q 004314 275 CSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLK 354 (761)
Q Consensus 275 ~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~ 354 (761)
... +.+...+|.++|+|++...+.+. ....+..|++|||+.+.||+..+
T Consensus 289 ~~~----------------~~~~~~ki~viP~g~~~~~~~~~---------------~~r~~~~il~vGrl~~~Kg~~~l 337 (500)
T TIGR02918 289 FKK----------------YYNIEPRIYTIPVGSLDELQYPE---------------QERKPFSIITASRLAKEKHIDWL 337 (500)
T ss_pred hhh----------------hcCCCCcEEEEcCCCcccccCcc---------------cccCCeEEEEEeccccccCHHHH
Confidence 111 11223467889999875443210 01234689999999999999999
Q ss_pred HHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcc
Q 004314 355 LLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAE 434 (761)
Q Consensus 355 l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~AD 434 (761)
++|+.++.+++|+++ |+++|. |++. +++++++++.+.. ..|.+. |+. ++..+|+.||
T Consensus 338 i~A~~~l~~~~p~~~----l~i~G~-----G~~~----~~l~~~i~~~~l~------~~V~f~-G~~---~~~~~~~~ad 394 (500)
T TIGR02918 338 VKAVVKAKKSVPELT----FDIYGE-----GGEK----QKLQKIINENQAQ------DYIHLK-GHR---NLSEVYKDYE 394 (500)
T ss_pred HHHHHHHHhhCCCeE----EEEEEC-----chhH----HHHHHHHHHcCCC------CeEEEc-CCC---CHHHHHHhCC
Confidence 999999999999866 888873 4443 4555666554321 136554 443 6888999999
Q ss_pred cceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCC-CCccccc---CcEEECC----CC----HHHH
Q 004314 435 CVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFI-GCSPSLS---GAIRVNP----WN----IEAT 502 (761)
Q Consensus 435 v~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~-G~~~~l~---~al~VnP----~d----~~~~ 502 (761)
++|+||..||||++++||||||. |+|+|... |..+.+. +|++|++ .| ++++
T Consensus 395 v~v~pS~~Egfgl~~lEAma~G~-----------------PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~~~~~~~l 457 (500)
T TIGR02918 395 LYLSASTSEGFGLTLMEAVGSGL-----------------GMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDEDQIITAL 457 (500)
T ss_pred EEEEcCccccccHHHHHHHHhCC-----------------CEEEecCCCCCHHHccCCCCEEEEeCCccccchhHHHHHH
Confidence 99999999999999999999976 99999986 6777773 4899974 34 8899
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHHHHH
Q 004314 503 AEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDME 545 (761)
Q Consensus 503 A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l~ 545 (761)
|++|.++|+ +++++.+.++.++.+++++...-++++.+-++
T Consensus 458 a~~I~~ll~--~~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~ 498 (500)
T TIGR02918 458 AEKIVEYFN--SNDIDAFHEYSYQIAEGFLTANIIEKWKKLVR 498 (500)
T ss_pred HHHHHHHhC--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 999999994 44566667778888888888777777665554
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.2e-18 Score=196.07 Aligned_cols=272 Identities=14% Similarity=0.104 Sum_probs=190.6
Q ss_pred CCCCCEEEEeCCccc-hHHHHHHHhcCCCeEEEEEecC--CCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHH
Q 004314 198 NPEDDYVWIHDYHLM-VLPTFLRRRFTRLRMGFFLHSP--FPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSC 274 (761)
Q Consensus 198 ~~~~DiVwvhDyhl~-llp~~lr~~~~~~~ig~flH~P--fP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~ 274 (761)
+++.|+++.|-++.. ..-.+++++....++....|-. ++.......++.++.+ +-.+|.|.+.+....+.+...
T Consensus 125 ~~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~~~~~~~~~~~~~~~---~~~~d~ii~~S~~~~~~l~~~ 201 (407)
T cd04946 125 DGQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYEDRYPSGYIPLRRYL---LSSLDAVFPCSEQGRNYLQKR 201 (407)
T ss_pred ccCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhhhhccccchHHHHHH---HhcCCEEEECCHHHHHHHHHH
Confidence 344567777655543 3334566666666688888853 2111111112222222 347899999888766654321
Q ss_pred HhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHH
Q 004314 275 CSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLK 354 (761)
Q Consensus 275 ~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~ 354 (761)
.+ ....++.++|+|++...+.+.. ...++..++++||+.+.||+..+
T Consensus 202 ----~~---------------~~~~ki~vi~~gv~~~~~~~~~--------------~~~~~~~il~~Grl~~~Kg~~~l 248 (407)
T cd04946 202 ----YP---------------AYKEKIKVSYLGVSDPGIISKP--------------SKDDTLRIVSCSYLVPVKRVDLI 248 (407)
T ss_pred ----CC---------------CccccEEEEECCcccccccCCC--------------CCCCCEEEEEeeccccccCHHHH
Confidence 12 1223667899999987664310 11456789999999999999999
Q ss_pred HHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHh--
Q 004314 355 LLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTI-- 432 (761)
Q Consensus 355 l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~-- 432 (761)
++|+.++.+++|+.. +.++.+|. |++.. ++++++++.+ . -..|. +.|.++.+++.++|+.
T Consensus 249 i~a~~~l~~~~p~~~--l~~~iiG~-----g~~~~----~l~~~~~~~~----~--~~~V~-f~G~v~~~e~~~~~~~~~ 310 (407)
T cd04946 249 IKALAALAKARPSIK--IKWTHIGG-----GPLED----TLKELAESKP----E--NISVN-FTGELSNSEVYKLYKENP 310 (407)
T ss_pred HHHHHHHHHhCCCce--EEEEEEeC-----chHHH----HHHHHHHhcC----C--CceEE-EecCCChHHHHHHHhhcC
Confidence 999999999988764 66777763 44433 3444443221 1 11355 4579999999999986
Q ss_pred cccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECC-CCHHHHHHHHHH
Q 004314 433 AECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNP-WNIEATAEAMHE 508 (761)
Q Consensus 433 ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP-~d~~~~A~ai~~ 508 (761)
||+++.||..|||+++++|||+||. |+|+|..+|..+.+. .|++++| .|++++|++|.+
T Consensus 311 ~~v~v~~S~~Eg~p~~llEAma~G~-----------------PVIas~vgg~~e~i~~~~~G~l~~~~~~~~~la~~I~~ 373 (407)
T cd04946 311 VDVFVNLSESEGLPVSIMEAMSFGI-----------------PVIATNVGGTPEIVDNGGNGLLLSKDPTPNELVSSLSK 373 (407)
T ss_pred CCEEEeCCccccccHHHHHHHHcCC-----------------CEEeCCCCCcHHHhcCCCcEEEeCCCCCHHHHHHHHHH
Confidence 6789999999999999999999986 999999999998884 3688876 489999999999
Q ss_pred HHcCCHHHHHHHHHHHhhHHh-hCCHHHHHHHHH
Q 004314 509 AIQMNEAEKQLRHEKHYRYVS-THDVAYWARSFF 541 (761)
Q Consensus 509 aL~m~~~er~~r~~~~~~~v~-~~~~~~Wa~~~l 541 (761)
+++.+ +++..+.++.++++. ++++..+.++|+
T Consensus 374 ll~~~-~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 374 FIDNE-EEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHhCH-HHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 99854 566777777888885 578888887775
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.2e-19 Score=201.54 Aligned_cols=187 Identities=13% Similarity=0.035 Sum_probs=129.5
Q ss_pred EEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecC-c-cccCChHHHHHHHHHHHHhCCCCcCceeEEE
Q 004314 299 VGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDD-M-DIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQ 376 (761)
Q Consensus 299 ~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdR-l-d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 376 (761)
.++.++|+|||++.+...... ...+ .-+++++|++|+| + ++.||+..+++|+.++ .++ +.|++
T Consensus 212 ~~i~vI~NGid~~~~~~~~~~-------~~~~-~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l---~~~----~~L~i 276 (405)
T PRK10125 212 GRCRIINNGIDMATEAILAEL-------PPVR-ETQGKPKIAVVAHDLRYDGKTDQQLVREMMAL---GDK----IELHT 276 (405)
T ss_pred CCEEEeCCCcCcccccccccc-------cccc-cCCCCCEEEEEEeccccCCccHHHHHHHHHhC---CCC----eEEEE
Confidence 368889999997543221100 0001 1246788999999 4 4789999999999875 233 55888
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeee
Q 004314 377 IANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCR 456 (761)
Q Consensus 377 i~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~ 456 (761)
+|.. +... . ..|.+++...+.+++..+|+.||+||+||..|||++|++||||||
T Consensus 277 vG~g-----~~~~-------------~--------~~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G 330 (405)
T PRK10125 277 FGKF-----SPFT-------------A--------GNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIG 330 (405)
T ss_pred EcCC-----Cccc-------------c--------cceEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHcC
Confidence 8742 1100 0 125555433467899999999999999999999999999999998
Q ss_pred cCCCCCCCCCCCCCCCCceEEEcCCCCCccccc--CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHH-hhCCH
Q 004314 457 QGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS--GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYV-STHDV 533 (761)
Q Consensus 457 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~ 533 (761)
. |||+|+.+|+.+.+. +|++|+|.|++++|+++...+... +.....++.++.+ +.++.
T Consensus 331 ~-----------------PVVat~~gG~~Eiv~~~~G~lv~~~d~~~La~~~~~~~~~~--~~~~~~~~~r~~~~~~fs~ 391 (405)
T PRK10125 331 V-----------------PVIATHSDAAREVLQKSGGKTVSEEEVLQLAQLSKPEIAQA--VFGTTLAEFSQRSRAAYSG 391 (405)
T ss_pred C-----------------CEEEeCCCChHHhEeCCcEEEECCCCHHHHHhccCHHHHHH--hhhhHHHHHHHHHHHhCCH
Confidence 6 999999999988774 599999999999998654322210 0000123344444 56888
Q ss_pred HHHHHHHHHHHH
Q 004314 534 AYWARSFFQDME 545 (761)
Q Consensus 534 ~~Wa~~~l~~l~ 545 (761)
...++++++-.+
T Consensus 392 ~~~~~~y~~lY~ 403 (405)
T PRK10125 392 QQMLEEYVNFYQ 403 (405)
T ss_pred HHHHHHHHHHHH
Confidence 888888876543
|
|
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.5e-18 Score=186.30 Aligned_cols=283 Identities=21% Similarity=0.189 Sum_probs=201.9
Q ss_pred HHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHh----cCcchHHHHHHhhhcCEEeeeCHHHH
Q 004314 193 VIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYR----TLPVREEILKALLNADLIGFHTFDYA 268 (761)
Q Consensus 193 i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr----~lp~r~~il~~ll~~DligF~t~~~~ 268 (761)
+.+..++ |+|++|+++...+.. +..+.++.++.+.+|.+++...... ...........+..+|.+.+.+....
T Consensus 80 ~~~~~~~--Dii~~~~~~~~~~~~-~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~ 156 (374)
T cd03801 80 LLRRERF--DVVHAHDWLALLAAA-LAARLLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATR 156 (374)
T ss_pred HhhhcCC--cEEEEechhHHHHHH-HHHHhcCCcEEEEeccchhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHHH
Confidence 3344354 899999999887665 4445678999999999887542110 00111122233456799888888776
Q ss_pred HHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc---CCCeEEEeecCc
Q 004314 269 RHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDM 345 (761)
Q Consensus 269 ~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRl 345 (761)
+.+.+.. .....++.++|+|+|...+.... ...+... .+++.++++||+
T Consensus 157 ~~~~~~~-------------------~~~~~~~~~i~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~i~~~g~~ 208 (374)
T cd03801 157 EELRELG-------------------GVPPEKITVIPNGVDTERFRPAP---------RAARRRLGIPEDEPVILFVGRL 208 (374)
T ss_pred HHHHhcC-------------------CCCCCcEEEecCcccccccCccc---------hHHHhhcCCcCCCeEEEEecch
Confidence 6654310 01124678899999998875421 1111112 467889999999
Q ss_pred cccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHH
Q 004314 346 DIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSE 425 (761)
Q Consensus 346 d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~e 425 (761)
++.||+..+++|+..+.+++|+++ |+++|. ++.... +.+++.+.+.. ..|.+ .+.++.++
T Consensus 209 ~~~k~~~~~i~~~~~~~~~~~~~~----l~i~G~-----~~~~~~----~~~~~~~~~~~------~~v~~-~g~~~~~~ 268 (374)
T cd03801 209 VPRKGVDLLLEALAKLRKEYPDVR----LVIVGD-----GPLREE----LEALAAELGLG------DRVTF-LGFVPDED 268 (374)
T ss_pred hhhcCHHHHHHHHHHHhhhcCCeE----EEEEeC-----cHHHHH----HHHHHHHhCCC------cceEE-EeccChhh
Confidence 999999999999999988877654 887772 333333 33333333211 23554 56899999
Q ss_pred HHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCHHHH
Q 004314 426 RAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEAT 502 (761)
Q Consensus 426 l~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~ 502 (761)
+..+|+.||++++|+..||++++++|||+||. |+|+|..+|..+.+. .|+++++.|++++
T Consensus 269 ~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g~-----------------pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l 331 (374)
T cd03801 269 LPALYAAADVFVLPSLYEGFGLVLLEAMAAGL-----------------PVVASDVGGIPEVVEDGETGLLVPPGDPEAL 331 (374)
T ss_pred HHHHHHhcCEEEecchhccccchHHHHHHcCC-----------------cEEEeCCCChhHHhcCCcceEEeCCCCHHHH
Confidence 99999999999999999999999999999976 899999988888884 4899999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHh-hHHhhCCHHHHHHHHHHHH
Q 004314 503 AEAMHEAIQMNEAEKQLRHEKHY-RYVSTHDVAYWARSFFQDM 544 (761)
Q Consensus 503 A~ai~~aL~m~~~er~~r~~~~~-~~v~~~~~~~Wa~~~l~~l 544 (761)
+++|.++++.++ .++...++.+ ...+.+++..+++.+++-+
T Consensus 332 ~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (374)
T cd03801 332 AEAILRLLDDPE-LRRRLGEAARERVAERFSWDRVAARTEEVY 373 (374)
T ss_pred HHHHHHHHcChH-HHHHHHHHHHHHHHHhcCHHHHHHHHHHhh
Confidence 999999998764 4445555555 4556789999998877643
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.1e-18 Score=189.31 Aligned_cols=267 Identities=19% Similarity=0.246 Sum_probs=186.3
Q ss_pred HHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchH---------HHH-HHhhhcCEEeee
Q 004314 194 IEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVRE---------EIL-KALLNADLIGFH 263 (761)
Q Consensus 194 ~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~---------~il-~~ll~~DligF~ 263 (761)
.+..+| |+|++|+...+........+..++++.+.+|.+|+.. ....+... .+. ..+..+|.+.+.
T Consensus 80 ~~~~~~--Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~ 155 (374)
T cd03817 80 LKELGP--DIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYEDY--THYVPLGRLLARAVVRRKLSRRFYNRCDAVIAP 155 (374)
T ss_pred HhhcCC--CEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHHHH--HHHHhcccchhHHHHHHHHHHHHhhhCCEEEec
Confidence 344455 8999998755543333333345789999999887632 22222111 111 223468888887
Q ss_pred CHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc---CCCeEEE
Q 004314 264 TFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLL 340 (761)
Q Consensus 264 t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil 340 (761)
+......+.. .+ ...++.++|+|+|...+.+... .. .++.+ .++++|+
T Consensus 156 s~~~~~~~~~-----~~----------------~~~~~~vi~~~~~~~~~~~~~~----~~----~~~~~~~~~~~~~i~ 206 (374)
T cd03817 156 SEKIADLLRE-----YG----------------VKRPIEVIPTGIDLDRFEPVDG----DD----ERRKLGIPEDEPVLL 206 (374)
T ss_pred cHHHHHHHHh-----cC----------------CCCceEEcCCccchhccCccch----hH----HHHhcCCCCCCeEEE
Confidence 7765444321 11 1124788999999988764321 11 12233 4678899
Q ss_pred eecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCC
Q 004314 341 GVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKP 420 (761)
Q Consensus 341 ~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~ 420 (761)
++||+.+.||+..+++|++++.++.|+++ |+++|. ++.. .++.+++++.+.. ..|. +.+.
T Consensus 207 ~~G~~~~~k~~~~l~~~~~~~~~~~~~~~----l~i~G~-----~~~~----~~~~~~~~~~~~~------~~v~-~~g~ 266 (374)
T cd03817 207 YVGRLAKEKNIDFLIRAFARLLKEEPDVK----LVIVGD-----GPER----EELEELARELGLA------DRVI-FTGF 266 (374)
T ss_pred EEeeeecccCHHHHHHHHHHHHHhCCCeE----EEEEeC-----CchH----HHHHHHHHHcCCC------CcEE-Eecc
Confidence 99999999999999999999988766654 887773 3322 3344444443311 1355 4578
Q ss_pred CCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCC
Q 004314 421 VTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPW 497 (761)
Q Consensus 421 v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~ 497 (761)
++.+++..+|+.||++++||..||+|++.+|||+||. |+|+|..+|..+.+. +|+++++.
T Consensus 267 ~~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g~-----------------PvI~~~~~~~~~~i~~~~~g~~~~~~ 329 (374)
T cd03817 267 VPREELPDYYKAADLFVFASTTETQGLVLLEAMAAGL-----------------PVVAVDAPGLPDLVADGENGFLFPPG 329 (374)
T ss_pred CChHHHHHHHHHcCEEEecccccCcChHHHHHHHcCC-----------------cEEEeCCCChhhheecCceeEEeCCC
Confidence 9999999999999999999999999999999999976 899999988888774 48999998
Q ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCC
Q 004314 498 NIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHD 532 (761)
Q Consensus 498 d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~ 532 (761)
|. +++++|.+++++++ .++.+.++.++++.+++
T Consensus 330 ~~-~~~~~i~~l~~~~~-~~~~~~~~~~~~~~~~~ 362 (374)
T cd03817 330 DE-ALAEALLRLLQDPE-LRRRLSKNAEESAEKFS 362 (374)
T ss_pred CH-HHHHHHHHHHhChH-HHHHHHHHHHHHHHHHH
Confidence 88 99999999999875 34556666777777765
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.6e-18 Score=188.53 Aligned_cols=275 Identities=19% Similarity=0.214 Sum_probs=195.6
Q ss_pred CCEEEEeC-CccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcC-c-------chHHHH-HHhhhcCEEeeeCHHHHHH
Q 004314 201 DDYVWIHD-YHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTL-P-------VREEIL-KALLNADLIGFHTFDYARH 270 (761)
Q Consensus 201 ~DiVwvhD-yhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~l-p-------~r~~il-~~ll~~DligF~t~~~~~~ 270 (761)
-|+|++|. ..+..++....++..+.++.+.+|..||........ . ....+. ..+..+|.+-+.+...++.
T Consensus 100 ~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~~~~ 179 (394)
T cd03794 100 PDVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISPGMREY 179 (394)
T ss_pred CCEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcCCEEEEECHHHHHH
Confidence 38999998 444455555555555889999999988754321111 1 111122 2245689999999888777
Q ss_pred HHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCC
Q 004314 271 FLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKG 350 (761)
Q Consensus 271 Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KG 350 (761)
|.. .+ ....++.++|+|+|...+.+.... ...... ....++.+++++||+...||
T Consensus 180 ~~~-----~~---------------~~~~~~~~i~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~i~~~G~~~~~k~ 234 (394)
T cd03794 180 LVR-----RG---------------VPPEKISVIPNGVDLELFKPPPAD----ESLRKE-LGLDDKFVVLYAGNIGRAQG 234 (394)
T ss_pred HHh-----cC---------------CCcCceEEcCCCCCHHHcCCccch----hhhhhc-cCCCCcEEEEEecCcccccC
Confidence 641 11 122367889999998877643211 101111 11257789999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHH
Q 004314 351 VDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYY 430 (761)
Q Consensus 351 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly 430 (761)
+..+++|+.++.+. |+++ |+++|. ++....+++ ++... +...|.+++ .++.+++.++|
T Consensus 235 ~~~l~~~~~~l~~~-~~~~----l~i~G~-----~~~~~~~~~----~~~~~-------~~~~v~~~g-~~~~~~~~~~~ 292 (394)
T cd03794 235 LDTLLEAAALLKDR-PDIR----FLIVGD-----GPEKEELKE----LAKAL-------GLDNVTFLG-RVPKEELPELL 292 (394)
T ss_pred HHHHHHHHHHHhhc-CCeE----EEEeCC-----cccHHHHHH----HHHHc-------CCCcEEEeC-CCChHHHHHHH
Confidence 99999999998776 6554 877763 344333332 22211 223577765 89999999999
Q ss_pred HhcccceecccccCC-----CcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCHHHH
Q 004314 431 TIAECVVVTAVRDGM-----NLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEAT 502 (761)
Q Consensus 431 ~~ADv~vvtS~~EGm-----nLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~ 502 (761)
+.||++++||..|++ ++..+|||+||. |+|+|+.+|..+.+. .|+++++.|++++
T Consensus 293 ~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~-----------------pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l 355 (394)
T cd03794 293 AAADVGLVPLKPGPAFEGVSPSKLFEYMAAGK-----------------PVLASVDGESAELVEEAGAGLVVPPGDPEAL 355 (394)
T ss_pred HhhCeeEEeccCcccccccCchHHHHHHHCCC-----------------cEEEecCCCchhhhccCCcceEeCCCCHHHH
Confidence 999999999999876 556799999976 999999999988884 4899999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHhhHHh-hCCHHHHHHHH
Q 004314 503 AEAMHEAIQMNEAEKQLRHEKHYRYVS-THDVAYWARSF 540 (761)
Q Consensus 503 A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~Wa~~~ 540 (761)
+++|.++++.+ ++++.+.++.++++. .+++..+++++
T Consensus 356 ~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~ 393 (394)
T cd03794 356 AAAILELLDDP-EERAEMGENGRRYVEEKFSREKLAERL 393 (394)
T ss_pred HHHHHHHHhCh-HHHHHHHHHHHHHHHHhhcHHHHHHhc
Confidence 99999999654 466677777888887 78988888875
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.5e-18 Score=188.28 Aligned_cols=273 Identities=18% Similarity=0.172 Sum_probs=192.6
Q ss_pred HHhCCCCCEEEEeCCccc-hHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcch----HHHHHH-hhhcCEEeeeCHHHH
Q 004314 195 EVINPEDDYVWIHDYHLM-VLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVR----EEILKA-LLNADLIGFHTFDYA 268 (761)
Q Consensus 195 ~~~~~~~DiVwvhDyhl~-llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r----~~il~~-ll~~DligF~t~~~~ 268 (761)
+..+| |+|++|+.... .+...+.+ ..++++.+++|..||..-........ ..+.+. ...+|.+-+.+....
T Consensus 80 ~~~~p--dii~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~ 156 (364)
T cd03814 80 DAFAP--DVVHIATPGPLGLAALRAAR-RLGIPVVTSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLA 156 (364)
T ss_pred HhcCC--CEEEEeccchhhHHHHHHHH-HcCCCEEEEEecChHHHhhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHHH
Confidence 44566 89999975443 22223333 35788999999888733211111111 122222 346788888777665
Q ss_pred HHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc--CCCeEEEeecCcc
Q 004314 269 RHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF--EGKTVLLGVDDMD 346 (761)
Q Consensus 269 ~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~--~~~~vil~VdRld 346 (761)
..+.. .. ..++.++|+|+|...|.+.... ...++++ .++++++++||+.
T Consensus 157 ~~~~~--------------------~~--~~~~~~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~i~~~G~~~ 207 (364)
T cd03814 157 DELRA--------------------RG--FRRVRLWPRGVDTELFHPRRRD-------EALRARLGPPDRPVLLYVGRLA 207 (364)
T ss_pred HHHhc--------------------cC--CCceeecCCCccccccCccccc-------HHHHHHhCCCCCeEEEEEeccc
Confidence 53221 00 1256789999999888643211 1112222 4678899999999
Q ss_pred ccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHH
Q 004314 347 IFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSER 426 (761)
Q Consensus 347 ~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el 426 (761)
+.||+..+++|+.++.++ |+++ |+++|. +++...++ .. ...|.++ +.++.+++
T Consensus 208 ~~k~~~~~i~~~~~l~~~-~~~~----l~i~G~-----~~~~~~~~--------~~--------~~~v~~~-g~~~~~~~ 260 (364)
T cd03814 208 PEKNLEALLDADLPLRRR-PPVR----LVIVGD-----GPARARLE--------AR--------YPNVHFL-GFLDGEEL 260 (364)
T ss_pred cccCHHHHHHHHHHhhhc-CCce----EEEEeC-----CchHHHHh--------cc--------CCcEEEE-eccCHHHH
Confidence 999999999999999876 6655 887773 33322222 11 1246655 56899999
Q ss_pred HHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCHHHHH
Q 004314 427 AAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATA 503 (761)
Q Consensus 427 ~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A 503 (761)
..+|+.||++++||..||+|++++|||+||. |+|+|+.+|..+.+. .|++++|.|.++++
T Consensus 261 ~~~~~~~d~~l~~s~~e~~~~~~lEa~a~g~-----------------PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~ 323 (364)
T cd03814 261 AAAYASADVFVFPSRTETFGLVVLEAMASGL-----------------PVVAPDAGGPADIVTDGENGLLVEPGDAEAFA 323 (364)
T ss_pred HHHHHhCCEEEECcccccCCcHHHHHHHcCC-----------------CEEEcCCCCchhhhcCCcceEEcCCCCHHHHH
Confidence 9999999999999999999999999999976 999999999888884 48999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHHHH
Q 004314 504 EAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDM 544 (761)
Q Consensus 504 ~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l 544 (761)
++|.++++.++ ++..+.+..++++.++++..+++++++.+
T Consensus 324 ~~i~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 324 AALAALLADPE-LRRRMAARARAEAERRSWEAFLDNLLEAY 363 (364)
T ss_pred HHHHHHHcCHH-HHHHHHHHHHHHHhhcCHHHHHHHHHHhh
Confidence 99999998764 55666677788888899999998887643
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.5e-19 Score=204.27 Aligned_cols=318 Identities=13% Similarity=0.152 Sum_probs=187.6
Q ss_pred eecChhhhhhhhhccccccccccccccccCCCCCCCccChHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCC-ccchH-
Q 004314 137 AFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDY-HLMVL- 214 (761)
Q Consensus 137 v~l~~~~~~~~y~gf~~~~LWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDy-hl~ll- 214 (761)
+|=++++++.|......+=.-+-.--.+.++| ++|....-.. .-+-... +.+...+| |+||+|.. ||-..
T Consensus 379 ~F~~p~eQe~~ir~wl~~r~g~~~~~~i~fYp---g~~~~~~~SI-~p~gdI~--~~L~~f~P--DVVHLatP~~LGw~~ 450 (794)
T PLN02501 379 TFSSPEEQESYIRNWLEERIGFKADFKISFYP---GKFSKERRSI-IPAGDTS--QFIPSKDA--DIAILEEPEHLNWYH 450 (794)
T ss_pred ccCCHHHHHHHHHHHHHHhcCCCCCceEEeec---chhccCCccc-cchHHHH--HHhhccCC--CEEEECCchhhccHH
Confidence 67778888877776653321111000011222 3444322211 1122111 22233345 89999995 45455
Q ss_pred -HHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHH--HhhhcCceeeccCceeE
Q 004314 215 -PTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSC--CSRMLGLEYQSKRGYIG 291 (761)
Q Consensus 215 -p~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~--~~r~lg~~~~~~~g~~~ 291 (761)
+..+.+++. +++..+||.||. +++.... ..++.++ ..++++|+.. |++++.++.... .
T Consensus 451 ~Glr~ArKl~--PVVasyHTny~e--Yl~~y~~--g~L~~~l---------lk~l~~~v~r~hcD~VIaPS~atq-~--- 511 (794)
T PLN02501 451 HGKRWTDKFN--HVVGVVHTNYLE--YIKREKN--GALQAFF---------VKHINNWVTRAYCHKVLRLSAATQ-D--- 511 (794)
T ss_pred HHHHHHHHcC--CeEEEEeCCcHH--HHhHhcc--hhHHHHH---------HHHHHHHHHHhhCCEEEcCCHHHH-H---
Confidence 334444443 688889999985 3332211 1111110 1122333332 666666542221 1
Q ss_pred EEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc---CCCeEEEeecCccccCChHHHHHHHHHHHHhCCCC
Q 004314 292 LEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKW 368 (761)
Q Consensus 292 ~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~ 368 (761)
+. + ..|.. .+|||++.|.+.... . .. .++ ...+.+++||||.+.||+..+|+|+..+.++.|++
T Consensus 512 --L~-~-~vI~n-VnGVDte~F~P~~r~---~----~~-r~lgi~~~~kgiLfVGRLa~EKGld~LLeAla~L~~~~pnv 578 (794)
T PLN02501 512 --LP-K-SVICN-VHGVNPKFLKIGEKV---A----EE-RELGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNELDGF 578 (794)
T ss_pred --hc-c-cceee-cccccccccCCcchh---H----HH-HhcCCccccCceEEEEcccccCCHHHHHHHHHHHHhhCCCe
Confidence 11 1 11111 259999999864321 1 11 122 12245889999999999999999999998888875
Q ss_pred cCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcc
Q 004314 369 QGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLT 448 (761)
Q Consensus 369 ~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv 448 (761)
+ |+++| +|++.+++ ++++.+.+ . .|.|+++ .++..++|+.+||||+||.+||||+|
T Consensus 579 r----LvIVG-----DGP~reeL----e~la~eLg-------L-~V~FLG~---~dd~~~lyasaDVFVlPS~sEgFGlV 634 (794)
T PLN02501 579 N----LDVFG-----NGEDAHEV----QRAAKRLD-------L-NLNFLKG---RDHADDSLHGYKVFINPSISDVLCTA 634 (794)
T ss_pred E----EEEEc-----CCccHHHH----HHHHHHcC-------C-EEEecCC---CCCHHHHHHhCCEEEECCCcccchHH
Confidence 5 88887 46665444 44444433 1 2666543 34456899999999999999999999
Q ss_pred hhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc--CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhh
Q 004314 449 PYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS--GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYR 526 (761)
Q Consensus 449 ~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~ 526 (761)
++||||||. |||+|+..|...... ++++ +.|.++++++|.++|.+++ ++ ..++.
T Consensus 635 lLEAMA~Gl-----------------PVVATd~pG~e~V~~g~nGll--~~D~EafAeAI~~LLsd~~-~r-l~~~a--- 690 (794)
T PLN02501 635 TAEALAMGK-----------------FVVCADHPSNEFFRSFPNCLT--YKTSEDFVAKVKEALANEP-QP-LTPEQ--- 690 (794)
T ss_pred HHHHHHcCC-----------------CEEEecCCCCceEeecCCeEe--cCCHHHHHHHHHHHHhCch-hh-hHHHH---
Confidence 999999986 999999988543222 3443 3789999999999999775 22 22222
Q ss_pred HHhhCCHHHHHHHHHHH
Q 004314 527 YVSTHDVAYWARSFFQD 543 (761)
Q Consensus 527 ~v~~~~~~~Wa~~~l~~ 543 (761)
...+++..-++++++.
T Consensus 691 -~~~~SWeAaadrLle~ 706 (794)
T PLN02501 691 -RYNLSWEAATQRFMEY 706 (794)
T ss_pred -HhhCCHHHHHHHHHHh
Confidence 2366666666666654
|
|
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.3e-19 Score=194.65 Aligned_cols=194 Identities=17% Similarity=0.202 Sum_probs=144.6
Q ss_pred eccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCC
Q 004314 304 MPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARG 383 (761)
Q Consensus 304 ~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~ 383 (761)
+|.|||++.|.+... ...+.++++...+++..++++|+|+++.||+..+++|++++.+++|++..++.|+++|.
T Consensus 118 I~~GVD~~~f~p~~~--~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~---- 191 (335)
T PHA01633 118 VFHGINFKIVENAEK--LVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISH---- 191 (335)
T ss_pred eeCCCChhhcCccch--hhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcH----
Confidence 567999999875321 01111222222235677899999999999999999999999999998866677776641
Q ss_pred CchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEc--CCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCC
Q 004314 384 RGKDLEEIQAEIHATCKRINETFGRPGYEPVVFID--KPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSG 461 (761)
Q Consensus 384 ~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~--~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~ 461 (761)
. ++. +.+ .. ..|.|++ +.++.+++.++|+.||+||+||..||||++++||||||.
T Consensus 192 --~-------~~~----~l~----l~--~~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~---- 248 (335)
T PHA01633 192 --K-------QFT----QLE----VP--ANVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGT---- 248 (335)
T ss_pred --H-------HHH----HcC----CC--CcEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcCC----
Confidence 1 111 111 11 1477664 677899999999999999999999999999999999976
Q ss_pred CCCCCCCCCCCCceEEEcCCCCCcccccC---------------------cEEECCCCHHHHHHHHHHHHcCCHHHHHHH
Q 004314 462 SESSSESSAPKKSMLVVSEFIGCSPSLSG---------------------AIRVNPWNIEATAEAMHEAIQMNEAEKQLR 520 (761)
Q Consensus 462 ~~~~~~~~~~~~g~lV~Se~~G~~~~l~~---------------------al~VnP~d~~~~A~ai~~aL~m~~~er~~r 520 (761)
|+|+|..+|..+..++ |+.++++|++++|++|..++.+.+. .+|
T Consensus 249 -------------PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~~--~~~ 313 (335)
T PHA01633 249 -------------PVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQDR--EER 313 (335)
T ss_pred -------------CEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccCh--hhh
Confidence 8999988877664321 4577889999999999999888643 333
Q ss_pred HHHHhhHHhhCCHHHHHHHHH
Q 004314 521 HEKHYRYVSTHDVAYWARSFF 541 (761)
Q Consensus 521 ~~~~~~~v~~~~~~~Wa~~~l 541 (761)
..+.++..+++|+..-+++++
T Consensus 314 ~~~~~~~a~~f~~~~~~~~~~ 334 (335)
T PHA01633 314 SMKLKELAKKYDIRNLYTRFL 334 (335)
T ss_pred hHHHHHHHHhcCHHHHHHHhh
Confidence 456678888999888777764
|
|
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.1e-18 Score=184.71 Aligned_cols=278 Identities=21% Similarity=0.210 Sum_probs=193.1
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcC
Q 004314 201 DDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLG 280 (761)
Q Consensus 201 ~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg 280 (761)
-|+|++|......+......+..+.++.+..|.+++....... ..+......+..+|.+.+.+....+.|.+..
T Consensus 94 ~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~----- 167 (377)
T cd03798 94 PDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR-LLRALLRRALRRADAVIAVSEALADELKALG----- 167 (377)
T ss_pred CCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh-hHHHHHHHHHhcCCeEEeCCHHHHHHHHHhc-----
Confidence 3899999655443333333334457889999987654321111 1222233345678999999987776665310
Q ss_pred ceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHHHHHHH
Q 004314 281 LEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEH 360 (761)
Q Consensus 281 ~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ 360 (761)
....++.++|+|+|...+.+... .....+ ....++..++++||+++.||+..+++|++.
T Consensus 168 ---------------~~~~~~~~i~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~i~~~g~~~~~k~~~~li~~~~~ 226 (377)
T cd03798 168 ---------------IDPEKVTVIPNGVDTERFSPADR-----AEARKL-GLPEDKKVILFVGRLVPRKGIDYLIEALAR 226 (377)
T ss_pred ---------------CCCCceEEcCCCcCcccCCCcch-----HHHHhc-cCCCCceEEEEeccCccccCHHHHHHHHHH
Confidence 11236788999999988764321 111111 112467899999999999999999999999
Q ss_pred HHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecc
Q 004314 361 LLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTA 440 (761)
Q Consensus 361 ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS 440 (761)
+.+++|+++ |+++|. +++... +.++++..+ ..+.+.+.+.++.+++..+|+.||++++||
T Consensus 227 ~~~~~~~~~----l~i~g~-----~~~~~~----~~~~~~~~~-------~~~~v~~~g~~~~~~~~~~~~~ad~~i~~~ 286 (377)
T cd03798 227 LLKKRPDVH----LVIVGD-----GPLREA----LEALAAELG-------LEDRVTFLGAVPHEEVPAYYAAADVFVLPS 286 (377)
T ss_pred HHhcCCCeE----EEEEcC-----CcchHH----HHHHHHhcC-------CcceEEEeCCCCHHHHHHHHHhcCeeecch
Confidence 988776654 777663 333323 333333322 123333557899999999999999999999
Q ss_pred cccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCHHHHHHHHHHHHcCCHHHH
Q 004314 441 VRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAIQMNEAEK 517 (761)
Q Consensus 441 ~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~~er 517 (761)
..||+|++++|||+||. |+|+|+.+|..+.+. .|+++++.|+++++++|.++++++..
T Consensus 287 ~~~~~~~~~~Ea~~~G~-----------------pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~-- 347 (377)
T cd03798 287 LREGFGLVLLEAMACGL-----------------PVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLLADPWL-- 347 (377)
T ss_pred hhccCChHHHHHHhcCC-----------------CEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHhcCcHH--
Confidence 99999999999999976 899999988887773 36899999999999999999998754
Q ss_pred HHHHHHHhh-HHhhCCHHHHHHHHHHHHH
Q 004314 518 QLRHEKHYR-YVSTHDVAYWARSFFQDME 545 (761)
Q Consensus 518 ~~r~~~~~~-~v~~~~~~~Wa~~~l~~l~ 545 (761)
.+..+.++ ....+++..+++.+...++
T Consensus 348 -~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 375 (377)
T cd03798 348 -RLGRAARRRVAERFSWENVAERLLELYR 375 (377)
T ss_pred -HHhHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 33344444 4456788888887776654
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.1e-18 Score=196.23 Aligned_cols=268 Identities=13% Similarity=0.098 Sum_probs=168.7
Q ss_pred HHHHhCCCCCEEEEeCCccc-hH--HHHHHHhcCCCeEEEEEecCCCchhHHhcCc--chHHHHHHhhhcCEEeeeCHHH
Q 004314 193 VIEVINPEDDYVWIHDYHLM-VL--PTFLRRRFTRLRMGFFLHSPFPSSEIYRTLP--VREEILKALLNADLIGFHTFDY 267 (761)
Q Consensus 193 i~~~~~~~~DiVwvhDyhl~-ll--p~~lr~~~~~~~ig~flH~PfP~~e~fr~lp--~r~~il~~ll~~DligF~t~~~ 267 (761)
+++..+| |+|++|+.-.+ .+ ...+++++ .. +..++|+.|+ ++++... .....+...+ ..+
T Consensus 111 ~l~~~~p--DVIHv~tP~~LG~~~~g~~~~~k~-~~-vV~tyHT~y~--~Y~~~~~~g~~~~~l~~~~---------~~~ 175 (462)
T PLN02846 111 TIPDEEA--DIAVLEEPEHLTWYHHGKRWKTKF-RL-VIGIVHTNYL--EYVKREKNGRVKAFLLKYI---------NSW 175 (462)
T ss_pred HHHhcCC--CEEEEcCchhhhhHHHHHHHHhcC-Cc-EEEEECCChH--HHHHHhccchHHHHHHHHH---------HHH
Confidence 3344566 89999995544 43 34455554 34 7778999885 3333211 1112222111 122
Q ss_pred HHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc-C-C--CeEEEeec
Q 004314 268 ARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF-E-G--KTVLLGVD 343 (761)
Q Consensus 268 ~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~-~-~--~~vil~Vd 343 (761)
++.| .|+.++.++... .+ +.. .+.+.+.|||.+.|.+.... +++.+ + + .+++++||
T Consensus 176 ~~r~--~~d~vi~pS~~~-~~-----l~~---~~i~~v~GVd~~~f~~~~~~---------~~~~~~~~~~~~~~~l~vG 235 (462)
T PLN02846 176 VVDI--YCHKVIRLSAAT-QD-----YPR---SIICNVHGVNPKFLEIGKLK---------LEQQKNGEQAFTKGAYYIG 235 (462)
T ss_pred HHHH--hcCEEEccCHHH-HH-----Hhh---CEEecCceechhhcCCCccc---------HhhhcCCCCCcceEEEEEe
Confidence 2222 144444443211 11 001 12223589999988754211 11222 2 2 35799999
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCH
Q 004314 344 DMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTL 423 (761)
Q Consensus 344 Rld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~ 423 (761)
||...||+..+|+||.++.+..|+++ |+++| +|++.+++++ ++.+++ . .++++.+..+.
T Consensus 236 RL~~eK~~~~Li~a~~~l~~~~~~~~----l~ivG-----dGp~~~~L~~----~a~~l~-------l-~~~vf~G~~~~ 294 (462)
T PLN02846 236 KMVWSKGYKELLKLLHKHQKELSGLE----VDLYG-----SGEDSDEVKA----AAEKLE-------L-DVRVYPGRDHA 294 (462)
T ss_pred cCcccCCHHHHHHHHHHHHhhCCCeE----EEEEC-----CCccHHHHHH----HHHhcC-------C-cEEEECCCCCH
Confidence 99999999999999999988888765 88777 5777655544 444433 1 14446665444
Q ss_pred HHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCHH
Q 004314 424 SERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIE 500 (761)
Q Consensus 424 ~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~ 500 (761)
+ ++|+.+||||+||..||||+|.+||||||. |+|+++..| .+.+. +++.+ .|.+
T Consensus 295 ~---~~~~~~DvFv~pS~~Et~g~v~lEAmA~G~-----------------PVVa~~~~~-~~~v~~~~ng~~~--~~~~ 351 (462)
T PLN02846 295 D---PLFHDYKVFLNPSTTDVVCTTTAEALAMGK-----------------IVVCANHPS-NEFFKQFPNCRTY--DDGK 351 (462)
T ss_pred H---HHHHhCCEEEECCCcccchHHHHHHHHcCC-----------------cEEEecCCC-cceeecCCceEec--CCHH
Confidence 3 699999999999999999999999999986 899998876 46662 36666 4899
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHHHHH
Q 004314 501 ATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDME 545 (761)
Q Consensus 501 ~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l~ 545 (761)
+++++|.++|+.++++...+ . ...+++..=+++|++.++
T Consensus 352 ~~a~ai~~~l~~~~~~~~~~---a---~~~~SWe~~~~~l~~~~~ 390 (462)
T PLN02846 352 GFVRATLKALAEEPAPLTDA---Q---RHELSWEAATERFLRVAD 390 (462)
T ss_pred HHHHHHHHHHccCchhHHHH---H---HHhCCHHHHHHHHHHHhc
Confidence 99999999998654332211 1 236777777777776654
|
|
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.3e-18 Score=192.35 Aligned_cols=277 Identities=17% Similarity=0.090 Sum_probs=187.3
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCC-CchhHHhcCcc---hHHHHHHhhhcCEE
Q 004314 185 ANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPF-PSSEIYRTLPV---REEILKALLNADLI 260 (761)
Q Consensus 185 vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~Pf-P~~e~fr~lp~---r~~il~~ll~~Dli 260 (761)
.-+.|-+.+.. . ...|++.+|..+.... .+.......+...++|... .....-...++ .+.++..+-.+|.|
T Consensus 86 l~~~~l~~l~~-~-~~~diii~~~~~~~~~--~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i 161 (372)
T cd04949 86 LFAFFLDELNK-D-TKPDVFILDRPTLDGQ--ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINNFYEYVFENLDKVDGV 161 (372)
T ss_pred HHHHHHHHHhc-C-CCCCEEEECCccccch--hHHhccCCceEEEEEChHHhCCcccccccccchhhHHHHhChhhCCEE
Confidence 33344444433 1 2358999988776654 2233334556677788532 11100001111 23445556678999
Q ss_pred eeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEE
Q 004314 261 GFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLL 340 (761)
Q Consensus 261 gF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil 340 (761)
.+.+..-.+.+... ++ ...++.++|+|++...+.+.. .....+..++
T Consensus 162 i~~s~~~~~~l~~~----~~----------------~~~~v~~ip~g~~~~~~~~~~-------------~~~~~~~~i~ 208 (372)
T cd04949 162 IVATEQQKQDLQKQ----FG----------------NYNPIYTIPVGSIDPLKLPAQ-------------FKQRKPHKII 208 (372)
T ss_pred EEccHHHHHHHHHH----hC----------------CCCceEEEcccccChhhcccc-------------hhhcCCCeEE
Confidence 98888766666431 11 111277899999987765321 0113456899
Q ss_pred eecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCC
Q 004314 341 GVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKP 420 (761)
Q Consensus 341 ~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~ 420 (761)
++||+.+.||+..+++|+.++.+++|+++ |+++|. +++...+ ..++.+.+. .+ .|.+ .|
T Consensus 209 ~vgrl~~~K~~~~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~~~----~~~~~~~~~----~~--~v~~-~g- 267 (372)
T cd04949 209 TVARLAPEKQLDQLIKAFAKVVKQVPDAT----LDIYGY-----GDEEEKL----KELIEELGL----ED--YVFL-KG- 267 (372)
T ss_pred EEEccCcccCHHHHHHHHHHHHHhCCCcE----EEEEEe-----CchHHHH----HHHHHHcCC----cc--eEEE-cC-
Confidence 99999999999999999999999999876 887774 3332233 333333321 11 3554 44
Q ss_pred CCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCC-CCccccc---CcEEECC
Q 004314 421 VTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFI-GCSPSLS---GAIRVNP 496 (761)
Q Consensus 421 v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~-G~~~~l~---~al~VnP 496 (761)
..+++.++|+.||++|+||..||||++.+|||+||. |+|+|+.. |..+.+. +|++++|
T Consensus 268 -~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~-----------------PvI~~~~~~g~~~~v~~~~~G~lv~~ 329 (372)
T cd04949 268 -YTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGL-----------------PVISYDVNYGPSEIIEDGENGYLVPK 329 (372)
T ss_pred -CCCCHHHHHhhhhEEEecccccccChHHHHHHhCCC-----------------CEEEecCCCCcHHHcccCCCceEeCC
Confidence 356799999999999999999999999999999976 89999887 6777763 4899999
Q ss_pred CCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHH
Q 004314 497 WNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWAR 538 (761)
Q Consensus 497 ~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~ 538 (761)
.|++++|++|..+++.+ +.++.+.++.++...++++..+++
T Consensus 330 ~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~~s~~~~~~ 370 (372)
T cd04949 330 GDIEALAEAIIELLNDP-KLLQKFSEAAYENAERYSEENVWE 370 (372)
T ss_pred CcHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHhhHHHHHh
Confidence 99999999999999976 355666667777777777666654
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.81 E-value=4e-18 Score=182.34 Aligned_cols=259 Identities=16% Similarity=0.139 Sum_probs=177.8
Q ss_pred CEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcCc
Q 004314 202 DYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGL 281 (761)
Q Consensus 202 DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg~ 281 (761)
|+|++|+.+...+...+... ..++.+..|..++...... .+....-..+..+|.+.+.+......+.
T Consensus 85 d~i~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~~~--------- 151 (348)
T cd03820 85 DVVISFLTSLLTFLASLGLK--IVKLIVSEHNSPDAYKKRL--RRLLLRRLLYRRADAVVVLTEEDRALYY--------- 151 (348)
T ss_pred CEEEEcCchHHHHHHHHhhc--cccEEEecCCCccchhhhh--HHHHHHHHHHhcCCEEEEeCHHHHHHhh---------
Confidence 89999998822222222221 1478888887765432111 0111122234567888877765541110
Q ss_pred eeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHHHHHHHH
Q 004314 282 EYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHL 361 (761)
Q Consensus 282 ~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~l 361 (761)
.....++.++|+|++...+... ...+++.++++||+.+.||+..+++|++++
T Consensus 152 -------------~~~~~~~~vi~~~~~~~~~~~~---------------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l 203 (348)
T cd03820 152 -------------KKFNKNVVVIPNPLPFPPEEPS---------------SDLKSKRILAVGRLVPQKGFDLLIEAWAKI 203 (348)
T ss_pred -------------ccCCCCeEEecCCcChhhcccc---------------CCCCCcEEEEEEeeccccCHHHHHHHHHHH
Confidence 0112367889999998765431 124577899999999999999999999999
Q ss_pred HHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceeccc
Q 004314 362 LKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAV 441 (761)
Q Consensus 362 l~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~ 441 (761)
.+.+|+++ |+++|. +++... +.+++.+.+.. ..|. +.+. .+++..+|+.||++++||.
T Consensus 204 ~~~~~~~~----l~i~G~-----~~~~~~----~~~~~~~~~~~------~~v~-~~g~--~~~~~~~~~~ad~~i~ps~ 261 (348)
T cd03820 204 AKKHPDWK----LRIVGD-----GPEREA----LEALIKELGLE------DRVI-LLGF--TKNIEEYYAKASIFVLTSR 261 (348)
T ss_pred HhcCCCeE----EEEEeC-----CCCHHH----HHHHHHHcCCC------CeEE-EcCC--cchHHHHHHhCCEEEeCcc
Confidence 88888765 777773 333323 33344443311 1344 4444 7899999999999999999
Q ss_pred ccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcccc-c---CcEEECCCCHHHHHHHHHHHHcCCHHHH
Q 004314 442 RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL-S---GAIRVNPWNIEATAEAMHEAIQMNEAEK 517 (761)
Q Consensus 442 ~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~---~al~VnP~d~~~~A~ai~~aL~m~~~er 517 (761)
.||||++++|||+||. |+|+|+..|..+.+ . .|+++++.|++++|++|.++++.++ .+
T Consensus 262 ~e~~~~~~~Ea~a~G~-----------------Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~~~-~~ 323 (348)
T cd03820 262 FEGFPMVLLEAMAFGL-----------------PVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMEDEE-LR 323 (348)
T ss_pred ccccCHHHHHHHHcCC-----------------CEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcCHH-HH
Confidence 9999999999999976 89999876544444 2 5899999999999999999998653 44
Q ss_pred HHHHHHHhhHHhhCCHHHHHHHHH
Q 004314 518 QLRHEKHYRYVSTHDVAYWARSFF 541 (761)
Q Consensus 518 ~~r~~~~~~~v~~~~~~~Wa~~~l 541 (761)
+...++.++.++++++...+++|.
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 324 KRMGANARESAERFSIENIIKQWE 347 (348)
T ss_pred HHHHHHHHHHHHHhCHHHHHHHhc
Confidence 445555677888889888887764
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.80 E-value=1e-17 Score=181.11 Aligned_cols=262 Identities=18% Similarity=0.173 Sum_probs=178.7
Q ss_pred HHHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHH
Q 004314 192 RVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHF 271 (761)
Q Consensus 192 ~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~F 271 (761)
++++..++ |+|++|.+..+.++.+...+..++++.+++|-.++.. +....+. ...|.+-..+....+.|
T Consensus 90 ~~~~~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~hd~~~~~------~~~~~~~---~~~d~ii~~s~~~~~~~ 158 (359)
T cd03823 90 RLLEDFRP--DVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWLIC------PRQGLFK---KGGDAVIAPSRFLLDRY 158 (359)
T ss_pred HHHHHcCC--CEEEECCccchHHHHHHHHHhcCCCEEEEEeeeeeec------chhhhhc---cCCCEEEEeCHHHHHHH
Confidence 34444455 8999998855544333222334689999999765422 1111111 11288888777665555
Q ss_pred HHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCCh
Q 004314 272 LSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGV 351 (761)
Q Consensus 272 l~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi 351 (761)
.. .+ ....++.++|+|+|...+..... ....++.+++++||+.+.||+
T Consensus 159 ~~-----~~---------------~~~~~~~vi~n~~~~~~~~~~~~------------~~~~~~~~i~~~G~~~~~k~~ 206 (359)
T cd03823 159 VA-----NG---------------LFAEKISVIRNGIDLDRAKRPRR------------APPGGRLRFGFIGQLTPHKGV 206 (359)
T ss_pred HH-----cC---------------CCccceEEecCCcChhhcccccc------------CCCCCceEEEEEecCccccCH
Confidence 42 01 01246789999999987754210 112467789999999999999
Q ss_pred HHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHH
Q 004314 352 DLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYT 431 (761)
Q Consensus 352 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~ 431 (761)
..+++|+.++.+ ++. .|+++|.. +......... .. -..|. +.+.++.+++..+|+
T Consensus 207 ~~li~~~~~l~~--~~~----~l~i~G~~-----~~~~~~~~~~-----~~--------~~~v~-~~g~~~~~~~~~~~~ 261 (359)
T cd03823 207 DLLLEAFKRLPR--GDI----ELVIVGNG-----LELEEESYEL-----EG--------DPRVE-FLGAYPQEEIDDFYA 261 (359)
T ss_pred HHHHHHHHHHHh--cCc----EEEEEcCc-----hhhhHHHHhh-----cC--------CCeEE-EeCCCCHHHHHHHHH
Confidence 999999999876 544 48877742 2211111111 11 11355 457889999999999
Q ss_pred hcccceeccc-ccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCHHHHHHHHH
Q 004314 432 IAECVVVTAV-RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMH 507 (761)
Q Consensus 432 ~ADv~vvtS~-~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~ 507 (761)
.||++++||. .||++++++|||+||. |+|+|+.+|..+.+. .|++++|.|+++++++|.
T Consensus 262 ~ad~~i~ps~~~e~~~~~~~Ea~a~G~-----------------Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~ 324 (359)
T cd03823 262 EIDVLVVPSIWPENFPLVIREALAAGV-----------------PVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALE 324 (359)
T ss_pred hCCEEEEcCcccCCCChHHHHHHHCCC-----------------CEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHH
Confidence 9999999997 7999999999999976 899999999888874 489999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHH
Q 004314 508 EAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQ 542 (761)
Q Consensus 508 ~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~ 542 (761)
++++.+ +.++...++.++.++. ..+++++++
T Consensus 325 ~l~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~ 355 (359)
T cd03823 325 RLIDDP-DLLERLRAGIEPPRSI---EDQAEEYLK 355 (359)
T ss_pred HHHhCh-HHHHHHHHhHHHhhhH---HHHHHHHHH
Confidence 999954 3455555555555543 455554443
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.5e-18 Score=188.73 Aligned_cols=240 Identities=14% Similarity=0.122 Sum_probs=166.6
Q ss_pred HHHHHhCCCCCEEEEeCCccchHHHHHHHhc-CCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHH
Q 004314 192 RVIEVINPEDDYVWIHDYHLMVLPTFLRRRF-TRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARH 270 (761)
Q Consensus 192 ~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~-~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~ 270 (761)
++++..+| |+||+|+.....+..++++.. ...++..+.|..++....+. ...+..+|.+-..+..-.++
T Consensus 78 ~~l~~~~~--Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~--------~~~~~~~d~~i~~S~~~~~~ 147 (359)
T PRK09922 78 KWLKETQP--DIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHKKHAE--------CKKITCADYHLAISSGIKEQ 147 (359)
T ss_pred HHHHhcCC--CEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCcccccchhh--------hhhhhcCCEEEEcCHHHHHH
Confidence 34444565 899999987766666666543 23455666676554322111 12235688888777665555
Q ss_pred HHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCcc--cc
Q 004314 271 FLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMD--IF 348 (761)
Q Consensus 271 Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld--~~ 348 (761)
+.. .++ ...++.++|+|||.+.+.... + ...++++++++||+. ..
T Consensus 148 ~~~-----~~~---------------~~~ki~vi~N~id~~~~~~~~--~-----------~~~~~~~i~~~Grl~~~~~ 194 (359)
T PRK09922 148 MMA-----RGI---------------SAQRISVIYNPVEIKTIIIPP--P-----------ERDKPAVFLYVGRLKFEGQ 194 (359)
T ss_pred HHH-----cCC---------------CHHHEEEEcCCCCHHHccCCC--c-----------ccCCCcEEEEEEEEecccC
Confidence 432 121 112567789999976543211 0 013467899999996 46
Q ss_pred CChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCC--CHHHH
Q 004314 349 KGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPV--TLSER 426 (761)
Q Consensus 349 KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v--~~~el 426 (761)
||+..+++|+.++. + ++.|+++|. |++.+ ++++++++.|.. ..|.|. |.+ +.+++
T Consensus 195 k~~~~l~~a~~~~~---~----~~~l~ivG~-----g~~~~----~l~~~~~~~~l~------~~v~f~-G~~~~~~~~~ 251 (359)
T PRK09922 195 KNVKELFDGLSQTT---G----EWQLHIIGD-----GSDFE----KCKAYSRELGIE------QRIIWH-GWQSQPWEVV 251 (359)
T ss_pred cCHHHHHHHHHhhC---C----CeEEEEEeC-----CccHH----HHHHHHHHcCCC------CeEEEe-cccCCcHHHH
Confidence 99999999998762 2 355888873 44443 345555554321 136655 444 55899
Q ss_pred HHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcC-CCCCccccc---CcEEECCCCHHHH
Q 004314 427 AAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSE-FIGCSPSLS---GAIRVNPWNIEAT 502 (761)
Q Consensus 427 ~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se-~~G~~~~l~---~al~VnP~d~~~~ 502 (761)
..+|+.||++|+||..||||++++||||||. |+|+|+ .+|+.+.+. .|++|+|.|++++
T Consensus 252 ~~~~~~~d~~v~~s~~Egf~~~~lEAma~G~-----------------Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~l 314 (359)
T PRK09922 252 QQKIKNVSALLLTSKFEGFPMTLLEAMSYGI-----------------PCISSDCMSGPRDIIKPGLNGELYTPGNIDEF 314 (359)
T ss_pred HHHHhcCcEEEECCcccCcChHHHHHHHcCC-----------------CEEEeCCCCChHHHccCCCceEEECCCCHHHH
Confidence 9999999999999999999999999999986 999999 888888774 4899999999999
Q ss_pred HHHHHHHHcCCH
Q 004314 503 AEAMHEAIQMNE 514 (761)
Q Consensus 503 A~ai~~aL~m~~ 514 (761)
|++|.++++.++
T Consensus 315 a~~i~~l~~~~~ 326 (359)
T PRK09922 315 VGKLNKVISGEV 326 (359)
T ss_pred HHHHHHHHhCcc
Confidence 999999999874
|
|
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.80 E-value=7.4e-18 Score=190.01 Aligned_cols=273 Identities=12% Similarity=0.085 Sum_probs=175.7
Q ss_pred CCEEEEeCCccc--hHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcch---HHH---HHH-h-hhcCEEeeeCHHHHHH
Q 004314 201 DDYVWIHDYHLM--VLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVR---EEI---LKA-L-LNADLIGFHTFDYARH 270 (761)
Q Consensus 201 ~DiVwvhDyhl~--llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r---~~i---l~~-l-l~~DligF~t~~~~~~ 270 (761)
.|+|++|..... .+...+-.+..+.|+++.+|.-+++..-.. .+.. ..+ ++. + -.||.|...+....+.
T Consensus 96 ~Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~~~~~~~~~~-~~~~~~~~~~~~~~e~~~~~~ad~ii~vS~~~~~~ 174 (415)
T cd03816 96 ADYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYTILALK-LGENHPLVRLAKWYEKLFGRLADYNLCVTKAMKED 174 (415)
T ss_pred CCEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCCchHHHHhcc-cCCCCHHHHHHHHHHHHHhhcCCEeeecCHHHHHH
Confidence 499999985432 222333233457899999997543211000 0100 011 111 1 2467777766654433
Q ss_pred HHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHH---------------Hc--
Q 004314 271 FLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQ---------------QF-- 333 (761)
Q Consensus 271 Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~---------------~~-- 333 (761)
+.+ .+ ....+|.++|+| +...|.+... . .....+.+ ..
T Consensus 175 l~~-----~~---------------~~~~ki~vI~Ng-~~~~f~p~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (415)
T cd03816 175 LQQ-----FN---------------NWKIRATVLYDR-PPEQFRPLPL---E-EKHELFLKLAKTFLTRELRIGAVQLSE 229 (415)
T ss_pred HHh-----hh---------------ccCCCeeecCCC-CHHHceeCcH---H-HHHHHHHhccccccccccccccceecC
Confidence 321 11 123467889999 4566654321 1 11111111 01
Q ss_pred CCCeEEEeecCccccCChHHHHHHHHHHHHh------CCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccC
Q 004314 334 EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQ------HPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFG 407 (761)
Q Consensus 334 ~~~~vil~VdRld~~KGi~~~l~A~~~ll~~------~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g 407 (761)
++..++++++|+.+.||+..+++|+..+.+. +|+ +.|+++| +|+..+ ++++++++.+
T Consensus 230 ~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~----i~l~ivG-----~G~~~~----~l~~~~~~~~---- 292 (415)
T cd03816 230 ERPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPK----LLCIITG-----KGPLKE----KYLERIKELK---- 292 (415)
T ss_pred CCceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCC----EEEEEEe-----cCccHH----HHHHHHHHcC----
Confidence 2356888999999999999999999998763 344 4488887 344433 4445554433
Q ss_pred CCCCccEEEEcCCCCHHHHHHHHHhcccceec---ccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCC
Q 004314 408 RPGYEPVVFIDKPVTLSERAAYYTIAECVVVT---AVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGC 484 (761)
Q Consensus 408 ~~~~~pV~~~~~~v~~~el~aly~~ADv~vvt---S~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~ 484 (761)
...++++.+.++.++++.+|++||++|++ +..+||+++.+||||||. |+|+|..+|+
T Consensus 293 ---l~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~-----------------PVI~s~~~~~ 352 (415)
T cd03816 293 ---LKKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGL-----------------PVCALDFKCI 352 (415)
T ss_pred ---CCcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCC-----------------CEEEeCCCCH
Confidence 23588888889999999999999999864 335889999999999986 8999999998
Q ss_pred ccccc---CcEEECCCCHHHHHHHHHHHHcCC--HHHHHHHHHHHhhHHhhCCHHHHHHHHHH
Q 004314 485 SPSLS---GAIRVNPWNIEATAEAMHEAIQMN--EAEKQLRHEKHYRYVSTHDVAYWARSFFQ 542 (761)
Q Consensus 485 ~~~l~---~al~VnP~d~~~~A~ai~~aL~m~--~~er~~r~~~~~~~v~~~~~~~Wa~~~l~ 542 (761)
.+.+. +|++|+ |++++|++|.++++++ +++++.+.++.+++.+ .+|.+.+.+
T Consensus 353 ~eiv~~~~~G~lv~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~----~~~~~~~~~ 409 (415)
T cd03816 353 DELVKHGENGLVFG--DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEESE----LRWDENWDR 409 (415)
T ss_pred HHHhcCCCCEEEEC--CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhh----cCHHHHHHH
Confidence 88883 488884 9999999999999982 5556655556666664 445554443
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.3e-17 Score=179.29 Aligned_cols=275 Identities=17% Similarity=0.155 Sum_probs=191.7
Q ss_pred HHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCc--chHHHHH-HhhhcCEEeeeCHHHHHHH
Q 004314 195 EVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLP--VREEILK-ALLNADLIGFHTFDYARHF 271 (761)
Q Consensus 195 ~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp--~r~~il~-~ll~~DligF~t~~~~~~F 271 (761)
+..+| |+|++|..+..++..++++.....++.+..|...+.... .... ....+-+ .+-.+|.+.+.+....+.+
T Consensus 77 ~~~~~--dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~ 153 (359)
T cd03808 77 RKERP--DIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFTS-GGLKRRLYLLLERLALRFTDKVIFQNEDDRDLA 153 (359)
T ss_pred HhcCC--CEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhcc-chhHHHHHHHHHHHHHhhccEEEEcCHHHHHHH
Confidence 33455 899999888777777777656667788887765322110 0000 0011111 2345799999988887776
Q ss_pred HHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCCh
Q 004314 272 LSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGV 351 (761)
Q Consensus 272 l~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi 351 (761)
.+. +. ......+.+.|+|+|.+.+..... . ...++.+++++||+.+.||+
T Consensus 154 ~~~-----~~-------------~~~~~~~~~~~~~~~~~~~~~~~~-----~-------~~~~~~~i~~~G~~~~~k~~ 203 (359)
T cd03808 154 LKL-----GI-------------IKKKKTVLIPGSGVDLDRFSPSPE-----P-------IPEDDPVFLFVARLLKDKGI 203 (359)
T ss_pred HHh-----cC-------------CCcCceEEecCCCCChhhcCcccc-----c-------cCCCCcEEEEEeccccccCH
Confidence 541 10 001235667899999887754211 0 12467899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHH
Q 004314 352 DLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYT 431 (761)
Q Consensus 352 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~ 431 (761)
..+++|++.+.+++|+++ |+++|... ........ ++...+. ...|.+++ . .+++..+|+
T Consensus 204 ~~li~~~~~l~~~~~~~~----l~i~G~~~-----~~~~~~~~---~~~~~~~------~~~v~~~g-~--~~~~~~~~~ 262 (359)
T cd03808 204 DELLEAARILKAKGPNVR----LLLVGDGD-----EENPAAIL---EIEKLGL------EGRVEFLG-F--RDDVPELLA 262 (359)
T ss_pred HHHHHHHHHHHhcCCCeE----EEEEcCCC-----cchhhHHH---HHHhcCC------cceEEEee-c--cccHHHHHH
Confidence 999999999988777765 88777432 11111111 1222221 12466654 3 678999999
Q ss_pred hcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCHHHHHHHHHH
Q 004314 432 IAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHE 508 (761)
Q Consensus 432 ~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~ 508 (761)
.||++++||..||||++++|||+||. |+|+|+.+|+.+.+. .|+++++.|+++++++|.+
T Consensus 263 ~adi~i~ps~~e~~~~~~~Ea~~~G~-----------------Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~ 325 (359)
T cd03808 263 AADVFVLPSYREGLPRVLLEAMAMGR-----------------PVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIER 325 (359)
T ss_pred hccEEEecCcccCcchHHHHHHHcCC-----------------CEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHH
Confidence 99999999999999999999999986 899999999988884 3899999999999999999
Q ss_pred HHcCCHHHHHHHHHHHhhH-HhhCCHHHHHHHHH
Q 004314 509 AIQMNEAEKQLRHEKHYRY-VSTHDVAYWARSFF 541 (761)
Q Consensus 509 aL~m~~~er~~r~~~~~~~-v~~~~~~~Wa~~~l 541 (761)
++..++ .+....++.+++ ...+++..+++.++
T Consensus 326 l~~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 326 LIEDPE-LRARMGQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHhCHH-HHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 887653 455556667777 56788888888765
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.3e-17 Score=182.16 Aligned_cols=211 Identities=15% Similarity=0.115 Sum_probs=151.7
Q ss_pred hcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCC
Q 004314 256 NADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEG 335 (761)
Q Consensus 256 ~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~ 335 (761)
.+|.|...+......+.+ .+.. ...++.++|+|||++.|.+... ...+
T Consensus 94 ~ad~ii~~S~~~~~~l~~-----~g~~--------------~~~~i~vIpNGVd~~~f~~~~~-------------~~~~ 141 (331)
T PHA01630 94 PVDEIVVPSQWSKNAFYT-----SGLK--------------IPQPIYVIPHNLNPRMFEYKPK-------------EKPH 141 (331)
T ss_pred cCCEEEECCHHHHHHHHH-----cCCC--------------CCCCEEEECCCCCHHHcCCCcc-------------ccCC
Confidence 488888888766666542 1110 0125778999999988864211 0124
Q ss_pred CeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEE
Q 004314 336 KTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVV 415 (761)
Q Consensus 336 ~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~ 415 (761)
+.++++++|+.+.||+..+|+|++++.+++|+++ |+++|. +.. +. + +. .++ +
T Consensus 142 ~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~----llivG~-----~~~--~~--~---l~-~~~------~----- 193 (331)
T PHA01630 142 PCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFY----FLIKSS-----NML--DP--R---LF-GLN------G----- 193 (331)
T ss_pred CEEEEEeccccccCCHHHHHHHHHHHHhhCCCEE----EEEEeC-----ccc--ch--h---hc-ccc------c-----
Confidence 5566677889999999999999999988877655 877772 111 11 1 10 011 1
Q ss_pred EEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcE
Q 004314 416 FIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAI 492 (761)
Q Consensus 416 ~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al 492 (761)
+.+.++.+++..+|+.||+||+||..||||++++||||||. |+|+|..+|..+.+. +|+
T Consensus 194 -~~~~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~-----------------PVIas~~gg~~E~i~~~~ng~ 255 (331)
T PHA01630 194 -VKTPLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGL-----------------DVVVTEKGAWSEWVLSNLDVY 255 (331)
T ss_pred -eeccCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCC-----------------CEEEeCCCCchhhccCCCceE
Confidence 12468899999999999999999999999999999999986 999999988888773 244
Q ss_pred E--------------------ECCCCHHHHHHHHHHHHcCC-HHHHHHHHHH-HhhHHhhCCHHHHHHHHHHHHH
Q 004314 493 R--------------------VNPWNIEATAEAMHEAIQMN-EAEKQLRHEK-HYRYVSTHDVAYWARSFFQDME 545 (761)
Q Consensus 493 ~--------------------VnP~d~~~~A~ai~~aL~m~-~~er~~r~~~-~~~~v~~~~~~~Wa~~~l~~l~ 545 (761)
+ ++| |.+++++++.++|..+ +++++.+++. ...+.+++++...++++++-++
T Consensus 256 lv~~~~~~~~~~~~~~~~G~~v~~-~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~ 329 (331)
T PHA01630 256 WIKSGRKPKLWYTNPIHVGYFLDP-DIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILE 329 (331)
T ss_pred EeeecccccccccCCcccccccCC-CHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 4 455 7888999999999875 2345555544 4456678999999999888765
|
|
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.9e-17 Score=178.86 Aligned_cols=259 Identities=18% Similarity=0.185 Sum_probs=176.5
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHH-HHHhhhcCEEeeeCHHHHHHHHHHHhhhc
Q 004314 201 DDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEI-LKALLNADLIGFHTFDYARHFLSCCSRML 279 (761)
Q Consensus 201 ~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~i-l~~ll~~DligF~t~~~~~~Fl~~~~r~l 279 (761)
.|+|++|+...+.....+... .+.+..+++|........+. .....+ -..+..+|.+.+.+..+.+.+.. +
T Consensus 84 ~Dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~-----~ 155 (357)
T cd03795 84 ADVIHLHFPNPLADLALLLLP-RKKPVVVHWHSDIVKQKLLL--KLYRPLQRRFLRRADAIVATSPNYAETSPV-----L 155 (357)
T ss_pred CCEEEEecCcchHHHHHHHhc-cCceEEEEEcChhhccchhh--hhhhHHHHHHHHhcCEEEeCcHHHHHHHHH-----h
Confidence 389999986654322222222 46788888996432211110 111122 22456789988888776655431 1
Q ss_pred CceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHHHHHH
Q 004314 280 GLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAME 359 (761)
Q Consensus 280 g~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~ 359 (761)
+ ....++.++|+|+|...+.+... . .........++.+|+++||+.+.||+..+++|++
T Consensus 156 ~---------------~~~~~~~~i~~gi~~~~~~~~~~-----~-~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~ 214 (357)
T cd03795 156 R---------------RFRDKVRVIPLGLDPARYPRPDA-----L-EEAIWRRAAGRPFFLFVGRLVYYKGLDVLLEAAA 214 (357)
T ss_pred c---------------CCccceEEecCCCChhhcCCcch-----h-hhHhhcCCCCCcEEEEecccccccCHHHHHHHHH
Confidence 1 01136788999999987764211 0 0111111246789999999999999999999998
Q ss_pred HHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceec
Q 004314 360 HLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVT 439 (761)
Q Consensus 360 ~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvt 439 (761)
++. ++.|+++|. ++.. .++.+++.+.+. ...|.| .+.++.+++..+|+.||++++|
T Consensus 215 ~l~--------~~~l~i~G~-----g~~~----~~~~~~~~~~~~------~~~V~~-~g~v~~~~~~~~~~~ad~~i~p 270 (357)
T cd03795 215 ALP--------DAPLVIVGE-----GPLE----AELEALAAALGL------LDRVRF-LGRLDDEEKAALLAACDVFVFP 270 (357)
T ss_pred hcc--------CcEEEEEeC-----ChhH----HHHHHHHHhcCC------cceEEE-cCCCCHHHHHHHHHhCCEEEeC
Confidence 864 455887773 3332 334444433321 124665 5799999999999999999999
Q ss_pred cc--ccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc----CcEEECCCCHHHHHHHHHHHHcCC
Q 004314 440 AV--RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS----GAIRVNPWNIEATAEAMHEAIQMN 513 (761)
Q Consensus 440 S~--~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~----~al~VnP~d~~~~A~ai~~aL~m~ 513 (761)
|. .||+|++.+|||+||. |+|+|+.+|..+.+. .|++++|.|+++++++|.++++++
T Consensus 271 s~~~~e~~g~~~~Ea~~~g~-----------------Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~~ 333 (357)
T cd03795 271 SVERSEAFGIVLLEAMAFGK-----------------PVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLEDP 333 (357)
T ss_pred CcccccccchHHHHHHHcCC-----------------CEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHHCH
Confidence 96 5999999999999976 999999998887763 388999999999999999999965
Q ss_pred HHHHHHHHHHHhhHHhh
Q 004314 514 EAEKQLRHEKHYRYVST 530 (761)
Q Consensus 514 ~~er~~r~~~~~~~v~~ 530 (761)
++++.+.++.++++.+
T Consensus 334 -~~~~~~~~~~~~~~~~ 349 (357)
T cd03795 334 -ELRERLGEAARERAEE 349 (357)
T ss_pred -HHHHHHHHHHHHHHHH
Confidence 4566666677777755
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.77 E-value=6.4e-17 Score=181.16 Aligned_cols=216 Identities=15% Similarity=0.114 Sum_probs=152.4
Q ss_pred hhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc-
Q 004314 255 LNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF- 333 (761)
Q Consensus 255 l~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~- 333 (761)
-.+|.|.+.+....+.+.. ..+ ....++.++|+|||.+.|.+..... ..+
T Consensus 171 ~~ad~vi~~S~~~~~~l~~----~~~---------------~~~~~v~vipngvd~~~f~~~~~~~----------~~~~ 221 (397)
T TIGR03087 171 ARFDAATFVSRAEAELFRR----LAP---------------EAAGRITAFPNGVDADFFSPDRDYP----------NPYP 221 (397)
T ss_pred hhCCeEEEcCHHHHHHHHH----hCC---------------CCCCCeEEeecccchhhcCCCcccc----------CCCC
Confidence 4578887777766655532 101 1123577899999999886532100 112
Q ss_pred CCCeEEEeecCccccCChHHHH----HHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCC
Q 004314 334 EGKTVLLGVDDMDIFKGVDLKL----LAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRP 409 (761)
Q Consensus 334 ~~~~vil~VdRld~~KGi~~~l----~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~ 409 (761)
.++++|+++||+++.||+..++ .++..+.+++|+++ |++||. +++ .+++++.. .
T Consensus 222 ~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~----l~ivG~-----g~~-----~~~~~l~~----~---- 279 (397)
T TIGR03087 222 PGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAE----FYIVGA-----KPS-----PAVRALAA----L---- 279 (397)
T ss_pred CCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcE----EEEECC-----CCh-----HHHHHhcc----C----
Confidence 3567899999999999999887 56667777888876 888873 332 12333321 1
Q ss_pred CCccEEEEcCCCCHHHHHHHHHhcccceeccc-ccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcccc
Q 004314 410 GYEPVVFIDKPVTLSERAAYYTIAECVVVTAV-RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL 488 (761)
Q Consensus 410 ~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~-~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 488 (761)
..|.+. |.++ ++..+|+.||++|+||. .||++++.+||||||. |+|+|..++.....
T Consensus 280 --~~V~~~-G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G~-----------------PVV~t~~~~~~i~~ 337 (397)
T TIGR03087 280 --PGVTVT-GSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMAK-----------------PVVASPEAAEGIDA 337 (397)
T ss_pred --CCeEEe-eecC--CHHHHHHhCCEEEecccccCCcccHHHHHHHcCC-----------------CEEecCcccccccc
Confidence 136654 5665 68999999999999996 6999999999999986 89999864322111
Q ss_pred --cCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHh-hCCHHHHHHHHHHHHH
Q 004314 489 --SGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVS-THDVAYWARSFFQDME 545 (761)
Q Consensus 489 --~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~Wa~~~l~~l~ 545 (761)
..++++. .|++++|++|.++++++ +.++.+.++.++++. .+++...++++.+-+.
T Consensus 338 ~~~~g~lv~-~~~~~la~ai~~ll~~~-~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 338 LPGAELLVA-ADPADFAAAILALLANP-AEREELGQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred cCCcceEeC-CCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 2378886 89999999999999864 356666777888884 6899998888766553
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.76 E-value=8.3e-17 Score=174.12 Aligned_cols=240 Identities=16% Similarity=0.100 Sum_probs=162.4
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcC
Q 004314 201 DDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLG 280 (761)
Q Consensus 201 ~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg 280 (761)
-|+|++|+....++ + .+..+.++.+++|..++.... .........+.+-+-+....+.+.
T Consensus 88 ~Divh~~~~~~~~~---~-~~~~~~~~v~~~h~~~~~~~~--------~~~~~~~~~~~~~~~s~~~~~~~~-------- 147 (335)
T cd03802 88 FDIVHNHSLHLPLP---F-ARPLPVPVVTTLHGPPDPELL--------KLYYAARPDVPFVSISDAQRRPWP-------- 147 (335)
T ss_pred CCEEEecCcccchh---h-hcccCCCEEEEecCCCCcccc--------hHHHhhCcCCeEEEecHHHHhhcc--------
Confidence 38999999887766 2 234578899999987643211 122333444444433332221110
Q ss_pred ceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHHHHHHH
Q 004314 281 LEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEH 360 (761)
Q Consensus 281 ~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ 360 (761)
.. .++.++|+|||++.|.+. ..++.+++++||+.+.||+..+++|+.+
T Consensus 148 ---------------~~-~~~~vi~ngvd~~~~~~~----------------~~~~~~i~~~Gr~~~~Kg~~~li~~~~~ 195 (335)
T cd03802 148 ---------------PL-PWVATVHNGIDLDDYPFR----------------GPKGDYLLFLGRISPEKGPHLAIRAARR 195 (335)
T ss_pred ---------------cc-cccEEecCCcChhhCCCC----------------CCCCCEEEEEEeeccccCHHHHHHHHHh
Confidence 00 367789999999888641 1345689999999999999999998754
Q ss_pred HHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecc
Q 004314 361 LLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTA 440 (761)
Q Consensus 361 ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS 440 (761)
+++ .|+++|.. ++...+...+.+... ++ ..|.|. |.++.+++..+|+.||++|+||
T Consensus 196 -----~~~----~l~i~G~~-----~~~~~~~~~~~~~~~-~~--------~~v~~~-G~~~~~~~~~~~~~~d~~v~ps 251 (335)
T cd03802 196 -----AGI----PLKLAGPV-----SDPDYFYREIAPELL-DG--------PDIEYL-GEVGGAEKAELLGNARALLFPI 251 (335)
T ss_pred -----cCC----eEEEEeCC-----CCHHHHHHHHHHhcc-cC--------CcEEEe-CCCCHHHHHHHHHhCcEEEeCC
Confidence 333 48877742 222222222222211 11 136655 6899999999999999999999
Q ss_pred c-ccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCHHHHHHHHHHHHcCCHHH
Q 004314 441 V-RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAIQMNEAE 516 (761)
Q Consensus 441 ~-~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~~e 516 (761)
. .||||++++||||||. |+|+|+.+|..+.+. +|+++++ +++++++|.+++.++.+
T Consensus 252 ~~~E~~~~~~lEAma~G~-----------------PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~~~~~~- 311 (335)
T cd03802 252 LWEEPFGLVMIEAMACGT-----------------PVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARADRLDRA- 311 (335)
T ss_pred cccCCcchHHHHHHhcCC-----------------CEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHhccHHH-
Confidence 7 5999999999999976 999999999998884 4889987 99999999998765431
Q ss_pred HHHHHHHHhhHH-hhCCHHHHHHHHHH
Q 004314 517 KQLRHEKHYRYV-STHDVAYWARSFFQ 542 (761)
Q Consensus 517 r~~r~~~~~~~v-~~~~~~~Wa~~~l~ 542 (761)
+.++.+ .++++..-++++++
T Consensus 312 ------~~~~~~~~~~s~~~~~~~~~~ 332 (335)
T cd03802 312 ------ACRRRAERRFSAARMVDDYLA 332 (335)
T ss_pred ------HHHHHHHHhCCHHHHHHHHHH
Confidence 122223 45666666666554
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.9e-16 Score=173.16 Aligned_cols=265 Identities=14% Similarity=0.032 Sum_probs=173.8
Q ss_pred CEEEEeCCccc--hHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHH-----HHhhhcCEEeeeCHHHHHHHHHH
Q 004314 202 DYVWIHDYHLM--VLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEIL-----KALLNADLIGFHTFDYARHFLSC 274 (761)
Q Consensus 202 DiVwvhDyhl~--llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il-----~~ll~~DligF~t~~~~~~Fl~~ 274 (761)
|+++||..... .+..++++ .+.++.+.+|..-.....+.. ....++ ..+..+|.|.+.+....+.+..
T Consensus 86 ~~~~i~~~~~~~~~~~~~~~~--~~~~~v~~~h~~~~~~~~~~~--~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~- 160 (363)
T cd04955 86 DIDHVHALGPAIAPFLPLLRL--KGKKVVVNMDGLEWKRAKWGR--PAKRYLKFGEKLAVKFADRLIADSPGIKEYLKE- 160 (363)
T ss_pred CeEEEEecCccHHHHHHHHHh--cCCCEEEEccCcceeeccccc--chhHHHHHHHHHHHhhccEEEeCCHHHHHHHHH-
Confidence 56666654433 33233333 367888888853111111110 111111 1245688888877655544421
Q ss_pred HhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc--CCCeEEEeecCccccCChH
Q 004314 275 CSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF--EGKTVLLGVDDMDIFKGVD 352 (761)
Q Consensus 275 ~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~--~~~~vil~VdRld~~KGi~ 352 (761)
..+ .. . .++|+|+|...+.+. ...++.+ .+++.++++||+.+.||+.
T Consensus 161 ---~~~---------------~~-~--~~i~ngv~~~~~~~~----------~~~~~~~~~~~~~~i~~~G~~~~~Kg~~ 209 (363)
T cd04955 161 ---KYG---------------RD-S--TYIPYGADHVVSSEE----------DEILKKYGLEPGRYYLLVGRIVPENNID 209 (363)
T ss_pred ---hcC---------------CC-C--eeeCCCcChhhcchh----------hhhHHhcCCCCCcEEEEEecccccCCHH
Confidence 111 11 1 679999998776430 1112222 4556788999999999999
Q ss_pred HHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHh
Q 004314 353 LKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTI 432 (761)
Q Consensus 353 ~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ 432 (761)
.+++|+.++.. ++.|+++|... +..++.+.+.+ +. +. ...|++ .+.++.+++..+|+.
T Consensus 210 ~li~a~~~l~~-------~~~l~ivG~~~-----~~~~~~~~~~~---~~----~~--~~~V~~-~g~~~~~~~~~~~~~ 267 (363)
T cd04955 210 DLIEAFSKSNS-------GKKLVIVGNAD-----HNTPYGKLLKE---KA----AA--DPRIIF-VGPIYDQELLELLRY 267 (363)
T ss_pred HHHHHHHhhcc-------CceEEEEcCCC-----CcchHHHHHHH---Hh----CC--CCcEEE-ccccChHHHHHHHHh
Confidence 99999987632 34588888432 22233333332 11 11 123665 578999999999999
Q ss_pred cccceecccc-cCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc-CcEEECCCCHHHHHHHHHHHH
Q 004314 433 AECVVVTAVR-DGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-GAIRVNPWNIEATAEAMHEAI 510 (761)
Q Consensus 433 ADv~vvtS~~-EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~al~VnP~d~~~~A~ai~~aL 510 (761)
||++++||.. ||||++++|||+||. |+|+|..+|..+.+. ++..++|.|. +|++|.+++
T Consensus 268 ad~~v~ps~~~e~~~~~~~EAma~G~-----------------PvI~s~~~~~~e~~~~~g~~~~~~~~--l~~~i~~l~ 328 (363)
T cd04955 268 AALFYLHGHSVGGTNPSLLEAMAYGC-----------------PVLASDNPFNREVLGDKAIYFKVGDD--LASLLEELE 328 (363)
T ss_pred CCEEEeCCccCCCCChHHHHHHHcCC-----------------CEEEecCCccceeecCCeeEecCchH--HHHHHHHHH
Confidence 9999999999 999999999999976 999999998888774 5888888776 999999999
Q ss_pred cCCHHHHHHHHHHHhhHHhh-CCHHHHHHHHHHHH
Q 004314 511 QMNEAEKQLRHEKHYRYVST-HDVAYWARSFFQDM 544 (761)
Q Consensus 511 ~m~~~er~~r~~~~~~~v~~-~~~~~Wa~~~l~~l 544 (761)
++++ .+....++.++++.+ +++..-++++++.+
T Consensus 329 ~~~~-~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y 362 (363)
T cd04955 329 ADPE-EVSAMAKAARERIREKYTWEKIADQYEELY 362 (363)
T ss_pred hCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 9873 445555666777654 78888777776543
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.3e-16 Score=174.97 Aligned_cols=196 Identities=17% Similarity=0.198 Sum_probs=143.9
Q ss_pred hhhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc
Q 004314 254 LLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF 333 (761)
Q Consensus 254 ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~ 333 (761)
+..+|.+...+....+.+... .+ . ...++|+|+|.+.|.+..
T Consensus 151 ~~~~d~ii~~S~~~~~~~~~~----~~----------------~--~~~vi~~~~d~~~~~~~~---------------- 192 (351)
T cd03804 151 AARVDYFIANSRFVARRIKKY----YG----------------R--DATVIYPPVDTDRFTPAE---------------- 192 (351)
T ss_pred hcCCCEEEECCHHHHHHHHHH----hC----------------C--CcEEECCCCCHhhcCcCC----------------
Confidence 457788888877666665321 11 1 235688999988775321
Q ss_pred CCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCcc
Q 004314 334 EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEP 413 (761)
Q Consensus 334 ~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~p 413 (761)
..+++++++||+.+.||+..+++|++++ | ++ |+++|. +++.+++++ .. ...
T Consensus 193 ~~~~~il~~G~~~~~K~~~~li~a~~~~----~-~~----l~ivG~-----g~~~~~l~~-------~~--------~~~ 243 (351)
T cd03804 193 EKEDYYLSVGRLVPYKRIDLAIEAFNKL----G-KR----LVVIGD-----GPELDRLRA-------KA--------GPN 243 (351)
T ss_pred CCCCEEEEEEcCccccChHHHHHHHHHC----C-Cc----EEEEEC-----ChhHHHHHh-------hc--------CCC
Confidence 2345799999999999999999999865 3 33 777773 444333322 11 124
Q ss_pred EEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---C
Q 004314 414 VVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---G 490 (761)
Q Consensus 414 V~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ 490 (761)
|.|+ +.++.+++.++|+.||++++||. ||||++++|||+||. |+|+|..+|..+.+. .
T Consensus 244 V~~~-g~~~~~~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G~-----------------Pvi~~~~~~~~e~i~~~~~ 304 (351)
T cd03804 244 VTFL-GRVSDEELRDLYARARAFLFPAE-EDFGIVPVEAMASGT-----------------PVIAYGKGGALETVIDGVT 304 (351)
T ss_pred EEEe-cCCCHHHHHHHHHhCCEEEECCc-CCCCchHHHHHHcCC-----------------CEEEeCCCCCcceeeCCCC
Confidence 7765 68999999999999999999999 999999999999976 999999999888773 4
Q ss_pred cEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHH
Q 004314 491 AIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARS 539 (761)
Q Consensus 491 al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~ 539 (761)
|++++|.|++++|++|..++++++ + ..+.+++.+.++++.+..++
T Consensus 305 G~~~~~~~~~~la~~i~~l~~~~~-~---~~~~~~~~~~~~~~~~~~~~ 349 (351)
T cd03804 305 GILFEEQTVESLAAAVERFEKNED-F---DPQAIRAHAERFSESRFREK 349 (351)
T ss_pred EEEeCCCCHHHHHHHHHHHHhCcc-c---CHHHHHHHHHhcCHHHHHHH
Confidence 899999999999999999999874 1 12234444555555555443
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.75 E-value=9.8e-17 Score=171.65 Aligned_cols=245 Identities=22% Similarity=0.192 Sum_probs=167.0
Q ss_pred hCCCCCEEEEeCC-ccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHHH
Q 004314 197 INPEDDYVWIHDY-HLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCC 275 (761)
Q Consensus 197 ~~~~~DiVwvhDy-hl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~ 275 (761)
.++ |+|++|++ ...++..+. .+. +.++.+..|..++.... ...+........+..+|.+.+.+....+.+....
T Consensus 80 ~~~--dii~~~~~~~~~~~~~~~-~~~-~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~ 154 (353)
T cd03811 80 EKP--DVVISHLTTTPNVLALLA-ARL-GTKLIVWEHNSLSLELK-RKLRLLLLIRKLYRRADKIVAVSEGVKEDLLKLL 154 (353)
T ss_pred cCC--CEEEEcCccchhHHHHHH-hhc-CCceEEEEcCcchhhhc-cchhHHHHHHhhccccceEEEeccchhhhHHHhh
Confidence 355 89999998 444444443 333 78999999988764321 1111111223345678888888777666554311
Q ss_pred hhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHH
Q 004314 276 SRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKL 355 (761)
Q Consensus 276 ~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l 355 (761)
+ ....++.++|+|+|...+.+.... . ..+ ....++.+++++||+++.||+..++
T Consensus 155 ----~---------------~~~~~~~vi~~~~~~~~~~~~~~~-----~-~~~-~~~~~~~~i~~~g~~~~~k~~~~~i 208 (353)
T cd03811 155 ----G---------------IPPDKIEVIYNPIDIEEIRALAEE-----P-LEL-GIPPDGPVILAVGRLSPQKGFDTLI 208 (353)
T ss_pred ----c---------------CCccccEEecCCcChhhcCcccch-----h-hhc-CCCCCceEEEEEecchhhcChHHHH
Confidence 1 013467889999999877643211 0 000 1125678999999999999999999
Q ss_pred HHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhccc
Q 004314 356 LAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAEC 435 (761)
Q Consensus 356 ~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv 435 (761)
+|+.++.+++++++ |+++|. ++...+ +.+++.+.+.. ..|.+. +. .+++..+|+.||+
T Consensus 209 ~~~~~l~~~~~~~~----l~i~G~-----~~~~~~----~~~~~~~~~~~------~~v~~~-g~--~~~~~~~~~~~d~ 266 (353)
T cd03811 209 RAFALLRKEGPDAR----LVILGD-----GPLREE----LEALAKELGLA------DRVHFL-GF--QSNPYPYLKAADL 266 (353)
T ss_pred HHHHHhhhcCCCce----EEEEcC-----CccHHH----HHHHHHhcCCC------ccEEEe-cc--cCCHHHHHHhCCE
Confidence 99999988777655 887773 333333 33444444321 135554 44 3568899999999
Q ss_pred ceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCHHHHHHHHHHHHc
Q 004314 436 VVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAIQ 511 (761)
Q Consensus 436 ~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~ 511 (761)
++.||..||||++++|||+||. |+|+|+.+|..+.+. .|+++++.|.+++++++..+..
T Consensus 267 ~i~ps~~e~~~~~~~Ea~~~G~-----------------PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~ 328 (353)
T cd03811 267 FVLSSRYEGFPNVLLEAMALGT-----------------PVVATDCPGPREILEDGENGLLVPVGDEAALAAAALALLD 328 (353)
T ss_pred EEeCcccCCCCcHHHHHHHhCC-----------------CEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHHHh
Confidence 9999999999999999999976 999999999888874 4899999999999544444443
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.8e-16 Score=173.25 Aligned_cols=194 Identities=18% Similarity=0.226 Sum_probs=144.0
Q ss_pred EEEEEeccccCcccchhhhccchHHHHHHHHHHHc---CCCeEEEeecCccc--cCChHHHHHHHHHHHHh-CCCCcCce
Q 004314 299 VGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDI--FKGVDLKLLAMEHLLKQ-HPKWQGRA 372 (761)
Q Consensus 299 ~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~--~KGi~~~l~A~~~ll~~-~P~~~~~v 372 (761)
.++.++|+|||.+.|.+... ...++.+ .++.+++.+++... .||+..+++|++.+.++ .|+ +
T Consensus 159 ~~~~vi~ngi~~~~~~~~~~--------~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~----~ 226 (365)
T cd03825 159 IPIEVIPNGIDTTIFRPRDK--------REARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKDD----I 226 (365)
T ss_pred CceEEeCCCCcccccCCCcH--------HHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCCC----e
Confidence 36789999999988854311 1223333 34566666666544 99999999999988665 344 4
Q ss_pred eEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCC-HHHHHHHHHhcccceecccccCCCcchhh
Q 004314 373 VLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVT-LSERAAYYTIAECVVVTAVRDGMNLTPYE 451 (761)
Q Consensus 373 vLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~-~~el~aly~~ADv~vvtS~~EGmnLv~~E 451 (761)
.++++|.. +.... . ..+ ..|.++ +.++ .+++..+|+.||++++||..||||++++|
T Consensus 227 ~~~i~G~~-----~~~~~------~---~~~--------~~v~~~-g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~E 283 (365)
T cd03825 227 ELVVFGAS-----DPEIP------P---DLP--------FPVHYL-GSLNDDESLALIYSAADVFVVPSLQENFPNTAIE 283 (365)
T ss_pred EEEEeCCC-----chhhh------c---cCC--------CceEec-CCcCCHHHHHHHHHhCCEEEeccccccccHHHHH
Confidence 58777742 11100 0 111 135544 5777 88999999999999999999999999999
Q ss_pred heeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHH
Q 004314 452 YIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYV 528 (761)
Q Consensus 452 ama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v 528 (761)
||+||. |+|+|..+|..+.+. .|+++++.|++++|++|.+++..++ ++..+.++.++++
T Consensus 284 am~~g~-----------------PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~~-~~~~~~~~~~~~~ 345 (365)
T cd03825 284 ALACGT-----------------PVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADPD-EREELGEAARELA 345 (365)
T ss_pred HHhcCC-----------------CEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHH
Confidence 999976 899999988888873 4899999999999999999998653 4555566677777
Q ss_pred h-hCCHHHHHHHHHHHHH
Q 004314 529 S-THDVAYWARSFFQDME 545 (761)
Q Consensus 529 ~-~~~~~~Wa~~~l~~l~ 545 (761)
. .+++...++++++-++
T Consensus 346 ~~~~s~~~~~~~~~~~y~ 363 (365)
T cd03825 346 ENEFDSRVQAKRYLSLYE 363 (365)
T ss_pred HHhcCHHHHHHHHHHHHh
Confidence 4 5888898888887654
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.2e-16 Score=174.14 Aligned_cols=236 Identities=10% Similarity=0.003 Sum_probs=156.9
Q ss_pred CEEEEeCCccch--HHHHHHHhcCCCeEEEEEecCCCchhHHhc-C---cc----hHHHHHHh-hhcCEEeeeCHHHHHH
Q 004314 202 DYVWIHDYHLMV--LPTFLRRRFTRLRMGFFLHSPFPSSEIYRT-L---PV----REEILKAL-LNADLIGFHTFDYARH 270 (761)
Q Consensus 202 DiVwvhDyhl~l--lp~~lr~~~~~~~ig~flH~PfP~~e~fr~-l---p~----r~~il~~l-l~~DligF~t~~~~~~ 270 (761)
|+|++|..+.+. ++..+-.+..++|+.+.+|..+.+ .+.. . +. ...+.+.+ -.+|.|...+....+.
T Consensus 102 DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~--~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~S~~~~~~ 179 (371)
T PLN02275 102 DVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYT--LLALSLGRSHPLVRLYRWYERHYGKMADGHLCVTKAMQHE 179 (371)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHH--HHhcccCCCCHHHHHHHHHHHHHHhhCCEEEECCHHHHHH
Confidence 899999977532 233333334568898899975421 1100 0 10 11111222 3478888777766555
Q ss_pred HHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCC
Q 004314 271 FLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKG 350 (761)
Q Consensus 271 Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KG 350 (761)
..+ ..| . .+.++|+|+ .+.|.+... . ..++ .+...++++++|+.+.||
T Consensus 180 l~~----~~g----------------~--~i~vi~n~~-~~~f~~~~~-----~--~~~~--~~~~~~i~~~grl~~~k~ 227 (371)
T PLN02275 180 LDQ----NWG----------------I--RATVLYDQP-PEFFRPASL-----E--IRLR--PNRPALVVSSTSWTPDED 227 (371)
T ss_pred HHH----hcC----------------C--CeEEECCCC-HHHcCcCCc-----h--hccc--CCCcEEEEEeCceeccCC
Confidence 432 011 1 156788884 466654211 0 1111 134567889999999999
Q ss_pred hHHHHHHHHHHHH-----------------hCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCcc
Q 004314 351 VDLKLLAMEHLLK-----------------QHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEP 413 (761)
Q Consensus 351 i~~~l~A~~~ll~-----------------~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~p 413 (761)
+..+++|+..+.. ++|+ +.|+++| +|++.++++ +.+++.+ ...
T Consensus 228 ~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~----i~l~ivG-----~G~~~~~l~----~~~~~~~-------l~~ 287 (371)
T PLN02275 228 FGILLEAAVMYDRRVAARLNESDSASGKQSLYPR----LLFIITG-----KGPQKAMYE----EKISRLN-------LRH 287 (371)
T ss_pred HHHHHHHHHHHHhhhhhccccccccccccccCCC----eEEEEEe-----CCCCHHHHH----HHHHHcC-------CCc
Confidence 9999999988742 3455 4588888 456554444 4444433 235
Q ss_pred EEEEcCCCCHHHHHHHHHhcccceecc---cccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc-
Q 004314 414 VVFIDKPVTLSERAAYYTIAECVVVTA---VRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS- 489 (761)
Q Consensus 414 V~~~~~~v~~~el~aly~~ADv~vvtS---~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~- 489 (761)
|+++.+.++.++++.+|+.||+||+++ ..|||+++.+||||||. |+|+|..+|..+.+.
T Consensus 288 v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~-----------------PVVa~~~gg~~eiv~~ 350 (371)
T PLN02275 288 VAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGL-----------------PVCAVSYSCIGELVKD 350 (371)
T ss_pred eEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCC-----------------CEEEecCCChHHHccC
Confidence 788877889999999999999999753 24899999999999986 999999988888873
Q ss_pred --CcEEECCCCHHHHHHHHHHHH
Q 004314 490 --GAIRVNPWNIEATAEAMHEAI 510 (761)
Q Consensus 490 --~al~VnP~d~~~~A~ai~~aL 510 (761)
.|++|+ |++++|++|.++|
T Consensus 351 g~~G~lv~--~~~~la~~i~~l~ 371 (371)
T PLN02275 351 GKNGLLFS--SSSELADQLLELL 371 (371)
T ss_pred CCCeEEEC--CHHHHHHHHHHhC
Confidence 488886 6999999998764
|
|
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.5e-15 Score=171.67 Aligned_cols=285 Identities=18% Similarity=0.198 Sum_probs=178.2
Q ss_pred HHHHHHhCCCCCEEEEeCCccchHHHHHHH-hcCCCeEEEEEecCCCc-hhHHhcCcchHHHHHHhh-hcCEEeeeCHHH
Q 004314 191 QRVIEVINPEDDYVWIHDYHLMVLPTFLRR-RFTRLRMGFFLHSPFPS-SEIYRTLPVREEILKALL-NADLIGFHTFDY 267 (761)
Q Consensus 191 ~~i~~~~~~~~DiVwvhDyhl~llp~~lr~-~~~~~~ig~flH~PfP~-~e~fr~lp~r~~il~~ll-~~DligF~t~~~ 267 (761)
.++++..+| |+|++|.+.++ |.+++. +..++++.+.-|...+. ...++.+ ..+.+.++ .+|.|..++...
T Consensus 117 ~~~l~~~~P--d~v~~~~~~~~--~~~l~~~~~~~ip~vl~~~~~~~~s~~~~~~~---~~~~r~~~~~~d~ii~~S~~~ 189 (425)
T PRK05749 117 RRFLRFWRP--KLVIIMETELW--PNLIAELKRRGIPLVLANARLSERSFKRYQKF---KRFYRLLFKNIDLVLAQSEED 189 (425)
T ss_pred HHHHHhhCC--CEEEEEecchh--HHHHHHHHHCCCCEEEEeccCChhhHHHHHHH---HHHHHHHHHhCCEEEECCHHH
Confidence 345666787 79999987754 444433 23467777655543222 1222211 22334433 479999999988
Q ss_pred HHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc-CCCeEEEeecCcc
Q 004314 268 ARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF-EGKTVLLGVDDMD 346 (761)
Q Consensus 268 ~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VdRld 346 (761)
.+.|.+ +|. ... +.++|++ +.+.+... ........+++++ +++++++++++.
T Consensus 190 ~~~l~~-----~g~---------------~~~-i~vi~n~-~~d~~~~~----~~~~~~~~~r~~~~~~~~vil~~~~~- 242 (425)
T PRK05749 190 AERFLA-----LGA---------------KNE-VTVTGNL-KFDIEVPP----ELAARAATLRRQLAPNRPVWIAASTH- 242 (425)
T ss_pred HHHHHH-----cCC---------------CCC-cEecccc-cccCCCCh----hhHHHHHHHHHHhcCCCcEEEEeCCC-
Confidence 877753 232 112 4455653 33322211 1112234566667 678889998875
Q ss_pred ccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcc---cCC---C-CCccEEEEcC
Q 004314 347 IFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINET---FGR---P-GYEPVVFIDK 419 (761)
Q Consensus 347 ~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~---~g~---~-~~~pV~~~~~ 419 (761)
.|+...+++|+.++++++|+++ |+++| ++++. .+++.+++++.+-. +.. . .-..|. +.+
T Consensus 243 -~~~~~~ll~A~~~l~~~~~~~~----liivG-----~g~~r---~~~l~~~~~~~gl~~~~~~~~~~~~~~~~v~-l~~ 308 (425)
T PRK05749 243 -EGEEELVLDAHRALLKQFPNLL----LILVP-----RHPER---FKEVEELLKKAGLSYVRRSQGEPPSADTDVL-LGD 308 (425)
T ss_pred -chHHHHHHHHHHHHHHhCCCcE----EEEcC-----CChhh---HHHHHHHHHhCCCcEEEccCCCCCCCCCcEE-EEe
Confidence 6889999999999988899865 77765 34442 12344444443321 100 0 001233 322
Q ss_pred CCCHHHHHHHHHhccccee-cccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccc----c-cCcEE
Q 004314 420 PVTLSERAAYYTIAECVVV-TAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPS----L-SGAIR 493 (761)
Q Consensus 420 ~v~~~el~aly~~ADv~vv-tS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~----l-~~al~ 493 (761)
+..|+..+|+.||++++ +|..||+|++++|||+||. |+|++...|.... + .+|.+
T Consensus 309 --~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~-----------------PVI~g~~~~~~~e~~~~~~~~g~~ 369 (425)
T PRK05749 309 --TMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGV-----------------PVISGPHTFNFKEIFERLLQAGAA 369 (425)
T ss_pred --cHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCC-----------------CEEECCCccCHHHHHHHHHHCCCe
Confidence 36799999999999666 7888999999999999976 8888766443322 2 35778
Q ss_pred ECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHHHHH
Q 004314 494 VNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDME 545 (761)
Q Consensus 494 VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l~ 545 (761)
+.|.|++++|++|.++++++ +.++.+.++.++++.++ ..=++++++.+.
T Consensus 370 ~~~~d~~~La~~l~~ll~~~-~~~~~m~~~a~~~~~~~--~~~~~~~~~~l~ 418 (425)
T PRK05749 370 IQVEDAEDLAKAVTYLLTDP-DARQAYGEAGVAFLKQN--QGALQRTLQLLE 418 (425)
T ss_pred EEECCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHhC--ccHHHHHHHHHH
Confidence 88999999999999999864 45666777788888776 233344444444
|
|
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.69 E-value=4.5e-15 Score=167.46 Aligned_cols=297 Identities=20% Similarity=0.222 Sum_probs=200.2
Q ss_pred CCEEEEeCCccchHHHHHHHh---cCCCeEEEEEecC-----CC-chhHHhcCcc---h---------HHHH-HHhhhcC
Q 004314 201 DDYVWIHDYHLMVLPTFLRRR---FTRLRMGFFLHSP-----FP-SSEIYRTLPV---R---------EEIL-KALLNAD 258 (761)
Q Consensus 201 ~DiVwvhDyhl~llp~~lr~~---~~~~~ig~flH~P-----fP-~~e~fr~lp~---r---------~~il-~~ll~~D 258 (761)
.|||++||||+.|+|.++++. ...++.+|+.|.- |+ .....-.||. . -..+ -++..||
T Consensus 131 pDIvH~hDWqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad 210 (487)
T COG0297 131 PDIVHAHDWQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYAD 210 (487)
T ss_pred CCEEEeecHHHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheecc
Confidence 389999999999999999997 6789999999953 33 1111223441 0 0223 3466788
Q ss_pred EEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhcc-----------chHHHHHH
Q 004314 259 LIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRL-----------ADKDWRVQ 327 (761)
Q Consensus 259 ligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~-----------~~~~~~~~ 327 (761)
.|.--++.|+..... ...|-. -.|. +.+ +.-++.-+=+|||.+...+.... +...+...
T Consensus 211 ~vttVSptYa~Ei~t---~~~g~g---l~g~--l~~--~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~ 280 (487)
T COG0297 211 AVTTVSPTYAGEIYT---PEYGEG---LEGL--LSW--RSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKV 280 (487)
T ss_pred EEEEECHHHHHhhcc---cccccc---chhh--hhh--ccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHH
Confidence 888888888766541 101100 0010 111 11345555678887766542110 11222334
Q ss_pred HHHHHc--C---CCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHH
Q 004314 328 ELKQQF--E---GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRI 402 (761)
Q Consensus 328 ~lr~~~--~---~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~i 402 (761)
.|++.+ + +.+++..|+|++..||++.+++|+..++++. ++ ||++|. + + ..+++.+..+++++
T Consensus 281 ~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~----~vilG~-----g-d-~~le~~~~~la~~~ 347 (487)
T COG0297 281 ALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQ----LVLLGT-----G-D-PELEEALRALASRH 347 (487)
T ss_pred HHHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ce----EEEEec-----C-c-HHHHHHHHHHHHhc
Confidence 566666 2 5689999999999999999999999999987 55 777774 2 2 46778888998887
Q ss_pred hcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCC
Q 004314 403 NETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFI 482 (761)
Q Consensus 403 n~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~ 482 (761)
..++ .+.-..+..-...+|+.||++++||..|++||+-+++|.-|+ ++|+++.+
T Consensus 348 ~~~~---------~~~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amryGt-----------------vpIv~~tG 401 (487)
T COG0297 348 PGRV---------LVVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYGT-----------------LPIVRETG 401 (487)
T ss_pred CceE---------EEEeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcCC-----------------cceEcccC
Confidence 6432 222245677788899999999999999999999999999865 88999999
Q ss_pred CCccccc-----------CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHH--hhCCHHHHHHHHHHHHHHH
Q 004314 483 GCSPSLS-----------GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYV--STHDVAYWARSFFQDMERT 547 (761)
Q Consensus 483 G~~~~l~-----------~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v--~~~~~~~Wa~~~l~~l~~~ 547 (761)
|.++.+. .|+++.|.|+++++.||.+|+..-..... -+++..... ..+++..=+.+++.--+..
T Consensus 402 GLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~-~w~~~~~~~m~~d~sw~~sa~~y~~lY~~~ 478 (487)
T COG0297 402 GLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALVLYRAPPL-LWRKVQPNAMGADFSWDLSAKEYVELYKPL 478 (487)
T ss_pred CccceecCccchhccCceeEEEEecCCHHHHHHHHHHHHHHhhCCHH-HHHHHHHhhcccccCchhHHHHHHHHHHHH
Confidence 9998873 27888888999999999999975432211 022222222 3455566666666554443
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.5e-16 Score=159.00 Aligned_cols=158 Identities=22% Similarity=0.267 Sum_probs=118.3
Q ss_pred eEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCCCceEEccCCeEEeecCCcceee
Q 004314 593 AILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQN 672 (761)
Q Consensus 593 lI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~~l~liaehGa~ir~~~~~~w~~ 672 (761)
+|++||||||++.. ...++++++++|++|+++ +..|+|+|||+...+.+++..+ +.+++++||++++.+++..|..
T Consensus 1 li~~D~DgTL~~~~--~~~~~~~~~~~l~~l~~~-g~~~~i~TGR~~~~~~~~~~~~-~~~~i~~nGa~i~~~~~~~~~~ 76 (204)
T TIGR01484 1 LLFFDLDGTLLDPN--AHELSPETIEALERLREA-GVKVVLVTGRSLAEIKELLKQL-PLPLIAENGALIFYPGEILYIE 76 (204)
T ss_pred CEEEeCcCCCcCCC--CCcCCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHhC-CCCEEECCCcEEEECCEEEEEc
Confidence 68999999999832 256889999999999975 6999999999999999999874 4789999999999876555553
Q ss_pred cCcCcCcchHHH------HHHHHHHHhcCCCccEEEecCceEEEEcccCCCCCchHHHHHHHHHHHHHhcC-CCcEEE-e
Q 004314 673 CGQSVDFGWIQI------AEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLAN-EPAAVK-S 744 (761)
Q Consensus 673 ~~~~~~~~w~~~------v~~im~~y~~~t~Gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~-~~v~V~-~ 744 (761)
....|... +..++..+.+.++|..+|.+...+.+||++.. .......++.+.++....+ ..+.+. +
T Consensus 77 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~s 150 (204)
T TIGR01484 77 ----PSDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAIHYVGAE--LGQELDSKMRERLEKIGRNDLELEAIYV 150 (204)
T ss_pred ----ccccHHHHHHhhhhcCceeeeeccccccceeecccceeeEEEeccc--hhhHHHHHHHHHHHhhccccCcEEEEEe
Confidence 11223322 23344455567789999999999999998761 1123344556666554221 457777 7
Q ss_pred CCeEEEEEeCCCCcCC
Q 004314 745 GQFIVEVKPQVYIQLR 760 (761)
Q Consensus 745 G~~~vEV~p~gvnKG~ 760 (761)
|..++||+|+++|||.
T Consensus 151 ~~~~~ev~p~~~~K~~ 166 (204)
T TIGR01484 151 GKTDLEVLPAGVDKGS 166 (204)
T ss_pred cCCEEEEecCCCChHH
Confidence 9999999999999985
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.7e-15 Score=148.96 Aligned_cols=154 Identities=21% Similarity=0.371 Sum_probs=117.7
Q ss_pred CCCeEEEeecCccccCChHHHHHHHHHHHHh-CCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCc
Q 004314 334 EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQ-HPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYE 412 (761)
Q Consensus 334 ~~~~vil~VdRld~~KGi~~~l~A~~~ll~~-~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~ 412 (761)
.++++|++++|+++.||+..+++|+..+.++ .|++. |+++|. ++.. ..+..++...+.. .
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~----l~i~G~-----~~~~----~~~~~~~~~~~~~------~ 73 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYK----LVIVGD-----GEYK----KELKNLIEKLNLK------E 73 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEE----EEEESH-----CCHH----HHHHHHHHHTTCG------T
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeE----EEEEcc-----cccc----ccccccccccccc------c
Confidence 5789999999999999999999999999875 66554 877762 2222 3344444443321 2
Q ss_pred cEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---
Q 004314 413 PVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS--- 489 (761)
Q Consensus 413 pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--- 489 (761)
.|.++. .++.+++.++|+.||++|.||..||+|++++|||+||. |+|+|..+|..+.+.
T Consensus 74 ~i~~~~-~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~-----------------pvI~~~~~~~~e~~~~~~ 135 (172)
T PF00534_consen 74 NIIFLG-YVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGC-----------------PVIASDIGGNNEIINDGV 135 (172)
T ss_dssp TEEEEE-SHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT------------------EEEEESSTHHHHHSGTTT
T ss_pred cccccc-cccccccccccccceecccccccccccccccccccccc-----------------ceeeccccCCceeecccc
Confidence 477664 66789999999999999999999999999999999975 999999888877773
Q ss_pred CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHh
Q 004314 490 GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHY 525 (761)
Q Consensus 490 ~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~ 525 (761)
.|++++|.|+++++++|.+++.++ +.++...++.+
T Consensus 136 ~g~~~~~~~~~~l~~~i~~~l~~~-~~~~~l~~~~~ 170 (172)
T PF00534_consen 136 NGFLFDPNDIEELADAIEKLLNDP-ELRQKLGKNAR 170 (172)
T ss_dssp SEEEESTTSHHHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_pred ceEEeCCCCHHHHHHHHHHHHCCH-HHHHHHHHHhc
Confidence 379999999999999999999976 33333333333
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.7e-14 Score=151.51 Aligned_cols=240 Identities=17% Similarity=0.179 Sum_probs=170.5
Q ss_pred EEEEeCCccchHHHHHHH-hcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcCc
Q 004314 203 YVWIHDYHLMVLPTFLRR-RFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGL 281 (761)
Q Consensus 203 iVwvhDyhl~llp~~lr~-~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg~ 281 (761)
+|+-|.-.-.+.-..|+. +....++.|+=|+-|--.++- +.+--.++-|. |...+|.+++
T Consensus 92 ivhghs~fS~lahe~l~hartMGlktVfTdHSlfGfad~~-----------si~~n~ll~~s--------L~~id~~IcV 152 (426)
T KOG1111|consen 92 IVHGHSPFSYLAHEALMHARTMGLKTVFTDHSLFGFADIG-----------SILTNKLLPLS--------LANIDRIICV 152 (426)
T ss_pred EEecCChHHHHHHHHHHHHHhcCceEEEeccccccccchh-----------hhhhcceeeee--------ecCCCcEEEE
Confidence 454444333333333332 234588999999866422221 11111222221 3445677788
Q ss_pred eeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc-CCCeEEEeecCccccCChHHHHHHHHH
Q 004314 282 EYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF-EGKTVLLGVDDMDIFKGVDLKLLAMEH 360 (761)
Q Consensus 282 ~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VdRld~~KGi~~~l~A~~~ 360 (761)
++.++.+.. +.-.-...++.++|+-++...|.|.... +. .+...|+.++||-|.||+++++.++.+
T Consensus 153 shtskentv-lr~~L~p~kvsvIPnAv~~~~f~P~~~~------------~~S~~i~~ivv~sRLvyrKGiDll~~iIp~ 219 (426)
T KOG1111|consen 153 SHTSKENTV-LRGALAPAKVSVIPNAVVTHTFTPDAAD------------KPSADIITIVVASRLVYRKGIDLLLEIIPS 219 (426)
T ss_pred eecCCCceE-EEeccCHhHeeeccceeeccccccCccc------------cCCCCeeEEEEEeeeeeccchHHHHHHHHH
Confidence 888876642 3222334688999999999999885321 22 345789999999999999999999999
Q ss_pred HHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecc
Q 004314 361 LLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTA 440 (761)
Q Consensus 361 ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS 440 (761)
+-++||+.+ ++++| +||....+++.+++. + -..+|+++ |.++++++...|...|||+.||
T Consensus 220 vc~~~p~vr----fii~G-----DGPk~i~lee~lEk~----~------l~~rV~~l-G~v~h~~Vr~vl~~G~IFlntS 279 (426)
T KOG1111|consen 220 VCDKHPEVR----FIIIG-----DGPKRIDLEEMLEKL----F------LQDRVVML-GTVPHDRVRDVLVRGDIFLNTS 279 (426)
T ss_pred HHhcCCCee----EEEec-----CCcccchHHHHHHHh----h------ccCceEEe-cccchHHHHHHHhcCcEEeccH
Confidence 999999987 88776 567554454444433 2 12478865 6899999999999999999999
Q ss_pred cccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcccccCc-EEECCCCHHHHHHHHHHHHc
Q 004314 441 VRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLSGA-IRVNPWNIEATAEAMHEAIQ 511 (761)
Q Consensus 441 ~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~a-l~VnP~d~~~~A~ai~~aL~ 511 (761)
+.|.|+++.+||+.||. ++|.+..+|..+.|... +..-+-.++++++++.+|++
T Consensus 280 lTEafc~~ivEAaScGL-----------------~VVsTrVGGIpeVLP~d~i~~~~~~~~dl~~~v~~ai~ 334 (426)
T KOG1111|consen 280 LTEAFCMVIVEAASCGL-----------------PVVSTRVGGIPEVLPEDMITLGEPGPDDLVGAVEKAIT 334 (426)
T ss_pred HHHHHHHHHHHHHhCCC-----------------EEEEeecCCccccCCccceeccCCChHHHHHHHHHHHH
Confidence 99999999999999986 88999999999999644 43555578888888888886
|
|
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.7e-13 Score=150.79 Aligned_cols=266 Identities=13% Similarity=0.127 Sum_probs=166.7
Q ss_pred CCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHH-HHhhhcCEEeeeCHHHHHHHHHHHh
Q 004314 198 NPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEIL-KALLNADLIGFHTFDYARHFLSCCS 276 (761)
Q Consensus 198 ~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il-~~ll~~DligF~t~~~~~~Fl~~~~ 276 (761)
+.++.++|.+..-...+... .+..++++-+|--|+..... -+....+. ..+-.||+|...+....+++..
T Consensus 100 ~~~~~i~~~~~P~~~~~~~~----~~~~~~Vyd~~D~~~~~~~~--~~~~~~~e~~~~~~ad~vi~~S~~l~~~~~~--- 170 (373)
T cd04950 100 GFGRPILWYYTPYTLPVAAL----LQASLVVYDCVDDLSAFPGG--PPELLEAERRLLKRADLVFTTSPSLYEAKRR--- 170 (373)
T ss_pred CCCCcEEEEeCccHHHHHhh----cCCCeEEEEcccchhccCCC--CHHHHHHHHHHHHhCCEEEECCHHHHHHHhh---
Confidence 44557888886554444333 45667777766545432110 01111112 2245689988877765543321
Q ss_pred hhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHHH
Q 004314 277 RMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLL 356 (761)
Q Consensus 277 r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~ 356 (761)
+ + .++.++|+|+|.+.|.+....+. . .+.+ ...++++++++|+++..+++. +|.
T Consensus 171 -----------------~-~--~~i~~i~ngvd~~~f~~~~~~~~-~--~~~~--~~~~~~~i~y~G~l~~~~d~~-ll~ 224 (373)
T cd04950 171 -----------------L-N--PNVVLVPNGVDYEHFAAARDPPP-P--PADL--AALPRPVIGYYGAIAEWLDLE-LLE 224 (373)
T ss_pred -----------------C-C--CCEEEcccccCHHHhhcccccCC-C--hhHH--hcCCCCEEEEEeccccccCHH-HHH
Confidence 1 1 25678999999999875322111 0 0111 114678999999999966654 333
Q ss_pred HHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccc
Q 004314 357 AMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECV 436 (761)
Q Consensus 357 A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~ 436 (761)
.+.+.+|+++ |++||.. +...+. ..+ . ....|+|+ |.++.++++++|+.||++
T Consensus 225 ---~la~~~p~~~----~vliG~~-----~~~~~~----~~~----~------~~~nV~~~-G~~~~~~l~~~l~~~Dv~ 277 (373)
T cd04950 225 ---ALAKARPDWS----FVLIGPV-----DVSIDP----SAL----L------RLPNVHYL-GPKPYKELPAYLAGFDVA 277 (373)
T ss_pred ---HHHHHCCCCE----EEEECCC-----cCccCh----hHh----c------cCCCEEEe-CCCCHHHHHHHHHhCCEE
Confidence 3445678876 8888742 110010 111 1 01247765 689999999999999999
Q ss_pred eeccc-----ccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcccccCcEEECCCCHHHHHHHHHHHHc
Q 004314 437 VVTAV-----RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQ 511 (761)
Q Consensus 437 vvtS~-----~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~ 511 (761)
++|+. +.++++..+||||||. |+|+|.+..+.+.. ++..+.+.|+++++++|.++|.
T Consensus 278 l~P~~~~~~~~~~~P~Kl~EylA~G~-----------------PVVat~~~~~~~~~-~~~~~~~~d~~~~~~ai~~~l~ 339 (373)
T cd04950 278 ILPFRLNELTRATSPLKLFEYLAAGK-----------------PVVATPLPEVRRYE-DEVVLIADDPEEFVAAIEKALL 339 (373)
T ss_pred ecCCccchhhhcCCcchHHHHhccCC-----------------CEEecCcHHHHhhc-CcEEEeCCCHHHHHHHHHHHHh
Confidence 99986 3578899999999986 89988765544332 3344456699999999999887
Q ss_pred CCHHHHHHHHHHHhhHHhhCCHHHHHHHHHHHHHH
Q 004314 512 MNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMER 546 (761)
Q Consensus 512 m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l~~ 546 (761)
.+..++..+. .+.+++|++..=++.+++.|..
T Consensus 340 ~~~~~~~~~~---~~~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 340 EDGPARERRR---LRLAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred cCCchHHHHH---HHHHHHCCHHHHHHHHHHHHHh
Confidence 6544433322 2268889988888888866653
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.2e-11 Score=138.13 Aligned_cols=191 Identities=16% Similarity=0.180 Sum_probs=125.3
Q ss_pred EEEEeccccCcccchhhhccchHHHHHHHHHHHc---CCCeEEEeecCccccCChHHHHHHHHHHHHh----CCCCcCce
Q 004314 300 GIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQ----HPKWQGRA 372 (761)
Q Consensus 300 ~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi~~~l~A~~~ll~~----~P~~~~~v 372 (761)
+|.+++++|+.+.+.+.. ...++++++ +++++|+.+||....||+...++++..++.. .|+.+
T Consensus 174 ki~v~g~~v~~~f~~~~~-------~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~--- 243 (382)
T PLN02605 174 QIRVYGLPIRPSFARAVR-------PKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQ--- 243 (382)
T ss_pred HEEEECcccCHhhccCCC-------CHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCce---
Confidence 566678888865433211 123456666 4688999999999999999999999876521 23332
Q ss_pred eEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhh
Q 004314 373 VLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEY 452 (761)
Q Consensus 373 vLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea 452 (761)
++.+++ +++ ++++++.+... + ..|.++ |.+ +++..||++||++|.+| .++++.||
T Consensus 244 -~~vi~G----~~~---~~~~~L~~~~~--~--------~~v~~~-G~~--~~~~~l~~aaDv~V~~~----g~~ti~EA 298 (382)
T PLN02605 244 -VVVICG----RNK---KLQSKLESRDW--K--------IPVKVR-GFV--TNMEEWMGACDCIITKA----GPGTIAEA 298 (382)
T ss_pred -EEEEEC----CCH---HHHHHHHhhcc--c--------CCeEEE-ecc--ccHHHHHHhCCEEEECC----CcchHHHH
Confidence 333442 222 23333333210 1 136644 455 47999999999999865 37899999
Q ss_pred eeeecCCCCCCCCCCCCCCCCceEEEcCCC-----CCcccc-cCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhh
Q 004314 453 IVCRQGVSGSESSSESSAPKKSMLVVSEFI-----GCSPSL-SGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYR 526 (761)
Q Consensus 453 ma~~~~~~~~~~~~~~~~~~~g~lV~Se~~-----G~~~~l-~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~ 526 (761)
|+||. |+|++... |.++.+ .++.-+.+.|+++++++|.++|.+.++.++.+.++.++
T Consensus 299 ma~g~-----------------PvI~~~~~pgqe~gn~~~i~~~g~g~~~~~~~~la~~i~~ll~~~~~~~~~m~~~~~~ 361 (382)
T PLN02605 299 LIRGL-----------------PIILNGYIPGQEEGNVPYVVDNGFGAFSESPKEIARIVAEWFGDKSDELEAMSENALK 361 (382)
T ss_pred HHcCC-----------------CEEEecCCCccchhhHHHHHhCCceeecCCHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 99986 89998752 333434 33333445899999999999999744556666667777
Q ss_pred HHhhCCHHHHHHHHHH
Q 004314 527 YVSTHDVAYWARSFFQ 542 (761)
Q Consensus 527 ~v~~~~~~~Wa~~~l~ 542 (761)
+...+....-++.+++
T Consensus 362 ~~~~~a~~~i~~~l~~ 377 (382)
T PLN02605 362 LARPEAVFDIVHDLHE 377 (382)
T ss_pred hcCCchHHHHHHHHHH
Confidence 7777766665654443
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=6.8e-12 Score=131.71 Aligned_cols=168 Identities=14% Similarity=0.134 Sum_probs=100.6
Q ss_pred ccceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC--CCc-eEEccCCeEEeec
Q 004314 589 SKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC--KKL-GIAAEHGYFMRWS 665 (761)
Q Consensus 589 s~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~--~~l-~liaehGa~ir~~ 665 (761)
.+.|+|++|+||||++ .+...+++++++|++|.+ .|..|+|+|||++..+.+.++.. ..+ .+|++||+.|+..
T Consensus 3 ~~~klia~DlDGTLL~---~~~~is~~~~~ai~~l~~-~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~I~~NGa~I~~~ 78 (247)
T PTZ00174 3 MKKTILLFDVDGTLTK---PRNPITQEMKDTLAKLKS-KGFKIGVVGGSDYPKIKEQLGEDVLEDFDYVFSENGLVAYKD 78 (247)
T ss_pred CCCeEEEEECcCCCcC---CCCCCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHhhhhhcccCeEEeCCceEEEEC
Confidence 3579999999999998 456788999999999986 69999999999999999988632 222 5799999999864
Q ss_pred CCcceeecCc-CcCcchHHHHHHHHHHH-----hcCCCccEEEecCceEEEEcccCCC------C---C-c-hHHHHHHH
Q 004314 666 ADEEWQNCGQ-SVDFGWIQIAEPVMKLY-----TESTDGSYIEIKESALVWHHRDADP------G---F-G-SSQAKELL 728 (761)
Q Consensus 666 ~~~~w~~~~~-~~~~~w~~~v~~im~~y-----~~~t~Gs~iE~k~~~l~~hyr~ad~------d---~-~-~~qa~el~ 728 (761)
++..+..... ..+.++...+....+.+ .....+.|++.........+..... + + . .....++.
T Consensus 79 ~~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (247)
T PTZ00174 79 GELFHSQSILKFLGEEKLKKFINFCLRYIADLDIPVKRGTFIEYRNGMINISPIGRNCSQEERDEFEKYDKEHHIREKFI 158 (247)
T ss_pred CeEEEEEcchhcCCHHHHHHHHHHHHHHHHhcCCccceeeeEEcCCceEEeccccccCCHHHHHHHHhcCCcchHHHHHH
Confidence 3222222111 01222322222222221 1223455655432111111110000 0 0 0 11234556
Q ss_pred HHHHHHhcCCCcEEEe-CCeEEEEEeCCCCcCC
Q 004314 729 DHLESVLANEPAAVKS-GQFIVEVKPQVYIQLR 760 (761)
Q Consensus 729 ~~L~~~l~~~~v~V~~-G~~~vEV~p~gvnKG~ 760 (761)
+.+.+.+.+..+.... |..++||.|+|+|||.
T Consensus 159 ~~l~~~~~~~~~~~s~~~~~~leI~~~gvsKg~ 191 (247)
T PTZ00174 159 QDLKKEFSDLGLKFSIGGQISFDVFPKGWDKTY 191 (247)
T ss_pred HHHHHhcCCCCeEEEecCceEEEeeeCCCcHHH
Confidence 6666555433333443 5689999999999984
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.39 E-value=5e-12 Score=133.85 Aligned_cols=161 Identities=16% Similarity=0.097 Sum_probs=101.2
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCCC-ceEEccCCeEEeecCCc
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKK-LGIAAEHGYFMRWSADE 668 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~~-l~liaehGa~ir~~~~~ 668 (761)
..|+|++|+||||++. +..++++++++|+++.+ ++..|+++|||+...+.+.+..+.- ..+|++||+++.+.++.
T Consensus 2 ~~kli~~DlDGTLl~~---~~~i~~~~~~al~~~~~-~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~ 77 (264)
T COG0561 2 MIKLLAFDLDGTLLDS---NKTISPETKEALARLRE-KGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGEL 77 (264)
T ss_pred CeeEEEEcCCCCccCC---CCccCHHHHHHHHHHHH-CCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcE
Confidence 4689999999999994 45589999999999986 6999999999999999999987632 36999999999998332
Q ss_pred ceeecCcCcCcchHHHHHHHHHHHhcC--CCccEEEecCceE-----------------EEEcccCC--C-------CCc
Q 004314 669 EWQNCGQSVDFGWIQIAEPVMKLYTES--TDGSYIEIKESAL-----------------VWHHRDAD--P-------GFG 720 (761)
Q Consensus 669 ~w~~~~~~~~~~w~~~v~~im~~y~~~--t~Gs~iE~k~~~l-----------------~~hyr~ad--~-------d~~ 720 (761)
.... .-..+.+..+++..... ....+........ .+.....+ . +..
T Consensus 78 i~~~------~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (264)
T COG0561 78 LFQK------PLSREDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKD 151 (264)
T ss_pred Eeee------cCCHHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecC
Confidence 2222 11234455555443221 1111111110000 00000000 0 011
Q ss_pred hHHHHHHHHHHHHHhcCCCcEEEeCCeE-EEEEeCCCCcCC
Q 004314 721 SSQAKELLDHLESVLANEPAAVKSGQFI-VEVKPQVYIQLR 760 (761)
Q Consensus 721 ~~qa~el~~~L~~~l~~~~v~V~~G~~~-vEV~p~gvnKG~ 760 (761)
.....++...+.+.+....+.+.++..+ +||.|+|+|||.
T Consensus 152 ~~~~~~~~~~l~~~~~~~~~~~~~s~~~~lei~~~g~~K~~ 192 (264)
T COG0561 152 HEILEELVEALRKRFPDLGLTVSSSGPISLDITPKGVSKGY 192 (264)
T ss_pred hHhHHHHHHHHhhhccccceEEEEcCCceEEEecCCCchHH
Confidence 2233455555665555445666666655 999999999984
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=99.37 E-value=3.3e-12 Score=134.19 Aligned_cols=158 Identities=12% Similarity=0.164 Sum_probs=105.3
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhcc---CC-CCceEEccCCeEEeecC
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS---PC-KKLGIAAEHGYFMRWSA 666 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~---~~-~~l~liaehGa~ir~~~ 666 (761)
+.+|++|+||||++....+...++++.++++++.+ +++.++++|||+...+++... .. |+ .+|++||+.|..++
T Consensus 1 ~~li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~~~-~gi~fv~aTGR~~~~~~~~~~~~~~~~p~-~~I~~NGa~I~~~~ 78 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTDGDNQALLRLNALLEDHRG-EDSLLVYSTGRSPHSYKELQKQKPLLTPD-IWVTSVGSEIYYGG 78 (249)
T ss_pred CeEEEEcCCCcCcCCCCCChHHHHHHHHHHHHhhc-cCceEEEEcCCCHHHHHHHHhcCCCCCCC-EEEEcCCceEEeCC
Confidence 35899999999998432345567999999999885 688999999999998888843 22 33 47889999998753
Q ss_pred C----cceeecCcCcCcchH-HHHHHHHHHHhcCCCccEEEecCceEEEEcccCCCCCchHHHHHHHHHHHHHhcCC--C
Q 004314 667 D----EEWQNCGQSVDFGWI-QIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANE--P 739 (761)
Q Consensus 667 ~----~~w~~~~~~~~~~w~-~~v~~im~~y~~~t~Gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~--~ 739 (761)
. ..|.. .....|. +.+..+...+...++....+++...+.+.+... ++.++..++.+.+... .
T Consensus 79 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~-------~~~~~~~~l~~~l~~~~~~ 148 (249)
T TIGR01485 79 AEVPDQHWAE---YLSEKWQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPE-------AAPEVIKQLTEMLKETGLD 148 (249)
T ss_pred CCcCCHHHHH---HHhcccCHHHHHHHHhcCcccccCCccccCCeeEEEEechh-------hhhHHHHHHHHHHHhcCCC
Confidence 1 11221 1123454 334455555555556666666677877764321 2223444455444332 3
Q ss_pred cEE-EeCCeEEEEEeCCCCcCC
Q 004314 740 AAV-KSGQFIVEVKPQVYIQLR 760 (761)
Q Consensus 740 v~V-~~G~~~vEV~p~gvnKG~ 760 (761)
+.+ .+|..++||.|+++|||.
T Consensus 149 ~~~~~~~~~~ldi~~~~~~K~~ 170 (249)
T TIGR01485 149 VKLIYSSGKDLDILPQGSGKGQ 170 (249)
T ss_pred EEEEEECCceEEEEeCCCChHH
Confidence 443 568899999999999984
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.3e-11 Score=127.49 Aligned_cols=161 Identities=17% Similarity=0.177 Sum_probs=98.5
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC-C-C-ceEEccCCeEEeecCC
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC-K-K-LGIAAEHGYFMRWSAD 667 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~-~-~-l~liaehGa~ir~~~~ 667 (761)
++++++|+||||++ .+...+++++++|++|.+ . ..|+++|||++..+.+.|+.. . . ..++++||+.+...++
T Consensus 7 ~~i~~~D~DGTLl~---~~~~i~~~~~~ai~~l~~-~-i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~~NGa~i~~~g~ 81 (245)
T PLN02423 7 GVIALFDVDGTLTA---PRKEATPEMLEFMKELRK-V-VTVGVVGGSDLSKISEQLGKTVINDYDYVFSENGLVAHKDGK 81 (245)
T ss_pred ceEEEEeccCCCcC---CCCcCCHHHHHHHHHHHh-C-CEEEEECCcCHHHHHHHhcccccccCCEEEECCceEEEeCCE
Confidence 44666999999997 345677999999999995 4 999999999999999988763 2 1 3689999999985432
Q ss_pred cceeecC-cCcCcchHHHHHHHHHHH---h-----cCCCccEEEecCceEEEE--cccCCC----------CCchHHHHH
Q 004314 668 EEWQNCG-QSVDFGWIQIAEPVMKLY---T-----ESTDGSYIEIKESALVWH--HRDADP----------GFGSSQAKE 726 (761)
Q Consensus 668 ~~w~~~~-~~~~~~w~~~v~~im~~y---~-----~~t~Gs~iE~k~~~l~~h--yr~ad~----------d~~~~qa~e 726 (761)
..+.... ...+ .+.+.++++.. . ....+.+++..+..+.+. +.++.. .. .....+
T Consensus 82 ~i~~~~l~~~l~---~~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~~i~~i-~~~~~~ 157 (245)
T PLN02423 82 LIGTQSLKSFLG---EDKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKV-HNIRPK 157 (245)
T ss_pred EEEEecccccCC---HHHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccCcccccCCHhHHhhHHhhCcc-chHHHH
Confidence 2222111 1111 12333333221 1 123466777544332222 122200 01 223345
Q ss_pred HHHHHHHHhcCCCcEE-EeCCeEEEEEeCCCCcCC
Q 004314 727 LLDHLESVLANEPAAV-KSGQFIVEVKPQVYIQLR 760 (761)
Q Consensus 727 l~~~L~~~l~~~~v~V-~~G~~~vEV~p~gvnKG~ 760 (761)
+...|.+.+.+..+.+ .+|..+|||.|+|+|||.
T Consensus 158 ~~~~l~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~ 192 (245)
T PLN02423 158 MVSVLREKFAHLNLTYSIGGQISFDVFPQGWDKTY 192 (245)
T ss_pred HHHHHHHhCCCCcEEEecCCcEEEEEeeCCCCHHH
Confidence 5566666664323333 347799999999999984
|
|
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.32 E-value=7.1e-11 Score=131.94 Aligned_cols=184 Identities=15% Similarity=0.152 Sum_probs=139.3
Q ss_pred CeEEEeecCccccCChHHHHHHHHHHHHhCCCCc-CceeEEEEecC-CCCCchhHHHHHHHHHHHHHHHhcccCCCCCcc
Q 004314 336 KTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQ-GRAVLVQIANP-ARGRGKDLEEIQAEIHATCKRINETFGRPGYEP 413 (761)
Q Consensus 336 ~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~-~~vvLvqi~~p-~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~p 413 (761)
..+...+.|+.+-||+.+.|.||..+...-|+.. ....++..+++ +.+...+..++..++.+++++.+. +| .
T Consensus 273 d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l-~g-----~ 346 (495)
T KOG0853|consen 273 DRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDL-LG-----Q 346 (495)
T ss_pred ceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCc-cC-----c
Confidence 6788999999999999999999999987775411 12334444433 223334455666788888877642 12 3
Q ss_pred EEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---C
Q 004314 414 VVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---G 490 (761)
Q Consensus 414 V~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ 490 (761)
++++..+.++.+...+++.+.+..+++..|.||+|++|||+||. |+|++..+|..|++. +
T Consensus 347 ~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~gl-----------------PvvAt~~GGP~EiV~~~~t 409 (495)
T KOG0853|consen 347 FVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACGL-----------------PVVATNNGGPAEIVVHGVT 409 (495)
T ss_pred eEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhcCC-----------------CEEEecCCCceEEEEcCCc
Confidence 55666677888887777777888888888999999999999986 999999999999983 5
Q ss_pred cEEECCCCHH---HHHHHHHHHHcCCHHHHHHHHHHHhhHHhh-CCHHHHHHHHHHHHHHHH
Q 004314 491 AIRVNPWNIE---ATAEAMHEAIQMNEAEKQLRHEKHYRYVST-HDVAYWARSFFQDMERTC 548 (761)
Q Consensus 491 al~VnP~d~~---~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~Wa~~~l~~l~~~~ 548 (761)
|++++| +.+ .+|++|.++.+.|+ .+..+.++.++.|.+ +++ +.|.+.+....
T Consensus 410 G~l~dp-~~e~~~~~a~~~~kl~~~p~-l~~~~~~~G~~rV~e~fs~----~~~~~ri~~~~ 465 (495)
T KOG0853|consen 410 GLLIDP-GQEAVAELADALLKLRRDPE-LWARMGKNGLKRVKEMFSW----QHYSERIASVL 465 (495)
T ss_pred ceeeCC-chHHHHHHHHHHHHHhcCHH-HHHHHHHHHHHHHHHHHhH----HHHHHHHHHHh
Confidence 999999 666 59999999999875 466777779999988 555 45555555443
|
|
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=5.8e-10 Score=124.22 Aligned_cols=268 Identities=10% Similarity=0.083 Sum_probs=158.9
Q ss_pred HHHHHHHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHH
Q 004314 188 IFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDY 267 (761)
Q Consensus 188 ~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~ 267 (761)
.-..++++..+| |+|+.| +....++.+.+....++|+....+-..+.. ..+ .-.+|.+-..+...
T Consensus 94 ~~l~~~l~~~~p--D~Vi~~-~~~~~~~~~~~~~~~~ip~~~~~td~~~~~---------~~~---~~~ad~i~~~s~~~ 158 (380)
T PRK13609 94 KRLKLLLQAEKP--DIVINT-FPIIAVPELKKQTGISIPTYNVLTDFCLHK---------IWV---HREVDRYFVATDHV 158 (380)
T ss_pred HHHHHHHHHhCc--CEEEEc-ChHHHHHHHHHhcCCCCCeEEEeCCCCCCc---------ccc---cCCCCEEEECCHHH
Confidence 334456666677 798885 555667766666555677653332111110 011 12578888777665
Q ss_pred HHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcc-cchhhhccchHHHHHHHHHHHc---CCCe-EEEee
Q 004314 268 ARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMG-QIESVLRLADKDWRVQELKQQF---EGKT-VLLGV 342 (761)
Q Consensus 268 ~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~-~f~~~~~~~~~~~~~~~lr~~~---~~~~-vil~V 342 (761)
.+.+.+ .|+. ..+|.++ |++.. .|.... + ...+++++ ++++ +++..
T Consensus 159 ~~~l~~-----~gi~---------------~~ki~v~--G~p~~~~f~~~~---~----~~~~~~~~~l~~~~~~il~~~ 209 (380)
T PRK13609 159 KKVLVD-----IGVP---------------PEQVVET--GIPIRSSFELKI---N----PDIIYNKYQLCPNKKILLIMA 209 (380)
T ss_pred HHHHHH-----cCCC---------------hhHEEEE--CcccChHHcCcC---C----HHHHHHHcCCCCCCcEEEEEc
Confidence 444432 1321 1133333 33332 232211 1 12345555 2444 55667
Q ss_pred cCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCC
Q 004314 343 DDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVT 422 (761)
Q Consensus 343 dRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~ 422 (761)
|++...||+...++++.+ .|+++ ++++++. ++ .+++++++++++.+ ..|+++ +.+
T Consensus 210 G~~~~~k~~~~li~~l~~----~~~~~----~viv~G~---~~----~~~~~l~~~~~~~~--------~~v~~~-g~~- 264 (380)
T PRK13609 210 GAHGVLGNVKELCQSLMS----VPDLQ----VVVVCGK---NE----ALKQSLEDLQETNP--------DALKVF-GYV- 264 (380)
T ss_pred CCCCCCcCHHHHHHHHhh----CCCcE----EEEEeCC---CH----HHHHHHHHHHhcCC--------CcEEEE-ech-
Confidence 899989999988887642 35544 6666532 11 23345555543322 247766 454
Q ss_pred HHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcC-CCCCc----ccc-cCcEEECC
Q 004314 423 LSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSE-FIGCS----PSL-SGAIRVNP 496 (761)
Q Consensus 423 ~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se-~~G~~----~~l-~~al~VnP 496 (761)
+++..+|+.||++|. ++.|++.+|||+||. |+|++. ..|.. ..+ ..|..+.+
T Consensus 265 -~~~~~l~~~aD~~v~----~~gg~t~~EA~a~g~-----------------PvI~~~~~~g~~~~n~~~~~~~G~~~~~ 322 (380)
T PRK13609 265 -ENIDELFRVTSCMIT----KPGGITLSEAAALGV-----------------PVILYKPVPGQEKENAMYFERKGAAVVI 322 (380)
T ss_pred -hhHHHHHHhccEEEe----CCCchHHHHHHHhCC-----------------CEEECCCCCCcchHHHHHHHhCCcEEEE
Confidence 468899999999874 455899999999986 888875 44421 122 23444556
Q ss_pred CCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHHHHHHH
Q 004314 497 WNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERT 547 (761)
Q Consensus 497 ~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l~~~ 547 (761)
.|+++++++|.++++.++ .++.+.++.+++...++....++.+++.+...
T Consensus 323 ~~~~~l~~~i~~ll~~~~-~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~ 372 (380)
T PRK13609 323 RDDEEVFAKTEALLQDDM-KLLQMKEAMKSLYLPEPADHIVDDILAENHVE 372 (380)
T ss_pred CCHHHHHHHHHHHHCCHH-HHHHHHHHHHHhCCCchHHHHHHHHHHhhhhh
Confidence 799999999999998653 45555555667777788888888887766543
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=5.2e-11 Score=126.71 Aligned_cols=71 Identities=17% Similarity=0.179 Sum_probs=61.1
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC-CceEEccCCeEEeec
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWS 665 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~-~l~liaehGa~ir~~ 665 (761)
.|+|++|+||||++ .+..++++++++|++|.+ +|..|+++|||++..+.+.+..+. +..+|+.||+.|+..
T Consensus 2 ~kli~~DlDGTLl~---~~~~i~~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~ 73 (272)
T PRK15126 2 ARLAAFDMDGTLLM---PDHHLGEKTLSTLARLRE-RDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSL 73 (272)
T ss_pred ccEEEEeCCCcCcC---CCCcCCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcC
Confidence 47999999999998 345689999999999986 699999999999999998887652 345899999999864
|
|
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.3e-10 Score=122.83 Aligned_cols=197 Identities=22% Similarity=0.283 Sum_probs=142.1
Q ss_pred EEEEeccccCcccchhh-hccchHHHHHHHHHHHcCC--CeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEE
Q 004314 300 GIKIMPVGIHMGQIESV-LRLADKDWRVQELKQQFEG--KTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQ 376 (761)
Q Consensus 300 ~i~v~P~GId~~~f~~~-~~~~~~~~~~~~lr~~~~~--~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 376 (761)
.+.++|+|+++..+... .. ...+ ..++++++|+++.||+...++|+..+.+..++ +.++.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~----~~~~~ 235 (381)
T COG0438 173 KIVVIPNGIDTEKFAPARIG-------------LLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD----IKLVI 235 (381)
T ss_pred CceEecCCcCHHHcCccccC-------------CCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCC----eEEEE
Confidence 56778999999887642 00 0112 36899999999999999999999999877665 34666
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeee
Q 004314 377 IANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCR 456 (761)
Q Consensus 377 i~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~ 456 (761)
+|... +. ...+..++...+. ...|.+ .+.++.+++..+|+.||+++.||..||+|++.+|||+||
T Consensus 236 ~g~~~-----~~---~~~~~~~~~~~~~------~~~v~~-~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g 300 (381)
T COG0438 236 VGDGP-----ER---REELEKLAKKLGL------EDNVKF-LGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAAG 300 (381)
T ss_pred EcCCC-----cc---HHHHHHHHHHhCC------CCcEEE-ecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhcC
Confidence 66422 21 1223334444332 123555 667888899999999999999999999999999999997
Q ss_pred cCCCCCCCCCCCCCCCCceEEEcCCCCCccccc-C--cEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHH-hhCC
Q 004314 457 QGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-G--AIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYV-STHD 532 (761)
Q Consensus 457 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~--al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~ 532 (761)
. |+|+|...|..+.+. + |+++++.|.+++++++..+++++ +.++...+..++.+ ..++
T Consensus 301 ~-----------------pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~ 362 (381)
T COG0438 301 T-----------------PVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDP-ELREELGEAARERVEEEFS 362 (381)
T ss_pred C-----------------cEEECCCCChHHHhcCCCceEecCCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHhcC
Confidence 5 899999998888885 3 77888888999999999999987 33333333344444 4666
Q ss_pred HHHHHHHHHHHHHH
Q 004314 533 VAYWARSFFQDMER 546 (761)
Q Consensus 533 ~~~Wa~~~l~~l~~ 546 (761)
+..-++.+..-+..
T Consensus 363 ~~~~~~~~~~~~~~ 376 (381)
T COG0438 363 WERIAEQLLELYEE 376 (381)
T ss_pred HHHHHHHHHHHHHH
Confidence 66666555555544
|
|
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.3e-10 Score=126.16 Aligned_cols=256 Identities=16% Similarity=0.094 Sum_probs=157.9
Q ss_pred HHHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHH
Q 004314 192 RVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHF 271 (761)
Q Consensus 192 ~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~F 271 (761)
++++..+| |+|+.|+....+... +..+..+.|+.++.|..+|.. .+.++- ..+|.+...+.+- +
T Consensus 85 ~~ik~~~p--Dvv~~~~~~~~~~~~-~~~~~~~~p~v~~~~~~~~~~--------~~r~~~--~~~d~ii~~~~~~---~ 148 (357)
T PRK00726 85 KILKRFKP--DVVVGFGGYVSGPGG-LAARLLGIPLVIHEQNAVPGL--------ANKLLA--RFAKKVATAFPGA---F 148 (357)
T ss_pred HHHHhcCC--CEEEECCCcchhHHH-HHHHHcCCCEEEEcCCCCccH--------HHHHHH--HHhchheECchhh---h
Confidence 34454555 899999865544434 444556788887766555421 011111 1345443333210 0
Q ss_pred HHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc-CCCeEEEeecCccccCC
Q 004314 272 LSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF-EGKTVLLGVDDMDIFKG 350 (761)
Q Consensus 272 l~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VdRld~~KG 350 (761)
. . ....++.++|+|||.+.+.+. .. ..++ .. ++.++|+.+++....|+
T Consensus 149 ~--------------------~--~~~~~i~vi~n~v~~~~~~~~----~~---~~~~--~~~~~~~~i~~~gg~~~~~~ 197 (357)
T PRK00726 149 P--------------------E--FFKPKAVVTGNPVREEILALA----AP---PARL--AGREGKPTLLVVGGSQGARV 197 (357)
T ss_pred h--------------------c--cCCCCEEEECCCCChHhhccc----ch---hhhc--cCCCCCeEEEEECCcHhHHH
Confidence 0 0 122468899999998765421 10 0111 12 36788899999999999
Q ss_pred hHHHH-HHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHH
Q 004314 351 VDLKL-LAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAY 429 (761)
Q Consensus 351 i~~~l-~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~al 429 (761)
+..++ +|+.++.. .| .+++++|. ++. +++.+. .+ .+ .. |.+. +.+ +++..+
T Consensus 198 ~~~~l~~a~~~~~~-~~-----~~~~~~G~-----g~~-~~~~~~----~~-~~-------~~-v~~~-g~~--~~~~~~ 249 (357)
T PRK00726 198 LNEAVPEALALLPE-AL-----QVIHQTGK-----GDL-EEVRAA----YA-AG-------IN-AEVV-PFI--DDMAAA 249 (357)
T ss_pred HHHHHHHHHHHhhh-Cc-----EEEEEcCC-----CcH-HHHHHH----hh-cC-------Cc-EEEe-ehH--hhHHHH
Confidence 87776 88887743 22 23555553 321 222222 21 11 12 5544 443 689999
Q ss_pred HHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCC--------cccc---cCcEEECCCC
Q 004314 430 YTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGC--------SPSL---SGAIRVNPWN 498 (761)
Q Consensus 430 y~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~--------~~~l---~~al~VnP~d 498 (761)
|+.||+++.+| | +.+.+|||+||. |+|++...|. ++.+ ..|++++|.|
T Consensus 250 ~~~~d~~i~~~---g-~~~~~Ea~~~g~-----------------Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~ 308 (357)
T PRK00726 250 YAAADLVICRA---G-ASTVAELAAAGL-----------------PAILVPLPHAADDHQTANARALVDAGAALLIPQSD 308 (357)
T ss_pred HHhCCEEEECC---C-HHHHHHHHHhCC-----------------CEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEccc
Confidence 99999999877 3 588999999986 7777654321 2334 2378898888
Q ss_pred --HHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHHHH
Q 004314 499 --IEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDM 544 (761)
Q Consensus 499 --~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l 544 (761)
+++++++|.+++.++ +.++...+..+++..+.+...-++.+++.+
T Consensus 309 ~~~~~l~~~i~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (357)
T PRK00726 309 LTPEKLAEKLLELLSDP-ERLEAMAEAARALGKPDAAERLADLIEELA 355 (357)
T ss_pred CCHHHHHHHHHHHHcCH-HHHHHHHHHHHhcCCcCHHHHHHHHHHHHh
Confidence 999999999999974 455666666777787788777777776654
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.27 E-value=7.8e-11 Score=118.99 Aligned_cols=111 Identities=19% Similarity=0.248 Sum_probs=82.9
Q ss_pred eecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCC
Q 004314 341 GVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKP 420 (761)
Q Consensus 341 ~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~ 420 (761)
++||+.+.||+...++|+..+.+++|+++ ++++|.. .+....+ .++... + ....|.+++ .
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~----~~i~G~~-----~~~~~~~----~~~~~~----~--~~~~v~~~~-~ 168 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLK----LVIAGDG-----PEREYLE----ELLAAL----L--LLDRVIFLG-G 168 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeE----EEEEeCC-----CChHHHH----HHHHhc----C--CcccEEEeC-C
Confidence 89999999999999999999988887765 8888742 1111111 111111 1 123577665 4
Q ss_pred C-CHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcccc
Q 004314 421 V-TLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL 488 (761)
Q Consensus 421 v-~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 488 (761)
+ +.+++..+++.||+++.||..||++.+.+|||+||. |+|+|+..|..+.+
T Consensus 169 ~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~-----------------pvi~s~~~~~~e~i 220 (229)
T cd01635 169 LDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACGL-----------------PVIATDVGGPPEIV 220 (229)
T ss_pred CCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhCCC-----------------CEEEcCCCCcceEE
Confidence 4 566677777779999999999999999999999976 99999998887755
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=4.6e-11 Score=126.55 Aligned_cols=71 Identities=15% Similarity=0.154 Sum_probs=61.1
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC-CceEEccCCeEEeec
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWS 665 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~-~l~liaehGa~ir~~ 665 (761)
.|+|++|+||||++. +...+++++++|++|.+ +|..|+|+|||+...+.+.+..++ +..+|+.||+.+...
T Consensus 2 ikli~~DlDGTLl~~---~~~is~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~ 73 (266)
T PRK10976 2 YQVVASDLDGTLLSP---DHTLSPYAKETLKLLTA-RGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDT 73 (266)
T ss_pred ceEEEEeCCCCCcCC---CCcCCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECC
Confidence 489999999999983 45688999999999995 799999999999999998887653 345899999999864
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.1e-09 Score=120.07 Aligned_cols=246 Identities=16% Similarity=0.166 Sum_probs=147.7
Q ss_pred HHHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHH
Q 004314 192 RVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHF 271 (761)
Q Consensus 192 ~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~F 271 (761)
++++..+| |+|+.|..... ++..+..+..++|+.++-|..||.. . +.++ ...+|.|...+....+.
T Consensus 83 ~~i~~~~p--DvI~~~~~~~~-~~~~~~a~~~~~p~v~~~~~~~~~~--~------~~~~--~~~~~~vi~~s~~~~~~- 148 (350)
T cd03785 83 KILKKFKP--DVVVGFGGYVS-GPVGLAAKLLGIPLVIHEQNAVPGL--A------NRLL--ARFADRVALSFPETAKY- 148 (350)
T ss_pred HHHHhcCC--CEEEECCCCcc-hHHHHHHHHhCCCEEEEcCCCCccH--H------HHHH--HHhhCEEEEcchhhhhc-
Confidence 44555566 89999976543 3334444455677776555555421 0 1111 12257766655432211
Q ss_pred HHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc---CCCeEEEeecCcccc
Q 004314 272 LSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIF 348 (761)
Q Consensus 272 l~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~ 348 (761)
+ ...++.++|+|+|.+.+.+.. . ++++ +++++++.+++....
T Consensus 149 ----------------------~--~~~~~~~i~n~v~~~~~~~~~-------~----~~~~~~~~~~~~i~~~~g~~~~ 193 (350)
T cd03785 149 ----------------------F--PKDKAVVTGNPVREEILALDR-------E----RARLGLRPGKPTLLVFGGSQGA 193 (350)
T ss_pred ----------------------C--CCCcEEEECCCCchHHhhhhh-------h----HHhcCCCCCCeEEEEECCcHhH
Confidence 0 113567789999987664310 0 2333 467788888887777
Q ss_pred CChHHHH-HHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHH
Q 004314 349 KGVDLKL-LAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERA 427 (761)
Q Consensus 349 KGi~~~l-~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~ 427 (761)
|+...++ .|++.+.+ ++ +.++.+++ .+ +.+++++ .+++. + ..|++++ .+ +++.
T Consensus 194 ~~~~~~l~~a~~~l~~--~~----~~~~~i~G----~g-~~~~l~~----~~~~~----~----~~v~~~g-~~--~~~~ 247 (350)
T cd03785 194 RAINEAVPEALAELLR--KR----LQVIHQTG----KG-DLEEVKK----AYEEL----G----VNYEVFP-FI--DDMA 247 (350)
T ss_pred HHHHHHHHHHHHHhhc--cC----eEEEEEcC----Cc-cHHHHHH----HHhcc----C----CCeEEee-hh--hhHH
Confidence 8876654 77776642 22 33333332 22 3333433 33222 1 1366554 33 7999
Q ss_pred HHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCC----C----cccc---cCcEEECC
Q 004314 428 AYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIG----C----SPSL---SGAIRVNP 496 (761)
Q Consensus 428 aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~----~~~l---~~al~VnP 496 (761)
.+|+.||++|.+| | +.+.+|||+||. |+|++...| + ++.+ ..|+++++
T Consensus 248 ~~l~~ad~~v~~s---g-~~t~~Eam~~G~-----------------Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~ 306 (350)
T cd03785 248 AAYAAADLVISRA---G-ASTVAELAALGL-----------------PAILIPLPYAADDHQTANARALVKAGAAVLIPQ 306 (350)
T ss_pred HHHHhcCEEEECC---C-HhHHHHHHHhCC-----------------CEEEeecCCCCCCcHHHhHHHHHhCCCEEEEec
Confidence 9999999999876 3 578999999986 777765443 1 2334 23889998
Q ss_pred C--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHH
Q 004314 497 W--NIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVA 534 (761)
Q Consensus 497 ~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~ 534 (761)
. |.++++++|..++.. ++.++...++.++++..+...
T Consensus 307 ~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~ 345 (350)
T cd03785 307 EELTPERLAAALLELLSD-PERLKAMAEAARSLARPDAAE 345 (350)
T ss_pred CCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHhcCCCCHHH
Confidence 7 899999999999974 445555555667776655433
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=8.5e-11 Score=124.77 Aligned_cols=71 Identities=18% Similarity=0.220 Sum_probs=60.9
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC----CceEEccCCeEEeec
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK----KLGIAAEHGYFMRWS 665 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~----~l~liaehGa~ir~~ 665 (761)
.|+|++|+||||++. +...+++++++|++|.+ .|..|+++|||++..+.+.+..+. ...+|++||+.|...
T Consensus 3 ~kli~~DlDGTLl~~---~~~i~~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~ 77 (270)
T PRK10513 3 IKLIAIDMDGTLLLP---DHTISPAVKQAIAAARA-KGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKA 77 (270)
T ss_pred eEEEEEecCCcCcCC---CCccCHHHHHHHHHHHH-CCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEEC
Confidence 689999999999983 45688999999999986 699999999999999988887652 135899999999863
|
|
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.21 E-value=1e-09 Score=121.58 Aligned_cols=252 Identities=14% Similarity=0.111 Sum_probs=147.9
Q ss_pred HHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhh--hcCEEeeeC
Q 004314 187 KIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALL--NADLIGFHT 264 (761)
Q Consensus 187 ~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll--~~DligF~t 264 (761)
..|++.+ +..+| |+|++|......+...+-.+..++|+++.-+-. -+.+.+. |+.+++.+.+. .+|++--.+
T Consensus 76 ~~l~~~l-~~~~p--Div~~~gd~~~~la~a~aa~~~~ipv~h~~~g~-~s~~~~~--~~~~~~~r~~~~~~ad~~~~~s 149 (365)
T TIGR00236 76 EGLEELL-LEEKP--DIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGL-RTGDRYS--PMPEEINRQLTGHIADLHFAPT 149 (365)
T ss_pred HHHHHHH-HHcCC--CEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCC-CcCCCCC--CCccHHHHHHHHHHHHhccCCC
Confidence 3455443 44466 899999654444433333334568887542211 1111111 12233323222 267777777
Q ss_pred HHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcC-CCeEEEe-e
Q 004314 265 FDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFE-GKTVLLG-V 342 (761)
Q Consensus 265 ~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~-~~~vil~-V 342 (761)
....+++++ +|. ...+|.++++|+....+..... .....+++++. ++.+++. .
T Consensus 150 ~~~~~~l~~-----~G~---------------~~~~I~vign~~~d~~~~~~~~-----~~~~~~~~~~~~~~~~vl~~~ 204 (365)
T TIGR00236 150 EQAKDNLLR-----ENV---------------KADSIFVTGNTVIDALLTNVEI-----AYSSPVLSEFGEDKRYILLTL 204 (365)
T ss_pred HHHHHHHHH-----cCC---------------CcccEEEeCChHHHHHHHHHhh-----ccchhHHHhcCCCCCEEEEec
Confidence 777777653 232 2236788899963222221110 01133455553 3344444 4
Q ss_pred cCcc-ccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCC
Q 004314 343 DDMD-IFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPV 421 (761)
Q Consensus 343 dRld-~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v 421 (761)
.|.. ..||+..+++|+.++.+++|+++ ++.++.|. ++ .+.+ +.+.++ . ...|.++ +++
T Consensus 205 hr~~~~~k~~~~ll~a~~~l~~~~~~~~----~vi~~~~~----~~---~~~~---~~~~~~----~--~~~v~~~-~~~ 263 (365)
T TIGR00236 205 HRRENVGEPLENIFKAIREIVEEFEDVQ----IVYPVHLN----PV---VREP---LHKHLG----D--SKRVHLI-EPL 263 (365)
T ss_pred CchhhhhhHHHHHHHHHHHHHHHCCCCE----EEEECCCC----hH---HHHH---HHHHhC----C--CCCEEEE-CCC
Confidence 4643 45999999999999988888765 66554332 11 1222 222222 1 1246655 578
Q ss_pred CHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEc-CCCCCccccc-C-cEEECCCC
Q 004314 422 TLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVS-EFIGCSPSLS-G-AIRVNPWN 498 (761)
Q Consensus 422 ~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~S-e~~G~~~~l~-~-al~VnP~d 498 (761)
+..++..+|+.||+++.+| |.+..|||+||. |+|++ ..+|..+.+. + ++++ |.|
T Consensus 264 ~~~~~~~~l~~ad~vv~~S-----g~~~~EA~a~g~-----------------PvI~~~~~~~~~e~~~~g~~~lv-~~d 320 (365)
T TIGR00236 264 EYLDFLNLAANSHLILTDS-----GGVQEEAPSLGK-----------------PVLVLRDTTERPETVEAGTNKLV-GTD 320 (365)
T ss_pred ChHHHHHHHHhCCEEEECC-----hhHHHHHHHcCC-----------------CEEECCCCCCChHHHhcCceEEe-CCC
Confidence 8999999999999999888 456799999976 77875 5555555543 3 5566 579
Q ss_pred HHHHHHHHHHHHcCC
Q 004314 499 IEATAEAMHEAIQMN 513 (761)
Q Consensus 499 ~~~~A~ai~~aL~m~ 513 (761)
+++++++|.++++.+
T Consensus 321 ~~~i~~ai~~ll~~~ 335 (365)
T TIGR00236 321 KENITKAAKRLLTDP 335 (365)
T ss_pred HHHHHHHHHHHHhCh
Confidence 999999999999864
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.7e-10 Score=119.41 Aligned_cols=71 Identities=18% Similarity=0.133 Sum_probs=60.3
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC-CceEEccCCeEEeec
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWS 665 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~-~l~liaehGa~ir~~ 665 (761)
.|+|++|+||||++. +...+++++++|++|.+ .++.|+++|||+...+.+.+..++ +..+|++||+.+...
T Consensus 3 ~kli~~DlDGTLl~~---~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~ 74 (230)
T PRK01158 3 IKAIAIDIDGTITDK---DRRLSLKAVEAIRKAEK-LGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVG 74 (230)
T ss_pred eeEEEEecCCCcCCC---CCccCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEc
Confidence 589999999999973 45678999999999995 799999999999999888776542 246899999999875
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.18 E-value=3.6e-10 Score=117.19 Aligned_cols=157 Identities=17% Similarity=0.233 Sum_probs=100.2
Q ss_pred EEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC-CceEEccCCeEEeecCCcc-ee
Q 004314 594 ILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSADEE-WQ 671 (761)
Q Consensus 594 I~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~-~l~liaehGa~ir~~~~~~-w~ 671 (761)
||+|+||||++. +..++++++++|++|.+ .|..++++|||++..+.+++..++ +.++|++||+.+....+.. +.
T Consensus 1 i~~DlDGTLl~~---~~~i~~~~~~al~~l~~-~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~ 76 (254)
T PF08282_consen 1 IFSDLDGTLLNS---DGKISPETIEALKELQE-KGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYE 76 (254)
T ss_dssp EEEECCTTTCST---TSSSCHHHHHHHHHHHH-TTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEE
T ss_pred cEEEECCceecC---CCeeCHHHHHHHHhhcc-cceEEEEEccCcccccccccccccchhhhcccccceeeecccccchh
Confidence 789999999983 45588999999999997 699999999999999999998653 2589999999994432222 22
Q ss_pred ecCcCcCcchHHHHHHHHHHHhc--------CCCccEEEecC----------c---eEEEEcccC--CCC-------Cch
Q 004314 672 NCGQSVDFGWIQIAEPVMKLYTE--------STDGSYIEIKE----------S---ALVWHHRDA--DPG-------FGS 721 (761)
Q Consensus 672 ~~~~~~~~~w~~~v~~im~~y~~--------~t~Gs~iE~k~----------~---~l~~hyr~a--d~d-------~~~ 721 (761)
.. .+ .+.+..+++...+ ..++.|+.... . ......... ..+ ...
T Consensus 77 ~~---i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~ 150 (254)
T PF08282_consen 77 KP---ID---SDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDP 150 (254)
T ss_dssp ES---B----HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCH
T ss_pred hh---ee---ccchhheeehhhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccc
Confidence 21 12 2333344433221 22233333220 0 000000000 000 124
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEeCCeEEEEEeCCCCcCC
Q 004314 722 SQAKELLDHLESVLANEPAAVKSGQFIVEVKPQVYIQLR 760 (761)
Q Consensus 722 ~qa~el~~~L~~~l~~~~v~V~~G~~~vEV~p~gvnKG~ 760 (761)
.+..++.++|.+.+.+.-..+.++..++||.|+++|||.
T Consensus 151 ~~~~~l~~~l~~~~~~~~~~~~~~~~~lei~~~~vsK~~ 189 (254)
T PF08282_consen 151 EDLEQLREELKKKFPNLIDVVRSSPYFLEITPKGVSKGS 189 (254)
T ss_dssp HHHHHHHHHHHHHHTTTEEEEEEETTEEEEEETTSSHHH
T ss_pred hhhhhhhhhhccccCcceeEEEecccceEEeeCCCCHHH
Confidence 566777888887765533455679999999999999984
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=99.17 E-value=3.1e-10 Score=119.59 Aligned_cols=70 Identities=16% Similarity=0.184 Sum_probs=60.3
Q ss_pred eEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC-CceEEccCCeEEeecC
Q 004314 593 AILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSA 666 (761)
Q Consensus 593 lI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~-~l~liaehGa~ir~~~ 666 (761)
+|++|+||||++. +...+++++++|++|.+ .|..|+++|||++..+.+.+..+. +.++|++||+.+...+
T Consensus 1 li~~DlDGTLl~~---~~~i~~~~~~~i~~l~~-~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~ 71 (256)
T TIGR00099 1 LIFIDLDGTLLND---DHTISPSTKEALAKLRE-KGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQ 71 (256)
T ss_pred CEEEeCCCCCCCC---CCccCHHHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCC
Confidence 6899999999983 45688999999999996 599999999999999999887653 3479999999998763
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.17 E-value=4e-10 Score=119.97 Aligned_cols=73 Identities=19% Similarity=0.207 Sum_probs=62.3
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC--CceEEccCCeEEeecC
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK--KLGIAAEHGYFMRWSA 666 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~--~l~liaehGa~ir~~~ 666 (761)
.+++|++|+||||++. +..++++++++|++|.+ .|..|+++|||+...+...+..+. ...+|++||+.|..+.
T Consensus 6 ~~~lI~~DlDGTLL~~---~~~i~~~~~~ai~~l~~-~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~ 80 (271)
T PRK03669 6 DPLLIFTDLDGTLLDS---HTYDWQPAAPWLTRLRE-AQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDE 80 (271)
T ss_pred CCeEEEEeCccCCcCC---CCcCcHHHHHHHHHHHH-cCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecC
Confidence 4789999999999973 45678899999999995 699999999999999998887653 2469999999998763
|
|
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=3.9e-09 Score=118.38 Aligned_cols=270 Identities=11% Similarity=0.121 Sum_probs=155.3
Q ss_pred HHHHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHH
Q 004314 191 QRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARH 270 (761)
Q Consensus 191 ~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~ 270 (761)
.++++..+| |+|.++ +....+..+.+++..++|+.. .++-|-.. + ..+ --.+|.+-..+....+.
T Consensus 97 ~~~l~~~kP--DvVi~~-~p~~~~~~l~~~~~~~iP~~~-v~td~~~~------~---~w~--~~~~d~~~v~s~~~~~~ 161 (391)
T PRK13608 97 INLLIKEKP--DLILLT-FPTPVMSVLTEQFNINIPVAT-VMTDYRLH------K---NWI--TPYSTRYYVATKETKQD 161 (391)
T ss_pred HHHHHHhCc--CEEEEC-CcHHHHHHHHHhcCCCCCEEE-EeCCCCcc------c---ccc--cCCCCEEEECCHHHHHH
Confidence 344555677 788885 222233333333344677743 34433110 0 000 12478877777655544
Q ss_pred HHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc---CCC-eEEEeecCcc
Q 004314 271 FLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGK-TVLLGVDDMD 346 (761)
Q Consensus 271 Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~-~vil~VdRld 346 (761)
+.+ .|.. ..+|.++++.|+. .|.... + ..++++++ +++ .+++++||+.
T Consensus 162 l~~-----~gi~---------------~~ki~v~GiPv~~-~f~~~~---~----~~~~~~~~~l~~~~~~ilv~~G~lg 213 (391)
T PRK13608 162 FID-----VGID---------------PSTVKVTGIPIDN-KFETPI---D----QKQWLIDNNLDPDKQTILMSAGAFG 213 (391)
T ss_pred HHH-----cCCC---------------HHHEEEECeecCh-Hhcccc---c----HHHHHHHcCCCCCCCEEEEECCCcc
Confidence 432 1321 1234445555553 333211 1 12334444 244 4567799999
Q ss_pred ccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHH
Q 004314 347 IFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSER 426 (761)
Q Consensus 347 ~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el 426 (761)
..||+..+++++ ++..|+++ ++++++. ++ ++.+++.+. .+. ...|.++ +.+ +++
T Consensus 214 ~~k~~~~li~~~---~~~~~~~~----~vvv~G~----~~---~l~~~l~~~---~~~------~~~v~~~-G~~--~~~ 267 (391)
T PRK13608 214 VSKGFDTMITDI---LAKSANAQ----VVMICGK----SK---ELKRSLTAK---FKS------NENVLIL-GYT--KHM 267 (391)
T ss_pred cchhHHHHHHHH---HhcCCCce----EEEEcCC----CH---HHHHHHHHH---hcc------CCCeEEE-ecc--chH
Confidence 999999999875 34455544 6556531 22 222333322 221 1136554 444 579
Q ss_pred HHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcccc------cCcEEECCCCHH
Q 004314 427 AAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL------SGAIRVNPWNIE 500 (761)
Q Consensus 427 ~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l------~~al~VnP~d~~ 500 (761)
..+|+.||++|.. +.|++..|||+||. |+|++...+..+.- ..+.-+-+.|.+
T Consensus 268 ~~~~~~aDl~I~k----~gg~tl~EA~a~G~-----------------PvI~~~~~pgqe~~N~~~~~~~G~g~~~~~~~ 326 (391)
T PRK13608 268 NEWMASSQLMITK----PGGITISEGLARCI-----------------PMIFLNPAPGQELENALYFEEKGFGKIADTPE 326 (391)
T ss_pred HHHHHhhhEEEeC----CchHHHHHHHHhCC-----------------CEEECCCCCCcchhHHHHHHhCCcEEEeCCHH
Confidence 9999999999863 45889999999986 78887533222211 122223356999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHHHHHHHHHhh
Q 004314 501 ATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERTCKDH 551 (761)
Q Consensus 501 ~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l~~~~~~~ 551 (761)
+++++|.++++.+ ++++.+.++.+++...++...-++.+++.+...++-+
T Consensus 327 ~l~~~i~~ll~~~-~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~~~ 376 (391)
T PRK13608 327 EAIKIVASLTNGN-EQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQPQ 376 (391)
T ss_pred HHHHHHHHHhcCH-HHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhhhh
Confidence 9999999999865 4555566667888888888888888887776655443
|
|
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.8e-09 Score=117.51 Aligned_cols=252 Identities=13% Similarity=0.023 Sum_probs=143.5
Q ss_pred HHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcch--HHHHHHhhhcCEEeee
Q 004314 186 NKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVR--EEILKALLNADLIGFH 263 (761)
Q Consensus 186 N~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r--~~il~~ll~~DligF~ 263 (761)
...+.+.+.+. +| |+|++|++....++..+..+..++|+.++.|--.. .+ +..|+. +..+. -.+|.+-.-
T Consensus 77 ~~~l~~~l~~~-~p--DvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s-~~--~~~~~~~~r~~~~--~~ad~~~~~ 148 (363)
T cd03786 77 LIGLEAVLLEE-KP--DLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRS-FD--RGMPDEENRHAID--KLSDLHFAP 148 (363)
T ss_pred HHHHHHHHHHh-CC--CEEEEeCCchHHHHHHHHHHHcCCCEEEEeccccc-CC--CCCCchHHHHHHH--HHhhhccCC
Confidence 33444444444 66 89999987766565555555557888865542110 00 001111 11111 235665555
Q ss_pred CHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEecccc-CcccchhhhccchHHHHHHHHHHHc---CCCeEE
Q 004314 264 TFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGI-HMGQIESVLRLADKDWRVQELKQQF---EGKTVL 339 (761)
Q Consensus 264 t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GI-d~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vi 339 (761)
+....+++.+ .|. ...+|.++++++ |...+..... . ....++.+ .++.++
T Consensus 149 s~~~~~~l~~-----~G~---------------~~~kI~vign~v~d~~~~~~~~~-~-----~~~~~~~~~~~~~~~vl 202 (363)
T cd03786 149 TEEARRNLLQ-----EGE---------------PPERIFVVGNTMIDALLRLLELA-K-----KELILELLGLLPKKYIL 202 (363)
T ss_pred CHHHHHHHHH-----cCC---------------CcccEEEECchHHHHHHHHHHhh-c-----cchhhhhcccCCCCEEE
Confidence 5544444332 121 234677788774 5433322111 0 01112223 245577
Q ss_pred EeecCccc---cCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEE
Q 004314 340 LGVDDMDI---FKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVF 416 (761)
Q Consensus 340 l~VdRld~---~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~ 416 (761)
+.++|+.. .||+..+++|++++.+. ++.++..+. ++.... +++.+.+.+.. -..|.+
T Consensus 203 v~~~r~~~~~~~k~~~~l~~al~~l~~~------~~~vi~~~~-----~~~~~~----l~~~~~~~~~~-----~~~v~~ 262 (363)
T cd03786 203 VTLHRVENVDDGEQLEEILEALAELAEE------DVPVVFPNH-----PRTRPR----IREAGLEFLGH-----HPNVLL 262 (363)
T ss_pred EEeCCccccCChHHHHHHHHHHHHHHhc------CCEEEEECC-----CChHHH----HHHHHHhhccC-----CCCEEE
Confidence 78999875 79999999999987532 233444332 222233 33444433210 124665
Q ss_pred EcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcccc-cCcEEEC
Q 004314 417 IDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL-SGAIRVN 495 (761)
Q Consensus 417 ~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~al~Vn 495 (761)
+ +....+++..+|+.||++|.+|- | +..|+|+||. |+|++...+..+.+ ..|+-+.
T Consensus 263 ~-~~~~~~~~~~l~~~ad~~v~~Sg----g-i~~Ea~~~g~-----------------PvI~~~~~~~~~~~~~~g~~~~ 319 (363)
T cd03786 263 I-SPLGYLYFLLLLKNADLVLTDSG----G-IQEEASFLGV-----------------PVLNLRDRTERPETVESGTNVL 319 (363)
T ss_pred E-CCcCHHHHHHHHHcCcEEEEcCc----c-HHhhhhhcCC-----------------CEEeeCCCCccchhhheeeEEe
Confidence 5 45678899999999999999984 4 4699999976 78887655544444 4444443
Q ss_pred C-CCHHHHHHHHHHHHcCCH
Q 004314 496 P-WNIEATAEAMHEAIQMNE 514 (761)
Q Consensus 496 P-~d~~~~A~ai~~aL~m~~ 514 (761)
+ .|+++++++|.++++.+.
T Consensus 320 ~~~~~~~i~~~i~~ll~~~~ 339 (363)
T cd03786 320 VGTDPEAILAAIEKLLSDEF 339 (363)
T ss_pred cCCCHHHHHHHHHHHhcCch
Confidence 3 379999999999998764
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.4e-09 Score=119.14 Aligned_cols=180 Identities=16% Similarity=0.125 Sum_probs=116.0
Q ss_pred EEeccccCcccchhhhccchHHHHHHHHHHHc-CCCeEEEeecCccccCChHHH-HHHHHHHHHhCCCCcCceeEEEEec
Q 004314 302 KIMPVGIHMGQIESVLRLADKDWRVQELKQQF-EGKTVLLGVDDMDIFKGVDLK-LLAMEHLLKQHPKWQGRAVLVQIAN 379 (761)
Q Consensus 302 ~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VdRld~~KGi~~~-l~A~~~ll~~~P~~~~~vvLvqi~~ 379 (761)
.++|+|+|...+.+. .. ..++ .+ +++++|++++|....|++... +.|++++.+. +++ ++.+++
T Consensus 153 ~~i~n~v~~~~~~~~----~~---~~~~--~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~~----~~~~~g 217 (348)
T TIGR01133 153 VLVGNPVRQEIRSLP----VP---RERF--GLREGKPTILVLGGSQGAKILNELVPKALAKLAEK--GIQ----IVHQTG 217 (348)
T ss_pred eEEcCCcCHHHhccc----ch---hhhc--CCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--CcE----EEEECC
Confidence 578999987655321 00 1111 12 467789999998888987654 4788777542 222 333442
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCC
Q 004314 380 PARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGV 459 (761)
Q Consensus 380 p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~ 459 (761)
+++ .+ ++++.+.+.+ ...++.+. ..++..+|+.||++|.+| | +.+.+|||+||.
T Consensus 218 ----~~~-~~----~l~~~~~~~~-------l~~~v~~~----~~~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~g~-- 271 (348)
T TIGR01133 218 ----KND-LE----KVKNVYQELG-------IEAIVTFI----DENMAAAYAAADLVISRA---G-ASTVAELAAAGV-- 271 (348)
T ss_pred ----cch-HH----HHHHHHhhCC-------ceEEecCc----ccCHHHHHHhCCEEEECC---C-hhHHHHHHHcCC--
Confidence 222 12 3344443322 12233332 227899999999999865 4 689999999986
Q ss_pred CCCCCCCCCCCCCCceEEEcCCCCCc-------ccc---cCcEEECCCC--HHHHHHHHHHHHcCCHHHHHHHHHHHhhH
Q 004314 460 SGSESSSESSAPKKSMLVVSEFIGCS-------PSL---SGAIRVNPWN--IEATAEAMHEAIQMNEAEKQLRHEKHYRY 527 (761)
Q Consensus 460 ~~~~~~~~~~~~~~g~lV~Se~~G~~-------~~l---~~al~VnP~d--~~~~A~ai~~aL~m~~~er~~r~~~~~~~ 527 (761)
|+|++.+.|.. +.+ ..|++++|.| +++++++|.++++. ++.++.+.++.+++
T Consensus 272 ---------------Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~ 335 (348)
T TIGR01133 272 ---------------PAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLD-PANLEAMAEAARKL 335 (348)
T ss_pred ---------------CEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcC-HHHHHHHHHHHHhc
Confidence 88887765522 334 2488898876 99999999999975 44566666678888
Q ss_pred HhhCCHHHHHH
Q 004314 528 VSTHDVAYWAR 538 (761)
Q Consensus 528 v~~~~~~~Wa~ 538 (761)
+.++...++++
T Consensus 336 ~~~~~~~~i~~ 346 (348)
T TIGR01133 336 AKPDAAKRIAE 346 (348)
T ss_pred CCccHHHHHHh
Confidence 88776666654
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.13 E-value=7e-10 Score=113.83 Aligned_cols=72 Identities=19% Similarity=0.164 Sum_probs=61.9
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC-CceEEccCCeEEeecC
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSA 666 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~-~l~liaehGa~ir~~~ 666 (761)
.|+|++|+||||++ .+...+++++++|++|.+ ++..|+++|||++..+.+.+..++ +..+|++||+.+...+
T Consensus 1 ik~v~~DlDGTLl~---~~~~i~~~~~~~i~~l~~-~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~ 73 (215)
T TIGR01487 1 IKLVAIDIDGTLTE---PNRMISERAIEAIRKAEK-KGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNK 73 (215)
T ss_pred CcEEEEecCCCcCC---CCcccCHHHHHHHHHHHH-CCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCC
Confidence 37999999999997 355688999999999986 799999999999999999877653 2468999999999864
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=99.11 E-value=4.5e-10 Score=115.67 Aligned_cols=69 Identities=16% Similarity=0.126 Sum_probs=57.6
Q ss_pred eEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC-C-ceEEccCCeEEeec
Q 004314 593 AILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-K-LGIAAEHGYFMRWS 665 (761)
Q Consensus 593 lI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~-~-l~liaehGa~ir~~ 665 (761)
+|++|+||||++. +...+++++++|++|.+ .+..|+++|||+...+..++..+. + ..+||+||+.|+..
T Consensus 1 ~i~~DlDGTLL~~---~~~~~~~~~~~l~~l~~-~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~ 71 (221)
T TIGR02463 1 WVFSDLDGTLLDS---HSYDWQPAAPWLTRLQE-AGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENGAAIHLE 71 (221)
T ss_pred CEEEeCCCCCcCC---CCCCcHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCCcEEEcC
Confidence 5899999999973 33355569999999985 689999999999999999987653 2 46999999999875
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=99.09 E-value=6.2e-10 Score=115.97 Aligned_cols=152 Identities=14% Similarity=0.182 Sum_probs=93.2
Q ss_pred eEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC---CceEEccCCeEEeecCC--
Q 004314 593 AILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK---KLGIAAEHGYFMRWSAD-- 667 (761)
Q Consensus 593 lI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~---~l~liaehGa~ir~~~~-- 667 (761)
||++||||||++. +...++.. .+|+ + .++++.++++|||+...+.+.+..+. ...+|++||+.|+.+..
T Consensus 1 li~~DlDgTLl~~---~~~~~~~~-~~~~-~-~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~nGa~i~~~~~~~ 74 (236)
T TIGR02471 1 LIITDLDNTLLGD---DEGLASFV-ELLR-G-SGDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARVGTEIYYGPELQ 74 (236)
T ss_pred CeEEeccccccCC---HHHHHHHH-HHHH-h-cCCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECCCceEEeCCCCC
Confidence 6899999999983 33344444 7776 4 45789999999999999999987652 12389999999976531
Q ss_pred --cceeecCcCcCcchHHHHHHHHHHHhcCCCccEEEecCc--eEEEEcccCCCCCchHHHHHHHHHHHHHhcCCCcEE-
Q 004314 668 --EEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKES--ALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAV- 742 (761)
Q Consensus 668 --~~w~~~~~~~~~~w~~~v~~im~~y~~~t~Gs~iE~k~~--~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~~v~V- 742 (761)
..|.. .....|.. ..+ ..+....+|..++.+.. ...++++..+... ....++.+.+... ...+.+
T Consensus 75 ~~~~~~~---~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~l~~~--~~~~~~~ 144 (236)
T TIGR02471 75 PDRFWQK---HIDHDWRR--QAV-VEALADIPGLTLQDDQEQGPFKISYLLDPEGE--PILPQIRQRLRQQ--SQAAKVI 144 (236)
T ss_pred CChhHHH---HHhcCCCH--HHH-HHHHhcCCCcEeCChhcCCCeeEEEEECcccc--hHHHHHHHHHHhc--cCCEEEE
Confidence 11210 01112221 122 23334567777776652 3556666432221 1233444444432 123443
Q ss_pred EeCCeEEEEEeCCCCcCC
Q 004314 743 KSGQFIVEVKPQVYIQLR 760 (761)
Q Consensus 743 ~~G~~~vEV~p~gvnKG~ 760 (761)
.++..++|+.|+++|||.
T Consensus 145 ~~~~~~~ei~~~~~~K~~ 162 (236)
T TIGR02471 145 LSCGWFLDVLPLRASKGL 162 (236)
T ss_pred EECCceEEEeeCCCChHH
Confidence 567788999999999985
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=2.5e-09 Score=113.50 Aligned_cols=71 Identities=18% Similarity=0.265 Sum_probs=61.1
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC-CceEEccCCeEEeec
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWS 665 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~-~l~liaehGa~ir~~ 665 (761)
.|+|++|+||||++ .+...+++++++|++|.+ +|..|+++|||++..+.+.+..+. +..+|++||+.++..
T Consensus 3 ~kli~~DlDGTLl~---~~~~i~~~~~~ai~~~~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~ 74 (272)
T PRK10530 3 YRVIALDLDGTLLT---PKKTILPESLEALARARE-AGYKVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDY 74 (272)
T ss_pred ccEEEEeCCCceEC---CCCccCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEec
Confidence 68999999999997 345678899999999996 699999999999999988887653 345899999999864
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.2e-09 Score=112.49 Aligned_cols=69 Identities=20% Similarity=0.209 Sum_probs=58.7
Q ss_pred EEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC-CceEEccCCeEEeecC
Q 004314 594 ILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSA 666 (761)
Q Consensus 594 I~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~-~l~liaehGa~ir~~~ 666 (761)
|++|+||||++. ....+++++++|++|.+ .+..|+++|||+...+.+++..+. ...+|++||+.+...+
T Consensus 1 i~~DlDGTLl~~---~~~i~~~~~~al~~l~~-~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~ 70 (225)
T TIGR01482 1 IASDIDGTLTDP---NRAINESALEAIRKAES-VGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNE 70 (225)
T ss_pred CeEeccCccCCC---CcccCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCC
Confidence 689999999983 45678999999999986 699999999999999888876554 4579999999998764
|
catalyze the same reaction as SPP. |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.05 E-value=2.8e-09 Score=123.67 Aligned_cols=73 Identities=16% Similarity=0.152 Sum_probs=60.4
Q ss_pred ccceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC---Cc-------eEEccC
Q 004314 589 SKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK---KL-------GIAAEH 658 (761)
Q Consensus 589 s~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~---~l-------~liaeh 658 (761)
.+.|+|++|+||||++ .++..+++++++|++|.+ .|..|+|+|||++..+.+.+..+. .. .+|+.|
T Consensus 306 ~~iKLIa~DLDGTLLn---~d~~Is~~t~eAI~kl~e-kGi~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~~p~I~~N 381 (580)
T PLN02887 306 PKFSYIFCDMDGTLLN---SKSQISETNAKALKEALS-RGVKVVIATGKARPAVIDILKMVDLAGKDGIISESSPGVFLQ 381 (580)
T ss_pred cCccEEEEeCCCCCCC---CCCccCHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHhCcccccceEeecccEEeec
Confidence 3689999999999998 356789999999999996 699999999999999988886542 11 355679
Q ss_pred CeEEeec
Q 004314 659 GYFMRWS 665 (761)
Q Consensus 659 Ga~ir~~ 665 (761)
|+.|+..
T Consensus 382 GA~I~d~ 388 (580)
T PLN02887 382 GLLVYGR 388 (580)
T ss_pred CeEEEEC
Confidence 9999854
|
|
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.1e-07 Score=111.46 Aligned_cols=182 Identities=14% Similarity=0.143 Sum_probs=120.3
Q ss_pred CCCeEEEeecCccccCChHHHHHHHHHHHH--hCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCC
Q 004314 334 EGKTVLLGVDDMDIFKGVDLKLLAMEHLLK--QHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGY 411 (761)
Q Consensus 334 ~~~~vil~VdRld~~KGi~~~l~A~~~ll~--~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~ 411 (761)
++..++..|.|+...||+.+++.+++++++ ++|+. .+.+|..|.....+. .-.++.+.+.+++++ ..|. +
T Consensus 387 pd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~--pvq~V~~Gka~p~d~-~gk~~i~~i~~la~~--~~~~--~- 458 (601)
T TIGR02094 387 PDVLTIGFARRFATYKRADLIFRDLERLARILNNPER--PVQIVFAGKAHPADG-EGKEIIQRIVEFSKR--PEFR--G- 458 (601)
T ss_pred CCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCC--CeEEEEEEecCcccc-hHHHHHHHHHHHHhc--ccCC--C-
Confidence 356688899999999999999999999985 55652 366776665432221 123455566666543 0121 1
Q ss_pred ccEEEEcCCCCHHHHHHHHHhccccee-ccc-ccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcccc-
Q 004314 412 EPVVFIDKPVTLSERAAYYTIAECVVV-TAV-RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL- 488 (761)
Q Consensus 412 ~pV~~~~~~v~~~el~aly~~ADv~vv-tS~-~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l- 488 (761)
.|+|+. ..+..--..+|+.||+++. ||. .|.-|+.-+-||.- |.|-.|-.-|...+.
T Consensus 459 -kv~f~~-~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~n------------------GgL~~sv~DG~~~E~~ 518 (601)
T TIGR02094 459 -RIVFLE-NYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMN------------------GVLNLSILDGWWGEGY 518 (601)
T ss_pred -CEEEEc-CCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHc------------------CCceeecccCcccccC
Confidence 477775 4566666778999999999 777 89999999888884 345566566654443
Q ss_pred --cCcEEECC------------CCHHHHHHHHHHHHc-----CCH----HHHHHHHHH-HhhHHhhCCHHHHHHHHHHH
Q 004314 489 --SGAIRVNP------------WNIEATAEAMHEAIQ-----MNE----AEKQLRHEK-HYRYVSTHDVAYWARSFFQD 543 (761)
Q Consensus 489 --~~al~VnP------------~d~~~~A~ai~~aL~-----m~~----~er~~r~~~-~~~~v~~~~~~~Wa~~~l~~ 543 (761)
.+|+.+.+ .|.+++-++|.+++- .++ .+...++++ |..-...+++.+-++.|...
T Consensus 519 ~~~nGf~f~~~~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~ 597 (601)
T TIGR02094 519 DGDNGWAIGDGEEYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDK 597 (601)
T ss_pred CCCcEEEECCCccccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHH
Confidence 24788875 899999999988772 211 123333333 22223357888888877654
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=99.04 E-value=2.3e-09 Score=113.08 Aligned_cols=71 Identities=13% Similarity=0.041 Sum_probs=57.8
Q ss_pred eEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC-CceEEccCCeEEeecCC
Q 004314 593 AILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSAD 667 (761)
Q Consensus 593 lI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~-~l~liaehGa~ir~~~~ 667 (761)
+|++|+||||+... ....++++++|++|.+ .+..|+++|||+...+.+++..+. .-++|++||+.+...++
T Consensus 1 li~~DlDGTll~~~---~~~~~~~~~~i~~l~~-~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~ 72 (256)
T TIGR01486 1 WIFTDLDGTLLDPH---GYDWGPAKEVLERLQE-LGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRG 72 (256)
T ss_pred CEEEcCCCCCcCCC---CcCchHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCC
Confidence 68999999999743 3233468999999986 699999999999999999887653 24799999999987643
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.8e-09 Score=121.38 Aligned_cols=161 Identities=15% Similarity=0.147 Sum_probs=97.6
Q ss_pred HhccceeEEecCCCcCCCCCCCCCCCC-HHHHHHHHHHHhcCCCeEEEEcCCChhhHHhh---ccCC-CCceEEccCCeE
Q 004314 587 LRSKSRAILFDYDGTVMPQTSINKAPS-QAVISIINTLCNDARNTVFVVSGRGRDCLGKW---FSPC-KKLGIAAEHGYF 661 (761)
Q Consensus 587 ~~s~~rlI~lDyDGTL~~~~~~~~~p~-~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~---f~~~-~~l~liaehGa~ 661 (761)
..+.+.+|++|+||||++.. .++..+ .++..+++++.+ ++..++++|||+.....+. |... |++ +|+.||+.
T Consensus 5 ~~~~~~lI~sDLDGTLL~~~-~~~~~s~~~~~~l~~~~~~-~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~-~I~~nGt~ 81 (413)
T PLN02382 5 SGSPRLMIVSDLDHTMVDHH-DPENLSLLRFNALWEAEYR-HDSLLVFSTGRSPTLYKELRKEKPLLTPDI-TIMSVGTE 81 (413)
T ss_pred cCCCCEEEEEcCCCcCcCCC-CccchhHHHHHHHHHHhhc-CCeeEEEEcCCCHHHHHHHHHhCCCCCCCE-EEEcCCcE
Confidence 45668899999999999743 122344 445555588775 6889999999995555444 4432 443 56679999
Q ss_pred EeecC----CcceeecCcCcCcchH-HHHHHHHHHHhcCCCccEEEecCceEEEEcccCCCCCchHHHHHHHHHHHHHhc
Q 004314 662 MRWSA----DEEWQNCGQSVDFGWI-QIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLA 736 (761)
Q Consensus 662 ir~~~----~~~w~~~~~~~~~~w~-~~v~~im~~y~~~t~Gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~ 736 (761)
|...+ +..|... .+..|. ..+.+.+..|.........+++...+.+++.+. .+.++.+.|.+.+.
T Consensus 82 I~~~~~~~~d~~w~~~---l~~~w~~~~v~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~-------~~~~~~~~l~~~~~ 151 (413)
T PLN02382 82 IAYGESMVPDHGWVEY---LNKKWDREIVVEETSKFPELKLQPETEQRPHKVSFYVDKK-------KAQEVIKELSERLE 151 (413)
T ss_pred EEeCCCCccChhHHHH---HhccCChhhHHHHHhcCCCcccCCcccCCCeEEEEEechH-------HhHHHHHHHHHHHH
Confidence 98743 1223321 223454 223333444432233445555667777765432 22344555555543
Q ss_pred C--CCcEE-EeCCeEEEEEeCCCCcCC
Q 004314 737 N--EPAAV-KSGQFIVEVKPQVYIQLR 760 (761)
Q Consensus 737 ~--~~v~V-~~G~~~vEV~p~gvnKG~ 760 (761)
. ..+.+ .+|..++||.|+++|||.
T Consensus 152 ~~g~~~~i~~s~~~~ldI~p~g~sKg~ 178 (413)
T PLN02382 152 KRGLDVKIIYSGGIDLDVLPQGAGKGQ 178 (413)
T ss_pred hcCCcEEEEEECCcEEEEEeCCCCHHH
Confidence 3 23444 578899999999999984
|
|
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=98.93 E-value=2.3e-09 Score=100.97 Aligned_cols=128 Identities=21% Similarity=0.259 Sum_probs=89.8
Q ss_pred CeEEEeecCccccCChHHHHH-HHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccE
Q 004314 336 KTVLLGVDDMDIFKGVDLKLL-AMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPV 414 (761)
Q Consensus 336 ~~vil~VdRld~~KGi~~~l~-A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV 414 (761)
..++++.|++...||+..+++ |++++.+++|+++ |+++|. +++ +++++ + ...|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~----l~i~G~-----~~~------~l~~~----~-------~~~v 55 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIE----LIIIGN-----GPD------ELKRL----R-------RPNV 55 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEE----EEEECE-----SS-------HHCCH----H-------HCTE
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEE----EEEEeC-----CHH------HHHHh----c-------CCCE
Confidence 357889999999999999999 9999999999755 887775 222 12222 1 1247
Q ss_pred EEEcCCCCHHHHHHHHHhcccceeccc-ccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---C
Q 004314 415 VFIDKPVTLSERAAYYTIAECVVVTAV-RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---G 490 (761)
Q Consensus 415 ~~~~~~v~~~el~aly~~ADv~vvtS~-~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ 490 (761)
.+.+ .+ +|+.++|+.||+++.|+. .+|++...+|||++|. |+|+|.. |+...+. .
T Consensus 56 ~~~g-~~--~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~-----------------pvi~~~~-~~~~~~~~~~~ 114 (135)
T PF13692_consen 56 RFHG-FV--EELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGK-----------------PVIASDN-GAEGIVEEDGC 114 (135)
T ss_dssp EEE--S---HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT-------------------EEEEHH-HCHCHS---SE
T ss_pred EEcC-CH--HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCC-----------------CEEECCc-chhhheeecCC
Confidence 7654 55 689999999999999985 7899999999999976 8999888 5555552 3
Q ss_pred cEEECCCCHHHHHHHHHHHHc
Q 004314 491 AIRVNPWNIEATAEAMHEAIQ 511 (761)
Q Consensus 491 al~VnP~d~~~~A~ai~~aL~ 511 (761)
++.+ +.|+++++++|.+++.
T Consensus 115 ~~~~-~~~~~~l~~~i~~l~~ 134 (135)
T PF13692_consen 115 GVLV-ANDPEELAEAIERLLN 134 (135)
T ss_dssp EEE--TT-HHHHHHHHHHHHH
T ss_pred eEEE-CCCHHHHHHHHHHHhc
Confidence 6666 8899999999999885
|
|
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=98.93 E-value=6.7e-08 Score=107.51 Aligned_cols=141 Identities=16% Similarity=0.166 Sum_probs=92.9
Q ss_pred HHHHHcC---CCeE-EEe-ecCccccCC-hHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHH
Q 004314 328 ELKQQFE---GKTV-LLG-VDDMDIFKG-VDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKR 401 (761)
Q Consensus 328 ~lr~~~~---~~~v-il~-VdRld~~KG-i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~ 401 (761)
.++++++ ++++ ++. -.|....|+ +...++|++.+.+++|+++ +++++. +++.. +++++++.+
T Consensus 175 ~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~----~ii~~~----~~~~~----~~~~~~~~~ 242 (380)
T PRK00025 175 AARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLR----FVLPLV----NPKRR----EQIEEALAE 242 (380)
T ss_pred HHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeE----EEEecC----ChhhH----HHHHHHHhh
Confidence 3445552 4444 333 347766544 6888999999988888754 666653 12222 333444332
Q ss_pred HhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEc--
Q 004314 402 INETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVS-- 479 (761)
Q Consensus 402 in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~S-- 479 (761)
.. | . .+.++. .++..+|+.||+++++| |.+.+|+|+||. |+|++
T Consensus 243 ~~---~---~-~v~~~~-----~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G~-----------------PvI~~~~ 288 (380)
T PRK00025 243 YA---G---L-EVTLLD-----GQKREAMAAADAALAAS-----GTVTLELALLKV-----------------PMVVGYK 288 (380)
T ss_pred cC---C---C-CeEEEc-----ccHHHHHHhCCEEEECc-----cHHHHHHHHhCC-----------------CEEEEEc
Confidence 20 1 1 244443 37899999999999998 778889999986 77766
Q ss_pred ---------------CCCCCcccccC-----cEEECCCCHHHHHHHHHHHHcCCH
Q 004314 480 ---------------EFIGCSPSLSG-----AIRVNPWNIEATAEAMHEAIQMNE 514 (761)
Q Consensus 480 ---------------e~~G~~~~l~~-----al~VnP~d~~~~A~ai~~aL~m~~ 514 (761)
.+.|..+.+.+ .++++..|++++++++..+|+.++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~ 343 (380)
T PRK00025 289 VSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLADGA 343 (380)
T ss_pred cCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCHH
Confidence 34454555532 366788899999999999998653
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=6.3e-09 Score=120.50 Aligned_cols=74 Identities=12% Similarity=0.086 Sum_probs=62.1
Q ss_pred ccceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC-CceEEccCCeEEeecC
Q 004314 589 SKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSA 666 (761)
Q Consensus 589 s~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~-~l~liaehGa~ir~~~ 666 (761)
.++|+|++|+||||++. +...+++++++|++|.+ .+..|+++|||+...+..++..+. +..+|++||+.|..+.
T Consensus 414 ~~~KLIfsDLDGTLLd~---d~~i~~~t~eAL~~L~e-kGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~eNGA~I~~~~ 488 (694)
T PRK14502 414 QFKKIVYTDLDGTLLNP---LTYSYSTALDALRLLKD-KELPLVFCSAKTMGEQDLYRNELGIKDPFITENGGAIFIPK 488 (694)
T ss_pred ceeeEEEEECcCCCcCC---CCccCHHHHHHHHHHHH-cCCeEEEEeCCCHHHHHHHHHHcCCCCeEEEcCCCEEEECC
Confidence 36899999999999984 33456789999999996 699999999999999988887653 2469999999999864
|
|
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.3e-07 Score=103.78 Aligned_cols=251 Identities=12% Similarity=0.053 Sum_probs=143.2
Q ss_pred HHHHhCCCCCEEEEeCCccch--HHH-HHHH-hcCCCeEEEEEecCCCchhHHhcCc-chHHHHHHhhhcCEEeeeCHHH
Q 004314 193 VIEVINPEDDYVWIHDYHLMV--LPT-FLRR-RFTRLRMGFFLHSPFPSSEIYRTLP-VREEILKALLNADLIGFHTFDY 267 (761)
Q Consensus 193 i~~~~~~~~DiVwvhDyhl~l--lp~-~lr~-~~~~~~ig~flH~PfP~~e~fr~lp-~r~~il~~ll~~DligF~t~~~ 267 (761)
++..+++ +|+|++|..-+.. ++. ++++ +..++|+++++|--+|-. +.... ........+-.||.|..++...
T Consensus 58 ~~~~~~~-~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~--~~~~~~~~~~~~~~~~~aD~iI~~S~~~ 134 (333)
T PRK09814 58 ILASLKP-GDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLR--FDSNYYLMKEEIDMLNLADVLIVHSKKM 134 (333)
T ss_pred HHhcCCC-CCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHh--ccccchhhHHHHHHHHhCCEEEECCHHH
Confidence 4444666 4999999754332 222 2222 112699999999877632 11111 1222334455789999999876
Q ss_pred HHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccc
Q 004314 268 ARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDI 347 (761)
Q Consensus 268 ~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~ 347 (761)
.+.+.+ .|.. ..++.++|+..+...... +....+++.|+++||+..
T Consensus 135 ~~~l~~-----~g~~---------------~~~i~~~~~~~~~~~~~~--------------~~~~~~~~~i~yaG~l~k 180 (333)
T PRK09814 135 KDRLVE-----EGLT---------------TDKIIVQGIFDYLNDIEL--------------VKTPSFQKKINFAGNLEK 180 (333)
T ss_pred HHHHHH-----cCCC---------------cCceEecccccccccccc--------------cccccCCceEEEecChhh
Confidence 666542 1221 112333343322211100 011234568999999994
Q ss_pred cCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHH
Q 004314 348 FKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERA 427 (761)
Q Consensus 348 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~ 427 (761)
..++ .+..|+. .|+++|. |++.. .. ...|.|. |.++.+|+.
T Consensus 181 ~~~l----------~~~~~~~----~l~i~G~-----g~~~~-----------~~--------~~~V~f~-G~~~~eel~ 221 (333)
T PRK09814 181 SPFL----------KNWSQGI----KLTVFGP-----NPEDL-----------EN--------SANISYK-GWFDPEELP 221 (333)
T ss_pred chHH----------HhcCCCC----eEEEECC-----Ccccc-----------cc--------CCCeEEe-cCCCHHHHH
Confidence 3321 1124544 4777763 32211 00 1247655 689999999
Q ss_pred HHHHhcccceecccc-----------cCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEE
Q 004314 428 AYYTIAECVVVTAVR-----------DGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIR 493 (761)
Q Consensus 428 aly~~ADv~vvtS~~-----------EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~ 493 (761)
.+|+. |+++++.-. -.++--..||||||. |+|++..++.++.+. .|+.
T Consensus 222 ~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~-----------------PVI~~~~~~~~~~V~~~~~G~~ 283 (333)
T PRK09814 222 NELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGL-----------------PVIVWSKAAIADFIVENGLGFV 283 (333)
T ss_pred HHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCC-----------------CEEECCCccHHHHHHhCCceEE
Confidence 99998 666654321 223344778999986 999999999888883 3888
Q ss_pred ECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHH
Q 004314 494 VNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQ 542 (761)
Q Consensus 494 VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~ 542 (761)
|+ +.++++++|... ++++++++.++.++........+..+.-+.
T Consensus 284 v~--~~~el~~~l~~~---~~~~~~~m~~n~~~~~~~~~~g~~~~~~~~ 327 (333)
T PRK09814 284 VD--SLEELPEIIDNI---TEEEYQEMVENVKKISKLLRNGYFTKKALV 327 (333)
T ss_pred eC--CHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHhcchhHHHHHH
Confidence 88 688999998873 355555555555555544333444444333
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.88 E-value=7e-09 Score=110.54 Aligned_cols=72 Identities=11% Similarity=0.090 Sum_probs=60.3
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC-CceEEccCCeEEeecC
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSA 666 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~-~l~liaehGa~ir~~~ 666 (761)
.|+|++|+||||++. +...+++++++|++|.+ .+..|+|+|||+...+...+..+. .-+++++||+.|+.++
T Consensus 4 ~kli~~DlDGTLl~~---~~~~~~~~~~ai~~l~~-~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~ 76 (273)
T PRK00192 4 KLLVFTDLDGTLLDH---HTYSYEPAKPALKALKE-KGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPK 76 (273)
T ss_pred ceEEEEcCcccCcCC---CCcCcHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEecc
Confidence 689999999999983 34566889999999985 689999999999999888887653 2368999999998753
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.87 E-value=8.8e-09 Score=108.49 Aligned_cols=71 Identities=17% Similarity=0.141 Sum_probs=60.7
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC-CceEEccCCeEEeec
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWS 665 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~-~l~liaehGa~ir~~ 665 (761)
.|+||+|+||||++. ....++.++++|++|.+ .++.|+++|||.+..+..++..+. +..+|++||+.|..+
T Consensus 1 ~KLIftDLDGTLLd~---~~~~~~~a~~aL~~Lk~-~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eNGA~I~~p 72 (302)
T PRK12702 1 MRLVLSSLDGSLLDL---EFNSYGAARQALAALER-RSIPLVLYSLRTRAQLEHLCRQLRLEHPFICEDGSAIYVP 72 (302)
T ss_pred CcEEEEeCCCCCcCC---CCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeCCcEEEEc
Confidence 479999999999983 44567889999999996 699999999999999988887652 236999999999876
|
|
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.4e-07 Score=99.50 Aligned_cols=182 Identities=16% Similarity=0.175 Sum_probs=133.5
Q ss_pred CCeEEEeecCccccCChHHHHHHHHHHHHhCCC--CcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCc
Q 004314 335 GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPK--WQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYE 412 (761)
Q Consensus 335 ~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~--~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~ 412 (761)
....+|+++.+.|.|+.. .|+-+...+.++|. .-.++.|+++| ..|+. +-++.-+.++.++++++-. .
T Consensus 268 r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivG-ScRne--eD~ervk~Lkd~a~~L~i~------~ 337 (465)
T KOG1387|consen 268 RENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVG-SCRNE--EDEERVKSLKDLAEELKIP------K 337 (465)
T ss_pred cceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEe-ccCCh--hhHHHHHHHHHHHHhcCCc------c
Confidence 357899999999999999 77777777888887 33457787766 45543 3345556778888877643 2
Q ss_pred cEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCc-ccc---
Q 004314 413 PVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCS-PSL--- 488 (761)
Q Consensus 413 pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~-~~l--- 488 (761)
.|.|. -.+|.+++..+|..|-+.|-+-..|-||+...||||+|. .+|+-.-+|.. +.+
T Consensus 338 ~v~F~-~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGl-----------------Ipi~h~SgGP~lDIV~~~ 399 (465)
T KOG1387|consen 338 HVQFE-KNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAGL-----------------IPIVHNSGGPLLDIVTPW 399 (465)
T ss_pred ceEEE-ecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcCc-----------------eEEEeCCCCCceeeeecc
Confidence 46654 589999999999999999999999999999999999975 22332333311 111
Q ss_pred c---CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHHHHHH
Q 004314 489 S---GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMER 546 (761)
Q Consensus 489 ~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l~~ 546 (761)
. .|++. | +.++-|++|.+++++..+||..+.+..+..+.++.-+...+.|...+..
T Consensus 400 ~G~~tGFla-~-t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~k 458 (465)
T KOG1387|consen 400 DGETTGFLA-P-TDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGELKFDKDWENPICK 458 (465)
T ss_pred CCccceeec-C-ChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHH
Confidence 1 25665 3 5778999999999999988877777788888777766666666544443
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=98.79 E-value=3.3e-09 Score=111.36 Aligned_cols=156 Identities=16% Similarity=0.211 Sum_probs=92.9
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC----CCceEEccCCeEEeec
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC----KKLGIAAEHGYFMRWS 665 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~----~~l~liaehGa~ir~~ 665 (761)
+++||++|+||||++. +....+++.+.|+ ....++..++++|||+.+...+.+... | -.+|+++|+.|.+.
T Consensus 1 ~~~ll~sDlD~Tl~~~---~~~~~~~l~~~l~-~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~P-d~~I~svGt~I~~~ 75 (247)
T PF05116_consen 1 PPRLLASDLDGTLIDG---DDEALARLEELLE-QQARPEILFVYVTGRSLESVLRLLREYNLPQP-DYIITSVGTEIYYG 75 (247)
T ss_dssp -SEEEEEETBTTTBHC---HHHHHHHHHHHHH-HHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE--SEEEETTTTEEEES
T ss_pred CCEEEEEECCCCCcCC---CHHHHHHHHHHHH-HhhCCCceEEEECCCCHHHHHHHHHhCCCCCC-CEEEecCCeEEEEc
Confidence 3689999999999921 1112345556666 333567888999999999988887642 3 34899999999984
Q ss_pred C----CcceeecCcCcCcchH-HHHHHHHHHHhcCCCccEEEecCceEEEEcccCCCCCchHHHHHHHHHHHHHhcCCCc
Q 004314 666 A----DEEWQNCGQSVDFGWI-QIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPA 740 (761)
Q Consensus 666 ~----~~~w~~~~~~~~~~w~-~~v~~im~~y~~~t~Gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~~v 740 (761)
. +..|.. .....|. +.+++++..+..-.+..-.++..+.++|.+...+.. ..++.|+..+....+
T Consensus 76 ~~~~~d~~w~~---~i~~~w~~~~v~~~l~~~~~l~~q~~~~q~~~k~sy~~~~~~~~-------~~~~~i~~~l~~~~l 145 (247)
T PF05116_consen 76 ENWQPDEEWQA---HIDERWDRERVEEILAELPGLRPQPESEQRPFKISYYVDPDDSA-------DILEEIRARLRQRGL 145 (247)
T ss_dssp STTEE-HHHHH---HHHTT--HHHHHHHHHCHCCEEEGGCCCGCCTCECEEEETTSHC-------HHHHHHHHHHHCCTC
T ss_pred CCCcChHHHHH---HHHhcCChHHHHHHHHHhhCcccCCccccCCeeEEEEEecccch-------hHHHHHHHHHHHcCC
Confidence 2 112332 1234565 556666666644333333344456777776654321 233445554444444
Q ss_pred --EE-EeCCeEEEEEeCCCCcCC
Q 004314 741 --AV-KSGQFIVEVKPQVYIQLR 760 (761)
Q Consensus 741 --~V-~~G~~~vEV~p~gvnKG~ 760 (761)
.+ .++...|+|.|+++|||.
T Consensus 146 ~~~~i~s~~~~ldilP~~a~K~~ 168 (247)
T PF05116_consen 146 RVNVIYSNGRDLDILPKGASKGA 168 (247)
T ss_dssp EEEEEECTCCEEEEEETT-SHHH
T ss_pred CeeEEEccceeEEEccCCCCHHH
Confidence 33 468889999999999984
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=98.75 E-value=8e-07 Score=102.81 Aligned_cols=255 Identities=13% Similarity=0.121 Sum_probs=163.6
Q ss_pred HHHHHHHHHHHHHHH----hCCCCCEEE--EeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcc--hHHHHHH
Q 004314 182 YVSANKIFSQRVIEV----INPEDDYVW--IHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPV--REEILKA 253 (761)
Q Consensus 182 Y~~vN~~fa~~i~~~----~~~~~DiVw--vhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~--r~~il~~ 253 (761)
|...+..++..+-+. .. ++|++. .+.-|... +....|..++.+..|+ =+. |. -+..+..
T Consensus 203 f~~~~eLi~efl~~l~~~~~~-~~d~~Iva~Dr~~~~~----~~~~~~~~~~~ls~f~-~~~-------~~~~y~~~l~~ 269 (519)
T TIGR03713 203 YSNMDELIREKFQRYLKVEVK-DDDEIIVASDDRHNFL----VADTFPAKNLIFSLFS-ERN-------RHHTYLDLYES 269 (519)
T ss_pred ECCHHHHHHHHHHHHHHhhCC-CCCEEEEEcCchhhhh----HhhcCccceEEEEecc-Ccc-------cccchhhhhhC
Confidence 444445555544433 33 457777 66677665 3344444445555665 111 21 2456666
Q ss_pred hhhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc
Q 004314 254 LLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF 333 (761)
Q Consensus 254 ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~ 333 (761)
+..+|.+...|.+-.+.... ++ +- .. ...+|..+|++.= +.... ..++.
T Consensus 270 ~~~~d~iIv~T~~q~~~l~~---~~-~~------------~~-~~~~v~~Ip~~~~--~~~~~------------~s~r~ 318 (519)
T TIGR03713 270 LSRADLIIVDREDIERLLEE---NY-RE------------NY-VEFDISRITPFDT--RLRLG------------QSQQL 318 (519)
T ss_pred hhhcCeEEEcCHHHHHHHHH---Hh-hh------------cc-cCCcceeeCccce--EEecC------------hhhcc
Confidence 77788777767554443321 11 10 00 1123445665533 11110 11334
Q ss_pred CCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCC---
Q 004314 334 EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPG--- 410 (761)
Q Consensus 334 ~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~--- 410 (761)
.++.|.+++||+ +.|-+...|+|+.++.+++|+.. |.+.|.. .+ .++.+.++++++++|..++...
T Consensus 319 ~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~----L~~~gy~-----~~-~~~~~~l~~~i~~~~~~~~~~~~~~ 387 (519)
T TIGR03713 319 YETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYE----LKILTYN-----ND-NDITQLLEDILEQINEEYNQDKNFF 387 (519)
T ss_pred cceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeE----EEEEEec-----Cc-hhHHHHHHHHHHHHHhhhchhhhcc
Confidence 567788888899 99999999999999999999976 7766632 11 2345666777777766532210
Q ss_pred -------------------CccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCC
Q 004314 411 -------------------YEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAP 471 (761)
Q Consensus 411 -------------------~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~ 471 (761)
-...+.+.+..+..++.+.|.-|.++|.+|..|||+ ..+|||+.|.
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~Gi-------------- 452 (519)
T TIGR03713 388 SLSEQDENQPILQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISAGI-------------- 452 (519)
T ss_pred ccchhhhhhhcccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcCC--------------
Confidence 002344566677779999999999999999999999 9999999875
Q ss_pred CCceEEEcCCCCCccccc---CcEEECCCCHHHHHHHHHHHHcCCH
Q 004314 472 KKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAIQMNE 514 (761)
Q Consensus 472 ~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~ 514 (761)
|.| --|.++.+. +|++| .|.+++++||...|+.+.
T Consensus 453 ---PqI---nyg~~~~V~d~~NG~li--~d~~~l~~al~~~L~~~~ 490 (519)
T TIGR03713 453 ---PQI---NKVETDYVEHNKNGYII--DDISELLKALDYYLDNLK 490 (519)
T ss_pred ---Cee---ecCCceeeEcCCCcEEe--CCHHHHHHHHHHHHhCHH
Confidence 666 556677773 59999 699999999999999764
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.75 E-value=4.7e-08 Score=101.27 Aligned_cols=69 Identities=17% Similarity=0.179 Sum_probs=57.2
Q ss_pred eEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC-CceEEccCCeEEeecC
Q 004314 593 AILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSA 666 (761)
Q Consensus 593 lI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~-~l~liaehGa~ir~~~ 666 (761)
+|++|+||||++. +. ..++++++|++|.+ .+..|+++|||+...+..++..+. .-++|++||+.|..+.
T Consensus 1 li~~DlDGTLl~~---~~-~~~~~~~ai~~l~~-~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa~I~~~~ 70 (225)
T TIGR02461 1 VIFTDLDGTLLPP---GY-EPGPAREALEELKD-LGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGGAIFIPR 70 (225)
T ss_pred CEEEeCCCCCcCC---CC-CchHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCcEEEecC
Confidence 5899999999983 22 44579999999996 599999999999999988886653 2369999999998864
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=98.70 E-value=8.1e-06 Score=97.73 Aligned_cols=181 Identities=12% Similarity=0.077 Sum_probs=117.0
Q ss_pred eEEEeecCccccCChHHHHHHHHHHHH--hCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccE
Q 004314 337 TVLLGVDDMDIFKGVDLKLLAMEHLLK--QHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPV 414 (761)
Q Consensus 337 ~vil~VdRld~~KGi~~~l~A~~~ll~--~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV 414 (761)
.+|.++.|+..-||..+++..+++|.+ .+|+ ..+.+|..|.....+. .-+++.+++.++++. .+|. + .|
T Consensus 479 ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~--~pvQ~IfaGKAhP~d~-~gK~iIk~i~~~a~~--p~~~--~--kV 549 (778)
T cd04299 479 LTIGFARRFATYKRATLLLRDPERLKRLLNDPE--RPVQFIFAGKAHPADE-PGKELIQEIVEFSRR--PEFR--G--RI 549 (778)
T ss_pred cEEeeeecchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCccch-HHHHHHHHHHHHHhC--cCCC--C--cE
Confidence 378889999999999999999999865 3454 2466776664332221 113444555555441 1221 1 58
Q ss_pred EEEcCCCCHHHHHHHHHhcccceeccc--ccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcccc-c--
Q 004314 415 VFIDKPVTLSERAAYYTIAECVVVTAV--RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL-S-- 489 (761)
Q Consensus 415 ~~~~~~v~~~el~aly~~ADv~vvtS~--~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~-- 489 (761)
+|+. ..+..--..+++.|||++.||. .|.-|+.-+-||.- |.|-+|-.-|...+- .
T Consensus 550 vfle-~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~N------------------G~LnlSvlDGww~E~~~g~ 610 (778)
T cd04299 550 VFLE-DYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALN------------------GGLNLSVLDGWWDEGYDGE 610 (778)
T ss_pred EEEc-CCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHc------------------CCeeeecccCccccccCCC
Confidence 8775 4566667778999999999999 78888777777663 467788777765554 2
Q ss_pred CcEEECC------------CCHHHHHHHHHHHHc----CC-----HHHHHHHHHH-HhhHHhhCCHHHHHHHHHHHHH
Q 004314 490 GAIRVNP------------WNIEATAEAMHEAIQ----MN-----EAEKQLRHEK-HYRYVSTHDVAYWARSFFQDME 545 (761)
Q Consensus 490 ~al~VnP------------~d~~~~A~ai~~aL~----m~-----~~er~~r~~~-~~~~v~~~~~~~Wa~~~l~~l~ 545 (761)
+|..+.+ .|.+++-+.|.+.+. .. +.+...+++. +....-.+++.+-++.|+..+-
T Consensus 611 nGwaig~~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y 688 (778)
T cd04299 611 NGWAIGDGDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFY 688 (778)
T ss_pred CceEeCCCccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhH
Confidence 4788877 455566666654443 10 1234444444 3333346888888888888775
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=98.68 E-value=2.6e-06 Score=97.15 Aligned_cols=300 Identities=16% Similarity=0.235 Sum_probs=147.0
Q ss_pred EEEEeCCccchHHHHHHHhcCCCeEEEEEecCCC-------chhHHhcCcc---hH-----------HHHHH-hhhcCEE
Q 004314 203 YVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFP-------SSEIYRTLPV---RE-----------EILKA-LLNADLI 260 (761)
Q Consensus 203 iVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP-------~~e~fr~lp~---r~-----------~il~~-ll~~Dli 260 (761)
+.+.|.+..-+-.-++|++.|++.-+|+.|-.-+ +.++|..|+. .+ -|-+. -..||..
T Consensus 146 iaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~~AdvF 225 (633)
T PF05693_consen 146 IAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAAHYADVF 225 (633)
T ss_dssp EEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHHHSSEE
T ss_pred EEEechHhHhHHHHHHhccCCCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccCccchHHHHHHHHHHHhcCee
Confidence 5677877766666689999999999999996543 2233444441 11 11111 2334443
Q ss_pred eeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhcc----chHHHHHHHH-HHHc--
Q 004314 261 GFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRL----ADKDWRVQEL-KQQF-- 333 (761)
Q Consensus 261 gF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~----~~~~~~~~~l-r~~~-- 333 (761)
-.-+.--++ -|..+|+ |... .|.|||++.+.|.....- ....+++.++ +..|
T Consensus 226 TTVSeITa~----Ea~~LL~----------------r~pD-vV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~~~f~g 284 (633)
T PF05693_consen 226 TTVSEITAK----EAEHLLK----------------RKPD-VVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVRGHFYG 284 (633)
T ss_dssp EESSHHHHH----HHHHHHS----------------S--S-EE----B-GGGTSSTTHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred eehhhhHHH----HHHHHhC----------------CCCC-EEcCCCccccccccchHHHHHHHHHHHHHHHHHHHHhcc
Confidence 322221110 1122222 2222 257999999887643210 1123333332 3333
Q ss_pred -----CCCeEEEe-ecCccc-cCChHHHHHHHHHHHH---hCCCCcCceeEEEEecCCCCCchh---------HHHHHHH
Q 004314 334 -----EGKTVLLG-VDDMDI-FKGVDLKLLAMEHLLK---QHPKWQGRAVLVQIANPARGRGKD---------LEEIQAE 394 (761)
Q Consensus 334 -----~~~~vil~-VdRld~-~KGi~~~l~A~~~ll~---~~P~~~~~vvLvqi~~p~r~~~~~---------~~~l~~e 394 (761)
.++.++++ .||.++ .||++..|+|+.+|-. .... +.-|+..|-.|+....-. +.++++.
T Consensus 285 ~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~--~~tVVaFii~pa~~~~~~ve~l~~~a~~~~l~~t 362 (633)
T PF05693_consen 285 HYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGS--DKTVVAFIIVPAKTNSFNVESLKGQAVTKQLRDT 362 (633)
T ss_dssp ---S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT---S-EEEEEEE---SEEEE-HHHHHHHHHHHHHHHH
T ss_pred cCCCCccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCC--CCeEEEEEEecCccCCcCHHHHhhHHHHHHHHHH
Confidence 24566555 699995 8999999999998743 2211 222333344465442111 2223333
Q ss_pred HHHHHHHHhccc------CC---------------------------------------------------------CCC
Q 004314 395 IHATCKRINETF------GR---------------------------------------------------------PGY 411 (761)
Q Consensus 395 v~~lv~~in~~~------g~---------------------------------------------------------~~~ 411 (761)
+.++.++|..+- |. .+-
T Consensus 363 ~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~dr 442 (633)
T PF05693_consen 363 VDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPEDR 442 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT-S
T ss_pred HHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCCCc
Confidence 333323221110 10 012
Q ss_pred ccEEEEcCCCCH------HHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCc
Q 004314 412 EPVVFIDKPVTL------SERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCS 485 (761)
Q Consensus 412 ~pV~~~~~~v~~------~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~ 485 (761)
..|+|....++. -+...+.+.+|++|+||.+|+.|.+|+|++|.+. |-|.|..+|..
T Consensus 443 VKVIF~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gV-----------------PsITTnLsGFG 505 (633)
T PF05693_consen 443 VKVIFHPEYLSGTDGIFNLDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGV-----------------PSITTNLSGFG 505 (633)
T ss_dssp EEEEE--S---TTSSSS-S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT-------------------EEEETTBHHH
T ss_pred eEEEEeeccccCCCCCCCCCHHHHhccCceeeeccccccccCChHHHhhcCC-----------------ceeeccchhHH
Confidence 245555433332 3788899999999999999999999999999865 89999999865
Q ss_pred ccc--------cCcEEE-CC--CCH----HHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHH
Q 004314 486 PSL--------SGAIRV-NP--WNI----EATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQ 542 (761)
Q Consensus 486 ~~l--------~~al~V-nP--~d~----~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~ 542 (761)
--+ ..|+.| += .|. +++|+.|.....++..+|.....+..+.-...+|.+...-|.+
T Consensus 506 ~~~~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~ 577 (633)
T PF05693_consen 506 CWMQEHIEDPEEYGVYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEK 577 (633)
T ss_dssp HHHHTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHH
T ss_pred HHHHHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 322 135544 32 233 4566666777788877766555554444444566555444443
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.5e-05 Score=89.27 Aligned_cols=134 Identities=15% Similarity=0.075 Sum_probs=84.4
Q ss_pred CCeEEE--eecCccc-cCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCC
Q 004314 335 GKTVLL--GVDDMDI-FKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGY 411 (761)
Q Consensus 335 ~~~vil--~VdRld~-~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~ 411 (761)
++++|+ +.+|... .|+++..++|++.+.+++|+++ +++.+.+ +... +.++++.+..+ . +.
T Consensus 190 ~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~----~vi~~~~----~~~~----~~~~~~~~~~~----~-~~ 252 (385)
T TIGR00215 190 NGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLR----RVLPVVN----FKRR----LQFEQIKAEYG----P-DL 252 (385)
T ss_pred CCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeE----EEEEeCC----chhH----HHHHHHHHHhC----C-CC
Confidence 555543 4469887 7999999999999999888865 5443322 1111 22233333222 1 11
Q ss_pred ccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEc------------
Q 004314 412 EPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVS------------ 479 (761)
Q Consensus 412 ~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~S------------ 479 (761)
.|.++.+ +...+|++||++|.+| |.+.+|+|+||. |+|++
T Consensus 253 -~v~~~~~-----~~~~~l~aADl~V~~S-----Gt~tlEa~a~G~-----------------P~Vv~yk~~pl~~~~~~ 304 (385)
T TIGR00215 253 -QLHLIDG-----DARKAMFAADAALLAS-----GTAALEAALIKT-----------------PMVVGYRMKPLTFLIAR 304 (385)
T ss_pred -cEEEECc-----hHHHHHHhCCEEeecC-----CHHHHHHHHcCC-----------------CEEEEEcCCHHHHHHHH
Confidence 3554533 3567999999999999 667779999987 44444
Q ss_pred -----CCCCCcccccC--c---EEECCCCHHHHHHHHHHHHcCC
Q 004314 480 -----EFIGCSPSLSG--A---IRVNPWNIEATAEAMHEAIQMN 513 (761)
Q Consensus 480 -----e~~G~~~~l~~--a---l~VnP~d~~~~A~ai~~aL~m~ 513 (761)
.+.+.+..+.+ + ++-+-.+++.+++++.++|+.+
T Consensus 305 ~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 305 RLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLLENG 348 (385)
T ss_pred HHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence 13333333321 1 2224457899999999999877
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.39 E-value=0.00015 Score=79.94 Aligned_cols=301 Identities=19% Similarity=0.262 Sum_probs=173.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEeCCc----cchHHHH--HHHhcCCCeEEEEEecC---------CCchhHHhcCcch
Q 004314 183 VSANKIFSQRVIEVINPEDDYVWIHDYH----LMVLPTF--LRRRFTRLRMGFFLHSP---------FPSSEIYRTLPVR 247 (761)
Q Consensus 183 ~~vN~~fa~~i~~~~~~~~DiVwvhDyh----l~llp~~--lr~~~~~~~ig~flH~P---------fP~~e~fr~lp~r 247 (761)
.+.+++|+- ......|++..||+|--- ...+|-. ||+++|+.++..+.=+| |+..-.-..+|..
T Consensus 32 ~r~~eRfg~-~~~~~~~~~p~vWiHaaSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~~~v~h~YlP~D 110 (419)
T COG1519 32 KRLGERFGF-YKPPVKPEGPLVWIHAASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFGDSVIHQYLPLD 110 (419)
T ss_pred HHHHHHhcc-cCCCCCCCCCeEEEEecchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHcCCCeEEEecCcC
Confidence 456677761 122334667899999755 3344544 89999999998876555 2222222335532
Q ss_pred H-HHHHHh---hhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeE--------------------------------
Q 004314 248 E-EILKAL---LNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIG-------------------------------- 291 (761)
Q Consensus 248 ~-~il~~l---l~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~-------------------------------- 291 (761)
. -.++.. ...|++.|.-.+.=.|++..|.+. |+..---++.+.
T Consensus 111 ~~~~v~rFl~~~~P~l~Ii~EtElWPnli~e~~~~-~~p~~LvNaRLS~rS~~~y~k~~~~~~~~~~~i~li~aQse~D~ 189 (419)
T COG1519 111 LPIAVRRFLRKWRPKLLIIMETELWPNLINELKRR-GIPLVLVNARLSDRSFARYAKLKFLARLLFKNIDLILAQSEEDA 189 (419)
T ss_pred chHHHHHHHHhcCCCEEEEEeccccHHHHHHHHHc-CCCEEEEeeeechhhhHHHHHHHHHHHHHHHhcceeeecCHHHH
Confidence 2 122332 345666666666666666655431 111000000000
Q ss_pred ---EEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCC-CeEEEeecCccccCChHHHHHHHHHHHHhCCC
Q 004314 292 ---LEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEG-KTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPK 367 (761)
Q Consensus 292 ---~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~-~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~ 367 (761)
...+.+. |.+.. +..... ...+........+|.++++ +++++..+. ...--...+.|+..|++++|+
T Consensus 190 ~Rf~~LGa~~--v~v~G---NlKfd~--~~~~~~~~~~~~~r~~l~~~r~v~iaaST--H~GEeei~l~~~~~l~~~~~~ 260 (419)
T COG1519 190 QRFRSLGAKP--VVVTG---NLKFDI--EPPPQLAAELAALRRQLGGHRPVWVAAST--HEGEEEIILDAHQALKKQFPN 260 (419)
T ss_pred HHHHhcCCcc--eEEec---ceeecC--CCChhhHHHHHHHHHhcCCCCceEEEecC--CCchHHHHHHHHHHHHhhCCC
Confidence 0011111 11111 111111 1123344566778888876 888888887 233334478899999999998
Q ss_pred CcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCC-------CCccEEEEcCCCCHHHHHHHHHhccccee-c
Q 004314 368 WQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRP-------GYEPVVFIDKPVTLSERAAYYTIAECVVV-T 439 (761)
Q Consensus 368 ~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~-------~~~pV~~~~~~v~~~el~aly~~ADv~vv-t 439 (761)
.. |+ ++ | +-++ =-..+++++++.|-+++.- ..++|.+.+ +.-|+..||++||++.| -
T Consensus 261 ~l----lI-lV-P---RHpE---Rf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~D---tmGEL~l~y~~adiAFVGG 325 (419)
T COG1519 261 LL----LI-LV-P---RHPE---RFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGD---TMGELGLLYGIADIAFVGG 325 (419)
T ss_pred ce----EE-Ee-c---CChh---hHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEe---cHhHHHHHHhhccEEEECC
Confidence 63 43 33 3 2333 2356778888877665321 122455443 37799999999999887 4
Q ss_pred cc--ccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCC----CCcccc---cCcEEECCCCHHHHHHHHHHHH
Q 004314 440 AV--RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFI----GCSPSL---SGAIRVNPWNIEATAEAMHEAI 510 (761)
Q Consensus 440 S~--~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~----G~~~~l---~~al~VnP~d~~~~A~ai~~aL 510 (761)
|+ .-|-| ++|..+|+. |+|.-.++ -+.+.+ ++++.|+. .+.++++++..+
T Consensus 326 Slv~~GGHN--~LEpa~~~~-----------------pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~~--~~~l~~~v~~l~ 384 (419)
T COG1519 326 SLVPIGGHN--PLEPAAFGT-----------------PVIFGPYTFNFSDIAERLLQAGAGLQVED--ADLLAKAVELLL 384 (419)
T ss_pred cccCCCCCC--hhhHHHcCC-----------------CEEeCCccccHHHHHHHHHhcCCeEEECC--HHHHHHHHHHhc
Confidence 44 34555 789999865 67755443 333333 24677775 788888888877
Q ss_pred cCCHHHHHHHHHHHhhHHhhC
Q 004314 511 QMNEAEKQLRHEKHYRYVSTH 531 (761)
Q Consensus 511 ~m~~~er~~r~~~~~~~v~~~ 531 (761)
+. +++|..+.++....|.++
T Consensus 385 ~~-~~~r~~~~~~~~~~v~~~ 404 (419)
T COG1519 385 AD-EDKREAYGRAGLEFLAQN 404 (419)
T ss_pred CC-HHHHHHHHHHHHHHHHHh
Confidence 76 667777778888888766
|
|
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=98.17 E-value=4.7e-06 Score=73.44 Aligned_cols=87 Identities=18% Similarity=0.228 Sum_probs=71.2
Q ss_pred cceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc-C--cEEECCCCHHHHHHHHHHHHc
Q 004314 435 CVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-G--AIRVNPWNIEATAEAMHEAIQ 511 (761)
Q Consensus 435 v~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~--al~VnP~d~~~~A~ai~~aL~ 511 (761)
+++.|+..+|+++..+|+||||. |+|.+...++.+.+. + ++.++ |++++++++..+++
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~-----------------~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll~ 61 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGT-----------------PVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLLE 61 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCC-----------------eEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHHC
Confidence 46778888999999999999974 777777777777773 3 67777 99999999999999
Q ss_pred CCHHHHHHHHHHHhhHHh-hCCHHHHHHHHH
Q 004314 512 MNEAEKQLRHEKHYRYVS-THDVAYWARSFF 541 (761)
Q Consensus 512 m~~~er~~r~~~~~~~v~-~~~~~~Wa~~~l 541 (761)
.| ++++...++.+++|. .|++.+=++.++
T Consensus 62 ~~-~~~~~ia~~a~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 62 NP-EERRRIAKNARERVLKRHTWEHRAEQIL 91 (92)
T ss_pred CH-HHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 65 577777888899987 688877777665
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.09 E-value=3.8e-05 Score=76.75 Aligned_cols=72 Identities=24% Similarity=0.278 Sum_probs=56.2
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC--CCCceEEccCCeEEeecC
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP--CKKLGIAAEHGYFMRWSA 666 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~--~~~l~liaehGa~ir~~~ 666 (761)
-.++||+|+||||+|.. ... +....+|.+|. |.+..|+.+|...+..+..+-.. ++.+.+|||||+-|+.+.
T Consensus 6 ~~~lIFtDlD~TLl~~~-ye~---~pA~pv~~el~-d~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~iaEnG~aI~~p~ 79 (274)
T COG3769 6 MPLLIFTDLDGTLLPHS-YEW---QPAAPVLLELK-DAGVPVILCSSKTRAEMLYLQKSLGVQGLPLIAENGAAIYLPK 79 (274)
T ss_pred cceEEEEcccCcccCCC-CCC---CccchHHHHHH-HcCCeEEEeccchHHHHHHHHHhcCCCCCceeecCCceEEecc
Confidence 36899999999999932 222 34556777777 47999999999999876666554 466889999999999873
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=98.09 E-value=6e-06 Score=80.66 Aligned_cols=71 Identities=11% Similarity=0.147 Sum_probs=55.7
Q ss_pred eEEecCCCcCCCCCCC--------CCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhH---HhhccC-------CCCceE
Q 004314 593 AILFDYDGTVMPQTSI--------NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCL---GKWFSP-------CKKLGI 654 (761)
Q Consensus 593 lI~lDyDGTL~~~~~~--------~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L---~~~f~~-------~~~l~l 654 (761)
++++|+||||+..... ....++.+.+++++|.+ .++.|+++|||+.... ++|+.. +|.-.+
T Consensus 1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~-~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~l 79 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQN-NGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPV 79 (157)
T ss_pred CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHH-cCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceE
Confidence 5899999999974310 14678999999999996 6999999999998876 477755 444578
Q ss_pred EccCCeEEee
Q 004314 655 AAEHGYFMRW 664 (761)
Q Consensus 655 iaehGa~ir~ 664 (761)
++.||+.+..
T Consensus 80 i~~~g~~~~~ 89 (157)
T smart00775 80 LLSPDRLFAA 89 (157)
T ss_pred EEcCCcchhh
Confidence 8899998854
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.04 E-value=4.6e-05 Score=74.92 Aligned_cols=166 Identities=16% Similarity=0.235 Sum_probs=111.0
Q ss_pred HHHhccceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC-C-CC-ceEEccCCeE
Q 004314 585 AYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP-C-KK-LGIAAEHGYF 661 (761)
Q Consensus 585 ~y~~s~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~-~-~~-l~liaehGa~ 661 (761)
++++-..-|+++|.||||++ .....++++.+.|++|.+ +.++-+|-|-+.+-+.+-++. + .. -...+|||..
T Consensus 5 a~~r~~~~l~lfdvdgtLt~---~r~~~~~e~~~~l~~lr~--~v~ig~VggsDl~k~~eqlG~~Vl~~fDY~F~ENGl~ 79 (252)
T KOG3189|consen 5 AAARDEETLCLFDVDGTLTP---PRQKVTPEMLEFLQKLRK--KVTIGFVGGSDLSKQQEQLGDNVLEEFDYVFSENGLV 79 (252)
T ss_pred hhhcCCceEEEEecCCcccc---ccccCCHHHHHHHHHHhh--heEEEEeecHHHHHHHHHhchhHHhhhcccccCCCee
Confidence 45566667999999999998 456788999999999885 788999999999988888863 2 21 2366999998
Q ss_pred EeecCCcceeecCcCcCcch------HHHHHHHHHHHhc----CCCccEEEecCceEEEE--cccCCCC----Cc-----
Q 004314 662 MRWSADEEWQNCGQSVDFGW------IQIAEPVMKLYTE----STDGSYIEIKESALVWH--HRDADPG----FG----- 720 (761)
Q Consensus 662 ir~~~~~~w~~~~~~~~~~w------~~~v~~im~~y~~----~t~Gs~iE~k~~~l~~h--yr~ad~d----~~----- 720 (761)
-+..+...-. ..-..| ++.+.-.+.+..+ ...|.+||-..-.+-.. =|+|..+ |.
T Consensus 80 ~yk~gk~~~~----Qsi~~~LGee~~q~liNF~LrYlsdidlPiKRGtFiEFRNgMiNvsPIGR~cs~EER~eF~e~Dkk 155 (252)
T KOG3189|consen 80 AYKGGKLLSK----QSIINHLGEEKLQELINFCLRYLSDIDLPIKRGTFIEFRNGMINVSPIGRNCSQEERNEFEELDKK 155 (252)
T ss_pred EeeCCcchhH----HHHHHHHhHHHHHHHHHHHHHHHHhcCCcccccceEEecCCceeccccccccCHHHHHHHHHhhhh
Confidence 7665432111 111223 2333334444333 34599999776554333 2444321 11
Q ss_pred hHHHHHHHHHHHHHhcCCCcEEE-eCCeEEEEEeCCCCcC
Q 004314 721 SSQAKELLDHLESVLANEPAAVK-SGQFIVEVKPQVYIQL 759 (761)
Q Consensus 721 ~~qa~el~~~L~~~l~~~~v~V~-~G~~~vEV~p~gvnKG 759 (761)
...-..+.+.|++.+++..+... -|+-.++|-|.||+|-
T Consensus 156 ~~iR~K~v~~Lr~~F~~~gLtFSIGGQISfDvFP~GWDKt 195 (252)
T KOG3189|consen 156 HKIREKFVEALREEFADYGLTFSIGGQISFDVFPKGWDKT 195 (252)
T ss_pred hhhHHHHHHHHHHHhcccCeeEEECCeEEEeecCCCcchh
Confidence 11123567888888888888764 5899999999999995
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00012 Score=83.09 Aligned_cols=132 Identities=6% Similarity=0.119 Sum_probs=98.9
Q ss_pred cCCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCc
Q 004314 333 FEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYE 412 (761)
Q Consensus 333 ~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~ 412 (761)
..++.++++ + ...|+|+++|.++.|++. |=+ |..+- ...++.++ ++ | .
T Consensus 281 ~~~~~l~~t-----~----s~~I~~i~~Lv~~lPd~~----f~I-ga~te--------~s~kL~~L-~~----y-----~ 328 (438)
T TIGR02919 281 YRKQALILT-----N----SDQIEHLEEIVQALPDYH----FHI-AALTE--------MSSKLMSL-DK----Y-----D 328 (438)
T ss_pred CcccEEEEC-----C----HHHHHHHHHHHHhCCCcE----EEE-EecCc--------ccHHHHHH-Hh----c-----C
Confidence 345555655 1 899999999999999986 654 54321 11344444 22 2 3
Q ss_pred cEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCC-CCcccccCc
Q 004314 413 PVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFI-GCSPSLSGA 491 (761)
Q Consensus 413 pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~-G~~~~l~~a 491 (761)
.|+.+.+ +...++..+|..||+++.+|..||++++..||+..|. |++.=+.+ |..+.+..+
T Consensus 329 nvvly~~-~~~~~l~~ly~~~dlyLdin~~e~~~~al~eA~~~G~-----------------pI~afd~t~~~~~~i~~g 390 (438)
T TIGR02919 329 NVKLYPN-ITTQKIQELYQTCDIYLDINHGNEILNAVRRAFEYNL-----------------LILGFEETAHNRDFIASE 390 (438)
T ss_pred CcEEECC-cChHHHHHHHHhccEEEEccccccHHHHHHHHHHcCC-----------------cEEEEecccCCcccccCC
Confidence 4666654 4556799999999999999999999999999999765 66654443 555556678
Q ss_pred EEECCCCHHHHHHHHHHHHcCCH
Q 004314 492 IRVNPWNIEATAEAMHEAIQMNE 514 (761)
Q Consensus 492 l~VnP~d~~~~A~ai~~aL~m~~ 514 (761)
.++++.|+++|+++|.++|+.+.
T Consensus 391 ~l~~~~~~~~m~~~i~~lL~d~~ 413 (438)
T TIGR02919 391 NIFEHNEVDQLISKLKDLLNDPN 413 (438)
T ss_pred ceecCCCHHHHHHHHHHHhcCHH
Confidence 89999999999999999999874
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=97.78 E-value=4.2e-05 Score=71.65 Aligned_cols=51 Identities=22% Similarity=0.272 Sum_probs=41.1
Q ss_pred eeEEecCCCcCCCCCC---CCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHH
Q 004314 592 RAILFDYDGTVMPQTS---INKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLG 643 (761)
Q Consensus 592 rlI~lDyDGTL~~~~~---~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~ 643 (761)
|+|++|+||||+.... ....|.++++++|++|.+ .+..|+++|||+.....
T Consensus 2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~-~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKA-LGFEIVISSSRNMRTYE 55 (126)
T ss_pred CEEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHH-CCCEEEEECCCCchhhh
Confidence 6899999999987431 113478999999999985 59999999999987543
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5 | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00041 Score=70.33 Aligned_cols=143 Identities=14% Similarity=0.228 Sum_probs=91.9
Q ss_pred HHHHHHHHHhcCCCeEEEEcCCChhhHHhhcc-C-C-CC-ceEEccCCeEEeecCCcceeecCc-C-cCcchHHHHHHHH
Q 004314 616 VISIINTLCNDARNTVFVVSGRGRDCLGKWFS-P-C-KK-LGIAAEHGYFMRWSADEEWQNCGQ-S-VDFGWIQIAEPVM 689 (761)
Q Consensus 616 ~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~-~-~-~~-l~liaehGa~ir~~~~~~w~~~~~-~-~~~~w~~~v~~im 689 (761)
+.++|.+|.+ +..|.||||-++...++-+. . + .+ -.+.+|||...+..++..|..... . .+...++.+.-++
T Consensus 1 M~~~L~~L~~--~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~~~~~~~~~lgee~~~~~in~~l 78 (220)
T PF03332_consen 1 MAELLQKLRK--KVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELIWSQSIAEFLGEEKLQKLINFCL 78 (220)
T ss_dssp HHHHHHHHHT--TSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEEEE--HHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHh--cCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCchhhHhHHHHcCHHHHHHHHHHHH
Confidence 4678899985 79999999999998888884 2 2 22 358899999998887667764321 1 1122234444444
Q ss_pred HHHhc----CCCccEEEecCceEEEEc--ccCCCC----Cc----hHHH-HHHHHHHHHHhcCCCcEEEe-CCeEEEEEe
Q 004314 690 KLYTE----STDGSYIEIKESALVWHH--RDADPG----FG----SSQA-KELLDHLESVLANEPAAVKS-GQFIVEVKP 753 (761)
Q Consensus 690 ~~y~~----~t~Gs~iE~k~~~l~~hy--r~ad~d----~~----~~qa-~el~~~L~~~l~~~~v~V~~-G~~~vEV~p 753 (761)
++..+ ..-|.+||.....+.+.- |+|..+ |. .... +.+++.|.+.+.+..+.+.. |...+||-|
T Consensus 79 ~~~~~l~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L~~~f~d~~L~~siGGqiSiDvfp 158 (220)
T PF03332_consen 79 RYISDLDLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEALKKEFPDFGLTFSIGGQISIDVFP 158 (220)
T ss_dssp HHHHT---S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHHHHHTCCCSEEEEEETTTEEEEEE
T ss_pred HHHHhCCCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHHHHHCCCCceEEecCCceEEcccc
Confidence 44332 235999999999998874 344211 11 1111 25777888888877788754 999999999
Q ss_pred CCCCcCC
Q 004314 754 QVYIQLR 760 (761)
Q Consensus 754 ~gvnKG~ 760 (761)
+|+||+.
T Consensus 159 ~GwDKty 165 (220)
T PF03332_consen 159 KGWDKTY 165 (220)
T ss_dssp TT-SGGG
T ss_pred CCccHHH
Confidence 9999974
|
4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A. |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00041 Score=73.54 Aligned_cols=75 Identities=13% Similarity=0.149 Sum_probs=56.0
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC--CC-ceEEccCCeEEeec
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC--KK-LGIAAEHGYFMRWS 665 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~--~~-l~liaehGa~ir~~ 665 (761)
..++|++|+||||.+........++.+.++|++|.+ .|..++|+|+++++...+.+..+ .. ...|..+|...+..
T Consensus 125 ~~kvIvFDLDgTLi~~~~~v~irdPgV~EaL~~Lke-kGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~~k 202 (301)
T TIGR01684 125 PPHVVVFDLDSTLITDEEPVRIRDPRIYDSLTELKK-RGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAEEY 202 (301)
T ss_pred cceEEEEecCCCCcCCCCccccCCHHHHHHHHHHHH-CCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCccccCC
Confidence 468999999999998531111225999999999997 58999999999999887777643 22 23667777776553
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00024 Score=65.71 Aligned_cols=70 Identities=16% Similarity=0.173 Sum_probs=53.4
Q ss_pred eEEecCCCcCCCCCCC-----CCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC----CceEEccCCeEEe
Q 004314 593 AILFDYDGTVMPQTSI-----NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK----KLGIAAEHGYFMR 663 (761)
Q Consensus 593 lI~lDyDGTL~~~~~~-----~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~----~l~liaehGa~ir 663 (761)
+++||+||||.+..+. ...+.+.+.+.|++|.+. +..++|+||+....++.++..+. --.++++++....
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 79 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEK-GIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIY 79 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHHHHC-CCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhh
Confidence 5799999999986531 236788999999999974 88999999999999999987531 1235555555543
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0027 Score=67.47 Aligned_cols=73 Identities=15% Similarity=0.112 Sum_probs=52.7
Q ss_pred cceeEEecCCCcCCCCCCCCCCC-CHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC--CC-ceEEccCCeEEee
Q 004314 590 KSRAILFDYDGTVMPQTSINKAP-SQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC--KK-LGIAAEHGYFMRW 664 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p-~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~--~~-l~liaehGa~ir~ 664 (761)
..++|++|+||||.+... ...+ ++.+.++|++|.+ .|..++|+|+.++..+...+... +. ...+.++|.....
T Consensus 127 ~~~~i~~D~D~TL~~~~~-~v~irdp~V~EtL~eLke-kGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i~~k 203 (303)
T PHA03398 127 IPHVIVFDLDSTLITDEE-PVRIRDPFVYDSLDELKE-RGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRKAGE 203 (303)
T ss_pred eccEEEEecCCCccCCCC-ccccCChhHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCcccc
Confidence 468999999999998531 1112 5899999999996 68999999988888777777643 22 2355556665544
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0039 Score=58.71 Aligned_cols=55 Identities=15% Similarity=0.181 Sum_probs=42.2
Q ss_pred eeEEecCCCcCCCCC--CCCC-------CCCHHHHHHHHHHHhcCCCeEEEEcCC-ChhhHHhhcc
Q 004314 592 RAILFDYDGTVMPQT--SINK-------APSQAVISIINTLCNDARNTVFVVSGR-GRDCLGKWFS 647 (761)
Q Consensus 592 rlI~lDyDGTL~~~~--~~~~-------~p~~~~~~~L~~L~~d~~n~V~IvSGR-~~~~L~~~f~ 647 (761)
|+|++|+||||++.. .... .+.+.+.++|+.|.+ .+..++|+|++ ........+.
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~-~g~~l~i~Sn~~~~~~~~~~l~ 65 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKK-NGFLLALASYNDDPHVAYELLK 65 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHH-CCeEEEEEeCCCCHHHHHHHHH
Confidence 689999999999862 1121 246799999999986 58999999999 6766655554
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.0031 Score=59.24 Aligned_cols=57 Identities=16% Similarity=0.266 Sum_probs=44.5
Q ss_pred eeEEecCCCcCCCCCC-----CCCCCCHHHHHHHHHHHhcCCCeEEEEcCCC--------hhhHHhhccCC
Q 004314 592 RAILFDYDGTVMPQTS-----INKAPSQAVISIINTLCNDARNTVFVVSGRG--------RDCLGKWFSPC 649 (761)
Q Consensus 592 rlI~lDyDGTL~~~~~-----~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~--------~~~L~~~f~~~ 649 (761)
|+|++|+||||++... ....+.+.+.++|+.|.+ .+..++|+|+++ .+.+.+.+..+
T Consensus 1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~-~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~ 70 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKE-AGYKVVIVTNQSGIGRGKFSSGRVARRLEEL 70 (132)
T ss_pred CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHH-CCCEEEEEECCccccccHHHHHHHHHHHHHC
Confidence 6899999999995211 124567899999999985 589999999999 67777777643
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.0021 Score=68.09 Aligned_cols=50 Identities=14% Similarity=0.210 Sum_probs=39.9
Q ss_pred eeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhH
Q 004314 592 RAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCL 642 (761)
Q Consensus 592 rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L 642 (761)
|+|++|+||||.........+.+...++|++|.+ .+..|+++|||+....
T Consensus 2 k~i~~D~DGtl~~~~~~~~~~~~~a~~al~~l~~-~G~~~~~~Tn~~~~~~ 51 (257)
T TIGR01458 2 KGVLLDISGVLYISDAKSGVAVPGSQEAVKRLRG-ASVKVRFVTNTTKESK 51 (257)
T ss_pred CEEEEeCCCeEEeCCCcccCcCCCHHHHHHHHHH-CCCeEEEEECCCCCCH
Confidence 6899999999997431112367799999999996 5999999999887753
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.0021 Score=67.74 Aligned_cols=54 Identities=7% Similarity=0.165 Sum_probs=44.1
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~ 649 (761)
.+++++|+||||... ..+.+...+.|++|.+ .+..++++|||+......+...+
T Consensus 1 ~~~v~~DlDGtL~~~----~~~~p~a~~~l~~L~~-~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 1 IKNVICDIDGVLMHD----NVAVPGAAEFLHRILD-KGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CcEEEEeCCCceEeC----CeeCccHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHH
Confidence 378999999999973 2577899999999996 58999999999987666655443
|
|
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.37 Score=53.70 Aligned_cols=250 Identities=19% Similarity=0.220 Sum_probs=128.6
Q ss_pred CCCCCEEEEeCCcc--chHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHHH
Q 004314 198 NPEDDYVWIHDYHL--MVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCC 275 (761)
Q Consensus 198 ~~~~DiVwvhDyhl--~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~ 275 (761)
+| |+|..=||.- +.+...+|++.+..|+.++. ++.+|.==++|-..++.....=++.| .+-..|..
T Consensus 82 ~p--d~vIlID~pgFNlrlak~lk~~~~~~~viyYI-----~PqvWAWr~~R~~~i~~~~D~ll~if---PFE~~~y~-- 149 (373)
T PF02684_consen 82 KP--DVVILIDYPGFNLRLAKKLKKRGIPIKVIYYI-----SPQVWAWRPGRAKKIKKYVDHLLVIF---PFEPEFYK-- 149 (373)
T ss_pred CC--CEEEEeCCCCccHHHHHHHHHhCCCceEEEEE-----CCceeeeCccHHHHHHHHHhheeECC---cccHHHHh--
Confidence 55 8888889873 36788999998888887753 23444333455555554322211222 11122221
Q ss_pred hhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc--CCCeEEEe--ecCccc-cCC
Q 004314 276 SRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF--EGKTVLLG--VDDMDI-FKG 350 (761)
Q Consensus 276 ~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~--~~~~vil~--VdRld~-~KG 350 (761)
+.| +-..|-|+. =+|.-... .. ....++.+ +++++|.- =+|-.. .+.
T Consensus 150 ----------~~g-~~~~~VGHP--------l~d~~~~~-----~~----~~~~~~~~l~~~~~iIaLLPGSR~~EI~rl 201 (373)
T PF02684_consen 150 ----------KHG-VPVTYVGHP--------LLDEVKPE-----PD----RAEAREKLLDPDKPIIALLPGSRKSEIKRL 201 (373)
T ss_pred ----------ccC-CCeEEECCc--------chhhhccC-----CC----HHHHHHhcCCCCCcEEEEeCCCCHHHHHHH
Confidence 111 113344442 12211110 11 11222222 34443332 266654 445
Q ss_pred hHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHH
Q 004314 351 VDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYY 430 (761)
Q Consensus 351 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly 430 (761)
++..++|.+++.+++|+++ ++....+. . ..+.+.+.....+. +. ++..+ ..+....+
T Consensus 202 lP~~l~aa~~l~~~~p~l~----fvvp~a~~-----~---~~~~i~~~~~~~~~-----~~-~~~~~-----~~~~~~~m 258 (373)
T PF02684_consen 202 LPIFLEAAKLLKKQRPDLQ----FVVPVAPE-----V---HEELIEEILAEYPP-----DV-SIVII-----EGESYDAM 258 (373)
T ss_pred HHHHHHHHHHHHHhCCCeE----EEEecCCH-----H---HHHHHHHHHHhhCC-----CC-eEEEc-----CCchHHHH
Confidence 5888999999999999976 55443321 1 11223333322221 11 23322 34677789
Q ss_pred HhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcccccCc-----EEECCCCHHHHHHH
Q 004314 431 TIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLSGA-----IRVNPWNIEATAEA 505 (761)
Q Consensus 431 ~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~a-----l~VnP~d~~~~A~a 505 (761)
+.||+.+++| |.+.+|++..|.+....=+...+.---...+|-..+.|....+-|. ++-+--+++.++++
T Consensus 259 ~~ad~al~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~ 333 (373)
T PF02684_consen 259 AAADAALAAS-----GTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAE 333 (373)
T ss_pred HhCcchhhcC-----CHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHH
Confidence 9999999998 7899999998763100000000000000011223455555444321 34456689999999
Q ss_pred HHHHHcCCHH
Q 004314 506 MHEAIQMNEA 515 (761)
Q Consensus 506 i~~aL~m~~~ 515 (761)
+...|..++.
T Consensus 334 ~~~ll~~~~~ 343 (373)
T PF02684_consen 334 LLELLENPEK 343 (373)
T ss_pred HHHHhcCHHH
Confidence 9999987653
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.0025 Score=68.26 Aligned_cols=50 Identities=14% Similarity=0.335 Sum_probs=38.9
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhh
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKW 645 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~ 645 (761)
.++|++|+||||... ..+-+.+.++|++|.+ .+..|+++|||+.....++
T Consensus 2 ~~~~~~D~DGtl~~~----~~~~~ga~e~l~~L~~-~g~~~~~~Tnns~~~~~~~ 51 (279)
T TIGR01452 2 AQGFIFDCDGVLWLG----ERVVPGAPELLDRLAR-AGKAALFVTNNSTKSRAEY 51 (279)
T ss_pred ccEEEEeCCCceEcC----CeeCcCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHH
Confidence 478999999999873 2345569999999996 5899999999875544443
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.0045 Score=67.38 Aligned_cols=53 Identities=13% Similarity=0.258 Sum_probs=42.5
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhcc
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~ 647 (761)
+.++|+||+||||... + .+-+...+.|++|.+ .+..++++|+|+.......+.
T Consensus 27 ~~~~~~~D~DGtl~~~---~-~~~~ga~e~l~~lr~-~g~~~~~~TN~~~~~~~~~~~ 79 (311)
T PLN02645 27 SVETFIFDCDGVIWKG---D-KLIEGVPETLDMLRS-MGKKLVFVTNNSTKSRAQYGK 79 (311)
T ss_pred hCCEEEEeCcCCeEeC---C-ccCcCHHHHHHHHHH-CCCEEEEEeCCCCCCHHHHHH
Confidence 4789999999999973 2 345778999999996 589999999999666555554
|
|
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.021 Score=59.93 Aligned_cols=85 Identities=26% Similarity=0.509 Sum_probs=59.3
Q ss_pred HHHHHHHHHhCC---CCCEEEEeCCccchHHHHHHHhcC------CCeEEEEEecC-----CCchhHHh--cCcch----
Q 004314 188 IFSQRVIEVINP---EDDYVWIHDYHLMVLPTFLRRRFT------RLRMGFFLHSP-----FPSSEIYR--TLPVR---- 247 (761)
Q Consensus 188 ~fa~~i~~~~~~---~~DiVwvhDyhl~llp~~lr~~~~------~~~ig~flH~P-----fP~~e~fr--~lp~r---- 247 (761)
.|+.++++.++. .-||||+||+|..++|.+||.... ++++.|++|.. ||. +.+. .+|+.
T Consensus 118 ~fs~a~le~~~~l~~~pDIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~-~~~~~~gl~~~~~~~ 196 (245)
T PF08323_consen 118 FFSRAALELLKKLGWKPDIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPP-EDLKALGLPDEYFQN 196 (245)
T ss_dssp HHHHHHHHHHCTCT-S-SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEG-GGGGCTT-GGGGS-S
T ss_pred HHHHHHHHHHHhhCCCCCEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCH-HHHHHcCCCHHHhcc
Confidence 566666666542 349999999999999999998753 59999999964 332 2221 13321
Q ss_pred ----------HHHHHHhhhcCEEeeeCHHHHHHHHH
Q 004314 248 ----------EEILKALLNADLIGFHTFDYARHFLS 273 (761)
Q Consensus 248 ----------~~il~~ll~~DligF~t~~~~~~Fl~ 273 (761)
.-+-.|+..||.|..-++.|++.-++
T Consensus 197 ~~~~~~~~~in~lk~gi~~AD~v~TVS~~Ya~Ei~~ 232 (245)
T PF08323_consen 197 LDEYEFYGQINFLKAGIVYADKVTTVSPTYAREIQT 232 (245)
T ss_dssp TTTTEETTEEEHHHHHHHHSSEEEESSHHHHHHTTS
T ss_pred ccccccccccCHHHHHHHhcCEeeeCCHHHHHHHhC
Confidence 13446689999999999999987654
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.0019 Score=62.81 Aligned_cols=58 Identities=16% Similarity=0.144 Sum_probs=40.5
Q ss_pred ceeEEecCCCcCCCCCC----CCCCCCHH-HH--HHHHHHHhcCCCeEEEEcCCChhhHHhhccCC
Q 004314 591 SRAILFDYDGTVMPQTS----INKAPSQA-VI--SIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~----~~~~p~~~-~~--~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~ 649 (761)
.|++++|+||||+.... ....+..- +. .+|++|.+ .+..++|+||++...+.+.+..+
T Consensus 1 ~~~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~~~~~i~~Lk~-~G~~i~IvTn~~~~~~~~~l~~~ 65 (154)
T TIGR01670 1 IRLLILDVDGVLTDGKIYYTNNGEEIKAFNVRDGYGIRCALK-SGIEVAIITGRKAKLVEDRCKTL 65 (154)
T ss_pred CeEEEEeCceeEEcCeEEECCCCcEEEEEechhHHHHHHHHH-CCCEEEEEECCCCHHHHHHHHHc
Confidence 37999999999997321 11111110 10 27888885 58999999999999888888654
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.0061 Score=64.18 Aligned_cols=52 Identities=15% Similarity=0.289 Sum_probs=42.1
Q ss_pred eeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcC---CChhhHHhhccC
Q 004314 592 RAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSG---RGRDCLGKWFSP 648 (761)
Q Consensus 592 rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSG---R~~~~L~~~f~~ 648 (761)
|+|++|+||||.... . +-++..++|++|.+ .+..|+++|| |+...+.+.+..
T Consensus 2 ~~~~~D~DGtl~~~~---~-~i~~a~~~l~~l~~-~g~~~~~~Tnn~~r~~~~~~~~l~~ 56 (249)
T TIGR01457 2 KGYLIDLDGTMYKGK---E-RIPEAETFVHELQK-RDIPYLFVTNNSTRTPESVAEMLAS 56 (249)
T ss_pred CEEEEeCCCceEcCC---e-eCcCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHH
Confidence 689999999999742 2 33478999999996 5899999985 888888877764
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.012 Score=61.53 Aligned_cols=63 Identities=24% Similarity=0.367 Sum_probs=47.1
Q ss_pred cccCCHHHHHHHHHhccceeEEecCCCcCCCCCC---CC-C---------------------------CCCHHHHHHHHH
Q 004314 574 FRKLSIDAIVSAYLRSKSRAILFDYDGTVMPQTS---IN-K---------------------------APSQAVISIINT 622 (761)
Q Consensus 574 f~~l~~~~i~~~y~~s~~rlI~lDyDGTL~~~~~---~~-~---------------------------~p~~~~~~~L~~ 622 (761)
..=.++++|.+.....+.-.|+||+||||+...+ .. . .|-+...++|+.
T Consensus 46 ~~~~~~~~~~~~~~~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~ 125 (237)
T TIGR01672 46 IHWISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDM 125 (237)
T ss_pred eeEEEHHHHHHhcCCCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHH
Confidence 3346889999887776666999999999997554 11 1 122227888999
Q ss_pred HHhcCCCeEEEEcCC
Q 004314 623 LCNDARNTVFVVSGR 637 (761)
Q Consensus 623 L~~d~~n~V~IvSGR 637 (761)
|.+ .|..++|||+|
T Consensus 126 l~~-~G~~i~iVTnr 139 (237)
T TIGR01672 126 HQR-RGDAIFFVTGR 139 (237)
T ss_pred HHH-CCCEEEEEeCC
Confidence 886 58999999999
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.03 E-value=1 Score=49.82 Aligned_cols=273 Identities=15% Similarity=0.144 Sum_probs=142.4
Q ss_pred HhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCcc--chHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHh
Q 004314 177 SLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHL--MVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKAL 254 (761)
Q Consensus 177 ~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl--~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~l 254 (761)
..|..|.+.= +.+.+. +| |++..=|+-= ..+...+|+..|++|+.++. ++.+|.--|.|-..+..
T Consensus 69 ~llk~~~~~~----~~i~~~-kp--D~~i~IDsPdFnl~vak~lrk~~p~i~iihYV-----~PsVWAWr~~Ra~~i~~- 135 (381)
T COG0763 69 RLLKIRRELV----RYILAN-KP--DVLILIDSPDFNLRVAKKLRKAGPKIKIIHYV-----SPSVWAWRPKRAVKIAK- 135 (381)
T ss_pred HHHHHHHHHH----HHHHhc-CC--CEEEEeCCCCCchHHHHHHHHhCCCCCeEEEE-----CcceeeechhhHHHHHH-
Confidence 4566666433 333332 45 7888877762 36778999999999998753 23333222333222222
Q ss_pred hhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc-
Q 004314 255 LNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF- 333 (761)
Q Consensus 255 l~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~- 333 (761)
.+|++.--.+.... |.+ + .|.. ..|-|++ =.|.-.+.+. ....|+++
T Consensus 136 -~~D~lLailPFE~~-~y~---k-~g~~---------~~yVGHp--------l~d~i~~~~~---------r~~ar~~l~ 183 (381)
T COG0763 136 -YVDHLLAILPFEPA-FYD---K-FGLP---------CTYVGHP--------LADEIPLLPD---------REAAREKLG 183 (381)
T ss_pred -HhhHeeeecCCCHH-HHH---h-cCCC---------eEEeCCh--------hhhhcccccc---------HHHHHHHhC
Confidence 34554322221111 221 1 1211 2233432 1222222211 12245555
Q ss_pred ---CCCeEEEeec-C-ccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCC
Q 004314 334 ---EGKTVLLGVD-D-MDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGR 408 (761)
Q Consensus 334 ---~~~~vil~Vd-R-ld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~ 408 (761)
..+.+.+-.| | =+...-.+..++|+++|.+++|+++ ++.=..+ ..++.++.+ ..+.-.
T Consensus 184 ~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~----~vlp~~~-----~~~~~~~~~---~~~~~~----- 246 (381)
T COG0763 184 IDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLK----FVLPLVN-----AKYRRIIEE---ALKWEV----- 246 (381)
T ss_pred CCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCce----EEEecCc-----HHHHHHHHH---Hhhccc-----
Confidence 3445544443 3 4556677888999999999999987 4432221 233333222 221111
Q ss_pred CCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEc---------
Q 004314 409 PGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVS--------- 479 (761)
Q Consensus 409 ~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~S--------- 479 (761)
..+..+ +...+....+.+||+.+..| |.+.+|++.|+.+ +||.-
T Consensus 247 --~~~~~~----~~~~~~~~a~~~aD~al~aS-----GT~tLE~aL~g~P----------------~Vv~Yk~~~it~~i 299 (381)
T COG0763 247 --AGLSLI----LIDGEKRKAFAAADAALAAS-----GTATLEAALAGTP----------------MVVAYKVKPITYFI 299 (381)
T ss_pred --cCceEE----ecCchHHHHHHHhhHHHHhc-----cHHHHHHHHhCCC----------------EEEEEeccHHHHHH
Confidence 001111 23457888999999999998 7899999999862 22222
Q ss_pred -------CCCCCcccccCcEEE-----CCCCHHHHHHHHHHHHcCCH--HHHHHHHHHHhhHHhhCCHHHHHH
Q 004314 480 -------EFIGCSPSLSGAIRV-----NPWNIEATAEAMHEAIQMNE--AEKQLRHEKHYRYVSTHDVAYWAR 538 (761)
Q Consensus 480 -------e~~G~~~~l~~al~V-----nP~d~~~~A~ai~~aL~m~~--~er~~r~~~~~~~v~~~~~~~Wa~ 538 (761)
.+++....+-|-.+| .--.++.+|+++...+..+. ++.++....+++++.+..+..=+.
T Consensus 300 ak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~~~~~~e~aA 372 (381)
T COG0763 300 AKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLARALEELLLNGDRREALKEKFRELHQYLREDPASEIAA 372 (381)
T ss_pred HHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHcCCcHHHHHH
Confidence 233333333221212 11347899999999998762 233344555666666653444333
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.01 Score=58.58 Aligned_cols=49 Identities=16% Similarity=0.254 Sum_probs=36.7
Q ss_pred cceeEEecCCCcCCCCCCCCCC---------CCHHHHHHHHHHHhcCCCeEEEEcCCCh
Q 004314 590 KSRAILFDYDGTVMPQTSINKA---------PSQAVISIINTLCNDARNTVFVVSGRGR 639 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~---------p~~~~~~~L~~L~~d~~n~V~IvSGR~~ 639 (761)
+.|++++|+||||+...+.... +-+.+.++|++|.+ .+..++|+|..+.
T Consensus 12 ~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~-~G~~l~I~TN~~~ 69 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDD-EGYKIVIFTNQSG 69 (166)
T ss_pred cCcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHH-CCCEEEEEeCCcc
Confidence 4689999999999974321111 34779999999985 5899999996554
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.005 Score=61.70 Aligned_cols=59 Identities=15% Similarity=0.133 Sum_probs=41.8
Q ss_pred cceeEEecCCCcCCCCC----CCCCCCCHHH---HHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC
Q 004314 590 KSRAILFDYDGTVMPQT----SINKAPSQAV---ISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~----~~~~~p~~~~---~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~ 649 (761)
..|+|++|+||||+... .......... ...++.|.+ .+..++|+|||+...+.+.+..+
T Consensus 20 ~ikli~~D~Dgtl~~~~i~~~~~~~~~~~~~~~d~~~i~~L~~-~Gi~v~I~T~~~~~~v~~~l~~l 85 (183)
T PRK09484 20 NIRLLICDVDGVFSDGLIYMGNNGEELKAFNVRDGYGIRCLLT-SGIEVAIITGRKSKLVEDRMTTL 85 (183)
T ss_pred CceEEEEcCCeeeecCEEEEcCCCCEEEEEeccchHHHHHHHH-CCCEEEEEeCCCcHHHHHHHHHc
Confidence 58999999999999741 1111111222 256677775 68999999999999988887654
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.063 Score=52.20 Aligned_cols=61 Identities=18% Similarity=0.222 Sum_probs=52.7
Q ss_pred HHhccceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC
Q 004314 586 YLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (761)
Q Consensus 586 y~~s~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~ 649 (761)
.++...|-|++|+|.||++.. +...++|+++-+..+.. .+..|+|+|-.....+..|...+
T Consensus 23 L~~~Gikgvi~DlDNTLv~wd--~~~~tpe~~~W~~e~k~-~gi~v~vvSNn~e~RV~~~~~~l 83 (175)
T COG2179 23 LKAHGIKGVILDLDNTLVPWD--NPDATPELRAWLAELKE-AGIKVVVVSNNKESRVARAAEKL 83 (175)
T ss_pred HHHcCCcEEEEeccCceeccc--CCCCCHHHHHHHHHHHh-cCCEEEEEeCCCHHHHHhhhhhc
Confidence 345678999999999999975 55678999999999996 69999999999999999888754
|
|
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.67 Score=50.16 Aligned_cols=168 Identities=17% Similarity=0.174 Sum_probs=110.4
Q ss_pred CCeEEEeecCccccCChHHHHHHHHHHHHhCC-CCc--CceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCC
Q 004314 335 GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHP-KWQ--GRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGY 411 (761)
Q Consensus 335 ~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P-~~~--~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~ 411 (761)
...++++--...+...+.-+|.|++..-++.- +-. -++ |.+|+ |.||..+.+.++|++. .|
T Consensus 254 ~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~l-lciIT----GKGPlkE~Y~~~I~~~-----------~~ 317 (444)
T KOG2941|consen 254 RPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSL-LCIIT----GKGPLKEKYSQEIHEK-----------NL 317 (444)
T ss_pred CCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcE-EEEEc----CCCchhHHHHHHHHHh-----------cc
Confidence 45688888889999999999999885422210 000 122 44454 3678777777776654 47
Q ss_pred ccEEEEcCCCCHHHHHHHHHhcccce--ecccccCCCc--chhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccc
Q 004314 412 EPVVFIDKPVTLSERAAYYTIAECVV--VTAVRDGMNL--TPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPS 487 (761)
Q Consensus 412 ~pV~~~~~~v~~~el~aly~~ADv~v--vtS~~EGmnL--v~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~ 487 (761)
+.|.+.+--++-++.+.++..||..| -||. -|.-| -+...--|+. |+++-.|.-..|.
T Consensus 318 ~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSS-SGLDLPMKVVDMFGcgl-----------------PvcA~~fkcl~EL 379 (444)
T KOG2941|consen 318 QHVQVCTPWLEAEDYPKLLASADLGVCLHTSS-SGLDLPMKVVDMFGCGL-----------------PVCAVNFKCLDEL 379 (444)
T ss_pred cceeeeecccccccchhHhhccccceEeeecC-cccCcchhHHHhhcCCC-----------------ceeeecchhHHHH
Confidence 78888887788999999999999654 4554 34443 3445555654 6776677655555
Q ss_pred cc---CcEEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHhhHHhhCCHHHHHHHHHH
Q 004314 488 LS---GAIRVNPWNIEATAEAMHEAIQM---NEAEKQLRHEKHYRYVSTHDVAYWARSFFQ 542 (761)
Q Consensus 488 l~---~al~VnP~d~~~~A~ai~~aL~m---~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~ 542 (761)
+. +|++++ |.+++|+.|..+++. +..+.. +.++-+++..-.+|..+--+
T Consensus 380 Vkh~eNGlvF~--Ds~eLa~ql~~lf~~fp~~a~~l~----~lkkn~~e~~e~RW~~~W~~ 434 (444)
T KOG2941|consen 380 VKHGENGLVFE--DSEELAEQLQMLFKNFPDNADELN----QLKKNLREEQELRWDESWER 434 (444)
T ss_pred HhcCCCceEec--cHHHHHHHHHHHHhcCCCCHHHHH----HHHHhhHHHHhhhHHHHHHH
Confidence 52 599998 899999999999872 222222 33444445555777765443
|
|
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=95.13 E-value=0.068 Score=51.39 Aligned_cols=98 Identities=18% Similarity=0.277 Sum_probs=49.8
Q ss_pred HHHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcc-----hHHHHHH-hhhcCEEeeeCH
Q 004314 192 RVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPV-----REEILKA-LLNADLIGFHTF 265 (761)
Q Consensus 192 ~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~-----r~~il~~-ll~~DligF~t~ 265 (761)
++++..++ |+|++|.++...+...... ++++.+++|.+++.........+ ...+.+. ...+|.+..-+.
T Consensus 74 ~~i~~~~~--DiVh~~~~~~~~~~~~~~~---~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS~ 148 (177)
T PF13439_consen 74 RLIKKEKP--DIVHIHGPPAFWIALLACR---KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAVSE 148 (177)
T ss_dssp HHHHHHT---SEEECCTTHCCCHHHHHHH---CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESSH
T ss_pred HHHHHcCC--CeEEecccchhHHHHHhcc---CCCEEEEeCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEECH
Confidence 34444465 8999999887765433322 88999999998742111111111 1111222 246788877777
Q ss_pred HHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccch
Q 004314 266 DYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIE 314 (761)
Q Consensus 266 ~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~ 314 (761)
.-++.+.+ .|. ...++.++|+|||++.|+
T Consensus 149 ~~~~~l~~-----~~~---------------~~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 149 STKDELIK-----FGI---------------PPEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp HHHHHHHH-----HT-----------------SS-EEE----B-CCCH-
T ss_pred HHHHHHHH-----hCC---------------cccCCEEEECCccHHHcC
Confidence 66555543 232 123788999999999884
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=94.31 E-value=0.012 Score=52.99 Aligned_cols=49 Identities=16% Similarity=0.368 Sum_probs=36.1
Q ss_pred EEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhcc
Q 004314 594 ILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (761)
Q Consensus 594 I~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~ 647 (761)
|++|+||||.. ...|-+...+.|++|.+ .+..++++|-.+...-+++..
T Consensus 1 ~l~D~dGvl~~----g~~~ipga~e~l~~L~~-~g~~~~~lTNns~~s~~~~~~ 49 (101)
T PF13344_consen 1 FLFDLDGVLYN----GNEPIPGAVEALDALRE-RGKPVVFLTNNSSRSREEYAK 49 (101)
T ss_dssp EEEESTTTSEE----TTEE-TTHHHHHHHHHH-TTSEEEEEES-SSS-HHHHHH
T ss_pred CEEeCccEeEe----CCCcCcCHHHHHHHHHH-cCCCEEEEeCCCCCCHHHHHH
Confidence 68999999997 34466789999999996 588999998777555444443
|
... |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=94.20 E-value=0.048 Score=52.47 Aligned_cols=47 Identities=26% Similarity=0.299 Sum_probs=37.1
Q ss_pred eeEEecCCCcCCCCCCCC-------CCCCHHHHHHHHHHHhcCCCeEEEEcCCCh
Q 004314 592 RAILFDYDGTVMPQTSIN-------KAPSQAVISIINTLCNDARNTVFVVSGRGR 639 (761)
Q Consensus 592 rlI~lDyDGTL~~~~~~~-------~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~ 639 (761)
+++++|.||||+...+.. ..+.+.+.++|+.|.+ .+..++|+|+.+.
T Consensus 1 ~~~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~Lk~-~g~~~~I~Sn~~~ 54 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTLRA-AGYTVVVVTNQSG 54 (147)
T ss_pred CeEEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHHHH-CCCEEEEEeCCCc
Confidence 478999999999865411 2356789999999996 5899999998763
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=94.03 E-value=0.81 Score=51.64 Aligned_cols=138 Identities=16% Similarity=0.135 Sum_probs=80.2
Q ss_pred eEEEeecC-ccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhc---------cc
Q 004314 337 TVLLGVDD-MDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINE---------TF 406 (761)
Q Consensus 337 ~vil~VdR-ld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~---------~~ 406 (761)
.++++-.| -+..++++..++|++++.++ |+++ ++....+. .+++.+++.+.+. .++. .|
T Consensus 208 lllLpGSR~ae~~~~lp~~l~al~~L~~~-~~~~----~v~~~~~~----~~~~~~~~~l~~~--g~~~~~~~~~~~~~~ 276 (396)
T TIGR03492 208 IALLPGSRPPEAYRNLKLLLRALEALPDS-QPFV----FLAAIVPS----LSLEKLQAILEDL--GWQLEGSSEDQTSLF 276 (396)
T ss_pred EEEECCCCHHHHHccHHHHHHHHHHHhhC-CCeE----EEEEeCCC----CCHHHHHHHHHhc--CceecCCccccchhh
Confidence 34556677 45567888999999998655 5443 54443222 2333443333211 1100 00
Q ss_pred CCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCC--
Q 004314 407 GRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGC-- 484 (761)
Q Consensus 407 g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~-- 484 (761)
- ..++.++. ...+..++|++||++|..| |-+..|+++++. |.|+--+.+.
T Consensus 277 ~---~~~~~v~~---~~~~~~~~l~~ADlvI~rS-----Gt~T~E~a~lg~-----------------P~Ilip~~~~q~ 328 (396)
T TIGR03492 277 Q---KGTLEVLL---GRGAFAEILHWADLGIAMA-----GTATEQAVGLGK-----------------PVIQLPGKGPQF 328 (396)
T ss_pred c---cCceEEEe---chHhHHHHHHhCCEEEECc-----CHHHHHHHHhCC-----------------CEEEEeCCCCHH
Confidence 0 01133222 2467899999999999885 356699999976 4444332121
Q ss_pred -c---cc---c-cCcEEECCCCHHHHHHHHHHHHcCC
Q 004314 485 -S---PS---L-SGAIRVNPWNIEATAEAMHEAIQMN 513 (761)
Q Consensus 485 -~---~~---l-~~al~VnP~d~~~~A~ai~~aL~m~ 513 (761)
+ +. + .+++.+...+++.+++++.++|+++
T Consensus 329 na~~~~~~~~l~g~~~~l~~~~~~~l~~~l~~ll~d~ 365 (396)
T TIGR03492 329 TYGFAEAQSRLLGGSVFLASKNPEQAAQVVRQLLADP 365 (396)
T ss_pred HHHHHHhhHhhcCCEEecCCCCHHHHHHHHHHHHcCH
Confidence 0 11 1 3456666678899999999999854
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=94.00 E-value=0.14 Score=50.63 Aligned_cols=56 Identities=16% Similarity=0.171 Sum_probs=43.8
Q ss_pred ccceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCC-hhhHHhhcc
Q 004314 589 SKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRG-RDCLGKWFS 647 (761)
Q Consensus 589 s~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~-~~~L~~~f~ 647 (761)
...+++++|+||||+... ...+.+.+.+.|++|.+ .+..++|+|+.+ ...+..++.
T Consensus 23 ~~v~~vv~D~Dgtl~~~~--~~~~~pgv~e~L~~Lk~-~g~~l~I~Sn~~~~~~~~~~~~ 79 (170)
T TIGR01668 23 VGIKGVVLDKDNTLVYPD--HNEAYPALRDWIEELKA-AGRKLLIVSNNAGEQRAKAVEK 79 (170)
T ss_pred CCCCEEEEecCCccccCC--CCCcChhHHHHHHHHHH-cCCEEEEEeCCchHHHHHHHHH
Confidence 467999999999999753 23566789999999986 578999999998 455554443
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=93.95 E-value=0.13 Score=53.74 Aligned_cols=62 Identities=19% Similarity=0.303 Sum_probs=46.3
Q ss_pred cCCHHHHHHHHHhccceeEEecCCCcCCCCCCC-------------------------------CCCCCHHHHHHHHHHH
Q 004314 576 KLSIDAIVSAYLRSKSRAILFDYDGTVMPQTSI-------------------------------NKAPSQAVISIINTLC 624 (761)
Q Consensus 576 ~l~~~~i~~~y~~s~~rlI~lDyDGTL~~~~~~-------------------------------~~~p~~~~~~~L~~L~ 624 (761)
=.++++|.+.-...+...|.+|+|||++..++. ...|-+.++++|+.|.
T Consensus 48 ~~~~~~~~~~~~~~~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~ 127 (237)
T PRK11009 48 WVSVAQIEKSLEGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHV 127 (237)
T ss_pred EEEHHHhhhhccCCCCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHH
Confidence 367888888765555559999999999952210 1224456899999998
Q ss_pred hcCCCeEEEEcCCC
Q 004314 625 NDARNTVFVVSGRG 638 (761)
Q Consensus 625 ~d~~n~V~IvSGR~ 638 (761)
+ .+..++++|||.
T Consensus 128 ~-~G~~I~iVTnR~ 140 (237)
T PRK11009 128 K-RGDSIYFITGRT 140 (237)
T ss_pred H-CCCeEEEEeCCC
Confidence 5 599999999996
|
|
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=93.93 E-value=0.06 Score=52.73 Aligned_cols=43 Identities=23% Similarity=0.342 Sum_probs=31.1
Q ss_pred eeEEecCCCcCCCCCCCCC---------CCCHHHHHHHHHHHhcCCCeEEEEc
Q 004314 592 RAILFDYDGTVMPQTSINK---------APSQAVISIINTLCNDARNTVFVVS 635 (761)
Q Consensus 592 rlI~lDyDGTL~~~~~~~~---------~p~~~~~~~L~~L~~d~~n~V~IvS 635 (761)
|+.++|+||||....+... ...+.+.+.|++|.+ .+..++|+|
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l~~-~Gy~IvIvT 52 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALRELHK-KGYKIVIVT 52 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHHHH-TTEEEEEEE
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHHHh-cCCeEEEEe
Confidence 5789999999987543222 123579999999986 589999998
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=93.88 E-value=13 Score=41.23 Aligned_cols=256 Identities=16% Similarity=0.078 Sum_probs=128.3
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhh--hcCEEee
Q 004314 185 ANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALL--NADLIGF 262 (761)
Q Consensus 185 vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll--~~DligF 262 (761)
+=..|++.+.+ .+| |+|.||.=-.-.+..-+-....++||++. |-=-=+.|. ..|.-+|+.|.+. -||+---
T Consensus 55 ~~~~~~~~~~~-~~P--d~Vlv~GD~~~~la~alaA~~~~ipv~Hi-eaGlRs~d~--~~g~~de~~R~~i~~la~lhf~ 128 (346)
T PF02350_consen 55 AIIELADVLER-EKP--DAVLVLGDRNEALAAALAAFYLNIPVAHI-EAGLRSGDR--TEGMPDEINRHAIDKLAHLHFA 128 (346)
T ss_dssp HHHHHHHHHHH-HT---SEEEEETTSHHHHHHHHHHHHTT-EEEEE-S-----S-T--TSSTTHHHHHHHHHHH-SEEEE
T ss_pred HHHHHHHHHHh-cCC--CEEEEEcCCchHHHHHHHHHHhCCCEEEe-cCCCCcccc--CCCCchhhhhhhhhhhhhhhcc
Confidence 33445444444 477 89999976666555555555678887753 211000111 1234455555542 3677767
Q ss_pred eCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEee
Q 004314 263 HTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGV 342 (761)
Q Consensus 263 ~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~V 342 (761)
-|..+.++.++ .|.+. ++ +.. +-.+++|.-........+.. ....+.....++.+++..
T Consensus 129 ~t~~~~~~L~~-----~G~~~--~r----I~~--------vG~~~~D~l~~~~~~~~~~~--~~~~i~~~~~~~~iLvt~ 187 (346)
T PF02350_consen 129 PTEEARERLLQ-----EGEPP--ER----IFV--------VGNPGIDALLQNKEEIEEKY--KNSGILQDAPKPYILVTL 187 (346)
T ss_dssp SSHHHHHHHHH-----TT--G--GG----EEE-----------HHHHHHHHHHHTTCC-H--HHHHHHHCTTSEEEEEE-
T ss_pred CCHHHHHHHHh-----cCCCC--Ce----EEE--------EChHHHHHHHHhHHHHhhhh--hhHHHHhccCCCEEEEEe
Confidence 77887777664 34321 11 111 22456665322211111000 011222223445555555
Q ss_pred cCcccc---CChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcC
Q 004314 343 DDMDIF---KGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDK 419 (761)
Q Consensus 343 dRld~~---KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~ 419 (761)
=|.... ......+.+++.|.+. +++. +|....++ ....+.+.+...++ ..|.++ .
T Consensus 188 H~~t~~~~~~~~~~i~~~l~~L~~~-~~~~----vi~~~hn~-------p~~~~~i~~~l~~~---------~~v~~~-~ 245 (346)
T PF02350_consen 188 HPVTNEDNPERLEQILEALKALAER-QNVP----VIFPLHNN-------PRGSDIIIEKLKKY---------DNVRLI-E 245 (346)
T ss_dssp S-CCCCTHH--HHHHHHHHHHHHHH-TTEE----EEEE--S--------HHHHHHHHHHHTT----------TTEEEE--
T ss_pred CcchhcCChHHHHHHHHHHHHHHhc-CCCc----EEEEecCC-------chHHHHHHHHhccc---------CCEEEE-C
Confidence 554433 3467778888888776 5543 44443221 12223333322221 146655 5
Q ss_pred CCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcccc---cCcEEECC
Q 004314 420 PVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL---SGAIRVNP 496 (761)
Q Consensus 420 ~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l---~~al~VnP 496 (761)
+++..++..+++.|+++|-.|- | +..||..++. |+|.=...|-.+.. ...++|.
T Consensus 246 ~l~~~~~l~ll~~a~~vvgdSs--G---I~eEa~~lg~-----------------P~v~iR~~geRqe~r~~~~nvlv~- 302 (346)
T PF02350_consen 246 PLGYEEYLSLLKNADLVVGDSS--G---IQEEAPSLGK-----------------PVVNIRDSGERQEGRERGSNVLVG- 302 (346)
T ss_dssp ---HHHHHHHHHHESEEEESSH--H---HHHHGGGGT-------------------EEECSSS-S-HHHHHTTSEEEET-
T ss_pred CCCHHHHHHHHhcceEEEEcCc--c---HHHHHHHhCC-----------------eEEEecCCCCCHHHHhhcceEEeC-
Confidence 8999999999999999987763 2 3449999876 55554555655554 2456666
Q ss_pred CCHHHHHHHHHHHHcC
Q 004314 497 WNIEATAEAMHEAIQM 512 (761)
Q Consensus 497 ~d~~~~A~ai~~aL~m 512 (761)
.|.+++.+||.+++..
T Consensus 303 ~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 303 TDPEAIIQAIEKALSD 318 (346)
T ss_dssp SSHHHHHHHHHHHHH-
T ss_pred CCHHHHHHHHHHHHhC
Confidence 7999999999999985
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=93.78 E-value=0.13 Score=52.24 Aligned_cols=61 Identities=21% Similarity=0.212 Sum_probs=46.9
Q ss_pred CHHHHHHHHHhccceeEEecCCCcCCCCCC---CC---------CCCCHHHHHHHHHHHhcCCCeEEEEcCCCh
Q 004314 578 SIDAIVSAYLRSKSRAILFDYDGTVMPQTS---IN---------KAPSQAVISIINTLCNDARNTVFVVSGRGR 639 (761)
Q Consensus 578 ~~~~i~~~y~~s~~rlI~lDyDGTL~~~~~---~~---------~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~ 639 (761)
..+.++..+++...|+|++|+|-||++..+ .+ ...+++++..+++|.+ .+..|+|||=-+.
T Consensus 30 ~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~-~~I~v~VVTfSd~ 102 (219)
T PTZ00445 30 SADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKN-SNIKISVVTFSDK 102 (219)
T ss_pred HHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHH-CCCeEEEEEccch
Confidence 345677778889999999999999998221 11 2368999999999985 6899999985444
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=93.73 E-value=0.062 Score=53.28 Aligned_cols=50 Identities=18% Similarity=0.178 Sum_probs=39.3
Q ss_pred ccceeEEecCCCcCCCCCC----CCCCCCHHHHHHHHHHHhcCCCeEEEEcCCCh
Q 004314 589 SKSRAILFDYDGTVMPQTS----INKAPSQAVISIINTLCNDARNTVFVVSGRGR 639 (761)
Q Consensus 589 s~~rlI~lDyDGTL~~~~~----~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~ 639 (761)
+..|+|++|-||||.+... ..-.+-+.+.++|++|.+ .+..++|+|+.+.
T Consensus 2 ~~~~~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~-~G~~l~I~Tn~~~ 55 (173)
T PRK06769 2 TNIQAIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKA-NHIKIFSFTNQPG 55 (173)
T ss_pred CCCcEEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHH-CCCEEEEEECCch
Confidence 4579999999999977542 123356899999999986 5899999998763
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=93.67 E-value=0.13 Score=50.80 Aligned_cols=63 Identities=22% Similarity=0.385 Sum_probs=45.8
Q ss_pred cccccCCHHHHHHHHHhccceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCC-CeEEEEcCCC
Q 004314 572 PNFRKLSIDAIVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDAR-NTVFVVSGRG 638 (761)
Q Consensus 572 ~~f~~l~~~~i~~~y~~s~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~-n~V~IvSGR~ 638 (761)
++|..++.+.- -.++...|.|++|.|.||++. ....+++++.+.++++.+.-+ ..|+|+|-..
T Consensus 24 ~si~~I~~~~~--~Lk~~Gik~li~DkDNTL~~~--~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsa 87 (168)
T PF09419_consen 24 PSIRDIDFEAN--HLKKKGIKALIFDKDNTLTPP--YEDEIPPEYAEWLNELKKQFGKDRVLIVSNSA 87 (168)
T ss_pred CChhhCCcchh--hhhhcCceEEEEcCCCCCCCC--CcCcCCHHHHHHHHHHHHHCCCCeEEEEECCC
Confidence 34555655430 135678999999999999974 355678899999999997533 2699999863
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=93.64 E-value=0.14 Score=55.27 Aligned_cols=58 Identities=26% Similarity=0.401 Sum_probs=46.3
Q ss_pred cceeEEecCCCcCCCCCCC---------CCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 590 KSRAILFDYDGTVMPQTSI---------NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~---------~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
+.+++++|+||||...... ...+.+.+.+.|++|.+ .+..++|+|||+....+..+..
T Consensus 157 ~~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~g~~i~i~T~r~~~~~~~~l~~ 223 (300)
T PHA02530 157 LPKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKA-AGYEIIVVSGRDGVCEEDTVEW 223 (300)
T ss_pred CCCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHh-CCCEEEEEeCCChhhHHHHHHH
Confidence 4579999999999974321 34678899999999986 5899999999999877665543
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=93.47 E-value=0.064 Score=53.23 Aligned_cols=47 Identities=23% Similarity=0.293 Sum_probs=36.6
Q ss_pred eeEEecCCCcCCCCCC-----CCCCCCHHHHHHHHHHHhcCCCeEEEEcCCCh
Q 004314 592 RAILFDYDGTVMPQTS-----INKAPSQAVISIINTLCNDARNTVFVVSGRGR 639 (761)
Q Consensus 592 rlI~lDyDGTL~~~~~-----~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~ 639 (761)
|++|+|.||||+...+ .+..+-+.+.++|++|.+ .+..++|+|..+.
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~~~~~~~~~pgv~e~L~~Lk~-~G~~l~i~TN~~~ 53 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYVHEIDNFEFIDGVIDALRELKK-MGYALVLVTNQSG 53 (176)
T ss_pred CEEEEeCCCCEeCCCCCCCCHHHeEECCCHHHHHHHHHH-CCCEEEEEeCCcc
Confidence 7899999999995321 123345789999999986 5899999998763
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.34 E-value=0.077 Score=51.04 Aligned_cols=60 Identities=17% Similarity=0.191 Sum_probs=40.3
Q ss_pred hccceeEEecCCCcCCCCCC--------CCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC
Q 004314 588 RSKSRAILFDYDGTVMPQTS--------INKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (761)
Q Consensus 588 ~s~~rlI~lDyDGTL~~~~~--------~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~ 649 (761)
..+.||+++|.||||++-.- ..++....= .-++.|.+ .+.+|+|+|||.-..+++..+.+
T Consensus 5 a~~IkLli~DVDGvLTDG~ly~~~~Gee~KaFnv~DG-~Gik~l~~-~Gi~vAIITGr~s~ive~Ra~~L 72 (170)
T COG1778 5 AKNIKLLILDVDGVLTDGKLYYDENGEEIKAFNVRDG-HGIKLLLK-SGIKVAIITGRDSPIVEKRAKDL 72 (170)
T ss_pred hhhceEEEEeccceeecCeEEEcCCCceeeeeeccCc-HHHHHHHH-cCCeEEEEeCCCCHHHHHHHHHc
Confidence 34689999999999997431 111111100 12334443 58999999999999999998753
|
|
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=93.24 E-value=0.95 Score=51.78 Aligned_cols=103 Identities=20% Similarity=0.246 Sum_probs=61.8
Q ss_pred CCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCcc
Q 004314 334 EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEP 413 (761)
Q Consensus 334 ~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~p 413 (761)
.+..++.+..++ .|=-+..+..+.++|++-|+-+ |++...|. .+ ++.+.+.+.+ +|- +-..
T Consensus 283 ~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~----L~L~~~~~--~~------~~~l~~~~~~----~Gv-~~~R 343 (468)
T PF13844_consen 283 EDAVVFGSFNNL--FKISPETLDLWARILKAVPNSR----LWLLRFPA--SG------EARLRRRFAA----HGV-DPDR 343 (468)
T ss_dssp SSSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEE----EEEEETST--TH------HHHHHHHHHH----TTS--GGG
T ss_pred CCceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcE----EEEeeCCH--HH------HHHHHHHHHH----cCC-Chhh
Confidence 355555556666 5667889999999999999865 76665443 11 1233333333 232 2346
Q ss_pred EEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeec
Q 004314 414 VVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQ 457 (761)
Q Consensus 414 V~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~ 457 (761)
|+|.. ..+.++..+.|+.+|||+-|..+-| +.+.+||+.+|.
T Consensus 344 i~f~~-~~~~~ehl~~~~~~DI~LDT~p~nG-~TTt~dALwmGV 385 (468)
T PF13844_consen 344 IIFSP-VAPREEHLRRYQLADICLDTFPYNG-GTTTLDALWMGV 385 (468)
T ss_dssp EEEEE----HHHHHHHGGG-SEEE--SSS---SHHHHHHHHHT-
T ss_pred EEEcC-CCCHHHHHHHhhhCCEEeeCCCCCC-cHHHHHHHHcCC
Confidence 88654 6688999999999999999987766 468899999865
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=92.52 E-value=0.099 Score=52.03 Aligned_cols=47 Identities=26% Similarity=0.322 Sum_probs=36.6
Q ss_pred ceeEEecCCCcCCCCCC------CCCCCCHHHHHHHHHHHhcCCCeEEEEcCCC
Q 004314 591 SRAILFDYDGTVMPQTS------INKAPSQAVISIINTLCNDARNTVFVVSGRG 638 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~------~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~ 638 (761)
.|++++|.||||.-... ....+-+.+.++|++|.+ .+..++|+|..+
T Consensus 3 ~~~~~~d~~~t~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~-~g~~l~I~Tn~~ 55 (181)
T PRK08942 3 MKAIFLDRDGVINVDSDGYVKSPDEWIPIPGSIEAIARLKQ-AGYRVVVATNQS 55 (181)
T ss_pred ccEEEEECCCCcccCCccccCCHHHeEECCCHHHHHHHHHH-CCCEEEEEeCCc
Confidence 58999999999975431 112356788999999986 588999999876
|
|
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=92.40 E-value=0.16 Score=58.96 Aligned_cols=50 Identities=16% Similarity=0.242 Sum_probs=38.5
Q ss_pred ccceeEEecCCCcCCCCCCCC---------CCCCHHHHHHHHHHHhcCCCeEEEEcCCCh
Q 004314 589 SKSRAILFDYDGTVMPQTSIN---------KAPSQAVISIINTLCNDARNTVFVVSGRGR 639 (761)
Q Consensus 589 s~~rlI~lDyDGTL~~~~~~~---------~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~ 639 (761)
.+.|+++||+||||....+.. ..+.+.+.+.|++|.+ .+..++|+|..+.
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~-~Gy~IvIvTNQ~g 224 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEA-DGFKICIFTNQGG 224 (526)
T ss_pred ccCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHH-CCCEEEEEECCcc
Confidence 457999999999999754321 1245789999999986 5899999998655
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=92.09 E-value=9.2 Score=42.62 Aligned_cols=73 Identities=11% Similarity=-0.021 Sum_probs=49.5
Q ss_pred cEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc-C-
Q 004314 413 PVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-G- 490 (761)
Q Consensus 413 pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~- 490 (761)
.|. +.++++..++.++++.|+++|-.|- |.+ .||.+.|. |+|. ...=.+.+. |
T Consensus 263 ~v~-l~~~l~~~~~l~Ll~~a~~vitdSS----ggi-~EA~~lg~-----------------Pvv~--l~~R~e~~~~g~ 317 (365)
T TIGR03568 263 NFR-LFKSLGQERYLSLLKNADAVIGNSS----SGI-IEAPSFGV-----------------PTIN--IGTRQKGRLRAD 317 (365)
T ss_pred CEE-EECCCChHHHHHHHHhCCEEEEcCh----hHH-HhhhhcCC-----------------CEEe--ecCCchhhhhcC
Confidence 355 4568999999999999999985442 122 79999876 4442 222222232 3
Q ss_pred -cEEECCCCHHHHHHHHHHHHc
Q 004314 491 -AIRVNPWNIEATAEAMHEAIQ 511 (761)
Q Consensus 491 -al~VnP~d~~~~A~ai~~aL~ 511 (761)
.+.| +.|.+++.+++.+++.
T Consensus 318 nvl~v-g~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 318 SVIDV-DPDKEEIVKAIEKLLD 338 (365)
T ss_pred eEEEe-CCCHHHHHHHHHHHhC
Confidence 3447 6689999999999554
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=91.95 E-value=0.25 Score=51.17 Aligned_cols=57 Identities=16% Similarity=0.198 Sum_probs=44.1
Q ss_pred cceeEEecCCCcCCCCCC-----------------------CCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhh---HH
Q 004314 590 KSRAILFDYDGTVMPQTS-----------------------INKAPSQAVISIINTLCNDARNTVFVVSGRGRDC---LG 643 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~-----------------------~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~---L~ 643 (761)
++-+++||+|-|++...+ ..+.+-+.++++++.|.+ .|..|+++|||+... ..
T Consensus 76 g~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~-~G~~Vf~lTGR~e~~r~~T~ 154 (229)
T TIGR01675 76 GMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIE-LGIKIFLLSGRWEELRNATL 154 (229)
T ss_pred CCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHH
Confidence 567899999999986331 134567899999999986 699999999999765 44
Q ss_pred hhcc
Q 004314 644 KWFS 647 (761)
Q Consensus 644 ~~f~ 647 (761)
+++.
T Consensus 155 ~nL~ 158 (229)
T TIGR01675 155 DNLI 158 (229)
T ss_pred HHHH
Confidence 5553
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=91.83 E-value=0.23 Score=51.90 Aligned_cols=47 Identities=17% Similarity=0.292 Sum_probs=38.2
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhh
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDC 641 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~ 641 (761)
+.+++++|+||||... ..+.+.+.++|++|.+ .+..++|+|..++..
T Consensus 7 ~~~~~~~D~dG~l~~~----~~~~pga~e~L~~L~~-~G~~~~ivTN~~~~~ 53 (242)
T TIGR01459 7 DYDVFLLDLWGVIIDG----NHTYPGAVQNLNKIIA-QGKPVYFVSNSPRNI 53 (242)
T ss_pred cCCEEEEecccccccC----CccCccHHHHHHHHHH-CCCEEEEEeCCCCCh
Confidence 3679999999999873 3467899999999996 588999988776653
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=91.80 E-value=0.13 Score=54.56 Aligned_cols=54 Identities=24% Similarity=0.355 Sum_probs=40.8
Q ss_pred ccceeEEecCCCcCCCCCC-----------------------CCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHH
Q 004314 589 SKSRAILFDYDGTVMPQTS-----------------------INKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLG 643 (761)
Q Consensus 589 s~~rlI~lDyDGTL~~~~~-----------------------~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~ 643 (761)
.++.+|++|+|+|++...+ ....+-+.+.+.|+.|.+ .+..++++|+|+.....
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~-~G~~v~iVTnR~~~~~~ 149 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANS-KGVKIFYVSNRSEKEKA 149 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHH-CCCeEEEEeCCCcchHH
Confidence 4567999999999985331 023455788999999986 58999999999855433
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=91.66 E-value=0.27 Score=50.22 Aligned_cols=36 Identities=17% Similarity=0.051 Sum_probs=28.7
Q ss_pred CCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 612 PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 612 p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
+.+.+.+.|+.|.+ .+..++|+||.....++.+...
T Consensus 86 ~~~g~~~~l~~l~~-~g~~~~IvS~~~~~~~~~~l~~ 121 (219)
T TIGR00338 86 LTEGAEELVKTLKE-KGYKVAVISGGFDLFAEHVKDK 121 (219)
T ss_pred cCCCHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHH
Confidence 45678889999986 5889999999988877776654
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=91.62 E-value=0.31 Score=45.81 Aligned_cols=68 Identities=16% Similarity=0.151 Sum_probs=40.5
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHH-----HHhhhcCEEeeeCHHHHHHHHH
Q 004314 201 DDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEIL-----KALLNADLIGFHTFDYARHFLS 273 (761)
Q Consensus 201 ~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il-----~~ll~~DligF~t~~~~~~Fl~ 273 (761)
-|+|++|+++..+++.+++++ .++|+.+.+|..+.... .++...++ ..+-.||.|-..+...++.+.+
T Consensus 74 ~Dvv~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~----~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~ 146 (160)
T PF13579_consen 74 PDVVHAHSPTAGLVAALARRR-RGIPLVVTVHGTLFRRG----SRWKRRLYRWLERRLLRRADRVIVVSEAMRRYLRR 146 (160)
T ss_dssp -SEEEEEHHHHHHHHHHHHHH-HT--EEEE-SS-T----------HHHHHHHHHHHHHHHH-SEEEESSHHHHHHHHH
T ss_pred CeEEEecccchhHHHHHHHHc-cCCcEEEEECCCchhhc----cchhhHHHHHHHHHHHhcCCEEEECCHHHHHHHHH
Confidence 489999998877777777744 48999999997543221 12222222 3345789999999888777654
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=91.57 E-value=0.2 Score=53.00 Aligned_cols=75 Identities=19% Similarity=0.209 Sum_probs=48.9
Q ss_pred cceeEEecCCCcCCCCCC-----------------C-------CCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhh
Q 004314 590 KSRAILFDYDGTVMPQTS-----------------I-------NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKW 645 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~-----------------~-------~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~ 645 (761)
.+-++++|+|+|++...+ . .+.+-+.+++.++.|.+ .|..|+++|||+-..-...
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~-~G~kIf~VSgR~e~~r~aT 178 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVS-LGFKIIFLSGRLKDKQAVT 178 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHH-CCCEEEEEeCCchhHHHHH
Confidence 357999999999994210 1 34556889999999986 6999999999986544334
Q ss_pred ccCCCCceEEccCCeEEeec
Q 004314 646 FSPCKKLGIAAEHGYFMRWS 665 (761)
Q Consensus 646 f~~~~~l~liaehGa~ir~~ 665 (761)
..++.+.|+-......+|.+
T Consensus 179 ~~NL~kaGy~~~~~LiLR~~ 198 (275)
T TIGR01680 179 EANLKKAGYHTWEKLILKDP 198 (275)
T ss_pred HHHHHHcCCCCcceeeecCC
Confidence 43333333322233444543
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=91.54 E-value=0.24 Score=51.69 Aligned_cols=50 Identities=22% Similarity=0.344 Sum_probs=38.7
Q ss_pred EEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEc---CCChhhHHhhccC
Q 004314 594 ILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVS---GRGRDCLGKWFSP 648 (761)
Q Consensus 594 I~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvS---GR~~~~L~~~f~~ 648 (761)
++||+||||.... .+-+.+.+.|+.|.+ .+..++++| ||+...+.+.+..
T Consensus 1 ~lfD~DGvL~~~~----~~~~~a~e~i~~l~~-~g~~~~~~tN~~~~~~~~~~~~l~~ 53 (236)
T TIGR01460 1 FLFDIDGVLWLGH----KPIPGAAEALNRLRA-KGKPVVFLTNNSSRSEEDYAEKLSS 53 (236)
T ss_pred CEEeCcCccCcCC----ccCcCHHHHHHHHHH-CCCeEEEEECCCCCCHHHHHHHHHH
Confidence 5799999999832 234588999999986 578888887 8999877766654
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=91.53 E-value=0.25 Score=50.59 Aligned_cols=35 Identities=20% Similarity=0.265 Sum_probs=28.5
Q ss_pred CHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 613 SQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 613 ~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
.+.+.++|+.|.+ .+..++|+||.....++..+..
T Consensus 86 ~pg~~e~l~~l~~-~g~~~~IvS~~~~~~i~~~l~~ 120 (224)
T PLN02954 86 SPGIPELVKKLRA-RGTDVYLVSGGFRQMIAPVAAI 120 (224)
T ss_pred CccHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHH
Confidence 4677788888876 5889999999999988877664
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=91.44 E-value=0.3 Score=50.20 Aligned_cols=36 Identities=11% Similarity=0.050 Sum_probs=29.1
Q ss_pred CCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 612 PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 612 p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
+.+.+.++|+.|.+ .+..++|+||.....++..+..
T Consensus 75 l~pG~~e~l~~l~~-~g~~~~IvS~~~~~~i~~il~~ 110 (219)
T PRK09552 75 IREGFHEFVQFVKE-NNIPFYVVSGGMDFFVYPLLQG 110 (219)
T ss_pred cCcCHHHHHHHHHH-cCCeEEEECCCcHHHHHHHHHH
Confidence 44666788888875 6899999999999888887765
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=91.42 E-value=0.17 Score=49.57 Aligned_cols=46 Identities=20% Similarity=0.312 Sum_probs=35.5
Q ss_pred ceeEEecCCCcCCCCCCC--------CCCCCHHHHHHHHHHHhcCCCeEEEEcCC
Q 004314 591 SRAILFDYDGTVMPQTSI--------NKAPSQAVISIINTLCNDARNTVFVVSGR 637 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~--------~~~p~~~~~~~L~~L~~d~~n~V~IvSGR 637 (761)
+++++||.||||....+. ...+-+.+.++|++|.+ ++..++|+|..
T Consensus 1 ~~~~~~d~dg~l~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~-~g~~l~IvSN~ 54 (161)
T TIGR01261 1 QKILFIDRDGTLIEEPPSDFQVDALEKLRFEKGVIPALLKLKK-AGYKFVMVTNQ 54 (161)
T ss_pred CCEEEEeCCCCccccCCCccccCCHHHeeECCCHHHHHHHHHH-CCCeEEEEeCC
Confidence 478999999999874331 12345789999999996 58899999975
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.90 E-value=0.36 Score=51.62 Aligned_cols=36 Identities=11% Similarity=0.159 Sum_probs=29.1
Q ss_pred CHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC
Q 004314 613 SQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (761)
Q Consensus 613 ~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~ 649 (761)
.+.+.++|+.|.+ .+..++|+|+.....+...+...
T Consensus 144 ~pg~~e~L~~L~~-~gi~laIvSn~~~~~~~~~L~~~ 179 (273)
T PRK13225 144 FPGVADLLAQLRS-RSLCLGILSSNSRQNIEAFLQRQ 179 (273)
T ss_pred CCCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHc
Confidence 4567788889885 58899999999999888887643
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.88 E-value=0.28 Score=54.33 Aligned_cols=47 Identities=21% Similarity=0.306 Sum_probs=38.2
Q ss_pred cceeEEecCCCcCCCCCC--------CCCCCCHHHHHHHHHHHhcCCCeEEEEcCC
Q 004314 590 KSRAILFDYDGTVMPQTS--------INKAPSQAVISIINTLCNDARNTVFVVSGR 637 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~--------~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR 637 (761)
++++++||.||||....+ ....+.+.+.+.|+.|.+ .+..++|+|+.
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~Lk~-~G~kL~IvTNq 55 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKLQK-AGYKLVMVTNQ 55 (354)
T ss_pred CCcEEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHHHh-CCCeEEEEECC
Confidence 468999999999998542 234567899999999975 68899999985
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=90.88 E-value=0.47 Score=51.89 Aligned_cols=58 Identities=17% Similarity=0.128 Sum_probs=46.9
Q ss_pred cceeEEecCCCcCCCCC--CC------CCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 590 KSRAILFDYDGTVMPQT--SI------NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~--~~------~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
.+|+|++|.|+||..-. .. -..+.+.+.+.|++|.+ .|..++|+|..+...+.+.|..
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~-~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKK-QGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHh-CCCEEEEEcCCCHHHHHHHHHh
Confidence 36899999999998743 11 11345789999999985 6899999999999999888876
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=90.63 E-value=0.52 Score=47.13 Aligned_cols=34 Identities=15% Similarity=-0.061 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 614 QAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 614 ~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
+.+.++|+.|.+ .+..++|+||.....++.++..
T Consensus 83 ~g~~e~l~~l~~-~g~~~~IvS~~~~~~~~~~l~~ 116 (201)
T TIGR01491 83 DYAEELVRWLKE-KGLKTAIVSGGIMCLAKKVAEK 116 (201)
T ss_pred ccHHHHHHHHHH-CCCEEEEEeCCcHHHHHHHHHH
Confidence 455677888875 5889999999998888887754
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.13 E-value=0.28 Score=49.47 Aligned_cols=34 Identities=12% Similarity=0.137 Sum_probs=27.2
Q ss_pred CHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 613 SQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 613 ~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
.+.+.++|+.|.+ . ..++|+||.....++.++..
T Consensus 70 ~pg~~e~L~~L~~-~-~~~~IvS~~~~~~~~~~l~~ 103 (205)
T PRK13582 70 LPGAVEFLDWLRE-R-FQVVILSDTFYEFAGPLMRQ 103 (205)
T ss_pred CCCHHHHHHHHHh-c-CCEEEEeCCcHHHHHHHHHH
Confidence 3556788888886 3 78999999999988888664
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.83 E-value=0.79 Score=50.20 Aligned_cols=35 Identities=11% Similarity=-0.063 Sum_probs=25.4
Q ss_pred CCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhcc
Q 004314 612 PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (761)
Q Consensus 612 p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~ 647 (761)
+.+.+.+.|+.|.+ .+..++|+||......+....
T Consensus 182 l~pGa~elL~~Lk~-~G~~~aIvSgg~~~~~~~l~~ 216 (322)
T PRK11133 182 LMPGLTELVLKLQA-LGWKVAIASGGFTYFADYLRD 216 (322)
T ss_pred CChhHHHHHHHHHH-cCCEEEEEECCcchhHHHHHH
Confidence 45666777888875 588999999988665555444
|
|
| >KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.43 E-value=5.3 Score=44.69 Aligned_cols=70 Identities=19% Similarity=0.143 Sum_probs=49.0
Q ss_pred HHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCc---ccc-c----CcE-EEC
Q 004314 425 ERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCS---PSL-S----GAI-RVN 495 (761)
Q Consensus 425 el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~---~~l-~----~al-~Vn 495 (761)
+.-.+-+.+.+.|+||.+|+.|-+|.|..+.|. |-|.+..+|.. ++. . -|| +|+
T Consensus 493 DYeeFVRGCHLGVFPSYYEPWGYTPAECTVMGi-----------------PSvtTNlSGFGcfMeehi~d~~ayGIYIvD 555 (692)
T KOG3742|consen 493 DYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGI-----------------PSVTTNLSGFGCFMEEHIEDPQAYGIYIVD 555 (692)
T ss_pred CHHHHhccccccccccccCCCCCCchheEEecc-----------------ccccccccchhhhHHHHhcCchhceEEEEe
Confidence 556678899999999999999999999999875 55665555533 222 1 144 442
Q ss_pred -----C-CCHHHHHHHHHHHHc
Q 004314 496 -----P-WNIEATAEAMHEAIQ 511 (761)
Q Consensus 496 -----P-~d~~~~A~ai~~aL~ 511 (761)
| .+++++++-|..-..
T Consensus 556 RRfks~deSv~qL~~~m~~F~~ 577 (692)
T KOG3742|consen 556 RRFKSPDESVQQLASFMYEFCK 577 (692)
T ss_pred cccCChhhHHHHHHHHHHHHHH
Confidence 2 346778887777665
|
|
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=89.38 E-value=32 Score=38.38 Aligned_cols=136 Identities=15% Similarity=0.166 Sum_probs=83.9
Q ss_pred CeEEEeecCcccc-CChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccE
Q 004314 336 KTVLLGVDDMDIF-KGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPV 414 (761)
Q Consensus 336 ~~vil~VdRld~~-KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV 414 (761)
+-+++..-|-... +++...+.|+.++++++|+.. +| .|.--+ +-++ +.+ +.+++. -..|
T Consensus 205 ~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~----vi---yp~H~~-~~v~-------e~~---~~~L~~--~~~v 264 (383)
T COG0381 205 KYILVTAHRRENVGEPLEEICEALREIAEEYPDVI----VI---YPVHPR-PRVR-------ELV---LKRLKN--VERV 264 (383)
T ss_pred cEEEEEcchhhcccccHHHHHHHHHHHHHhCCCce----EE---EeCCCC-hhhh-------HHH---HHHhCC--CCcE
Confidence 4566667776655 999999999999999998764 32 232111 2222 222 112222 1246
Q ss_pred EEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc-C-cE
Q 004314 415 VFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-G-AI 492 (761)
Q Consensus 415 ~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~-al 492 (761)
+++ .++...+...|...|-+.+--| |=.--||-.-+. + ++++=+.+.=.+.+. | .+
T Consensus 265 ~li-~pl~~~~f~~L~~~a~~iltDS-----GgiqEEAp~lg~---------------P-vl~lR~~TERPE~v~agt~~ 322 (383)
T COG0381 265 KLI-DPLGYLDFHNLMKNAFLILTDS-----GGIQEEAPSLGK---------------P-VLVLRDTTERPEGVEAGTNI 322 (383)
T ss_pred EEe-CCcchHHHHHHHHhceEEEecC-----CchhhhHHhcCC---------------c-EEeeccCCCCccceecCceE
Confidence 665 5899999999999996655444 223445555443 1 344444444344443 3 45
Q ss_pred EECCCCHHHHHHHHHHHHcCCH
Q 004314 493 RVNPWNIEATAEAMHEAIQMNE 514 (761)
Q Consensus 493 ~VnP~d~~~~A~ai~~aL~m~~ 514 (761)
+|+. |.+.+.+++.+++++++
T Consensus 323 lvg~-~~~~i~~~~~~ll~~~~ 343 (383)
T COG0381 323 LVGT-DEENILDAATELLEDEE 343 (383)
T ss_pred EeCc-cHHHHHHHHHHHhhChH
Confidence 6665 78999999999999765
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=89.19 E-value=0.64 Score=45.49 Aligned_cols=35 Identities=14% Similarity=-0.011 Sum_probs=26.6
Q ss_pred CHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 613 SQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 613 ~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
.+.+.+.|+.|.+ .+..++|+||.....++.++..
T Consensus 75 ~~g~~~~l~~l~~-~g~~~~ivS~~~~~~i~~~~~~ 109 (177)
T TIGR01488 75 RPGARELISWLKE-RGIDTVIVSGGFDFFVEPVAEK 109 (177)
T ss_pred CcCHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHH
Confidence 3566777777775 5788999999988888877654
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=89.08 E-value=0.62 Score=46.33 Aligned_cols=56 Identities=21% Similarity=0.256 Sum_probs=42.5
Q ss_pred ceeEEecCCCcCCCCC----------CC-------------CCCCCHHHHHHHHHHHhcCCCeEEEEcCC-ChhhHHhhc
Q 004314 591 SRAILFDYDGTVMPQT----------SI-------------NKAPSQAVISIINTLCNDARNTVFVVSGR-GRDCLGKWF 646 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~----------~~-------------~~~p~~~~~~~L~~L~~d~~n~V~IvSGR-~~~~L~~~f 646 (761)
.||++||.|+||.... +. ...+-+.+.++|+.|.+ .+..++|+|+. ....++..+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~-~G~~l~I~Sn~~~~~~~~~~L 80 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKD-AGTYLATASWNDVPEWAYEIL 80 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHH-CCCEEEEEeCCCChHHHHHHH
Confidence 4899999999998643 00 12345889999999986 68899999998 777666655
Q ss_pred c
Q 004314 647 S 647 (761)
Q Consensus 647 ~ 647 (761)
.
T Consensus 81 ~ 81 (174)
T TIGR01685 81 G 81 (174)
T ss_pred H
Confidence 4
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=89.03 E-value=0.63 Score=44.77 Aligned_cols=58 Identities=17% Similarity=0.178 Sum_probs=44.2
Q ss_pred cceeEEecCCCcCCCCC--C--C--CC-----------------CCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhc
Q 004314 590 KSRAILFDYDGTVMPQT--S--I--NK-----------------APSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWF 646 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~--~--~--~~-----------------~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f 646 (761)
++.++++|+||||+... + . .. .+-+.+.+.|+.|.+ +..++|+|+...+.++..+
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~--~~~l~I~Ts~~~~~~~~il 78 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASE--LFELVVFTAGLRMYADPVL 78 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHh--ccEEEEEeCCcHHHHHHHH
Confidence 35789999999999753 1 0 00 235688999999974 6899999999999988877
Q ss_pred cCC
Q 004314 647 SPC 649 (761)
Q Consensus 647 ~~~ 649 (761)
..+
T Consensus 79 ~~l 81 (148)
T smart00577 79 DLL 81 (148)
T ss_pred HHh
Confidence 653
|
|
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=88.59 E-value=1.9 Score=46.11 Aligned_cols=92 Identities=13% Similarity=0.114 Sum_probs=58.5
Q ss_pred CCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccE
Q 004314 335 GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPV 414 (761)
Q Consensus 335 ~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV 414 (761)
.+++++..|-.|+.+.....++|+.++ .++++ +..|.++.. +.++ ++++.++. + ..|
T Consensus 170 ~~~iLi~~GG~d~~~~~~~~l~~l~~~---~~~~~----i~vv~G~~~---~~~~----~l~~~~~~-~--------~~i 226 (279)
T TIGR03590 170 LRRVLVSFGGADPDNLTLKLLSALAES---QINIS----ITLVTGSSN---PNLD----ELKKFAKE-Y--------PNI 226 (279)
T ss_pred cCeEEEEeCCcCCcCHHHHHHHHHhcc---ccCce----EEEEECCCC---cCHH----HHHHHHHh-C--------CCE
Confidence 367999999999987666777777653 23332 333443321 2233 33444332 1 134
Q ss_pred EEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeec
Q 004314 415 VFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQ 457 (761)
Q Consensus 415 ~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~ 457 (761)
.++ + ..+++..+++.||++|.. -|.+.+|+++||.
T Consensus 227 ~~~-~--~~~~m~~lm~~aDl~Is~-----~G~T~~E~~a~g~ 261 (279)
T TIGR03590 227 ILF-I--DVENMAELMNEADLAIGA-----AGSTSWERCCLGL 261 (279)
T ss_pred EEE-e--CHHHHHHHHHHCCEEEEC-----CchHHHHHHHcCC
Confidence 433 2 357899999999999884 4589999999986
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=87.56 E-value=0.68 Score=47.13 Aligned_cols=34 Identities=18% Similarity=0.171 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 614 QAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 614 ~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
+.+.++|+.|.+ .+..++|+||.....+...+..
T Consensus 85 ~g~~~~l~~L~~-~g~~~~i~S~~~~~~~~~~l~~ 118 (214)
T PRK13288 85 ETVYETLKTLKK-QGYKLGIVTTKMRDTVEMGLKL 118 (214)
T ss_pred cCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHH
Confidence 456778888886 5889999999998888777653
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=86.99 E-value=1.2 Score=45.47 Aligned_cols=37 Identities=8% Similarity=0.027 Sum_probs=28.7
Q ss_pred CCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC
Q 004314 612 PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (761)
Q Consensus 612 p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~ 649 (761)
+.+.+.+.|+.|.+ .+..++|+||.....++.++..+
T Consensus 71 l~pg~~e~l~~l~~-~g~~~~IvS~~~~~~i~~il~~~ 107 (214)
T TIGR03333 71 IREGFREFVAFINE-HGIPFYVISGGMDFFVYPLLEGI 107 (214)
T ss_pred ccccHHHHHHHHHH-CCCeEEEECCCcHHHHHHHHHhh
Confidence 34566678888875 58899999999998888777653
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.82 E-value=0.81 Score=48.66 Aligned_cols=46 Identities=20% Similarity=0.320 Sum_probs=37.0
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChh
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRD 640 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~ 640 (761)
+.+.+++|+||||.. ...+-+...+.|++|.+ .+..++++|-.+..
T Consensus 7 ~y~~~l~DlDGvl~~----G~~~ipga~e~l~~L~~-~g~~~iflTNn~~~ 52 (269)
T COG0647 7 KYDGFLFDLDGVLYR----GNEAIPGAAEALKRLKA-AGKPVIFLTNNSTR 52 (269)
T ss_pred hcCEEEEcCcCceEe----CCccCchHHHHHHHHHH-cCCeEEEEeCCCCC
Confidence 356799999999996 44566899999999997 58888888766544
|
|
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=86.79 E-value=12 Score=41.74 Aligned_cols=98 Identities=16% Similarity=0.126 Sum_probs=60.8
Q ss_pred EcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcc----cc-c-C
Q 004314 417 IDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSP----SL-S-G 490 (761)
Q Consensus 417 ~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~----~l-~-~ 490 (761)
+.+.++.. .++..||++|. +-|.| +..|++++|. |+|+--..+-.+ .+ . |
T Consensus 279 ~~~~~p~~---~ll~~~~~~I~---hgG~~-t~~Eal~~G~-----------------P~v~~p~~~dq~~~a~~l~~~g 334 (392)
T TIGR01426 279 VRQWVPQL---EILKKADAFIT---HGGMN-STMEALFNGV-----------------PMVAVPQGADQPMTARRIAELG 334 (392)
T ss_pred EeCCCCHH---HHHhhCCEEEE---CCCch-HHHHHHHhCC-----------------CEEecCCcccHHHHHHHHHHCC
Confidence 44677764 56788998885 44666 6799999986 555543333111 12 1 3
Q ss_pred -cEEECC--CCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhh-CCHHHHHHHH
Q 004314 491 -AIRVNP--WNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVST-HDVAYWARSF 540 (761)
Q Consensus 491 -al~VnP--~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~Wa~~~ 540 (761)
|+.++. .+.++++++|.++|..+ +.+.+.+++.+.+.. ......++.+
T Consensus 335 ~g~~l~~~~~~~~~l~~ai~~~l~~~--~~~~~~~~l~~~~~~~~~~~~aa~~i 386 (392)
T TIGR01426 335 LGRHLPPEEVTAEKLREAVLAVLSDP--RYAERLRKMRAEIREAGGARRAADEI 386 (392)
T ss_pred CEEEeccccCCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 555653 46799999999999864 455555555555544 3445555433
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=86.55 E-value=0.55 Score=46.46 Aligned_cols=58 Identities=9% Similarity=0.036 Sum_probs=42.5
Q ss_pred ceeEEecCCCcCCCCC----CCC---CCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC
Q 004314 591 SRAILFDYDGTVMPQT----SIN---KAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~----~~~---~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~ 649 (761)
.|+++||.||||++.+ ... +.-+.+=-..++.|.+ .+..++|+|+++...++..+..+
T Consensus 7 i~~~v~d~dGv~tdg~~~~~~~g~~~~~~~~~D~~~~~~L~~-~Gi~laIiT~k~~~~~~~~l~~l 71 (169)
T TIGR02726 7 IKLVILDVDGVMTDGRIVINDEGIESRNFDIKDGMGVIVLQL-CGIDVAIITSKKSGAVRHRAEEL 71 (169)
T ss_pred CeEEEEeCceeeECCeEEEcCCCcEEEEEecchHHHHHHHHH-CCCEEEEEECCCcHHHHHHHHHC
Confidence 7999999999999853 111 1122333455667765 58999999999999999988764
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=86.42 E-value=1.3 Score=43.57 Aligned_cols=35 Identities=9% Similarity=0.020 Sum_probs=24.0
Q ss_pred CHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 613 SQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 613 ~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
.+.+.++|+.|.+ .+..++|+|+.....++..+..
T Consensus 74 ~~g~~~ll~~l~~-~g~~~~i~S~~~~~~~~~~l~~ 108 (188)
T TIGR01489 74 DPGFKEFIAFIKE-HGIDFIVISDGNDFFIDPVLEG 108 (188)
T ss_pred CccHHHHHHHHHH-cCCcEEEEeCCcHHHHHHHHHH
Confidence 3456667777764 4678888888887777666553
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=86.12 E-value=0.094 Score=54.55 Aligned_cols=76 Identities=21% Similarity=0.245 Sum_probs=51.6
Q ss_pred ccceeEEecCCCcCCCCCC-----------------------CCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhh
Q 004314 589 SKSRAILFDYDGTVMPQTS-----------------------INKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKW 645 (761)
Q Consensus 589 s~~rlI~lDyDGTL~~~~~-----------------------~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~ 645 (761)
.++.+|+||+|+|++...+ ....+-+..++.++.+.+ .|..|+++|||+...-...
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~-~G~~V~~iT~R~~~~r~~T 148 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARS-RGVKVFFITGRPESQREAT 148 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHH-TTEEEEEEEEEETTCHHHH
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHH-CCCeEEEEecCCchhHHHH
Confidence 4578999999999984211 012344678899999886 6999999999998855555
Q ss_pred ccCCCCceEEccCCeEEeec
Q 004314 646 FSPCKKLGIAAEHGYFMRWS 665 (761)
Q Consensus 646 f~~~~~l~liaehGa~ir~~ 665 (761)
..++...|+-.-.+.+++..
T Consensus 149 ~~nL~~~G~~~~~~l~lr~~ 168 (229)
T PF03767_consen 149 EKNLKKAGFPGWDHLILRPD 168 (229)
T ss_dssp HHHHHHHTTSTBSCGEEEEE
T ss_pred HHHHHHcCCCccchhccccc
Confidence 44443344434355566654
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=86.02 E-value=1 Score=46.22 Aligned_cols=34 Identities=9% Similarity=-0.071 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 614 QAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 614 ~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
+.+.++|+.|.+ .+..++|+||.....++..++.
T Consensus 95 ~g~~~~l~~l~~-~g~~~~i~S~~~~~~~~~~l~~ 128 (222)
T PRK10826 95 PGVREALALCKA-QGLKIGLASASPLHMLEAVLTM 128 (222)
T ss_pred CCHHHHHHHHHH-CCCeEEEEeCCcHHHHHHHHHh
Confidence 346677777775 5889999999998887777654
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=85.30 E-value=1.4 Score=44.87 Aligned_cols=34 Identities=15% Similarity=0.182 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 614 QAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 614 ~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
+.+.+.|+.|.+ .+..++|+||.....+...+..
T Consensus 90 ~G~~~~L~~L~~-~g~~~~ivT~~~~~~~~~~l~~ 123 (220)
T TIGR03351 90 PGAEEAFRSLRS-SGIKVALTTGFDRDTAERLLEK 123 (220)
T ss_pred CCHHHHHHHHHH-CCCEEEEEeCCchHHHHHHHHH
Confidence 345567788875 4889999999999988877754
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=85.24 E-value=1.4 Score=48.22 Aligned_cols=48 Identities=17% Similarity=0.313 Sum_probs=33.3
Q ss_pred eEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhc---CCCeEEEE---cCCChhhHHh
Q 004314 593 AILFDYDGTVMPQTSINKAPSQAVISIINTLCND---ARNTVFVV---SGRGRDCLGK 644 (761)
Q Consensus 593 lI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d---~~n~V~Iv---SGR~~~~L~~ 644 (761)
.++||+||||.. ...+-+...++|+.|... -+..++++ ||++.....+
T Consensus 2 ~~ifD~DGvL~~----g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~ 55 (321)
T TIGR01456 2 GFAFDIDGVLFR----GKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAE 55 (321)
T ss_pred EEEEeCcCceEC----CccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHH
Confidence 578999999997 334578899999999863 04555444 5666665433
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=84.59 E-value=12 Score=40.98 Aligned_cols=132 Identities=14% Similarity=0.144 Sum_probs=82.7
Q ss_pred cCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCC
Q 004314 343 DDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVT 422 (761)
Q Consensus 343 dRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~ 422 (761)
-.-|++-+....|+++.+.+. .+ +..+ . |- +.|...+++.++|.+.+.++ ||. ..+..++..++
T Consensus 192 NSgd~sNnHieaL~~L~~~~~--~~----~kIi--v-PL-sYg~~n~~Yi~~V~~~~~~l---F~~---~~~~iL~e~mp 255 (360)
T PF07429_consen 192 NSGDPSNNHIEALEALKQQFG--DD----VKII--V-PL-SYGANNQAYIQQVIQAGKEL---FGA---ENFQILTEFMP 255 (360)
T ss_pred CCCCCCccHHHHHHHHHHhcC--CC----eEEE--E-EC-CCCCchHHHHHHHHHHHHHh---cCc---cceeEhhhhCC
Confidence 446778777766666554321 12 2222 2 21 12333567777877777665 443 24666788999
Q ss_pred HHHHHHHHHhcccceecccc-cCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc-CcEEE----CC
Q 004314 423 LSERAAYYTIAECVVVTAVR-DGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-GAIRV----NP 496 (761)
Q Consensus 423 ~~el~aly~~ADv~vvtS~~-EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~al~V----nP 496 (761)
.+|..++++.+|+.++...| .|||-..+ .+.+| .++++|+-.-....+. .++.| +.
T Consensus 256 f~eYl~lL~~cDl~if~~~RQQgiGnI~l-Ll~~G-----------------~~v~L~~~np~~~~l~~~~ipVlf~~d~ 317 (360)
T PF07429_consen 256 FDEYLALLSRCDLGIFNHNRQQGIGNICL-LLQLG-----------------KKVFLSRDNPFWQDLKEQGIPVLFYGDE 317 (360)
T ss_pred HHHHHHHHHhCCEEEEeechhhhHhHHHH-HHHcC-----------------CeEEEecCChHHHHHHhCCCeEEecccc
Confidence 99999999999999999975 99997654 23443 3888888766666663 34333 44
Q ss_pred CCHHHHHHHHHH
Q 004314 497 WNIEATAEAMHE 508 (761)
Q Consensus 497 ~d~~~~A~ai~~ 508 (761)
-|...+++|=++
T Consensus 318 L~~~~v~ea~rq 329 (360)
T PF07429_consen 318 LDEALVREAQRQ 329 (360)
T ss_pred CCHHHHHHHHHH
Confidence 445555554443
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=83.16 E-value=1.4 Score=44.93 Aligned_cols=35 Identities=14% Similarity=0.140 Sum_probs=27.1
Q ss_pred CHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 613 SQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 613 ~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
-+.+.+.|+.|.+ .+..++|+||.....+..++..
T Consensus 95 ~~g~~~~l~~l~~-~g~~~~i~S~~~~~~~~~~l~~ 129 (226)
T PRK13222 95 YPGVKETLAALKA-AGYPLAVVTNKPTPFVAPLLEA 129 (226)
T ss_pred CCCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHH
Confidence 3456667777775 5889999999999888888764
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=82.94 E-value=1.7 Score=44.67 Aligned_cols=36 Identities=14% Similarity=0.110 Sum_probs=30.3
Q ss_pred CCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 612 PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 612 p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
+-+.+.++|..|.+ .+...+|+|+++...++..+..
T Consensus 90 ~~~gv~e~L~~L~~-~g~~l~i~T~k~~~~~~~~l~~ 125 (220)
T COG0546 90 LFPGVKELLAALKS-AGYKLGIVTNKPERELDILLKA 125 (220)
T ss_pred cCCCHHHHHHHHHh-CCCeEEEEeCCcHHHHHHHHHH
Confidence 34567788999996 6889999999999999988874
|
|
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=82.87 E-value=1.1 Score=43.39 Aligned_cols=56 Identities=13% Similarity=0.242 Sum_probs=38.1
Q ss_pred eeEEecCCCcCCCCCCCC----------------CCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC
Q 004314 592 RAILFDYDGTVMPQTSIN----------------KAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (761)
Q Consensus 592 rlI~lDyDGTL~~~~~~~----------------~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~ 649 (761)
|+++||+||||+...... -..-|.+.+.|+.|++ ...|+|.|..+..........+
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~--~~ev~i~T~~~~~ya~~v~~~l 72 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSK--HYEVVIWTSASEEYAEPVLDAL 72 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHH--HCEEEEE-SS-HHHHHHHHHHH
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHH--hceEEEEEeehhhhhhHHHHhh
Confidence 589999999999644211 0134678888999875 5899999999988777766543
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=82.59 E-value=1.8 Score=44.61 Aligned_cols=35 Identities=17% Similarity=0.247 Sum_probs=27.6
Q ss_pred CCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhcc
Q 004314 612 PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (761)
Q Consensus 612 p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~ 647 (761)
+-+.+.++|+.|.+ .+..++++|+.++..++..+.
T Consensus 87 ~~pGv~~~l~~L~~-~~i~~avaS~s~~~~~~~~L~ 121 (221)
T COG0637 87 PIPGVVELLEQLKA-RGIPLAVASSSPRRAAERVLA 121 (221)
T ss_pred CCccHHHHHHHHHh-cCCcEEEecCChHHHHHHHHH
Confidence 34567788889886 468899999999887777775
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=82.58 E-value=1.1 Score=46.10 Aligned_cols=35 Identities=14% Similarity=0.078 Sum_probs=26.6
Q ss_pred CCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhcc
Q 004314 612 PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (761)
Q Consensus 612 p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~ 647 (761)
..+...++++.|.+ .+.+|+|+||-.....++...
T Consensus 78 l~~ga~elv~~lk~-~G~~v~iiSgg~~~lv~~ia~ 112 (212)
T COG0560 78 LTPGAEELVAALKA-AGAKVVIISGGFTFLVEPIAE 112 (212)
T ss_pred CCccHHHHHHHHHH-CCCEEEEEcCChHHHHHHHHH
Confidence 45667888888886 699999999988765555443
|
|
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=82.49 E-value=11 Score=42.09 Aligned_cols=73 Identities=19% Similarity=0.175 Sum_probs=48.5
Q ss_pred EEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCC----cccc-
Q 004314 414 VVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGC----SPSL- 488 (761)
Q Consensus 414 V~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~----~~~l- 488 (761)
|. +.+.++.. +++..||++| .+-|+ -+..|++++|. |+|+--+.+- +..+
T Consensus 290 v~-~~~~~p~~---~ll~~~d~~I---~hgG~-~t~~eal~~Gv-----------------P~v~~P~~~dQ~~~a~~~~ 344 (401)
T cd03784 290 VR-VVDFVPHD---WLLPRCAAVV---HHGGA-GTTAAALRAGV-----------------PQLVVPFFGDQPFWAARVA 344 (401)
T ss_pred eE-EeCCCCHH---HHhhhhheee---ecCCc-hhHHHHHHcCC-----------------CEEeeCCCCCcHHHHHHHH
Confidence 44 44567755 4577899998 45665 47799999986 5555444441 2222
Q ss_pred -cC-cEEECCC--CHHHHHHHHHHHHc
Q 004314 489 -SG-AIRVNPW--NIEATAEAMHEAIQ 511 (761)
Q Consensus 489 -~~-al~VnP~--d~~~~A~ai~~aL~ 511 (761)
.| |+.+++. +.+++++++.++|+
T Consensus 345 ~~G~g~~l~~~~~~~~~l~~al~~~l~ 371 (401)
T cd03784 345 ELGAGPALDPRELTAERLAAALRRLLD 371 (401)
T ss_pred HCCCCCCCCcccCCHHHHHHHHHHHhC
Confidence 13 5555554 68999999999998
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=82.26 E-value=4.6 Score=45.80 Aligned_cols=80 Identities=16% Similarity=0.178 Sum_probs=59.4
Q ss_pred CHHHHHHHHHhccceeEEecCCCcCCCCC----C------CCC---CCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHh
Q 004314 578 SIDAIVSAYLRSKSRAILFDYDGTVMPQT----S------INK---APSQAVISIINTLCNDARNTVFVVSGRGRDCLGK 644 (761)
Q Consensus 578 ~~~~i~~~y~~s~~rlI~lDyDGTL~~~~----~------~~~---~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~ 644 (761)
.+..++.|-.....|.++||+|+||..-. . .+. .+-.++.+.+..|.+ +|...+|+|-......++
T Consensus 209 ei~Sl~~A~~g~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l~k-qGVlLav~SKN~~~da~e 287 (574)
T COG3882 209 EIASLLAAMSGKSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGLKK-QGVLLAVCSKNTEKDAKE 287 (574)
T ss_pred HHHHHHHHhhCcccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHHHh-ccEEEEEecCCchhhHHH
Confidence 45667777777788999999999998622 0 111 233566777888885 688999999999999999
Q ss_pred hccCCCCceEEccC
Q 004314 645 WFSPCKKLGIAAEH 658 (761)
Q Consensus 645 ~f~~~~~l~liaeh 658 (761)
.|..-|.+.|=-||
T Consensus 288 vF~khp~MiLkeed 301 (574)
T COG3882 288 VFRKHPDMILKEED 301 (574)
T ss_pred HHhhCCCeEeeHhh
Confidence 99876766553333
|
|
| >PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins | Back alignment and domain information |
|---|
Probab=81.90 E-value=0.65 Score=46.64 Aligned_cols=29 Identities=10% Similarity=0.377 Sum_probs=20.5
Q ss_pred CCCHHHHHHHHHHHhcCCCeEEEEcCCChh
Q 004314 611 APSQAVISIINTLCNDARNTVFVVSGRGRD 640 (761)
Q Consensus 611 ~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~ 640 (761)
.|-+...++|++|.+ .+..++++|+|+..
T Consensus 73 ~p~~gA~e~l~~L~~-~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 73 PPIPGAVEALKKLRD-KGHEIVIITARPPE 101 (191)
T ss_dssp -B-TTHHHHHHHHHT-STTEEEEEEE-SSS
T ss_pred CccHHHHHHHHHHHH-cCCcEEEEEecCcc
Confidence 356788999999996 56678777778754
|
5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A .... |
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=81.65 E-value=49 Score=36.83 Aligned_cols=85 Identities=18% Similarity=0.143 Sum_probs=56.5
Q ss_pred HHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCC--ccc------c---cCc
Q 004314 423 LSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGC--SPS------L---SGA 491 (761)
Q Consensus 423 ~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~--~~~------l---~~a 491 (761)
.+++.++|++||+++.=|= +++.-|..++|. |.|+=-+... .++ + ..|
T Consensus 243 ~~dm~~~~~~ADLvIsRaG----a~Ti~E~~a~g~-----------------P~IliP~p~~~~~~Q~~NA~~l~~~gaa 301 (357)
T COG0707 243 IDDMAALLAAADLVISRAG----ALTIAELLALGV-----------------PAILVPYPPGADGHQEYNAKFLEKAGAA 301 (357)
T ss_pred HhhHHHHHHhccEEEeCCc----ccHHHHHHHhCC-----------------CEEEeCCCCCccchHHHHHHHHHhCCCE
Confidence 3579999999999886442 578999999987 3443333333 122 2 136
Q ss_pred EEECCCC--HHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhh
Q 004314 492 IRVNPWN--IEATAEAMHEAIQMNEAEKQLRHEKHYRYVST 530 (761)
Q Consensus 492 l~VnP~d--~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~ 530 (761)
+.+.-.+ ++.+++.|.++++.+ |+..+|....+.+..
T Consensus 302 ~~i~~~~lt~~~l~~~i~~l~~~~--~~l~~m~~~a~~~~~ 340 (357)
T COG0707 302 LVIRQSELTPEKLAELILRLLSNP--EKLKAMAENAKKLGK 340 (357)
T ss_pred EEeccccCCHHHHHHHHHHHhcCH--HHHHHHHHHHHhcCC
Confidence 7776555 899999999999863 555555554444433
|
|
| >COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B | Back alignment and domain information |
|---|
Probab=81.28 E-value=9.5 Score=36.57 Aligned_cols=73 Identities=19% Similarity=0.211 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHh
Q 004314 353 LKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTI 432 (761)
Q Consensus 353 ~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ 432 (761)
.-+.++..+++++ ++..|.||-|-..+|..+. ..+.+++.++++..+|+- ||++.+...+..+-.+.+..
T Consensus 40 ~~~~~l~~li~~~-----~~~~vVVGlP~~m~g~~~~-~~~~~~~f~~~L~~r~~l----pv~l~DERltTv~A~~~L~~ 109 (141)
T COG0816 40 QDFNALLKLVKEY-----QVDTVVVGLPLNMDGTEGP-RAELARKFAERLKKRFNL----PVVLWDERLSTVEAERMLIE 109 (141)
T ss_pred hhHHHHHHHHHHh-----CCCEEEEecCcCCCCCcch-hHHHHHHHHHHHHHhcCC----CEEEEcCccCHHHHHHHHHH
Confidence 3445556666655 3668889999877777665 667789999999999864 89999988888777776666
Q ss_pred ccc
Q 004314 433 AEC 435 (761)
Q Consensus 433 ADv 435 (761)
+++
T Consensus 110 ~~~ 112 (141)
T COG0816 110 AGV 112 (141)
T ss_pred cCC
Confidence 443
|
subtilis) [DNA replication, recombination, and repair] |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 761 | ||||
| 2wtx_A | 474 | Insight Into The Mechanism Of Enzymatic Glycosyltra | 3e-49 | ||
| 1uqu_A | 482 | Trehalose-6-Phosphate From E. Coli Bound With Udp-G | 3e-49 | ||
| 1gz5_A | 456 | Trehalose-6-Phosphate Synthase. Otsa Length = 456 | 7e-48 | ||
| 3t5t_A | 496 | Vall From Streptomyces Hygroscopicus In Apo Form Le | 9e-10 | ||
| 4f96_B | 497 | Crystal Structure Of Vlde, The Pseudo-Glycosyltrans | 9e-10 | ||
| 3t7d_A | 497 | Vall From Streptomyces Hygroscopicus In Complex Wit | 6e-08 |
| >pdb|2WTX|A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase Length = 474 | Back alignment and structure |
|
| >pdb|1UQU|A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. Length = 482 | Back alignment and structure |
|
| >pdb|1GZ5|A Chain A, Trehalose-6-Phosphate Synthase. Otsa Length = 456 | Back alignment and structure |
|
| >pdb|3T5T|A Chain A, Vall From Streptomyces Hygroscopicus In Apo Form Length = 496 | Back alignment and structure |
|
| >pdb|4F96|B Chain B, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase, In Complex With Gdp Length = 497 | Back alignment and structure |
|
| >pdb|3T7D|A Chain A, Vall From Streptomyces Hygroscopicus In Complex With Trehalose Length = 497 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* Length = 482 | Back alignment and structure |
|---|
Score = 631 bits (1630), Expect = 0.0
Identities = 123/494 (24%), Positives = 235/494 (47%), Gaps = 34/494 (6%)
Query: 62 RVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSEQ 121
R+++V+N++ + G L + + L + ++ G + E
Sbjct: 3 RLVVVSNRIAPPDEHAASAGG---------LAVGILGAL-KAAGGLWFGWSGETGN--ED 50
Query: 122 DDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEA 181
+ ++ L L ++Y+ F LWP FHY L +F R W+
Sbjct: 51 QPLKKVKKGNITWASFNLSEQDLDEYYNQFSNAVLWPAFHYRLDLV-----QFQRPAWDG 105
Query: 182 YVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIY 241
Y+ N + + +++ ++ DD +WIHDYHL+ LR+R R+GFFLH PFP+ EI+
Sbjct: 106 YLRVNALLADKLLPLLQD-DDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIF 164
Query: 242 RTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGI 301
LP + +L+ L + DL+GF T + FL C S + + +S + + +G+
Sbjct: 165 NALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHT---AWGKAFRT 221
Query: 302 KIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHL 361
++ P+GI +I ++ +LK + + + V+ +D KG+ + LA E L
Sbjct: 222 EVYPIGIEPKEIAKQAA-GPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEAL 280
Query: 362 LKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPV 421
L+++P+ G+ QIA +RG + ++I+ ++ RIN +G+ G+ P+ ++++
Sbjct: 281 LEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHF 340
Query: 422 TLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEF 481
+ ++ +VT +RDGMNL EY+ + +LV+S+F
Sbjct: 341 DRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP------------ANPGVLVLSQF 388
Query: 482 IGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFF 541
G + L+ A+ VNP++ + A A+ A+ M+ AE+ RH + + +D+ +W F
Sbjct: 389 AGAANELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFI 448
Query: 542 QDMERTCKDHFKRR 555
D+++ + +
Sbjct: 449 SDLKQIVPRSAESQ 462
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 3t7d_A* Length = 496 | Back alignment and structure |
|---|
Score = 582 bits (1502), Expect = 0.0
Identities = 81/505 (16%), Positives = 177/505 (35%), Gaps = 38/505 (7%)
Query: 62 RVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDL--- 118
+ + + + + P W + + + ++ S + D
Sbjct: 4 EIFLASKRAAITYDTDPATGEPRA-WLAPGGTGNVVAEQAGVLNISWIASADSEDDRRAS 62
Query: 119 SEQDDVSQLLLDRFKCVPAFL---PPDILTKFYHGFCKQHLWPLFHYMLPFSATHG-GRF 174
+ D + L + + L P + + +W +Y G
Sbjct: 63 ALNPDGVTMELHSGREILVRLIRHDPAVFRNVQNFMTANLMWAANNYGWDRWTQPSFGSD 122
Query: 175 DRSLWEAYVSANKIFSQRVIEVINP-EDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHS 233
R W + + F+ +++ D +HDY L+ +P LR + + F+H
Sbjct: 123 AREGWADFGRFTRDFADAILKSSAQSADPVYLVHDYQLVGVPALLREQRPDAPILLFVHI 182
Query: 234 PFPSSEIYRTLP--VREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIG 291
P+PS++ +R LP +R IL +L A IGF + R+FL + +L + + R +
Sbjct: 183 PWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLESVADLLP-DARIDREAMT 241
Query: 292 LEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGV 351
+E+ G ++ MP+G ++ + +++ +G +++ D K
Sbjct: 242 VEWRGHRTRLRTMPLGYSPLTLD-----GRNPQLPEGIEEWADGHRLVVHSGRTDPIKNA 296
Query: 352 DLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGY 411
+ + A +L + ++ NP R + + N G
Sbjct: 297 ERAVRAF--VLAARGGGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGS--- 351
Query: 412 EPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAP 471
V ID ++ A + A+ ++ + DG NL+ +E + +
Sbjct: 352 -DTVRIDNDNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNE-------------- 396
Query: 472 KKSMLVVSEFIGCSPSLSGAIR-VNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVST 530
+ + +++SE G + L R VNP+++ AEA+ A+ ++ +
Sbjct: 397 RDADVILSETCGAAEVLGEYCRSVNPFDLVEQAEAISAALAAGPRQRAEAAARRRDAARP 456
Query: 531 HDVAYWARSFFQDMERTCKDHFKRR 555
+ W ++ +
Sbjct: 457 WTLEAWVQAQLDGLAADHAARTATA 481
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 Length = 239 | Back alignment and structure |
|---|
Score = 160 bits (407), Expect = 5e-45
Identities = 27/165 (16%), Positives = 60/165 (36%), Gaps = 13/165 (7%)
Query: 593 AILFDYDGTVMPQTSINKAPSQAVIS--IINTLCN-DARNTVFVVSGRGRDCLGKWFSPC 649
I DYDGT++P I P ++ +++ + + R ++V+GR + + ++
Sbjct: 3 LIFLDYDGTLVP---IIMNPEESYADAGLLSLISDLKERFDTYIVTGRSPEEISRFLPLD 59
Query: 650 KKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALV 709
+ + HG + + + N G + + G I K A++
Sbjct: 60 --INMICYHGACSKINGQIVYNNGSDRFL-GVFDRIYEDTRSWVSDFPGLRIYRKNLAVL 116
Query: 710 WHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQ 754
+H +L +E + G+ I+E++
Sbjct: 117 YHLGLMGA----DMKPKLRSRIEEIARIFGVETYYGKMIIELRVP 157
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 69.1 bits (168), Expect = 4e-12
Identities = 72/546 (13%), Positives = 154/546 (28%), Gaps = 173/546 (31%)
Query: 114 VDVDLSEQD----DVSQLLLDRFK----C--VPAFLPPDILTKFYHGFCKQHLWPLFHYM 163
+D + E D+ + D F C V IL+K H+ M
Sbjct: 7 MDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKS-ILSK---EEID-HI-----IM 56
Query: 164 LPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHD-YHLMVL-PTFLRRR 221
+ + R W ++ + V EV+ +Y ++ P+ + R
Sbjct: 57 SKDAVS---GTLRLFWTLLSKQEEMVQKFVEEVLRI--NYKFLMSPIKTEQRQPSMMTRM 111
Query: 222 F--TRLRMGFFLHSPFPSSEIYRTLPV-REEILKALLNADLIGFHTFDYARHFLSCCSRM 278
+ R R+ + ++++ V R + L A
Sbjct: 112 YIEQRDRL-------YNDNQVFAKYNVSRLQPYLKLRQA--------------------- 143
Query: 279 LGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKT- 337
L + + G + G G+ + + A +++ + + K
Sbjct: 144 --LLELRPAKNVLI--DG-------VL-GS--GK--TWV--ALDVCLSYKVQCKMDFKIF 185
Query: 338 -VLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIH 396
+ L + + L ++ LL QI R I+ IH
Sbjct: 186 WLNLKNCNSP-----ETVLEMLQKLL------------YQIDPNWTSRSDHSSNIKLRIH 228
Query: 397 ATCKRINETFGRPGYEPVVFI--DKPVTLSERAAYYTIAEC-VVVT----AVRDGMNLTP 449
+ + YE + + + V ++ + + C +++T V D ++
Sbjct: 229 SIQAELRRLLKSKPYENCLLVLLN--VQNAKAWNAFNL-SCKILLTTRFKQVTDFLSAAT 285
Query: 450 YEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPS-L-SGAIRVNPWNIEATAEAMH 507
+I + S + P + ++ +++ C P L + NP + AE++
Sbjct: 286 TTHIS-------LDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIR 338
Query: 508 EAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERTCKDHFKRRCWGIGLSFGFRV 567
+ + + W + I S +
Sbjct: 339 DGLATWD--------------------NWKHVNCDKLTTI-----------IESS----L 363
Query: 568 VALDPN-----FRKLSIDAIVSAYLRSKSRAILFDYDGTVMPQT-SI--NKAPSQAVISI 619
L+P F +LS+ F + S+ V+ +
Sbjct: 364 NVLEPAEYRKMFDRLSV----------------FPPSAHIPTILLSLIWFDVIKSDVMVV 407
Query: 620 INTLCN 625
+N L
Sbjct: 408 VNKLHK 413
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.8 bits (110), Expect = 3e-05
Identities = 41/291 (14%), Positives = 89/291 (30%), Gaps = 84/291 (28%)
Query: 120 EQDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHG-GRFDRSL 178
D+V LLL C P LP ++ + P ++ S G +D
Sbjct: 299 TPDEVKSLLLKYLDCRPQDLPREV--------LTTN--PRRLSIIAESIRDGLATWDN-- 346
Query: 179 WEAYVSANKIFS--QRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFP 236
W+ +V+ +K+ + + + V+ P + R+ F RL + F + P
Sbjct: 347 WK-HVNCDKLTTIIESSLNVLEPAE----------------YRKMFDRLSV-FPPSAHIP 388
Query: 237 SS--EIYRTLPVREEIL--------KALLNADLIGFHTFDYARHFLSCCS--------RM 278
+ + ++ +++ +L+ + + R
Sbjct: 389 TILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRS 448
Query: 279 LGLEYQSKR-------------GYIGLEYYGRTVGIKIMPVGIHMGQIE-----SVLRLA 320
+ Y + Y + G H+ IE ++ R+
Sbjct: 449 IVDHYNIPKTFDSDDLIPPYLDQYF-YSHIGH-----------HLKNIEHPERMTLFRMV 496
Query: 321 DKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGR 371
D+R E K + + ++ + LK ++ PK++
Sbjct: 497 FLDFRFLEQKIRHDSTAWNASGSILNTLQ--QLKFYK-PYICDNDPKYERL 544
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Length = 413 | Back alignment and structure |
|---|
Score = 45.9 bits (108), Expect = 3e-05
Identities = 37/300 (12%), Positives = 86/300 (28%), Gaps = 25/300 (8%)
Query: 240 IYRTLPVREEILKALLNADLIGFHTFDYARH-----FLSCCSRMLGLEYQSKRGYIGLEY 294
+ K ++ + ++ +++G+ SK +
Sbjct: 91 PIVIGNYLLAMGKCSHRTKIVLYVDLVSKNIRENLWWIFSHPKVVGVMAMSKCWISDICN 150
Query: 295 YGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLK 354
YG V I I+ + I D R ++ + L ++ K +D+
Sbjct: 151 YGCKVPINIVSHFVDTKTI--------YDARKLVGLSEYNDDVLFLNMNRNTARKRLDIY 202
Query: 355 LLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPV 414
+LA + ++P + + + N DL I N +
Sbjct: 203 VLAAARFISKYPDAK----VRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNK---I 255
Query: 415 VFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSS--ESSAPK 472
+ +T Y + +V + +G L E V + + S + +
Sbjct: 256 MINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVGGADDYFSGD 315
Query: 473 KSMLVVSEFIGCSPSLSGAIRVNPW-NIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTH 531
+ G + +++ EA +E ++ ++ +V T
Sbjct: 316 CVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF--TFFKDEKNRKEYGKRVQDFVKTK 373
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 1e-04
Identities = 45/289 (15%), Positives = 91/289 (31%), Gaps = 60/289 (20%)
Query: 170 HGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRF---TRLR 226
+ + E Y++ N+ S + I++ + DYV +HD L F ++ R
Sbjct: 99 ESLKLTEEMKELYLNVNRENS-KFIDLSSF--DYVLVHDPQPAALIEFYEKKSPWLWRCH 155
Query: 227 MGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSK 286
+ + + R + + ++ + E
Sbjct: 156 IDLSSPNREFWEFLRRFV---------------------EKYDRYIFHLPEYVQPELDRN 194
Query: 287 RGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVD 343
+ IMP I S + K + + ++F K ++ V
Sbjct: 195 K-------------AVIMPPSID---PLSEKNVELKQTEILRILERFDVDPEKPIITQVS 238
Query: 344 DMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRG-KDLEEIQAEIHATCKRI 402
D +KG+ + + ++ P Q +LV G D E T ++I
Sbjct: 239 RFDPWKGIFDVIEIYRKVKEKIPGVQ--LLLV-------GVMAHDDPEGWIYFEKTLRKI 289
Query: 403 NETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYE 451
E + I E A+ ++ ++ ++R+G LT E
Sbjct: 290 GEDYD--VKVLTNLIGVHA--REVNAFQRASDVILQMSIREGFGLTVTE 334
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* Length = 262 | Back alignment and structure |
|---|
Score = 42.2 bits (98), Expect = 3e-04
Identities = 26/170 (15%), Positives = 48/170 (28%), Gaps = 16/170 (9%)
Query: 585 AYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGK 644
A R + LFD DGT+ P + V + + L + R + VV G + +
Sbjct: 7 AARRKERVLCLFDVDGTLTPA---RQKIDPEVAAFLQKLRS--RVQIGVVGGSDYCKIAE 61
Query: 645 WFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKL-----------YT 693
++ ++ + + + E + L
Sbjct: 62 QLGDGDEVIEKFDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRL 121
Query: 694 ESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVK 743
G++IE + L LD E + A+K
Sbjct: 122 PKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSELDKKEKIREKFVEALK 171
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413 | Back alignment and structure |
|---|
Score = 41.7 bits (97), Expect = 6e-04
Identities = 19/227 (8%), Positives = 56/227 (24%), Gaps = 47/227 (20%)
Query: 321 DKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANP 380
+ + ++ + K +L+ L + A++ ++++ + +
Sbjct: 227 NTTLKNYINDKRQKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYD--RSNEWKIISV-- 282
Query: 381 ARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTA 440
G + IH +TL + A + +
Sbjct: 283 --GEKHKDIALGKGIHLNSLG------------------KLTLEDYADLLKRSSIGISLM 322
Query: 441 VRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPW 497
+ + P E + V++ + + +
Sbjct: 323 ISPHPSYPPLEMAHFG------------------LRVITNKYENKDLSNWHSNIVSLEQL 364
Query: 498 NIEATAEAMHEAIQMNEAEKQLRH--EKHYRYVSTHDVAYWARSFFQ 542
N E AE + E + Y++ + + + +
Sbjct: 365 NPENIAETLVELCMSFNNRDVDKKESSNMMFYINEFNEFSFIKEIEE 411
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 761 | |||
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 100.0 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 100.0 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 99.95 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 99.92 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 99.91 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 99.91 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 99.91 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 99.9 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 99.9 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 99.9 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 99.9 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 99.9 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 99.89 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 99.89 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 99.89 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.85 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 99.83 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 99.83 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.76 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.73 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.72 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 99.72 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 99.7 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.65 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 99.63 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.62 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.6 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.55 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.54 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 99.53 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.44 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 99.43 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 99.43 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.36 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.35 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.31 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 99.26 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.25 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.23 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 99.22 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 99.2 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 99.18 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 99.17 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 99.16 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.16 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.13 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.1 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 99.09 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.07 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.03 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.01 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.95 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 98.93 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.92 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.79 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 98.72 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 98.71 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.58 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 98.2 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 97.98 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 97.94 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 97.93 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 97.88 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 97.85 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 97.84 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 97.77 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 97.62 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 97.41 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 97.39 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 97.3 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 97.3 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 97.3 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 97.29 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.2 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 97.16 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 97.02 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 97.0 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 96.91 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 96.81 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 96.77 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 96.72 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 96.71 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 96.63 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 96.6 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 96.42 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 96.33 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 96.31 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 96.22 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 96.21 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 96.19 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 96.12 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 96.05 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 96.02 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 95.93 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 95.87 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 95.84 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 95.82 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 95.7 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 95.69 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 95.67 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 95.64 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 95.57 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 95.51 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 95.5 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 95.29 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 95.13 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 94.99 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 94.96 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 94.14 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 93.65 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 93.64 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 93.35 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 93.26 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 93.19 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 92.99 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 92.84 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 92.7 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 92.66 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 92.63 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 92.51 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 92.05 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 92.05 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 92.02 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 91.81 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 91.57 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 91.57 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 91.3 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 91.22 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 90.91 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 90.7 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 90.65 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 90.44 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 90.25 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 89.9 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 89.87 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 89.56 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 89.54 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 89.39 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 88.73 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 88.11 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 87.06 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 86.38 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 85.05 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 85.02 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 84.36 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 84.02 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 84.0 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 83.91 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 83.7 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 83.37 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 83.33 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 83.02 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 82.78 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 82.33 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 82.28 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 82.25 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 81.68 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 81.62 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 81.42 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 80.76 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 80.65 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 80.56 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 80.41 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 80.16 |
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-107 Score=921.18 Aligned_cols=460 Identities=16% Similarity=0.285 Sum_probs=406.3
Q ss_pred CCeEEEEEcCCccceeecCCCCCe---EEeecCCchhHhhhccCCCCCceEEEEccCCCCCcchhh----hhHH--hhcc
Q 004314 60 QDRVIIVANQLPVKAKRRPDNKGW---SFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSEQD----DVSQ--LLLD 130 (761)
Q Consensus 60 ~~r~iivsnrlP~~~~~~~~~~~~---~~~~~~~~l~~~l~~~~~~~~~~~wvG~~~~~~~~~~~~----~v~~--~l~~ 130 (761)
+.++||||||||+.+++++++|.| .++.++|||+++|.+.+ +++||||++.+.+.+..+ .+.. ...+
T Consensus 2 ~~~livvsnR~P~~~~~~~~~g~~~~~~~~~s~GGLv~al~~~~----~~~Wvgw~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (496)
T 3t5t_A 2 GSEIFLASKRAAITYDTDPATGEPRAWLAPGGTGNVVAEQAGVL----NISWIASADSEDDRRASALNPDGVTMELHSGR 77 (496)
T ss_dssp --CEEEEESCCCEEEEECTTTCSEEEEECSSHHHHHHHHHHHHH----TCCEEEECCSHHHHHHHHHCTTCEEEECTTSC
T ss_pred CCCEEEEECCCCeeEEEecCCCceeeeeeccCCCchHHHHhhhc----CCEEEecCCCccchhhhhccccccccccccCC
Confidence 468999999999999987344776 67778899999998754 789999988643221110 1111 1357
Q ss_pred CeeEEEeecChhhhhhhhhccccccccccccccccC--CCCCCCccChHhHHHHHHHHHHHHHHHHHHhCC-CCCEEEEe
Q 004314 131 RFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPF--SATHGGRFDRSLWEAYVSANKIFSQRVIEVINP-EDDYVWIH 207 (761)
Q Consensus 131 ~~~~~pv~l~~~~~~~~y~gf~~~~LWpl~H~~~~~--~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~-~~DiVwvh 207 (761)
+|+|+||+|+++++++||+||||++|||+|||+++. .|+. .+|+++.|++|++||++||++|++.+++ ++|+||||
T Consensus 78 ~~~~~~v~l~~~~~~~~Y~gf~n~~LWPl~H~~~~~~~~p~~-~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~~~D~VwVh 156 (496)
T 3t5t_A 78 EILVRLIRHDPAVFRNVQNFMTANLMWAANNYGWDRWTQPSF-GSDAREGWADFGRFTRDFADAILKSSAQSADPVYLVH 156 (496)
T ss_dssp EEEEEEECCCHHHHHHHHHHHSTTTHHHHHTTCCCSSSCCCB-CHHHHHHHHHHHHHHHHHHHHHHHHTTTCSSCEEEEE
T ss_pred CeEEEEEeCCHHHHHHHHHHhHhhhcchhhccccccCCCCcc-chhhHHHHHHHHHHHHHHHHHHHHHhccCCCCEEEEe
Confidence 899999999999999999999999999999998543 3433 3566789999999999999999999952 46999999
Q ss_pred CCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCc--chHHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhc-Cceee
Q 004314 208 DYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLP--VREEILKALLNADLIGFHTFDYARHFLSCCSRML-GLEYQ 284 (761)
Q Consensus 208 Dyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp--~r~~il~~ll~~DligF~t~~~~~~Fl~~~~r~l-g~~~~ 284 (761)
|||||+||+|||+++|+++||||||||||++|+|++|| ||++||++||+||+|||||++|++||++||+|++ |.+..
T Consensus 157 DYhL~llp~~lR~~~~~~~igfFlHiPfPs~e~f~~Lp~~~r~ell~gll~~DligF~t~~y~~~Fl~~~~r~l~g~~~~ 236 (496)
T 3t5t_A 157 DYQLVGVPALLREQRPDAPILLFVHIPWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLESVADLLPDARID 236 (496)
T ss_dssp SGGGTTHHHHHHHHCTTSCEEEECCSCCCCHHHHTTSCHHHHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHCTTCEEE
T ss_pred CccHhHHHHHHHhhCCCCeEEEEEcCCCCCHHHHhhCcHhHHHHHHHHHHhCCEEEEecHHHHHHHHHHHHHHhcCCccc
Confidence 99999999999999999999999999999999999999 7999999999999999999999999999999999 98776
Q ss_pred ccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHHHHHHHHHHh
Q 004314 285 SKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQ 364 (761)
Q Consensus 285 ~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~ 364 (761)
...+ .+.++|++++|.++|+|||++.|.+... ++ .+++|++++++++|++|||+|+.|||..+|+|| +|+++
T Consensus 237 ~~~~--~v~~~gr~v~v~viP~GID~~~f~~~~~--~~---~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Af-~ll~~ 308 (496)
T 3t5t_A 237 REAM--TVEWRGHRTRLRTMPLGYSPLTLDGRNP--QL---PEGIEEWADGHRLVVHSGRTDPIKNAERAVRAF-VLAAR 308 (496)
T ss_dssp TTTT--EEEETTEEEEEEECCCCBCGGGC----C--CC---CTTHHHHHTTSEEEEEEEESSGGGCHHHHHHHH-HHHHH
T ss_pred ccCC--eEEECCEEEEEEEeccEeCHHHhchhhH--HH---HHHHHHHhCCceEEEEcccCccccCHHHHHHHH-HHHHh
Confidence 5555 5889999999999999999999987543 11 156788888999999999999999999999999 99999
Q ss_pred CCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccC
Q 004314 365 HPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDG 444 (761)
Q Consensus 365 ~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG 444 (761)
+|+++ +++|||||.|+|+++++|+++++++++++++||.+||+. ||+|++ .++.+++.++|++|||||+||++||
T Consensus 309 ~P~~~-~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~---~V~f~g-~v~~~el~aly~~ADv~vv~SlrEG 383 (496)
T 3t5t_A 309 GGGLE-KTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSD---TVRIDN-DNDVNHTIACFRRADLLIFNSTVDG 383 (496)
T ss_dssp TSSCT-TEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTT---SEEEEE-CCCHHHHHHHHHHCSEEEECCSSBS
T ss_pred Ccccc-eEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCc---CEEEeC-CCCHHHHHHHHHhccEEEECccccc
Confidence 99999 999999999999999999999999999999999999875 788774 7899999999999999999999999
Q ss_pred CCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc-CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHH
Q 004314 445 MNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEK 523 (761)
Q Consensus 445 mnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~ 523 (761)
||||++|||||+. ++||+|+|+|+|++++|. +|++|||||++++|+||.++|+||++||+.|+++
T Consensus 384 fgLv~~EamA~~~--------------~~g~lVlSe~aGa~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~ 449 (496)
T 3t5t_A 384 QNLSTFEAPLVNE--------------RDADVILSETCGAAEVLGEYCRSVNPFDLVEQAEAISAALAAGPRQRAEAAAR 449 (496)
T ss_dssp CCSHHHHHHHHCS--------------SCCEEEEETTBTTHHHHGGGSEEECTTBHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred CChhHHHHHHhCC--------------CCCCEEEeCCCCCHHHhCCCEEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 9999999999963 368999999999999994 7999999999999999999999999999999999
Q ss_pred HhhHHhhCCHHHHHHHHHHHHHHHHHhh
Q 004314 524 HYRYVSTHDVAYWARSFFQDMERTCKDH 551 (761)
Q Consensus 524 ~~~~v~~~~~~~Wa~~~l~~l~~~~~~~ 551 (761)
++++|++||+.+|+++|+++|..+...+
T Consensus 450 ~~~~V~~~d~~~W~~~fl~~L~~~~~~~ 477 (496)
T 3t5t_A 450 RRDAARPWTLEAWVQAQLDGLAADHAAR 477 (496)
T ss_dssp HHHHHTTCBHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHCCHHHHHHHHHHHHhhcccch
Confidence 9999999999999999999999875543
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-93 Score=810.54 Aligned_cols=453 Identities=27% Similarity=0.536 Sum_probs=412.9
Q ss_pred CeEEEEEcCCccceeecCCCCCeEEeecCCchhHhhhccCCCCCceEEEEccCCCCCcchhhhhHHhhccCeeEEEeecC
Q 004314 61 DRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSEQDDVSQLLLDRFKCVPAFLP 140 (761)
Q Consensus 61 ~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvG~~~~~~~~~~~~~v~~~l~~~~~~~pv~l~ 140 (761)
+|+||||||||+... + +.+.|||+.+|.+.+. +.+++||||+|.. ++ +++.+.+.+.++|+|+||||+
T Consensus 2 ~~livvsnr~p~~~~-----~----~~~~ggl~~~l~~~~~-~~~~~wvgw~g~~-~~-~~~~~~~~~~~~~~~~~v~l~ 69 (482)
T 1uqt_A 2 SRLVVVSNRIAPPDE-----H----AASAGGLAVGILGALK-AAGGLWFGWSGET-GN-EDQPLKKVKKGNITWASFNLS 69 (482)
T ss_dssp CCEEEEEEECCCCC-------------CCCHHHHHHHHHHH-HHCEEEEEEEEEE-SC-CSSCCEEEEETTEEEEEEEEC
T ss_pred CCEEEEECCCCCCCC-----C----CcCCCcHHHHHHHHHh-hCCCEEEeCCCCC-Cc-ccchhhhhccCCceEEEEECC
Confidence 589999999999721 1 2467899999987664 5899999999865 22 333344455678999999999
Q ss_pred hhhhhhhhhccccccccccccccccCCCCCCCccChHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHH
Q 004314 141 PDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRR 220 (761)
Q Consensus 141 ~~~~~~~y~gf~~~~LWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~ 220 (761)
++++++||+||||++|||+|||+++. ..|++++|.+|+++|+.||+++.+.+++ +|+|||||||++++|.++|+
T Consensus 70 ~~~~~~~y~gf~~~~lWp~~H~~~~~-----~~~~~~~w~~y~~vN~~fa~~l~~~~~~-~DiV~vHdyhl~~l~~~lr~ 143 (482)
T 1uqt_A 70 EQDLDEYYNQFSNAVLWPAFHYRLDL-----VQFQRPAWDGYLRVNALLADKLLPLLQD-DDIIWIHDYHLLPFAHELRK 143 (482)
T ss_dssp HHHHHHHTTTHHHHTHHHHHTTCGGG-----CCCCHHHHHHHHHHHHHHHHHHGGGCCT-TCEEEEESGGGTTHHHHHHH
T ss_pred HHHHHHHHHHhhhhhccccccCcCCc-----cccCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEECchHHHHHHHHHH
Confidence 99999999999999999999999875 4799999999999999999999999986 59999999999999999999
Q ss_pred hcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEE
Q 004314 221 RFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVG 300 (761)
Q Consensus 221 ~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~ 300 (761)
+.++++|+||+|+|||++++|+++|++++|+++++++|++|||+++|+++|+++|+++++.+... ++ .+.++|+.++
T Consensus 144 ~~~~~~i~~~~H~pfp~~~~~~~lp~~~~il~~ll~~d~i~f~~~~~~~~f~~~~~~~l~~~~~~-~~--~~~~~g~~~~ 220 (482)
T 1uqt_A 144 RGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRS-AK--SHTAWGKAFR 220 (482)
T ss_dssp TTCCSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEET-TT--EEEETTEEEE
T ss_pred hCCCCcEEEEEcCCCCCHHHHhhCccHHHHHHhhhccCeEEEECHHHHHHHHHHHHHHhCCcccc-CC--eEEECCeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999987654 33 2678899999
Q ss_pred EEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecC
Q 004314 301 IKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANP 380 (761)
Q Consensus 301 i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p 380 (761)
|.++|+|||++.|.+....+++.+ ..++|++++++++|++|||+++.||+..+|+||++|++++|+++++++|||||.|
T Consensus 221 v~vip~GID~~~f~~~~~~~~~~~-~~~lr~~~~~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p 299 (482)
T 1uqt_A 221 TEVYPIGIEPKEIAKQAAGPLPPK-LAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPT 299 (482)
T ss_dssp EEECCCCCCHHHHHHHHHSCCCHH-HHHHHHHTTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCB
T ss_pred EEEEeccCCHHHHHHHhcCcchHH-HHHHHHHhCCCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEECC
Confidence 999999999999987655455544 6778999999999999999999999999999999999999999999999999999
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCC
Q 004314 381 ARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVS 460 (761)
Q Consensus 381 ~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~ 460 (761)
+|+++++|+++++++++++++||.+||..+|.||+|+.+.++++++.++|++|||||+||++||||||++||||||.+
T Consensus 300 ~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~-- 377 (482)
T 1uqt_A 300 SRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP-- 377 (482)
T ss_dssp CSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCT--
T ss_pred CccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999862
Q ss_pred CCCCCCCCCCCCCceEEEcCCCCCcccccCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHH
Q 004314 461 GSESSSESSAPKKSMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSF 540 (761)
Q Consensus 461 ~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~ 540 (761)
+++||||+|+++|+++++.+|++|||+|++++|+||.++|+|+++||+.|+++++++|.++|+.+|+++|
T Consensus 378 ----------~~~gpvV~S~~~G~~~~l~~g~lv~p~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~~s~~~~a~~~ 447 (482)
T 1uqt_A 378 ----------ANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECF 447 (482)
T ss_dssp ----------TSCCEEEEETTBGGGGTCTTSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred ----------CCCCCEEEECCCCCHHHhCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 2468999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 004314 541 FQDMERT 547 (761)
Q Consensus 541 l~~l~~~ 547 (761)
+++|+++
T Consensus 448 l~~l~~~ 454 (482)
T 1uqt_A 448 ISDLKQI 454 (482)
T ss_dssp HHHHHHS
T ss_pred HHHHHhc
Confidence 9999876
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=8.7e-26 Score=250.85 Aligned_cols=314 Identities=15% Similarity=0.168 Sum_probs=233.9
Q ss_pred HHHHHHHHHHHHHHHHHHh--CCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCch---hHHhcCcch------
Q 004314 179 WEAYVSANKIFSQRVIEVI--NPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSS---EIYRTLPVR------ 247 (761)
Q Consensus 179 w~~Y~~vN~~fa~~i~~~~--~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~---e~fr~lp~r------ 247 (761)
+..+....+...+.+...+ ...-|+|++|+++..+++.++++. .++|+.+++|..++.. ..+.....+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~-~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~ 177 (439)
T 3fro_A 99 IRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKY-FKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYP 177 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHH-HCCCEEEEESCCCCCCEEHHHHHHTTCGGGCCSS
T ss_pred hhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhc-cCCCEEEEecccccccCchHHhCccccccccccc
Confidence 3444444444444444432 122499999999998888888754 6889999999987531 112111111
Q ss_pred --HHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHH
Q 004314 248 --EEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWR 325 (761)
Q Consensus 248 --~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~ 325 (761)
...-..+..+|.|.+.+..+++.... .++. ...++.++|+|||.+.|.+....+.....
T Consensus 178 ~~~~~~~~~~~ad~ii~~S~~~~~~~~~----~~~~---------------~~~~i~vi~ngvd~~~~~~~~~~~~~~~~ 238 (439)
T 3fro_A 178 DIDPEHTGGYIADIVTTVSRGYLIDEWG----FFRN---------------FEGKITYVFNGIDCSFWNESYLTGSRDER 238 (439)
T ss_dssp EECHHHHHHHHCSEEEESCHHHHHHTHH----HHGG---------------GTTSEEECCCCCCTTTSCGGGSCSCHHHH
T ss_pred eeeHhhhhhhhccEEEecCHHHHHHHhh----hhhh---------------cCCceeecCCCCCchhcCcccccchhhhh
Confidence 22333455799999999988776332 1111 11257789999999999875322223444
Q ss_pred HHHHHHHc--CCCeEEEeecCcc-ccCChHHHHHHHHHHHHhC--CCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHH
Q 004314 326 VQELKQQF--EGKTVLLGVDDMD-IFKGVDLKLLAMEHLLKQH--PKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCK 400 (761)
Q Consensus 326 ~~~lr~~~--~~~~vil~VdRld-~~KGi~~~l~A~~~ll~~~--P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~ 400 (761)
...+++++ +++++|+++||+. +.||+..+++|++++.+++ |+++ |+++|. ++ ..+.++++++++
T Consensus 239 ~~~~~~~~~~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~----l~i~G~-----g~--~~~~~~l~~~~~ 307 (439)
T 3fro_A 239 KKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMR----FIIIGK-----GD--PELEGWARSLEE 307 (439)
T ss_dssp HHHHHHHHTCCSCEEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEE----EEEECC-----CC--HHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCcEEEEEcccccccccHHHHHHHHHHHHhcccCCCeE----EEEEcC-----CC--hhHHHHHHHHHh
Confidence 56677777 3459999999999 9999999999999998766 6654 888873 33 234466667766
Q ss_pred HHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcC
Q 004314 401 RINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSE 480 (761)
Q Consensus 401 ~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se 480 (761)
+.+ .++++.+.++.+++..+|+.||++|+||..||||++++||||||. |+|+|+
T Consensus 308 ~~~---------~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~-----------------Pvi~s~ 361 (439)
T 3fro_A 308 KHG---------NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGA-----------------IPIASA 361 (439)
T ss_dssp HCT---------TEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTTC-----------------EEEEES
T ss_pred hcC---------CEEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCCC-----------------CeEEcC
Confidence 643 366677889999999999999999999999999999999999976 999999
Q ss_pred CCCCccccc--CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHHHHHHHHH
Q 004314 481 FIGCSPSLS--GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERTCK 549 (761)
Q Consensus 481 ~~G~~~~l~--~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l~~~~~ 549 (761)
.+|..+.+. .|++++|.|++++|++|.+++++.++.++...++.+++++++++..+++++++-++++.+
T Consensus 362 ~~~~~e~~~~~~g~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 432 (439)
T 3fro_A 362 VGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSID 432 (439)
T ss_dssp STHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCSC
T ss_pred CCCcceeEEcCceEEeCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHH
Confidence 999888883 599999999999999999999955557777778889999999999999999988876543
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.5e-24 Score=247.12 Aligned_cols=294 Identities=15% Similarity=0.168 Sum_probs=201.5
Q ss_pred CCEEEEeCCccchHHHHHHHhc------CCCeEEEEEecC-----CCchhHHh-cCcch--------------------H
Q 004314 201 DDYVWIHDYHLMVLPTFLRRRF------TRLRMGFFLHSP-----FPSSEIYR-TLPVR--------------------E 248 (761)
Q Consensus 201 ~DiVwvhDyhl~llp~~lr~~~------~~~~ig~flH~P-----fP~~e~fr-~lp~r--------------------~ 248 (761)
+||+++||+|..++|.+++... .++++.|+.|.. ||....-. .+|.. .
T Consensus 154 ddIiH~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 233 (536)
T 3vue_A 154 DVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKIN 233 (536)
T ss_dssp CEEEEEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEEEE
T ss_pred CEEEEECcchHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccccchh
Confidence 4799999999999999998765 368999999975 22111100 01110 1
Q ss_pred HHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhcc---------
Q 004314 249 EILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRL--------- 319 (761)
Q Consensus 249 ~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~--------- 319 (761)
-+-.++..||.|..-++.|++..++.-. .|.. +....+..+|.++|||||.+.|.+....
T Consensus 234 ~~k~~i~~ad~v~tVS~~~a~ei~~~~~--~g~~---------l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~ 302 (536)
T 3vue_A 234 WMKAGILEADRVLTVSPYYAEELISGIA--RGCE---------LDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDAT 302 (536)
T ss_dssp HHHHHHHHCSEEEESCHHHHHHHHTTCC--CCSS---------SCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTT
T ss_pred HHHHHHHhccEEEEcCHHHhhhhhcccc--cccc---------cccccccCCeEEEECCcchhhcCCCCccccccccchh
Confidence 2345678899999999999887654210 1110 1112244568899999999998763210
Q ss_pred ---chHHHHHHHHHHHc-----CCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHH
Q 004314 320 ---ADKDWRVQELKQQF-----EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEI 391 (761)
Q Consensus 320 ---~~~~~~~~~lr~~~-----~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l 391 (761)
.........+++++ ++.++|++|||+++.||+..+++|+.+++++++ .|+++|. |+. +.
T Consensus 303 ~~~~~K~~~k~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~------~l~l~G~-----G~~--~~ 369 (536)
T 3vue_A 303 TAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDV------QIVLLGT-----GKK--KF 369 (536)
T ss_dssp THHHHHHHHHHHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTSSC------EEEEECC-----BCH--HH
T ss_pred hhhhhhHHHHHHHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhhCC------eEEEEec-----cCc--hH
Confidence 01112234455555 467899999999999999999999999976543 2555653 221 22
Q ss_pred HHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCC
Q 004314 392 QAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAP 471 (761)
Q Consensus 392 ~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~ 471 (761)
...++.++...+. .|.+. +..+.+++..+|+.||+||+||.+||||++++|||+||.
T Consensus 370 ~~~~~~~~~~~~~--------~v~~~-~~~~~~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G~-------------- 426 (536)
T 3vue_A 370 EKLLKSMEEKYPG--------KVRAV-VKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGT-------------- 426 (536)
T ss_dssp HHHHHHHHHHSTT--------TEEEE-CSCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHTTC--------------
T ss_pred HHHHHHHHhhcCC--------ceEEE-EeccHHHHHHHHHhhheeecccccCCCCHHHHHHHHcCC--------------
Confidence 3344444444331 35544 467899999999999999999999999999999999976
Q ss_pred CCceEEEcCCCCCccccc---CcE----------EECCCCHHHHHHHHHHHHcCCH-HHHHHHHHHHhhHHhhCCHHHHH
Q 004314 472 KKSMLVVSEFIGCSPSLS---GAI----------RVNPWNIEATAEAMHEAIQMNE-AEKQLRHEKHYRYVSTHDVAYWA 537 (761)
Q Consensus 472 ~~g~lV~Se~~G~~~~l~---~al----------~VnP~d~~~~A~ai~~aL~m~~-~er~~r~~~~~~~v~~~~~~~Wa 537 (761)
|+|+|+.+|+.+.+. +|+ +|+|.|++++|++|.++|..-. ++++++.++.. -++++|.+=|
T Consensus 427 ---PvI~s~~gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~~~~~~~~~~~~am--~~~fSW~~~A 501 (536)
T 3vue_A 427 ---PCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGTPAYEEMVRNCM--NQDLSWKGPA 501 (536)
T ss_dssp ---CEEECSCTHHHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHH--HSCCSSHHHH
T ss_pred ---CEEEcCCCCchheeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHHhcCcHHHHHHHHHHH--HhcCCHHHHH
Confidence 999999999999883 244 7899999999999999986322 22222222221 2457888778
Q ss_pred HHHHHHHHH
Q 004314 538 RSFFQDMER 546 (761)
Q Consensus 538 ~~~l~~l~~ 546 (761)
++|++-+.+
T Consensus 502 ~~y~~ly~~ 510 (536)
T 3vue_A 502 KNWENVLLG 510 (536)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 887766554
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.4e-24 Score=244.29 Aligned_cols=303 Identities=15% Similarity=0.062 Sum_probs=214.2
Q ss_pred CEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhH------------HhcCc--chHHH-HHHhhhcCEEeeeCHH
Q 004314 202 DYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEI------------YRTLP--VREEI-LKALLNADLIGFHTFD 266 (761)
Q Consensus 202 DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~------------fr~lp--~r~~i-l~~ll~~DligF~t~~ 266 (761)
|+||+|+++..+++.++.+. .++|+.+++|..++...- .+... .+..+ ...+-.+|.|.+.+..
T Consensus 122 Divh~~~~~~~~~~~~~~~~-~~~p~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~ 200 (499)
T 2r60_A 122 QVVTTHYGDGGLAGVLLKNI-KGLPFTFTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQ 200 (499)
T ss_dssp SEEEEEHHHHHHHHHHHHHH-HCCCEEEECSSCHHHHHHTTCCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHH
T ss_pred CEEEEcCCcchHHHHHHHHh-cCCcEEEEccCcccccchhhccCCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECCHH
Confidence 89999998766666666554 368899999987542210 00000 01111 1224568999988886
Q ss_pred HHHHHHHHHhhhcC-ceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc--------CCCe
Q 004314 267 YARHFLSCCSRMLG-LEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF--------EGKT 337 (761)
Q Consensus 267 ~~~~Fl~~~~r~lg-~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~--------~~~~ 337 (761)
.++.+.+. ..+| ... . ....++.++|+|||.+.|.+... .+....+++++ .+++
T Consensus 201 ~~~~~~~~--~~~g~~~~-~----------~~~~ki~vi~ngvd~~~~~~~~~----~~~~~~~r~~~~~~~~~~~~~~~ 263 (499)
T 2r60_A 201 ERFGQYSH--DLYRGAVN-V----------EDDDKFSVIPPGVNTRVFDGEYG----DKIKAKITKYLERDLGSERMELP 263 (499)
T ss_dssp HHHHTTTS--GGGTTTCC-T----------TCGGGEEECCCCBCTTTSSSCCC----HHHHHHHHHHHHHHSCGGGTTSC
T ss_pred HHHHHHhh--hccccccc-c----------cCCCCeEEECCCcChhhcCccch----hhhHHHHHHHhcccccccCCCCc
Confidence 66554320 0012 100 0 01125778999999998865321 11223445543 3778
Q ss_pred EEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCc-------hhHHHHHHHHHHHHHHHhcccCCCC
Q 004314 338 VLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRG-------KDLEEIQAEIHATCKRINETFGRPG 410 (761)
Q Consensus 338 vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~-------~~~~~l~~ev~~lv~~in~~~g~~~ 410 (761)
+|+++||+++.||+..+++|+.++.+++|+. +.|+++|... +.. ....++.+++++++++.+..
T Consensus 264 ~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~---~~l~i~G~~~-~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~----- 334 (499)
T 2r60_A 264 AIIASSRLDQKKNHYGLVEAYVQNKELQDKA---NLVLTLRGIE-NPFEDYSRAGQEEKEILGKIIELIDNNDCR----- 334 (499)
T ss_dssp EEEECSCCCGGGCHHHHHHHHHTCHHHHHHC---EEEEEESSCS-BTTTBCTTSCHHHHHHHHHHHHHHHHTTCB-----
T ss_pred EEEEeecCccccCHHHHHHHHHHHHHhCCCc---eEEEEECCCC-CcccccccccccchHHHHHHHHHHHhcCCC-----
Confidence 9999999999999999999999998776642 3466666411 110 11234467777887776522
Q ss_pred CccEEEEcCCCCHHHHHHHHHhc----ccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcc
Q 004314 411 YEPVVFIDKPVTLSERAAYYTIA----ECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSP 486 (761)
Q Consensus 411 ~~pV~~~~~~v~~~el~aly~~A----Dv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~ 486 (761)
..|+|+ |.++.+++..+|+.| |++|+||..||||++++|||+||. |+|+|+.+|..+
T Consensus 335 -~~V~~~-G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~-----------------PvI~s~~~g~~e 395 (499)
T 2r60_A 335 -GKVSMF-PLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGL-----------------PAVVTRNGGPAE 395 (499)
T ss_dssp -TTEEEE-ECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTC-----------------CEEEESSBHHHH
T ss_pred -ceEEEC-CCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCC-----------------CEEEecCCCHHH
Confidence 136655 689999999999999 999999999999999999999976 999999988888
Q ss_pred ccc---CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhh-CCHHHHHHHHHHHHHHHHHhh
Q 004314 487 SLS---GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVST-HDVAYWARSFFQDMERTCKDH 551 (761)
Q Consensus 487 ~l~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~Wa~~~l~~l~~~~~~~ 551 (761)
.+. .|++|+|.|++++|++|.++++.+ +.++...++.++++.+ +++...++++++.++++....
T Consensus 396 ~v~~~~~g~l~~~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~~ 463 (499)
T 2r60_A 396 ILDGGKYGVLVDPEDPEDIARGLLKAFESE-ETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADRK 463 (499)
T ss_dssp HTGGGTSSEEECTTCHHHHHHHHHHHHSCH-HHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC-
T ss_pred HhcCCceEEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhh
Confidence 884 389999999999999999999954 4566667778888877 999999999999998876554
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4.3e-23 Score=226.07 Aligned_cols=287 Identities=13% Similarity=0.179 Sum_probs=212.5
Q ss_pred HHHHhCCCCCEEEEeCCccch-HHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHH-hhhcCEEeeeCHHHHHH
Q 004314 193 VIEVINPEDDYVWIHDYHLMV-LPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKA-LLNADLIGFHTFDYARH 270 (761)
Q Consensus 193 i~~~~~~~~DiVwvhDyhl~l-lp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~-ll~~DligF~t~~~~~~ 270 (761)
+++..++ |+||+|+...+. +...+++ ....++.+..|...+ .+...+....+++. +-.+|.|.+.+....+.
T Consensus 81 ~~~~~~~--Dvv~~~~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~---~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~ 154 (394)
T 3okp_A 81 IIREREI--DNVWFGAAAPLALMAGTAKQ-AGASKVIASTHGHEV---GWSMLPGSRQSLRKIGTEVDVLTYISQYTLRR 154 (394)
T ss_dssp HHHHTTC--SEEEESSCTTGGGGHHHHHH-TTCSEEEEECCSTHH---HHTTSHHHHHHHHHHHHHCSEEEESCHHHHHH
T ss_pred HHHhcCC--CEEEECCcchHHHHHHHHHh-cCCCcEEEEeccchh---hhhhcchhhHHHHHHHHhCCEEEEcCHHHHHH
Confidence 3444455 899999876553 4444443 333358889996532 12223333444443 45789999999877776
Q ss_pred HHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc---CCCeEEEeecCccc
Q 004314 271 FLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDI 347 (761)
Q Consensus 271 Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~ 347 (761)
+.+. .+. ..++.++|+|||.+.|.+.. ......+++++ +++++|+++||+++
T Consensus 155 ~~~~----~~~----------------~~~~~vi~ngv~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~G~~~~ 209 (394)
T 3okp_A 155 FKSA----FGS----------------HPTFEHLPSGVDVKRFTPAT-----PEDKSATRKKLGFTDTTPVIACNSRLVP 209 (394)
T ss_dssp HHHH----HCS----------------SSEEEECCCCBCTTTSCCCC-----HHHHHHHHHHTTCCTTCCEEEEESCSCG
T ss_pred HHHh----cCC----------------CCCeEEecCCcCHHHcCCCC-----chhhHHHHHhcCCCcCceEEEEEecccc
Confidence 6531 121 12678899999999886521 12235567776 35589999999999
Q ss_pred cCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHH
Q 004314 348 FKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERA 427 (761)
Q Consensus 348 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~ 427 (761)
.||+..+++|++++.+++|+++ |+++|. ++..+. +++++..++ ..|+++ +.++.+++.
T Consensus 210 ~Kg~~~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~~----l~~~~~~~~--------~~v~~~-g~~~~~~~~ 267 (394)
T 3okp_A 210 RKGQDSLIKAMPQVIAARPDAQ----LLIVGS-----GRYEST----LRRLATDVS--------QNVKFL-GRLEYQDMI 267 (394)
T ss_dssp GGCHHHHHHHHHHHHHHSTTCE----EEEECC-----CTTHHH----HHHHTGGGG--------GGEEEE-ESCCHHHHH
T ss_pred ccCHHHHHHHHHHHHhhCCCeE----EEEEcC-----chHHHH----HHHHHhccc--------CeEEEc-CCCCHHHHH
Confidence 9999999999999999998876 887773 344333 344432222 246655 579999999
Q ss_pred HHHHhcccceecccc-------cCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc--CcEEECCCC
Q 004314 428 AYYTIAECVVVTAVR-------DGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS--GAIRVNPWN 498 (761)
Q Consensus 428 aly~~ADv~vvtS~~-------EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~al~VnP~d 498 (761)
.+|+.||++|+||.. ||||++++|||+||. |+|+|+.+|..+.+. .|++++|.|
T Consensus 268 ~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~-----------------PvI~~~~~~~~e~i~~~~g~~~~~~d 330 (394)
T 3okp_A 268 NTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGV-----------------PVIAGTSGGAPETVTPATGLVVEGSD 330 (394)
T ss_dssp HHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTTC-----------------CEEECSSTTGGGGCCTTTEEECCTTC
T ss_pred HHHHhCCEEEecCccccccccccccCcHHHHHHHcCC-----------------CEEEeCCCChHHHHhcCCceEeCCCC
Confidence 999999999999999 999999999999976 999999999888884 589999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhh-CCHHHHHHHHHHHHHHHHHh
Q 004314 499 IEATAEAMHEAIQMNEAEKQLRHEKHYRYVST-HDVAYWARSFFQDMERTCKD 550 (761)
Q Consensus 499 ~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~Wa~~~l~~l~~~~~~ 550 (761)
++++|++|.++++.+ ++++...++.++++.+ +++..+++++++.+++....
T Consensus 331 ~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~r~ 382 (394)
T 3okp_A 331 VDKLSELLIELLDDP-IRRAAMGAAGRAHVEAEWSWEIMGERLTNILQSEPRK 382 (394)
T ss_dssp HHHHHHHHHHHHTCH-HHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHSCCC-
T ss_pred HHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhccC
Confidence 999999999999954 4666677778888875 89999999999988865443
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1e-22 Score=230.90 Aligned_cols=300 Identities=18% Similarity=0.122 Sum_probs=208.0
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCch----hHHhc--Cc-------------chHHHHHHhhhcCEEe
Q 004314 201 DDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSS----EIYRT--LP-------------VREEILKALLNADLIG 261 (761)
Q Consensus 201 ~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~----e~fr~--lp-------------~r~~il~~ll~~Dlig 261 (761)
-|+|++|+++..+++.+++.+..++|+++++|..++.. ..+.. ++ ...-.-..+..+|.|.
T Consensus 130 ~Divh~~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi 209 (485)
T 2qzs_A 130 PDVVHAHDWHAGLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHIT 209 (485)
T ss_dssp CSEEEEETGGGTTHHHHHHHTTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEEE
T ss_pred CCEEEeeccchhHHHHHHhhccCCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHhcCeEE
Confidence 49999999998888888774456899999999875421 11111 01 0011223345789999
Q ss_pred eeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeE--EEEEEeccccCcccchhhhcc-----------chHHHHHHH
Q 004314 262 FHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRT--VGIKIMPVGIHMGQIESVLRL-----------ADKDWRVQE 328 (761)
Q Consensus 262 F~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~--~~i~v~P~GId~~~f~~~~~~-----------~~~~~~~~~ 328 (761)
..+....+.+.+. ..|..... . ...+. .++.++|+|||.+.|.+.... +........
T Consensus 210 ~~S~~~~~~~~~~---~~~~~~~~---~----~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (485)
T 2qzs_A 210 AVSPTYAREITEP---QFAYGMEG---L----LQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQ 279 (485)
T ss_dssp ESSHHHHHHTTSH---HHHTTCHH---H----HHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHH
T ss_pred ecCHHHHHHHhcc---ccCcchHH---H----HHhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHH
Confidence 9988776655321 01100000 0 00001 257789999999988754210 011122345
Q ss_pred HHHHcC-----CCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHh
Q 004314 329 LKQQFE-----GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRIN 403 (761)
Q Consensus 329 lr~~~~-----~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in 403 (761)
+++++. ++++|+++||+++.||+..+++|++++.+ ++ +.|+++|. ++ .++++++++++.+.+
T Consensus 280 ~r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~----~~l~ivG~-----g~--~~~~~~l~~~~~~~~ 346 (485)
T 2qzs_A 280 LQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE--QG----GQLALLGA-----GD--PVLQEGFLAAAAEYP 346 (485)
T ss_dssp HHHHHTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH--TT----CEEEEEEE-----EC--HHHHHHHHHHHHHST
T ss_pred HHHHcCCCCCCCCeEEEEeccCccccCHHHHHHHHHHHhh--CC----cEEEEEeC-----Cc--hHHHHHHHHHHHhCC
Confidence 666662 67899999999999999999999999876 34 44888874 32 134566777776643
Q ss_pred cccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCC
Q 004314 404 ETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIG 483 (761)
Q Consensus 404 ~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G 483 (761)
..|+++.+. +.+++..+|+.||++|+||..||||++++||||||. |+|+|+.+|
T Consensus 347 --------~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~g~~~lEAma~G~-----------------PvI~s~~gg 400 (485)
T 2qzs_A 347 --------GQVGVQIGY-HEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGT-----------------LPLVRRTGG 400 (485)
T ss_dssp --------TTEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTC-----------------EEEEESSHH
T ss_pred --------CcEEEeCCC-CHHHHHHHHHhCCEEEECCccCCCcHHHHHHHHCCC-----------------CEEECCCCC
Confidence 247756665 788889999999999999999999999999999976 999999999
Q ss_pred Cccccc------------CcEEECCCCHHHHHHHHHHHHc--CCHHHHHHHHHHHhhHHhhCCHHHHHHHHHHHHHHHHH
Q 004314 484 CSPSLS------------GAIRVNPWNIEATAEAMHEAIQ--MNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERTCK 549 (761)
Q Consensus 484 ~~~~l~------------~al~VnP~d~~~~A~ai~~aL~--m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l~~~~~ 549 (761)
..+.+. .|++++|.|++++|++|.+++. ..++.++.+.++.++ +.+++...++++++-+++...
T Consensus 401 ~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~ly~~~~~ 478 (485)
T 2qzs_A 401 LADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMA--MDFSWQVAAKSYRELYYRLKL 478 (485)
T ss_dssp HHHHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHHHHTSHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHHHC-
T ss_pred ccceeccCccccccccccceEEECCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh--hcCCHHHHHHHHHHHHHHhhh
Confidence 888873 4899999999999999999994 234444444444443 788999999999988877654
Q ss_pred hh
Q 004314 550 DH 551 (761)
Q Consensus 550 ~~ 551 (761)
++
T Consensus 479 ~~ 480 (485)
T 2qzs_A 479 EH 480 (485)
T ss_dssp --
T ss_pred hh
Confidence 43
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=4.8e-23 Score=229.89 Aligned_cols=294 Identities=14% Similarity=0.148 Sum_probs=212.6
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhH-Hhc--C--c-chHHHHH-HhhhcCEEeeeCHHHHHHHHH
Q 004314 201 DDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEI-YRT--L--P-VREEILK-ALLNADLIGFHTFDYARHFLS 273 (761)
Q Consensus 201 ~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~-fr~--l--p-~r~~il~-~ll~~DligF~t~~~~~~Fl~ 273 (761)
-|+|++|++...+++.++.+. .++|+.+++|..++.... +.. . + .+..+.+ .+-.+|.|.+.+....+.+.+
T Consensus 123 ~Div~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~ 201 (438)
T 3c48_A 123 YDLIHSHYWLSGQVGWLLRDL-WRIPLIHTAHTLAAVKNSYRDDSDTPESEARRICEQQLVDNADVLAVNTQEEMQDLMH 201 (438)
T ss_dssp CSEEEEEHHHHHHHHHHHHHH-HTCCEEEECSSCHHHHSCC----CCHHHHHHHHHHHHHHHHCSEEEESSHHHHHHHHH
T ss_pred CCEEEeCCccHHHHHHHHHHH-cCCCEEEEecCCcccccccccccCCcchHHHHHHHHHHHhcCCEEEEcCHHHHHHHHH
Confidence 389999987665555555554 478999999987542110 000 0 1 1111212 234689999999877776653
Q ss_pred HHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc---CCCeEEEeecCccccCC
Q 004314 274 CCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIFKG 350 (761)
Q Consensus 274 ~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KG 350 (761)
.+|.. ..++.++|+|||.+.|.+... .....+++++ .++++|+++||+.+.||
T Consensus 202 ----~~g~~---------------~~k~~vi~ngvd~~~~~~~~~-----~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg 257 (438)
T 3c48_A 202 ----HYDAD---------------PDRISVVSPGADVELYSPGND-----RATERSRRELGIPLHTKVVAFVGRLQPFKG 257 (438)
T ss_dssp ----HHCCC---------------GGGEEECCCCCCTTTSCCC---------CHHHHHHTTCCSSSEEEEEESCBSGGGC
T ss_pred ----HhCCC---------------hhheEEecCCccccccCCccc-----chhhhhHHhcCCCCCCcEEEEEeeecccCC
Confidence 12321 124678999999988865311 1122356665 46889999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHH
Q 004314 351 VDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYY 430 (761)
Q Consensus 351 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly 430 (761)
+..+++|++++.+++|+. ++.|+++|.+.. .++ ..+++++++++.+.. ..|.++ +.++.+++..+|
T Consensus 258 ~~~li~a~~~l~~~~p~~--~~~l~i~G~~~~-~g~----~~~~l~~~~~~~~l~------~~v~~~-g~~~~~~~~~~~ 323 (438)
T 3c48_A 258 PQVLIKAVAALFDRDPDR--NLRVIICGGPSG-PNA----TPDTYRHMAEELGVE------KRIRFL-DPRPPSELVAVY 323 (438)
T ss_dssp HHHHHHHHHHHHHHCTTC--SEEEEEECCBC-----------CHHHHHHHHTTCT------TTEEEE-CCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCc--ceEEEEEeCCCC-CCc----HHHHHHHHHHHcCCC------CcEEEc-CCCChHHHHHHH
Confidence 999999999999998842 355888885321 122 234555666554421 136654 689999999999
Q ss_pred HhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCHHHHHHHHH
Q 004314 431 TIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMH 507 (761)
Q Consensus 431 ~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~ 507 (761)
+.||++|+||..||||++++|||+||. |+|+|+.+|..+.+. .|++++|.|++++|++|.
T Consensus 324 ~~adv~v~ps~~e~~~~~~~Eama~G~-----------------PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~ 386 (438)
T 3c48_A 324 RAADIVAVPSFNESFGLVAMEAQASGT-----------------PVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALA 386 (438)
T ss_dssp HHCSEEEECCSCCSSCHHHHHHHHTTC-----------------CEEEESCTTHHHHSCBTTTEEEESSCCHHHHHHHHH
T ss_pred HhCCEEEECccccCCchHHHHHHHcCC-----------------CEEecCCCChhHHhhCCCcEEECCCCCHHHHHHHHH
Confidence 999999999999999999999999976 999999999888884 389999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHHHHHHHHHhh
Q 004314 508 EAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERTCKDH 551 (761)
Q Consensus 508 ~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l~~~~~~~ 551 (761)
++++.+ +.++...++.++++.++++...++++++.++++....
T Consensus 387 ~l~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 429 (438)
T 3c48_A 387 TLLDDD-ETRIRMGEDAVEHARTFSWAATAAQLSSLYNDAIANE 429 (438)
T ss_dssp HHHHCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHcCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhc
Confidence 999954 4566666778888888999999999999988876543
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.1e-23 Score=231.60 Aligned_cols=300 Identities=17% Similarity=0.172 Sum_probs=206.8
Q ss_pred hHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhh
Q 004314 176 RSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALL 255 (761)
Q Consensus 176 ~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll 255 (761)
...|..|....+.+++.+ +..++ |+|++|+++...+..++++ ..|+.+++|..++.... .....+.+.+.
T Consensus 105 ~~~~~~~~~~~~~~~~~l-~~~~~--Dvv~~~~~~~~~~~~~~~~---~~p~v~~~h~~~~~~~~----~~~~~~~~~~~ 174 (416)
T 2x6q_A 105 EEMKELYLNVNRENSKFI-DLSSF--DYVLVHDPQPAALIEFYEK---KSPWLWRCHIDLSSPNR----EFWEFLRRFVE 174 (416)
T ss_dssp HHHHHHHHHHHHHHHHSS-CGGGS--SEEEEESSTTGGGGGGSCC---CSCEEEECCSCCSSCCH----HHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHH-hhcCC--CEEEEeccchhhHHHHHHh---cCCEEEEEccccCCccH----HHHHHHHHHHH
Confidence 334555554444433332 22344 8999999987766555543 27899999988754210 00111122233
Q ss_pred hcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc--
Q 004314 256 NADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF-- 333 (761)
Q Consensus 256 ~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~-- 333 (761)
.+|.+.+.+.++.+. + +.. .++.++|+|||+..+.+.... ......+++++
T Consensus 175 ~~~~~i~~~s~~~~~-----------------~-----~~~--~~~~vi~ngvd~~~~~~~~~~---~~~~~~~r~~~~~ 227 (416)
T 2x6q_A 175 KYDRYIFHLPEYVQP-----------------E-----LDR--NKAVIMPPSIDPLSEKNVELK---QTEILRILERFDV 227 (416)
T ss_dssp TSSEEEESSGGGSCT-----------------T-----SCT--TTEEECCCCBCTTSTTTSCCC---HHHHHHHHHHTTC
T ss_pred hCCEEEEechHHHHh-----------------h-----CCc--cceEEeCCCCChhhhcccccC---hhhHHHHHHHhCC
Confidence 455554433222111 0 011 246689999998777542111 22345567766
Q ss_pred -CCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCc
Q 004314 334 -EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYE 412 (761)
Q Consensus 334 -~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~ 412 (761)
+++++|+++||+++.||+..+++|+..+.+++|+++ |+++|.... .. .+..+.+++++++.+.. .
T Consensus 228 ~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~----l~i~G~g~~-~~---~~~~~~l~~~~~~~~~~------~ 293 (416)
T 2x6q_A 228 DPEKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQ----LLLVGVMAH-DD---PEGWIYFEKTLRKIGED------Y 293 (416)
T ss_dssp CTTSCEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCE----EEEEECCCT-TC---HHHHHHHHHHHHHHTTC------T
T ss_pred CCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeE----EEEEecCcc-cc---hhHHHHHHHHHHHhCCC------C
Confidence 467899999999999999999999999999999876 888884321 11 22344556666665431 2
Q ss_pred cEEEEc--CCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc-
Q 004314 413 PVVFID--KPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS- 489 (761)
Q Consensus 413 pV~~~~--~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~- 489 (761)
.|.|++ ..++.+++..+|+.||++|+||..||||++++|||+||. |+|+|+.+|..+.+.
T Consensus 294 ~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~G~-----------------PvI~~~~~g~~e~i~~ 356 (416)
T 2x6q_A 294 DVKVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWKGK-----------------PVIGRAVGGIKFQIVD 356 (416)
T ss_dssp TEEEEEGGGTCCHHHHHHHHHHCSEEEECCSSCSSCHHHHHHHHTTC-----------------CEEEESCHHHHHHCCB
T ss_pred cEEEecccCCCCHHHHHHHHHhCCEEEECCCcCCCccHHHHHHHcCC-----------------CEEEccCCCChhheec
Confidence 477664 255688999999999999999999999999999999976 999999988888883
Q ss_pred --CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHh-hCCHHHHHHHHHHHHHH
Q 004314 490 --GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVS-THDVAYWARSFFQDMER 546 (761)
Q Consensus 490 --~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~Wa~~~l~~l~~ 546 (761)
.|++++ |++++|++|.++++.+ ++++...++.++++. .+++...++.+++-+++
T Consensus 357 ~~~g~l~~--d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~ 413 (416)
T 2x6q_A 357 GETGFLVR--DANEAVEVVLYLLKHP-EVSKEMGAKAKERVRKNFIITKHMERYLDILNS 413 (416)
T ss_dssp TTTEEEES--SHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHT
T ss_pred CCCeEEEC--CHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 488887 9999999999999954 456666677788886 68999999988877654
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=99.90 E-value=7.2e-23 Score=232.16 Aligned_cols=298 Identities=14% Similarity=0.175 Sum_probs=207.4
Q ss_pred CCEEEEeCCccchHHHHHHHh-cCCCeEEEEEecCCCch----hHHhc--Ccc-------------hHHHHHHhhhcCEE
Q 004314 201 DDYVWIHDYHLMVLPTFLRRR-FTRLRMGFFLHSPFPSS----EIYRT--LPV-------------REEILKALLNADLI 260 (761)
Q Consensus 201 ~DiVwvhDyhl~llp~~lr~~-~~~~~ig~flH~PfP~~----e~fr~--lp~-------------r~~il~~ll~~Dli 260 (761)
-|+|++|+++..+++.++++. ..++|+++++|..++.. ..+.. +|. ..-.-..+..+|.|
T Consensus 131 ~DiIh~~~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v 210 (485)
T 1rzu_A 131 PDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATAL 210 (485)
T ss_dssp CSEEEEEHHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEE
T ss_pred CCEEEecccchhHHHHHHhhcccCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHHhhcCEE
Confidence 389999999888888888764 36789999999875421 11111 110 01122234579999
Q ss_pred eeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhcc-----------chHHHHHHHH
Q 004314 261 GFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRL-----------ADKDWRVQEL 329 (761)
Q Consensus 261 gF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~-----------~~~~~~~~~l 329 (761)
...+....+.+.+. ..|..... . +.....++.++|+|||.+.|.+.... +...+....+
T Consensus 211 i~~S~~~~~~~~~~---~~g~~~~~---~----~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (485)
T 1rzu_A 211 STVSPSYAEEILTA---EFGMGLEG---V----IGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAV 280 (485)
T ss_dssp EESCHHHHHHTTSH---HHHTTCHH---H----HHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHH
T ss_pred EecCHhHHHHHhcc---ccCcchHH---H----HHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHH
Confidence 99988777665421 01100000 0 00011256789999999988754210 0111223456
Q ss_pred HHHc--C--CCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcc
Q 004314 330 KQQF--E--GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINET 405 (761)
Q Consensus 330 r~~~--~--~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~ 405 (761)
++++ + ++++|+++||+++.||+..+++|+.++.+ ++ +.|+++|. ++ .++++++++++.+.+
T Consensus 281 r~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~----~~l~ivG~-----g~--~~~~~~l~~~~~~~~-- 345 (485)
T 1rzu_A 281 AEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS--LG----GRLVVLGA-----GD--VALEGALLAAASRHH-- 345 (485)
T ss_dssp HHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH--TT----CEEEEEEC-----BC--HHHHHHHHHHHHHTT--
T ss_pred HHhcCCCCCCCeEEEEEccCccccCHHHHHHHHHHHHh--cC----ceEEEEeC-----Cc--hHHHHHHHHHHHhCC--
Confidence 6666 2 26799999999999999999999999876 34 45888873 32 234566777776643
Q ss_pred cCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCc
Q 004314 406 FGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCS 485 (761)
Q Consensus 406 ~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~ 485 (761)
..|+++.+. +.+++..+|+.||++|+||..||||++++|||+||. |+|+|+.+|..
T Consensus 346 ------~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~-----------------PvI~s~~gg~~ 401 (485)
T 1rzu_A 346 ------GRVGVAIGY-NEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGC-----------------IPVVARTGGLA 401 (485)
T ss_dssp ------TTEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTC-----------------EEEEESSHHHH
T ss_pred ------CcEEEecCC-CHHHHHHHHhcCCEEEECcccCCCCHHHHHHHHCCC-----------------CEEEeCCCChh
Confidence 147756665 788889999999999999999999999999999976 99999999988
Q ss_pred cccc------------CcEEECCCCHHHHHHHHHHHHc--CCHHHHHHHHHHHhhHHhhCCHHHHHHHHHHHHHHHHH
Q 004314 486 PSLS------------GAIRVNPWNIEATAEAMHEAIQ--MNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERTCK 549 (761)
Q Consensus 486 ~~l~------------~al~VnP~d~~~~A~ai~~aL~--m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l~~~~~ 549 (761)
+.+. .|++++|.|++++|++|.+++. ..++.++...++.++ +.+++...++++++-.+++..
T Consensus 402 e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~~y~~~~~ 477 (485)
T 1rzu_A 402 DTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMK--SDVSWEKSAGLYAALYSQLIS 477 (485)
T ss_dssp HHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT--CCCBHHHHHHHHHHHHHHHTC
T ss_pred heecccccccccccCCcceEeCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH--HhCChHHHHHHHHHHHHHhhC
Confidence 8883 3799999999999999999994 234444444444543 678999999999888776643
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-22 Score=225.24 Aligned_cols=287 Identities=13% Similarity=0.137 Sum_probs=204.7
Q ss_pred HHhCCCCCEEEEeCCccchHHHHHHHh-cC-CCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcC--EEeeeCHHHHHH
Q 004314 195 EVINPEDDYVWIHDYHLMVLPTFLRRR-FT-RLRMGFFLHSPFPSSEIYRTLPVREEILKALLNAD--LIGFHTFDYARH 270 (761)
Q Consensus 195 ~~~~~~~DiVwvhDyhl~llp~~lr~~-~~-~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~D--ligF~t~~~~~~ 270 (761)
...+| |+|++|.+...+.+...+.. .| ..++...+|...+... ..+-..+-.+| .+.+.+....+.
T Consensus 78 ~~~~~--Div~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~ii~~S~~~~~~ 147 (413)
T 3oy2_A 78 DVHKP--DIVMIYNDPIVIGNYLLAMGKCSHRTKIVLYVDLVSKNIR--------ENLWWIFSHPKVVGVMAMSKCWISD 147 (413)
T ss_dssp HHHCC--SEEEEEECHHHHHHHHHHGGGCCSCCEEEEEECCCSBSCC--------GGGGGGGGCTTEEEEEESSTHHHHH
T ss_pred HhcCC--CEEEEcchHHHHHHHHHHhccCCCCCceeeeccccchhhH--------HHHHHHHhccCCceEEEcCHHHHHH
Confidence 33466 89999954433333332222 22 3455666665543211 11212234567 888888876666
Q ss_pred HHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc---C--CCeEEEeecCc
Q 004314 271 FLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---E--GKTVLLGVDDM 345 (761)
Q Consensus 271 Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~---~--~~~vil~VdRl 345 (761)
+.. +|. ..++.++|+|||.+.|.. .++++ + ++++|+++||+
T Consensus 148 ~~~-----~~~----------------~~~~~vi~ngvd~~~~~~-------------~~~~~~~~~~~~~~~il~vGr~ 193 (413)
T 3oy2_A 148 ICN-----YGC----------------KVPINIVSHFVDTKTIYD-------------ARKLVGLSEYNDDVLFLNMNRN 193 (413)
T ss_dssp HHH-----TTC----------------CSCEEECCCCCCCCCCTT-------------HHHHTTCGGGTTSEEEECCSCS
T ss_pred HHH-----cCC----------------CCceEEeCCCCCHHHHHH-------------HHHhcCCCcccCceEEEEcCCC
Confidence 543 232 125788999999988821 12233 2 68899999999
Q ss_pred cccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHH
Q 004314 346 DIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSE 425 (761)
Q Consensus 346 d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~e 425 (761)
.+.||+..+++|+.++.+++|+++ |+++|..... ...++++.+++++++.+..-.-.-+..|+++.+.++.++
T Consensus 194 ~~~Kg~~~li~a~~~l~~~~~~~~----l~ivG~g~~~---~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~~~~ 266 (413)
T 3oy2_A 194 TARKRLDIYVLAAARFISKYPDAK----VRFLCNSHHE---SKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDER 266 (413)
T ss_dssp SGGGTHHHHHHHHHHHHHHCTTCC----EEEEEECCTT---CSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCCHHH
T ss_pred chhcCcHHHHHHHHHHHHhCCCcE----EEEEeCCccc---chhhHHHHHHHHHHHcCcccccccccceeeccCcCCHHH
Confidence 999999999999999999999887 8888854321 112345666677766542200000002677888999999
Q ss_pred HHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcccccC---------------
Q 004314 426 RAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLSG--------------- 490 (761)
Q Consensus 426 l~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~--------------- 490 (761)
+..+|+.||++|+||..||||++++|||+||. |+|+|+.+|..+.+.+
T Consensus 267 ~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~-----------------PvI~s~~~g~~e~v~~~~~~~i~~~~~~~~~ 329 (413)
T 3oy2_A 267 VDMMYNACDVIVNCSSGEGFGLCSAEGAVLGK-----------------PLIISAVGGADDYFSGDCVYKIKPSAWISVD 329 (413)
T ss_dssp HHHHHHHCSEEEECCSCCSSCHHHHHHHTTTC-----------------CEEEECCHHHHHHSCTTTSEEECCCEEEECT
T ss_pred HHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCC-----------------CEEEcCCCChHHHHccCcccccccccccccc
Confidence 99999999999999999999999999999976 9999999998888842
Q ss_pred ---cE--EECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHh-hCCHHHHHHHHHHHHHHHHHhh
Q 004314 491 ---AI--RVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVS-THDVAYWARSFFQDMERTCKDH 551 (761)
Q Consensus 491 ---al--~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~Wa~~~l~~l~~~~~~~ 551 (761)
|+ +++|.|++++|++| ++++. +++++.+.++.++++. .+++..+++++++-++++.+..
T Consensus 330 ~~~G~~gl~~~~d~~~la~~i-~l~~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~~ 394 (413)
T 3oy2_A 330 DRDGIGGIEGIIDVDDLVEAF-TFFKD-EKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLRVE 394 (413)
T ss_dssp TTCSSCCEEEECCHHHHHHHH-HHTTS-HHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTC--
T ss_pred cccCcceeeCCCCHHHHHHHH-HHhcC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhc
Confidence 77 99999999999999 99985 4566777778888884 6799999999999998876543
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=6.3e-23 Score=245.29 Aligned_cols=312 Identities=11% Similarity=0.100 Sum_probs=213.9
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchH---------H---HHHHhhhcCEEeeeCHHHH
Q 004314 201 DDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVRE---------E---ILKALLNADLIGFHTFDYA 268 (761)
Q Consensus 201 ~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~---------~---il~~ll~~DligF~t~~~~ 268 (761)
-|+|+.|++...+++.+++++. ++|++++.|...+..-......|+. . -...+-.||.|...|...+
T Consensus 408 PDVIHsH~~~sglva~llar~~-gvP~V~T~Hsl~~~k~~~~~~~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~~~ 486 (816)
T 3s28_A 408 PDLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEI 486 (816)
T ss_dssp CSEEEEEHHHHHHHHHHHHHHH-TCCEEEECSCCHHHHSTTTTTTHHHHHHHHCHHHHHHHHHHHHHHSSEEEESCHHHH
T ss_pred CeEEEeCCchHHHHHHHHHHHc-CCCEEEEEecccccccccccchhhhHHHHHHHHHHHHHHHHHHHhCCEEEECCHHHH
Confidence 3999999877767777776654 7899999997643211000011110 0 0114567999999888766
Q ss_pred HHHHHHHhhhcCce--------eeccCceeEEEEcCeEEEEEEeccccCcccchhhhccch----HHHHHHHH-------
Q 004314 269 RHFLSCCSRMLGLE--------YQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLAD----KDWRVQEL------- 329 (761)
Q Consensus 269 ~~Fl~~~~r~lg~~--------~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~----~~~~~~~l------- 329 (761)
+.....+.. .+.. +...+ ++..... ++.++|+|||.+.|.+...... .......+
T Consensus 487 ~~l~~~~~~-y~~~~~~~~p~Lyr~~~---gI~~~~~--ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~ 560 (816)
T 3s28_A 487 AGSKETVGQ-YESHTAFTLPGLYRVVH---GIDVFDP--KFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVEN 560 (816)
T ss_dssp HCCSSSCCT-TGGGSSEEETTTEEEEE---SCCTTCT--TEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCB
T ss_pred HHHHHHHHH-hhhhhccccchhhhccc---ccccCCC--CEEEECCCcCHHHcCccchhhhhhhhccccccccccchhhH
Confidence 542211100 0000 00000 0111122 7889999999999976532111 01111111
Q ss_pred HHH-----cCCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCC--CCCchhHHHHHHHHHHHHHHH
Q 004314 330 KQQ-----FEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPA--RGRGKDLEEIQAEIHATCKRI 402 (761)
Q Consensus 330 r~~-----~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~--r~~~~~~~~l~~ev~~lv~~i 402 (761)
++. -+++++|+++||+++.||+..+++|+.++.+.+|+++ |+++|... .....+..+..+++.+++++.
T Consensus 561 r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v~----LvIvG~g~~~~~~~~e~~~~~~~L~~li~~l 636 (816)
T 3s28_A 561 KEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELAN----LVVVGGDRRKESKDNEEKAEMKKMYDLIEEY 636 (816)
T ss_dssp TTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHCE----EEEECCCTTSCCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCCeE----EEEEeCCCcccccchhhHHHHHHHHHHHHHc
Confidence 111 1467899999999999999999999999988777655 88888643 122233445567777787776
Q ss_pred hcccCCCCCccEEEEc---CCCCHHHHHHHHH-hcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEE
Q 004314 403 NETFGRPGYEPVVFID---KPVTLSERAAYYT-IAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVV 478 (761)
Q Consensus 403 n~~~g~~~~~pV~~~~---~~v~~~el~aly~-~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~ 478 (761)
+.. ..|.|++ +.++.+++..+|+ +||+||+||..||||++++||||||. |+|+
T Consensus 637 gL~------~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~-----------------PVIa 693 (816)
T 3s28_A 637 KLN------GQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL-----------------PTFA 693 (816)
T ss_dssp TCB------BBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTC-----------------CEEE
T ss_pred CCC------CcEEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCC-----------------CEEE
Confidence 522 2477664 2455689999999 68999999999999999999999976 9999
Q ss_pred cCCCCCccccc---CcEEECCCCHHHHHHHHHHHH----cCCHHHHHHHHHHHhhHH-hhCCHHHHHHHHHHHHHHH
Q 004314 479 SEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAI----QMNEAEKQLRHEKHYRYV-STHDVAYWARSFFQDMERT 547 (761)
Q Consensus 479 Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL----~m~~~er~~r~~~~~~~v-~~~~~~~Wa~~~l~~l~~~ 547 (761)
|+.+|..+.+. .|++|+|.|++++|++|.+++ ..+ +.++...++.++++ +.+++..+++++++-.++.
T Consensus 694 sd~GG~~EiV~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll~d~-~~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~~ 769 (816)
T 3s28_A 694 TCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDP-SHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVY 769 (816)
T ss_dssp ESSBTHHHHCCBTTTBEEECTTSHHHHHHHHHHHHHHHHHCT-HHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHH
T ss_pred eCCCChHHHHccCCcEEEeCCCCHHHHHHHHHHHHHHhccCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 99999999883 489999999999999998877 555 46677777888888 7799999999998877654
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=3.8e-22 Score=219.83 Aligned_cols=282 Identities=11% Similarity=0.151 Sum_probs=201.9
Q ss_pred HHhCCCCCEEEEeCCccchHHHHHHHhc-C-CCeEEEEEecCCCchhHHhcCcchHHHHH-HhhhcCEEeeeCHHHHHHH
Q 004314 195 EVINPEDDYVWIHDYHLMVLPTFLRRRF-T-RLRMGFFLHSPFPSSEIYRTLPVREEILK-ALLNADLIGFHTFDYARHF 271 (761)
Q Consensus 195 ~~~~~~~DiVwvhDyhl~llp~~lr~~~-~-~~~ig~flH~PfP~~e~fr~lp~r~~il~-~ll~~DligF~t~~~~~~F 271 (761)
+..+| |+|++|+.+...++.++.++. . ++|+.+++|...+ ..+..-+....+.+ .+-.+|.|.+.+....+.+
T Consensus 96 ~~~~~--Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~--~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~ 171 (394)
T 2jjm_A 96 QRENL--DILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDI--TVLGSDPSLNNLIRFGIEQSDVVTAVSHSLINET 171 (394)
T ss_dssp HHHTC--SEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHH--HTTTTCTTTHHHHHHHHHHSSEEEESCHHHHHHH
T ss_pred HHcCC--CEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcc--cccCCCHHHHHHHHHHHhhCCEEEECCHHHHHHH
Confidence 34466 899999876554444444333 2 6899999997422 11111222223333 3457999999998776665
Q ss_pred HHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc---CCCeEEEeecCcccc
Q 004314 272 LSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIF 348 (761)
Q Consensus 272 l~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~ 348 (761)
.+ ..+. ..++.++|+|||.+.|.+... ..+++++ +++++|+++||+.+.
T Consensus 172 ~~----~~~~----------------~~~~~vi~ngv~~~~~~~~~~--------~~~~~~~~~~~~~~~i~~~G~~~~~ 223 (394)
T 2jjm_A 172 HE----LVKP----------------NKDIQTVYNFIDERVYFKRDM--------TQLKKEYGISESEKILIHISNFRKV 223 (394)
T ss_dssp HH----HTCC----------------SSCEEECCCCCCTTTCCCCCC--------HHHHHHTTCC---CEEEEECCCCGG
T ss_pred HH----hhCC----------------cccEEEecCCccHHhcCCcch--------HHHHHHcCCCCCCeEEEEeeccccc
Confidence 43 1121 125678999999998865311 2344555 467899999999999
Q ss_pred CChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHH
Q 004314 349 KGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAA 428 (761)
Q Consensus 349 KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~a 428 (761)
||+..+++|++++.++ +++ .|+++|. +++.+ ++++++++.+.. ..|.+++ . .+++..
T Consensus 224 Kg~~~li~a~~~l~~~-~~~----~l~i~G~-----g~~~~----~l~~~~~~~~l~------~~v~~~g-~--~~~~~~ 280 (394)
T 2jjm_A 224 KRVQDVVQAFAKIVTE-VDA----KLLLVGD-----GPEFC----TILQLVKNLHIE------DRVLFLG-K--QDNVAE 280 (394)
T ss_dssp GTHHHHHHHHHHHHHS-SCC----EEEEECC-----CTTHH----HHHHHHHTTTCG------GGBCCCB-S--CSCTHH
T ss_pred cCHHHHHHHHHHHHhh-CCC----EEEEECC-----chHHH----HHHHHHHHcCCC------CeEEEeC-c--hhhHHH
Confidence 9999999999998776 444 4887773 44433 344555444311 2365554 3 578999
Q ss_pred HHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCHHHHHHH
Q 004314 429 YYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEA 505 (761)
Q Consensus 429 ly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~a 505 (761)
+|+.||++|+||..||||++++|||+||. |+|+|+.+|..+.+. .|++++|.|++++|++
T Consensus 281 ~~~~adv~v~ps~~e~~~~~~~EAma~G~-----------------PvI~~~~~~~~e~v~~~~~g~~~~~~d~~~la~~ 343 (394)
T 2jjm_A 281 LLAMSDLMLLLSEKESFGLVLLEAMACGV-----------------PCIGTRVGGIPEVIQHGDTGYLCEVGDTTGVADQ 343 (394)
T ss_dssp HHHTCSEEEECCSCCSCCHHHHHHHHTTC-----------------CEEEECCTTSTTTCCBTTTEEEECTTCHHHHHHH
T ss_pred HHHhCCEEEeccccCCCchHHHHHHhcCC-----------------CEEEecCCChHHHhhcCCceEEeCCCCHHHHHHH
Confidence 99999999999999999999999999976 999999999988883 4899999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHhhHH-hhCCHHHHHHHHHHHHHHHHH
Q 004314 506 MHEAIQMNEAEKQLRHEKHYRYV-STHDVAYWARSFFQDMERTCK 549 (761)
Q Consensus 506 i~~aL~m~~~er~~r~~~~~~~v-~~~~~~~Wa~~~l~~l~~~~~ 549 (761)
|.++++.+ ++++...++.++++ ..+++...++.+++.++++.+
T Consensus 344 i~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 387 (394)
T 2jjm_A 344 AIQLLKDE-ELHRNMGERARESVYEQFRSEKIVSQYETIYYDVLR 387 (394)
T ss_dssp HHHHHHCH-HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTC-
T ss_pred HHHHHcCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 99999954 45666677788888 789999999999988877543
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=3e-21 Score=221.99 Aligned_cols=310 Identities=14% Similarity=0.148 Sum_probs=202.6
Q ss_pred CEEEEeCCccchHHHHHHHhcCCCeEEEEEecC----C----CchhHHhcCc--------------chHHHHH-HhhhcC
Q 004314 202 DYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSP----F----PSSEIYRTLP--------------VREEILK-ALLNAD 258 (761)
Q Consensus 202 DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~P----f----P~~e~fr~lp--------------~r~~il~-~ll~~D 258 (761)
|++|.||+|..++|.+||++.++++.+|+.|.- + -..+++..+. ..-.+++ ++..||
T Consensus 183 dIiH~HDW~tg~~~~~Lk~~~~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~~~EKaga~~AD 262 (725)
T 3nb0_A 183 IVAHFHEWLAGVALPLCRKRRIDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIERAAAHSAD 262 (725)
T ss_dssp EEEEEESGGGCTHHHHHHHTTCSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHHTTCHHHHHHHHHHHHHSS
T ss_pred cEEEeCchhhhHHHHHHHHhCCCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhhhchhHHHHHHHHHHHhCC
Confidence 899999999999999999999999999999975 1 1111222111 1122333 356889
Q ss_pred EEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccch-HHHHHHHH----HHHc
Q 004314 259 LIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLAD-KDWRVQEL----KQQF 333 (761)
Q Consensus 259 ligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~-~~~~~~~l----r~~~ 333 (761)
.|..-+..|++.-. .+++.. ...| +|||||.+.|.+...... ..+.++++ +..+
T Consensus 263 ~ITTVS~~yA~Ei~----~Ll~r~---------------~d~i--IpNGID~~~f~p~~~~~~~k~~aK~klq~~l~~~~ 321 (725)
T 3nb0_A 263 VFTTVSQITAFEAE----HLLKRK---------------PDGI--LPNGLNVIKFQAFHEFQNLHALKKEKINDFVRGHF 321 (725)
T ss_dssp EEEESSHHHHHHHH----HHTSSC---------------CSEE--CCCCBCCCCCSSTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEECCHHHHHHHH----HHhcCC---------------CCEE--EcCCccccccCcchhhHHHHHHHHHHHHHHHHhhc
Confidence 99988888876543 244321 1122 999999999976411000 01112223 3322
Q ss_pred -------CCCeEEEe-ecCcc-ccCChHHHHHHHHHHHHhC--CCCcCceeEEEEecCCCCCchhH-----HHHHHHHHH
Q 004314 334 -------EGKTVLLG-VDDMD-IFKGVDLKLLAMEHLLKQH--PKWQGRAVLVQIANPARGRGKDL-----EEIQAEIHA 397 (761)
Q Consensus 334 -------~~~~vil~-VdRld-~~KGi~~~l~A~~~ll~~~--P~~~~~vvLvqi~~p~r~~~~~~-----~~l~~ev~~ 397 (761)
.+++++++ ++|++ ..||++.+++|+.+|...- .+.. +-|+..|..|+...+... +.+.+++.+
T Consensus 322 ~~~l~l~~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~-~~vvafii~p~~~~~~~~~~l~~~~~~~~l~~ 400 (725)
T 3nb0_A 322 HGCFDFDLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSK-KTVVAFIVMPAKNNSFTVEALKGQAEVRALEN 400 (725)
T ss_dssp TTCCCSCGGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCC-CEEEEEEECCCCEEEECHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCC-CcEEEEEEeCCCCCCCchhhhcchhHHHHHHH
Confidence 24667776 79999 5799999999999987431 1121 223333444654433211 111111111
Q ss_pred HH-----------------------------------------------------------------------------H
Q 004314 398 TC-----------------------------------------------------------------------------K 400 (761)
Q Consensus 398 lv-----------------------------------------------------------------------------~ 400 (761)
.+ +
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r 480 (725)
T 3nb0_A 401 TVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIR 480 (725)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHH
Confidence 11 1
Q ss_pred HHhcccCCCCCccEEEEcCCCCHH------HHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCc
Q 004314 401 RINETFGRPGYEPVVFIDKPVTLS------ERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKS 474 (761)
Q Consensus 401 ~in~~~g~~~~~pV~~~~~~v~~~------el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g 474 (761)
+++-.=...+-..|+|+.+.++.. ++..+|+.||+||+||.+||||++++||||||.
T Consensus 481 ~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~----------------- 543 (725)
T 3nb0_A 481 QVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGV----------------- 543 (725)
T ss_dssp HHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTC-----------------
T ss_pred hcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHcCC-----------------
Confidence 111000011233578888888876 599999999999999999999999999999976
Q ss_pred eEEEcCCCCCccccc----------CcEEE---CCCCHHHHHHHHHHHHc----CCHHHHHHHHHHHhhHHhhCCHHHHH
Q 004314 475 MLVVSEFIGCSPSLS----------GAIRV---NPWNIEATAEAMHEAIQ----MNEAEKQLRHEKHYRYVSTHDVAYWA 537 (761)
Q Consensus 475 ~lV~Se~~G~~~~l~----------~al~V---nP~d~~~~A~ai~~aL~----m~~~er~~r~~~~~~~v~~~~~~~Wa 537 (761)
|+|+|..+|+.+.+. .|++| +|.|+++++++|.++|. +++.+++.+.++.++....++|..-+
T Consensus 544 PvI~s~~gG~~d~V~dg~~~~~~~~tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~iA 623 (725)
T 3nb0_A 544 PSITTNVSGFGSYMEDLIETNQAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLDWKRMG 623 (725)
T ss_dssp CEEEETTBHHHHHHHTTSCHHHHHHTTEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHHHH
T ss_pred CEEEeCCCChhhhhhccccccCCCCceEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 999999999987762 37888 45677777777766664 56666666666677777889999999
Q ss_pred HHHHHHHHHHHHh
Q 004314 538 RSFFQDMERTCKD 550 (761)
Q Consensus 538 ~~~l~~l~~~~~~ 550 (761)
+.+++..+++...
T Consensus 624 ~~Yl~~Ye~aL~~ 636 (725)
T 3nb0_A 624 LEYVKARQLALRR 636 (725)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh
Confidence 9998887766543
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=5.5e-22 Score=218.37 Aligned_cols=278 Identities=13% Similarity=0.109 Sum_probs=209.8
Q ss_pred HHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHH
Q 004314 194 IEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLS 273 (761)
Q Consensus 194 ~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~ 273 (761)
++..++ |+|++|.+....+..++.+. .+.++.+++|..+|....++.+-. .+-..+-.+|.+.+.+....+.+.+
T Consensus 103 l~~~~~--Dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~--~~~~~~~~~d~ii~~s~~~~~~~~~ 177 (406)
T 2gek_A 103 IAEGDF--DVLHIHEPNAPSLSMLALQA-AEGPIVATFHTSTTKSLTLSVFQG--ILRPYHEKIIGRIAVSDLARRWQME 177 (406)
T ss_dssp HHHHCC--SEEEEECCCSSSHHHHHHHH-EESSEEEEECCCCCSHHHHHHHHS--TTHHHHTTCSEEEESSHHHHHHHHH
T ss_pred HHhcCC--CEEEECCccchHHHHHHHHh-cCCCEEEEEcCcchhhhhHHHHHH--HHHHHHhhCCEEEECCHHHHHHHHH
Confidence 344465 89999999887765555544 368999999999887543322110 0113456799999999877666653
Q ss_pred HHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc-CCCeEEEeecCc-cccCCh
Q 004314 274 CCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF-EGKTVLLGVDDM-DIFKGV 351 (761)
Q Consensus 274 ~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VdRl-d~~KGi 351 (761)
. ++ .. ++ ++|+|||.+.|.+.... ... +++++|+++||+ .+.||+
T Consensus 178 ~----~~---------------~~--~~-vi~~~v~~~~~~~~~~~-----------~~~~~~~~~i~~~G~~~~~~Kg~ 224 (406)
T 2gek_A 178 A----LG---------------SD--AV-EIPNGVDVASFADAPLL-----------DGYPREGRTVLFLGRYDEPRKGM 224 (406)
T ss_dssp H----HS---------------SC--EE-ECCCCBCHHHHHTCCCC-----------TTCSCSSCEEEEESCTTSGGGCH
T ss_pred h----cC---------------CC--cE-EecCCCChhhcCCCchh-----------hhccCCCeEEEEEeeeCccccCH
Confidence 1 12 11 56 89999999887643211 011 256899999999 999999
Q ss_pred HHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHH
Q 004314 352 DLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYT 431 (761)
Q Consensus 352 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~ 431 (761)
..+++|+.++.+++|+++ |+++|. +++ +++ .+++++.. ..|.+ .+.++.+++..+|+
T Consensus 225 ~~li~a~~~l~~~~~~~~----l~i~G~-----~~~-~~l----~~~~~~~~--------~~v~~-~g~~~~~~~~~~~~ 281 (406)
T 2gek_A 225 AVLLAALPKLVARFPDVE----ILIVGR-----GDE-DEL----REQAGDLA--------GHLRF-LGQVDDATKASAMR 281 (406)
T ss_dssp HHHHHHHHHHHTTSTTCE----EEEESC-----SCH-HHH----HHHTGGGG--------GGEEE-CCSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCeE----EEEEcC-----CcH-HHH----HHHHHhcc--------CcEEE-EecCCHHHHHHHHH
Confidence 999999999998888765 887773 333 333 33333321 13665 57999999999999
Q ss_pred hcccceeccc-ccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCHHHHHHHHH
Q 004314 432 IAECVVVTAV-RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMH 507 (761)
Q Consensus 432 ~ADv~vvtS~-~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~ 507 (761)
.||++|+||. .||||++++|||+||. |+|+|..+|..+.+. .|++++|.|+++++++|.
T Consensus 282 ~adv~v~ps~~~e~~~~~~~Ea~a~G~-----------------PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~ 344 (406)
T 2gek_A 282 SADVYCAPHLGGESFGIVLVEAMAAGT-----------------AVVASDLDAFRRVLADGDAGRLVPVDDADGMAAALI 344 (406)
T ss_dssp HSSEEEECCCSCCSSCHHHHHHHHHTC-----------------EEEECCCHHHHHHHTTTTSSEECCTTCHHHHHHHHH
T ss_pred HCCEEEecCCCCCCCchHHHHHHHcCC-----------------CEEEecCCcHHHHhcCCCceEEeCCCCHHHHHHHHH
Confidence 9999999997 9999999999999976 999999988888774 489999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHHHHHHHHHh
Q 004314 508 EAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERTCKD 550 (761)
Q Consensus 508 ~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l~~~~~~ 550 (761)
++++.+ ++++...++.++++..+++...++++++-+++....
T Consensus 345 ~l~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 386 (406)
T 2gek_A 345 GILEDD-QLRAGYVARASERVHRYDWSVVSAQIMRVYETVSGA 386 (406)
T ss_dssp HHHHCH-HHHHHHHHHHHHHGGGGBHHHHHHHHHHHHHHHCCT
T ss_pred HHHcCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 999964 456666777888888999999999999988876544
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.85 E-value=2.2e-20 Score=186.02 Aligned_cols=189 Identities=17% Similarity=0.214 Sum_probs=148.7
Q ss_pred eccccCcccch--hhhccchHHHHHHHHHHHc--CCCeEEEeecCcc-ccCChHHHHHHHHHHH--HhCCCCcCceeEEE
Q 004314 304 MPVGIHMGQIE--SVLRLADKDWRVQELKQQF--EGKTVLLGVDDMD-IFKGVDLKLLAMEHLL--KQHPKWQGRAVLVQ 376 (761)
Q Consensus 304 ~P~GId~~~f~--~~~~~~~~~~~~~~lr~~~--~~~~vil~VdRld-~~KGi~~~l~A~~~ll--~~~P~~~~~vvLvq 376 (761)
+|+|||++.|. +.. ....+....+++++ +++++|+++||+. +.||+..+++|+.++. +++|+++ |++
T Consensus 2 ipngvd~~~f~~~~~~--~~~~~~~~~~r~~~~~~~~~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~----l~i 75 (200)
T 2bfw_A 2 SHNGIDCSFWNESYLT--GSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMR----FII 75 (200)
T ss_dssp ---CCCTTTSSGGGSC--SCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEE----EEE
T ss_pred CCCccChhhccccccc--cchhhHHHHHHHHcCCCCCCEEEEeeccccccCCHHHHHHHHHHHHhhccCCCeE----EEE
Confidence 69999999997 532 11222345677777 4677999999999 9999999999999997 7777655 887
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeee
Q 004314 377 IANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCR 456 (761)
Q Consensus 377 i~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~ 456 (761)
+|. ++ .+..+++.+++++.+ .|+++.+.++.+++..+|+.||++|+||..||||++++|||+||
T Consensus 76 ~G~-----~~--~~~~~~l~~~~~~~~---------~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G 139 (200)
T 2bfw_A 76 IGK-----GD--PELEGWARSLEEKHG---------NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLG 139 (200)
T ss_dssp ECC-----BC--HHHHHHHHHHHHHCT---------TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTT
T ss_pred ECC-----CC--hHHHHHHHHHHHhcC---------CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCC
Confidence 773 22 123455566665543 47764679999999999999999999999999999999999997
Q ss_pred cCCCCCCCCCCCCCCCCceEEEcCCCCCccccc--CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhC
Q 004314 457 QGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS--GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTH 531 (761)
Q Consensus 457 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~ 531 (761)
. |+|+|..+|..+.+. .|++++|.|+++++++|.++++|.+++++.+.++.++++.++
T Consensus 140 ~-----------------PvI~~~~~~~~e~~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~~f 199 (200)
T 2bfw_A 140 A-----------------IPIASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSF 199 (200)
T ss_dssp C-----------------EEEEESCHHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHT
T ss_pred C-----------------CEEEeCCCChHHHcCCCceEEecCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhc
Confidence 6 999999998888872 489999999999999999999976667777777778777654
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=2.5e-20 Score=201.34 Aligned_cols=243 Identities=12% Similarity=-0.024 Sum_probs=183.6
Q ss_pred HHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHH
Q 004314 193 VIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFL 272 (761)
Q Consensus 193 i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl 272 (761)
+++..++ |+|++|.++...+. .+..+.| .+++|..++... .+|.+.+.+....+.+.
T Consensus 79 ~l~~~~~--Dvi~~~~~~~~~~~----~~~~~~p-v~~~h~~~~~~~----------------~~d~ii~~S~~~~~~~~ 135 (342)
T 2iuy_A 79 WLRTADV--DVVHDHSGGVIGPA----GLPPGTA-FISSHHFTTRPV----------------NPVGCTYSSRAQRAHCG 135 (342)
T ss_dssp HHHHCCC--SEEEECSSSSSCST----TCCTTCE-EEEEECSSSBCS----------------CCTTEEESCHHHHHHTT
T ss_pred HHHhcCC--CEEEECCchhhHHH----HhhcCCC-EEEecCCCCCcc----------------cceEEEEcCHHHHHHHh
Confidence 3444455 89999998765432 3345788 899999886431 18888888876554432
Q ss_pred HHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChH
Q 004314 273 SCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVD 352 (761)
Q Consensus 273 ~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~ 352 (761)
+ ..++.++|+|||.+.|.+... ...++++|+++||+.+.||+.
T Consensus 136 ~------------------------~~~~~vi~ngvd~~~~~~~~~-------------~~~~~~~i~~vG~~~~~Kg~~ 178 (342)
T 2iuy_A 136 G------------------------GDDAPVIPIPVDPARYRSAAD-------------QVAKEDFLLFMGRVSPHKGAL 178 (342)
T ss_dssp C------------------------CTTSCBCCCCBCGGGSCCSTT-------------CCCCCSCEEEESCCCGGGTHH
T ss_pred c------------------------CCceEEEcCCCChhhcCcccc-------------cCCCCCEEEEEeccccccCHH
Confidence 1 013567899999988865321 124567899999999999999
Q ss_pred HHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHh
Q 004314 353 LKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTI 432 (761)
Q Consensus 353 ~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ 432 (761)
.+++|++++ + +.|+++|. ++.. +++++++++++ ..|.| .|.++.+++..+|+.
T Consensus 179 ~li~a~~~~-----~----~~l~i~G~-----g~~~----~~l~~~~~~~~--------~~v~~-~g~~~~~~l~~~~~~ 231 (342)
T 2iuy_A 179 EAAAFAHAC-----G----RRLVLAGP-----AWEP----EYFDEITRRYG--------STVEP-IGEVGGERRLDLLAS 231 (342)
T ss_dssp HHHHHHHHH-----T----CCEEEESC-----CCCH----HHHHHHHHHHT--------TTEEE-CCCCCHHHHHHHHHH
T ss_pred HHHHHHHhc-----C----cEEEEEeC-----cccH----HHHHHHHHHhC--------CCEEE-eccCCHHHHHHHHHh
Confidence 999999886 3 34887773 3333 33444555543 14665 578999999999999
Q ss_pred cccceeccc----------ccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcccc-c----CcEEECCC
Q 004314 433 AECVVVTAV----------RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL-S----GAIRVNPW 497 (761)
Q Consensus 433 ADv~vvtS~----------~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~----~al~VnP~ 497 (761)
||++|+||. .||||++++|||+||. |+|+|+.+|..+.+ . .|++++|
T Consensus 232 adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~-----------------PvI~s~~~~~~e~~~~~~~~~g~~~~~- 293 (342)
T 2iuy_A 232 AHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGT-----------------PVVGTGNGCLAEIVPSVGEVVGYGTDF- 293 (342)
T ss_dssp CSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTC-----------------CEEECCTTTHHHHGGGGEEECCSSSCC-
T ss_pred CCEEEECCcccccccccccccCccHHHHHHHhcCC-----------------CEEEcCCCChHHHhcccCCCceEEcCC-
Confidence 999999999 8999999999999976 99999999988888 3 3899999
Q ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHhhHH-hhCCHHHHHHHHHHHHHHHHH
Q 004314 498 NIEATAEAMHEAIQMNEAEKQLRHEKHYRYV-STHDVAYWARSFFQDMERTCK 549 (761)
Q Consensus 498 d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~Wa~~~l~~l~~~~~ 549 (761)
|++++|++|.++++ .++.++++ ..+++...++++++-++++.+
T Consensus 294 d~~~l~~~i~~l~~---------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 337 (342)
T 2iuy_A 294 APDEARRTLAGLPA---------SDEVRRAAVRLWGHVTIAERYVEQYRRLLA 337 (342)
T ss_dssp CHHHHHHHHHTSCC---------HHHHHHHHHHHHBHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHH---------HHHHHHHHHHhcCHHHHHHHHHHHHHHHHc
Confidence 99999999999887 23445555 678999999999888887654
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=3.2e-21 Score=209.89 Aligned_cols=227 Identities=16% Similarity=0.165 Sum_probs=175.3
Q ss_pred hcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc--
Q 004314 256 NADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF-- 333 (761)
Q Consensus 256 ~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~-- 333 (761)
.+|.|.+.+....+.|.+ .+|.. ..++.++|+|||.+.|.+.... .....+++++
T Consensus 136 ~~d~ii~~s~~~~~~~~~----~~~~~---------------~~~~~vi~ngv~~~~~~~~~~~----~~~~~~~~~~~~ 192 (374)
T 2iw1_A 136 KSTKLMMLTDKQIADFQK----HYQTE---------------PERFQILPPGIYPDRKYSEQIP----NSREIYRQKNGI 192 (374)
T ss_dssp CCCEEEESCHHHHHHHHH----HHCCC---------------GGGEEECCCCCCGGGSGGGSCT----THHHHHHHHTTC
T ss_pred CCcEEEEcCHHHHHHHHH----HhCCC---------------hhheEEecCCcCHHhcCcccch----hHHHHHHHHhCC
Confidence 589999999887777653 12321 1256789999999988764321 1224566666
Q ss_pred -CCCeEEEeecCccccCChHHHHHHHHHHHHh-CCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCC
Q 004314 334 -EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQ-HPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGY 411 (761)
Q Consensus 334 -~~~~vil~VdRld~~KGi~~~l~A~~~ll~~-~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~ 411 (761)
.++++++++||+.+.||+..+++|++++.++ +|++ .|+++|.. +. +++++++++.+..
T Consensus 193 ~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~----~l~i~G~g-----~~-----~~~~~~~~~~~~~------ 252 (374)
T 2iw1_A 193 KEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNT----LLFVVGQD-----KP-----RKFEALAEKLGVR------ 252 (374)
T ss_dssp CTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTE----EEEEESSS-----CC-----HHHHHHHHHHTCG------
T ss_pred CCCCeEEEEeccchhhcCHHHHHHHHHHhHhccCCce----EEEEEcCC-----CH-----HHHHHHHHHcCCC------
Confidence 4678999999999999999999999988766 4554 48888742 21 2344455544321
Q ss_pred ccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc--
Q 004314 412 EPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-- 489 (761)
Q Consensus 412 ~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-- 489 (761)
..|.+++ + .+++..+|+.||++|+||..||||++++|||+||. |+|+|..+|..+.+.
T Consensus 253 ~~v~~~g-~--~~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G~-----------------Pvi~~~~~~~~e~i~~~ 312 (374)
T 2iw1_A 253 SNVHFFS-G--RNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGL-----------------PVLTTAVCGYAHYIADA 312 (374)
T ss_dssp GGEEEES-C--CSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTC-----------------CEEEETTSTTTHHHHHH
T ss_pred CcEEECC-C--cccHHHHHHhcCEEEeccccCCcccHHHHHHHCCC-----------------CEEEecCCCchhhhccC
Confidence 2477665 3 57899999999999999999999999999999976 999999999988883
Q ss_pred -CcEEEC-CCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHHHHHH
Q 004314 490 -GAIRVN-PWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMER 546 (761)
Q Consensus 490 -~al~Vn-P~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l~~ 546 (761)
.|++++ |.|++++|++|.++++.+ +.++...++.++++.++++..|++.+.+-++.
T Consensus 313 ~~g~~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 370 (374)
T 2iw1_A 313 NCGTVIAEPFSQEQLNEVLRKALTQS-PLRMAWAENARHYADTQDLYSLPEKAADIITG 370 (374)
T ss_dssp TCEEEECSSCCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHC
T ss_pred CceEEeCCCCCHHHHHHHHHHHHcCh-HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 589997 999999999999999954 46666777889999999999999988877653
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.76 E-value=3.6e-18 Score=164.92 Aligned_cols=162 Identities=11% Similarity=0.014 Sum_probs=121.6
Q ss_pred CeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEE
Q 004314 336 KTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVV 415 (761)
Q Consensus 336 ~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~ 415 (761)
+.+|+++||+++.||+..+++|+.++ +++|+ +.|+++|. ++.. +++++++.+.+. .|.
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l-~~~~~----~~l~i~G~-----g~~~----~~~~~~~~~~~~--------~v~ 59 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALS-KYKQD----IVLLLKGK-----GPDE----KKIKLLAQKLGV--------KAE 59 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTC-TTGGG----EEEEEECC-----STTH----HHHHHHHHHHTC--------EEE
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHh-ccCCC----eEEEEEeC-----CccH----HHHHHHHHHcCC--------eEE
Confidence 46899999999999999999999986 44454 45888873 4443 344455554431 244
Q ss_pred EEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcC-CCCCccccc-CcEE
Q 004314 416 FIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSE-FIGCSPSLS-GAIR 493 (761)
Q Consensus 416 ~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se-~~G~~~~l~-~al~ 493 (761)
+ +.++.+++..+|+.||++|+||..||||++++|||+||. .|+|++. .+|..+.+. ++.+
T Consensus 60 -~-g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~----------------vPvi~~~~~~~~~~~~~~~~~~ 121 (166)
T 3qhp_A 60 -F-GFVNSNELLEILKTCTLYVHAANVESEAIACLEAISVGI----------------VPVIANSPLSATRQFALDERSL 121 (166)
T ss_dssp -C-CCCCHHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHTTC----------------CEEEECCTTCGGGGGCSSGGGE
T ss_pred -E-eecCHHHHHHHHHhCCEEEECCcccCccHHHHHHHhcCC----------------CcEEeeCCCCchhhhccCCceE
Confidence 4 899999999999999999999999999999999999962 1788844 455555553 5679
Q ss_pred ECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHH
Q 004314 494 VNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWAR 538 (761)
Q Consensus 494 VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~ 538 (761)
++|.|+++++++|.++++.+ +.++...++.+++++++++..+++
T Consensus 122 ~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~~~s~~~~~~ 165 (166)
T 3qhp_A 122 FEPNNAKDLSAKIDWWLENK-LERERMQNEYAKSALNYTLENSVI 165 (166)
T ss_dssp ECTTCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHC------
T ss_pred EcCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHCChhhhhc
Confidence 99999999999999999954 466666677888887777776654
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.2e-16 Score=174.95 Aligned_cols=280 Identities=15% Similarity=0.119 Sum_probs=176.4
Q ss_pred HHHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHh-h-hcCEEeeeCHHHHH
Q 004314 192 RVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKAL-L-NADLIGFHTFDYAR 269 (761)
Q Consensus 192 ~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~l-l-~~DligF~t~~~~~ 269 (761)
++++..+| |+|++|+.....++..+-.+..++|+.+..|... +...+. ++...+.+.+ . .+|.+...+....+
T Consensus 80 ~~l~~~~p--Dvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~d~ii~~s~~~~~ 154 (384)
T 1vgv_A 80 PILAEFKP--DVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLR-TGDLYS--PWPEEANRTLTGHLAMYHFSPTETSRQ 154 (384)
T ss_dssp HHHHHHCC--SEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCC-CSCTTS--STTHHHHHHHHHTTCSEEEESSHHHHH
T ss_pred HHHHHhCC--CEEEEeCCchHHHHHHHHHHHHCCCEEEEecccc-cccccC--CCchHhhHHHHHhhccEEEcCcHHHHH
Confidence 34455577 8999998533334443433455788887766432 111111 1222333333 2 38999888887776
Q ss_pred HHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEecccc-CcccchhhhccchHHHHHHHHHHHcC----CC-eEEEeec
Q 004314 270 HFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGI-HMGQIESVLRLADKDWRVQELKQQFE----GK-TVLLGVD 343 (761)
Q Consensus 270 ~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GI-d~~~f~~~~~~~~~~~~~~~lr~~~~----~~-~vil~Vd 343 (761)
.|.. .|.. ..++.++|+|+ |...+.+.. .+.......+++++++ ++ .+++++|
T Consensus 155 ~l~~-----~g~~---------------~~~i~vi~n~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~vl~~~g 213 (384)
T 1vgv_A 155 NLLR-----ENVA---------------DSRIFITGNTVIDALLWVRDQ-VMSSDKLRSELAANYPFIDPDKKMILVTGH 213 (384)
T ss_dssp HHHH-----TTCC---------------GGGEEECCCHHHHHHHHHHHH-TTTCHHHHHHHHTTCTTCCTTSEEEEEECC
T ss_pred HHHH-----cCCC---------------hhhEEEeCChHHHHHHhhhhc-cccchhhhHHHHHhccccCCCCCEEEEEeC
Confidence 6642 2331 01356788884 433222110 0000011134555532 34 5788999
Q ss_pred Ccccc-CChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCC
Q 004314 344 DMDIF-KGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVT 422 (761)
Q Consensus 344 Rld~~-KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~ 422 (761)
|+... ||+..+++|+.++.+++|+++ |++++++ ++ +++++++++++. ...|.++ +.++
T Consensus 214 r~~~~~kg~~~li~a~~~l~~~~~~~~----l~i~~g~----~~---~~~~~l~~~~~~---------~~~v~~~-g~~~ 272 (384)
T 1vgv_A 214 RRESFGRGFEEICHALADIATTHQDIQ----IVYPVHL----NP---NVREPVNRILGH---------VKNVILI-DPQE 272 (384)
T ss_dssp CBSSCCHHHHHHHHHHHHHHHHCTTEE----EEEECCB----CH---HHHHHHHHHHTT---------CTTEEEE-CCCC
T ss_pred CccccchHHHHHHHHHHHHHhhCCCeE----EEEEcCC----CH---HHHHHHHHHhhc---------CCCEEEe-CCCC
Confidence 99987 999999999999999888764 6654322 22 234455554321 1247765 5778
Q ss_pred HHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCC-CCCccccc--CcEEECCCCH
Q 004314 423 LSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEF-IGCSPSLS--GAIRVNPWNI 499 (761)
Q Consensus 423 ~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~-~G~~~~l~--~al~VnP~d~ 499 (761)
.+++..+|+.||++|.|| |.+.+|||+||. |+|+|.. +|+.+.+. .|++|+| |+
T Consensus 273 ~~~~~~~~~~ad~~v~~S-----g~~~lEA~a~G~-----------------PvI~~~~~~~~~e~v~~g~g~lv~~-d~ 329 (384)
T 1vgv_A 273 YLPFVWLMNHAWLILTDS-----GGIQEEAPSLGK-----------------PVLVMRDTTERPEAVTAGTVRLVGT-DK 329 (384)
T ss_dssp HHHHHHHHHHCSEEEESS-----STGGGTGGGGTC-----------------CEEEESSCCSCHHHHHHTSEEEECS-SH
T ss_pred HHHHHHHHHhCcEEEECC-----cchHHHHHHcCC-----------------CEEEccCCCCcchhhhCCceEEeCC-CH
Confidence 899999999999999999 445899999976 8999987 66666563 5899988 99
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHH
Q 004314 500 EATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQ 542 (761)
Q Consensus 500 ~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~ 542 (761)
+++|++|.++|+.+ +.++.+.++.+++...+++.+.++.+.+
T Consensus 330 ~~la~~i~~ll~d~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 371 (384)
T 1vgv_A 330 QRIVEEVTRLLKDE-NEYQAMSRAHNPYGDGQACSRILEALKN 371 (384)
T ss_dssp HHHHHHHHHHHHCH-HHHHHHHSSCCTTCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCh-HHHhhhhhccCCCcCCCHHHHHHHHHHH
Confidence 99999999999864 3444444556666656666665554443
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.72 E-value=3.6e-17 Score=178.26 Aligned_cols=274 Identities=13% Similarity=0.101 Sum_probs=177.1
Q ss_pred HHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhh--hcCEEeeeCHHHHHH
Q 004314 193 VIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALL--NADLIGFHTFDYARH 270 (761)
Q Consensus 193 i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll--~~DligF~t~~~~~~ 270 (761)
+++..+| |+|++|......++..+..+..++|+.++.|.. .+...+. ++...+.+.++ .+|.+...+....+.
T Consensus 90 ~l~~~~p--Dvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~d~ii~~s~~~~~~ 164 (375)
T 3beo_A 90 VMKEAKP--DIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGL-RTWDKYS--PYPEEMNRQLTGVMADLHFSPTAKSATN 164 (375)
T ss_dssp HHHHHCC--SEEEEETTSHHHHHHHHHHHHTTCCEEEESCCC-CCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHHH
T ss_pred HHHHhCC--CEEEEeCCchHHHHHHHHHHHHCCCEEEEeccc-ccccccC--CChhHhhhhHHhhhhheeeCCCHHHHHH
Confidence 4445577 899999764333333232334577887665532 2211111 23344555443 389998888877666
Q ss_pred HHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccc-cCcccchhhhccchHHHHHHHHHHHcC-CCeEEEeecCcccc
Q 004314 271 FLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVG-IHMGQIESVLRLADKDWRVQELKQQFE-GKTVLLGVDDMDIF 348 (761)
Q Consensus 271 Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~G-Id~~~f~~~~~~~~~~~~~~~lr~~~~-~~~vil~VdRld~~ 348 (761)
+.+ .|.. ..++.++|+| +|...+.+.... ..++++++. ++.++++++|+.+.
T Consensus 165 ~~~-----~g~~---------------~~~i~vi~n~~~d~~~~~~~~~~------~~~~~~~~~~~~~vl~~~gr~~~~ 218 (375)
T 3beo_A 165 LQK-----ENKD---------------ESRIFITGNTAIDALKTTVKETY------SHPVLEKLGNNRLVLMTAHRRENL 218 (375)
T ss_dssp HHH-----TTCC---------------GGGEEECCCHHHHHHHHHCCSSC------CCHHHHTTTTSEEEEEECCCGGGT
T ss_pred HHH-----cCCC---------------cccEEEECChhHhhhhhhhhhhh------hHHHHHhccCCCeEEEEecccccc
Confidence 643 2321 1146678999 887665432100 012344453 34567789999986
Q ss_pred -CChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHH
Q 004314 349 -KGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERA 427 (761)
Q Consensus 349 -KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~ 427 (761)
||+..+++|++++.+++|+++ ++. +. +++ .+++++++++++. ...|+++ +.++..++.
T Consensus 219 ~K~~~~li~a~~~l~~~~~~~~----~i~-~~-----g~~-~~~~~~~~~~~~~---------~~~v~~~-g~~~~~~~~ 277 (375)
T 3beo_A 219 GEPMRNMFRAIKRLVDKHEDVQ----VVY-PV-----HMN-PVVRETANDILGD---------YGRIHLI-EPLDVIDFH 277 (375)
T ss_dssp THHHHHHHHHHHHHHHHCTTEE----EEE-EC-----CSC-HHHHHHHHHHHTT---------CTTEEEE-CCCCHHHHH
T ss_pred hhHHHHHHHHHHHHHhhCCCeE----EEE-eC-----CCC-HHHHHHHHHHhhc---------cCCEEEe-CCCCHHHHH
Confidence 999999999999988888764 443 31 222 2445555554321 1247755 578889999
Q ss_pred HHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcC-CCCCccccc--CcEEECCCCHHHHHH
Q 004314 428 AYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSE-FIGCSPSLS--GAIRVNPWNIEATAE 504 (761)
Q Consensus 428 aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se-~~G~~~~l~--~al~VnP~d~~~~A~ 504 (761)
.+|+.||++|+|| |.+++|||+||. |+|+|. ++|..+.+. .|++|+| |++++|+
T Consensus 278 ~~~~~ad~~v~~s-----g~~~lEA~a~G~-----------------Pvi~~~~~~~~~e~v~~g~g~~v~~-d~~~la~ 334 (375)
T 3beo_A 278 NVAARSYLMLTDS-----GGVQEEAPSLGV-----------------PVLVLRDTTERPEGIEAGTLKLAGT-DEETIFS 334 (375)
T ss_dssp HHHHTCSEEEECC-----HHHHHHHHHHTC-----------------CEEECSSCCSCHHHHHTTSEEECCS-CHHHHHH
T ss_pred HHHHhCcEEEECC-----CChHHHHHhcCC-----------------CEEEecCCCCCceeecCCceEEcCC-CHHHHHH
Confidence 9999999999999 667999999976 899996 477666663 4888887 9999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHH
Q 004314 505 AMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQ 542 (761)
Q Consensus 505 ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~ 542 (761)
+|.++++.+ +.++.+.++.+++...+++.+.++.+.+
T Consensus 335 ~i~~ll~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 371 (375)
T 3beo_A 335 LADELLSDK-EAHDKMSKASNPYGDGRASERIVEAILK 371 (375)
T ss_dssp HHHHHHHCH-HHHHHHCCCCCTTCCSCHHHHHHHHHHH
T ss_pred HHHHHHhCh-HhHhhhhhcCCCCCCCcHHHHHHHHHHH
Confidence 999999854 3444444456666666666666655543
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=6.7e-17 Score=180.52 Aligned_cols=160 Identities=9% Similarity=0.036 Sum_probs=122.7
Q ss_pred EEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCc-cccCChHHHHHHHHHHHHhCCCCcCceeEEEEe
Q 004314 300 GIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDM-DIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIA 378 (761)
Q Consensus 300 ~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRl-d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~ 378 (761)
.+.++|+|+|.+.|.... ....+++.|++++|+ .+.||+..+|+|++++.+++|+. .++.|+++|
T Consensus 218 ~~~~i~~g~d~~~~~~~~-------------~~~~~~~~il~~gr~~~~~Kg~~~li~A~~~l~~~~~~~-~~~~l~ivG 283 (413)
T 2x0d_A 218 DEYFFQPKINTTLKNYIN-------------DKRQKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRS-NEWKIISVG 283 (413)
T ss_dssp EEEEECCCCCHHHHTTTT-------------SCCCCCSEEEEEECTTCGGGCHHHHHHHHHHHHHHCTTG-GGCEEEEEE
T ss_pred ceEEeCCCcCchhhcccc-------------cccCCCCEEEEEecCchhccCHHHHHHHHHHHHHhCCCC-CceEEEEEc
Confidence 467889999987664210 012356788999996 68999999999999999888862 124488887
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecC
Q 004314 379 NPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQG 458 (761)
Q Consensus 379 ~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~ 458 (761)
... .. .+.+. ...|+|+ |.++.+|+.++|+.||+||+||..||||++++||||||.
T Consensus 284 ~~~-----~~---------------~~l~~--~~~v~f~-G~~~~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~G~- 339 (413)
T 2x0d_A 284 EKH-----KD---------------IALGK--GIHLNSL-GKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHFGL- 339 (413)
T ss_dssp SCC-----CC---------------EEEET--TEEEEEE-ESCCHHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHTTC-
T ss_pred CCc-----hh---------------hhcCC--cCcEEEc-CCCCHHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhCCC-
Confidence 421 10 01111 1246655 689999999999999999999999999999999999976
Q ss_pred CCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECCCCHHHHHHHHHHHHcCCH
Q 004314 459 VSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAIQMNE 514 (761)
Q Consensus 459 ~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~ 514 (761)
|+|++ .+|+.+.+. +|++|+|.|++++|++|.+++++++
T Consensus 340 ----------------PVV~~-~~g~~e~v~~~~~G~lv~~~d~~~la~ai~~ll~~~~ 381 (413)
T 2x0d_A 340 ----------------RVITN-KYENKDLSNWHSNIVSLEQLNPENIAETLVELCMSFN 381 (413)
T ss_dssp ----------------EEEEE-CBTTBCGGGTBTTEEEESSCSHHHHHHHHHHHHHHTC
T ss_pred ----------------cEEEe-CCCcchhhhcCCCEEEeCCCCHHHHHHHHHHHHcCHH
Confidence 88885 457777663 4899999999999999999998653
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=7.4e-17 Score=179.61 Aligned_cols=168 Identities=11% Similarity=0.045 Sum_probs=128.3
Q ss_pred EEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEec
Q 004314 300 GIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIAN 379 (761)
Q Consensus 300 ~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~ 379 (761)
++.++|+|||.+.|.+.... ...++++|+++||+.+.||+ ++.+.+++|+++ |+++|.
T Consensus 198 ~i~vipngvd~~~f~~~~~~------------~~~~~~~i~~vGrl~~~Kg~------~~~l~~~~~~~~----l~ivG~ 255 (406)
T 2hy7_A 198 NVFHVGHGVDHNLDQLGDPS------------PYAEGIHAVAVGSMLFDPEF------FVVASKAFPQVT----FHVIGS 255 (406)
T ss_dssp TEEECCCCBCTTHHHHHCSC------------SCCSSEEEEEECCTTBCHHH------HHHHHHHCTTEE----EEEESC
T ss_pred CEEEEcCCcChHhcCccccc------------ccCCCcEEEEEeccccccCH------HHHHHHhCCCeE----EEEEeC
Confidence 67899999999888653211 12345899999999999999 555666788765 888873
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhhe------
Q 004314 380 PARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYI------ 453 (761)
Q Consensus 380 p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eam------ 453 (761)
|+ +++ .|.. ..|+|+ |.++.+++.++|+.||++|+||..|||+++.+|||
T Consensus 256 -----g~------------~~~----~~l~--~~V~f~-G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eY 311 (406)
T 2hy7_A 256 -----GM------------GRH----PGYG--DNVIVY-GEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQY 311 (406)
T ss_dssp -----SS------------CCC----TTCC--TTEEEE-CCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHH
T ss_pred -----ch------------HHh----cCCC--CCEEEc-CCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHH
Confidence 32 111 1211 247765 68999999999999999999999999999999999
Q ss_pred -eeecCCCCCCCCCCCCCCCCceEEEcCCCCCcccccCcEE-ECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhC
Q 004314 454 -VCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLSGAIR-VNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTH 531 (761)
Q Consensus 454 -a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~-VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~ 531 (761)
|||. |+|+|+. ... -.+|++ |+|.|++++|++|.+++++++ +++...+
T Consensus 312 la~G~-----------------PVIas~~--v~~-~~~G~l~v~~~d~~~la~ai~~ll~~~~----------~~~~~~~ 361 (406)
T 2hy7_A 312 DFFGL-----------------PAVCPNA--VVG-PYKSRFGYTPGNADSVIAAITQALEAPR----------VRYRQCL 361 (406)
T ss_dssp HHHTC-----------------CEEEEGG--GTC-SCSSEEEECTTCHHHHHHHHHHHHHCCC----------CCCSCCC
T ss_pred hhCCC-----------------cEEEehh--ccc-CcceEEEeCCCCHHHHHHHHHHHHhCcc----------hhhhhcC
Confidence 9976 8999976 111 124888 999999999999999999875 1445678
Q ss_pred CHHHHHHHHHHH
Q 004314 532 DVAYWARSFFQD 543 (761)
Q Consensus 532 ~~~~Wa~~~l~~ 543 (761)
++...++++++.
T Consensus 362 sw~~~a~~~~~~ 373 (406)
T 2hy7_A 362 NWSDTTDRVLDP 373 (406)
T ss_dssp BHHHHHHHHHCG
T ss_pred CHHHHHHHHHHh
Confidence 888888877654
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.65 E-value=3.3e-16 Score=153.64 Aligned_cols=141 Identities=17% Similarity=0.200 Sum_probs=112.4
Q ss_pred CCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCcc
Q 004314 334 EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEP 413 (761)
Q Consensus 334 ~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~p 413 (761)
.++++|+++||+++.||+..+++|++++ |+++ |+++|.. ++.+++ .+++.++.... . ..
T Consensus 21 ~~~~~i~~~G~~~~~Kg~~~li~a~~~l----~~~~----l~i~G~~-----~~~~~l----~~~~~~~~~~l--~--~~ 79 (177)
T 2f9f_A 21 CYGDFWLSVNRIYPEKRIELQLEVFKKL----QDEK----LYIVGWF-----SKGDHA----ERYARKIMKIA--P--DN 79 (177)
T ss_dssp CCCSCEEEECCSSGGGTHHHHHHHHHHC----TTSC----EEEEBCC-----CTTSTH----HHHHHHHHHHS--C--TT
T ss_pred CCCCEEEEEeccccccCHHHHHHHHHhC----CCcE----EEEEecC-----ccHHHH----HHHHHhhhccc--C--Cc
Confidence 4678999999999999999999999876 5554 8878742 222233 33443111111 1 14
Q ss_pred EEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---C
Q 004314 414 VVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---G 490 (761)
Q Consensus 414 V~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ 490 (761)
|.++ +.++.+++..+|+.||++|+||..||||++++|||+||. |+|+|..+|..+.+. .
T Consensus 80 v~~~-g~~~~~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G~-----------------PvI~~~~~~~~e~i~~~~~ 141 (177)
T 2f9f_A 80 VKFL-GSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGK-----------------PVIAVNEGGFKETVINEKT 141 (177)
T ss_dssp EEEE-ESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTC-----------------CEEEESSHHHHHHCCBTTT
T ss_pred EEEe-CCCCHHHHHHHHHhCCEEEeCCCcCCCChHHHHHHHcCC-----------------cEEEeCCCCHHHHhcCCCc
Confidence 6655 689999999999999999999999999999999999976 999999888888773 4
Q ss_pred cEEECCCCHHHHHHHHHHHHcCCH
Q 004314 491 AIRVNPWNIEATAEAMHEAIQMNE 514 (761)
Q Consensus 491 al~VnP~d~~~~A~ai~~aL~m~~ 514 (761)
|+++ |.|+++++++|.+++++++
T Consensus 142 g~~~-~~d~~~l~~~i~~l~~~~~ 164 (177)
T 2f9f_A 142 GYLV-NADVNEIIDAMKKVSKNPD 164 (177)
T ss_dssp EEEE-CSCHHHHHHHHHHHHHCTT
T ss_pred cEEe-CCCHHHHHHHHHHHHhCHH
Confidence 8899 9999999999999999876
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=99.63 E-value=1.9e-15 Score=156.00 Aligned_cols=159 Identities=16% Similarity=0.233 Sum_probs=114.0
Q ss_pred ceeEEecCCCcCCCCCC--CCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCCCceEEccCCeEEeecCCc
Q 004314 591 SRAILFDYDGTVMPQTS--INKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADE 668 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~--~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~~l~liaehGa~ir~~~~~ 668 (761)
.|+|++|+||||++... ....++++++++|++|++. + .|+|+|||++..+.+++..+ +++|++||+.++..+
T Consensus 1 ikli~~DlDGTLl~~~~~~~~~~i~~~~~~al~~l~~~-g-~v~iaTGR~~~~~~~~~~~l--~~~I~~nGa~i~~~~-- 74 (239)
T 1u02_A 1 MSLIFLDYDGTLVPIIMNPEESYADAGLLSLISDLKER-F-DTYIVTGRSPEEISRFLPLD--INMICYHGACSKING-- 74 (239)
T ss_dssp -CEEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHHHHH-S-EEEEECSSCHHHHHHHSCSS--CEEEEGGGTEEEETT--
T ss_pred CeEEEEecCCCCcCCCCCcccCCCCHHHHHHHHHHhcC-C-CEEEEeCCCHHHHHHHhccc--hheEEECCEEEeeCC--
Confidence 37999999999998532 3557899999999999975 7 99999999999999999876 789999999998842
Q ss_pred ceeecCc-CcCcchH-HHHHHHHHHHhcCCCccEEEecCceEEEEcccCCCCCchHHHHHHHHHHHHHhcCCCcEEEeCC
Q 004314 669 EWQNCGQ-SVDFGWI-QIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQ 746 (761)
Q Consensus 669 ~w~~~~~-~~~~~w~-~~v~~im~~y~~~t~Gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~~v~V~~G~ 746 (761)
++....+ .....+. +.+..+++... ..++.+++.++..+.+||+..++ +.....+++.+.+.+. ..+.+.+|.
T Consensus 75 ~~~~~~~~~~~~~l~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~---~~~~~~~~~ 149 (239)
T 1u02_A 75 QIVYNNGSDRFLGVFDRIYEDTRSWVS-DFPGLRIYRKNLAVLYHLGLMGA-DMKPKLRSRIEEIARI---FGVETYYGK 149 (239)
T ss_dssp EEEECTTGGGGHHHHHHHHHHHTTHHH-HSTTCEEEEETTEEEEECTTSCS-TTHHHHHHHHHHHHHH---HTCEEEECS
T ss_pred eeeecccccccchhhHHHHHHHHHHHh-hCCCcEEEecCCEEEEEcCCCCh-hHHHHHHHHHHHHhcc---CCcEEEeCC
Confidence 3311000 0012222 34445554433 34688899999999999987643 2223344555555543 236678899
Q ss_pred eEEEEEeCCCCcCC
Q 004314 747 FIVEVKPQVYIQLR 760 (761)
Q Consensus 747 ~~vEV~p~gvnKG~ 760 (761)
.++||.|+++|||.
T Consensus 150 ~~lei~~~~~~Kg~ 163 (239)
T 1u02_A 150 MIIELRVPGVNKGS 163 (239)
T ss_dssp SEEEEECTTCCHHH
T ss_pred cEEEEEcCCCCHHH
Confidence 99999999999984
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=3.2e-15 Score=172.75 Aligned_cols=199 Identities=13% Similarity=0.056 Sum_probs=148.8
Q ss_pred EEEEeccccCcccchhhhccchHHHHHHHHHHHc--CCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEE
Q 004314 300 GIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF--EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQI 377 (761)
Q Consensus 300 ~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~--~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi 377 (761)
++.++|+++++....+.... ...|+++ ++.+++++++|+.+ ||+..+++|+.++++++|+++ |+++
T Consensus 345 ~i~~ipn~~~~~~~~~~~~~-------~~~r~~~~~~~~~~v~~~g~~~~-K~~~~li~a~~~l~~~~~~~~----l~i~ 412 (568)
T 2vsy_A 345 HVLRLQGAFQPSDTSRVVAE-------PPSRTQCGLPEQGVVLCCFNNSY-KLNPQSMARMLAVLREVPDSV----LWLL 412 (568)
T ss_dssp EEEECSSCSCCCCTTCCCCC-------CCCTGGGTCCTTSCEEEECCCGG-GCCHHHHHHHHHHHHHCTTCE----EEEE
T ss_pred eeEcCCCcCCCCCCCCCCCC-------CCCccccCCCCCCEEEEeCCccc-cCCHHHHHHHHHHHHhCCCcE----EEEe
Confidence 67788986554322110000 0123344 34557789999999 999999999999999999876 8877
Q ss_pred ecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeec
Q 004314 378 ANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQ 457 (761)
Q Consensus 378 ~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~ 457 (761)
|. +++.. +++++++.+.+.. ...|+|+ |.++.+++..+|+.|||||+||.+ |||++.+|||+||.
T Consensus 413 G~----~g~~~----~~l~~~~~~~~l~-----~~~v~~~-g~~~~~~~~~~~~~adv~v~ps~~-~~g~~~lEAma~G~ 477 (568)
T 2vsy_A 413 SG----PGEAD----ARLRAFAHAQGVD-----AQRLVFM-PKLPHPQYLARYRHADLFLDTHPY-NAHTTASDALWTGC 477 (568)
T ss_dssp CC----STTHH----HHHHHHHHHTTCC-----GGGEEEE-CCCCHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTTC
T ss_pred cC----CHHHH----HHHHHHHHHcCCC-----hhHEEee-CCCCHHHHHHHHhcCCEEeeCCCC-CCcHHHHHHHhCCC
Confidence 72 24433 4445555544311 1247655 689999999999999999999999 99999999999976
Q ss_pred CCCCCCCCCCCCCCCCceEEE-------cCCC-------CCcccccCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHH
Q 004314 458 GVSGSESSSESSAPKKSMLVV-------SEFI-------GCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEK 523 (761)
Q Consensus 458 ~~~~~~~~~~~~~~~~g~lV~-------Se~~-------G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~ 523 (761)
|+|+ |+.+ |+.+.+.+ |+++++++|.++++.+ +.++...++
T Consensus 478 -----------------Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~~-------~~~~la~~i~~l~~~~-~~~~~~~~~ 532 (568)
T 2vsy_A 478 -----------------PVLTTPGETFAARVAGSLNHHLGLDEMNVA-------DDAAFVAKAVALASDP-AALTALHAR 532 (568)
T ss_dssp -----------------CEEBCCCSSGGGSHHHHHHHHHTCGGGBCS-------SHHHHHHHHHHHHHCH-HHHHHHHHH
T ss_pred -----------------CEEeccCCCchHHHHHHHHHHCCChhhhcC-------CHHHHHHHHHHHhcCH-HHHHHHHHH
Confidence 9999 9988 88877643 8999999999999865 355556667
Q ss_pred HhhHH---hhCCHHHHHHHHHHHHHHHHHh
Q 004314 524 HYRYV---STHDVAYWARSFFQDMERTCKD 550 (761)
Q Consensus 524 ~~~~v---~~~~~~~Wa~~~l~~l~~~~~~ 550 (761)
.++.+ ..+++...++.+.+.+++..+.
T Consensus 533 ~~~~~~~~~~f~~~~~~~~~~~~y~~~~~~ 562 (568)
T 2vsy_A 533 VDVLRRASGVFHMDGFADDFGALLQALARR 562 (568)
T ss_dssp HHHHHHHSSTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHhhhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 78887 6789999999998888876654
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.60 E-value=9.8e-15 Score=159.44 Aligned_cols=244 Identities=15% Similarity=0.157 Sum_probs=154.3
Q ss_pred HHHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHh--hhcCEEeeeCHHHHH
Q 004314 192 RVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKAL--LNADLIGFHTFDYAR 269 (761)
Q Consensus 192 ~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~l--l~~DligF~t~~~~~ 269 (761)
++++..+| |+|++|++....++..+..+..++|+. ..|.++.+...+. ++.....+.+ ..+|.+...+....+
T Consensus 85 ~~l~~~~p--Dvv~~~~~~~~~~~~~~~a~~~~ip~v-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~s~~~~~ 159 (376)
T 1v4v_A 85 RALKEMGA--DYVLVHGDTLTTFAVAWAAFLEGIPVG-HVEAGLRSGNLKE--PFPEEANRRLTDVLTDLDFAPTPLAKA 159 (376)
T ss_dssp HHHHHTTC--SEEEEESSCHHHHHHHHHHHHTTCCEE-EETCCCCCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHH
T ss_pred HHHHHcCC--CEEEEeCChHHHHHHHHHHHHhCCCEE-EEeCCCccccccC--CCchHHHHHHHHHHhceeeCCCHHHHH
Confidence 34455576 899999876555554443444578875 4555543222221 2223333332 247888888877666
Q ss_pred HHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccc-cCcccchhhhccchHHHHHHHHHHHcC-CCeEEEeecCccc
Q 004314 270 HFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVG-IHMGQIESVLRLADKDWRVQELKQQFE-GKTVLLGVDDMDI 347 (761)
Q Consensus 270 ~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~G-Id~~~f~~~~~~~~~~~~~~~lr~~~~-~~~vil~VdRld~ 347 (761)
.|.+ .|.. ..++.++|++ +|...+... ..+++++++ ++.++++++|+..
T Consensus 160 ~l~~-----~g~~---------------~~ki~vi~n~~~d~~~~~~~---------~~~~~~~~~~~~~vl~~~gr~~~ 210 (376)
T 1v4v_A 160 NLLK-----EGKR---------------EEGILVTGQTGVDAVLLAAK---------LGRLPEGLPEGPYVTVTMHRREN 210 (376)
T ss_dssp HHHT-----TTCC---------------GGGEEECCCHHHHHHHHHHH---------HCCCCTTCCSSCEEEECCCCGGG
T ss_pred HHHH-----cCCC---------------cceEEEECCchHHHHhhhhh---------hhHHHHhcCCCCEEEEEeCcccc
Confidence 6542 1321 1135566765 453222110 011233343 3456778999999
Q ss_pred cCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHH
Q 004314 348 FKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERA 427 (761)
Q Consensus 348 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~ 427 (761)
.||+..+++|++++.+++|+++ |+.++++ ++ +++++++++++. ...|+++ +.++..++.
T Consensus 211 ~k~~~~ll~a~~~l~~~~~~~~----lv~~~g~----~~---~~~~~l~~~~~~---------~~~v~~~-g~~g~~~~~ 269 (376)
T 1v4v_A 211 WPLLSDLAQALKRVAEAFPHLT----FVYPVHL----NP---VVREAVFPVLKG---------VRNFVLL-DPLEYGSMA 269 (376)
T ss_dssp GGGHHHHHHHHHHHHHHCTTSE----EEEECCS----CH---HHHHHHHHHHTT---------CTTEEEE-CCCCHHHHH
T ss_pred hHHHHHHHHHHHHHHhhCCCeE----EEEECCC----CH---HHHHHHHHHhcc---------CCCEEEE-CCCCHHHHH
Confidence 9999999999999998898764 6554322 22 234455554321 1247765 577788999
Q ss_pred HHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcC-CCCCccccc--CcEEECCCCHHHHHH
Q 004314 428 AYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSE-FIGCSPSLS--GAIRVNPWNIEATAE 504 (761)
Q Consensus 428 aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se-~~G~~~~l~--~al~VnP~d~~~~A~ 504 (761)
.+|+.||++|.+| +|+ .+|||+||. |+|++. .+|+.+.+. .|++|+ .|++++|+
T Consensus 270 ~~~~~ad~~v~~S--~g~---~lEA~a~G~-----------------PvI~~~~~~~~~~~~~~g~g~lv~-~d~~~la~ 326 (376)
T 1v4v_A 270 ALMRASLLLVTDS--GGL---QEEGAALGV-----------------PVVVLRNVTERPEGLKAGILKLAG-TDPEGVYR 326 (376)
T ss_dssp HHHHTEEEEEESC--HHH---HHHHHHTTC-----------------CEEECSSSCSCHHHHHHTSEEECC-SCHHHHHH
T ss_pred HHHHhCcEEEECC--cCH---HHHHHHcCC-----------------CEEeccCCCcchhhhcCCceEECC-CCHHHHHH
Confidence 9999999999999 554 789999976 888774 455555443 478886 49999999
Q ss_pred HHHHHHcCC
Q 004314 505 AMHEAIQMN 513 (761)
Q Consensus 505 ai~~aL~m~ 513 (761)
+|.++|+.+
T Consensus 327 ~i~~ll~d~ 335 (376)
T 1v4v_A 327 VVKGLLENP 335 (376)
T ss_dssp HHHHHHTCH
T ss_pred HHHHHHhCh
Confidence 999999854
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=1.2e-14 Score=157.84 Aligned_cols=257 Identities=13% Similarity=0.028 Sum_probs=162.8
Q ss_pred HHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHH
Q 004314 193 VIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFL 272 (761)
Q Consensus 193 i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl 272 (761)
+++..+| |+|++|.....+ +..+..+..++|+.++.|..+|.. ...++ .-.+|.+...+.
T Consensus 91 ~l~~~~p--Dvv~~~~~~~~~-~~~~~~~~~~~p~v~~~~~~~~~~--------~~~~~--~~~~d~v~~~~~------- 150 (364)
T 1f0k_A 91 IMKAYKP--DVVLGMGGYVSG-PGGLAAWSLGIPVVLHEQNGIAGL--------TNKWL--AKIATKVMQAFP------- 150 (364)
T ss_dssp HHHHHCC--SEEEECSSTTHH-HHHHHHHHTTCCEEEEECSSSCCH--------HHHHH--TTTCSEEEESST-------
T ss_pred HHHhcCC--CEEEEeCCcCch-HHHHHHHHcCCCEEEEecCCCCcH--------HHHHH--HHhCCEEEecCh-------
Confidence 3444566 899999754333 333333345788888888766531 01111 012444432111
Q ss_pred HHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc-CCCe-EEEeecCccccCC
Q 004314 273 SCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF-EGKT-VLLGVDDMDIFKG 350 (761)
Q Consensus 273 ~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~-~~~~-vil~VdRld~~KG 350 (761)
. . + . ++.++|+|||.+.|.+. .. ..++ .. ++++ +++.+||+.+.||
T Consensus 151 --------------~-~----~-~---~~~~i~n~v~~~~~~~~----~~---~~~~--~~~~~~~~il~~~g~~~~~k~ 198 (364)
T 1f0k_A 151 --------------G-A----F-P---NAEVVGNPVRTDVLALP----LP---QQRL--AGREGPVRVLVVGGSQGARIL 198 (364)
T ss_dssp --------------T-S----S-S---SCEECCCCCCHHHHTSC----CH---HHHH--TTCCSSEEEEEECTTTCCHHH
T ss_pred --------------h-h----c-C---CceEeCCccchhhcccc----hh---hhhc--ccCCCCcEEEEEcCchHhHHH
Confidence 0 0 1 1 35688999998766431 11 1111 12 3445 5556689999999
Q ss_pred hHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHH
Q 004314 351 VDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYY 430 (761)
Q Consensus 351 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly 430 (761)
+..+++|++++.+ ++.++.+++ +++ .+ ++.+++++.+ ...|.++ +.+ +++..+|
T Consensus 199 ~~~li~a~~~l~~-------~~~~l~i~G----~~~-~~----~l~~~~~~~~-------~~~v~~~-g~~--~~~~~~~ 252 (364)
T 1f0k_A 199 NQTMPQVAAKLGD-------SVTIWHQSG----KGS-QQ----SVEQAYAEAG-------QPQHKVT-EFI--DDMAAAY 252 (364)
T ss_dssp HHHHHHHHHHHGG-------GEEEEEECC----TTC-HH----HHHHHHHHTT-------CTTSEEE-SCC--SCHHHHH
T ss_pred HHHHHHHHHHhcC-------CcEEEEEcC----Cch-HH----HHHHHHhhcC-------CCceEEe-cch--hhHHHHH
Confidence 9999999998743 233433432 222 23 3444444432 1246665 455 7899999
Q ss_pred HhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCcc-------cc-c--CcEEECCCC--
Q 004314 431 TIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSP-------SL-S--GAIRVNPWN-- 498 (761)
Q Consensus 431 ~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~-------~l-~--~al~VnP~d-- 498 (761)
+.||++|+|| | +++++|||+||. |+|+|..+|... .+ . .|++++|.|
T Consensus 253 ~~ad~~v~~s---g-~~~~~EAma~G~-----------------Pvi~~~~~g~~~~q~~~~~~~~~~g~g~~~~~~d~~ 311 (364)
T 1f0k_A 253 AWADVVVCRS---G-ALTVSEIAAAGL-----------------PALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLS 311 (364)
T ss_dssp HHCSEEEECC---C-HHHHHHHHHHTC-----------------CEEECCCCCTTCHHHHHHHHHHHTTSEEECCGGGCC
T ss_pred HhCCEEEECC---c-hHHHHHHHHhCC-----------------CEEEeeCCCCchhHHHHHHHHHhCCcEEEeccccCC
Confidence 9999999999 4 899999999976 999999987632 33 2 489999988
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHHHHHHHHHhh
Q 004314 499 IEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERTCKDH 551 (761)
Q Consensus 499 ~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l~~~~~~~ 551 (761)
++++|++|.++ .++.++.+.++.++++..+++..-++.+++.+++..+.|
T Consensus 312 ~~~la~~i~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~ 361 (364)
T 1f0k_A 312 VDAVANTLAGW---SRETLLTMAERARAASIPDATERVANEVSRVARALEHHH 361 (364)
T ss_dssp HHHHHHHHHTC---CHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHTTC----
T ss_pred HHHHHHHHHhc---CHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHhhc
Confidence 99999999987 455666666677888888888887887777666654443
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=7.1e-14 Score=153.87 Aligned_cols=250 Identities=10% Similarity=0.017 Sum_probs=158.4
Q ss_pred HHHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHH-hhhcCEEeeeCHHHHHH
Q 004314 192 RVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKA-LLNADLIGFHTFDYARH 270 (761)
Q Consensus 192 ~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~-ll~~DligF~t~~~~~~ 270 (761)
++++..+| |+|+++.++++ |.++.... . |+.+..+. +.. +. +.+. +-.+|.|.+++...++.
T Consensus 105 ~~l~~~~p--Div~~~~~~~~--~~~~~~~~-~-p~~~~~~~-~~~---------~~-~~~~~~~~~d~ii~~S~~~~~~ 167 (374)
T 2xci_A 105 RFEELSKP--KALIVVEREFW--PSLIIFTK-V-PKILVNAY-AKG---------SL-IEKILSKKFDLIIMRTQEDVEK 167 (374)
T ss_dssp HHHHHHCC--SEEEEESCCCC--HHHHHHCC-S-CEEEEEEC-CCC---------CH-HHHHHHTTCSEEEESCHHHHHH
T ss_pred HHHHHhCC--CEEEEECccCc--HHHHHHHh-C-CEEEEEee-cCc---------hH-HHHHHHHhCCEEEECCHHHHHH
Confidence 34556677 89998877765 33443221 2 55443332 211 11 2222 34689999999988877
Q ss_pred HHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCC
Q 004314 271 FLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKG 350 (761)
Q Consensus 271 Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KG 350 (761)
|.+ +|. . +|.++|+|. |..... + ++.+. +++++++++. .||
T Consensus 168 l~~-----~g~---------------~--ki~vi~n~~----f~~~~~-~---------~~~l~-~~vi~~~~~~--~k~ 208 (374)
T 2xci_A 168 FKT-----FGA---------------K--RVFSCGNLK----FICQKG-K---------GIKLK-GEFIVAGSIH--TGE 208 (374)
T ss_dssp HHT-----TTC---------------C--SEEECCCGG----GCCCCC-S---------CCCCS-SCEEEEEEEC--GGG
T ss_pred HHH-----cCC---------------C--eEEEcCCCc----cCCCcC-h---------hhhhc-CCEEEEEeCC--Cch
Confidence 642 132 1 456677762 221100 0 00111 2577777764 589
Q ss_pred hHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccC--CCCCccEEEEcCCCCHHHHHH
Q 004314 351 VDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFG--RPGYEPVVFIDKPVTLSERAA 428 (761)
Q Consensus 351 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g--~~~~~pV~~~~~~v~~~el~a 428 (761)
+..+++|+.++.+++|+++ |+++| ++++.. +++++++++.+-.+. ..+...|. +.+. .+|+..
T Consensus 209 ~~~ll~A~~~l~~~~p~~~----lvivG-----~g~~~~---~~l~~~~~~~gl~~~~~~~~~~~v~-~~~~--~~dl~~ 273 (374)
T 2xci_A 209 VEIILKAFKEIKKTYSSLK----LILVP-----RHIENA---KIFEKKARDFGFKTSFFENLEGDVI-LVDR--FGILKE 273 (374)
T ss_dssp HHHHHHHHHHHHTTCTTCE----EEEEE-----SSGGGH---HHHHHHHHHTTCCEEETTCCCSSEE-ECCS--SSCHHH
T ss_pred HHHHHHHHHHHHhhCCCcE----EEEEC-----CCHHHH---HHHHHHHHHCCCceEEecCCCCcEE-EECC--HHHHHH
Confidence 9999999999998899876 88777 345431 233444444432210 00001344 4442 478999
Q ss_pred HHHhcccceecc-cccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEc-CCCCCcccc----cCcEEECCCCHHHH
Q 004314 429 YYTIAECVVVTA-VRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVS-EFIGCSPSL----SGAIRVNPWNIEAT 502 (761)
Q Consensus 429 ly~~ADv~vvtS-~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~S-e~~G~~~~l----~~al~VnP~d~~~~ 502 (761)
+|+.||+++++| ..|++|++++||||||. |+|++ +..|+.+.+ .+|.++.|.|++++
T Consensus 274 ~y~~aDv~vl~ss~~e~gg~~~lEAmA~G~-----------------PVI~~~~~~~~~e~~~~~~~~G~l~~~~d~~~L 336 (374)
T 2xci_A 274 LYPVGKIAIVGGTFVNIGGHNLLEPTCWGI-----------------PVIYGPYTHKVNDLKEFLEKEGAGFEVKNETEL 336 (374)
T ss_dssp HGGGEEEEEECSSSSSSCCCCCHHHHTTTC-----------------CEEECSCCTTSHHHHHHHHHTTCEEECCSHHHH
T ss_pred HHHhCCEEEECCcccCCCCcCHHHHHHhCC-----------------CEEECCCccChHHHHHHHHHCCCEEEeCCHHHH
Confidence 999999988875 55788999999999976 88876 566777654 35788889999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHhhHHhhC
Q 004314 503 AEAMHEAIQMNEAEKQLRHEKHYRYVSTH 531 (761)
Q Consensus 503 A~ai~~aL~m~~~er~~r~~~~~~~v~~~ 531 (761)
|++|.++|+. +.++.+.++.++++.++
T Consensus 337 a~ai~~ll~d--~~r~~mg~~ar~~~~~~ 363 (374)
T 2xci_A 337 VTKLTELLSV--KKEIKVEEKSREIKGCY 363 (374)
T ss_dssp HHHHHHHHHS--CCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhH--HHHHHHHHHHHHHHHhc
Confidence 9999999985 45566666677777543
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=4.1e-14 Score=146.85 Aligned_cols=167 Identities=17% Similarity=0.140 Sum_probs=110.3
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC---CCceEEccCCeEEeecC
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC---KKLGIAAEHGYFMRWSA 666 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~---~~l~liaehGa~ir~~~ 666 (761)
+.|+|++|+||||++ ....++++++++|++|.+ +++.|+|+|||++..+.+.|+.- ...++|++||+.+...+
T Consensus 3 ~~kli~~DlDGTLl~---~~~~i~~~~~~~l~~l~~-~g~~~~iaTGR~~~~~~~~l~~~~~~~~~~~i~~NGa~i~~~~ 78 (246)
T 3f9r_A 3 KRVLLLFDVDGTLTP---PRLCQTDEMRALIKRARG-AGFCVGTVGGSDFAKQVEQLGRDVLTQFDYVFAENGLLAYRNG 78 (246)
T ss_dssp CSEEEEECSBTTTBS---TTSCCCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHCTTHHHHCSEEEEGGGTEEEETT
T ss_pred CceEEEEeCcCCcCC---CCCccCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHhhhhccccCCEEEECCCcEEEECC
Confidence 468999999999998 355788999999999996 68999999999999999998731 11468999999999874
Q ss_pred CcceeecCc-CcCcchHHHHHHHHHHH-----hcCCCccEEEecCceEEEE--cccCCC----CCc---hH--HHHHHHH
Q 004314 667 DEEWQNCGQ-SVDFGWIQIAEPVMKLY-----TESTDGSYIEIKESALVWH--HRDADP----GFG---SS--QAKELLD 729 (761)
Q Consensus 667 ~~~w~~~~~-~~~~~w~~~v~~im~~y-----~~~t~Gs~iE~k~~~l~~h--yr~ad~----d~~---~~--qa~el~~ 729 (761)
+..|....+ ..+.++...+...++.+ .....|.|++.+...+.+. .+.... .+. .. ...++.+
T Consensus 79 ~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (246)
T 3f9r_A 79 LEIHRQSLLNALGNDRIVKFVKKTLRLIADLDIPVQRGTFVEYRNGMINVSPIGRNCSQAERDEFEVYDNEHRVRASLIA 158 (246)
T ss_dssp EEEEECCHHHHTCHHHHHHHHHHHHHHHHTCCCSCCCSCCEEECSSCEEECSSCTTSCHHHHHHHHHHHHHHCHHHHHHH
T ss_pred EEEEEeeccccCCHHHHHHHHHHHHhhhhceeeecCCceEEEeecceeccccccccCchhhceeeeEecccchHHHHHHH
Confidence 444443211 01122222233332222 2345688998877665542 111110 010 11 1235556
Q ss_pred HHHHHhcCCCcE-EEeCCeEEEEEeCCCCcCC
Q 004314 730 HLESVLANEPAA-VKSGQFIVEVKPQVYIQLR 760 (761)
Q Consensus 730 ~L~~~l~~~~v~-V~~G~~~vEV~p~gvnKG~ 760 (761)
.|.+.+.+..+. +.+|..++||.|+|+|||.
T Consensus 159 ~l~~~~~~~~~~~~~sg~~~leI~~~gv~Kg~ 190 (246)
T 3f9r_A 159 ELENSFPDFGLKYSIGGQISFDVFPVGWDKTY 190 (246)
T ss_dssp HHHHHCGGGCEEEEEETTTEEEEEETTCSGGG
T ss_pred HHHhhCcCCcEEEEecCCeEEEEEeCCCCHHH
Confidence 666665554455 5679999999999999995
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.44 E-value=3.5e-12 Score=141.43 Aligned_cols=252 Identities=16% Similarity=0.134 Sum_probs=158.9
Q ss_pred HHHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHh--hhcCEEeeeCHHHHH
Q 004314 192 RVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKAL--LNADLIGFHTFDYAR 269 (761)
Q Consensus 192 ~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~l--l~~DligF~t~~~~~ 269 (761)
++++..+| |+|++|+.-...+|..+..+..++|+++ .|.+..+...+ -|+.+++.+.+ ..+|++-..+....+
T Consensus 105 ~~l~~~kP--DvVi~~g~~~~~~~~~~aa~~~~IPv~h-~~ag~rs~~~~--~~~~~~~~r~~~~~~a~~~~~~se~~~~ 179 (396)
T 3dzc_A 105 QVLSSEQP--DVVLVHGDTATTFAASLAAYYQQIPVGH-VEAGLRTGNIY--SPWPEEGNRKLTAALTQYHFAPTDTSRA 179 (396)
T ss_dssp HHHHHHCC--SEEEEETTSHHHHHHHHHHHTTTCCEEE-ETCCCCCSCTT--SSTTHHHHHHHHHHTCSEEEESSHHHHH
T ss_pred HHHHhcCC--CEEEEECCchhHHHHHHHHHHhCCCEEE-EECCccccccc--cCCcHHHHHHHHHHhcCEEECCCHHHHH
Confidence 34455677 8999998766666655555566888764 34333332222 24456666665 357999889988888
Q ss_pred HHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEecc-ccCcccchhhhccchHHHHHHHHHHHcC----CCeE-EEeec
Q 004314 270 HFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPV-GIHMGQIESVLRLADKDWRVQELKQQFE----GKTV-LLGVD 343 (761)
Q Consensus 270 ~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~-GId~~~f~~~~~~~~~~~~~~~lr~~~~----~~~v-il~Vd 343 (761)
+|.. .|... .+|.++++ ++|...+..... ........+++++++ ++++ ++...
T Consensus 180 ~l~~-----~G~~~---------------~ki~vvGn~~~d~~~~~~~~~-~~~~~~~~~~r~~lg~l~~~~~~vlv~~h 238 (396)
T 3dzc_A 180 NLLQ-----ENYNA---------------ENIFVTGNTVIDALLAVREKI-HTDMDLQATLESQFPMLDASKKLILVTGH 238 (396)
T ss_dssp HHHH-----TTCCG---------------GGEEECCCHHHHHHHHHHHHH-HHCHHHHHHHHHTCTTCCTTSEEEEEECS
T ss_pred HHHH-----cCCCc---------------CcEEEECCcHHHHHHHhhhhc-ccchhhHHHHHHHhCccCCCCCEEEEEEC
Confidence 8764 24321 12344443 556433221100 000011256677663 3454 45566
Q ss_pred Cccc-cCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCC
Q 004314 344 DMDI-FKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVT 422 (761)
Q Consensus 344 Rld~-~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~ 422 (761)
|... .||+..+++|++++.+++|+++ +|.++.+ ++ .+++.++++. + . ...|.++ ++++
T Consensus 239 R~~~~~~~~~~ll~A~~~l~~~~~~~~----~v~~~g~----~~---~~~~~l~~~~---~----~--~~~v~~~-~~lg 297 (396)
T 3dzc_A 239 RRESFGGGFERICQALITTAEQHPECQ----ILYPVHL----NP---NVREPVNKLL---K----G--VSNIVLI-EPQQ 297 (396)
T ss_dssp CBCCCTTHHHHHHHHHHHHHHHCTTEE----EEEECCB----CH---HHHHHHHHHT---T----T--CTTEEEE-CCCC
T ss_pred CcccchhHHHHHHHHHHHHHHhCCCce----EEEEeCC----Ch---HHHHHHHHHH---c----C--CCCEEEe-CCCC
Confidence 7554 4889999999999999999864 5554322 12 2334444331 1 1 2357655 5788
Q ss_pred HHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEc-CCCCCccccc-C-cEEECCCCH
Q 004314 423 LSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVS-EFIGCSPSLS-G-AIRVNPWNI 499 (761)
Q Consensus 423 ~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~S-e~~G~~~~l~-~-al~VnP~d~ 499 (761)
..++..+|+.||++|.+| | |++ .||++||. |+|++ +.++..+.+. | +++|.+ |.
T Consensus 298 ~~~~~~l~~~ad~vv~~S---G-g~~-~EA~a~G~-----------------PvV~~~~~~~~~e~v~~G~~~lv~~-d~ 354 (396)
T 3dzc_A 298 YLPFVYLMDRAHIILTDS---G-GIQ-EEAPSLGK-----------------PVLVMRETTERPEAVAAGTVKLVGT-NQ 354 (396)
T ss_dssp HHHHHHHHHHCSEEEESC---S-GGG-TTGGGGTC-----------------CEEECCSSCSCHHHHHHTSEEECTT-CH
T ss_pred HHHHHHHHHhcCEEEECC---c-cHH-HHHHHcCC-----------------CEEEccCCCcchHHHHcCceEEcCC-CH
Confidence 889999999999999998 6 655 99999976 78888 5666555452 4 666665 89
Q ss_pred HHHHHHHHHHHcCC
Q 004314 500 EATAEAMHEAIQMN 513 (761)
Q Consensus 500 ~~~A~ai~~aL~m~ 513 (761)
++++++|.++|+.+
T Consensus 355 ~~l~~ai~~ll~d~ 368 (396)
T 3dzc_A 355 QQICDALSLLLTDP 368 (396)
T ss_dssp HHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHcCH
Confidence 99999999999864
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=99.43 E-value=1.3e-12 Score=134.99 Aligned_cols=164 Identities=16% Similarity=0.221 Sum_probs=101.7
Q ss_pred ccceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC-C--CCceEEccCCeEEeec
Q 004314 589 SKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP-C--KKLGIAAEHGYFMRWS 665 (761)
Q Consensus 589 s~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~-~--~~l~liaehGa~ir~~ 665 (761)
.+.|+|++|+||||++. +...+++++++|++|.+ . +.|+|+|||+...+.+.++. + ..-++|++||+.+...
T Consensus 4 ~~~kli~~DlDGTLl~~---~~~i~~~~~~al~~l~~-~-i~v~iaTGR~~~~~~~~l~~~~~~~~~~~I~~NGa~i~~~ 78 (246)
T 2amy_A 4 PGPALCLFDVDGTLTAP---RQKITKEMDDFLQKLRQ-K-IKIGVVGGSDFEKVQEQLGNDVVEKYDYVFPENGLVAYKD 78 (246)
T ss_dssp CCSEEEEEESBTTTBCT---TSCCCHHHHHHHHHHTT-T-SEEEEECSSCHHHHHHHHCTTHHHHCSEEESGGGTEEEET
T ss_pred CCceEEEEECCCCcCCC---CcccCHHHHHHHHHHHh-C-CeEEEEcCCCHHHHHHHhccccccccCEEEECCCcEEEeC
Confidence 46799999999999983 45688999999999985 5 99999999999988888862 2 1135899999999875
Q ss_pred CCcceeecCc-CcCcchHHHHHHHHHH---H-----hcCCCccEEEecCceEEEEc--ccCCC----CC---c--hHHHH
Q 004314 666 ADEEWQNCGQ-SVDFGWIQIAEPVMKL---Y-----TESTDGSYIEIKESALVWHH--RDADP----GF---G--SSQAK 725 (761)
Q Consensus 666 ~~~~w~~~~~-~~~~~w~~~v~~im~~---y-----~~~t~Gs~iE~k~~~l~~hy--r~ad~----d~---~--~~qa~ 725 (761)
++..|....+ ..+ .+.+..+++. + ....++.|++.+...+.++. +.... .+ . .....
T Consensus 79 ~~~i~~~~l~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (246)
T 2amy_A 79 GKLLCRQNIQSHLG---EALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQ 155 (246)
T ss_dssp TEEEEECCHHHHHC---HHHHHHHHHHHHHHHHHCCCSCCCSCSEEEETTEEEECSSCTTCCHHHHHHHHHHHHHHCHHH
T ss_pred CcEEEeeecccccC---HHHHHHHHHHHHhcCceEEEecCCceeEecccceeehhhhcCcCchhhhhhheeecCCHHHHH
Confidence 4333332100 001 2333333322 1 12345677765543333221 11110 00 0 00122
Q ss_pred HHHHHHHHHhcCCCcEEE-eCCeEEEEEeCCCCcCC
Q 004314 726 ELLDHLESVLANEPAAVK-SGQFIVEVKPQVYIQLR 760 (761)
Q Consensus 726 el~~~L~~~l~~~~v~V~-~G~~~vEV~p~gvnKG~ 760 (761)
++.+.+.+.+.+..+.+. +|..++||.|+|+|||.
T Consensus 156 ~~~~~l~~~~~~~~~~~~~s~~~~leI~~~~~~Kg~ 191 (246)
T 2amy_A 156 KFVADLRKEFAGKGLTFSIGGQISFDVFPDGWDKRY 191 (246)
T ss_dssp HHHHHHHHHTTTSCEEEEEETTTEEEEEETTCSGGG
T ss_pred HHHHHHHHhcCCCcEEEEEcCCcEEEEecCCCchHH
Confidence 344455554443346665 48899999999999995
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=1e-12 Score=137.26 Aligned_cols=169 Identities=17% Similarity=0.182 Sum_probs=100.3
Q ss_pred HHHHhccceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC-----CCceEEccC
Q 004314 584 SAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC-----KKLGIAAEH 658 (761)
Q Consensus 584 ~~y~~s~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~-----~~l~liaeh 658 (761)
.+|+..+.|+|++|+||||++. +...+++++++|++|.+ . +.|+|+|||++..+.+.++.. ..-++|++|
T Consensus 6 ~~~~~~~~kli~~DlDGTLl~~---~~~is~~~~~al~~l~~-~-i~v~iaTGR~~~~~~~~l~~~~~~~~~~~~~I~~N 80 (262)
T 2fue_A 6 QAARRKERVLCLFDVDGTLTPA---RQKIDPEVAAFLQKLRS-R-VQIGVVGGSDYCKIAEQLGDGDEVIEKFDYVFAEN 80 (262)
T ss_dssp -------CEEEEEESBTTTBST---TSCCCHHHHHHHHHHTT-T-SEEEEECSSCHHHHHHHHSSTTTHHHHCSEEEEGG
T ss_pred ccccccCeEEEEEeCccCCCCC---CCcCCHHHHHHHHHHHh-C-CEEEEEcCCCHHHHHHHHhhhhcccccCCeEEECC
Confidence 4667778999999999999983 45688999999999974 5 999999999999999888641 113589999
Q ss_pred CeEEeecCCcceeecCcCcCc-chHHHHHHHHHHH--------hcCCCccEEEecCceEEEE-c-ccCCCC-------Cc
Q 004314 659 GYFMRWSADEEWQNCGQSVDF-GWIQIAEPVMKLY--------TESTDGSYIEIKESALVWH-H-RDADPG-------FG 720 (761)
Q Consensus 659 Ga~ir~~~~~~w~~~~~~~~~-~w~~~v~~im~~y--------~~~t~Gs~iE~k~~~l~~h-y-r~ad~d-------~~ 720 (761)
|+.++..++..|... .+. -..+.+.++++.. ....++.|++.+...+.+. + +..+.+ +.
T Consensus 81 Ga~i~~~~~~i~~~~---~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (262)
T 2fue_A 81 GTVQYKHGRLLSKQT---IQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSELD 157 (262)
T ss_dssp GTEEEETTEECCCCC---HHHHHCHHHHHHHHHHHHHHHHTCCCSCCCSCSEEECSSCEEECSSCTTCCHHHHHHHHHHH
T ss_pred CcEEEeCCeEEEEee---ccccCCHHHHHHHHHHHHHcCceEEEEeCCeEEEechHHhhhHHhhcCCCcccccccEEEEc
Confidence 999987532222211 000 0133344443322 1234567776544332221 1 111100 00
Q ss_pred --hHHHHHHHHHHHHHhcCCCcEEEe-CCeEEEEEeCCCCcCC
Q 004314 721 --SSQAKELLDHLESVLANEPAAVKS-GQFIVEVKPQVYIQLR 760 (761)
Q Consensus 721 --~~qa~el~~~L~~~l~~~~v~V~~-G~~~vEV~p~gvnKG~ 760 (761)
.....++.+.+.+.+.+..+.+.. |..++||.|+|+|||.
T Consensus 158 ~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~leI~~~~vsKg~ 200 (262)
T 2fue_A 158 KKEKIREKFVEALKTEFAGKGLRFSRGGMISFDVFPEGWDKRY 200 (262)
T ss_dssp HHHCHHHHHHHHHHHHTTTSCEEEECCSSSCEEEEETTCSTTH
T ss_pred CCHHHHHHHHHHHHHhCCCceEEEEECCCcEEEEecCCCCHHH
Confidence 011233445555544432466654 7889999999999984
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.36 E-value=1.3e-12 Score=137.75 Aligned_cols=80 Identities=25% Similarity=0.329 Sum_probs=65.8
Q ss_pred HHHHhccceeEEecCCCcCCCCCCCCC-CCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC-CCceEEccCCeE
Q 004314 584 SAYLRSKSRAILFDYDGTVMPQTSINK-APSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC-KKLGIAAEHGYF 661 (761)
Q Consensus 584 ~~y~~s~~rlI~lDyDGTL~~~~~~~~-~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~-~~l~liaehGa~ 661 (761)
++|...+.|+|++|+||||++. .. .++++++++|++|.+ .+..|+++|||+...+.+++..+ .+.++|++||+.
T Consensus 14 ~~~~~~~~kli~~DlDGTLl~~---~~~~i~~~~~~al~~l~~-~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~ 89 (283)
T 3dao_A 14 NLYFQGMIKLIATDIDGTLVKD---GSLLIDPEYMSVIDRLID-KGIIFVVCSGRQFSSEFKLFAPIKHKLLYITDGGTV 89 (283)
T ss_dssp -----CCCCEEEECCBTTTBST---TCSCCCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHTGGGGGGCEEEETTTTE
T ss_pred hhhhccCceEEEEeCcCCCCCC---CCCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCCcEEEECCCcE
Confidence 5788999999999999999983 44 688999999999986 69999999999999999998765 346899999999
Q ss_pred EeecCC
Q 004314 662 MRWSAD 667 (761)
Q Consensus 662 ir~~~~ 667 (761)
+...++
T Consensus 90 i~~~~~ 95 (283)
T 3dao_A 90 VRTPKE 95 (283)
T ss_dssp EECSSC
T ss_pred EEECCE
Confidence 988543
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.35 E-value=3.2e-12 Score=134.90 Aligned_cols=78 Identities=14% Similarity=0.134 Sum_probs=61.9
Q ss_pred HHHHhccceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC-CCceEEccCCeEE
Q 004314 584 SAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC-KKLGIAAEHGYFM 662 (761)
Q Consensus 584 ~~y~~s~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~-~~l~liaehGa~i 662 (761)
.+|+..+.|+|++|+||||++ ....++++++++|++|.+ +++.|+++|||+...+.+++..+ .+..+|++||+.+
T Consensus 14 ~~~~~~~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~-~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~nGa~i 89 (285)
T 3pgv_A 14 NLYFQGMYQVVASDLDGTLLS---PDHFLTPYAKETLKLLTA-RGINFVFATGRHYIDVGQIRDNLGIRSYMITSNGARV 89 (285)
T ss_dssp -------CCEEEEECCCCCSC---TTSCCCHHHHHHHHHHHT-TTCEEEEECSSCGGGGHHHHHHHCSCCEEEEGGGTEE
T ss_pred cccccCcceEEEEeCcCCCCC---CCCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHhcCCCccEEEcCCeEE
Confidence 589999999999999999998 456788999999999985 69999999999999998888654 2356899999999
Q ss_pred eec
Q 004314 663 RWS 665 (761)
Q Consensus 663 r~~ 665 (761)
...
T Consensus 90 ~~~ 92 (285)
T 3pgv_A 90 HDS 92 (285)
T ss_dssp ECT
T ss_pred ECC
Confidence 864
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.31 E-value=3.3e-11 Score=133.97 Aligned_cols=247 Identities=15% Similarity=0.135 Sum_probs=154.7
Q ss_pred HHHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhh--hcCEEeeeCHHHHH
Q 004314 192 RVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALL--NADLIGFHTFDYAR 269 (761)
Q Consensus 192 ~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll--~~DligF~t~~~~~ 269 (761)
++++..+| |+|++|+.-...++..+..+..++|+++ .+.+.-+...++ |+.+++.+.++ .+|++-..+....+
T Consensus 108 ~~l~~~kP--D~Vi~~gd~~~~l~~~laA~~~~IPv~h-~~aglrs~~~~~--~~p~~~~r~~~~~~a~~~~~~se~~~~ 182 (403)
T 3ot5_A 108 EVIAAENP--DIVLVHGDTTTSFAAGLATFYQQKMLGH-VEAGLRTWNKYS--PFPEEMNRQLTGVMADIHFSPTKQAKE 182 (403)
T ss_dssp HHHHHHCC--SEEEEETTCHHHHHHHHHHHHTTCEEEE-ESCCCCCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHH
T ss_pred HHHHHcCC--CEEEEECCchhHHHHHHHHHHhCCCEEE-EECCcccccccc--CCcHHHHHHHHHHhcCEEECCCHHHHH
Confidence 34455687 8999999755555544444456788753 343332222221 34456666543 37998889998888
Q ss_pred HHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEecc-ccCcccchhhhccchHHHHHHHHHHHcC-CCeEEEeecCccc
Q 004314 270 HFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPV-GIHMGQIESVLRLADKDWRVQELKQQFE-GKTVLLGVDDMDI 347 (761)
Q Consensus 270 ~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~-GId~~~f~~~~~~~~~~~~~~~lr~~~~-~~~vil~VdRld~ 347 (761)
+|.+ .|... .+|.++++ ++|...+..... .. .+.++++. ++.+++.++|...
T Consensus 183 ~l~~-----~Gi~~---------------~~i~vvGn~~~D~~~~~~~~~--~~----~~~~~~l~~~~~vlv~~~r~~~ 236 (403)
T 3ot5_A 183 NLLA-----EGKDP---------------ATIFVTGNTAIDALKTTVQKD--YH----HPILENLGDNRLILMTAHRREN 236 (403)
T ss_dssp HHHH-----TTCCG---------------GGEEECCCHHHHHHHHHSCTT--CC----CHHHHSCTTCEEEEECCCCHHH
T ss_pred HHHH-----cCCCc---------------ccEEEeCCchHHHHHhhhhhh--cc----hHHHHhccCCCEEEEEeCcccc
Confidence 8864 34321 12334443 666544321100 00 12223333 3456677888754
Q ss_pred -cCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHH
Q 004314 348 -FKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSER 426 (761)
Q Consensus 348 -~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el 426 (761)
-|++...++|+.++.+++|+++ +|.++.| ++ .+++.+++.. + ....|.++ ++++..++
T Consensus 237 ~~~~l~~ll~a~~~l~~~~~~~~----~v~~~~~----~~---~~~~~l~~~~---~------~~~~v~l~-~~l~~~~~ 295 (403)
T 3ot5_A 237 LGEPMQGMFEAVREIVESREDTE----LVYPMHL----NP---AVREKAMAIL---G------GHERIHLI-EPLDAIDF 295 (403)
T ss_dssp HTTHHHHHHHHHHHHHHHCTTEE----EEEECCS----CH---HHHHHHHHHH---T------TCTTEEEE-CCCCHHHH
T ss_pred cCcHHHHHHHHHHHHHHhCCCce----EEEecCC----CH---HHHHHHHHHh---C------CCCCEEEe-CCCCHHHH
Confidence 3789999999999999999865 5554433 12 2333444321 1 11356655 58888999
Q ss_pred HHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEc-CCCCCccccc--CcEEECCCCHHHHH
Q 004314 427 AAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVS-EFIGCSPSLS--GAIRVNPWNIEATA 503 (761)
Q Consensus 427 ~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~S-e~~G~~~~l~--~al~VnP~d~~~~A 503 (761)
..+|+.||++|.+| | -+..||++||. |+|++ ..++..+.+. .+++|.+ |.++++
T Consensus 296 ~~l~~~ad~vv~~S---G--g~~~EA~a~g~-----------------PvV~~~~~~~~~e~v~~g~~~lv~~-d~~~l~ 352 (403)
T 3ot5_A 296 HNFLRKSYLVFTDS---G--GVQEEAPGMGV-----------------PVLVLRDTTERPEGIEAGTLKLIGT-NKENLI 352 (403)
T ss_dssp HHHHHHEEEEEECC---H--HHHHHGGGTTC-----------------CEEECCSSCSCHHHHHHTSEEECCS-CHHHHH
T ss_pred HHHHHhcCEEEECC---c--cHHHHHHHhCC-----------------CEEEecCCCcchhheeCCcEEEcCC-CHHHHH
Confidence 99999999998888 2 34499999976 78887 5555555553 3677776 999999
Q ss_pred HHHHHHHcCC
Q 004314 504 EAMHEAIQMN 513 (761)
Q Consensus 504 ~ai~~aL~m~ 513 (761)
++|.++|+.+
T Consensus 353 ~ai~~ll~~~ 362 (403)
T 3ot5_A 353 KEALDLLDNK 362 (403)
T ss_dssp HHHHHHHHCH
T ss_pred HHHHHHHcCH
Confidence 9999999864
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=99.26 E-value=7.8e-11 Score=123.33 Aligned_cols=159 Identities=17% Similarity=0.184 Sum_probs=101.3
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHH-HHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC-CceEEccCCeEEeecCCc
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQA-VISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSADE 668 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~-~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~-~l~liaehGa~ir~~~~~ 668 (761)
.|+|++|+||||++. ....+++ ++++|++|.+ .+..|+|+|||++..+.+++..+. ..++|++||+.+...++.
T Consensus 3 ~kli~~DlDGTLl~~---~~~i~~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~ 78 (271)
T 1rlm_A 3 VKVIVTDMDGTFLND---AKTYNQPRFMAQYQELKK-RGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQ 78 (271)
T ss_dssp CCEEEECCCCCCSCT---TSCCCHHHHHHHHHHHHH-HTCEEEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEEETTEE
T ss_pred ccEEEEeCCCCCCCC---CCcCCHHHHHHHHHHHHH-CCCEEEEEeCCcHHHHHHHHHhcCCCCEEEECCccEEEECCeE
Confidence 589999999999983 4567788 4999999986 589999999999999999987653 467999999999864322
Q ss_pred ceeecCcCcCcchHHHHHHHHHHHhcC---------CCccEEEecCc------------eEEE--EcccCCCC-------
Q 004314 669 EWQNCGQSVDFGWIQIAEPVMKLYTES---------TDGSYIEIKES------------ALVW--HHRDADPG------- 718 (761)
Q Consensus 669 ~w~~~~~~~~~~w~~~v~~im~~y~~~---------t~Gs~iE~k~~------------~l~~--hyr~ad~d------- 718 (761)
.+.. ..+ .+.+.++++.+.+. .++.|++.... .+.. .+......
T Consensus 79 i~~~---~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~i~ 152 (271)
T 1rlm_A 79 LFHG---ELT---RHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLN 152 (271)
T ss_dssp EEEC---CCC---HHHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGCCSCEEEEEEE
T ss_pred EEEe---cCC---HHHHHHHHHHHHhCCCccEEEEeCCCEEeeCCCCHHHHHHHHHhCCCCEEeCchhhCCCceEEEEEE
Confidence 2221 112 24455555554332 12334321100 0000 00000000
Q ss_pred CchHHHHHHHHHHHHHhcCCCcEE-EeCCeEEEEEeCCCCcCC
Q 004314 719 FGSSQAKELLDHLESVLANEPAAV-KSGQFIVEVKPQVYIQLR 760 (761)
Q Consensus 719 ~~~~qa~el~~~L~~~l~~~~v~V-~~G~~~vEV~p~gvnKG~ 760 (761)
.....+.++.+++.+.+.. .+.+ .+|..++||.|++++||.
T Consensus 153 ~~~~~~~~~~~~l~~~~~~-~~~~~~s~~~~~ei~~~~~~K~~ 194 (271)
T 1rlm_A 153 LPDEQIPLVIDKLHVALDG-IMKPVTSGFGFIDLIIPGLHKAN 194 (271)
T ss_dssp CCGGGHHHHHHHHHHHTTT-SSEEEECSTTEEEEECTTCSHHH
T ss_pred cCHHHHHHHHHHHHHHcCC-cEEEEeccCCeEEEEcCCCChHH
Confidence 0123456677777655543 3554 468899999999999984
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.25 E-value=5.6e-11 Score=124.34 Aligned_cols=72 Identities=18% Similarity=0.069 Sum_probs=62.7
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC----CceEEccCCeEEeec
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK----KLGIAAEHGYFMRWS 665 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~----~l~liaehGa~ir~~ 665 (761)
+.|+|++|+||||++ ....++++++++|++|.+ .+..|+++|||+...+.+++..+. ...+|++||+.+...
T Consensus 4 ~~kli~fDlDGTLl~---~~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~ 79 (279)
T 4dw8_A 4 KYKLIVLDLDGTLTN---SKKEISSRNRETLIRIQE-QGIRLVLASGRPTYGIVPLANELRMNEFGGFILSYNGGEIINW 79 (279)
T ss_dssp CCCEEEECCCCCCSC---TTSCCCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHTTGGGTTCEEEEGGGTEEEET
T ss_pred cceEEEEeCCCCCCC---CCCccCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHHhCCCCCCCEEEEeCCeEEEEC
Confidence 478999999999998 456788999999999996 599999999999999999887653 367899999999864
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.23 E-value=5e-11 Score=126.96 Aligned_cols=161 Identities=14% Similarity=0.152 Sum_probs=100.6
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHH-HHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC-CceEEccCCeEEeecCC
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQA-VISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSAD 667 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~-~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~-~l~liaehGa~ir~~~~ 667 (761)
..|+|++|+||||++. ....+++ +.++|++|.+ .+..|+++|||+...+.+++..++ ..++|++||+.+...++
T Consensus 36 ~iKli~fDlDGTLld~---~~~i~~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~ 111 (304)
T 3l7y_A 36 SVKVIATDMDGTFLNS---KGSYDHNRFQRILKQLQE-RDIRFVVASSNPYRQLREHFPDCHEQLTFVGENGANIISKNQ 111 (304)
T ss_dssp CCSEEEECCCCCCSCT---TSCCCHHHHHHHHHHHHH-TTCEEEEECSSCHHHHHTTCTTTGGGSEEEEGGGTEEEETTE
T ss_pred eeEEEEEeCCCCCCCC---CCccCHHHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHhCCCCcEEeCCCcEEEECCE
Confidence 5799999999999983 4567787 8999999996 599999999999999999998763 36899999999976533
Q ss_pred cceeecCcCcCcchHHHHHHHHHHHhc----------CCCccEEEecCc--------------eEEEEcccC-CCC----
Q 004314 668 EEWQNCGQSVDFGWIQIAEPVMKLYTE----------STDGSYIEIKES--------------ALVWHHRDA-DPG---- 718 (761)
Q Consensus 668 ~~w~~~~~~~~~~w~~~v~~im~~y~~----------~t~Gs~iE~k~~--------------~l~~hyr~a-d~d---- 718 (761)
..+.. ..+ .+.+.++++.+.+ ..++.|+..... ...-.+.+. ...
T Consensus 112 ~i~~~---~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ki 185 (304)
T 3l7y_A 112 SLIEV---FQQ---REDIASIIYFIEEKYPQAVIALSGEKKGYLKKGVSENIVKMLSPFFPVLELVNSFSPLPDERFFKL 185 (304)
T ss_dssp EEEEC---CCC---HHHHHHHHHHHHHHCTTSEEEEEESSCEEEETTSCHHHHHHHTTSCSSEEEESCCSSCC-CCEEEE
T ss_pred EEEEe---cCC---HHHHHHHHHHHHHhcCCeEEEEEcCCCEeeeCCCCHHHHHHHHHHhccceecCCHHHcCcCCeEEE
Confidence 22222 112 2233444433322 122333321100 000000000 000
Q ss_pred ---CchHHHHHHHHHHHHHhcCCCcEE-EeCCeEEEEEeCCCCcCC
Q 004314 719 ---FGSSQAKELLDHLESVLANEPAAV-KSGQFIVEVKPQVYIQLR 760 (761)
Q Consensus 719 ---~~~~qa~el~~~L~~~l~~~~v~V-~~G~~~vEV~p~gvnKG~ 760 (761)
.......++.+.|.+.+.+..+.+ .++..++||.|+++|||.
T Consensus 186 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~ 231 (304)
T 3l7y_A 186 TLQVKEEESAQIMKAIADYKTSQRLVGTASGFGYIDIITKGLHKGW 231 (304)
T ss_dssp EEECCGGGHHHHHHHHHTSTTTTTEEEEECSTTEEEEEETTCSHHH
T ss_pred EEEcCHHHHHHHHHHHHHhcCCCeEEEEEcCCceEEEEcCCCCHHH
Confidence 012345566777765554323554 568999999999999984
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.22 E-value=4.5e-11 Score=125.72 Aligned_cols=71 Identities=18% Similarity=0.197 Sum_probs=59.1
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC--CceEEccCCeEEee
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK--KLGIAAEHGYFMRW 664 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~--~l~liaehGa~ir~ 664 (761)
+.|+|++|+||||++. +...+++++++|++|.+ .+..|+|+|||++..+..++..++ ...+|++||+.++.
T Consensus 8 ~~~li~~DlDGTLl~~---~~~~~~~~~~~l~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~ 80 (275)
T 1xvi_A 8 QPLLVFSDLDGTLLDS---HSYDWQPAAPWLTRLRE-ANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQL 80 (275)
T ss_dssp CCEEEEEECTTTTSCS---SCCSCCTTHHHHHHHHH-TTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEEC
T ss_pred CceEEEEeCCCCCCCC---CCcCCHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCCeEEEeCCCeEEe
Confidence 4699999999999984 23455678999999986 699999999999999999987652 22699999999973
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.20 E-value=4.6e-11 Score=125.98 Aligned_cols=71 Identities=18% Similarity=0.196 Sum_probs=60.9
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC-C---ceEEccCCeEEeec
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-K---LGIAAEHGYFMRWS 665 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~-~---l~liaehGa~ir~~ 665 (761)
.|+|++|+||||++ .+..++++++++|++|.+ .++.|+++|||++..+..++..++ + ..+|++||+.+...
T Consensus 5 ~kli~~DlDGTLl~---~~~~i~~~~~~aL~~l~~-~Gi~vviaTGR~~~~~~~~~~~l~l~~~~~~~I~~NGa~i~~~ 79 (282)
T 1rkq_A 5 IKLIAIDMDGTLLL---PDHTISPAVKNAIAAARA-RGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKA 79 (282)
T ss_dssp CCEEEECCCCCCSC---TTSCCCHHHHHHHHHHHH-TTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEET
T ss_pred ceEEEEeCCCCCCC---CCCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHhCCCCCCCeEEEeCCeEEEEC
Confidence 58999999999998 356788999999999986 699999999999999998886542 1 26899999999874
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.18 E-value=8.4e-11 Score=125.42 Aligned_cols=73 Identities=18% Similarity=0.212 Sum_probs=61.1
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhc--cCCC--C---ceEEccCCeEE
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWF--SPCK--K---LGIAAEHGYFM 662 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f--~~~~--~---l~liaehGa~i 662 (761)
..|+|++|+||||++.. +..++++++++|++|.+ .++.|+++|||++..+..++ ..++ + .++|++||+.+
T Consensus 26 ~ikli~~DlDGTLl~~~--~~~is~~~~~al~~l~~-~Gi~v~iaTGR~~~~~~~~~~~~~l~~~~~~~~~~I~~NGa~i 102 (301)
T 2b30_A 26 DIKLLLIDFDGTLFVDK--DIKVPSENIDAIKEAIE-KGYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVYINGTIV 102 (301)
T ss_dssp CCCEEEEETBTTTBCCT--TTCSCHHHHHHHHHHHH-HTCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEEEGGGTEE
T ss_pred cccEEEEECCCCCcCCC--CCccCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHhhHHhhcccccCCCeEEEcCCeEE
Confidence 46899999999999831 45688999999999996 59999999999999998888 5432 1 45999999999
Q ss_pred eec
Q 004314 663 RWS 665 (761)
Q Consensus 663 r~~ 665 (761)
..+
T Consensus 103 ~~~ 105 (301)
T 2b30_A 103 YDQ 105 (301)
T ss_dssp ECT
T ss_pred EeC
Confidence 874
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.17 E-value=1.7e-10 Score=120.57 Aligned_cols=70 Identities=21% Similarity=0.143 Sum_probs=59.3
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC-Cc-eEEccCCeEEeec
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KL-GIAAEHGYFMRWS 665 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~-~l-~liaehGa~ir~~ 665 (761)
.|+|++|+||||++. ...++++++++|++ . +.++.|+++|||+...+.+++..++ +. .+|++||+.+...
T Consensus 2 ikli~~DlDGTLl~~---~~~i~~~~~~al~~-~-~~Gi~v~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~ 73 (268)
T 1nf2_A 2 YRVFVFDLDGTLLND---NLEISEKDRRNIEK-L-SRKCYVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLP 73 (268)
T ss_dssp BCEEEEECCCCCSCT---TSCCCHHHHHHHHH-H-TTTSEEEEECSSCHHHHHHHHHHHSSSCCCEEEGGGTEEEET
T ss_pred ccEEEEeCCCcCCCC---CCccCHHHHHHHHH-H-hCCCEEEEECCCChHHHHHHHHHhCCCCCeEEEeCCeEEECC
Confidence 479999999999983 56688999999999 6 5799999999999999988886542 22 6899999999874
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=2e-11 Score=126.11 Aligned_cols=155 Identities=14% Similarity=0.125 Sum_probs=92.2
Q ss_pred eeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC--CC-CceEEccCCeEEeecC--
Q 004314 592 RAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP--CK-KLGIAAEHGYFMRWSA-- 666 (761)
Q Consensus 592 rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~--~~-~l~liaehGa~ir~~~-- 666 (761)
++|++|+||||++.. .. .++++++|+++. .++.|+++|||++..+.+++.. ++ ..++|++||+.++...
T Consensus 4 ~li~~DlDGTLl~~~---~~-~~~~~~~l~~~~--~gi~v~iaTGR~~~~~~~~~~~l~l~~~~~~I~~NGa~i~~~~~~ 77 (244)
T 1s2o_A 4 LLLISDLDNTWVGDQ---QA-LEHLQEYLGDRR--GNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGL 77 (244)
T ss_dssp EEEEECTBTTTBSCH---HH-HHHHHHHHHTTG--GGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEE
T ss_pred eEEEEeCCCCCcCCH---HH-HHHHHHHHHHhc--CCCEEEEEcCCCHHHHHHHHHHcCCCCCCEEEECCCcEEEeCCCc
Confidence 499999999999842 22 267888888855 3789999999999999998865 32 2469999999998742
Q ss_pred CcceeecCcCcCcch-HHHHHHHHHHHhcCCCccEEEecCceEEEEcccCCCCCchHHHHHHHHHHHHHhcCCCcEE-Ee
Q 004314 667 DEEWQNCGQSVDFGW-IQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAV-KS 744 (761)
Q Consensus 667 ~~~w~~~~~~~~~~w-~~~v~~im~~y~~~t~Gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~~v~V-~~ 744 (761)
+..|... ....| ...+..++..+.........+.+...+.+++... .......++.+.+... ...+.+ .+
T Consensus 78 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~---~~~~~~~~l~~~~~~~--~~~~~~~~s 149 (244)
T 1s2o_A 78 DQHWADY---LSEHWQRDILQAIADGFEALKPQSPLEQNPWKISYHLDPQ---ACPTVIDQLTEMLKET--GIPVQVIFS 149 (244)
T ss_dssp CHHHHHH---HHTTCCHHHHHHHHHTCTTEEECCGGGCBTTBEEEEECTT---SCTHHHHHHHHHHHTS--SCCEEEEEE
T ss_pred ChHHHHH---HhccccHHHHHHHHHhccCccccCcccCCCeEEEEEeChh---hHHHHHHHHHHHHHhc--CCCeEEEEe
Confidence 1122211 11223 2223333332221100111123445666665432 1112233344444321 224666 46
Q ss_pred CCeEEEEEeCCCCcCC
Q 004314 745 GQFIVEVKPQVYIQLR 760 (761)
Q Consensus 745 G~~~vEV~p~gvnKG~ 760 (761)
+..++||.|+|++||.
T Consensus 150 ~~~~lei~~~~~~K~~ 165 (244)
T 1s2o_A 150 SGKDVDLLPQRSNKGN 165 (244)
T ss_dssp TTTEEEEEETTCSHHH
T ss_pred cCceEEeccCCCChHH
Confidence 8899999999999984
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.16 E-value=4.2e-10 Score=118.38 Aligned_cols=95 Identities=14% Similarity=0.162 Sum_probs=70.8
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC-CceEEccCCeEEeecCCc
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSADE 668 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~-~l~liaehGa~ir~~~~~ 668 (761)
+.|+|++|+||||++ .....+++++++|++|.+ .+..|+++|||+...+..++..++ +.++|++||+.++...+.
T Consensus 5 ~~kli~fDlDGTLl~---~~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~ 80 (290)
T 3dnp_A 5 SKQLLALNIDGALLR---SNGKIHQATKDAIEYVKK-KGIYVTLVTNRHFRSAQKIAKSLKLDAKLITHSGAYIAEKIDA 80 (290)
T ss_dssp -CCEEEECCCCCCSC---TTSCCCHHHHHHHHHHHH-TTCEEEEBCSSCHHHHHHHHHHTTCCSCEEEGGGTEEESSTTS
T ss_pred cceEEEEcCCCCCCC---CCCccCHHHHHHHHHHHH-CCCEEEEECCCChHHHHHHHHHcCCCCeEEEcCCeEEEcCCCC
Confidence 468999999999998 456788999999999986 599999999999999988876542 247999999999863222
Q ss_pred c-eeecCcCcCcchHHHHHHHHHHHhc
Q 004314 669 E-WQNCGQSVDFGWIQIAEPVMKLYTE 694 (761)
Q Consensus 669 ~-w~~~~~~~~~~w~~~v~~im~~y~~ 694 (761)
. +.. ..+ .+.+.++++.+.+
T Consensus 81 ~~~~~---~l~---~~~~~~i~~~~~~ 101 (290)
T 3dnp_A 81 PFFEK---RIS---DDHTFNIVQVLES 101 (290)
T ss_dssp CSEEC---CCC---HHHHHHHHHHHHT
T ss_pred EEEec---CCC---HHHHHHHHHHHHH
Confidence 2 221 111 4556666666544
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.13 E-value=1.8e-10 Score=120.41 Aligned_cols=70 Identities=17% Similarity=0.197 Sum_probs=50.1
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC----CceEEccCCeEEee
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK----KLGIAAEHGYFMRW 664 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~----~l~liaehGa~ir~ 664 (761)
+.|+|++|+||||++ ....++++++++|++|.+ .+..|+++|||+...+.+++..+. ...+|++||+ +..
T Consensus 4 ~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa-i~~ 77 (279)
T 3mpo_A 4 TIKLIAIDIDGTLLN---EKNELAQATIDAVQAAKA-QGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAITFNGS-VAQ 77 (279)
T ss_dssp -CCEEEECC--------------CHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEEGGGT-EEE
T ss_pred ceEEEEEcCcCCCCC---CCCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEEcCcE-EEE
Confidence 468999999999998 456688999999999986 699999999999999999887542 2469999999 543
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.10 E-value=2.1e-10 Score=119.25 Aligned_cols=72 Identities=15% Similarity=0.227 Sum_probs=61.8
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCCCceEEccCCeEEeecC
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSA 666 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~~l~liaehGa~ir~~~ 666 (761)
.|+|++|+||||++. ....+++++++|++|.+ .+..|+++|||+...+.+++..++--.++++||+.+...+
T Consensus 5 ~kli~fDlDGTLl~~---~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~~~~~~~i~~nGa~i~~~~ 76 (274)
T 3fzq_A 5 YKLLILDIDGTLRDE---VYGIPESAKHAIRLCQK-NHCSVVICTGRSMGTIQDDVLSLGVDGYIAGGGNYIQYHG 76 (274)
T ss_dssp CCEEEECSBTTTBBT---TTBCCHHHHHHHHHHHH-TTCEEEEECSSCTTTSCHHHHTTCCSEEEETTTTEEEETT
T ss_pred ceEEEEECCCCCCCC---CCcCCHHHHHHHHHHHH-CCCEEEEEeCCChHHHHHHHHHcCCCEEEecCccEEEECC
Confidence 589999999999984 45688999999999985 6999999999999999998876643358999999998654
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.09 E-value=1.4e-09 Score=114.66 Aligned_cols=71 Identities=20% Similarity=0.205 Sum_probs=60.7
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC-CceEEccCCeEEeec
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWS 665 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~-~l~liaehGa~ir~~ 665 (761)
.|+|++|+||||++. ....+++++++|++|.+ .|..|+++|||+...+.+++..+. +..+|++||+.++..
T Consensus 4 ikli~~DlDGTLl~~---~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~ 75 (288)
T 1nrw_A 4 MKLIAIDLDGTLLNS---KHQVSLENENALRQAQR-DGIEVVVSTGRAHFDVMSIFEPLGIKTWVISANGAVIHDP 75 (288)
T ss_dssp CCEEEEECCCCCSCT---TSCCCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHGGGTCCCEEEEGGGTEEECT
T ss_pred eEEEEEeCCCCCCCC---CCccCHHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCeEEEcC
Confidence 589999999999983 45678999999999986 699999999999999998887542 245899999999874
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.07 E-value=2.2e-10 Score=117.09 Aligned_cols=71 Identities=20% Similarity=0.084 Sum_probs=60.5
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC-CceEEccCCeEEeec
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWS 665 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~-~l~liaehGa~ir~~ 665 (761)
.|+|++|+||||++. +..++++++++|++|.+ .+..|+++|||+...+.+++..++ +..+|++||+.+...
T Consensus 5 ~kli~~DlDGTLl~~---~~~i~~~~~~~l~~l~~-~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~ 76 (227)
T 1l6r_A 5 IRLAAIDVDGNLTDR---DRLISTKAIESIRSAEK-KGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDN 76 (227)
T ss_dssp CCEEEEEHHHHSBCT---TSCBCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECT
T ss_pred eEEEEEECCCCCcCC---CCcCCHHHHHHHHHHHH-CCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeC
Confidence 589999999999984 55688999999999985 699999999999999998886542 235899999999864
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.03 E-value=3.6e-10 Score=115.45 Aligned_cols=149 Identities=14% Similarity=0.100 Sum_probs=93.5
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC-CceEEccCCeEEeecCCcc
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSADEE 669 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~-~l~liaehGa~ir~~~~~~ 669 (761)
.|+|++|+||||++. ...++++++++|++|.+ .++.|+++|||+...+.+++..+. +..++++||+.+...++..
T Consensus 3 ~kli~~DlDGTLl~~---~~~i~~~~~~al~~l~~-~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~ 78 (231)
T 1wr8_A 3 IKAISIDIDGTITYP---NRMIHEKALEAIRRAES-LGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRI 78 (231)
T ss_dssp CCEEEEESTTTTBCT---TSCBCHHHHHHHHHHHH-TTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEE
T ss_pred eeEEEEECCCCCCCC---CCcCCHHHHHHHHHHHH-CCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEE
Confidence 479999999999983 55688999999999985 699999999999999888876432 2458899999987642222
Q ss_pred eeecCcCcCcchHHHHHHHHHHHhcCCCccEEEe-cCc---eEEEEcccCCCCCchHHHHHHHHHHHHHhcCCCcEEEeC
Q 004314 670 WQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEI-KES---ALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSG 745 (761)
Q Consensus 670 w~~~~~~~~~~w~~~v~~im~~y~~~t~Gs~iE~-k~~---~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~~v~V~~G 745 (761)
|.. .. +.+.++++.+.+..||..++. ... .+.+. .+......+.++.+ .+. ..+.+++|
T Consensus 79 ~~~---~l-----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~----~~~-~~~~~~~~ 141 (231)
T 1wr8_A 79 FLA---SM-----DEEWILWNEIRKRFPNARTSYTMPDRRAGLVIM----RETINVETVREIIN----ELN-LNLVAVDS 141 (231)
T ss_dssp ESC---CC-----SHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEEC----TTTSCHHHHHHHHH----HTT-CSCEEEEC
T ss_pred Eec---cH-----HHHHHHHHHHHHhCCCceEEecCCCceeeEEEE----CCCCCHHHHHHHHH----hcC-CcEEEEec
Confidence 221 11 334444444331233433310 000 11221 11112222333332 233 34666689
Q ss_pred CeEEEEEeCCCCcCC
Q 004314 746 QFIVEVKPQVYIQLR 760 (761)
Q Consensus 746 ~~~vEV~p~gvnKG~ 760 (761)
..++|+.|++++|+.
T Consensus 142 ~~~~ei~~~~~~K~~ 156 (231)
T 1wr8_A 142 GFAIHVKKPWINKGS 156 (231)
T ss_dssp SSCEEEECTTCCHHH
T ss_pred CcEEEEecCCCChHH
Confidence 999999999999974
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.01 E-value=1.4e-09 Score=112.86 Aligned_cols=73 Identities=19% Similarity=0.254 Sum_probs=60.3
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCCCceEEccCCeEE-eecC
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFM-RWSA 666 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~~l~liaehGa~i-r~~~ 666 (761)
..|+|++|+||||++. .....+++++++|++|.+ .+..|+++|||+...+ +.+..++-.++|++||+.+ ...+
T Consensus 11 miKli~~DlDGTLl~~--~~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~-~~~~~l~~~~~i~~nGa~i~~~~~ 84 (268)
T 3r4c_A 11 MIKVLLLDVDGTLLSF--ETHKVSQSSIDALKKVHD-SGIKIVIATGRAASDL-HEIDAVPYDGVIALNGAECVLRDG 84 (268)
T ss_dssp CCCEEEECSBTTTBCT--TTCSCCHHHHHHHHHHHH-TTCEEEEECSSCTTCC-GGGTTSCCCEEEEGGGTEEEETTS
T ss_pred ceEEEEEeCCCCCcCC--CCCcCCHHHHHHHHHHHH-CCCEEEEEcCCChHHh-HHHHhcCCCcEEEeCCcEEEEcCC
Confidence 3689999999999973 245678999999999996 5999999999999988 4555554456899999999 7654
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.95 E-value=1.7e-09 Score=111.75 Aligned_cols=70 Identities=19% Similarity=0.211 Sum_probs=57.3
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC-CceEEccCCeEEeecC
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSA 666 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~-~l~liaehGa~ir~~~ 666 (761)
.|+|++|+||||+ . ...++ +++++|++|.+ .++.|+|+|||+...+.+++..++ +.++|++||+.+..++
T Consensus 2 ikli~~DlDGTLl-~---~~~~~-~~~~~l~~l~~-~g~~~~i~Tgr~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~ 72 (249)
T 2zos_A 2 IRLIFLDIDKTLI-P---GYEPD-PAKPIIEELKD-MGFEIIFNSSKTRAEQEYYRKELEVETPFISENGSAIFIPK 72 (249)
T ss_dssp EEEEEECCSTTTC-T---TSCSG-GGHHHHHHHHH-TTEEEEEBCSSCHHHHHHHHHHHTCCSCEEETTTTEEECCT
T ss_pred ccEEEEeCCCCcc-C---CCCcH-HHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCccEEEeCCeEEEccC
Confidence 4899999999999 3 23343 49999999986 699999999999999998887542 2479999999998763
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=98.93 E-value=1.1e-09 Score=113.79 Aligned_cols=69 Identities=19% Similarity=0.303 Sum_probs=57.2
Q ss_pred eeEEecCCCcCCCCCCCCCC-CCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCC----CceEEccCCeEEeec
Q 004314 592 RAILFDYDGTVMPQTSINKA-PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK----KLGIAAEHGYFMRWS 665 (761)
Q Consensus 592 rlI~lDyDGTL~~~~~~~~~-p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~----~l~liaehGa~ir~~ 665 (761)
|+|++|+||||++. ... .+++++++|++|.+ .|..|+++|||+ ..+.+++..++ --++|++||+.+...
T Consensus 3 kli~~DlDGTLl~~---~~~~i~~~~~~al~~l~~-~G~~~~iaTGR~-~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~ 76 (261)
T 2rbk_A 3 KALFFDIDGTLVSF---ETHRIPSSTIEALEAAHA-KGLKIFIATGRP-KAIINNLSELQDRNLIDGYITMNGAYCFVG 76 (261)
T ss_dssp CEEEECSBTTTBCT---TTSSCCHHHHHHHHHHHH-TTCEEEEECSSC-GGGCCSCHHHHHTTCCCEEEEGGGTEEEET
T ss_pred cEEEEeCCCCCcCC---CCCcCCHHHHHHHHHHHH-CCCEEEEECCCh-HHHHHHHHHhCcccccCeEEEeCCEEEEEC
Confidence 79999999999984 344 88999999999986 699999999999 88877765432 125899999999874
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.92 E-value=4.2e-09 Score=108.90 Aligned_cols=72 Identities=17% Similarity=0.258 Sum_probs=59.2
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCCCceEEccCCeEEeecC
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSA 666 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~~l~liaehGa~ir~~~ 666 (761)
.|+|++|+||||++. ....+++++++|++|.+ .|..|+++|||+...+..++..++--.+++.||+.+...+
T Consensus 3 ~kli~~DlDGTLl~~---~~~i~~~~~~al~~l~~-~G~~~~~aTGR~~~~~~~~~~~l~~~~~i~~nGa~i~~~~ 74 (258)
T 2pq0_A 3 RKIVFFDIDGTLLDE---QKQLPLSTIEAVRRLKQ-SGVYVAIATGRAPFMFEHVRKQLGIDSFVSFNGQYVVFEG 74 (258)
T ss_dssp CCEEEECTBTTTBCT---TSCCCHHHHHHHHHHHH-TTCEEEEECSSCGGGSHHHHHHHTCCCEEEGGGTEEEETT
T ss_pred ceEEEEeCCCCCcCC---CCccCHHHHHHHHHHHH-CCCEEEEECCCChHHHHHHHHhcCCCEEEECCCCEEEECC
Confidence 589999999999984 45678999999999986 6999999999999988887764321137899999998653
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.79 E-value=1.2e-09 Score=113.45 Aligned_cols=67 Identities=16% Similarity=0.178 Sum_probs=56.7
Q ss_pred eEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCCCceEEccCCeEEeecCC
Q 004314 593 AILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSAD 667 (761)
Q Consensus 593 lI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~~l~liaehGa~ir~~~~ 667 (761)
+|++|+||||++. . ..+++++++|++|.+ +++.|+++|||+...+. .++ + ...+|++||+.+..+..
T Consensus 2 li~~DlDGTLl~~---~-~i~~~~~~al~~l~~-~Gi~v~iaTGR~~~~~~-~l~-~-~~~~i~~nGa~i~~~~~ 68 (259)
T 3zx4_A 2 IVFTDLDGTLLDE---R-GELGPAREALERLRA-LGVPVVPVTAKTRKEVE-ALG-L-EPPFIVENGGGLYLPRD 68 (259)
T ss_dssp EEEECCCCCCSCS---S-SSCSTTHHHHHHHHH-TTCCEEEBCSSCHHHHH-HTT-C-CSSEEEGGGTEEEEETT
T ss_pred EEEEeCCCCCcCC---C-cCCHHHHHHHHHHHH-CCCeEEEEeCCCHHHHH-HcC-C-CCcEEEECCcEEEeCCC
Confidence 7999999999984 4 677899999999985 69999999999999998 554 2 24589999999988754
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=2.4e-07 Score=100.35 Aligned_cols=249 Identities=10% Similarity=0.015 Sum_probs=149.2
Q ss_pred HHHHhCCCCCEEEEeCCccc--hHH-HHHHHh-cCCCeEEEEEecCCCchhHHhcCcchHHH-HHHhhhcCEEeeeCHHH
Q 004314 193 VIEVINPEDDYVWIHDYHLM--VLP-TFLRRR-FTRLRMGFFLHSPFPSSEIYRTLPVREEI-LKALLNADLIGFHTFDY 267 (761)
Q Consensus 193 i~~~~~~~~DiVwvhDyhl~--llp-~~lr~~-~~~~~ig~flH~PfP~~e~fr~lp~r~~i-l~~ll~~DligF~t~~~ 267 (761)
+...+++ .|+|.+|-..+. ..+ .++++. ..++|+.++.|--||-.- ..-+..... ...+-.||.|..++...
T Consensus 68 ~~~~~~~-~DvIi~q~P~~~~~~~~~~~~~~lk~~~~k~i~~ihDl~pl~~--~~~~~~~~~E~~~y~~aD~Ii~~S~~~ 144 (339)
T 3rhz_A 68 IVAGLRH-GDVVIFQTPTWNTTEFDEKLMNKLKLYDIKIVLFIHDVVPLMF--SGNFYLMDRTIAYYNKADVVVAPSQKM 144 (339)
T ss_dssp HTTTCCT-TCEEEEEECCSSCHHHHHHHHHHHTTSSCEEEEEESCCHHHHC--GGGGGGHHHHHHHHTTCSEEEESCHHH
T ss_pred HHhcCCC-CCEEEEeCCCcchhhHHHHHHHHHHhcCCEEEEEecccHHhhC--ccchhhHHHHHHHHHHCCEEEECCHHH
Confidence 4444554 599999876543 222 334442 238999999998776321 000111111 12245799999999977
Q ss_pred HHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEecccc-CcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCcc
Q 004314 268 ARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGI-HMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMD 346 (761)
Q Consensus 268 ~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GI-d~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld 346 (761)
.+.+.+ .|+.. .+| ++.++ |.. .+. +. ....++++|+++||+.
T Consensus 145 ~~~l~~-----~G~~~---------------~ki--~~~~~~~~~--~~~---~~---------~~~~~~~~i~yaG~l~ 188 (339)
T 3rhz_A 145 IDKLRD-----FGMNV---------------SKT--VVQGMWDHP--TQA---PM---------FPAGLKREIHFPGNPE 188 (339)
T ss_dssp HHHHHH-----TTCCC---------------SEE--EECCSCCCC--CCC---CC---------CCCEEEEEEEECSCTT
T ss_pred HHHHHH-----cCCCc---------------Cce--eecCCCCcc--Ccc---cc---------cccCCCcEEEEeCCcc
Confidence 766543 13210 122 23332 211 000 00 0113467899999998
Q ss_pred ccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHH
Q 004314 347 IFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSER 426 (761)
Q Consensus 347 ~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el 426 (761)
...++. .+ .|+++ |++||. |++. +. . .|.|+ |.++.+|+
T Consensus 189 k~~~L~-------~l---~~~~~----f~ivG~-----G~~~----------------~l---~--nV~f~-G~~~~~el 227 (339)
T 3rhz_A 189 RFSFVK-------EW---KYDIP----LKVYTW-----QNVE----------------LP---Q--NVHKI-NYRPDEQL 227 (339)
T ss_dssp TCGGGG-------GC---CCSSC----EEEEES-----CCCC----------------CC---T--TEEEE-ECCCHHHH
T ss_pred hhhHHH-------hC---CCCCe----EEEEeC-----Cccc----------------Cc---C--CEEEe-CCCCHHHH
Confidence 532221 11 46655 888884 3321 01 1 47766 68999999
Q ss_pred HHHHHhcccceeccc-------ccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEEECC
Q 004314 427 AAYYTIAECVVVTAV-------RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNP 496 (761)
Q Consensus 427 ~aly~~ADv~vvtS~-------~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP 496 (761)
+++|+.||+.++... +..++....||||||. |+|++..++..+.+. .|+.++
T Consensus 228 ~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~-----------------PVI~~~~~~~~~~v~~~~~G~~~~- 289 (339)
T 3rhz_A 228 LMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGI-----------------PVIVQEGIANQELIENNGLGWIVK- 289 (339)
T ss_dssp HHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTC-----------------CEEEETTCTTTHHHHHHTCEEEES-
T ss_pred HHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCC-----------------CEEEccChhHHHHHHhCCeEEEeC-
Confidence 999999999888611 1134677899999976 899999888888773 378887
Q ss_pred CCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHHH
Q 004314 497 WNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQD 543 (761)
Q Consensus 497 ~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~ 543 (761)
+.++++++|.. +.+++++.+.++.+++..+....+.+++-+.+
T Consensus 290 -~~~e~~~~i~~---l~~~~~~~m~~na~~~a~~~~~~~f~k~~l~~ 332 (339)
T 3rhz_A 290 -DVEEAIMKVKN---VNEDEYIELVKNVRSFNPILRKGFFTRRLLTE 332 (339)
T ss_dssp -SHHHHHHHHHH---CCHHHHHHHHHHHHHHTHHHHTTHHHHHHHHH
T ss_pred -CHHHHHHHHHH---hCHHHHHHHHHHHHHHHHHhhccHHHHHHHHH
Confidence 57888888875 44667766666666665554444444444433
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=98.71 E-value=3e-07 Score=101.43 Aligned_cols=244 Identities=11% Similarity=0.048 Sum_probs=143.9
Q ss_pred HHHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhh--hcCEEeeeCHHHHH
Q 004314 192 RVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALL--NADLIGFHTFDYAR 269 (761)
Q Consensus 192 ~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll--~~DligF~t~~~~~ 269 (761)
++++..+| |+|.+|+.-...++ .+..+..++|+++ .+.+.-+.+ + ++.+++.+.+. .+|++-..+....+
T Consensus 88 ~~l~~~kP--D~Vlv~gd~~~~~a-alaA~~~~IPv~h-~eaglrs~~--~--~~pee~nR~~~~~~a~~~~~~te~~~~ 159 (385)
T 4hwg_A 88 EVLEKEKP--DAVLFYGDTNSCLS-AIAAKRRKIPIFH-MEAGNRCFD--Q--RVPEEINRKIIDHISDVNITLTEHARR 159 (385)
T ss_dssp HHHHHHCC--SEEEEESCSGGGGG-HHHHHHTTCCEEE-ESCCCCCSC--T--TSTHHHHHHHHHHHCSEEEESSHHHHH
T ss_pred HHHHhcCC--cEEEEECCchHHHH-HHHHHHhCCCEEE-EeCCCcccc--c--cCcHHHHHHHHHhhhceeecCCHHHHH
Confidence 34455687 89999986544445 4444456788754 344332211 1 23344555543 47888888888888
Q ss_pred HHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEec-cccCcccchhhhccchHHHHHHHHHHHcC---CCeEEEeecCc
Q 004314 270 HFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMP-VGIHMGQIESVLRLADKDWRVQELKQQFE---GKTVLLGVDDM 345 (761)
Q Consensus 270 ~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P-~GId~~~f~~~~~~~~~~~~~~~lr~~~~---~~~vil~VdRl 345 (761)
+|++ .|... .+|.+.+ +++|.-.+... .....+++++++ ++.+++..+|.
T Consensus 160 ~l~~-----~G~~~---------------~~I~vtGnp~~D~~~~~~~------~~~~~~~~~~lgl~~~~~iLvt~hr~ 213 (385)
T 4hwg_A 160 YLIA-----EGLPA---------------ELTFKSGSHMPEVLDRFMP------KILKSDILDKLSLTPKQYFLISSHRE 213 (385)
T ss_dssp HHHH-----TTCCG---------------GGEEECCCSHHHHHHHHHH------HHHHCCHHHHTTCCTTSEEEEEECCC
T ss_pred HHHH-----cCCCc---------------CcEEEECCchHHHHHHhhh------hcchhHHHHHcCCCcCCEEEEEeCCc
Confidence 8764 34321 0222333 35664322110 011234556662 45566667775
Q ss_pred c---ccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHH-hcccCCCCCccEEEEcCCC
Q 004314 346 D---IFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRI-NETFGRPGYEPVVFIDKPV 421 (761)
Q Consensus 346 d---~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~i-n~~~g~~~~~pV~~~~~~v 421 (761)
. ..|++..+++|++++.+++ +++ +|... ++ .++ +.+++. +. .+ ....|.+ .+++
T Consensus 214 e~~~~~~~l~~ll~al~~l~~~~-~~~----vv~p~------~p---~~~----~~l~~~~~~-~~--~~~~v~l-~~~l 271 (385)
T 4hwg_A 214 ENVDVKNNLKELLNSLQMLIKEY-NFL----IIFST------HP---RTK----KRLEDLEGF-KE--LGDKIRF-LPAF 271 (385)
T ss_dssp -----CHHHHHHHHHHHHHHHHH-CCE----EEEEE------CH---HHH----HHHHTSGGG-GG--TGGGEEE-CCCC
T ss_pred hhcCcHHHHHHHHHHHHHHHhcC-CeE----EEEEC------Ch---HHH----HHHHHHHHH-hc--CCCCEEE-EcCC
Confidence 4 4478999999999998765 443 43322 12 122 233332 10 00 1234664 4688
Q ss_pred CHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCC-CCCccccc-C-cEEECCCC
Q 004314 422 TLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEF-IGCSPSLS-G-AIRVNPWN 498 (761)
Q Consensus 422 ~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~-~G~~~~l~-~-al~VnP~d 498 (761)
+..++..+|+.||+++..| |.+..||+++|. |+|+... ++..+.+. | +++|.+ |
T Consensus 272 g~~~~~~l~~~adlvvt~S-----Ggv~~EA~alG~-----------------Pvv~~~~~ter~e~v~~G~~~lv~~-d 328 (385)
T 4hwg_A 272 SFTDYVKLQMNAFCILSDS-----GTITEEASILNL-----------------PALNIREAHERPEGMDAGTLIMSGF-K 328 (385)
T ss_dssp CHHHHHHHHHHCSEEEECC-----TTHHHHHHHTTC-----------------CEEECSSSCSCTHHHHHTCCEECCS-S
T ss_pred CHHHHHHHHHhCcEEEECC-----ccHHHHHHHcCC-----------------CEEEcCCCccchhhhhcCceEEcCC-C
Confidence 8889999999999999777 446799999986 6665433 33344442 3 566765 9
Q ss_pred HHHHHHHHHHHHcCCH
Q 004314 499 IEATAEAMHEAIQMNE 514 (761)
Q Consensus 499 ~~~~A~ai~~aL~m~~ 514 (761)
.+++++++.++|+.+.
T Consensus 329 ~~~i~~ai~~ll~d~~ 344 (385)
T 4hwg_A 329 AERVLQAVKTITEEHD 344 (385)
T ss_dssp HHHHHHHHHHHHTTCB
T ss_pred HHHHHHHHHHHHhChH
Confidence 9999999999998763
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.58 E-value=3e-08 Score=104.31 Aligned_cols=160 Identities=14% Similarity=0.087 Sum_probs=95.2
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHHHHHHH-------HHHhcCCCeEEEEcCCChhhHHhhccCC--C--CceEEccC
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIIN-------TLCNDARNTVFVVSGRGRDCLGKWFSPC--K--KLGIAAEH 658 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~-------~L~~d~~n~V~IvSGR~~~~L~~~f~~~--~--~l~liaeh 658 (761)
..|+|+||+||||++.. +++++...|. +++.+++..++++|||+...+.+++..+ + .-.+++.+
T Consensus 21 ~~kliifDlDGTLlds~-----i~~~~~~~l~~~~~~l~~~~~~~g~~~~~~tGr~~~~~~~~~~~~g~~~~~~~~i~~~ 95 (289)
T 3gyg_A 21 PQYIVFCDFDETYFPHT-----IDEQKQQDIYELEDYLEQKSKDGELIIGWVTGSSIESILDKMGRGKFRYFPHFIASDL 95 (289)
T ss_dssp CSEEEEEETBTTTBCSS-----CCHHHHHHHHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHTTCCBCCSEEEETT
T ss_pred CCeEEEEECCCCCcCCC-----CCcchHHHHHHHHHHHHHHHhcCCcEEEEEcCCCHHHHHHHHHhhccCCCCCeEeecC
Confidence 46899999999999832 4555555555 4556678999999999999988877643 1 13477888
Q ss_pred CeEEeecC---Cc----ceeecCcCcCcchHHHHHHHHHHHhcC--C---CccEEEecCceEEEEcccCCCCCchHHHHH
Q 004314 659 GYFMRWSA---DE----EWQNCGQSVDFGWIQIAEPVMKLYTES--T---DGSYIEIKESALVWHHRDADPGFGSSQAKE 726 (761)
Q Consensus 659 Ga~ir~~~---~~----~w~~~~~~~~~~w~~~v~~im~~y~~~--t---~Gs~iE~k~~~l~~hyr~ad~d~~~~qa~e 726 (761)
|..+.... .. .|..... .....+.+.++++.+.+. . ..+..+.+...+.+||+..++... .+
T Consensus 96 g~~i~~~~~ng~~~~~~~~~~~~~--~~~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~----~~ 169 (289)
T 3gyg_A 96 GTEITYFSEHNFGQQDNKWNSRIN--EGFSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEIND----KK 169 (289)
T ss_dssp TTEEEECCSSSTTEECHHHHHHHH--TTCCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHH----HH
T ss_pred CceEEEEcCCCcEeecCchhhhhc--ccCCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccc----hH
Confidence 88777632 11 1221110 112235566776655432 1 233334555677888887653211 12
Q ss_pred HHHHHHHHhcCCCc--EEEe---------CCeEEEEEeCCCCcCC
Q 004314 727 LLDHLESVLANEPA--AVKS---------GQFIVEVKPQVYIQLR 760 (761)
Q Consensus 727 l~~~L~~~l~~~~v--~V~~---------G~~~vEV~p~gvnKG~ 760 (761)
....+...+....+ .+.. |...+|+.|.+.+|+.
T Consensus 170 ~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 214 (289)
T 3gyg_A 170 NLLAIEKICEEYGVSVNINRCNPLAGDPEDSYDVDFIPIGTGKNE 214 (289)
T ss_dssp HHHHHHHHHHHHTEEEEEEECCGGGTCCTTEEEEEEEESCCSHHH
T ss_pred HHHHHHHHHHHcCCCEEEEEccccccCCCCceEEEEEeCCCCHHH
Confidence 22333333322233 3333 3379999999999974
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=98.20 E-value=2e-06 Score=81.09 Aligned_cols=68 Identities=16% Similarity=0.199 Sum_probs=49.9
Q ss_pred ceeEEecCCCcCCCCC-CCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCC---hhhHHhhccCCC-CceEEccCC
Q 004314 591 SRAILFDYDGTVMPQT-SINKAPSQAVISIINTLCNDARNTVFVVSGRG---RDCLGKWFSPCK-KLGIAAEHG 659 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~-~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~---~~~L~~~f~~~~-~l~liaehG 659 (761)
.|+|++|+||||+... +....+.+.++++|++|.+ .|+.|+|+|||+ ...+.+|+.... ...+++.|+
T Consensus 3 ~k~i~~DlDGTL~~~~~~~i~~~~~~~~~al~~l~~-~G~~iii~TgR~~~~~~~~~~~l~~~gi~~~~I~~n~ 75 (142)
T 2obb_A 3 AMTIAVDFDGTIVEHRYPRIGEEIPFAVETLKLLQQ-EKHRLILWSVREGELLDEAIEWCRARGLEFYAANKDY 75 (142)
T ss_dssp CCEEEECCBTTTBCSCTTSCCCBCTTHHHHHHHHHH-TTCEEEECCSCCHHHHHHHHHHHHTTTCCCSEESSSS
T ss_pred CeEEEEECcCCCCCCCCccccccCHHHHHHHHHHHH-CCCEEEEEeCCCcccHHHHHHHHHHcCCCeEEEEcCC
Confidence 6899999999999843 1112345689999999985 699999999998 667778876531 134556554
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=5.2e-05 Score=89.12 Aligned_cols=146 Identities=15% Similarity=0.152 Sum_probs=101.5
Q ss_pred CCCeEEEeecCccccCChHH-HHHHHHHHHH--hCCCCc-CceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCC
Q 004314 334 EGKTVLLGVDDMDIFKGVDL-KLLAMEHLLK--QHPKWQ-GRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRP 409 (761)
Q Consensus 334 ~~~~vil~VdRld~~KGi~~-~l~A~~~ll~--~~P~~~-~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~ 409 (761)
++..+++.|.|+..-||..+ .|..++++++ .+|+.. ..+++|..|....+. .....+-+.+.++++.||.. +
T Consensus 524 pd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIk~i~~va~~in~D---p 599 (796)
T 1l5w_A 524 PQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGY-YLAKNIIFAINKVADVINND---P 599 (796)
T ss_dssp TTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHHTC---T
T ss_pred CCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChhH-HHHHHHHHHHHHHHHHhccc---c
Confidence 46788999999999999999 8888888765 466521 246676655433222 22234455677888877742 2
Q ss_pred CCcc---EEEEcCCCCHHHHHHHHHhcccceeccc--ccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCC
Q 004314 410 GYEP---VVFIDKPVTLSERAAYYTIAECVVVTAV--RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGC 484 (761)
Q Consensus 410 ~~~p---V~~~~~~v~~~el~aly~~ADv~vvtS~--~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~ 484 (761)
.+.. |+|+. ..+..--..+|.+||+++.||. .|.-|+.-+-||.-| .|-+|..-|+
T Consensus 600 ~~~~~lKVvfl~-nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NG------------------aL~iGtLDGa 660 (796)
T 1l5w_A 600 LVGDKLKVVFLP-DYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNG------------------ALTVGTLDGA 660 (796)
T ss_dssp TTGGGEEEEECS-SCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTT------------------CEEEECSCTT
T ss_pred ccCCceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcC------------------CeeecCcCCe
Confidence 3333 77765 5677777889999999999999 799888888888753 4555666676
Q ss_pred cccc------cCcEEECCCCHHHHH
Q 004314 485 SPSL------SGAIRVNPWNIEATA 503 (761)
Q Consensus 485 ~~~l------~~al~VnP~d~~~~A 503 (761)
-.++ .+++++-. +.+++.
T Consensus 661 nvEi~e~vG~~NgF~FG~-~~~ev~ 684 (796)
T 1l5w_A 661 NVEIAEKVGEENIFIFGH-TVEQVK 684 (796)
T ss_dssp HHHHHHHHCGGGSEECSC-CHHHHH
T ss_pred eeehhhccCCCcEEEecC-CHHHHH
Confidence 5443 24788876 777766
|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
Probab=97.94 E-value=0.00035 Score=82.50 Aligned_cols=148 Identities=14% Similarity=0.132 Sum_probs=101.0
Q ss_pred CCCeEEEeecCccccCChHHH-HHHHHHHH--HhCCCCcC-ceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCC
Q 004314 334 EGKTVLLGVDDMDIFKGVDLK-LLAMEHLL--KQHPKWQG-RAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRP 409 (761)
Q Consensus 334 ~~~~vil~VdRld~~KGi~~~-l~A~~~ll--~~~P~~~~-~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~ 409 (761)
++..+++.|.|+..-||..+. |..+++++ ..+|+..= .+++|..|....+. .....+-+.+.++++.+|.. +
T Consensus 548 pd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIkli~~va~~in~D---p 623 (824)
T 2gj4_A 548 PNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGY-HMAKMIIKLITAIGDVVNHD---P 623 (824)
T ss_dssp TTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHTTC---T
T ss_pred CCcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEEEEeCCHhH-HHHHHHHHHHHHHHHHhccC---c
Confidence 467889999999999999998 88888885 35665321 34576555433222 22234455678888888743 2
Q ss_pred CCc---cEEEEcCCCCHHHHHHHHHhcccceeccc--ccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCC
Q 004314 410 GYE---PVVFIDKPVTLSERAAYYTIAECVVVTAV--RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGC 484 (761)
Q Consensus 410 ~~~---pV~~~~~~v~~~el~aly~~ADv~vvtS~--~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~ 484 (761)
... .|+|+. ..+..--..+|.+||+++.||. .|.-|+.-+-||.-| .|-+|..-|+
T Consensus 624 ~v~~~lKVvFl~-nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNG------------------aLtigtlDGa 684 (824)
T 2gj4_A 624 VVGDRLRVIFLE-NYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNG------------------ALTIGTMDGA 684 (824)
T ss_dssp TTGGGEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTT------------------CEEEECSCTT
T ss_pred ccCCceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcC------------------ceEEEEecCc
Confidence 233 478775 4667777789999999999999 799998888888743 4555556665
Q ss_pred cccc----c--CcEEECCCCHHHHHHHH
Q 004314 485 SPSL----S--GAIRVNPWNIEATAEAM 506 (761)
Q Consensus 485 ~~~l----~--~al~VnP~d~~~~A~ai 506 (761)
..++ . +++++... .+++ +++
T Consensus 685 nvEi~e~vG~~Ngf~FG~~-~~ev-~~l 710 (824)
T 2gj4_A 685 NVEMAEEAGEENFFIFGMR-VEDV-DRL 710 (824)
T ss_dssp HHHHHHHHCGGGSEECSCC-HHHH-HHH
T ss_pred cchhhhccCCCCEEEeCCc-HHHH-HHH
Confidence 5332 2 47888775 6666 444
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=97.93 E-value=3.4e-05 Score=90.63 Aligned_cols=150 Identities=11% Similarity=0.129 Sum_probs=101.0
Q ss_pred CCCeEEEeecCccccCChHH-HHHHHHHHHH--hCCCCc-CceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCC
Q 004314 334 EGKTVLLGVDDMDIFKGVDL-KLLAMEHLLK--QHPKWQ-GRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRP 409 (761)
Q Consensus 334 ~~~~vil~VdRld~~KGi~~-~l~A~~~ll~--~~P~~~-~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~ 409 (761)
++..+++.|.|+..-||..+ .+..++++++ .+|+.. ..+++|..|....+. .....+-+.+.++++-||..=.-.
T Consensus 514 pd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIk~i~~va~~in~dp~~~ 592 (796)
T 2c4m_A 514 PESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPGY-VRAKAIIKLINSIADLVNNDPEVS 592 (796)
T ss_dssp TTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHHTCTTTT
T ss_pred CCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHhH-HHHHHHHHHHHHHHHHhccccccC
Confidence 46788999999999999999 8999998875 566521 236676655433222 222344556778888787521111
Q ss_pred CCccEEEEcCCCCHHHHHHHHHhcccceeccc--ccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccc
Q 004314 410 GYEPVVFIDKPVTLSERAAYYTIAECVVVTAV--RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPS 487 (761)
Q Consensus 410 ~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~--~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~ 487 (761)
+.-.|+|+. ..+..--..+|.+||+++.||. .|.-|+.-+-||.-| .|-+|..-|+-.+
T Consensus 593 ~~lKVvFl~-nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NG------------------aL~iGtLDGanvE 653 (796)
T 2c4m_A 593 PLLKVVFVE-NYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMNG------------------ALTLGTMDGANVE 653 (796)
T ss_dssp TTEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTT------------------CEEEEESSTHHHH
T ss_pred CceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcC------------------CeEEeccCCeEee
Confidence 222488775 5667777889999999999999 799998888888753 4455666665444
Q ss_pred c------cCcEEECC--CCHHHHH
Q 004314 488 L------SGAIRVNP--WNIEATA 503 (761)
Q Consensus 488 l------~~al~VnP--~d~~~~A 503 (761)
+ .+++++-. .+++++-
T Consensus 654 i~e~vG~~NgF~FG~~~~ev~~l~ 677 (796)
T 2c4m_A 654 IVDSVGEENAYIFGARVEELPALR 677 (796)
T ss_dssp HHHHHCGGGSEEESCCTTTHHHHH
T ss_pred hhhhcCCCcEEEecCchhhHHHHH
Confidence 3 24788765 5555544
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=0.00016 Score=78.99 Aligned_cols=99 Identities=13% Similarity=-0.010 Sum_probs=62.5
Q ss_pred cEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCC----CCCcccc
Q 004314 413 PVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEF----IGCSPSL 488 (761)
Q Consensus 413 pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~----~G~~~~l 488 (761)
.|.+. +.++ ...++..||++|. .|-+.+..|||+||. |+|+.-+ .+.++.+
T Consensus 285 ~v~~~-~~~~---~~~ll~~ad~~v~----~gG~~t~~Ea~~~G~-----------------P~v~~p~~~~q~~~a~~~ 339 (398)
T 4fzr_A 285 GVLAA-GQFP---LSAIMPACDVVVH----HGGHGTTLTCLSEGV-----------------PQVSVPVIAEVWDSARLL 339 (398)
T ss_dssp TEEEE-SCCC---HHHHGGGCSEEEE----CCCHHHHHHHHHTTC-----------------CEEECCCSGGGHHHHHHH
T ss_pred cEEEe-CcCC---HHHHHhhCCEEEe----cCCHHHHHHHHHhCC-----------------CEEecCCchhHHHHHHHH
Confidence 36654 5666 4567778999994 444678999999986 7777433 3445545
Q ss_pred c---CcEEECCC--CHHHHHHHHHHHHcCCHHHHHHHHHH-HhhHHhhCCHHHHHH
Q 004314 489 S---GAIRVNPW--NIEATAEAMHEAIQMNEAEKQLRHEK-HYRYVSTHDVAYWAR 538 (761)
Q Consensus 489 ~---~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~-~~~~v~~~~~~~Wa~ 538 (761)
. .|+++++. |.++++++|.++|+.+. .+.++++ ..++.........++
T Consensus 340 ~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 393 (398)
T 4fzr_A 340 HAAGAGVEVPWEQAGVESVLAACARIRDDSS--YVGNARRLAAEMATLPTPADIVR 393 (398)
T ss_dssp HHTTSEEECC-------CHHHHHHHHHHCTH--HHHHHHHHHHHHTTSCCHHHHHH
T ss_pred HHcCCEEecCcccCCHHHHHHHHHHHHhCHH--HHHHHHHHHHHHHcCCCHHHHHH
Confidence 2 37888887 78999999999999764 3444444 445555565555444
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=97.85 E-value=6e-05 Score=86.81 Aligned_cols=153 Identities=6% Similarity=-0.068 Sum_probs=97.5
Q ss_pred CeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEE-EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccE
Q 004314 336 KTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQ-IANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPV 414 (761)
Q Consensus 336 ~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq-i~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV 414 (761)
..++.+..|+ .|..+..++++.+++++.|+.+ .++. ++. +.+.. ..+.+++.+ ..|. ..|
T Consensus 441 ~v~Fg~fn~~--~Ki~p~~l~~WarIL~~vP~s~---L~l~~~g~---~~g~~-~~~~~~~~~--~GI~--------~Rv 501 (631)
T 3q3e_A 441 VVNIGIASTT--MKLNPYFLEALKAIRDRAKVKV---HFHFALGQ---SNGIT-HPYVERFIK--SYLG--------DSA 501 (631)
T ss_dssp EEEEEEEECS--TTCCHHHHHHHHHHHHHCSSEE---EEEEEESS---CCGGG-HHHHHHHHH--HHHG--------GGE
T ss_pred eEEEEECCcc--ccCCHHHHHHHHHHHHhCCCcE---EEEEecCC---Cchhh-HHHHHHHHH--cCCC--------ccE
Confidence 4455556775 7999999999999999999642 2222 331 12232 222233222 1232 246
Q ss_pred EEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc-----
Q 004314 415 VFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS----- 489 (761)
Q Consensus 415 ~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~----- 489 (761)
+|. +.++.++..++|+.||+|+.|+.+.| |++++|||+||. |+|...-.+.+.-++
T Consensus 502 ~F~-g~~p~~e~la~y~~aDIfLDpfpy~G-gtTtlEALwmGV-----------------PVVTl~G~~~asRvgaSlL~ 562 (631)
T 3q3e_A 502 TAH-PHSPYHQYLRILHNCDMMVNPFPFGN-TNGIIDMVTLGL-----------------VGVCKTGAEVHEHIDEGLFK 562 (631)
T ss_dssp EEE-CCCCHHHHHHHHHTCSEEECCSSSCC-SHHHHHHHHTTC-----------------CEEEECCSSHHHHHHHHHHH
T ss_pred EEc-CCCCHHHHHHHHhcCcEEEeCCcccC-ChHHHHHHHcCC-----------------CEEeccCCcHHHHhHHHHHH
Confidence 654 68999999999999999999998876 999999999976 777643322221111
Q ss_pred --C--cEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHH
Q 004314 490 --G--AIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYV 528 (761)
Q Consensus 490 --~--al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v 528 (761)
| .++|- .|.++.++...++.++++ .++...+++++.+
T Consensus 563 ~~GLpE~LIA-~d~eeYv~~Av~La~D~~-~l~~LR~~Lr~~~ 603 (631)
T 3q3e_A 563 RLGLPEWLIA-NTVDEYVERAVRLAENHQ-ERLELRRYIIENN 603 (631)
T ss_dssp HTTCCGGGEE-SSHHHHHHHHHHHHHCHH-HHHHHHHHHHHSC
T ss_pred hcCCCcceec-CCHHHHHHHHHHHhCCHH-HHHHHHHHHHHHh
Confidence 1 21222 378999988888888764 4444444444443
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=97.84 E-value=1.9e-05 Score=72.70 Aligned_cols=49 Identities=16% Similarity=0.307 Sum_probs=39.7
Q ss_pred eeEEecCCCcCCCCCCCC---CCCCHHHHHHHHHHHhcCCCeEEEEcCCChhh
Q 004314 592 RAILFDYDGTVMPQTSIN---KAPSQAVISIINTLCNDARNTVFVVSGRGRDC 641 (761)
Q Consensus 592 rlI~lDyDGTL~~~~~~~---~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~ 641 (761)
|+|++|+||||++..... ..+++.+.++|++|.+ .+..++|+|||+...
T Consensus 2 k~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~l~~l~~-~Gi~~~iaTGR~~~~ 53 (126)
T 1xpj_A 2 KKLIVDLDGTLTQANTSDYRNVLPRLDVIEQLREYHQ-LGFEIVISTARNMRT 53 (126)
T ss_dssp CEEEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHHHH-TTCEEEEEECTTTTT
T ss_pred CEEEEecCCCCCCCCCCccccCCCCHHHHHHHHHHHh-CCCeEEEEeCCChhh
Confidence 799999999999743110 1467899999999986 599999999999754
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=97.77 E-value=5.3e-05 Score=82.97 Aligned_cols=157 Identities=12% Similarity=0.030 Sum_probs=99.7
Q ss_pred CCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccE
Q 004314 335 GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPV 414 (761)
Q Consensus 335 ~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV 414 (761)
.+.+++++|++. .|+...+..+++.+. +. ++ .++.++++. .+.+++ .+ + ...|
T Consensus 242 ~~~vlv~~G~~~-~~~~~~~~~~~~~l~-~~-~~----~~~~~~g~~----~~~~~l----~~----~--------~~~v 294 (412)
T 3otg_A 242 RPLVYLTLGTSS-GGTVEVLRAAIDGLA-GL-DA----DVLVASGPS----LDVSGL----GE----V--------PANV 294 (412)
T ss_dssp SCEEEEECTTTT-CSCHHHHHHHHHHHH-TS-SS----EEEEECCSS----CCCTTC----CC----C--------CTTE
T ss_pred CCEEEEEcCCCC-cCcHHHHHHHHHHHH-cC-CC----EEEEEECCC----CChhhh----cc----C--------CCcE
Confidence 456788899996 667666666666553 33 22 244444322 111111 10 0 1246
Q ss_pred EEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCC----Cccccc-
Q 004314 415 VFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIG----CSPSLS- 489 (761)
Q Consensus 415 ~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~~~l~- 489 (761)
.+. +.++ +..+|+.||++|.+| | ..+.+|||+||. |+|+....+ .++.+.
T Consensus 295 ~~~-~~~~---~~~~l~~ad~~v~~~---g-~~t~~Ea~a~G~-----------------P~v~~p~~~~q~~~~~~v~~ 349 (412)
T 3otg_A 295 RLE-SWVP---QAALLPHVDLVVHHG---G-SGTTLGALGAGV-----------------PQLSFPWAGDSFANAQAVAQ 349 (412)
T ss_dssp EEE-SCCC---HHHHGGGCSEEEESC---C-HHHHHHHHHHTC-----------------CEEECCCSTTHHHHHHHHHH
T ss_pred EEe-CCCC---HHHHHhcCcEEEECC---c-hHHHHHHHHhCC-----------------CEEecCCchhHHHHHHHHHH
Confidence 655 5563 778999999999765 2 268999999986 788855543 455552
Q ss_pred --CcEEECCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHHHH
Q 004314 490 --GAIRVNPW--NIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDM 544 (761)
Q Consensus 490 --~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l 544 (761)
.|++++|. |+++++++|.++|++++ .++...+..+++...+++..-++.+.+-+
T Consensus 350 ~g~g~~~~~~~~~~~~l~~ai~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 407 (412)
T 3otg_A 350 AGAGDHLLPDNISPDSVSGAAKRLLAEES-YRAGARAVAAEIAAMPGPDEVVRLLPGFA 407 (412)
T ss_dssp HTSEEECCGGGCCHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHSCCHHHHHTTHHHHH
T ss_pred cCCEEecCcccCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHhcCCCHHHHHHHHHHHh
Confidence 48889887 89999999999999753 34444445666667777776666554443
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=97.62 E-value=4.3e-05 Score=83.21 Aligned_cols=154 Identities=12% Similarity=0.073 Sum_probs=98.5
Q ss_pred CCeEEEeecCccccCCh-HHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCcc
Q 004314 335 GKTVLLGVDDMDIFKGV-DLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEP 413 (761)
Q Consensus 335 ~~~vil~VdRld~~KGi-~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~p 413 (761)
.+.+++++|++...|+. ...+.++.+. +++|+++ ++.++.+ .+.+.+ . .+ ...
T Consensus 218 ~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~----~v~~~~~-----~~~~~l----~----~~--------~~~ 271 (391)
T 3tsa_A 218 ARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVE----AVIAVPP-----EHRALL----T----DL--------PDN 271 (391)
T ss_dssp SEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEE----EEEECCG-----GGGGGC----T----TC--------CTT
T ss_pred CCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeE----EEEEECC-----cchhhc----c----cC--------CCC
Confidence 35677888999887666 8888888887 7787655 6655532 221111 1 00 123
Q ss_pred EEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCC----CCCcccc-
Q 004314 414 VVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEF----IGCSPSL- 488 (761)
Q Consensus 414 V~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~----~G~~~~l- 488 (761)
|.+ .+.++..+ ++..||++|. .|-..+..|+|+||. |+|+.-+ .+.++.+
T Consensus 272 v~~-~~~~~~~~---ll~~ad~~v~----~~G~~t~~Ea~~~G~-----------------P~v~~p~~~~q~~~a~~~~ 326 (391)
T 3tsa_A 272 ARI-AESVPLNL---FLRTCELVIC----AGGSGTAFTATRLGI-----------------PQLVLPQYFDQFDYARNLA 326 (391)
T ss_dssp EEE-CCSCCGGG---TGGGCSEEEE----CCCHHHHHHHHHTTC-----------------CEEECCCSTTHHHHHHHHH
T ss_pred EEE-eccCCHHH---HHhhCCEEEe----CCCHHHHHHHHHhCC-----------------CEEecCCcccHHHHHHHHH
Confidence 554 45677655 4599999995 344468899999986 6776433 2333434
Q ss_pred --cCcEEECC----CCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHH
Q 004314 489 --SGAIRVNP----WNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSF 540 (761)
Q Consensus 489 --~~al~VnP----~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~ 540 (761)
..|++++| .|.++++++|.++|+++. .++...+...++........-++.+
T Consensus 327 ~~g~g~~~~~~~~~~~~~~l~~ai~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i 383 (391)
T 3tsa_A 327 AAGAGICLPDEQAQSDHEQFTDSIATVLGDTG-FAAAAIKLSDEITAMPHPAALVRTL 383 (391)
T ss_dssp HTTSEEECCSHHHHTCHHHHHHHHHHHHTCTH-HHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HcCCEEecCcccccCCHHHHHHHHHHHHcCHH-HHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 23788998 889999999999999864 2333333344555556666555543
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00041 Score=76.53 Aligned_cols=103 Identities=14% Similarity=-0.026 Sum_probs=69.2
Q ss_pred cEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCC----Ccccc
Q 004314 413 PVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIG----CSPSL 488 (761)
Q Consensus 413 pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~~~l 488 (761)
.|.+. +.+++. .+|+.||++|..+ |. .+.+|||+||. |+|++...| .++.+
T Consensus 284 ~v~~~-~~~~~~---~~l~~ad~~v~~~---G~-~t~~Ea~~~G~-----------------P~i~~p~~~~q~~~a~~~ 338 (430)
T 2iyf_A 284 NVEVH-DWVPQL---AILRQADLFVTHA---GA-GGSQEGLATAT-----------------PMIAVPQAVDQFGNADML 338 (430)
T ss_dssp TEEEE-SSCCHH---HHHTTCSEEEECC---CH-HHHHHHHHTTC-----------------CEEECCCSHHHHHHHHHH
T ss_pred CeEEE-ecCCHH---HHhhccCEEEECC---Cc-cHHHHHHHhCC-----------------CEEECCCccchHHHHHHH
Confidence 46654 567765 6899999988754 43 68999999976 888876654 23333
Q ss_pred ---cCcEEECCC--CHHHHHHHHHHHHcCCHHHHHHHHHH-HhhHHhhCCHHHHHHHHHH
Q 004314 489 ---SGAIRVNPW--NIEATAEAMHEAIQMNEAEKQLRHEK-HYRYVSTHDVAYWARSFFQ 542 (761)
Q Consensus 489 ---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~-~~~~v~~~~~~~Wa~~~l~ 542 (761)
..|+.+++. |.++++++|.++|+.+ +.+.++.+ ..+....+.+...++.+.+
T Consensus 339 ~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 396 (430)
T 2iyf_A 339 QGLGVARKLATEEATADLLRETALALVDDP--EVARRLRRIQAEMAQEGGTRRAADLIEA 396 (430)
T ss_dssp HHTTSEEECCCC-CCHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHHHCHHHHHHHHHHT
T ss_pred HHcCCEEEcCCCCCCHHHHHHHHHHHHcCH--HHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 247888877 8899999999999864 33334443 4444445555555554433
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.39 E-value=0.0001 Score=75.88 Aligned_cols=54 Identities=19% Similarity=0.297 Sum_probs=43.8
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcC---CChhhHHhhccC
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSG---RGRDCLGKWFSP 648 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSG---R~~~~L~~~f~~ 648 (761)
+.|+|+||+||||++.. .+.++++++|++|.+ .+..|+++|| |+...+.+.+..
T Consensus 7 ~~kli~~DlDGTLl~~~----~~~~~~~~ai~~l~~-~Gi~v~l~Tgr~~r~~~~~~~~l~~ 63 (268)
T 3qgm_A 7 DKKGYIIDIDGVIGKSV----TPIPEGVEGVKKLKE-LGKKIIFVSNNSTRSRRILLERLRS 63 (268)
T ss_dssp CCSEEEEECBTTTEETT----EECHHHHHHHHHHHH-TTCEEEEEECCSSSCHHHHHHHHHH
T ss_pred cCCEEEEcCcCcEECCC----EeCcCHHHHHHHHHH-cCCeEEEEeCcCCCCHHHHHHHHHH
Confidence 47899999999999732 356789999999986 6999999999 667766666653
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0012 Score=71.53 Aligned_cols=137 Identities=14% Similarity=0.029 Sum_probs=87.0
Q ss_pred CeEEEeecCcccc-------CChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCC
Q 004314 336 KTVLLGVDDMDIF-------KGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGR 408 (761)
Q Consensus 336 ~~vil~VdRld~~-------KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~ 408 (761)
..+++++|++... +.+...++|++++ +++ ++.+++ +++. +++.. +.
T Consensus 211 ~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~-----~~~----~~~~~g-----~~~~----~~l~~----~~----- 263 (384)
T 2p6p_A 211 QRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW-----DVE----LIVAAP-----DTVA----EALRA----EV----- 263 (384)
T ss_dssp CEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT-----TCE----EEEECC-----HHHH----HHHHH----HC-----
T ss_pred CEEEEECCCCCccccccccHHHHHHHHHHHhcC-----CcE----EEEEeC-----CCCH----HhhCC----CC-----
Confidence 5688999999875 5677777776542 232 444431 1222 12221 11
Q ss_pred CCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCC----C
Q 004314 409 PGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIG----C 484 (761)
Q Consensus 409 ~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~ 484 (761)
..|.+ +.++.. .+|..||++|..+ | ..+..|+|+||. |+|+..+.+ .
T Consensus 264 ---~~v~~--~~~~~~---~~l~~~d~~v~~~---G-~~t~~Ea~~~G~-----------------P~v~~p~~~dq~~~ 314 (384)
T 2p6p_A 264 ---PQARV--GWTPLD---VVAPTCDLLVHHA---G-GVSTLTGLSAGV-----------------PQLLIPKGSVLEAP 314 (384)
T ss_dssp ---TTSEE--ECCCHH---HHGGGCSEEEECS---C-TTHHHHHHHTTC-----------------CEEECCCSHHHHHH
T ss_pred ---CceEE--cCCCHH---HHHhhCCEEEeCC---c-HHHHHHHHHhCC-----------------CEEEccCcccchHH
Confidence 13554 567754 4679999999753 4 457899999986 778776543 3
Q ss_pred cccc---cCcEEECCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhh
Q 004314 485 SPSL---SGAIRVNPW--NIEATAEAMHEAIQMNEAEKQLRHEKHYRYVST 530 (761)
Q Consensus 485 ~~~l---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~ 530 (761)
++.+ ..|+.+++. +.++++++|.++|+.+ +.+.++++..+.+..
T Consensus 315 a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~~~ 363 (384)
T 2p6p_A 315 ARRVADYGAAIALLPGEDSTEAIADSCQELQAKD--TYARRAQDLSREISG 363 (384)
T ss_dssp HHHHHHHTSEEECCTTCCCHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHT
T ss_pred HHHHHHCCCeEecCcCCCCHHHHHHHHHHHHcCH--HHHHHHHHHHHHHHh
Confidence 3334 237888875 7899999999999864 445556555555544
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.30 E-value=8.7e-05 Score=76.47 Aligned_cols=54 Identities=17% Similarity=0.228 Sum_probs=43.4
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcC---CChhhHHhhccC
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSG---RGRDCLGKWFSP 648 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSG---R~~~~L~~~f~~ 648 (761)
+.|+|++|+||||++. ..+.++++++|++|.+ .|..|+++|| |+...+.+.+..
T Consensus 5 ~~kli~~DlDGTLl~~----~~~~~~~~~ai~~l~~-~Gi~v~laTgrs~r~~~~~~~~l~~ 61 (266)
T 3pdw_A 5 TYKGYLIDLDGTMYNG----TEKIEEACEFVRTLKD-RGVPYLFVTNNSSRTPKQVADKLVS 61 (266)
T ss_dssp CCSEEEEECSSSTTCH----HHHHHHHHHHHHHHHH-TTCCEEEEESCCSSCHHHHHHHHHH
T ss_pred cCCEEEEeCcCceEeC----CEeCccHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHH
Confidence 3789999999999973 3356789999999996 6999999988 666666666653
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00036 Score=66.77 Aligned_cols=132 Identities=14% Similarity=0.105 Sum_probs=85.2
Q ss_pred CCeEEEeecCcc---ccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCC
Q 004314 335 GKTVLLGVDDMD---IFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGY 411 (761)
Q Consensus 335 ~~~vil~VdRld---~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~ 411 (761)
...+++++|++. +.|++...++|++++ + + .++.++++.. .+ .+ +
T Consensus 21 ~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~----~-~----~~~~~~g~~~---~~-------------~~----~---- 67 (170)
T 2o6l_A 21 NGVVVFSLGSMVSNMTEERANVIASALAQI----P-Q----KVLWRFDGNK---PD-------------TL----G---- 67 (170)
T ss_dssp TCEEEEECCSCCTTCCHHHHHHHHHHHTTS----S-S----EEEEECCSSC---CT-------------TC----C----
T ss_pred CCEEEEECCCCcccCCHHHHHHHHHHHHhC----C-C----eEEEEECCcC---cc-------------cC----C----
Confidence 467899999985 667777777777532 2 2 2444443211 00 01 1
Q ss_pred ccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCC----Cccc
Q 004314 412 EPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIG----CSPS 487 (761)
Q Consensus 412 ~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~~~ 487 (761)
..|.+ .+.++..++.++ ..||++|.. -| +.+..|+|+||. |+|+..+.+ .++.
T Consensus 68 ~~v~~-~~~~~~~~~l~~-~~ad~~I~~---~G-~~t~~Ea~~~G~-----------------P~i~~p~~~~Q~~na~~ 124 (170)
T 2o6l_A 68 LNTRL-YKWIPQNDLLGH-PKTRAFITH---GG-ANGIYEAIYHGI-----------------PMVGIPLFADQPDNIAH 124 (170)
T ss_dssp TTEEE-ESSCCHHHHHTS-TTEEEEEEC---CC-HHHHHHHHHHTC-----------------CEEECCCSTTHHHHHHH
T ss_pred CcEEE-ecCCCHHHHhcC-CCcCEEEEc---CC-ccHHHHHHHcCC-----------------CEEeccchhhHHHHHHH
Confidence 13554 468888777654 999999963 33 489999999986 777776642 2333
Q ss_pred c---cCcEEECCC--CHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 004314 488 L---SGAIRVNPW--NIEATAEAMHEAIQMNEAEKQLRHEKH 524 (761)
Q Consensus 488 l---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~ 524 (761)
+ ..|+.+++. +.++++++|.++|+.+ +.+.++++.
T Consensus 125 l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~--~~~~~a~~~ 164 (170)
T 2o6l_A 125 MKARGAAVRVDFNTMSSTDLLNALKRVINDP--SYKENVMKL 164 (170)
T ss_dssp HHTTTSEEECCTTTCCHHHHHHHHHHHHHCH--HHHHHHHHH
T ss_pred HHHcCCeEEeccccCCHHHHHHHHHHHHcCH--HHHHHHHHH
Confidence 3 237888876 8899999999999854 334444443
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00014 Score=74.97 Aligned_cols=54 Identities=19% Similarity=0.222 Sum_probs=45.5
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEc---CCChhhHHhhccC
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVS---GRGRDCLGKWFSP 648 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvS---GR~~~~L~~~f~~ 648 (761)
+.|+|+||+||||++. +... ++++++|++|.+ .+..|+++| ||+...+.+.+..
T Consensus 4 ~~kli~~DlDGTLl~~---~~~i-~~~~eal~~l~~-~G~~vvl~Tn~~gr~~~~~~~~l~~ 60 (264)
T 3epr_A 4 AYKGYLIDLDGTIYKG---KSRI-PAGERFIERLQE-KGIPYMLVTNNTTRTPESVQEMLRG 60 (264)
T ss_dssp CCCEEEECCBTTTEET---TEEC-HHHHHHHHHHHH-HTCCEEEEECCCSSCHHHHHHHHHT
T ss_pred CCCEEEEeCCCceEeC---CEEC-cCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHH
Confidence 4789999999999983 3445 799999999996 599999999 8888888877764
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00046 Score=67.29 Aligned_cols=69 Identities=12% Similarity=0.063 Sum_probs=50.0
Q ss_pred HHHHHHHHHhccceeEEecCCCcCCCCC---------------------CCCCCCCHHHHHHHHHHHhcCCCeEEEEcCC
Q 004314 579 IDAIVSAYLRSKSRAILFDYDGTVMPQT---------------------SINKAPSQAVISIINTLCNDARNTVFVVSGR 637 (761)
Q Consensus 579 ~~~i~~~y~~s~~rlI~lDyDGTL~~~~---------------------~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR 637 (761)
.+.+...--....|+|++|+||||.+.. .....+.+.+.++|++|.+ .+..++|+||+
T Consensus 15 ~~~~~~~~m~~~~k~vifDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~-~G~~v~ivT~~ 93 (187)
T 2wm8_A 15 TENLYFQSMARLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQS-LGVPGAAASRT 93 (187)
T ss_dssp HHHHHHHHHHTSCSEEEECSBTTTBSSCTTTSSCSCCEECTTSCEECTTCCEECCCTTHHHHHHHHHH-HTCCEEEEECC
T ss_pred CchhHHHHHHhccCEEEEcCCCCcchHHHhhccCcchhhhcccchhhccCcccCcchhHHHHHHHHHH-CCceEEEEeCC
Confidence 3333333233457899999999999531 0123467889999999986 48999999999
Q ss_pred C-hhhHHhhccC
Q 004314 638 G-RDCLGKWFSP 648 (761)
Q Consensus 638 ~-~~~L~~~f~~ 648 (761)
+ ...++.++..
T Consensus 94 ~~~~~~~~~l~~ 105 (187)
T 2wm8_A 94 SEIEGANQLLEL 105 (187)
T ss_dssp SCHHHHHHHHHH
T ss_pred CChHHHHHHHHH
Confidence 9 6887777764
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0032 Score=68.34 Aligned_cols=147 Identities=15% Similarity=0.070 Sum_probs=82.7
Q ss_pred CeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEE
Q 004314 336 KTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVV 415 (761)
Q Consensus 336 ~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~ 415 (761)
..+++..|++...+.-....+|++++ +.-. ++.++.+++. .+++.+++. ....+. ++.
T Consensus 181 ~~ilv~gGs~g~~~~~~~~~~al~~l----~~~~-~~~vi~~~G~-----~~~~~~~~~----~~~~~~--------~~~ 238 (365)
T 3s2u_A 181 VNLLVLGGSLGAEPLNKLLPEALAQV----PLEI-RPAIRHQAGR-----QHAEITAER----YRTVAV--------EAD 238 (365)
T ss_dssp CEEEECCTTTTCSHHHHHHHHHHHTS----CTTT-CCEEEEECCT-----TTHHHHHHH----HHHTTC--------CCE
T ss_pred cEEEEECCcCCccccchhhHHHHHhc----cccc-ceEEEEecCc-----cccccccce----eccccc--------ccc
Confidence 44566667877665555555565544 3221 2334444421 223333322 222221 233
Q ss_pred EEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCc--------cc
Q 004314 416 FIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCS--------PS 487 (761)
Q Consensus 416 ~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~--------~~ 487 (761)
++ +++ +++..+|+.||++|..| | +.+..|+++||. |.|+..+.+.. +.
T Consensus 239 v~-~f~--~dm~~~l~~aDlvI~ra---G-~~Tv~E~~a~G~-----------------P~Ilip~p~~~~~~Q~~NA~~ 294 (365)
T 3s2u_A 239 VA-PFI--SDMAAAYAWADLVICRA---G-ALTVSELTAAGL-----------------PAFLVPLPHAIDDHQTRNAEF 294 (365)
T ss_dssp EE-SCC--SCHHHHHHHCSEEEECC---C-HHHHHHHHHHTC-----------------CEEECC-----CCHHHHHHHH
T ss_pred cc-cch--hhhhhhhccceEEEecC---C-cchHHHHHHhCC-----------------CeEEeccCCCCCcHHHHHHHH
Confidence 33 333 47999999999988543 5 578889999986 66665554432 22
Q ss_pred c-c--CcEEECCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHh
Q 004314 488 L-S--GAIRVNPW--NIEATAEAMHEAIQMNEAEKQLRHEKHYRYVS 529 (761)
Q Consensus 488 l-~--~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~ 529 (761)
+ . .|++++.. ++++++++|.++|++|+ .++.+.++.++...
T Consensus 295 l~~~G~a~~l~~~~~~~~~L~~~i~~ll~d~~-~~~~m~~~a~~~~~ 340 (365)
T 3s2u_A 295 LVRSGAGRLLPQKSTGAAELAAQLSEVLMHPE-TLRSMADQARSLAK 340 (365)
T ss_dssp HHTTTSEEECCTTTCCHHHHHHHHHHHHHCTH-HHHHHHHHHHHTCC
T ss_pred HHHCCCEEEeecCCCCHHHHHHHHHHHHCCHH-HHHHHHHHHHhcCC
Confidence 3 2 37777655 48999999999999874 33334444444433
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=97.02 E-value=0.00037 Score=71.70 Aligned_cols=67 Identities=12% Similarity=0.139 Sum_probs=51.5
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEc---CCChhhHHhhccCC----CCceEEccCCeE
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVS---GRGRDCLGKWFSPC----KKLGIAAEHGYF 661 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvS---GR~~~~L~~~f~~~----~~l~liaehGa~ 661 (761)
+.+.|++|+||||++. ..++++++++|++|.+ .+..|+++| ||+...+.+++..+ +.-.++++||+.
T Consensus 16 ~~~~v~~DlDGTLl~~----~~~~~~~~~~l~~l~~-~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~~~~~ii~~~~~~ 89 (271)
T 1vjr_A 16 KIELFILDMDGTFYLD----DSLLPGSLEFLETLKE-KNKRFVFFTNNSSLGAQDYVRKLRNMGVDVPDDAVVTSGEIT 89 (271)
T ss_dssp GCCEEEECCBTTTEET----TEECTTHHHHHHHHHH-TTCEEEEEESCTTSCHHHHHHHHHHTTCCCCGGGEEEHHHHH
T ss_pred CCCEEEEcCcCcEEeC----CEECcCHHHHHHHHHH-cCCeEEEEECCCCCCHHHHHHHHHHcCCCCChhhEEcHHHHH
Confidence 5789999999999984 3356789999999986 689999999 99999988888643 111355666554
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=97.00 E-value=0.00033 Score=68.11 Aligned_cols=58 Identities=24% Similarity=0.194 Sum_probs=45.9
Q ss_pred cceeEEecCCCcCCCCCCC---C----CCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 590 KSRAILFDYDGTVMPQTSI---N----KAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~---~----~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
..|+|++|+||||++.... . ...+++..++|++|.+ .+..++|+|||+...++..+..
T Consensus 7 ~ik~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~-~G~~~~i~Tg~~~~~~~~~~~~ 71 (180)
T 1k1e_A 7 NIKFVITDVDGVLTDGQLHYDANGEAIKSFHVRDGLGIKMLMD-ADIQVAVLSGRDSPILRRRIAD 71 (180)
T ss_dssp GCCEEEEECTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHH-TTCEEEEEESCCCHHHHHHHHH
T ss_pred CCeEEEEeCCCCcCCCCeeeccCcceeeeeccchHHHHHHHHH-CCCeEEEEeCCCcHHHHHHHHH
Confidence 4689999999999974310 0 1245678899999986 5899999999999988888764
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=96.91 E-value=0.00041 Score=65.80 Aligned_cols=59 Identities=22% Similarity=0.122 Sum_probs=46.3
Q ss_pred cceeEEecCCCcCCCCCC-------CCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC
Q 004314 590 KSRAILFDYDGTVMPQTS-------INKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~-------~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~ 649 (761)
..|+|++|+||||++... .....+++..++|++|.+ .+..++|+||++...++..+..+
T Consensus 8 ~~k~v~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~g~~~~i~T~~~~~~~~~~l~~~ 73 (162)
T 2p9j_A 8 KLKLLIMDIDGVLTDGKLYYTEHGETIKVFNVLDGIGIKLLQK-MGITLAVISGRDSAPLITRLKEL 73 (162)
T ss_dssp HCCEEEECCTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHT-TTCEEEEEESCCCHHHHHHHHHT
T ss_pred ceeEEEEecCcceECCceeecCCCceeeeecccHHHHHHHHHH-CCCEEEEEeCCCcHHHHHHHHHc
Confidence 478999999999997331 012235678899999986 58999999999999988888653
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0011 Score=63.81 Aligned_cols=48 Identities=21% Similarity=0.255 Sum_probs=39.3
Q ss_pred ceeEEecCCCcCCCCCC------CCCCCCHHHHHHHHHHHhcCCCeEEEEcCCCh
Q 004314 591 SRAILFDYDGTVMPQTS------INKAPSQAVISIINTLCNDARNTVFVVSGRGR 639 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~------~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~ 639 (761)
.|+++||+||||+.... ....+.+.+.++|++|.+ .+..++|+|+++.
T Consensus 1 ~k~v~~D~DGtL~~~~~~~~~~~~~~~~~~g~~~~l~~L~~-~g~~~~i~Tn~~~ 54 (179)
T 3l8h_A 1 MKLIILDRDGVVNQDSDAFVKSPDEWIALPGSLQAIARLTQ-ADWTVVLATNQSG 54 (179)
T ss_dssp CCEEEECSBTTTBCCCTTCCCSGGGCCBCTTHHHHHHHHHH-TTCEEEEEEECTT
T ss_pred CCEEEEcCCCccccCCCccCCCHHHceECcCHHHHHHHHHH-CCCEEEEEECCCc
Confidence 47999999999997531 133567899999999986 5899999999986
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.77 E-value=0.00085 Score=60.96 Aligned_cols=52 Identities=10% Similarity=0.103 Sum_probs=42.2
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhcc
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~ 647 (761)
.|+|++|+||||.. ...+.+.+.++|++|.+ .+..++|+|+++...++..+.
T Consensus 2 ~k~i~~D~DgtL~~----~~~~~~~~~~~l~~L~~-~G~~~~i~S~~~~~~~~~~l~ 53 (137)
T 2pr7_A 2 MRGLIVDYAGVLDG----TDEDQRRWRNLLAAAKK-NGVGTVILSNDPGGLGAAPIR 53 (137)
T ss_dssp CCEEEECSTTTTSS----CHHHHHHHHHHHHHHHH-TTCEEEEEECSCCGGGGHHHH
T ss_pred CcEEEEeccceecC----CCccCccHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHH
Confidence 47899999999943 33456789999999986 589999999999887666554
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=96.72 E-value=0.00031 Score=72.38 Aligned_cols=66 Identities=15% Similarity=0.101 Sum_probs=46.9
Q ss_pred eeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC---C--C--CceEEccCCeEE
Q 004314 592 RAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP---C--K--KLGIAAEHGYFM 662 (761)
Q Consensus 592 rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~---~--~--~l~liaehGa~i 662 (761)
|+|++|+||||+... . +.+++.+.|++|.+ .+..|+++|||+......++.. + + .-.+++.||+..
T Consensus 2 k~i~~D~DGtL~~~~---~-~~~~~~~~l~~l~~-~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~~i~~~~~~~~ 74 (263)
T 1zjj_A 2 VAIIFDMDGVLYRGN---R-AIPGVRELIEFLKE-RGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSIIITSGLATR 74 (263)
T ss_dssp EEEEEECBTTTEETT---E-ECTTHHHHHHHHHH-HTCCEEEEESCCSSCHHHHHHHHHTTTCCCCGGGEEEHHHHHH
T ss_pred eEEEEeCcCceEeCC---E-eCccHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEEecHHHHH
Confidence 789999999999732 2 23678999999986 5899999999997654444332 1 1 124667777654
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=96.71 E-value=0.00051 Score=71.22 Aligned_cols=59 Identities=20% Similarity=0.254 Sum_probs=44.6
Q ss_pred hccceeEEecCCCcCCCCCC----------------------CCCCCCHHHHHHHHHHHhcCCCeEEEEcCCC---hhhH
Q 004314 588 RSKSRAILFDYDGTVMPQTS----------------------INKAPSQAVISIINTLCNDARNTVFVVSGRG---RDCL 642 (761)
Q Consensus 588 ~s~~rlI~lDyDGTL~~~~~----------------------~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~---~~~L 642 (761)
..+.++|+||+||||++..+ ....+.+.+.++|+.|.+ .+..++|+|||+ +..+
T Consensus 56 ~~~~kavifDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~-~Gi~i~iaTnr~~~~~~~~ 134 (258)
T 2i33_A 56 TEKKPAIVLDLDETVLDNSPHQAMSVKTGKGYPYKWDDWINKAEAEALPGSIDFLKYTES-KGVDIYYISNRKTNQLDAT 134 (258)
T ss_dssp CSSEEEEEECSBTTTEECHHHHHHHHHHSCCTTTTHHHHHHHCCCEECTTHHHHHHHHHH-TTCEEEEEEEEEGGGHHHH
T ss_pred CCCCCEEEEeCcccCcCCHHHHHHHHhcccchHHHHHHHHHcCCCCcCccHHHHHHHHHH-CCCEEEEEcCCchhHHHHH
Confidence 34578999999999997420 014567899999999996 589999999999 4445
Q ss_pred Hhhcc
Q 004314 643 GKWFS 647 (761)
Q Consensus 643 ~~~f~ 647 (761)
.+.+.
T Consensus 135 ~~~L~ 139 (258)
T 2i33_A 135 IKNLE 139 (258)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55543
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0015 Score=66.40 Aligned_cols=58 Identities=16% Similarity=0.168 Sum_probs=45.5
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEc---CCChhhHHhhccC
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVS---GRGRDCLGKWFSP 648 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvS---GR~~~~L~~~f~~ 648 (761)
..|+|++|+||||++.......+.+...++++.|.+ .+..++++| ||+...+.+.+..
T Consensus 11 ~~k~i~fDlDGTLl~s~~~~~~~~~~~~~a~~~l~~-~G~~~~~~t~~~gr~~~~~~~~l~~ 71 (271)
T 2x4d_A 11 GVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKR-SRLKVRFCTNESAASRAELVGQLQR 71 (271)
T ss_dssp TCCEEEECCBTTTEECCTTTCEECTTHHHHHHHHHH-SSSEEEEECCCCSSCHHHHHHHHHH
T ss_pred cCCEEEEeCCCeEEecCCCCCccCcCHHHHHHHHHH-CCCcEEEEECCCCCCHHHHHHHHHH
Confidence 468999999999998321133466778888999875 689999999 9999888777754
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.60 E-value=0.0028 Score=62.62 Aligned_cols=57 Identities=9% Similarity=0.048 Sum_probs=44.4
Q ss_pred cceeEEecCCCcCCCCCCC----------CCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhcc
Q 004314 590 KSRAILFDYDGTVMPQTSI----------NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~----------~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~ 647 (761)
..|+|+||+||||+...-. ...+-+.+.++|+.|.+ .+..++|+||+....+.+..+
T Consensus 5 ~~kav~fDlDGTL~d~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~-~g~~~~i~T~~~~~~~~~~~~ 71 (196)
T 2oda_A 5 TFPALLFGLSGCLVDFGAQAATSDTPDDEHAQLTPGAQNALKALRD-QGMPCAWIDELPEALSTPLAA 71 (196)
T ss_dssp CCSCEEEETBTTTBCTTSTTTSCSSCCGGGGSBCTTHHHHHHHHHH-HTCCEEEECCSCHHHHHHHHT
T ss_pred cCCEEEEcCCCceEeccccccchhhcccccCCcCcCHHHHHHHHHH-CCCEEEEEcCChHHHHHHhcC
Confidence 5689999999999873310 12456889999999986 489999999999988766554
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=96.42 E-value=0.0027 Score=66.90 Aligned_cols=65 Identities=23% Similarity=0.355 Sum_probs=48.1
Q ss_pred CCHHHHHHHHHhccceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEc---CCChhhHHhhccC
Q 004314 577 LSIDAIVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVS---GRGRDCLGKWFSP 648 (761)
Q Consensus 577 l~~~~i~~~y~~s~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvS---GR~~~~L~~~f~~ 648 (761)
++.+.+.+-. .+.|+|++|+||||+... .+.+.+.++|++|.+ .+..|+++| ||+...+.+.+..
T Consensus 9 ~~~~~~~~~~--~~~k~i~~D~DGTL~~~~----~~~~~~~~~l~~l~~-~g~~~~~~Tn~~~~~~~~~~~~~~~ 76 (306)
T 2oyc_A 9 LRGAALRDVL--GRAQGVLFDCDGVLWNGE----RAVPGAPELLERLAR-AGKAALFVSNNSRRARPELALRFAR 76 (306)
T ss_dssp CCHHHHHHHH--HHCSEEEECSBTTTEETT----EECTTHHHHHHHHHH-TTCEEEEEECCCSSCHHHHHHHHHH
T ss_pred CCHHHHHHHH--hhCCEEEECCCCcEecCC----ccCcCHHHHHHHHHH-CCCeEEEEECCCCCCHHHHHHHHHh
Confidence 4555444322 247899999999999732 345679999999996 689999999 6888877777653
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=96.33 E-value=0.0027 Score=61.99 Aligned_cols=61 Identities=15% Similarity=0.099 Sum_probs=43.3
Q ss_pred HhccceeEEecCCCcCCCCCC----CCC---CCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 587 LRSKSRAILFDYDGTVMPQTS----INK---APSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 587 ~~s~~rlI~lDyDGTL~~~~~----~~~---~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
+....|+|++|+||||++... ... .....-...|++|.+ .+..++|+||++...++.++..
T Consensus 22 ~~~~ik~vifD~DGTL~~~~~~~~~~~~~~~~~~~~d~~~l~~L~~-~g~~v~ivT~~~~~~~~~~l~~ 89 (188)
T 2r8e_A 22 KAENIRLLILDVDGVLSDGLIYMGNNGEELKAFNVRDGYGIRCALT-SDIEVAIITGRKAKLVEDRCAT 89 (188)
T ss_dssp HHHTCSEEEECCCCCCBCSEEEEETTSCEEEEEEHHHHHHHHHHHT-TTCEEEEECSSCCHHHHHHHHH
T ss_pred HHhcCCEEEEeCCCCcCCCCEEecCCCcEEEEeecccHHHHHHHHH-CCCeEEEEeCCChHHHHHHHHH
Confidence 455789999999999997321 010 011222347888885 5899999999999988888764
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=96.31 E-value=0.0024 Score=63.67 Aligned_cols=53 Identities=15% Similarity=0.301 Sum_probs=40.6
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEc---CCChhhHHhhccC
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVS---GRGRDCLGKWFSP 648 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvS---GR~~~~L~~~f~~ 648 (761)
.|+|++|+||||++.. ...++. .+++++|.+ .+..++++| ||+...+.+.+..
T Consensus 3 ~k~i~fDlDGTLl~~~---~~~~~~-~~~~~~l~~-~g~~~~~~t~~~g~~~~~~~~~~~~ 58 (250)
T 2c4n_A 3 IKNVICDIDGVLMHDN---VAVPGA-AEFLHGIMD-KGLPLVLLTNYPSQTGQDLANRFAT 58 (250)
T ss_dssp CCEEEEECBTTTEETT---EECTTH-HHHHHHHHH-TTCCEEEEESCCSCCHHHHHHHHHH
T ss_pred ccEEEEcCcceEEeCC---EeCcCH-HHHHHHHHH-cCCcEEEEECCCCCCHHHHHHHHHH
Confidence 5899999999999843 223344 778888875 588898999 9988887777653
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=96.22 E-value=0.0043 Score=61.69 Aligned_cols=49 Identities=24% Similarity=0.253 Sum_probs=39.5
Q ss_pred cceeEEecCCCcCCCCCC-----CCCCCCHHHHHHHHHHHhcCCCeEEEEcCCCh
Q 004314 590 KSRAILFDYDGTVMPQTS-----INKAPSQAVISIINTLCNDARNTVFVVSGRGR 639 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~-----~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~ 639 (761)
+.|++++|+||||+.... ....+.+.+.++|++|.+ .+..++|+|+++.
T Consensus 24 ~~k~v~~D~DGTL~~~~~~~~~~~~~~~~pg~~e~L~~L~~-~G~~~~ivTn~~~ 77 (211)
T 2gmw_A 24 SVPAIFLDRDGTINVDHGYVHEIDNFEFIDGVIDAMRELKK-MGFALVVVTNQSG 77 (211)
T ss_dssp CBCEEEECSBTTTBCCCSSCCSGGGCCBCTTHHHHHHHHHH-TTCEEEEEEECTH
T ss_pred cCCEEEEcCCCCeECCCCcccCcccCcCCcCHHHHHHHHHH-CCCeEEEEECcCC
Confidence 468999999999997431 113567889999999996 5899999999993
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=96.21 E-value=0.00082 Score=63.78 Aligned_cols=59 Identities=15% Similarity=0.037 Sum_probs=41.1
Q ss_pred cceeEEecCCCcCCCCCC---CCCC----CCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC
Q 004314 590 KSRAILFDYDGTVMPQTS---INKA----PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~---~~~~----p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~ 649 (761)
..|+|+||+||||++... .... ....-...|+.|.+ .+..++|+||++...++..+..+
T Consensus 3 ~ik~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~g~~~~i~T~~~~~~~~~~~~~~ 68 (164)
T 3e8m_A 3 EIKLILTDIDGVWTDGGMFYDQTGNEWKKFNTSDSAGIFWAHN-KGIPVGILTGEKTEIVRRRAEKL 68 (164)
T ss_dssp CCCEEEECSTTTTSSSEEEECSSSCEEEEEEGGGHHHHHHHHH-TTCCEEEECSSCCHHHHHHHHHT
T ss_pred cceEEEEcCCCceEcCcEEEcCCCcEEEEecCChHHHHHHHHH-CCCEEEEEeCCChHHHHHHHHHc
Confidence 468999999999998431 0100 00111225888885 58999999999999988888754
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=96.19 E-value=0.0047 Score=62.49 Aligned_cols=53 Identities=17% Similarity=0.187 Sum_probs=38.8
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEc---CCChhhHHhhcc
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVS---GRGRDCLGKWFS 647 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvS---GR~~~~L~~~f~ 647 (761)
..|+|++|+||||++.. . ..++..++++.|.+ .+..++++| ||+...+.+.+.
T Consensus 6 ~ik~i~fDlDGTLld~~---~-~~~~~~~ai~~l~~-~G~~~~~~t~~~~~~~~~~~~~l~ 61 (259)
T 2ho4_A 6 ALKAVLVDLNGTLHIED---A-AVPGAQEALKRLRA-TSVMVRFVTNTTKETKKDLLERLK 61 (259)
T ss_dssp CCCEEEEESSSSSCC-------CCTTHHHHHHHHHT-SSCEEEEEECCSSCCHHHHHHHHH
T ss_pred hCCEEEEeCcCcEEeCC---E-eCcCHHHHHHHHHH-CCCeEEEEeCCCCcCHHHHHHHHH
Confidence 46899999999999832 2 23567888999886 588999999 566655555554
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=96.12 E-value=0.0034 Score=65.11 Aligned_cols=54 Identities=17% Similarity=0.268 Sum_probs=43.1
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcC---CChhhHHhhccC
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSG---RGRDCLGKWFSP 648 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSG---R~~~~L~~~f~~ 648 (761)
+.|+|++|+||||+... .+.+.+.+.|++|.+ .+..|+++|| |+...+.+.+..
T Consensus 13 ~~k~i~~D~DGtL~~~~----~~~~~~~~~l~~l~~-~g~~~~~~Tn~~~r~~~~~~~~l~~ 69 (284)
T 2hx1_A 13 KYKCIFFDAFGVLKTYN----GLLPGIENTFDYLKA-QGQDYYIVTNDASRSPEQLADSYHK 69 (284)
T ss_dssp GCSEEEECSBTTTEETT----EECTTHHHHHHHHHH-TTCEEEEEECCCSSCHHHHHHHHHH
T ss_pred cCCEEEEcCcCCcCcCC----eeChhHHHHHHHHHH-CCCEEEEEeCCCCcCHHHHHHHHHH
Confidence 47899999999999842 245688999999986 6899999995 777777766653
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=96.05 E-value=9.3e-05 Score=79.44 Aligned_cols=66 Identities=11% Similarity=-0.048 Sum_probs=46.2
Q ss_pred ccceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCCh---hhHH---hhc--cCCC-CceEEccCC
Q 004314 589 SKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGR---DCLG---KWF--SPCK-KLGIAAEHG 659 (761)
Q Consensus 589 s~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~---~~L~---~~f--~~~~-~l~liaehG 659 (761)
...|+|++|+||||++... . +.|.++.. .+..++++|||+. ..+. .++ ..+. +..+++.||
T Consensus 19 ~~~kli~fDlDGTLld~~~--------~-~~l~~~~~-~g~~~~~~tGR~~~~~~~~~~~~~~~~~~~l~~~~~~i~~nG 88 (332)
T 1y8a_A 19 FQGHMFFTDWEGPWILTDF--------A-LELCMAVF-NNARFFSNLSEYDDYLAYEVRREGYEAGYTLKLLTPFLAAAG 88 (332)
T ss_dssp -CCCEEEECSBTTTBCCCH--------H-HHHHHHHH-CCHHHHHHHHHHHHHHHHTTCCTTCCTTTHHHHHHHHHHHTT
T ss_pred CCceEEEEECcCCCcCccH--------H-HHHHHHHH-CCCEEEEEcCCCchhhhhhhhccCeechhhcCCcCeEEEcCC
Confidence 3568999999999998421 1 66777764 4678899999999 6665 555 3221 134678899
Q ss_pred eEEee
Q 004314 660 YFMRW 664 (761)
Q Consensus 660 a~ir~ 664 (761)
+.+..
T Consensus 89 a~i~~ 93 (332)
T 1y8a_A 89 VKNRD 93 (332)
T ss_dssp CCHHH
T ss_pred cEEEE
Confidence 98763
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=96.02 E-value=0.0019 Score=62.60 Aligned_cols=58 Identities=16% Similarity=0.188 Sum_probs=40.6
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHH-------HHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAV-------ISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~-------~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
+.|+|+||+||||++.........+.+ --.|+.|.+ .+..++|+||+....++..+..
T Consensus 11 ~~k~vifD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~l~~L~~-~g~~~~i~T~~~~~~~~~~~~~ 75 (176)
T 3mmz_A 11 DIDAVVLDFDGTQTDDRVLIDSDGREFVSVHRGDGLGIAALRK-SGLTMLILSTEQNPVVAARARK 75 (176)
T ss_dssp GCSEEEECCTTTTSCSCCEECTTCCEEEEEEHHHHHHHHHHHH-TTCEEEEEESSCCHHHHHHHHH
T ss_pred cCCEEEEeCCCCcCcCCEeecCCccHhHhcccccHHHHHHHHH-CCCeEEEEECcChHHHHHHHHH
Confidence 468999999999998331100000111 115888886 5899999999999998888864
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=95.93 E-value=0.0021 Score=63.60 Aligned_cols=60 Identities=13% Similarity=0.214 Sum_probs=42.5
Q ss_pred ccceeEEecCCCcCCCCCCCCCCCCHHHHH-------HHHHHHhcCCCeEEEEcCCChhhHHhhccCC
Q 004314 589 SKSRAILFDYDGTVMPQTSINKAPSQAVIS-------IINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (761)
Q Consensus 589 s~~rlI~lDyDGTL~~~~~~~~~p~~~~~~-------~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~ 649 (761)
.+.|+|+||+||||++.........+++.+ .|+.|.+ .+..++|+||+....++..+..+
T Consensus 23 ~~ik~vifD~DGtL~d~~~~~~~~~~~~~~~~~~d~~~l~~L~~-~G~~~~ivT~~~~~~~~~~l~~l 89 (195)
T 3n07_A 23 KQIKLLICDVDGVFSDGLIYMGNQGEELKTFHTRDGYGVKALMN-AGIEIAIITGRRSQIVENRMKAL 89 (195)
T ss_dssp HTCCEEEECSTTTTSCSCCEECTTSCEECCCCTTHHHHHHHHHH-TTCEEEEECSSCCHHHHHHHHHT
T ss_pred hCCCEEEEcCCCCcCCCcEEEccCchhhheeecccHHHHHHHHH-CCCEEEEEECcCHHHHHHHHHHc
Confidence 457899999999999732110001122233 3888886 58999999999999998888754
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=95.87 E-value=0.014 Score=63.00 Aligned_cols=104 Identities=12% Similarity=-0.021 Sum_probs=66.8
Q ss_pred cEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCC-C----CCccc
Q 004314 413 PVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEF-I----GCSPS 487 (761)
Q Consensus 413 pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~-~----G~~~~ 487 (761)
.|.+. +.++.. .+++.||++|..+ |. .+..|++++|. |+|+.-. . +.+..
T Consensus 282 ~v~~~-~~~~~~---~ll~~ad~~v~~~---G~-~t~~Ea~~~G~-----------------P~v~~p~~~~~q~~~a~~ 336 (402)
T 3ia7_A 282 NVEAH-QWIPFH---SVLAHARACLTHG---TT-GAVLEAFAAGV-----------------PLVLVPHFATEAAPSAER 336 (402)
T ss_dssp TEEEE-SCCCHH---HHHTTEEEEEECC---CH-HHHHHHHHTTC-----------------CEEECGGGCGGGHHHHHH
T ss_pred cEEEe-cCCCHH---HHHhhCCEEEECC---CH-HHHHHHHHhCC-----------------CEEEeCCCcccHHHHHHH
Confidence 35544 567765 8899999988765 33 46799999976 6664433 2 33333
Q ss_pred c---cCcEEECCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHh-hCCHHHHHHHHHHH
Q 004314 488 L---SGAIRVNPW--NIEATAEAMHEAIQMNEAEKQLRHEKHYRYVS-THDVAYWARSFFQD 543 (761)
Q Consensus 488 l---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~Wa~~~l~~ 543 (761)
+ ..|+.+++. +.+++++++.++|+++ +.+.++++..+.+. .....+-++.+.+-
T Consensus 337 ~~~~g~g~~~~~~~~~~~~l~~~~~~ll~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 396 (402)
T 3ia7_A 337 VIELGLGSVLRPDQLEPASIREAVERLAADS--AVRERVRRMQRDILSSGGPARAADEVEAY 396 (402)
T ss_dssp HHHTTSEEECCGGGCSHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHTSCHHHHHHHHHHHH
T ss_pred HHHcCCEEEccCCCCCHHHHHHHHHHHHcCH--HHHHHHHHHHHHHhhCChHHHHHHHHHHH
Confidence 3 237788876 8999999999999875 44455555444443 34445555444333
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=95.84 E-value=0.024 Score=62.69 Aligned_cols=146 Identities=11% Similarity=0.000 Sum_probs=85.5
Q ss_pred CeEEEeecCcccc-----CChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCC
Q 004314 336 KTVLLGVDDMDIF-----KGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPG 410 (761)
Q Consensus 336 ~~vil~VdRld~~-----KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~ 410 (761)
..|+++.|++... |.+...++|+.++ ++ .+|.+++. .+.+++ . .. .
T Consensus 268 ~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~-----~~----~~v~~~g~-----~~~~~l----~--------~~--~- 318 (441)
T 2yjn_A 268 RRVCLTLGISSRENSIGQVSIEELLGAVGDV-----DA----EIIATFDA-----QQLEGV----A--------NI--P- 318 (441)
T ss_dssp CEEEEEC----------CCSTTTTHHHHHTS-----SS----EEEECCCT-----TTTSSC----S--------SC--C-
T ss_pred CEEEEECCCCcccccChHHHHHHHHHHHHcC-----CC----EEEEEECC-----cchhhh----c--------cC--C-
Confidence 4688999998764 8888888887643 22 24433321 111111 0 01 0
Q ss_pred CccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCC----Ccc
Q 004314 411 YEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIG----CSP 486 (761)
Q Consensus 411 ~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~~ 486 (761)
..|. +.+.++.. .+|..||++|. +-| ..+..|+++||. |+|+..+.+ .++
T Consensus 319 -~~v~-~~~~~~~~---~ll~~ad~~V~---~~G-~~t~~Ea~~~G~-----------------P~i~~p~~~dQ~~na~ 372 (441)
T 2yjn_A 319 -DNVR-TVGFVPMH---ALLPTCAATVH---HGG-PGSWHTAAIHGV-----------------PQVILPDGWDTGVRAQ 372 (441)
T ss_dssp -SSEE-ECCSCCHH---HHGGGCSEEEE---CCC-HHHHHHHHHTTC-----------------CEEECCCSHHHHHHHH
T ss_pred -CCEE-EecCCCHH---HHHhhCCEEEE---CCC-HHHHHHHHHhCC-----------------CEEEeCCcccHHHHHH
Confidence 1355 44678864 45799999996 344 468899999976 777776643 233
Q ss_pred cc---cCcEEECCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHh-hCCHHHHHH
Q 004314 487 SL---SGAIRVNPW--NIEATAEAMHEAIQMNEAEKQLRHEKHYRYVS-THDVAYWAR 538 (761)
Q Consensus 487 ~l---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~Wa~ 538 (761)
.+ ..|+.+++. +.++++++|.++|+.+ +.+.++++..+.+. ......-++
T Consensus 373 ~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 428 (441)
T 2yjn_A 373 RTQEFGAGIALPVPELTPDQLRESVKRVLDDP--AHRAGAARMRDDMLAEPSPAEVVG 428 (441)
T ss_dssp HHHHHTSEEECCTTTCCHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHTSCCHHHHHH
T ss_pred HHHHcCCEEEcccccCCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHcCCCHHHHHH
Confidence 33 247888875 8899999999999864 44455555444443 344444333
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=95.82 E-value=0.003 Score=62.08 Aligned_cols=59 Identities=14% Similarity=0.141 Sum_probs=41.9
Q ss_pred ccceeEEecCCCcCCCCCCCCCCCCHHHHH-------HHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 589 SKSRAILFDYDGTVMPQTSINKAPSQAVIS-------IINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 589 s~~rlI~lDyDGTL~~~~~~~~~p~~~~~~-------~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
.+.|+|+||+||||++.........+++.+ .|+.|.+ .+..++|+||++...++..+..
T Consensus 17 ~~ik~vifD~DGtL~~~~~~~~~~~~~~~~~~~~d~~~l~~L~~-~g~~~~ivTn~~~~~~~~~l~~ 82 (191)
T 3n1u_A 17 KKIKCLICDVDGVLSDGLLHIDNHGNELKSFHVQDGMGLKLLMA-AGIQVAIITTAQNAVVDHRMEQ 82 (191)
T ss_dssp HTCSEEEECSTTTTBCSCCEECTTCCEECCBCHHHHHHHHHHHH-TTCEEEEECSCCSHHHHHHHHH
T ss_pred hcCCEEEEeCCCCCCCCceeecCCchhhhhccccChHHHHHHHH-CCCeEEEEeCcChHHHHHHHHH
Confidence 457899999999999733111111123333 3888885 5899999999999988887764
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=95.70 E-value=0.028 Score=61.18 Aligned_cols=102 Identities=17% Similarity=-0.054 Sum_probs=65.3
Q ss_pred cEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCC----Ccccc
Q 004314 413 PVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIG----CSPSL 488 (761)
Q Consensus 413 pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~~~l 488 (761)
.|.+. +.++.. .++..||++|..+ |. .+..|++++|. |+|+--+.+ .+..+
T Consensus 298 ~v~~~-~~~~~~---~ll~~ad~~v~~~---G~-~t~~Ea~~~G~-----------------P~v~~p~~~~q~~~a~~l 352 (415)
T 3rsc_A 298 NVEAH-RWVPHV---KVLEQATVCVTHG---GM-GTLMEALYWGR-----------------PLVVVPQSFDVQPMARRV 352 (415)
T ss_dssp TEEEE-SCCCHH---HHHHHEEEEEESC---CH-HHHHHHHHTTC-----------------CEEECCCSGGGHHHHHHH
T ss_pred cEEEE-ecCCHH---HHHhhCCEEEECC---cH-HHHHHHHHhCC-----------------CEEEeCCcchHHHHHHHH
Confidence 46554 577765 7888999988764 33 46799999986 666633322 33333
Q ss_pred ---cCcEEECCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHh-hCCHHHHHHHHH
Q 004314 489 ---SGAIRVNPW--NIEATAEAMHEAIQMNEAEKQLRHEKHYRYVS-THDVAYWARSFF 541 (761)
Q Consensus 489 ---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~Wa~~~l 541 (761)
..|+.+++. +.++++++|.++|+.+ +.+.++++..+.+. ...+.+-++.+.
T Consensus 353 ~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~ 409 (415)
T 3rsc_A 353 DQLGLGAVLPGEKADGDTLLAAVGAVAADP--ALLARVEAMRGHVRRAGGAARAADAVE 409 (415)
T ss_dssp HHHTCEEECCGGGCCHHHHHHHHHHHHTCH--HHHHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred HHcCCEEEcccCCCCHHHHHHHHHHHHcCH--HHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 236778775 8999999999999874 44555555444443 344455444443
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=95.69 E-value=0.0029 Score=63.25 Aligned_cols=62 Identities=23% Similarity=0.332 Sum_probs=43.5
Q ss_pred CHHHHHHHHHhccceeEEecCCCcCCCCCCC-------------------------------CCCCCHHHHHHHHHHHhc
Q 004314 578 SIDAIVSAYLRSKSRAILFDYDGTVMPQTSI-------------------------------NKAPSQAVISIINTLCND 626 (761)
Q Consensus 578 ~~~~i~~~y~~s~~rlI~lDyDGTL~~~~~~-------------------------------~~~p~~~~~~~L~~L~~d 626 (761)
+.+++.........|+|+||+||||++..+. ...+.+.+.++|+.|.+
T Consensus 24 ~~~~i~~~~~~~~~kaviFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~L~~- 102 (211)
T 2b82_A 24 SVAQIENSLAGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVR- 102 (211)
T ss_dssp CHHHHHHHTTTCCCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHH-
T ss_pred eHhhHhhhcccCCCCEEEEcCCCCCCcCcHHHHHHHHHhhHHHHHHhhhHHHHHHHHHhHHhcCCCcHHHHHHHHHHHH-
Confidence 3555554333335789999999999973210 01234578899999986
Q ss_pred CCCeEEEEcCCChh
Q 004314 627 ARNTVFVVSGRGRD 640 (761)
Q Consensus 627 ~~n~V~IvSGR~~~ 640 (761)
.+..++|+||++..
T Consensus 103 ~G~~l~ivTn~~~~ 116 (211)
T 2b82_A 103 RGDAIFFVTGRSPT 116 (211)
T ss_dssp HTCEEEEEECSCCC
T ss_pred CCCEEEEEcCCcHH
Confidence 48999999999855
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=95.64 E-value=0.019 Score=62.48 Aligned_cols=148 Identities=11% Similarity=0.013 Sum_probs=85.3
Q ss_pred CCeEEEeecCcccc-CChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCcc
Q 004314 335 GKTVLLGVDDMDIF-KGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEP 413 (761)
Q Consensus 335 ~~~vil~VdRld~~-KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~p 413 (761)
.+.+++++|++... |+...+..+++.|.+ . +++ ++.++++. +.+.+ . . . ...
T Consensus 232 ~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~-~-~~~----~v~~~g~~-----~~~~l----~----~----~----~~~ 284 (398)
T 3oti_A 232 RPEVAITMGTIELQAFGIGAVEPIIAAAGE-V-DAD----FVLALGDL-----DISPL----G----T----L----PRN 284 (398)
T ss_dssp SCEEEECCTTTHHHHHCGGGHHHHHHHHHT-S-SSE----EEEECTTS-----CCGGG----C----S----C----CTT
T ss_pred CCEEEEEcCCCccccCcHHHHHHHHHHHHc-C-CCE----EEEEECCc-----Chhhh----c----c----C----CCc
Confidence 45788889999665 355555555554432 2 233 55555332 11111 1 0 0 123
Q ss_pred EEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEE----cCCCCCc--cc
Q 004314 414 VVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVV----SEFIGCS--PS 487 (761)
Q Consensus 414 V~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~----Se~~G~~--~~ 487 (761)
|.+. +.++.. .++..||++|. .|-..+..|+|+||. |+|+ .+-.+.+ +.
T Consensus 285 v~~~-~~~~~~---~ll~~ad~~v~----~~G~~t~~Eal~~G~-----------------P~v~~p~~~dq~~~a~~~~ 339 (398)
T 3oti_A 285 VRAV-GWTPLH---TLLRTCTAVVH----HGGGGTVMTAIDAGI-----------------PQLLAPDPRDQFQHTAREA 339 (398)
T ss_dssp EEEE-SSCCHH---HHHTTCSEEEE----CCCHHHHHHHHHHTC-----------------CEEECCCTTCCSSCTTHHH
T ss_pred EEEE-ccCCHH---HHHhhCCEEEE----CCCHHHHHHHHHhCC-----------------CEEEcCCCchhHHHHHHHH
Confidence 6654 566644 56778999984 344457899999986 6776 5556666 66
Q ss_pred cc---CcEEECCC--CHHHHHHHHHHHHcCCHHHHHHHHHH-HhhHHhhCCHHHHHHHH
Q 004314 488 LS---GAIRVNPW--NIEATAEAMHEAIQMNEAEKQLRHEK-HYRYVSTHDVAYWARSF 540 (761)
Q Consensus 488 l~---~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~-~~~~v~~~~~~~Wa~~~ 540 (761)
+. .|+.+++. +.++++ ++|+.+ +.+.++++ ..+......+...++.+
T Consensus 340 ~~~~g~g~~~~~~~~~~~~l~----~ll~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l 392 (398)
T 3oti_A 340 VSRRGIGLVSTSDKVDADLLR----RLIGDE--SLRTAAREVREEMVALPTPAETVRRI 392 (398)
T ss_dssp HHHHTSEEECCGGGCCHHHHH----HHHHCH--HHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HHHCCCEEeeCCCCCCHHHHH----HHHcCH--HHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 62 47888876 455555 777753 34444444 44445556666555543
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=95.57 E-value=0.0084 Score=61.22 Aligned_cols=52 Identities=17% Similarity=0.192 Sum_probs=40.7
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhc
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWF 646 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f 646 (761)
..|+|+||+||||++.. . +-+++.+.|+.|.+ .+..++++|||+......++
T Consensus 4 ~~k~v~fDlDGTL~~~~---~-~~~~~~~~l~~l~~-~g~~~~~~t~~~~~~~~~~~ 55 (264)
T 1yv9_A 4 DYQGYLIDLDGTIYLGK---E-PIPAGKRFVERLQE-KDLPFLFVTNNTTKSPETVA 55 (264)
T ss_dssp SCCEEEECCBTTTEETT---E-ECHHHHHHHHHHHH-TTCCEEEEECCCSSCHHHHH
T ss_pred cCCEEEEeCCCeEEeCC---E-ECcCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHH
Confidence 36899999999999832 2 23688899999986 58899999999876655544
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=95.51 E-value=0.0092 Score=57.53 Aligned_cols=58 Identities=16% Similarity=0.130 Sum_probs=38.7
Q ss_pred HhccceeEEecCCCcCCCCCCC---CCC----CCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhcc
Q 004314 587 LRSKSRAILFDYDGTVMPQTSI---NKA----PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (761)
Q Consensus 587 ~~s~~rlI~lDyDGTL~~~~~~---~~~----p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~ 647 (761)
+..+.|+|++|+||||++..-. ... -+-+-...|+.|.+ .+..++|+||+ ...+..+.
T Consensus 5 ~~~~ikliv~D~DGtL~d~~~~~~~~g~~~~~f~~~D~~~L~~Lk~-~Gi~~~I~Tg~--~~~~~~l~ 69 (168)
T 3ewi_A 5 KLKEIKLLVCNIDGCLTNGHIYVSGDQKEIISYDVKDAIGISLLKK-SGIEVRLISER--ACSKQTLS 69 (168)
T ss_dssp --CCCCEEEEECCCCCSCSCCBCCSSCCCEEEEEHHHHHHHHHHHH-TTCEEEEECSS--CCCHHHHH
T ss_pred hHhcCcEEEEeCccceECCcEEEcCCCCEEEEEecCcHHHHHHHHH-CCCEEEEEeCc--HHHHHHHH
Confidence 4456899999999999984311 100 01112246888886 58999999999 66666665
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=95.50 E-value=0.013 Score=56.87 Aligned_cols=57 Identities=5% Similarity=0.085 Sum_probs=44.4
Q ss_pred ceeEEecCCCcCCCCCC-----------CCCCCCHHHHHHHHHHHhcCCCeEEEEcCCCh---hhHHhhccC
Q 004314 591 SRAILFDYDGTVMPQTS-----------INKAPSQAVISIINTLCNDARNTVFVVSGRGR---DCLGKWFSP 648 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~-----------~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~---~~L~~~f~~ 648 (761)
.++|++|+||||+.... ....+.+.+.++|++|.+ .+..++|+|+++. ..+...+..
T Consensus 3 ik~vifD~DgtL~~~~~~~y~~~~~~~~~~~~~~~g~~~~L~~L~~-~g~~~~i~Tn~~~~~~~~~~~~l~~ 73 (189)
T 3ib6_A 3 LTHVIWDMGETLNTVPNTRYDHHPLDTYPEVVLRKNAKETLEKVKQ-LGFKQAILSNTATSDTEVIKRVLTN 73 (189)
T ss_dssp CCEEEECTBTTTBCCCTTSSCSSCGGGCTTCCBCTTHHHHHHHHHH-TTCEEEEEECCSSCCHHHHHHHHHH
T ss_pred ceEEEEcCCCceeeccchhhhhHHHhccCCceeCcCHHHHHHHHHH-CCCEEEEEECCCccchHHHHHHHHh
Confidence 68999999999976321 123577899999999996 5899999999886 666666653
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=95.29 E-value=0.0097 Score=59.25 Aligned_cols=49 Identities=24% Similarity=0.281 Sum_probs=40.0
Q ss_pred cceeEEecCCCcCCCCCC-----CCCCCCHHHHHHHHHHHhcCCCeEEEEcCCCh
Q 004314 590 KSRAILFDYDGTVMPQTS-----INKAPSQAVISIINTLCNDARNTVFVVSGRGR 639 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~-----~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~ 639 (761)
..+++++|+||||+.... ....+.+.+.++|++|.+ .+..++|+|+++.
T Consensus 30 ~~k~i~~D~DGtl~~~~~y~~~~~~~~~~~g~~e~L~~L~~-~G~~~~i~Tn~~~ 83 (218)
T 2o2x_A 30 HLPALFLDRDGTINVDTDYPSDPAEIVLRPQMLPAIATANR-AGIPVVVVTNQSG 83 (218)
T ss_dssp SCCCEEECSBTTTBCCCSCTTCGGGCCBCGGGHHHHHHHHH-HTCCEEEEEECHH
T ss_pred cCCEEEEeCCCCcCCCCcccCCcccCeECcCHHHHHHHHHH-CCCEEEEEcCcCC
Confidence 468999999999997421 124567899999999986 4899999999998
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=95.13 E-value=0.014 Score=56.74 Aligned_cols=36 Identities=8% Similarity=0.057 Sum_probs=26.9
Q ss_pred CCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhcc
Q 004314 612 PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (761)
Q Consensus 612 p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~ 647 (761)
+.+.+.++|++|.+.++..++|+|+++...++.++.
T Consensus 74 ~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~ 109 (193)
T 2i7d_A 74 PIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGE 109 (193)
T ss_dssp BCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHH
T ss_pred cCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHH
Confidence 457889999999852278899999998766555443
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=94.99 E-value=0.017 Score=55.72 Aligned_cols=49 Identities=20% Similarity=0.299 Sum_probs=38.4
Q ss_pred hccceeEEecCCCcCCCCCC--------CCCCCCHHHHHHHHHHHhcCCCeEEEEcCC
Q 004314 588 RSKSRAILFDYDGTVMPQTS--------INKAPSQAVISIINTLCNDARNTVFVVSGR 637 (761)
Q Consensus 588 ~s~~rlI~lDyDGTL~~~~~--------~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR 637 (761)
.+..|++++|.||||....+ ....+.+.+.++|++|.+ .+..++|+|+.
T Consensus 11 ~~~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~-~G~~l~i~Tn~ 67 (176)
T 2fpr_A 11 GSSQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKLQK-AGYKLVMITNQ 67 (176)
T ss_dssp --CCEEEEECSBTTTBCCC--CCCCCSGGGCCBCTTHHHHHHHHHH-TTEEEEEEEEC
T ss_pred CCcCcEEEEeCCCCeEcCCCCCcCcCCHHHCcCCccHHHHHHHHHH-CCCEEEEEECC
Confidence 45789999999999986531 134567899999999996 58899999998
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=94.96 E-value=0.0097 Score=58.15 Aligned_cols=59 Identities=17% Similarity=0.157 Sum_probs=41.3
Q ss_pred ccceeEEecCCCcCCCCCCC---CCC----CCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 589 SKSRAILFDYDGTVMPQTSI---NKA----PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 589 s~~rlI~lDyDGTL~~~~~~---~~~----p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
.+.|+|+||+||||++.... ... ....--..|+.|.+ .+..++|+||+....++..+..
T Consensus 17 ~~ik~vifD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~l~~L~~-~g~~~~i~T~~~~~~~~~~~~~ 82 (189)
T 3mn1_A 17 KAIKLAVFDVDGVLTDGRLYFMEDGSEIKTFNTLDGQGIKMLIA-SGVTTAIISGRKTAIVERRAKS 82 (189)
T ss_dssp HTCCEEEECSTTTTSCSEEEEETTSCEEEEEEHHHHHHHHHHHH-TTCEEEEECSSCCHHHHHHHHH
T ss_pred HhCCEEEEcCCCCcCCccEeeccCCcEeeeeccccHHHHHHHHH-CCCEEEEEECcChHHHHHHHHH
Confidence 35789999999999974310 000 01111127888886 5899999999999988888764
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=94.14 E-value=0.028 Score=56.06 Aligned_cols=34 Identities=15% Similarity=0.145 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 614 QAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 614 ~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
+.+.++|+.|.+ .+..++|+|+.+...+...+..
T Consensus 108 ~~~~~~l~~l~~-~g~~~~i~s~~~~~~~~~~l~~ 141 (240)
T 2no4_A 108 PDAAETLEKLKS-AGYIVAILSNGNDEMLQAALKA 141 (240)
T ss_dssp TTHHHHHHHHHH-TTCEEEEEESSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHh
Confidence 567788888886 5899999999998887777653
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=93.65 E-value=0.093 Score=51.86 Aligned_cols=36 Identities=6% Similarity=0.018 Sum_probs=29.8
Q ss_pred CHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC
Q 004314 613 SQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (761)
Q Consensus 613 ~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~ 649 (761)
.+.+.++|+.|.+ .+..++|+||.....++.++..+
T Consensus 94 ~~g~~~~l~~l~~-~g~~~~ivS~~~~~~~~~~~~~~ 129 (232)
T 3fvv_A 94 TVQAVDVVRGHLA-AGDLCALVTATNSFVTAPIARAF 129 (232)
T ss_dssp CHHHHHHHHHHHH-TTCEEEEEESSCHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHc
Confidence 5778889999986 58999999999998888777643
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=93.64 E-value=0.014 Score=58.25 Aligned_cols=59 Identities=19% Similarity=0.146 Sum_probs=41.1
Q ss_pred ccceeEEecCCCcCCCCCC----CCC---CCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 589 SKSRAILFDYDGTVMPQTS----INK---APSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 589 s~~rlI~lDyDGTL~~~~~----~~~---~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
...|+|+||+||||++... ... .....---.|+.|.+ .+..++|+||+....++..+..
T Consensus 47 ~~ik~viFDlDGTL~Ds~~~~~~~~~~~~~~~~~d~~~L~~L~~-~G~~l~I~T~~~~~~~~~~l~~ 112 (211)
T 3ij5_A 47 ANIRLLICDVDGVMSDGLIYMGNQGEELKAFNVRDGYGIRCLIT-SDIDVAIITGRRAKLLEDRANT 112 (211)
T ss_dssp TTCSEEEECCTTTTSSSEEEEETTSCEEEEEEHHHHHHHHHHHH-TTCEEEEECSSCCHHHHHHHHH
T ss_pred hCCCEEEEeCCCCEECCHHHHhhhhHHHHHhccchHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHH
Confidence 3578999999999997431 000 000111117888886 5899999999999988888764
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=93.35 E-value=0.27 Score=53.67 Aligned_cols=136 Identities=10% Similarity=-0.008 Sum_probs=81.7
Q ss_pred CCeEEEeecCc-cccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCcc
Q 004314 335 GKTVLLGVDDM-DIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEP 413 (761)
Q Consensus 335 ~~~vil~VdRl-d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~p 413 (761)
...++++.|++ +..|.+...++|++++ + .+ ++.+.++. . .+ . ..+ -..
T Consensus 238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~----~-~~----~v~~~g~~--~-~~----------~-~~~--------~~~ 286 (415)
T 1iir_A 238 PPPVYLGFGSLGAPADAVRVAIDAIRAH----G-RR----VILSRGWA--D-LV----------L-PDD--------GAD 286 (415)
T ss_dssp SCCEEEECC---CCHHHHHHHHHHHHHT----T-CC----EEECTTCT--T-CC----------C-SSC--------GGG
T ss_pred CCeEEEeCCCCCCcHHHHHHHHHHHHHC----C-Ce----EEEEeCCC--c-cc----------c-cCC--------CCC
Confidence 35788999999 6777777788887653 2 22 33332211 0 00 0 000 013
Q ss_pred EEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCC----Ccccc-
Q 004314 414 VVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIG----CSPSL- 488 (761)
Q Consensus 414 V~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~~~l- 488 (761)
|. +.+.+++.++ +..||++|.. -|. .+..|++++|. |+|+-.+.+ .+..+
T Consensus 287 v~-~~~~~~~~~~---l~~~d~~v~~---~G~-~t~~Ea~~~G~-----------------P~i~~p~~~dQ~~na~~l~ 341 (415)
T 1iir_A 287 CF-AIGEVNHQVL---FGRVAAVIHH---GGA-GTTHVAARAGA-----------------PQILLPQMADQPYYAGRVA 341 (415)
T ss_dssp EE-ECSSCCHHHH---GGGSSEEEEC---CCH-HHHHHHHHHTC-----------------CEEECCCSTTHHHHHHHHH
T ss_pred EE-EeCcCChHHH---HhhCCEEEeC---CCh-hHHHHHHHcCC-----------------CEEECCCCCccHHHHHHHH
Confidence 54 4567887654 6999999964 354 68999999986 677665544 22333
Q ss_pred --cCcEEECCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHh
Q 004314 489 --SGAIRVNPW--NIEATAEAMHEAIQMNEAEKQLRHEKHYRYVS 529 (761)
Q Consensus 489 --~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~ 529 (761)
..|+.+++. +.++++++|.++ +.+ +.++++++..+.+.
T Consensus 342 ~~g~g~~~~~~~~~~~~l~~~i~~l-~~~--~~~~~~~~~~~~~~ 383 (415)
T 1iir_A 342 ELGVGVAHDGPIPTFDSLSAALATA-LTP--ETHARATAVAGTIR 383 (415)
T ss_dssp HHTSEEECSSSSCCHHHHHHHHHHH-TSH--HHHHHHHHHHHHSC
T ss_pred HCCCcccCCcCCCCHHHHHHHHHHH-cCH--HHHHHHHHHHHHHh
Confidence 237777763 789999999998 643 44445555444443
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=93.26 E-value=0.035 Score=57.26 Aligned_cols=58 Identities=22% Similarity=0.283 Sum_probs=43.3
Q ss_pred cceeEEecCCCcCCCCCC-----------------------CCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChh----hH
Q 004314 590 KSRAILFDYDGTVMPQTS-----------------------INKAPSQAVISIINTLCNDARNTVFVVSGRGRD----CL 642 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~-----------------------~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~----~L 642 (761)
++.+|+||+||||+...+ ....+-+.++++|+.|.+ .+..|+|+|||+.. ..
T Consensus 57 ~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~g~~~~~pg~~ell~~L~~-~G~~i~ivTgR~~~~~r~~T 135 (260)
T 3pct_A 57 KKKAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVDARQSAAIPGAVEFSNYVNA-NGGTMFFVSNRRDDVEKAGT 135 (260)
T ss_dssp -CEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHTTCCEECTTHHHHHHHHHH-TTCEEEEEEEEETTTSHHHH
T ss_pred CCCEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHHHcCCCCCCccHHHHHHHHHH-CCCeEEEEeCCCccccHHHH
Confidence 446999999999997431 123455789999999996 59999999999754 66
Q ss_pred HhhccC
Q 004314 643 GKWFSP 648 (761)
Q Consensus 643 ~~~f~~ 648 (761)
.+++..
T Consensus 136 ~~~L~~ 141 (260)
T 3pct_A 136 VDDMKR 141 (260)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666653
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=93.19 E-value=0.087 Score=51.56 Aligned_cols=35 Identities=17% Similarity=0.183 Sum_probs=27.9
Q ss_pred CCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhcc
Q 004314 612 PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (761)
Q Consensus 612 p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~ 647 (761)
+.+.+.++|+.|.+ .+..++|+|+.+...+...+.
T Consensus 97 ~~~~~~~~l~~l~~-~g~~~~i~s~~~~~~~~~~l~ 131 (230)
T 3um9_A 97 PFADVPQALQQLRA-AGLKTAILSNGSRHSIRQVVG 131 (230)
T ss_dssp BCTTHHHHHHHHHH-TTCEEEEEESSCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHh-CCCeEEEEeCCCHHHHHHHHH
Confidence 34667788899886 578999999999887777664
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=92.99 E-value=0.037 Score=57.18 Aligned_cols=59 Identities=15% Similarity=0.199 Sum_probs=44.3
Q ss_pred ccceeEEecCCCcCCCCCC-----------------------CCCCCCHHHHHHHHHHHhcCCCeEEEEcCCCh----hh
Q 004314 589 SKSRAILFDYDGTVMPQTS-----------------------INKAPSQAVISIINTLCNDARNTVFVVSGRGR----DC 641 (761)
Q Consensus 589 s~~rlI~lDyDGTL~~~~~-----------------------~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~----~~ 641 (761)
.++.+|+||+||||+...+ ....+-+.++++|+.|.+ .+..|+|+|||+. +.
T Consensus 56 ~~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~~~~~~~pG~~ell~~L~~-~G~ki~ivTgR~~~~~r~~ 134 (262)
T 3ocu_A 56 GKKKAVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNS-HNGKVFYVTNRKDSTEKSG 134 (262)
T ss_dssp TCEEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHHTCCEECTTHHHHHHHHHH-TTEEEEEEEEEETTTTHHH
T ss_pred CCCeEEEEECCCcCCCCchhhhhhccccccCCHHHHHHHHHcCCCCCCccHHHHHHHHHH-CCCeEEEEeCCCccchHHH
Confidence 4567999999999997431 022345688899999986 5899999999975 46
Q ss_pred HHhhccC
Q 004314 642 LGKWFSP 648 (761)
Q Consensus 642 L~~~f~~ 648 (761)
..+++..
T Consensus 135 T~~~L~~ 141 (262)
T 3ocu_A 135 TIDDMKR 141 (262)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666653
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=92.84 E-value=0.18 Score=51.55 Aligned_cols=35 Identities=6% Similarity=0.177 Sum_probs=28.7
Q ss_pred CCHHHHHHHHHHHhcCCC--eEEEEcCCChhhHHhhcc
Q 004314 612 PSQAVISIINTLCNDARN--TVFVVSGRGRDCLGKWFS 647 (761)
Q Consensus 612 p~~~~~~~L~~L~~d~~n--~V~IvSGR~~~~L~~~f~ 647 (761)
+.+.+.++|+.|.+ .+. .++|+|+.....+...+.
T Consensus 143 ~~p~~~~~L~~L~~-~g~~~~l~i~Tn~~~~~~~~~l~ 179 (282)
T 3nuq_A 143 PDIPLRNMLLRLRQ-SGKIDKLWLFTNAYKNHAIRCLR 179 (282)
T ss_dssp CCHHHHHHHHHHHH-SSSCSEEEEECSSCHHHHHHHHH
T ss_pred cChhHHHHHHHHHh-CCCCceEEEEECCChHHHHHHHH
Confidence 46788899999986 578 999999999887776654
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=92.70 E-value=0.049 Score=52.86 Aligned_cols=36 Identities=8% Similarity=0.220 Sum_probs=28.8
Q ss_pred CCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 612 PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 612 p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
+.+.+.++|+.|.+ .+..++|+|+.....++..+..
T Consensus 71 ~~~~~~~~l~~l~~-~g~~~~i~s~~~~~~~~~~l~~ 106 (205)
T 3m9l_A 71 PAPGAVELVRELAG-RGYRLGILTRNARELAHVTLEA 106 (205)
T ss_dssp ECTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHH
T ss_pred CCccHHHHHHHHHh-cCCeEEEEeCCchHHHHHHHHH
Confidence 34567788999886 5899999999999888777654
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=92.66 E-value=0.034 Score=54.74 Aligned_cols=55 Identities=16% Similarity=0.250 Sum_probs=34.6
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHH-HhcCCCeEEEEcCCChhh-HHhhccC
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTL-CNDARNTVFVVSGRGRDC-LGKWFSP 648 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L-~~d~~n~V~IvSGR~~~~-L~~~f~~ 648 (761)
.|+|+||+||||++.. ....+.+.++++++ -......+...+||+... +..++..
T Consensus 4 ~k~iifDlDGTL~d~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~ 60 (234)
T 2hcf_A 4 RTLVLFDIDGTLLKVE---SMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSN 60 (234)
T ss_dssp CEEEEECCBTTTEEEC---THHHHHHHHHHHHHHSCCCCC---CCTTCCHHHHHHHHHHT
T ss_pred ceEEEEcCCCCcccCc---cchHHHHHHHHHHHhCCCCccchhhhcCCChHHHHHHHHHH
Confidence 5899999999999842 22335566677764 222223567889999876 5666643
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=92.63 E-value=0.059 Score=59.52 Aligned_cols=49 Identities=14% Similarity=0.267 Sum_probs=38.2
Q ss_pred ccceeEEecCCCcCCCCCCC--------C-CCCCHHHHHHHHHHHhcCCCeEEEEcCCC
Q 004314 589 SKSRAILFDYDGTVMPQTSI--------N-KAPSQAVISIINTLCNDARNTVFVVSGRG 638 (761)
Q Consensus 589 s~~rlI~lDyDGTL~~~~~~--------~-~~p~~~~~~~L~~L~~d~~n~V~IvSGR~ 638 (761)
...|+++||+||||+...+. . ..+.+.+.++|+.|.+ .+..++|+|+++
T Consensus 56 ~~~k~v~fD~DGTL~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~-~G~~l~IvTN~~ 113 (416)
T 3zvl_A 56 PQGKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQELAA-EGYKLVIFTNQM 113 (416)
T ss_dssp CCSSEEEECSBTTTEECSSCSSSCSSTTCCEESCTTHHHHHHHHHH-TTCEEEEEEECH
T ss_pred CCCeEEEEeCCCCccccCCCccCCCCHHHhhhhcccHHHHHHHHHH-CCCeEEEEeCCc
Confidence 35789999999999864311 1 1256889999999996 589999999966
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=92.51 E-value=0.51 Score=51.37 Aligned_cols=96 Identities=15% Similarity=-0.007 Sum_probs=63.4
Q ss_pred cEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCC----Ccccc
Q 004314 413 PVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIG----CSPSL 488 (761)
Q Consensus 413 pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~~~l 488 (761)
.|.+. +.+++. .+|..||++|.. -|. .+..|++++|. |+|+.-+.+ .+..+
T Consensus 306 ~v~~~-~~~~~~---~~l~~~d~~v~~---~G~-~t~~Ea~~~G~-----------------P~i~~p~~~dQ~~na~~l 360 (424)
T 2iya_A 306 NVEVH-QWVPQL---DILTKASAFITH---AGM-GSTMEALSNAV-----------------PMVAVPQIAEQTMNAERI 360 (424)
T ss_dssp TEEEE-SSCCHH---HHHTTCSEEEEC---CCH-HHHHHHHHTTC-----------------CEEECCCSHHHHHHHHHH
T ss_pred CeEEe-cCCCHH---HHHhhCCEEEEC---Cch-hHHHHHHHcCC-----------------CEEEecCccchHHHHHHH
Confidence 35544 577765 689999987753 343 58999999976 677765532 12223
Q ss_pred ---cCcEEECCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHH
Q 004314 489 ---SGAIRVNPW--NIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAY 535 (761)
Q Consensus 489 ---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~ 535 (761)
..|+.+++. +.++++++|.++|+.+ +.+.++++..+.+...+...
T Consensus 361 ~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~~~~~~~~ 410 (424)
T 2iya_A 361 VELGLGRHIPRDQVTAEKLREAVLAVASDP--GVAERLAAVRQEIREAGGAR 410 (424)
T ss_dssp HHTTSEEECCGGGCCHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHTSCHHH
T ss_pred HHCCCEEEcCcCCCCHHHHHHHHHHHHcCH--HHHHHHHHHHHHHHhcCcHH
Confidence 236777765 8899999999999864 45556666555555444333
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=92.05 E-value=0.073 Score=51.77 Aligned_cols=36 Identities=11% Similarity=0.090 Sum_probs=28.7
Q ss_pred CCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 612 PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 612 p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
+.+.+.++|+.|.+ .+..++|+|+.....++.++..
T Consensus 76 ~~~~~~~~l~~l~~-~g~~~~i~S~~~~~~~~~~l~~ 111 (217)
T 3m1y_A 76 LFEGALELVSALKE-KNYKVVCFSGGFDLATNHYRDL 111 (217)
T ss_dssp BCBTHHHHHHHHHT-TTEEEEEEEEEEHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHH-CCCEEEEEcCCchhHHHHHHHH
Confidence 45678899999985 5889999999988877766653
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=92.05 E-value=0.1 Score=56.36 Aligned_cols=44 Identities=23% Similarity=0.375 Sum_probs=36.1
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCC
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRG 638 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~ 638 (761)
+.+.+++|+||||... ..+-+...+.|+.|.+ .+..++++|+++
T Consensus 12 ~~~~~l~D~DGvl~~g----~~~~p~a~~~l~~l~~-~g~~~~~vTNn~ 55 (352)
T 3kc2_A 12 KKIAFAFDIDGVLFRG----KKPIAGASDALKLLNR-NKIPYILLTNGG 55 (352)
T ss_dssp CCEEEEECCBTTTEET----TEECTTHHHHHHHHHH-TTCCEEEECSCC
T ss_pred cCCEEEEECCCeeEcC----CeeCcCHHHHHHHHHH-CCCEEEEEeCCC
Confidence 6889999999999973 2345688899999986 588999999765
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=92.02 E-value=0.14 Score=52.08 Aligned_cols=36 Identities=11% Similarity=-0.027 Sum_probs=29.7
Q ss_pred CCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 612 PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 612 p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
+.+.+.++|+.|.+ .+..++|+||+....++..+..
T Consensus 145 ~~~~~~~~l~~l~~-~g~~~~i~T~~~~~~~~~~~~~ 180 (280)
T 3skx_A 145 IRPESREAISKLKA-IGIKCMMLTGDNRFVAKWVAEE 180 (280)
T ss_dssp ECTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHH
T ss_pred CCHhHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHH
Confidence 34678889999986 5889999999999988877764
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=91.81 E-value=0.096 Score=55.60 Aligned_cols=36 Identities=11% Similarity=0.063 Sum_probs=29.8
Q ss_pred CCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 612 PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 612 p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
+.+.+.++|+.|.+ .+..++|+||.....++..+..
T Consensus 180 l~pg~~e~L~~Lk~-~G~~v~IvSn~~~~~~~~~l~~ 215 (317)
T 4eze_A 180 LSPGLLTILPVIKA-KGFKTAIISGGLDIFTQRLKAR 215 (317)
T ss_dssp BCTTHHHHHHHHHH-TTCEEEEEEEEEHHHHHHHHHH
T ss_pred ECcCHHHHHHHHHh-CCCEEEEEeCccHHHHHHHHHH
Confidence 55778899999986 5899999999998887777653
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=91.57 E-value=0.055 Score=53.38 Aligned_cols=34 Identities=12% Similarity=0.074 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 614 QAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 614 ~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
+.+.++|+.|.+ .+..++|+|+.+...+..++..
T Consensus 98 ~~~~~~l~~l~~-~g~~~~i~t~~~~~~~~~~l~~ 131 (232)
T 1zrn_A 98 SEVPDSLRELKR-RGLKLAILSNGSPQSIDAVVSH 131 (232)
T ss_dssp TTHHHHHHHHHH-TTCEEEEEESSCHHHHHHHHHH
T ss_pred ccHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHh
Confidence 566778888886 5889999999998887777653
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=91.57 E-value=1.2 Score=52.76 Aligned_cols=176 Identities=13% Similarity=0.106 Sum_probs=106.4
Q ss_pred CCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccE
Q 004314 335 GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPV 414 (761)
Q Consensus 335 ~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV 414 (761)
+..++.+..++ .|=-+..+..+.++|++-|+-+ |++...+. ... +.+.+.+++ +|- +-..|
T Consensus 522 ~~v~f~~fN~~--~Ki~p~~~~~W~~IL~~vP~S~----L~Ll~~~~----~~~----~~l~~~~~~----~gi-~~~r~ 582 (723)
T 4gyw_A 522 DAIVYCNFNQL--YKIDPSTLQMWANILKRVPNSV----LWLLRFPA----VGE----PNIQQYAQN----MGL-PQNRI 582 (723)
T ss_dssp TSEEEECCSCG--GGCCHHHHHHHHHHHHHCSSEE----EEEEETTG----GGH----HHHHHHHHH----TTC-CGGGE
T ss_pred CCEEEEeCCcc--ccCCHHHHHHHHHHHHhCCCCe----EEEEeCcH----HHH----HHHHHHHHh----cCC-CcCeE
Confidence 44445445655 4556888999999999999865 76665432 111 233333333 232 22468
Q ss_pred EEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcC---CCC-Ccccc-c
Q 004314 415 VFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSE---FIG-CSPSL-S 489 (761)
Q Consensus 415 ~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se---~~G-~~~~l-~ 489 (761)
+|.. ..+.++..+.|+.+||++-|--+-| +.+..||+.+|. |||.=. |+| ++.++ .
T Consensus 583 ~f~~-~~~~~~~l~~~~~~Di~LDt~p~~g-~tT~~eal~~Gv-----------------Pvvt~~g~~~~sR~~~s~l~ 643 (723)
T 4gyw_A 583 IFSP-VAPKEEHVRRGQLADVCLDTPLCNG-HTTGMDVLWAGT-----------------PMVTMPGETLASRVAASQLT 643 (723)
T ss_dssp EEEE-CCCHHHHHHHGGGCSEEECCSSSCC-SHHHHHHHHTTC-----------------CEEBCCCSSGGGTHHHHHHH
T ss_pred EECC-CCCHHHHHHHhCCCeEEeCCCCcCC-HHHHHHHHHcCC-----------------CEEEccCCCccHhHHHHHHH
Confidence 8765 6789999999999999999998877 789999999975 444311 111 01111 1
Q ss_pred --C--cEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhh---CCHHHHHHHHHHHHHHHHHhh
Q 004314 490 --G--AIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVST---HDVAYWARSFFQDMERTCKDH 551 (761)
Q Consensus 490 --~--al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~---~~~~~Wa~~~l~~l~~~~~~~ 551 (761)
| -+++ .|.++-.+.-.++-++++ .+....+++++...+ +|...|++.|-..+....+..
T Consensus 644 ~~gl~e~ia--~~~~~Y~~~a~~la~d~~-~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~r~ 709 (723)
T 4gyw_A 644 CLGCLELIA--KNRQEYEDIAVKLGTDLE-YLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWEHY 709 (723)
T ss_dssp HHTCGGGBC--SSHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCccccc--CCHHHHHHHHHHHhcCHH-HHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHHHH
Confidence 1 1222 355555443333334433 333333445555443 689999998888887776543
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=91.30 E-value=0.15 Score=51.37 Aligned_cols=32 Identities=13% Similarity=0.094 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 614 QAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 614 ~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
+.+.++|+.|. +..++|+|+.+...++..+..
T Consensus 96 ~~~~~~l~~l~---g~~~~i~t~~~~~~~~~~l~~ 127 (253)
T 1qq5_A 96 PDAAQCLAELA---PLKRAILSNGAPDMLQALVAN 127 (253)
T ss_dssp TTHHHHHHHHT---TSEEEEEESSCHHHHHHHHHH
T ss_pred ccHHHHHHHHc---CCCEEEEeCcCHHHHHHHHHH
Confidence 45666777776 688999999998877776653
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=91.22 E-value=0.22 Score=50.20 Aligned_cols=33 Identities=12% Similarity=0.044 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhcc
Q 004314 614 QAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (761)
Q Consensus 614 ~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~ 647 (761)
+.+.++|+.|.+ .+..++|+|+.+...+...+.
T Consensus 114 ~~~~~~l~~l~~-~g~~~~i~tn~~~~~~~~~l~ 146 (277)
T 3iru_A 114 PGWKEVFDKLIA-QGIKVGGNTGYGPGMMAPALI 146 (277)
T ss_dssp TTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHH
T ss_pred cCHHHHHHHHHH-cCCeEEEEeCCchHHHHHHHH
Confidence 445677888875 578999999999877766654
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=90.91 E-value=0.076 Score=51.27 Aligned_cols=32 Identities=6% Similarity=0.162 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 614 QAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 614 ~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
+.+.+ |+.|.+ . ..++|+|+.+...++..+..
T Consensus 77 ~~~~~-l~~l~~-~-~~~~i~t~~~~~~~~~~l~~ 108 (201)
T 2w43_A 77 EDTKY-LKEISE-I-AEVYALSNGSINEVKQHLER 108 (201)
T ss_dssp GGGGG-HHHHHH-H-SEEEEEESSCHHHHHHHHHH
T ss_pred CChHH-HHHHHh-C-CeEEEEeCcCHHHHHHHHHH
Confidence 44556 788875 3 89999999998887777654
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=90.70 E-value=0.17 Score=48.82 Aligned_cols=35 Identities=11% Similarity=0.265 Sum_probs=27.3
Q ss_pred CCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhcc
Q 004314 612 PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (761)
Q Consensus 612 p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~ 647 (761)
+.+.+.++|+.|.+ .+..++|+|+.....++..+.
T Consensus 83 ~~~~~~~~l~~l~~-~g~~~~i~s~~~~~~~~~~~~ 117 (219)
T 3kd3_A 83 LTDGIKELVQDLKN-KGFEIWIFSGGLSESIQPFAD 117 (219)
T ss_dssp BCTTHHHHHHHHHH-TTCEEEEEEEEEHHHHHHHHH
T ss_pred CChhHHHHHHHHHH-CCCeEEEEcCCcHHHHHHHHH
Confidence 44567788888886 588999999998887776665
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=90.65 E-value=2 Score=46.45 Aligned_cols=138 Identities=14% Similarity=0.064 Sum_probs=82.6
Q ss_pred CCCeEEEeecCcc-ccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCc
Q 004314 334 EGKTVLLGVDDMD-IFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYE 412 (761)
Q Consensus 334 ~~~~vil~VdRld-~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~ 412 (761)
..+.|+++.|++. ..+.+...++|++++ +++ +|.++++.... . .+ . ..
T Consensus 220 ~~~~Vlv~~Gs~~~~~~~~~~~~~al~~~-----~~~----vv~~~g~~~~~-----~-----------~~----~--~~ 268 (404)
T 3h4t_A 220 GSPPVYVGFGSGPAPAEAARVAIEAVRAQ-----GRR----VVLSSGWAGLG-----R-----------ID----E--GD 268 (404)
T ss_dssp SSCCEEECCTTSCCCTTHHHHHHHHHHHT-----TCC----EEEECTTTTCC-----C-----------SS----C--CT
T ss_pred CCCeEEEECCCCCCcHHHHHHHHHHHHhC-----CCE----EEEEeCCcccc-----c-----------cc----C--CC
Confidence 3467888899998 566666667776653 232 33333221100 0 00 0 12
Q ss_pred cEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccc----c
Q 004314 413 PVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPS----L 488 (761)
Q Consensus 413 pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~----l 488 (761)
.|.+. +.++..+ ++..||++|..+ |. .+..|++++|. |+|+--+.|-... +
T Consensus 269 ~v~~~-~~~~~~~---ll~~~d~~v~~g---G~-~t~~Eal~~Gv-----------------P~v~~p~~~dQ~~na~~~ 323 (404)
T 3h4t_A 269 DCLVV-GEVNHQV---LFGRVAAVVHHG---GA-GTTTAVTRAGA-----------------PQVVVPQKADQPYYAGRV 323 (404)
T ss_dssp TEEEE-SSCCHHH---HGGGSSEEEECC---CH-HHHHHHHHHTC-----------------CEEECCCSTTHHHHHHHH
T ss_pred CEEEe-cCCCHHH---HHhhCcEEEECC---cH-HHHHHHHHcCC-----------------CEEEcCCcccHHHHHHHH
Confidence 35544 5777655 557899998544 33 46789999986 6666555442211 2
Q ss_pred ---cCcEEECCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhh
Q 004314 489 ---SGAIRVNPW--NIEATAEAMHEAIQMNEAEKQLRHEKHYRYVST 530 (761)
Q Consensus 489 ---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~ 530 (761)
..|+.+++. +.+++++++.++|+ + +.+.++++..+.+..
T Consensus 324 ~~~G~g~~l~~~~~~~~~l~~ai~~ll~-~--~~~~~~~~~~~~~~~ 367 (404)
T 3h4t_A 324 ADLGVGVAHDGPTPTVESLSAALATALT-P--GIRARAAAVAGTIRT 367 (404)
T ss_dssp HHHTSEEECSSSSCCHHHHHHHHHHHTS-H--HHHHHHHHHHTTCCC
T ss_pred HHCCCEeccCcCCCCHHHHHHHHHHHhC-H--HHHHHHHHHHHHHhh
Confidence 236677653 78999999999998 3 455556665555544
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=90.44 E-value=0.11 Score=49.99 Aligned_cols=34 Identities=26% Similarity=0.312 Sum_probs=24.2
Q ss_pred CCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhc
Q 004314 612 PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWF 646 (761)
Q Consensus 612 p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f 646 (761)
+.+.+.+.|+.|.+ .+..++|+|+.+...+..++
T Consensus 92 ~~~~~~~~l~~l~~-~g~~~~i~t~~~~~~~~~~~ 125 (206)
T 2b0c_A 92 LRPEVIAIMHKLRE-QGHRVVVLSNTNRLHTTFWP 125 (206)
T ss_dssp ECHHHHHHHHHHHH-TTCEEEEEECCCCCTTSCCG
T ss_pred cCccHHHHHHHHHH-CCCeEEEEECCChHHHHHHH
Confidence 34677788888875 47888999988766644433
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=89.90 E-value=0.18 Score=49.40 Aligned_cols=34 Identities=9% Similarity=0.062 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 614 QAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 614 ~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
+.+.++|+.|.+ .+..++|+|+.+...+...+..
T Consensus 102 ~~~~~~l~~l~~-~g~~~~i~t~~~~~~~~~~l~~ 135 (233)
T 3umb_A 102 PENVPVLRQLRE-MGLPLGILSNGNPQMLEIAVKS 135 (233)
T ss_dssp TTHHHHHHHHHT-TTCCEEEEESSCHHHHHHHHHT
T ss_pred CCHHHHHHHHHh-CCCcEEEEeCCCHHHHHHHHHH
Confidence 456677888885 5789999999999888777654
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=89.87 E-value=0.11 Score=51.25 Aligned_cols=48 Identities=8% Similarity=0.176 Sum_probs=34.7
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHH-HHHHHHHHhcCCCeEEEEcCCChhh
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAV-ISIINTLCNDARNTVFVVSGRGRDC 641 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~-~~~L~~L~~d~~n~V~IvSGR~~~~ 641 (761)
+.|+|+||+||||++. .....+.+ .++++++.. +...+...+|++...
T Consensus 24 ~~k~i~fDlDGTL~d~---~~~~~~~~~~~~~~~~g~-~~~~~~~~~g~~~~~ 72 (231)
T 3kzx_A 24 QPTAVIFDWYNTLIDT---SINIDRTTFYQVLDQMGY-KNIDLDSIPNSTIPK 72 (231)
T ss_dssp CCSEEEECTBTTTEET---TSSCCHHHHHHHHHHTTC-CCCCCTTSCTTTHHH
T ss_pred CCCEEEECCCCCCcCC---chhHHHHHHHHHHHHcCC-CHHHHHHHhCccHHH
Confidence 4689999999999973 34456777 888888764 345566677777553
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=89.56 E-value=0.17 Score=49.77 Aligned_cols=35 Identities=20% Similarity=0.283 Sum_probs=28.6
Q ss_pred CHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 613 SQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 613 ~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
.+.+.++|+.|.+ .+..++|+||.....++..+..
T Consensus 88 ~~g~~~~l~~L~~-~g~~~~i~T~~~~~~~~~~l~~ 122 (225)
T 1nnl_A 88 TPGIRELVSRLQE-RNVQVFLISGGFRSIVEHVASK 122 (225)
T ss_dssp CTTHHHHHHHHHH-TTCEEEEEEEEEHHHHHHHHHH
T ss_pred CccHHHHHHHHHH-CCCcEEEEeCChHHHHHHHHHH
Confidence 4567788999886 5899999999999888777764
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=89.54 E-value=0.67 Score=50.39 Aligned_cols=137 Identities=11% Similarity=0.022 Sum_probs=81.7
Q ss_pred CCeEEEeecCcc---ccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCC
Q 004314 335 GKTVLLGVDDMD---IFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGY 411 (761)
Q Consensus 335 ~~~vil~VdRld---~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~ 411 (761)
...|+++.|++. ..|.+...++|++++ + .+ ++.+.++. . .+ . ....
T Consensus 237 ~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~----~-~~----~v~~~g~~--~-~~---~------------~~~~---- 285 (416)
T 1rrv_A 237 SPPVHIGFGSSSGRGIADAAKVAVEAIRAQ----G-RR----VILSRGWT--E-LV---L------------PDDR---- 285 (416)
T ss_dssp SCCEEECCTTCCSHHHHHHHHHHHHHHHHT----T-CC----EEEECTTT--T-CC---C------------SCCC----
T ss_pred CCeEEEecCCCCccChHHHHHHHHHHHHHC----C-Ce----EEEEeCCc--c-cc---c------------cCCC----
Confidence 356888899984 566666677776643 2 22 43333221 0 00 0 0111
Q ss_pred ccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCC----Cccc
Q 004314 412 EPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIG----CSPS 487 (761)
Q Consensus 412 ~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~~~ 487 (761)
..|.+ .+.++..+ +|..||++|. +-|.| +..|+++||. |+|+--+.+ .+..
T Consensus 286 ~~v~~-~~~~~~~~---ll~~~d~~v~---~~G~~-t~~Ea~~~G~-----------------P~i~~p~~~dQ~~na~~ 340 (416)
T 1rrv_A 286 DDCFA-IDEVNFQA---LFRRVAAVIH---HGSAG-TEHVATRAGV-----------------PQLVIPRNTDQPYFAGR 340 (416)
T ss_dssp TTEEE-ESSCCHHH---HGGGSSEEEE---CCCHH-HHHHHHHHTC-----------------CEEECCCSBTHHHHHHH
T ss_pred CCEEE-eccCChHH---HhccCCEEEe---cCChh-HHHHHHHcCC-----------------CEEEccCCCCcHHHHHH
Confidence 13553 45778654 5699999996 45554 9999999986 666644432 2333
Q ss_pred c---cCcEEECC--CCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhh
Q 004314 488 L---SGAIRVNP--WNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVST 530 (761)
Q Consensus 488 l---~~al~VnP--~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~ 530 (761)
+ ..|+.+++ .+.++++++|.++ +.+ +.+.++++..+.+..
T Consensus 341 l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~--~~~~~~~~~~~~~~~ 385 (416)
T 1rrv_A 341 VAALGIGVAHDGPTPTFESLSAALTTV-LAP--ETRARAEAVAGMVLT 385 (416)
T ss_dssp HHHHTSEEECSSSCCCHHHHHHHHHHH-TSH--HHHHHHHHHTTTCCC
T ss_pred HHHCCCccCCCCCCCCHHHHHHHHHHh-hCH--HHHHHHHHHHHHHhh
Confidence 3 23677765 5789999999998 643 455555555444443
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=89.39 E-value=0.092 Score=52.66 Aligned_cols=51 Identities=16% Similarity=0.068 Sum_probs=31.3
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeE--EE-------------EcCCChhhHHh
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTV--FV-------------VSGRGRDCLGK 644 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V--~I-------------vSGR~~~~L~~ 644 (761)
..|+|+||+||||++.. ....+.+.++++++.+ .+..+ .+ .+||+...+.+
T Consensus 12 ~~k~iifDlDGTL~d~~---~~~~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 77 (251)
T 2pke_A 12 AIQLVGFDGDDTLWKSE---DYYRTAEADFEAILSG-YLDLGDSRMQQHLLAVERRNLKIFGYGAKGMTL 77 (251)
T ss_dssp SCCEEEECCBTTTBCCH---HHHHHHHHHHHHHHTT-TCCC-----CTTHHHHHHHHHHHHCSSHHHHHH
T ss_pred ceeEEEEeCCCCCccCc---HhHHHHHHHHHHHHHH-hCCchhHHHHHHHHHHHhhhhhhccCcchHHHH
Confidence 36899999999999832 2223455666666654 45554 12 46888765443
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=88.73 E-value=0.039 Score=54.27 Aligned_cols=53 Identities=15% Similarity=0.041 Sum_probs=35.9
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhcc
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~ 647 (761)
.|+|+||+||||++.. ....+....+++.+.. .+..+..++||....+.+.+.
T Consensus 2 ik~i~fDlDGTL~~~~---~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~ 54 (230)
T 3vay_A 2 IKLVTFDLDDTLWDTA---PAIVGAEAALRDWLAE-QAPKLGPVPVEHLWEIRSRLL 54 (230)
T ss_dssp CCEEEECCBTTTBCSH---HHHHHHHHHHHHHHHH-HCTTTCSCCHHHHHHHHHHHH
T ss_pred eeEEEecCcccCcCCc---hHHHHHHHHHHHHHHH-hcCcchhhHHHHHHHHHHHHH
Confidence 5799999999999832 1223445566666665 355666778888877766653
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=88.11 E-value=0.43 Score=46.30 Aligned_cols=35 Identities=6% Similarity=-0.001 Sum_probs=27.8
Q ss_pred CCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhcc
Q 004314 612 PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (761)
Q Consensus 612 p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~ 647 (761)
+.+.+.++|+.|.+ .+..++|+|+.+...+...+.
T Consensus 85 ~~pg~~~~l~~L~~-~g~~~~i~tn~~~~~~~~~l~ 119 (216)
T 3kbb_A 85 ENPGVREALEFVKS-KRIKLALATSTPQREALERLR 119 (216)
T ss_dssp BCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHH
T ss_pred cCccHHHHHHHHHH-cCCCcccccCCcHHHHHHHHH
Confidence 44567788889886 589999999999887776654
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=87.06 E-value=0.45 Score=49.20 Aligned_cols=69 Identities=10% Similarity=0.128 Sum_probs=53.5
Q ss_pred HHHHHHHHHhccceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 579 IDAIVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 579 ~~~i~~~y~~s~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
.+.....|.....++|++|+||++...-.....+.+.+.++|+.|.+ .+..++|+||++...++..+..
T Consensus 131 ~~~~~~~~~~~g~~~i~~~~d~~~~~~~~~~~~~~~g~~~~l~~L~~-~g~~~~i~T~~~~~~~~~~l~~ 199 (287)
T 3a1c_A 131 VELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKR-MGIKVGMITGDNWRSAEAISRE 199 (287)
T ss_dssp HHHHHHHHHHTTCEEEEEEETTEEEEEEEEECCBCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCeEEEEEECCEEEEEEEeccccchhHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHH
Confidence 34566677777789999999999865321234567899999999986 5899999999999988877754
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=86.38 E-value=0.39 Score=51.61 Aligned_cols=88 Identities=10% Similarity=0.041 Sum_probs=55.7
Q ss_pred EcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCC----Cccccc--C
Q 004314 417 IDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIG----CSPSLS--G 490 (761)
Q Consensus 417 ~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~~~l~--~ 490 (761)
+.+.+|+.+ ++..+|+||. +-|+| +..|+++||. |+|+--+.+ .+..+. |
T Consensus 292 ~~~~~p~~~---lL~~~~~~v~---h~G~~-s~~Eal~~Gv-----------------P~v~~P~~~dQ~~na~~v~~~G 347 (400)
T 4amg_A 292 VVEWIPLGA---LLETCDAIIH---HGGSG-TLLTALAAGV-----------------PQCVIPHGSYQDTNRDVLTGLG 347 (400)
T ss_dssp EECCCCHHH---HHTTCSEEEE---CCCHH-HHHHHHHHTC-----------------CEEECCC---CHHHHHHHHHHT
T ss_pred EEeecCHHH---Hhhhhhheec---cCCcc-HHHHHHHhCC-----------------CEEEecCcccHHHHHHHHHHCC
Confidence 445777655 5678999774 44665 6789999986 666644433 223331 3
Q ss_pred -cEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCC
Q 004314 491 -AIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHD 532 (761)
Q Consensus 491 -al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~ 532 (761)
|+.+++. +.++++|.++|+++ +.+++.+++.+.+...+
T Consensus 348 ~g~~l~~~--~~~~~al~~lL~d~--~~r~~a~~l~~~~~~~~ 386 (400)
T 4amg_A 348 IGFDAEAG--SLGAEQCRRLLDDA--GLREAALRVRQEMSEMP 386 (400)
T ss_dssp SEEECCTT--TCSHHHHHHHHHCH--HHHHHHHHHHHHHHTSC
T ss_pred CEEEcCCC--CchHHHHHHHHcCH--HHHHHHHHHHHHHHcCC
Confidence 6666654 45789999999865 45556666666665543
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=85.05 E-value=0.84 Score=44.74 Aligned_cols=59 Identities=7% Similarity=0.019 Sum_probs=45.0
Q ss_pred hccceeEEecCCCcCCCCCCC--C------------------CCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhcc
Q 004314 588 RSKSRAILFDYDGTVMPQTSI--N------------------KAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (761)
Q Consensus 588 ~s~~rlI~lDyDGTL~~~~~~--~------------------~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~ 647 (761)
..+++.++||+||||+..... . ...-+.+.+.|+.|.+ ...++|+|.......+..+.
T Consensus 25 ~~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~g~~~~~~v~~RPgv~efL~~l~~--~~~i~I~Tss~~~~a~~vl~ 102 (195)
T 2hhl_A 25 DYGKKCVVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQ--LFECVLFTASLAKYADPVAD 102 (195)
T ss_dssp GTTCCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHH--HSEEEEECSSCHHHHHHHHH
T ss_pred cCCCeEEEEccccceEcccccCCCCccceeeeecCCceeeEEEEeCcCHHHHHHHHHc--CCeEEEEcCCCHHHHHHHHH
Confidence 456889999999999964211 0 1234788999999997 38999999999988877765
Q ss_pred C
Q 004314 648 P 648 (761)
Q Consensus 648 ~ 648 (761)
.
T Consensus 103 ~ 103 (195)
T 2hhl_A 103 L 103 (195)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=85.02 E-value=0.41 Score=48.15 Aligned_cols=30 Identities=27% Similarity=0.488 Sum_probs=20.3
Q ss_pred cceeEEecCCCcCCCCCCCCC-CCCHHHHHHHHH
Q 004314 590 KSRAILFDYDGTVMPQTSINK-APSQAVISIINT 622 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~-~p~~~~~~~L~~ 622 (761)
+.|+|+||+||||++.. . ...+.+.+++++
T Consensus 5 ~ik~i~fDlDGTLld~~---~~~~~~~~~~~l~~ 35 (267)
T 1swv_A 5 KIEAVIFAWAGTTVDYG---CFAPLEVFMEIFHK 35 (267)
T ss_dssp CCCEEEECSBTTTBSTT---CCTTHHHHHHHHHT
T ss_pred CceEEEEecCCCEEeCC---CccHHHHHHHHHHH
Confidence 46899999999999842 2 234555555544
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=84.36 E-value=0.21 Score=49.18 Aligned_cols=18 Identities=28% Similarity=0.604 Sum_probs=15.1
Q ss_pred hccceeEEecCCCcCCCC
Q 004314 588 RSKSRAILFDYDGTVMPQ 605 (761)
Q Consensus 588 ~s~~rlI~lDyDGTL~~~ 605 (761)
..+.|+|+||+||||++.
T Consensus 16 ~~~ik~i~fDlDGTL~d~ 33 (237)
T 4ex6_A 16 AAADRGVILDLDGTLADT 33 (237)
T ss_dssp -CCCEEEEECSBTTTBCC
T ss_pred cccCCEEEEcCCCCCcCC
Confidence 457899999999999973
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=84.02 E-value=0.23 Score=48.31 Aligned_cols=32 Identities=19% Similarity=0.146 Sum_probs=21.4
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHh
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCN 625 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~ 625 (761)
.|+|+||+||||++.. ...++.+..+++.|.+
T Consensus 8 ik~i~fDlDGTL~~~~---~~~~~~~~~~~~~l~~ 39 (234)
T 3ddh_A 8 IKVIAFDADDTLWSNE---PFFQEVEKQYTDLLKP 39 (234)
T ss_dssp CCEEEECCBTTTBCCH---HHHHHHHHHHHHHTGG
T ss_pred ccEEEEeCCCCCccCc---chHHHHHHHHHHHHHh
Confidence 6899999999999842 1223344555666654
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=84.00 E-value=0.41 Score=52.43 Aligned_cols=36 Identities=19% Similarity=0.053 Sum_probs=29.1
Q ss_pred CCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 612 PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 612 p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
+.+.+.++|+.|.+ .+..++|+||.....++..+..
T Consensus 257 ~~pg~~e~l~~Lk~-~G~~~~ivS~~~~~~~~~~~~~ 292 (415)
T 3p96_A 257 LMPGARTTLRTLRR-LGYACGVVSGGFRRIIEPLAEE 292 (415)
T ss_dssp BCTTHHHHHHHHHH-TTCEEEEEEEEEHHHHHHHHHH
T ss_pred cCccHHHHHHHHHH-CCCEEEEEcCCcHHHHHHHHHH
Confidence 45677889999986 5899999999988877777654
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=83.91 E-value=0.2 Score=47.62 Aligned_cols=30 Identities=20% Similarity=0.365 Sum_probs=19.9
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHH
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTL 623 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L 623 (761)
.|+|++|+||||++.. ....+.+.++++++
T Consensus 4 ~k~i~fDlDGTL~~~~---~~~~~~~~~~~~~~ 33 (207)
T 2go7_A 4 KTAFIWDLDGTLLDSY---EAILSGIEETFAQF 33 (207)
T ss_dssp CCEEEECTBTTTEECH---HHHHHHHHHHHHHH
T ss_pred ccEEEEeCCCcccccH---HHHHHHHHHHHHHc
Confidence 5899999999999732 12234455555554
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=83.70 E-value=0.18 Score=48.87 Aligned_cols=50 Identities=16% Similarity=0.121 Sum_probs=28.1
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCC---eEEEEcCCChhhHH
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARN---TVFVVSGRGRDCLG 643 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n---~V~IvSGR~~~~L~ 643 (761)
+.|+|++|+||||++.. ....+.+.++++++... .. .+...+|++...+.
T Consensus 5 ~~k~v~fDlDGTL~d~~---~~~~~~~~~~~~~~g~~-~~~~~~~~~~~g~~~~~~~ 57 (225)
T 3d6j_A 5 KYTVYLFDFDYTLADSS---RGIVTCFRSVLERHGYT-GITDDMIKRTIGKTLEESF 57 (225)
T ss_dssp CCSEEEECCBTTTEECH---HHHHHHHHHHHHHTTCC-CCCHHHHHTTTTSCHHHHH
T ss_pred CCCEEEEeCCCCCCCCH---HHHHHHHHHHHHHhCCC-CCCHHHHHHHhCCcHHHHH
Confidence 36899999999999732 12234455566554321 11 22334566555433
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=83.37 E-value=0.83 Score=44.14 Aligned_cols=59 Identities=8% Similarity=0.026 Sum_probs=44.6
Q ss_pred hccceeEEecCCCcCCCCCCC--C------------------CCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhcc
Q 004314 588 RSKSRAILFDYDGTVMPQTSI--N------------------KAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (761)
Q Consensus 588 ~s~~rlI~lDyDGTL~~~~~~--~------------------~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~ 647 (761)
..+++.++||+||||+..... . ...-+.+.+.|++|.+ ...++|+|.......+..+.
T Consensus 12 ~~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~~~~~~~~v~~rPg~~efL~~l~~--~~~i~I~T~~~~~~a~~vl~ 89 (181)
T 2ght_A 12 DSDKICVVINLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGE--LFECVLFTASLAKYADPVAD 89 (181)
T ss_dssp GTTSCEEEECCBTTTEEEESSCCSSCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHH--HSEEEEECSSCHHHHHHHHH
T ss_pred cCCCeEEEECCCCCeECCcccCCCCccceeeeeeCCeeEEEEEEeCCCHHHHHHHHHh--CCCEEEEcCCCHHHHHHHHH
Confidence 346789999999999963211 0 1235788999999997 38999999999988777665
Q ss_pred C
Q 004314 648 P 648 (761)
Q Consensus 648 ~ 648 (761)
.
T Consensus 90 ~ 90 (181)
T 2ght_A 90 L 90 (181)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=83.33 E-value=0.19 Score=47.61 Aligned_cols=14 Identities=21% Similarity=0.522 Sum_probs=13.1
Q ss_pred ceeEEecCCCcCCC
Q 004314 591 SRAILFDYDGTVMP 604 (761)
Q Consensus 591 ~rlI~lDyDGTL~~ 604 (761)
.|+|+||+||||++
T Consensus 6 ~k~i~fDlDGTL~d 19 (190)
T 2fi1_A 6 YHDYIWDLGGTLLD 19 (190)
T ss_dssp CSEEEECTBTTTBC
T ss_pred ccEEEEeCCCCcCC
Confidence 68999999999997
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=83.02 E-value=0.2 Score=48.54 Aligned_cols=48 Identities=21% Similarity=0.279 Sum_probs=27.8
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhc-C-CCeEEEEcCCChhh
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCND-A-RNTVFVVSGRGRDC 641 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d-~-~n~V~IvSGR~~~~ 641 (761)
.|+|++|+||||++.. ...++.+.++++++... . ...+...+||+...
T Consensus 2 ~k~i~fDlDGTL~d~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~ 51 (221)
T 2wf7_A 2 FKAVLFDLDGVITDTA---EYHFRAWKALAEEIGINGVDRQFNEQLKGVSRED 51 (221)
T ss_dssp CCEEEECCBTTTBTHH---HHHHHHHHHHHHHTTCCCCSHHHHTTTTTCCHHH
T ss_pred CcEEEECCCCcccCCh---HHHHHHHHHHHHHcCCCCCCHHHHHHhCCCCHHH
Confidence 4799999999999732 22234455666665321 0 11223467777554
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=82.78 E-value=0.44 Score=45.56 Aligned_cols=16 Identities=44% Similarity=0.841 Sum_probs=14.1
Q ss_pred cceeEEecCCCcCCCC
Q 004314 590 KSRAILFDYDGTVMPQ 605 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~ 605 (761)
+.|+|+||+||||++.
T Consensus 4 ~~k~i~fDlDGTL~d~ 19 (211)
T 1l7m_A 4 KKKLILFDFDSTLVNN 19 (211)
T ss_dssp CCEEEEEECCCCCBSS
T ss_pred CCcEEEEeCCCCCCCc
Confidence 4689999999999974
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=82.33 E-value=0.26 Score=47.66 Aligned_cols=48 Identities=25% Similarity=0.288 Sum_probs=27.7
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcC--CCeEEEEcCCChhh
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDA--RNTVFVVSGRGRDC 641 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~--~n~V~IvSGR~~~~ 641 (761)
.|+|++|+||||++.. ....+.+.++++++-... ...+...+|+....
T Consensus 9 ~k~i~fDlDGTL~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~ 58 (226)
T 1te2_A 9 ILAAIFDMDGLLIDSE---PLWDRAELDVMASLGVDISRRNELPDTLGLRIDM 58 (226)
T ss_dssp CCEEEECCBTTTBCCH---HHHHHHHHHHHHHTTCCGGGGGGSCCCTTCCHHH
T ss_pred CCEEEECCCCCcCcCH---HHHHHHHHHHHHHcCCCCChHHHHHHHhCCCHHH
Confidence 6899999999999832 122344455555543210 01233567777654
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=82.28 E-value=0.26 Score=48.12 Aligned_cols=30 Identities=10% Similarity=0.061 Sum_probs=19.4
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHH
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTL 623 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L 623 (761)
.|+|+||+||||++.. ....+.+.++++++
T Consensus 4 ~k~i~fDlDGTL~d~~---~~~~~~~~~~~~~~ 33 (235)
T 2om6_A 4 VKLVTFDVWNTLLDLN---IMLDEFSHQLAKIS 33 (235)
T ss_dssp CCEEEECCBTTTBCHH---HHHHHHHHHHHHHH
T ss_pred ceEEEEeCCCCCCCcc---hhHHHHHHHHHHHc
Confidence 5899999999999732 12233444555544
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=82.25 E-value=0.27 Score=47.92 Aligned_cols=15 Identities=33% Similarity=0.620 Sum_probs=13.5
Q ss_pred ceeEEecCCCcCCCC
Q 004314 591 SRAILFDYDGTVMPQ 605 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~ 605 (761)
.|+|++|+||||++.
T Consensus 4 ik~i~fDlDGTL~d~ 18 (229)
T 2fdr_A 4 FDLIIFDCDGVLVDS 18 (229)
T ss_dssp CSEEEECSBTTTBCC
T ss_pred ccEEEEcCCCCcCcc
Confidence 589999999999983
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=81.68 E-value=0.81 Score=43.62 Aligned_cols=16 Identities=19% Similarity=0.582 Sum_probs=13.9
Q ss_pred cceeEEecCCCcCCCC
Q 004314 590 KSRAILFDYDGTVMPQ 605 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~ 605 (761)
+.|+|+||+||||++.
T Consensus 3 ~~k~viFDlDGTL~d~ 18 (200)
T 3cnh_A 3 TIKALFWDIGGVLLTN 18 (200)
T ss_dssp CCCEEEECCBTTTBCC
T ss_pred CceEEEEeCCCeeECC
Confidence 3689999999999984
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=81.62 E-value=0.049 Score=55.96 Aligned_cols=15 Identities=47% Similarity=0.705 Sum_probs=13.5
Q ss_pred ceeEEecCCCcCCCC
Q 004314 591 SRAILFDYDGTVMPQ 605 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~ 605 (761)
.|+|++|+||||++.
T Consensus 35 ik~iifDlDGTLlds 49 (275)
T 2qlt_A 35 INAALFDVDGTIIIS 49 (275)
T ss_dssp ESEEEECCBTTTEEC
T ss_pred CCEEEECCCCCCCCC
Confidence 589999999999983
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=81.42 E-value=0.31 Score=48.34 Aligned_cols=16 Identities=44% Similarity=0.808 Sum_probs=14.1
Q ss_pred cceeEEecCCCcCCCC
Q 004314 590 KSRAILFDYDGTVMPQ 605 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~ 605 (761)
..|+|+||+||||++.
T Consensus 23 ~~k~i~fDlDGTL~d~ 38 (243)
T 3qxg_A 23 KLKAVLFDMDGVLFNS 38 (243)
T ss_dssp CCCEEEECSBTTTBCC
T ss_pred cCCEEEEcCCCCCCCC
Confidence 4689999999999983
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=80.76 E-value=0.27 Score=47.84 Aligned_cols=15 Identities=40% Similarity=0.656 Sum_probs=13.4
Q ss_pred ceeEEecCCCcCCCC
Q 004314 591 SRAILFDYDGTVMPQ 605 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~ 605 (761)
.|+|+||+||||++.
T Consensus 4 ~k~i~fDlDGTL~d~ 18 (226)
T 3mc1_A 4 YNYVLFDLDGTLTDS 18 (226)
T ss_dssp CCEEEECSBTTTBCC
T ss_pred CCEEEEeCCCccccC
Confidence 689999999999973
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=80.65 E-value=2.2 Score=44.09 Aligned_cols=49 Identities=24% Similarity=0.390 Sum_probs=38.4
Q ss_pred ceeEEecCCCcCCCCCCC---------CCCCCHHHHHHHHHHHhcCCCeEEEEcCCChh
Q 004314 591 SRAILFDYDGTVMPQTSI---------NKAPSQAVISIINTLCNDARNTVFVVSGRGRD 640 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~---------~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~ 640 (761)
.+.+++|.|||+...... ...+-+.+.++|+.|.+ .+..++|+|||+..
T Consensus 159 ~~~i~iD~dgtl~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~-~g~~~~v~T~k~~~ 216 (301)
T 1ltq_A 159 PKAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMYAL-MGYQIVVVSGRESG 216 (301)
T ss_dssp CEEEEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHHHH-TTCEEEEEECSCCC
T ss_pred cceEEEeCCCCcccccCCCchhhhhccccCCChHHHHHHHHHHH-CCCeEEEEeCCCcc
Confidence 467889999998764311 12357899999999996 58999999999854
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=80.56 E-value=0.27 Score=48.16 Aligned_cols=14 Identities=36% Similarity=0.802 Sum_probs=13.0
Q ss_pred ceeEEecCCCcCCC
Q 004314 591 SRAILFDYDGTVMP 604 (761)
Q Consensus 591 ~rlI~lDyDGTL~~ 604 (761)
.|+|+||+||||++
T Consensus 2 ik~i~fDlDGTL~d 15 (233)
T 3nas_A 2 LKAVIFDLDGVITD 15 (233)
T ss_dssp CCEEEECSBTTTBC
T ss_pred CcEEEECCCCCcCC
Confidence 58999999999997
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=80.41 E-value=0.29 Score=47.95 Aligned_cols=16 Identities=38% Similarity=0.696 Sum_probs=14.0
Q ss_pred cceeEEecCCCcCCCC
Q 004314 590 KSRAILFDYDGTVMPQ 605 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~ 605 (761)
+.|+|+||+||||++.
T Consensus 6 ~~k~i~fDlDGTL~d~ 21 (238)
T 3ed5_A 6 RYRTLLFDVDDTILDF 21 (238)
T ss_dssp CCCEEEECCBTTTBCH
T ss_pred cCCEEEEcCcCcCcCC
Confidence 4689999999999973
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=80.16 E-value=0.33 Score=46.33 Aligned_cols=16 Identities=38% Similarity=0.681 Sum_probs=14.0
Q ss_pred cceeEEecCCCcCCCC
Q 004314 590 KSRAILFDYDGTVMPQ 605 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~ 605 (761)
..|+|+||+||||++.
T Consensus 4 m~k~i~fDlDGTL~~~ 19 (214)
T 3e58_A 4 MVEAIIFDMDGVLFDT 19 (214)
T ss_dssp CCCEEEEESBTTTBCC
T ss_pred cccEEEEcCCCCcccc
Confidence 4689999999999983
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 761 | ||||
| d1uqta_ | 456 | c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA | 1e-123 | |
| d1u02a_ | 229 | c.108.1.15 (A:) Trehalose-6-phosphate phosphatase | 8e-16 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 6e-05 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 2e-04 |
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Score = 374 bits (961), Expect = e-123
Identities = 123/486 (25%), Positives = 233/486 (47%), Gaps = 34/486 (6%)
Query: 62 RVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSEQ 121
R+++V+N++ + G L + + G + ++ G + E
Sbjct: 2 RLVVVSNRIAPPDEHAASAGG---------LAVGIL-GALKAAGGLWFGWSGETGN--ED 49
Query: 122 DDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEA 181
+ ++ L L ++Y+ F LWP FHY L +F R W+
Sbjct: 50 QPLKKVKKGNITWASFNLSEQDLDEYYNQFSNAVLWPAFHYRLDLV-----QFQRPAWDG 104
Query: 182 YVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIY 241
Y+ N + + +++ ++ DD +WIHDYHL+ LR+R R+GFFLH PFP+ EI+
Sbjct: 105 YLRVNALLADKLLPLLQD-DDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIF 163
Query: 242 RTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGI 301
LP + +L+ L + DL+GF T + FL C S + + +S + + +G+
Sbjct: 164 NALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHT---AWGKAFRT 220
Query: 302 KIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHL 361
++ P+GI +I ++ +LK + + + V+ +D KG+ + LA E L
Sbjct: 221 EVYPIGIEPKEIAKQAA-GPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEAL 279
Query: 362 LKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPV 421
L+++P+ G+ QIA +RG + ++I+ ++ RIN +G+ G+ P+ ++++
Sbjct: 280 LEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHF 339
Query: 422 TLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEF 481
+ ++ +VT +RDGMNL EY+ + +LV+S+F
Sbjct: 340 DRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPA------------NPGVLVLSQF 387
Query: 482 IGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFF 541
G + L+ A+ VNP++ + A A+ A+ M+ AE+ RH + + +D+ +W F
Sbjct: 388 AGAANELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFI 447
Query: 542 QDMERT 547
D+++
Sbjct: 448 SDLKQI 453
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 229 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 75.0 bits (183), Expect = 8e-16
Identities = 29/162 (17%), Positives = 56/162 (34%), Gaps = 11/162 (6%)
Query: 594 ILFDYDGTVMP--QTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKK 651
I DYDGT++P ++S+I+ L R ++V+GR + + ++
Sbjct: 3 IFLDYDGTLVPIIMNPEESYADAGLLSLISDLK--ERFDTYIVTGRSPEEISRFLPLDI- 59
Query: 652 LGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWH 711
+ HG + N G G + + G I K A+++H
Sbjct: 60 -NMICYHGACS-KINGQIVYNNGSDRFLGVFDRIYEDTRSWVSDFPGLRIYRKNLAVLYH 117
Query: 712 HRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKP 753
+L +E + G+ I+E++
Sbjct: 118 LGLMGAD----MKPKLRSRIEEIARIFGVETYYGKMIIELRV 155
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 42.7 bits (99), Expect = 6e-05
Identities = 25/162 (15%), Positives = 51/162 (31%), Gaps = 18/162 (11%)
Query: 592 RAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKK 651
R D DG + T ++ S I I + TV ++SG + ++
Sbjct: 4 RLAAIDVDGNL---TDRDRLISTKAIESIRSA-EKKGLTVSLLSGN---VIPVVYALKIF 56
Query: 652 LGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWH 711
LGI +G + + N G F + ++ ++ T I
Sbjct: 57 LGI---NGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRTSMRSI--------LT 105
Query: 712 HRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKP 753
+R + G E +D++ + + + +
Sbjct: 106 NRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMN 147
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 41.2 bits (95), Expect = 2e-04
Identities = 23/159 (14%), Positives = 47/159 (29%), Gaps = 15/159 (9%)
Query: 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649
K +AI D DGT+ T N+ + + I + +V+G
Sbjct: 1 KIKAISIDIDGTI---TYPNRMIHEKALEAIRRA-ESLGIPIMLVTGNTVQFAEAASILI 56
Query: 650 KKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALV 709
G + + + + + + + K + + + + + LV
Sbjct: 57 ---GTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPNARTSYTMPDRRAGLV 113
Query: 710 WHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFI 748
+ E + + + L AV SG I
Sbjct: 114 IMRETINV--------ETVREIINELNLNLVAVDSGFAI 144
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 761 | |||
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 100.0 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.92 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 99.91 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.86 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 99.82 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 99.68 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.65 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.36 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.27 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.27 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.2 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.17 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 99.16 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.15 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.07 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.99 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.98 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.91 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 98.88 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.61 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 97.27 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 96.8 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 96.73 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 96.69 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 95.99 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 95.43 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 95.41 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 95.22 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 95.11 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 94.97 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 94.23 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 94.16 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 93.67 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 93.24 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 92.89 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 92.53 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 91.9 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 91.64 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 91.64 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 90.82 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 90.06 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 89.34 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 89.29 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 88.99 | |
| d1q92a_ | 195 | 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo | 88.72 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 88.42 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 88.1 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 87.34 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 85.45 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 85.14 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 84.2 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 83.15 |
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.9e-99 Score=856.52 Aligned_cols=453 Identities=27% Similarity=0.540 Sum_probs=416.0
Q ss_pred CeEEEEEcCCccceeecCCCCCeEEeecCCchhHhhhccCCCCCceEEEEccCCCCCcchhhhhHHhhccCeeEEEeecC
Q 004314 61 DRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSEQDDVSQLLLDRFKCVPAFLP 140 (761)
Q Consensus 61 ~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvG~~~~~~~~~~~~~v~~~l~~~~~~~pv~l~ 140 (761)
+||||||||+|+...+.. ++|||+++|.+.+. +.+++||||+|.+.++++ .+......+|+|+||+|+
T Consensus 1 srlivvsnr~~~~~~~~~---------~~gGl~~al~~~~~-~~~g~Wvgw~g~~~~~~~--~~~~~~~~~~~~~~v~l~ 68 (456)
T d1uqta_ 1 SRLVVVSNRIAPPDEHAA---------SAGGLAVGILGALK-AAGGLWFGWSGETGNEDQ--PLKKVKKGNITWASFNLS 68 (456)
T ss_dssp CCEEEEEEECCCCC-------------CCCHHHHHHHHHHH-HHCEEEEEEEEEESCCSS--CCEEEEETTEEEEEEEEC
T ss_pred CCEEEEECCCCCCCCCCC---------CCccHHHHhHHHHh-hCCCEEEecCCCCCcccc--hhhhhhccCceeEEecCC
Confidence 589999999999876532 46899999987554 589999999987654322 223334678999999999
Q ss_pred hhhhhhhhhccccccccccccccccCCCCCCCccChHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHH
Q 004314 141 PDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRR 220 (761)
Q Consensus 141 ~~~~~~~y~gf~~~~LWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~ 220 (761)
++++++||+||||++|||+|||+++. .+|++++|++|++||++||++|++.+++ +|+||||||||+++|.+||+
T Consensus 69 ~~~~~~~Y~gf~n~~LWpl~H~~~~~-----~~~~~~~~~~Y~~vN~~fA~~l~~~~~~-~d~iwvhDyhl~llp~~lR~ 142 (456)
T d1uqta_ 69 EQDLDEYYNQFSNAVLWPAFHYRLDL-----VQFQRPAWDGYLRVNALLADKLLPLLQD-DDIIWIHDYHLLPFAHELRK 142 (456)
T ss_dssp HHHHHHHTTTHHHHTHHHHHTTCGGG-----CCCCHHHHHHHHHHHHHHHHHHGGGCCT-TCEEEEESGGGTTHHHHHHH
T ss_pred HHHHHHHHHHhhhccccccccCcccc-----ccccHHHHHHHHHHHHHHHHHHHHhccC-CCeEEEeccchhhhHHHHHH
Confidence 99999999999999999999999876 5799999999999999999999999987 59999999999999999999
Q ss_pred hcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEE
Q 004314 221 RFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVG 300 (761)
Q Consensus 221 ~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~ 300 (761)
+.|+++||||+|+|||++++|+++|++++|+++|+++|+||||+++|++||++||.++++.+..... .+.+.|+.++
T Consensus 143 ~~~~~~i~~flH~pfP~~~~fr~lp~~~~il~~ll~~d~igf~~~~~~~~fl~~~~~ll~~~~~~~~---~i~~~gr~v~ 219 (456)
T d1uqta_ 143 RGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAK---SHTAWGKAFR 219 (456)
T ss_dssp TTCCSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTT---EEEETTEEEE
T ss_pred hCCCCcEEEEeCCCCCChHHhccCcchHHHHHHhhccccccccCHHHHHHHHHHHHHHhCcccccCC---eEEecCceee
Confidence 9999999999999999999999999999999999999999999999999999999999998765443 4678999999
Q ss_pred EEEeccccCcccchhhhccchHHHHHHHHHHHcCCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecC
Q 004314 301 IKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANP 380 (761)
Q Consensus 301 i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p 380 (761)
+.++|+|||++.|......+ ..+.+.+++.+++++++|++|||+|+.||+..+|+||++|+++||+++++++|+|++.|
T Consensus 220 v~~~p~GID~~~~~~~~~~~-~~~~~~~l~~~~~~~~~il~V~Rld~~KGi~~~l~A~~~~l~~~p~~~~~v~lv~~~~~ 298 (456)
T d1uqta_ 220 TEVYPIGIEPKEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPT 298 (456)
T ss_dssp EEECCCCCCHHHHHHHHHSC-CCHHHHHHHHHTTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCB
T ss_pred eeeecCcccchhhhhhcccH-HHHHHHHHHHhcCCCeEEEEeCCCchhhchHHHHHHHHHHHHhCccccccEEEEEEcCC
Confidence 99999999999998765444 34566788899999999999999999999999999999999999999999999999999
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCC
Q 004314 381 ARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVS 460 (761)
Q Consensus 381 ~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~ 460 (761)
++++.++|.+++.++.++|++||++|+..+|.|++++.+.++++++.++|+.||||++||++||||||++||||||.+
T Consensus 299 ~~~~~~~~~~~~~ev~~lv~~in~~~~~~~~~~~v~~~~~~~~~~l~a~~~~Adv~v~~s~~EG~~lv~~Ea~a~~~p-- 376 (456)
T d1uqta_ 299 SRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP-- 376 (456)
T ss_dssp CSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCT--
T ss_pred cccchHHHHHHHHHHHHHHHHHHhhhccCCCCceeeccCCcCHHHHhHHHhhhceeecCCccCCCCcHHHHHHHhCCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999973
Q ss_pred CCCCCCCCCCCCCceEEEcCCCCCcccccCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHH
Q 004314 461 GSESSSESSAPKKSMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSF 540 (761)
Q Consensus 461 ~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~ 540 (761)
.++|+||+|+++|+++++.+|++|||||++++|+||.+||+||++||++|+++++++|.+||+.+|+++|
T Consensus 377 ----------~~~g~lIlS~~~G~~~~l~~g~lVnP~d~~~~A~ai~~aL~~~~~er~~~~~~~~~~v~~~~~~~W~~~f 446 (456)
T d1uqta_ 377 ----------ANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECF 446 (456)
T ss_dssp ----------TSCCEEEEETTBGGGGTCTTSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred ----------CCCCcEEEeCCCCCHHHhCCeEEECcCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCHHHHHHHH
Confidence 3568999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 004314 541 FQDMERT 547 (761)
Q Consensus 541 l~~l~~~ 547 (761)
|.+|+++
T Consensus 447 l~~l~~~ 453 (456)
T d1uqta_ 447 ISDLKQI 453 (456)
T ss_dssp HHHHHHS
T ss_pred HHHHHhh
Confidence 9999874
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.92 E-value=1.4e-23 Score=230.25 Aligned_cols=289 Identities=16% Similarity=0.175 Sum_probs=212.5
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCch---hHHhc--C----c--chHHHHHHhhhcCEEeeeCHHHHH
Q 004314 201 DDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSS---EIYRT--L----P--VREEILKALLNADLIGFHTFDYAR 269 (761)
Q Consensus 201 ~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~---e~fr~--l----p--~r~~il~~ll~~DligF~t~~~~~ 269 (761)
.|+|++|+++..+++.++++. .++++.+++|..++.. ..+.. + . ...........+|.+...+...+.
T Consensus 121 pDiIh~~~~~~~~~~~~~~~~-~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~ 199 (437)
T d2bisa1 121 PDVVHFHDWHTVFAGALIKKY-FKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLI 199 (437)
T ss_dssp CSEEEEETGGGHHHHHHHHHH-HCCCEEEEESSCCCCCEEHHHHHHTTCGGGCCSSEECHHHHHHHHSSEEEESCHHHHH
T ss_pred CCEEEECChhhhhHhhhhhcc-ccCceeEEEeeccccccchhhhhhccchhhhhHHHHHHHHHHHHhhhhhcccchhhhh
Confidence 389999999988887777665 5789999999887631 11111 1 1 111223345678999888776654
Q ss_pred HHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHHc--CCCeEEEeecCccc
Q 004314 270 HFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF--EGKTVLLGVDDMDI 347 (761)
Q Consensus 270 ~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~--~~~~vil~VdRld~ 347 (761)
.... .+.. ...++.++|+|+|++.|.+....+........+++++ .++++|+++||++.
T Consensus 200 ~~~~----~~~~---------------~~~ki~vi~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~ 260 (437)
T d2bisa1 200 DEWG----FFRN---------------FEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDR 260 (437)
T ss_dssp HTHH----HHGG---------------GTTTEEECCCCCCTTTSCGGGCCSCHHHHHHHHHHHTTCCSCEEEEEESCBCS
T ss_pred hhhh----hhcc---------------ccCceEEEecccccccccccccchhhHHHHHhhhhhhhccCCceEEEeecccc
Confidence 4322 1111 1124678999999999987654444445555667766 46789999999975
Q ss_pred -cCChHHHHHHHHHHHHh--CCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHH
Q 004314 348 -FKGVDLKLLAMEHLLKQ--HPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLS 424 (761)
Q Consensus 348 -~KGi~~~l~A~~~ll~~--~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~ 424 (761)
.||+..+++|++.+..+ +|+ +.|+++|. ++.. .+..++.+... . ..++++.+.++.+
T Consensus 261 ~~Kg~~~ll~a~~~~~~~~~~~~----~~lvi~G~-----~~~~--~~~~~~~~~~~----~-----~~~~~~~~~~~~~ 320 (437)
T d2bisa1 261 GQKGVDVLLKAIEILSSKKEFQE----MRFIIIGK-----GDPE--LEGWARSLEEK----H-----GNVKVITEMLSRE 320 (437)
T ss_dssp SSSCHHHHHHHHHHHTTSGGGGG----EEEEEECC-----BCHH--HHHHHHHHHHT----C-----TTEEEECSCCCHH
T ss_pred cchhHHHHHhhhccccccccccc----ceeeeecc-----cccc--cccchhhhccc----c-----ccceeccccCcHH
Confidence 79999999999988653 344 44888773 3221 22222333221 1 1356678889999
Q ss_pred HHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc--CcEEECCCCHHHH
Q 004314 425 ERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS--GAIRVNPWNIEAT 502 (761)
Q Consensus 425 el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~al~VnP~d~~~~ 502 (761)
++..+|+.||++++||..||+|++++|||+||. |+|+|+.+|+.+.+. .|++|+|.|++++
T Consensus 321 ~~~~~~~~adi~v~~s~~e~~~~~~~Eama~G~-----------------Pvi~~~~g~~~e~i~~~~G~~~~~~d~~~l 383 (437)
T d2bisa1 321 FVRELYGSVDFVIIPSYFEPFGLVALEAMCLGA-----------------IPIASAVGGLRDIITNETGILVKAGDPGEL 383 (437)
T ss_dssp HHHHHHTTCSEEEECCSCCSSCHHHHHHHTTTC-----------------EEEEESCTTHHHHCCTTTCEEECTTCHHHH
T ss_pred HHHHHHhhhccccccccccccchHHHHHHHCCC-----------------CEEEeCCCCcHHhEECCcEEEECCCCHHHH
Confidence 999999999999999999999999999999976 999999999888774 4899999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHHHHHH
Q 004314 503 AEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMER 546 (761)
Q Consensus 503 A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l~~ 546 (761)
|++|.++|++.++.++...++.+++++++++..+++++++-.++
T Consensus 384 a~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~iY~~ 427 (437)
T d2bisa1 384 ANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTG 427 (437)
T ss_dssp HHHHHHHHTTTTSCTHHHHHHHHHHHHHSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 99999999877666777777788888899999999988876554
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.91 E-value=1e-23 Score=236.61 Aligned_cols=318 Identities=13% Similarity=0.174 Sum_probs=211.5
Q ss_pred HhHHHHHHHHHHHHHHHHHHhCC-CCCEEEEeCCccchHHHHHHH-hcCCCeEEEEEecCCC----chhHHhcCc--c--
Q 004314 177 SLWEAYVSANKIFSQRVIEVINP-EDDYVWIHDYHLMVLPTFLRR-RFTRLRMGFFLHSPFP----SSEIYRTLP--V-- 246 (761)
Q Consensus 177 ~~w~~Y~~vN~~fa~~i~~~~~~-~~DiVwvhDyhl~llp~~lr~-~~~~~~ig~flH~PfP----~~e~fr~lp--~-- 246 (761)
..|..|...++.+++.+.+.... .-|+||+||+|..+.+.+++. +.+++++.+++|.... ....+..+. +
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~pDIvH~h~~~~~l~~~~~~~~~~~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~~~ 185 (477)
T d1rzua_ 106 DNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHA 185 (477)
T ss_dssp THHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGG
T ss_pred ccHHHHHHHHHHHHhhhhhcccCCCCCEEEecchhHHHHHHHHHHhhCCCCCEEEEEecccccccCCHHHHHHhhcchhh
Confidence 35888888888887665554321 129999999999999888874 4567999999996521 011121111 0
Q ss_pred -----------hHHHHHHhhhcCEEeeeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchh
Q 004314 247 -----------REEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIES 315 (761)
Q Consensus 247 -----------r~~il~~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~ 315 (761)
..-+-.++..+|.+-..+..|++..+.. ..+...... ...+..++.++|+|||.+.|.+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~ad~~~~vs~~~~~~~~~~---~~~~~~~~~-------~~~~~~~~~vi~ngv~~~~~~p 255 (477)
T d1rzua_ 186 FGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTA---EFGMGLEGV-------IGSRAHVLHGIVNGIDADVWNP 255 (477)
T ss_dssp SSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHTTSH---HHHTTCHHH-------HHTTGGGEEECCCCBCTTTSCT
T ss_pred cccccccccchhHHHHHHHHhhhhhhhccHHHHHHHHHH---hcCcchhhh-------hhhccccEEEEECCcchhhccc
Confidence 0122345678999999999888776431 111100000 0112235778999999988865
Q ss_pred hhcc-----------chHHHHHHHHHHHc----CCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecC
Q 004314 316 VLRL-----------ADKDWRVQELKQQF----EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANP 380 (761)
Q Consensus 316 ~~~~-----------~~~~~~~~~lr~~~----~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p 380 (761)
.... .......+.++.++ +++++|+++||+++.||+..+++|++++++.++. |+++|.
T Consensus 256 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~~~~------l~~~G~- 328 (477)
T d1rzua_ 256 ATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGR------LVVLGA- 328 (477)
T ss_dssp TTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHHTTCE------EEEEEC-
T ss_pred cccccccccchhhhHHHhhhhHHHHHHhcccccCCccEEEEEeeeeecCCcHHHHHHHHHHHhhCCe------EEEEec-
Confidence 2110 01122233444444 3567999999999999999999999999886542 555663
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCC
Q 004314 381 ARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVS 460 (761)
Q Consensus 381 ~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~ 460 (761)
|+. ....++.++..+.+. .|.+. +..+.+++..+|+.||+||+||.+||||+|++|||+||.
T Consensus 329 ----G~~--~~~~~~~~~~~~~~~--------~v~~~-~~~~~~~~~~~~~~aD~~v~PS~~E~fglv~lEAma~G~--- 390 (477)
T d1rzua_ 329 ----GDV--ALEGALLAAASRHHG--------RVGVA-IGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGC--- 390 (477)
T ss_dssp ----BCH--HHHHHHHHHHHHTTT--------TEEEE-ESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTC---
T ss_pred ----CCc--hHHHHHHHHHhhcCC--------eEEEE-cccChhHHHHHHHhCccccCCccccCCCHHHHHHHHcCC---
Confidence 222 223344445444432 35554 467888999999999999999999999999999999976
Q ss_pred CCCCCCCCCCCCCceEEEcCCCCCccccc------------CcEEECCCCHHHHHHHHHHHHcC--CHHHHHHHHHHHhh
Q 004314 461 GSESSSESSAPKKSMLVVSEFIGCSPSLS------------GAIRVNPWNIEATAEAMHEAIQM--NEAEKQLRHEKHYR 526 (761)
Q Consensus 461 ~~~~~~~~~~~~~g~lV~Se~~G~~~~l~------------~al~VnP~d~~~~A~ai~~aL~m--~~~er~~r~~~~~~ 526 (761)
|+|+|+.+|..+.+. .|++|+|.|++++|++|.++|++ .++.++++.++..
T Consensus 391 --------------PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~a~- 455 (477)
T d1rzua_ 391 --------------IPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGM- 455 (477)
T ss_dssp --------------EEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHH-
T ss_pred --------------CEEEcCCCCCcceeecCCccccccCCCceEEeCCCCHHHHHHHHHHHHhhhCCHHHHHHHHHHHH-
Confidence 999999999998772 47999999999999999999873 2223333222221
Q ss_pred HHhhCCHHHHHHHHHHHHH
Q 004314 527 YVSTHDVAYWARSFFQDME 545 (761)
Q Consensus 527 ~v~~~~~~~Wa~~~l~~l~ 545 (761)
-+.+++..-++++++--+
T Consensus 456 -~~~fsw~~~a~~~~~lY~ 473 (477)
T d1rzua_ 456 -KSDVSWEKSAGLYAALYS 473 (477)
T ss_dssp -TCCCBHHHHHHHHHHHHH
T ss_pred -HhhCCHHHHHHHHHHHHH
Confidence 134777777776655433
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.86 E-value=2.2e-21 Score=191.80 Aligned_cols=190 Identities=16% Similarity=0.179 Sum_probs=148.5
Q ss_pred ccCcccchhhhccchHHHHHHHHHHHc--CCCeEEEeecCcc-ccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCC
Q 004314 307 GIHMGQIESVLRLADKDWRVQELKQQF--EGKTVLLGVDDMD-IFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARG 383 (761)
Q Consensus 307 GId~~~f~~~~~~~~~~~~~~~lr~~~--~~~~vil~VdRld-~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~ 383 (761)
|||++.|.+........++.+.++++| +++++|++|||++ +.||+..+++|++.|.++.+. .++.|+++|..
T Consensus 1 gid~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~--~~~~l~i~G~g--- 75 (196)
T d2bfwa1 1 GIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEF--QEMRFIIIGKG--- 75 (196)
T ss_dssp CCCTTTSSGGGSCSCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGG--GGEEEEEECCB---
T ss_pred CcChhhcCCCCCCchhHHHHHHHHHHhCCCCCCEEEEEcCCCccccCHHHHHHHHHhhhcccCC--CCeEEEEEeec---
Confidence 899999987765555667778888888 6889999999997 589999999999998654321 13558887731
Q ss_pred CchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCC
Q 004314 384 RGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSE 463 (761)
Q Consensus 384 ~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~ 463 (761)
.+.+ +..++.+...+ ..++++.+.++.+++..+|+.||++|+||..||+|++.+|||+||.
T Consensus 76 -~~~~---~~~~~~~~~~~---------~~~~~~~~~~~~~~l~~~~~~~di~v~ps~~e~~~~~~~Eam~~G~------ 136 (196)
T d2bfwa1 76 -DPEL---EGWARSLEEKH---------GNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGA------ 136 (196)
T ss_dssp -CHHH---HHHHHHHHHHC---------TTEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTC------
T ss_pred -ccch---hhhhhhhhhcc---------ceeEEeeeccccccchhccccccccccccccccccccchhhhhcCc------
Confidence 1233 33333333332 1366678899999999999999999999999999999999999976
Q ss_pred CCCCCCCCCCceEEEcCCCCCccccc--CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhC
Q 004314 464 SSSESSAPKKSMLVVSEFIGCSPSLS--GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTH 531 (761)
Q Consensus 464 ~~~~~~~~~~g~lV~Se~~G~~~~l~--~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~ 531 (761)
|+|+|..+|..+.+. .|++++|.|+++++++|.++|.+..+.+....+..++++.++
T Consensus 137 -----------pvI~~~~~~~~e~i~~~~g~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~~a~~f 195 (196)
T d2bfwa1 137 -----------IPIASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSF 195 (196)
T ss_dssp -----------EEEEESCHHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHT
T ss_pred -----------eeeecCCCccceeecCCceeeECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhC
Confidence 999999888887774 489999999999999999999988766555555566666544
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=99.82 E-value=1.6e-20 Score=199.21 Aligned_cols=201 Identities=16% Similarity=0.193 Sum_probs=152.9
Q ss_pred EEEEeccccCcccchhhhccchHHHHHHHHHHHc---CCCeEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEE
Q 004314 300 GIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQ 376 (761)
Q Consensus 300 ~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 376 (761)
++.++|+|||++.+.+... +. ....+|+.+ .+++++++++|+.+.||+..+++|++++.+++|+.. ++.
T Consensus 160 ~i~vi~~gv~~~~~~~~~~-~~---~~~~~r~~~~~~~~~~~i~~~gr~~~~Kg~~~li~a~~~l~~~~~~~~----~~i 231 (370)
T d2iw1a1 160 RFQILPPGIYPDRKYSEQI-PN---SREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNT----LLF 231 (370)
T ss_dssp GEEECCCCCCGGGSGGGSC-TT---HHHHHHHHTTCCTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTE----EEE
T ss_pred eEEEEEeecccccccccCc-hh---hhhhhhhccCCCccceEEEEEeccccccchhhhcccccccccccccce----eee
Confidence 4678999999988765322 11 223455555 478999999999999999999999999988777643 555
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeee
Q 004314 377 IANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCR 456 (761)
Q Consensus 377 i~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~ 456 (761)
+++.. .. +++++++++++.. ..++++. + .+++..+|+.||++|+||..|||+++++|||+||
T Consensus 232 i~g~~-----~~----~~~~~~~~~~~~~------~~v~~~g-~--~~~~~~~~~~adv~v~ps~~E~~~~~~~EAma~G 293 (370)
T d2iw1a1 232 VVGQD-----KP----RKFEALAEKLGVR------SNVHFFS-G--RNDVSELMAAADLLLHPAYQEAAGIVLLEAITAG 293 (370)
T ss_dssp EESSS-----CC----HHHHHHHHHHTCG------GGEEEES-C--CSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHT
T ss_pred ccccc-----cc----ccccccccccccc------ccccccc-c--ccccccccccccccccccccccccceeeecccCC
Confidence 55321 11 2334555555432 2466654 3 4679999999999999999999999999999997
Q ss_pred cCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---Cc-EEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCC
Q 004314 457 QGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GA-IRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHD 532 (761)
Q Consensus 457 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~a-l~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~ 532 (761)
. |+|+|+.+|..+.+. .| ++++|.|++++|++|.++|+++ +.++.+.++.++++++++
T Consensus 294 ~-----------------PvI~s~~~g~~e~i~~~~~G~l~~~~~d~~~la~~i~~ll~d~-~~~~~~~~~ar~~~~~~~ 355 (370)
T d2iw1a1 294 L-----------------PVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQS-PLRMAWAENARHYADTQD 355 (370)
T ss_dssp C-----------------CEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHSC
T ss_pred e-----------------eEEEeCCCChHHHhcCCCceEEEcCCCCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHhC
Confidence 6 999999999998883 35 4558999999999999999964 355666677899999999
Q ss_pred HHHHHHHHHHHH
Q 004314 533 VAYWARSFFQDM 544 (761)
Q Consensus 533 ~~~Wa~~~l~~l 544 (761)
+..|.+...+-+
T Consensus 356 ~~~~~~~~~~ii 367 (370)
T d2iw1a1 356 LYSLPEKAADII 367 (370)
T ss_dssp CSCHHHHHHHHH
T ss_pred hhHHHHHHHHHH
Confidence 999988665544
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.68 E-value=8.3e-17 Score=160.08 Aligned_cols=159 Identities=18% Similarity=0.274 Sum_probs=125.8
Q ss_pred eEEecCCCcCCCCC--CCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCCCceEEccCCeEEeecCCcce
Q 004314 593 AILFDYDGTVMPQT--SINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEW 670 (761)
Q Consensus 593 lI~lDyDGTL~~~~--~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~~l~liaehGa~ir~~~~~~w 670 (761)
||+||+||||++.. +....++++++++|++|++ ++.|+|+|||+...++..+.. ...++++||+.+..++...+
T Consensus 2 Li~~DlDGTL~~~~~~~~~~~i~~~~~~~l~~l~~--~~~v~i~TGR~~~~l~~~~~~--~~~~~~~ng~~~~~~~~~~~ 77 (229)
T d1u02a_ 2 LIFLDYDGTLVPIIMNPEESYADAGLLSLISDLKE--RFDTYIVTGRSPEEISRFLPL--DINMICYHGACSKINGQIVY 77 (229)
T ss_dssp EEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHHHH--HSEEEEECSSCHHHHHHHSCS--SCEEEEGGGTEEEETTEEEE
T ss_pred EEEEEecCCCCCCCCChhhCCCCHHHHHHHHHHhh--CCCEEEEcCCCHHHhhhhcCc--cccEEecCeEEEecCCceee
Confidence 89999999999864 2456789999999999985 678999999999999988863 45799999999988754333
Q ss_pred eecCcCcCcchHHHHHHHHHHHhcCCCccEEEecCceEEEEcccCCCCCchHHHHHHHHHHHHHhcCCCcEEEeCCeEEE
Q 004314 671 QNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVE 750 (761)
Q Consensus 671 ~~~~~~~~~~w~~~v~~im~~y~~~t~Gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~~v~V~~G~~~vE 750 (761)
. ........|.+.+.+.+..+....+|.+.+.+...+.+++...++... .+..+.++..+.+..+.+.+|..++|
T Consensus 78 ~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~~~~~~id 152 (229)
T d1u02a_ 78 N-NGSDRFLGVFDRIYEDTRSWVSDFPGLRIYRKNLAVLYHLGLMGADMK----PKLRSRIEEIARIFGVETYYGKMIIE 152 (229)
T ss_dssp C-TTGGGGHHHHHHHHHHHTTHHHHSTTCEEEEETTEEEEECTTSCSTTH----HHHHHHHHHHHHHHTCEEEECSSEEE
T ss_pred e-cchhhhHHHHHHHHHHhHHhhcccCCceecccccceeeeehhhhhhhH----HHHHHHHHHHhhcCCeEEEeeceEEE
Confidence 2 222334556667777777777788999999999999999998765543 34455555555556788999999999
Q ss_pred EEeCCCCcCC
Q 004314 751 VKPQVYIQLR 760 (761)
Q Consensus 751 V~p~gvnKG~ 760 (761)
|.|+|+|||.
T Consensus 153 i~p~g~~Kg~ 162 (229)
T d1u02a_ 153 LRVPGVNKGS 162 (229)
T ss_dssp EECTTCCHHH
T ss_pred EecCCCCHHH
Confidence 9999999984
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.65 E-value=2.4e-16 Score=151.05 Aligned_cols=141 Identities=19% Similarity=0.242 Sum_probs=111.7
Q ss_pred eEEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEE
Q 004314 337 TVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVF 416 (761)
Q Consensus 337 ~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~ 416 (761)
..+|+|||+++.||+..+++|++++ |+.+ |+++|..+ +++..+.+.+++.+. . ...|+|
T Consensus 13 ~~~l~iGrl~~~K~~~~~i~a~~~l----~~~~----l~ivg~~~--~~~~~~~~~~~~~~~----~-------~~~v~~ 71 (166)
T d2f9fa1 13 DFWLSVNRIYPEKRIELQLEVFKKL----QDEK----LYIVGWFS--KGDHAERYARKIMKI----A-------PDNVKF 71 (166)
T ss_dssp SCEEEECCSSGGGTHHHHHHHHHHC----TTSC----EEEEBCCC--TTSTHHHHHHHHHHH----S-------CTTEEE
T ss_pred CEEEEEecCccccCHHHHHHHHHHh----cCCe----EEEEEecc--cccchhhhhhhhccc----c-------cCcEEE
Confidence 4588999999999999999999765 5544 77777433 234444444444332 1 124777
Q ss_pred EcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccccc---CcEE
Q 004314 417 IDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIR 493 (761)
Q Consensus 417 ~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~ 493 (761)
+ +.++.+++..+|+.||++++||..||+|++.+|||+||. |+|+|..+|+.+.+. .|+.
T Consensus 72 ~-g~~~~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~~~g~-----------------pvi~s~~~~~~e~i~~~~~g~~ 133 (166)
T d2f9fa1 72 L-GSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGK-----------------PVIAVNEGGFKETVINEKTGYL 133 (166)
T ss_dssp E-ESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTC-----------------CEEEESSHHHHHHCCBTTTEEE
T ss_pred e-ecccccccccccccccccccccccccccccccccccccc-----------------cceeecCCcceeeecCCccccc
Confidence 6 689999999999999999999999999999999999976 999999999988773 3676
Q ss_pred ECCCCHHHHHHHHHHHHcCCHHHH
Q 004314 494 VNPWNIEATAEAMHEAIQMNEAEK 517 (761)
Q Consensus 494 VnP~d~~~~A~ai~~aL~m~~~er 517 (761)
+++ |+++++++|.+++++++..+
T Consensus 134 ~~~-d~~~~~~~i~~l~~~~~~~~ 156 (166)
T d2f9fa1 134 VNA-DVNEIIDAMKKVSKNPDKFK 156 (166)
T ss_dssp ECS-CHHHHHHHHHHHHHCTTTTH
T ss_pred CCC-CHHHHHHHHHHHHhCHHHHH
Confidence 665 89999999999999876433
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.36 E-value=5.8e-12 Score=128.56 Aligned_cols=161 Identities=16% Similarity=0.158 Sum_probs=104.3
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC-CCceEEccCCeEEeecCCcc
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC-KKLGIAAEHGYFMRWSADEE 669 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~-~~l~liaehGa~ir~~~~~~ 669 (761)
.|+|++|+||||++.. ...++++++++|++|++ .+..|+++|||+...+.+++..+ ...+++++||+.+..++...
T Consensus 2 IKli~~DlDGTLl~~~--~~~~~~~~~~~l~~l~~-~gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~ 78 (269)
T d1rlma_ 2 VKVIVTDMDGTFLNDA--KTYNQPRFMAQYQELKK-RGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQL 78 (269)
T ss_dssp CCEEEECCCCCCSCTT--SCCCHHHHHHHHHHHHH-HTCEEEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEEETTEEE
T ss_pred EEEEEEeCCccCcCCC--CcCChHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHhCcccceEeeceeEEEECCcEE
Confidence 6899999999999732 34455789999999997 48999999999999999999876 34789999999999864322
Q ss_pred eeecCcCcCcchHHHHHHHHHHHhc---------CCCccEEEecCc--------------eEEEEcccCCCC-------C
Q 004314 670 WQNCGQSVDFGWIQIAEPVMKLYTE---------STDGSYIEIKES--------------ALVWHHRDADPG-------F 719 (761)
Q Consensus 670 w~~~~~~~~~~w~~~v~~im~~y~~---------~t~Gs~iE~k~~--------------~l~~hyr~ad~d-------~ 719 (761)
+... . ....+..++..+.. ..++.|+..... .....+...+.. .
T Consensus 79 ~~~~-----~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (269)
T d1rlma_ 79 FHGE-----L-TRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNL 152 (269)
T ss_dssp EECC-----C-CHHHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGCCSCEEEEEEEC
T ss_pred EEec-----c-chHHHHHHHHHHHhhcCceEEEEecCceEEecCCcHHHHHHHHhhcccccccccHhhhcchheEEEecC
Confidence 2211 1 12222222222221 223334432210 011112222111 1
Q ss_pred chHHHHHHHHHHHHHhcCCCcEEEeCCeEEEEEeCCCCcCC
Q 004314 720 GSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQVYIQLR 760 (761)
Q Consensus 720 ~~~qa~el~~~L~~~l~~~~v~V~~G~~~vEV~p~gvnKG~ 760 (761)
...++.++.+++...+......+.+|.+++||.|+++|||.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~p~~~sK~~ 193 (269)
T d1rlma_ 153 PDEQIPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKAN 193 (269)
T ss_dssp CGGGHHHHHHHHHHHTTTSSEEEECSTTEEEEECTTCSHHH
T ss_pred CHHHHHHHHHHHHHHhhcceEEEEEcCceEEEecCchHHHH
Confidence 24567778888877665443455679999999999999984
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.27 E-value=3.5e-12 Score=130.52 Aligned_cols=159 Identities=19% Similarity=0.173 Sum_probs=99.0
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC--CCceEEccCCeEEeecCCc
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC--KKLGIAAEHGYFMRWSADE 668 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~--~~l~liaehGa~ir~~~~~ 668 (761)
.|+|++|+||||++ .+..++++++++|++|++ +..++++|||++..+.+.+... .+..+|++||+.+..+++.
T Consensus 2 ~Kli~~DlDGTL~~---~~~~i~~~~~~al~~l~~--~~~~~i~TGR~~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~ 76 (267)
T d1nf2a_ 2 YRVFVFDLDGTLLN---DNLEISEKDRRNIEKLSR--KCYVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEEG 76 (267)
T ss_dssp BCEEEEECCCCCSC---TTSCCCHHHHHHHHHHTT--TSEEEEECSSCHHHHHHHHHHHSSSCCCEEEGGGTEEEETTTE
T ss_pred eEEEEEeCCccccC---CcCccCHHHHHHHHHHHc--CCEEEEECCCChHHHHHHHHHhcccCCceeccCCeEEEecccc
Confidence 47999999999998 456688999999999985 5689999999998877777542 3456899999999887543
Q ss_pred ceeecCcCcCcchHHHHHHHHHHHhcC--------CCccEEEecCceEEEEcccC------CCC----------------
Q 004314 669 EWQNCGQSVDFGWIQIAEPVMKLYTES--------TDGSYIEIKESALVWHHRDA------DPG---------------- 718 (761)
Q Consensus 669 ~w~~~~~~~~~~w~~~v~~im~~y~~~--------t~Gs~iE~k~~~l~~hyr~a------d~d---------------- 718 (761)
.... ...+. +.+..+.+...+. .++.+.+.....+..+.+.. .+.
T Consensus 77 ~i~~--~~i~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 151 (267)
T d1nf2a_ 77 VILN--EKIPP---EVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNLSELVSKMGTTKLLLI 151 (267)
T ss_dssp EEEE--CCBCH---HHHHHHHHHHGGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTHHHHHHHHCBSEEEEE
T ss_pred cccc--cCCCH---HHHHHHHHHHHhcCceEEEeeCceEEecCCcHHHHHHHHhcCCCceecCcHHHHhhhccceEEEEe
Confidence 3221 12222 2333333332221 11222221110000000000 000
Q ss_pred CchHHHHHHHHHHHHHhcCCCcE-EEeCCeEEEEEeCCCCcCC
Q 004314 719 FGSSQAKELLDHLESVLANEPAA-VKSGQFIVEVKPQVYIQLR 760 (761)
Q Consensus 719 ~~~~qa~el~~~L~~~l~~~~v~-V~~G~~~vEV~p~gvnKG~ 760 (761)
-...+.+++.+.+.+.+.+. +. +.+|..++||.|+|+|||.
T Consensus 152 ~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~di~~~~~~K~~ 193 (267)
T d1nf2a_ 152 DTPERLDELKEILSERFKDV-VKVFKSFPTYLEIVPKNVDKGK 193 (267)
T ss_dssp CCHHHHHHHHHHHHHHHTTT-SEEEEEETTEEEEECTTCCHHH
T ss_pred ccHHHHHHHHHHHHHhhCCc-EEEEEeecceeeecCCCCchhH
Confidence 01446667777777766543 44 4569999999999999984
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.27 E-value=2.7e-12 Score=131.12 Aligned_cols=76 Identities=20% Similarity=0.194 Sum_probs=63.5
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC----CCceEEccCCeEEeec
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC----KKLGIAAEHGYFMRWS 665 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~----~~l~liaehGa~ir~~ 665 (761)
+.|||++|+||||++ .+..++++++++|++|.+ .+..|+++|||++..+.+++..+ |..+++++||+.+..+
T Consensus 3 ~iKli~~DlDGTL~~---~~~~i~~~~~~al~~L~~-~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~ 78 (271)
T d1rkqa_ 3 AIKLIAIDMDGTLLL---PDHTISPAVKNAIAAARA-RGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKA 78 (271)
T ss_dssp CCCEEEECCCCCCSC---TTSCCCHHHHHHHHHHHH-TTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEET
T ss_pred CeeEEEEeCCccccC---CCCccCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEecc
Confidence 479999999999998 345678999999999996 58999999999999998887653 4566999999999865
Q ss_pred CCcc
Q 004314 666 ADEE 669 (761)
Q Consensus 666 ~~~~ 669 (761)
.+..
T Consensus 79 ~~~~ 82 (271)
T d1rkqa_ 79 ADGS 82 (271)
T ss_dssp TTCC
T ss_pred CCCe
Confidence 4433
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.20 E-value=2.2e-11 Score=120.26 Aligned_cols=154 Identities=18% Similarity=0.209 Sum_probs=99.7
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC-CCceEEccCCeEEeecCCc
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC-KKLGIAAEHGYFMRWSADE 668 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~-~~l~liaehGa~ir~~~~~ 668 (761)
|.|+|++|+||||++ ....++++++++|++|.+ .+..|+++|||+...++..+..+ .+..++++||+.+......
T Consensus 1 kiK~i~~D~DGTL~~---~~~~i~~~~~~~l~~l~~-~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~ 76 (230)
T d1wr8a_ 1 KIKAISIDIDGTITY---PNRMIHEKALEAIRRAES-LGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKR 76 (230)
T ss_dssp CCCEEEEESTTTTBC---TTSCBCHHHHHHHHHHHH-TTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEE
T ss_pred CceEEEEecCCCCcC---CCCccCHHHHHHHHHHHh-CCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccc
Confidence 578999999999997 456688999999999986 58999999999999998887643 2356899999999887433
Q ss_pred ceeecCcCcCcchHHHHHHHHHHHhcCCCccEEEecCceEEEEcccCCCCCchHHHHHHHHHHHHHhcCCCcEEEeCCeE
Q 004314 669 EWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFI 748 (761)
Q Consensus 669 ~w~~~~~~~~~~w~~~v~~im~~y~~~t~Gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~~v~V~~G~~~ 748 (761)
.+.. .....| .....+...+......-....+...+.+. .. .......+++.+++ ...+....+...
T Consensus 77 ~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 143 (230)
T d1wr8a_ 77 IFLA---SMDEEW-ILWNEIRKRFPNARTSYTMPDRRAGLVIM-RE---TINVETVREIINEL-----NLNLVAVDSGFA 143 (230)
T ss_dssp EESC---CCSHHH-HHHHHHHHHCTTCCBCTTGGGCSSCEEEC-TT---TSCHHHHHHHHHHT-----TCSCEEEECSSC
T ss_pred cccc---cccHHH-HHHHHHHHhcccccceeecccceeeEEEe-cc---cccHHHHHHHHHHh-----ccceEEeeCCcE
Confidence 3221 122222 22334444444322222233333444332 21 11222334444333 234667788899
Q ss_pred EEEEeCCCCcCC
Q 004314 749 VEVKPQVYIQLR 760 (761)
Q Consensus 749 vEV~p~gvnKG~ 760 (761)
+||.|.+++|+.
T Consensus 144 iei~~~~~~K~~ 155 (230)
T d1wr8a_ 144 IHVKKPWINKGS 155 (230)
T ss_dssp EEEECTTCCHHH
T ss_pred EEEeeCCcCcch
Confidence 999999999974
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.17 E-value=1.9e-10 Score=117.85 Aligned_cols=75 Identities=19% Similarity=0.180 Sum_probs=64.1
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC-CCceEEccCCeEEeecCCcc
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC-KKLGIAAEHGYFMRWSADEE 669 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~-~~l~liaehGa~ir~~~~~~ 669 (761)
.|||++|+||||++. +..++++++++|++|.+ .+..|+++|||++..+.+.+..+ .+.+++++||+.+..+++..
T Consensus 1 iKli~~DlDGTLl~~---~~~i~~~~~~~l~~l~~-~Gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~nG~~i~~~~~~~ 76 (285)
T d1nrwa_ 1 MKLIAIDLDGTLLNS---KHQVSLENENALRQAQR-DGIEVVVSTGRAHFDVMSIFEPLGIKTWVISANGAVIHDPEGRL 76 (285)
T ss_dssp CCEEEEECCCCCSCT---TSCCCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHGGGTCCCEEEEGGGTEEECTTCCE
T ss_pred CeEEEEECCccccCC---CCccCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHhCCCcEEEecCceeEEecCCce
Confidence 489999999999983 45678999999999997 59999999999999999999875 34679999999998764433
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.16 E-value=2e-10 Score=113.72 Aligned_cols=166 Identities=15% Similarity=0.144 Sum_probs=97.0
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC---CCceEEccCCeEEeecC
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC---KKLGIAAEHGYFMRWSA 666 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~---~~l~liaehGa~ir~~~ 666 (761)
+.||++||+||||++ .++.++++++++|++|.+ +..++++|||....+.+.+... ....+++.+|+.+...+
T Consensus 2 ~~kl~~fDlDGTLl~---~~~~i~~~~~~al~~l~~--~g~~~i~Tgr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (243)
T d2amya1 2 GPALCLFDVDGTLTA---PRQKITKEMDDFLQKLRQ--KIKIGVVGGSDFEKVQEQLGNDVVEKYDYVFPENGLVAYKDG 76 (243)
T ss_dssp CSEEEEEESBTTTBC---TTSCCCHHHHHHHHHHTT--TSEEEEECSSCHHHHHHHHCTTHHHHCSEEESGGGTEEEETT
T ss_pred CCEEEEEcCcCCeeC---CCCcCCHHHHHHHHHHHc--CCCEEEEcCCChHHhHHHHhhhccccceEEecCcEEEEecCC
Confidence 468999999999998 467789999999999975 5578999999999888777643 22556667787776665
Q ss_pred CcceeecCcC-cCcc-hHHHHHHHHHHHhc----CCCccEEEecCceEEEEcccCCCCCc-----------hHHHHHHHH
Q 004314 667 DEEWQNCGQS-VDFG-WIQIAEPVMKLYTE----STDGSYIEIKESALVWHHRDADPGFG-----------SSQAKELLD 729 (761)
Q Consensus 667 ~~~w~~~~~~-~~~~-w~~~v~~im~~y~~----~t~Gs~iE~k~~~l~~hyr~ad~d~~-----------~~qa~el~~ 729 (761)
+..+...... .... +..........+.. .......+.......+.......... .....+..+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (243)
T d2amya1 77 KLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQKFVA 156 (243)
T ss_dssp EEEEECCHHHHHCHHHHHHHHHHHHHHHHHCCCSCCCSCSEEEETTEEEECSSCTTCCHHHHHHHHHHHHHHCHHHHHHH
T ss_pred ccceecchhHHHHHHHHHHHHhhhhhhheeccccccccchhhhhhhhhcccccccccchhhhhhhhhhhcchhhhHHHHH
Confidence 4444321110 0000 11111111111111 11222233333344444333222210 122334455
Q ss_pred HHHHHhcCCCcEE-EeCCeEEEEEeCCCCcCC
Q 004314 730 HLESVLANEPAAV-KSGQFIVEVKPQVYIQLR 760 (761)
Q Consensus 730 ~L~~~l~~~~v~V-~~G~~~vEV~p~gvnKG~ 760 (761)
.+.+.+....+.+ .++..++||.|+|+|||.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~lei~~~~vsKg~ 188 (243)
T d2amya1 157 DLRKEFAGKGLTFSIGGQISFDVFPDGWDKRY 188 (243)
T ss_dssp HHHHHTTTSCEEEEEETTTEEEEEETTCSGGG
T ss_pred HHHHHhcccceEEEecCCccceeeccccCHHH
Confidence 5655555555554 568999999999999995
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.15 E-value=5.5e-11 Score=121.40 Aligned_cols=171 Identities=13% Similarity=0.097 Sum_probs=105.8
Q ss_pred HHHHhccceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC-------CCceEEc
Q 004314 584 SAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC-------KKLGIAA 656 (761)
Q Consensus 584 ~~y~~s~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~-------~~l~lia 656 (761)
++++.+..|+|++|+||||+.. ....++++++++|++|.+ .|..|+++|||++..+.+.+..+ .....++
T Consensus 3 ~~~~~~~ikli~~DlDGTLl~~--~~~~i~~~~~~al~~l~~-~Gi~v~i~TGR~~~~~~~~~~~l~~~~~~~~~~~~i~ 79 (283)
T d2b30a1 3 EALKGADIKLLLIDFDGTLFVD--KDIKVPSENIDAIKEAIE-KGYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVY 79 (283)
T ss_dssp HHTTTCCCCEEEEETBTTTBCC--TTTCSCHHHHHHHHHHHH-HTCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEEE
T ss_pred ccCcccCccEEEEECCCCCcCC--CCCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHhCcccccccCCceEE
Confidence 5778899999999999999853 245688999999999986 59999999999999988877632 2345788
Q ss_pred cCCeEEeecCCcceeecCcCcCcchHHHHHHHHHHHhcCCCccEEEecCceEEE---------------------EcccC
Q 004314 657 EHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVW---------------------HHRDA 715 (761)
Q Consensus 657 ehGa~ir~~~~~~w~~~~~~~~~~w~~~v~~im~~y~~~t~Gs~iE~k~~~l~~---------------------hyr~a 715 (761)
.||+.+....+..... ...+..+...+.+.+..+. .....++...+....- ...+.
T Consensus 80 ~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (283)
T d2b30a1 80 INGTIVYDQIGYTLLD--ETIETDVYAELISYLVEKN-LVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIRHNEM 156 (283)
T ss_dssp GGGTEEECTTCCEEEE--CCCCHHHHHHHHHHHHHTT-CGGGEEEEETTEEEEETTCTTTTHHHHHHSCCCCEEECHHHH
T ss_pred EeeeEEEcCCCcEeee--cccCHHHHHHHHHHHHhhc-ccceEEEEecceeEEeccchHHHHHHHHhhccccccccHHHH
Confidence 9999988764333221 1122222222222222211 1112222222211110 00000
Q ss_pred -C-CC-------CchHHHHHHHHHHHHHhcCCCcEEEeCCeEEEEEeCCCCcCC
Q 004314 716 -D-PG-------FGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQVYIQLR 760 (761)
Q Consensus 716 -d-~d-------~~~~qa~el~~~L~~~l~~~~v~V~~G~~~vEV~p~gvnKG~ 760 (761)
. .. ....+.+++.+++.+.+......+.++..++||.|+++|||.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~ 210 (283)
T d2b30a1 157 LKYRTMNKLMIVLDPSESKTVIGNLKQKFKNKLTIFTTYNGHAEVTKLGHDKYT 210 (283)
T ss_dssp TTCCCCSEEEECCCTTTHHHHHHHHHHHSTTTEEEEECTTSCEEEEETTCCHHH
T ss_pred hhcccceEEEEecCHHHHHHHHHHHHHHhcccceEEEecceeEeecCCcchhHH
Confidence 0 00 012456777888877766543445678999999999999974
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.07 E-value=4.2e-10 Score=114.25 Aligned_cols=78 Identities=15% Similarity=0.268 Sum_probs=61.1
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhcc---CCCCceEEccCCeEEeecCC
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS---PCKKLGIAAEHGYFMRWSAD 667 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~---~~~~l~liaehGa~ir~~~~ 667 (761)
.|+||+|+||||++. .....+++++++|++|.+ .+..|+++|||++..+...+. .....++|++||+.++.+++
T Consensus 1 ~k~if~DlDGTL~~~--~~~~i~~~~~~al~~l~~-~gi~v~~~TGR~~~~~~~l~~~~~~~~~~~~I~~nGa~i~~~~~ 77 (260)
T d2rbka1 1 TKALFFDIDGTLVSF--ETHRIPSSTIEALEAAHA-KGLKIFIATGRPKAIINNLSELQDRNLIDGYITMNGAYCFVGEE 77 (260)
T ss_dssp CCEEEECSBTTTBCT--TTSSCCHHHHHHHHHHHH-TTCEEEEECSSCGGGCCSCHHHHHTTCCCEEEEGGGTEEEETTE
T ss_pred CeEEEEECCCCCcCC--CCCCCCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHHhcCCCCceEecCCcccccCcc
Confidence 379999999999974 245678999999999996 589999999999887765432 22335789999999998754
Q ss_pred ccee
Q 004314 668 EEWQ 671 (761)
Q Consensus 668 ~~w~ 671 (761)
..|.
T Consensus 78 ~i~~ 81 (260)
T d2rbka1 78 VIYK 81 (260)
T ss_dssp EEEE
T ss_pred cccc
Confidence 3343
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.99 E-value=1.3e-10 Score=116.85 Aligned_cols=159 Identities=12% Similarity=0.043 Sum_probs=90.9
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC--C-CceEEccCCeEEeecC
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC--K-KLGIAAEHGYFMRWSA 666 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~--~-~l~liaehGa~ir~~~ 666 (761)
++.||++|+||||++.. .. .+.+..+.++.+ ++..|+++|||++..+.+++..+ . .-.++++||+.+..+.
T Consensus 2 ~~~li~~DlDGTL~~~~---~~--~~~~~~~~~~~~-~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i~~~G~~i~~~~ 75 (244)
T d1s2oa1 2 RQLLLISDLDNTWVGDQ---QA--LEHLQEYLGDRR-GNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPE 75 (244)
T ss_dssp CSEEEEECTBTTTBSCH---HH--HHHHHHHHHTTG-GGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETT
T ss_pred CceEEEEECcccCCCCC---CC--HHHHHHHHHHHc-CCCEEEEECCCCHHHHHHHHHHcCCCCCceEEeccceEEEEcc
Confidence 46799999999999732 22 233444545443 58889999999999999988642 1 1358899999998874
Q ss_pred CcceeecCcCcCcch-HHHHHHHHHHHhcCCCccEEEecCceEEEEcccCCCCCchHHHHHHHHHHHHHhcCCCc-EEEe
Q 004314 667 DEEWQNCGQSVDFGW-IQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPA-AVKS 744 (761)
Q Consensus 667 ~~~w~~~~~~~~~~w-~~~v~~im~~y~~~t~Gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~~v-~V~~ 744 (761)
...+. ........| ++.+..+++.+.....++..+.....+.+++.....+ ...+++...+.... ..+ .+..
T Consensus 76 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~--~~~~~~~~ 149 (244)
T d1s2oa1 76 GLDQH-WADYLSEHWQRDILQAIADGFEALKPQSPLEQNPWKISYHLDPQACP---TVIDQLTEMLKETG--IPVQVIFS 149 (244)
T ss_dssp EECHH-HHHHHHTTCCHHHHHHHHHTCTTEEECCGGGCBTTBEEEEECTTSCT---HHHHHHHHHHHTSS--CCEEEEEE
T ss_pred CcchH-HHHHHHHHHhHHHHHHHHhhcccccccChhhhcceEEEEeccccccH---HHHHHHHHHHHhhc--ccceeeec
Confidence 32211 000111122 1233333333322222222333345677766544322 22334433333221 123 3456
Q ss_pred CCeEEEEEeCCCCcCC
Q 004314 745 GQFIVEVKPQVYIQLR 760 (761)
Q Consensus 745 G~~~vEV~p~gvnKG~ 760 (761)
+.+++||.|+++|||.
T Consensus 150 ~~~~~~i~~~~~~K~~ 165 (244)
T d1s2oa1 150 SGKDVDLLPQRSNKGN 165 (244)
T ss_dssp TTTEEEEEETTCSHHH
T ss_pred CCcEEEEEeCccchhH
Confidence 7889999999999985
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.98 E-value=1.2e-09 Score=107.70 Aligned_cols=162 Identities=15% Similarity=0.169 Sum_probs=88.7
Q ss_pred eeEE-ecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC-CC----CceEEccCCeEEeec
Q 004314 592 RAIL-FDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP-CK----KLGIAAEHGYFMRWS 665 (761)
Q Consensus 592 rlI~-lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~-~~----~l~liaehGa~ir~~ 665 (761)
|+|+ ||+||||++ .+..++++++++|++|.+ .+ .++++|||........+.. .+ ..++++.+|+.+...
T Consensus 1 k~i~lFDlDGTLl~---~~~~is~~~~~~i~~l~~-~g-~~~i~tgrr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 75 (244)
T d2fuea1 1 RVLCLFDVDGTLTP---ARQKIDPEVAAFLQKLRS-RV-QIGVVGGSDYCKIAEQLGDGDEVIEKFDYVFAENGTVQYKH 75 (244)
T ss_dssp CEEEEEESBTTTBS---TTSCCCHHHHHHHHHHTT-TS-EEEEECSSCHHHHHHHHSSTTTHHHHCSEEEEGGGTEEEET
T ss_pred CEEEEEccccCccC---CCCcCCHHHHHHHHHHHh-CC-CEEEEecCChhhhhhhhhhhhccccccceeecccceeeccC
Confidence 4666 599999998 456788999999999985 35 5677777776665554433 22 357889999999887
Q ss_pred CCcceeecCcCcCcchHHHHHHHH----HHHhc----CCCccEEEecCceEEEEcccCCCCCc-----------hHHHHH
Q 004314 666 ADEEWQNCGQSVDFGWIQIAEPVM----KLYTE----STDGSYIEIKESALVWHHRDADPGFG-----------SSQAKE 726 (761)
Q Consensus 666 ~~~~w~~~~~~~~~~w~~~v~~im----~~y~~----~t~Gs~iE~k~~~l~~hyr~ad~d~~-----------~~qa~e 726 (761)
++..|..... ............ ..... .....+.........++......... .....+
T Consensus 76 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (244)
T d2fuea1 76 GRLLSKQTIQ--NHLGEELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSELDKKEKIREK 153 (244)
T ss_dssp TEECCCCCHH--HHHCHHHHHHHHHHHHHHHHTCCCSCCCSCSEEECSSCEEECSSCTTCCHHHHHHHHHHHHHHCHHHH
T ss_pred Cccceeechh--HHHhhhHHHHHHhhhhhhhheecccccccchhhhhhhhhhccccccccchhhhhhhhhhccchhhHHH
Confidence 5444432111 000111111111 11111 12223333333344444333222211 111122
Q ss_pred HHHHHHHHhcCCCcEE-EeCCeEEEEEeCCCCcCC
Q 004314 727 LLDHLESVLANEPAAV-KSGQFIVEVKPQVYIQLR 760 (761)
Q Consensus 727 l~~~L~~~l~~~~v~V-~~G~~~vEV~p~gvnKG~ 760 (761)
..+.+..........+ .+|..++||.|+|+|||.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~lei~~~~vsKg~ 188 (244)
T d2fuea1 154 FVEALKTEFAGKGLRFSRGGMISFDVFPEGWDKRY 188 (244)
T ss_dssp HHHHHHHHTTTSCEEEECCSSSCEEEEETTCSTTH
T ss_pred HHHHHHHHhhccceeEeeccCccceecchhccHHH
Confidence 2333333333334444 458999999999999994
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.91 E-value=3.6e-10 Score=111.32 Aligned_cols=72 Identities=18% Similarity=0.205 Sum_probs=61.5
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC--CCceEEccCCeEEeecC
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC--KKLGIAAEHGYFMRWSA 666 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~--~~l~liaehGa~ir~~~ 666 (761)
..|||+|+||||++. +..++++++++|++|.+ .+..++++|||+...+.+.+..+ .+..++++||+.+....
T Consensus 4 ~~li~~DlDGTLl~~---~~~i~~~~~~al~~l~~-~Gi~~~i~TGR~~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~ 77 (232)
T d1xvia_ 4 PLLVFSDLDGTLLDS---HSYDWQPAAPWLTRLRE-ANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAE 77 (232)
T ss_dssp CEEEEEECTTTTSCS---SCCSCCTTHHHHHHHHH-TTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECCT
T ss_pred CEEEEEECCCCccCC---cCcCCHHHHHHHHHHHH-CCCEEEEEeCCChhhchhHHHHhccCCceEEccCCeEEEecC
Confidence 458999999999973 45678899999999986 69999999999999999988754 45779999999998754
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.88 E-value=1.1e-09 Score=108.57 Aligned_cols=150 Identities=11% Similarity=-0.042 Sum_probs=91.8
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC-CCceEEccCCeEEeecCCcc
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC-KKLGIAAEHGYFMRWSADEE 669 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~-~~l~liaehGa~ir~~~~~~ 669 (761)
.|+|++|+||||++ ....++++++++|++|.+ .+..|+++|||+...+......+ .+..++++||+.+..+....
T Consensus 3 iKli~~D~DGTL~~---~~~~i~~~~~~al~~l~~-~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~ 78 (225)
T d1l6ra_ 3 IRLAAIDVDGNLTD---RDRLISTKAIESIRSAEK-KGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSI 78 (225)
T ss_dssp CCEEEEEHHHHSBC---TTSCBCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCE
T ss_pred eEEEEEecCCCCcC---CCCcCCHHHHHHHHHHHH-CCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccE
Confidence 58999999999997 456678999999999996 58999999999998766654422 23568899999988775433
Q ss_pred eeecCcCcCcchHHHHHHHHHHHhcCCCccEEEecC-ceEEEEcccCCCCCchHHHHHHHHHHHHHhcCCCcEEEeCCeE
Q 004314 670 WQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKE-SALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFI 748 (761)
Q Consensus 670 w~~~~~~~~~~w~~~v~~im~~y~~~t~Gs~iE~k~-~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~~v~V~~G~~~ 748 (761)
+... .. +......+.......-..+.... ....+.+ +....+...+. ..+....+.+..+...
T Consensus 79 ~~~~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~----~~~~~~~~~i~~~~~~ 142 (225)
T d1l6ra_ 79 KKFF---SN----EGTNKFLEEMSKRTSMRSILTNRWREASTGF-----DIDPEDVDYVR----KEAESRGFVIFYSGYS 142 (225)
T ss_dssp EESS---CS----HHHHHHHHHHTTTSSCBCCGGGGGCSSSEEE-----BCCGGGHHHHH----HHHHTTTEEEEEETTE
T ss_pred EEec---Ch----HHHHHHHHHHHHhcCcceeecccceeeeecc-----ccCHHHHHHHH----HHHhhcCcEEEECCcE
Confidence 3311 11 22333333333221111110000 0001111 11122233333 3333456778888889
Q ss_pred EEEEeCCCCcCC
Q 004314 749 VEVKPQVYIQLR 760 (761)
Q Consensus 749 vEV~p~gvnKG~ 760 (761)
+||.|+++|||.
T Consensus 143 ~~i~~~~~~K~~ 154 (225)
T d1l6ra_ 143 WHLMNRGEDKAF 154 (225)
T ss_dssp EEEEETTCSHHH
T ss_pred EEecCCccchHH
Confidence 999999999984
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.61 E-value=1.5e-08 Score=100.46 Aligned_cols=71 Identities=18% Similarity=0.192 Sum_probs=59.6
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC-CCceEEccCCeEEeecCC
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC-KKLGIAAEHGYFMRWSAD 667 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~-~~l~liaehGa~ir~~~~ 667 (761)
.|+|++|+||||++.. .+++++++|++|.+ .|..|+++|||++..+..++..+ ....++++||+.+..+++
T Consensus 2 iKli~~DlDGTLl~~~-----~~~~~~~ai~~l~~-~G~~~~~aTGR~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~ 73 (243)
T d1wzca1 2 IRLIFLDIDKTLIPGY-----EPDPAKPIIEELKD-MGFEIIFNSSKTRAEQEYYRKELEVETPFISENGSAIFIPKG 73 (243)
T ss_dssp EEEEEECCBTTTBSSS-----CSGGGHHHHHHHHH-TTEEEEEECSSCHHHHHHHHHHHTCCSCEEETTTTEEEECTT
T ss_pred cEEEEEeCCCCCCCCC-----CCHHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHhcccccccccCCcEEEcCCC
Confidence 4899999999999732 24678999999996 59999999999999999988865 235699999999988754
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=97.27 E-value=0.00012 Score=66.40 Aligned_cols=51 Identities=25% Similarity=0.392 Sum_probs=42.1
Q ss_pred hccceeEEecCCCcCCCCCCC---------CCCCCHHHHHHHHHHHhcCCCeEEEEcCCCh
Q 004314 588 RSKSRAILFDYDGTVMPQTSI---------NKAPSQAVISIINTLCNDARNTVFVVSGRGR 639 (761)
Q Consensus 588 ~s~~rlI~lDyDGTL~~~~~~---------~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~ 639 (761)
.++.|.|+||+||||+...+. ...|-+.++++|+.|.+ .+..|+++|||+-
T Consensus 4 ~~kpk~vifDiDgTL~~~~~~~~~~~~~~~~~~~~p~v~~~l~~l~~-~G~~Iii~T~R~~ 63 (149)
T d1ltqa1 4 PGKPKAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMYAL-MGYQIVVVSGRES 63 (149)
T ss_dssp TTSCEEEEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHHHH-TTCEEEEEECSCC
T ss_pred CCCCcEEEEEcCCCcEeCCCCCcCCccccccCccCHHHHHHHHHHHh-ccCeEEEEecCcH
Confidence 467899999999999864321 24678999999999996 6999999999983
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=96.80 E-value=0.00063 Score=60.05 Aligned_cols=53 Identities=19% Similarity=0.322 Sum_probs=41.9
Q ss_pred EEecCCCcCCCCC-CCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhH---Hhhcc
Q 004314 594 ILFDYDGTVMPQT-SINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCL---GKWFS 647 (761)
Q Consensus 594 I~lDyDGTL~~~~-~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L---~~~f~ 647 (761)
|++|+||||.... .....|-+.+++.|++|.+ .|..+++.|+|+.... .+|+.
T Consensus 3 i~vDiDGTl~~~~~~~~~kPi~~~Ie~l~~L~~-~G~~IIi~TaR~~~~~~~t~~wL~ 59 (122)
T d2obba1 3 IAVDFDGTIVEHRYPRIGEEIPFAVETLKLLQQ-EKHRLILWSVREGELLDEAIEWCR 59 (122)
T ss_dssp EEECCBTTTBCSCTTSCCCBCTTHHHHHHHHHH-TTCEEEECCSCCHHHHHHHHHHHH
T ss_pred EEEEcCCCcCCCCCCccccccHHHHHHHHHHHH-CCCeEEEEecCCCcchHHHHHHHH
Confidence 7899999998643 2335688899999999996 6899999999987654 44554
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=96.73 E-value=0.0011 Score=58.46 Aligned_cols=46 Identities=20% Similarity=0.352 Sum_probs=39.1
Q ss_pred eeEEecCCCcCCCCCC---CCCCCCHHHHHHHHHHHhcCCCeEEEEcCCC
Q 004314 592 RAILFDYDGTVMPQTS---INKAPSQAVISIINTLCNDARNTVFVVSGRG 638 (761)
Q Consensus 592 rlI~lDyDGTL~~~~~---~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~ 638 (761)
|-|++|+||||+.... ....|-+.+++.|+.|.+ .|.+++|.|+|+
T Consensus 2 K~i~~DiDGTI~~~~~~~y~~~~P~~~~Ie~l~~l~~-~G~~Iii~TaR~ 50 (124)
T d1xpja_ 2 KKLIVDLDGTLTQANTSDYRNVLPRLDVIEQLREYHQ-LGFEIVISTARN 50 (124)
T ss_dssp CEEEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHHHH-TTCEEEEEECTT
T ss_pred CEEEEeCCCCeECCCCCCcCccCcCHHHHHHHHHHHH-CCCEEEEEecCC
Confidence 4689999999986442 356789999999999986 699999999996
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.69 E-value=0.0001 Score=69.57 Aligned_cols=57 Identities=18% Similarity=0.281 Sum_probs=41.7
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCCCCceEEccCCeEE
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFM 662 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~~~l~liaehGa~i 662 (761)
.|||+||+||||++. ++++++++.|..++++|||+.-...+++.. ++.++.++|..+
T Consensus 2 mkli~fDlDGTLl~e-------------~~~~~a~~~Gi~~~~~tgR~~~~~~~~~~~--~v~ll~~~~~~~ 58 (206)
T d1rkua_ 2 MEIACLDLEGVLVPE-------------IWIAFAEKTGIDALKATTRDIPDYDVLMKQ--RLRILDEHGLKL 58 (206)
T ss_dssp CEEEEEESBTTTBCC-------------HHHHHHHHHTCGGGGCCTTTCCCHHHHHHH--HHHHHHHTTCCH
T ss_pred cEEEEEcCccchHHH-------------HHHHHHHHcCCHHHHHHCCCCCCHHHHHHH--HHHHHHhCCCce
Confidence 489999999999861 356667667999999999998777777652 233445555443
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.99 E-value=0.0038 Score=57.28 Aligned_cols=51 Identities=20% Similarity=0.069 Sum_probs=38.6
Q ss_pred ceeEEecCCCcCCCCCCC---------------------CCCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhH
Q 004314 591 SRAILFDYDGTVMPQTSI---------------------NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCL 642 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~---------------------~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L 642 (761)
.|+|+||+||||.+.... .-.+-+.+.++|+.|.+ .+..++|+|+.+....
T Consensus 5 pK~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~pgv~e~L~~L~~-~G~~~~v~S~~~~~~~ 76 (164)
T d1u7pa_ 5 PKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQS-LGVPVAAASRTSEIQG 76 (164)
T ss_dssp CSEEEECCBTTTBSSCTTTTCCSCEEECTTSCEEETTCCEECCCTTHHHHHHHHHH-TTCCEEEEECCSCHHH
T ss_pred CCEEEEcCCCcccCCccccccCccHhHHhcchHhhhhccccccchHHHHHHHHHHH-CCCcEEEEeccccchh
Confidence 489999999999863210 01345789999999997 5899999998776543
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=95.43 E-value=0.0063 Score=55.94 Aligned_cols=47 Identities=19% Similarity=0.317 Sum_probs=36.7
Q ss_pred ceeEEecCCCcCCCCCCC--------CCCCCHHHHHHHHHHHhcCCCeEEEEcCCC
Q 004314 591 SRAILFDYDGTVMPQTSI--------NKAPSQAVISIINTLCNDARNTVFVVSGRG 638 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~--------~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~ 638 (761)
+|+||||.||||...... ...+-+.+.++|+.|.+ .+..++|+|..+
T Consensus 2 ~K~i~~D~DGtL~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~-~g~~l~i~TNq~ 56 (161)
T d2fpwa1 2 QKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKLQK-AGYKLVMITNQD 56 (161)
T ss_dssp CEEEEECCBTTTBCCC--CCCCCSGGGCCBCTTHHHHHHHHHH-TTEEEEEEEECT
T ss_pred CcEEEEeCCCCeEeeCCCCCccCCHHHceECccHHHHHHHHHH-cCCceeeecccc
Confidence 689999999999875421 12345789999999996 589999999754
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=95.41 E-value=0.0045 Score=60.78 Aligned_cols=51 Identities=18% Similarity=0.307 Sum_probs=37.5
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcC---CChhhHHhhc
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSG---RGRDCLGKWF 646 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSG---R~~~~L~~~f 646 (761)
-++++||+||||+.. .. +-+.+.++|++|.+ .+..++++|+ |+...+.+.+
T Consensus 2 yk~v~fDlDGTL~~~---~~-~i~~a~~~i~~l~~-~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 2 YQGYLIDLDGTIYLG---KE-PIPAGKRFVERLQE-KDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp CCEEEECCBTTTEET---TE-ECHHHHHHHHHHHH-TTCCEEEEECCCSSCHHHHHHHH
T ss_pred CCEEEEcCCCccEeC---CC-cCccHHHHHHHHHH-CCCCEEEEeCCCCCCHHHHHHHH
Confidence 478999999999873 22 33778999999986 4888999875 5555554443
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=95.22 E-value=0.0052 Score=60.27 Aligned_cols=53 Identities=11% Similarity=0.281 Sum_probs=39.7
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEc---CCChhhHHhhcc
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVS---GRGRDCLGKWFS 647 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvS---GR~~~~L~~~f~ 647 (761)
+.|+|+||+||||.... . +-+...++|+.|.+ .+..|+++| +|+.+.+.+.|.
T Consensus 2 ~ik~VifDlDGTL~~~~--~--~i~~a~e~i~~l~~-~g~~~~~~TN~~~~~~~~~~~~l~ 57 (250)
T d2c4na1 2 TIKNVICDIDGVLMHDN--V--AVPGAAEFLHGIMD-KGLPLVLLTNYPSQTGQDLANRFA 57 (250)
T ss_dssp CCCEEEEECBTTTEETT--E--ECTTHHHHHHHHHH-TTCCEEEEESCCSCCHHHHHHHHH
T ss_pred CCCEEEEECCCeeEECC--C--cCccHHHHHHHHHH-CCCcEEEEeCCCCCCHHHHHHHHh
Confidence 47899999999998732 2 22457888999885 588888886 677777766654
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=95.11 E-value=1.8 Score=44.10 Aligned_cols=250 Identities=15% Similarity=0.165 Sum_probs=146.5
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHHhcCCCeEEEEEecCCCchhHHhcCcchHHHHHHhh--hcCEEe
Q 004314 184 SANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALL--NADLIG 261 (761)
Q Consensus 184 ~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~fr~lp~r~~il~~ll--~~Dlig 261 (761)
.+-..+++ +++..+| |+|.||.=-.-.|+..+-....++||++. |-=..|.++. -|..+++.|... -||+.-
T Consensus 75 ~~~~~~~~-~l~~~kP--D~vlv~GDr~e~la~a~aa~~~~ipi~Hi-egG~rsg~~~--~~~~de~~R~~iskls~~hf 148 (373)
T d1v4va_ 75 RILPQAAR-ALKEMGA--DYVLVHGDTLTTFAVAWAAFLEGIPVGHV-EAGLRSGNLK--EPFPEEANRRLTDVLTDLDF 148 (373)
T ss_dssp HHHHHHHH-HHHHTTC--SEEEEESSCHHHHHHHHHHHHTTCCEEEE-TCCCCCSCTT--SSTTHHHHHHHHHHHCSEEE
T ss_pred HHHHHHhh-hhhhcCc--ccccccccCccchhHHHHHHHhhhhheee-cccccccccc--cCcchhhhhhhhccccceee
Confidence 33344444 4455577 89999986666777666666778999863 3212222222 234456555432 467777
Q ss_pred eeCHHHHHHHHHHHhhhcCceeeccCceeEEEEcCeEEEEEEeccccCcccchhhhccchHHHHHHHHHHH---c-CCCe
Q 004314 262 FHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQ---F-EGKT 337 (761)
Q Consensus 262 F~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~~~~~gr~~~i~v~P~GId~~~f~~~~~~~~~~~~~~~lr~~---~-~~~~ 337 (761)
--|..+.++.++ +|.+ ..+ +..-| -+++|- +.. ...+.+. . .++.
T Consensus 149 ~~t~~~~~~L~~-----~Ge~--~~~----I~~vG--------~p~~D~--i~~----------~~~~~~~~~~~~~~~~ 197 (373)
T d1v4va_ 149 APTPLAKANLLK-----EGKR--EEG----ILVTG--------QTGVDA--VLL----------AAKLGRLPEGLPEGPY 197 (373)
T ss_dssp ESSHHHHHHHHT-----TTCC--GGG----EEECC--------CHHHHH--HHH----------HHHHCCCCTTCCSSCE
T ss_pred ecchhhhhhhhh-----hccc--ccc----eeecc--------cchhhH--HHh----------hhhhcccccccccccc
Confidence 777777777664 2421 111 11111 123331 111 1111111 1 3567
Q ss_pred EEEeecCccccCChHHHHHHHHHHHHhCCCCcCceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEE
Q 004314 338 VLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFI 417 (761)
Q Consensus 338 vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~~~~pV~~~ 417 (761)
+++..-|....+.....+.++..+.+..++.. ++... +. . + ..+..+.+. +. ....+.++
T Consensus 198 ~lvt~hr~~n~~~~~~~~~~~~~~~~~~~~~~----~i~p~-~~--~-~---~~~~~~~~~---~~------~~~n~~~~ 257 (373)
T d1v4va_ 198 VTVTMHRRENWPLLSDLAQALKRVAEAFPHLT----FVYPV-HL--N-P---VVREAVFPV---LK------GVRNFVLL 257 (373)
T ss_dssp EEECCCCGGGGGGHHHHHHHHHHHHHHCTTSE----EEEEC-CS--C-H---HHHHHHHHH---HT------TCTTEEEE
T ss_pred eeEEeccccccchHHHHHHHHHHHhhhcccce----eeeee-cc--c-c---cchhhhhhh---hc------ccccceee
Confidence 78888998888888999999999988887653 43332 21 1 1 111222221 11 12357765
Q ss_pred cCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccc-c-cCcEEEC
Q 004314 418 DKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPS-L-SGAIRVN 495 (761)
Q Consensus 418 ~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~-l-~~al~Vn 495 (761)
.+++..+...+++.|++++-.|- -...||.+.+. |+|.=...|-.+. + .|...+-
T Consensus 258 -~~l~~~~~l~ll~~s~~vignSs-----sgi~Ea~~lg~-----------------P~Inir~~~eRqeg~~~g~nvlv 314 (373)
T d1v4va_ 258 -DPLEYGSMAALMRASLLLVTDSG-----GLQEEGAALGV-----------------PVVVLRNVTERPEGLKAGILKLA 314 (373)
T ss_dssp -CCCCHHHHHHHHHTEEEEEESCH-----HHHHHHHHTTC-----------------CEEECSSSCSCHHHHHHTSEEEC
T ss_pred -ccchHHHHHHHhhhceeEecccc-----hhhhcchhhcC-----------------cEEEeCCCccCHHHHhcCeeEEc
Confidence 58999999999999999887663 35669999875 6665544444433 3 2434444
Q ss_pred CCCHHHHHHHHHHHHcCC
Q 004314 496 PWNIEATAEAMHEAIQMN 513 (761)
Q Consensus 496 P~d~~~~A~ai~~aL~m~ 513 (761)
+.|.+++..++.++|..+
T Consensus 315 ~~d~~~I~~~i~~~l~~~ 332 (373)
T d1v4va_ 315 GTDPEGVYRVVKGLLENP 332 (373)
T ss_dssp CSCHHHHHHHHHHHHTCH
T ss_pred CCCHHHHHHHHHHHHcCH
Confidence 559999999999999854
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=94.97 E-value=0.0075 Score=59.24 Aligned_cols=53 Identities=15% Similarity=0.213 Sum_probs=39.1
Q ss_pred cceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEc---CCChhhHHhhcc
Q 004314 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVS---GRGRDCLGKWFS 647 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvS---GR~~~~L~~~f~ 647 (761)
+.|+|+||+||||.+.. .+-+.+.++|++|.+ .+..++++| +|+...+.+.+.
T Consensus 6 ~ik~vlFDlDGTL~~~~----~~i~~a~e~l~~l~~-~g~~~~~~TN~~~~~~~~~~~~~~ 61 (261)
T d1vjra_ 6 KIELFILDMDGTFYLDD----SLLPGSLEFLETLKE-KNKRFVFFTNNSSLGAQDYVRKLR 61 (261)
T ss_dssp GCCEEEECCBTTTEETT----EECTTHHHHHHHHHH-TTCEEEEEESCTTSCHHHHHHHHH
T ss_pred hCCEEEEeCCCeeEECC----ccCchHHHHHHHHHH-cCCCEEEEeCCCCCCHHHHHHHHH
Confidence 57899999999998732 223567889999886 688999997 555666555553
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=94.23 E-value=0.017 Score=53.73 Aligned_cols=47 Identities=26% Similarity=0.270 Sum_probs=37.6
Q ss_pred ceeEEecCCCcCCCCCC-----CCCCCCHHHHHHHHHHHhcCCCeEEEEcCCC
Q 004314 591 SRAILFDYDGTVMPQTS-----INKAPSQAVISIINTLCNDARNTVFVVSGRG 638 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~-----~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR~ 638 (761)
.++||||.||||..... .+-.+-+.+.++|++|.+ .+..++|+|..+
T Consensus 2 ~~Av~~DrDGtl~~~~~y~~~~~~~~~~~gv~e~l~~L~~-~g~~~~ivTNq~ 53 (182)
T d2gmwa1 2 VPAIFLDRDGTINVDHGYVHEIDNFEFIDGVIDAMRELKK-MGFALVVVTNQS 53 (182)
T ss_dssp BCEEEECSBTTTBCCCSSCCSGGGCCBCTTHHHHHHHHHH-TTCEEEEEEECT
T ss_pred CCEEEEeCCCCccCCCCCCCCHHHeeECCCHHHHHHHHhh-cCchhhhhhccc
Confidence 57999999999975432 233456789999999996 689999999987
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=94.16 E-value=0.0089 Score=56.97 Aligned_cols=37 Identities=8% Similarity=0.039 Sum_probs=31.5
Q ss_pred CCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC
Q 004314 612 PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (761)
Q Consensus 612 p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~ 649 (761)
+.+.+.+.|+.|.+ .+..++|+||.....++.++..+
T Consensus 76 l~pg~~~~l~~L~~-~g~~~~ivS~~~~~~i~~~l~~l 112 (226)
T d2feaa1 76 IREGFREFVAFINE-HEIPFYVISGGMDFFVYPLLEGI 112 (226)
T ss_dssp BCTTHHHHHHHHHH-HTCCEEEEEEEEHHHHHHHHTTT
T ss_pred hhHHHHHHHHHHHh-cccccccCCcchhhhHHHHHHHc
Confidence 45788899999986 48899999999999999998764
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=93.67 E-value=0.025 Score=53.45 Aligned_cols=49 Identities=14% Similarity=0.288 Sum_probs=36.5
Q ss_pred hccceeEEecCCCcCCCCCCCCC---------CCCHHHHHHHHHHHhcCCCeEEEEcCC
Q 004314 588 RSKSRAILFDYDGTVMPQTSINK---------APSQAVISIINTLCNDARNTVFVVSGR 637 (761)
Q Consensus 588 ~s~~rlI~lDyDGTL~~~~~~~~---------~p~~~~~~~L~~L~~d~~n~V~IvSGR 637 (761)
+.+.|+++||.||||....+... ...+.+.++|+.|.++ +..++|+|-.
T Consensus 18 ~~~~Kia~fDrDGtLik~~~~~~~~~~~~d~~~l~~~v~~~i~~L~~~-gy~iiIvTNQ 75 (195)
T d1yj5a1 18 KPQGKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQELAAE-GYKLVIFTNQ 75 (195)
T ss_dssp CCCSCEEEECSBTTTEECSSSCSSCSSTTCCEESCTTHHHHHHHHHHH-TCEEEEEEEC
T ss_pred CCcCcEEEEECCCceEeeCCCCcCCCChhhceeccCCHHHHHHHHHhC-CcEEEEecCc
Confidence 44578999999999975432111 1358899999999964 8999999974
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=93.24 E-value=0.015 Score=55.49 Aligned_cols=35 Identities=9% Similarity=0.087 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 614 QAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 614 ~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
+.+.+.|++|++.++..++|+||.....+...+..
T Consensus 94 ~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~ 128 (228)
T d2hcfa1 94 EGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKL 128 (228)
T ss_dssp TTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHT
T ss_pred CchHHHHhhhhccccccccccCCCcchhhhhhhhh
Confidence 56778899998754578899999999988888764
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=92.89 E-value=0.033 Score=54.32 Aligned_cols=52 Identities=19% Similarity=0.278 Sum_probs=38.7
Q ss_pred ceeEEecCCCcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEcC---CChhhHHhhcc
Q 004314 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSG---RGRDCLGKWFS 647 (761)
Q Consensus 591 ~rlI~lDyDGTL~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~IvSG---R~~~~L~~~f~ 647 (761)
.|.|+||+||||.+. ..+-+...++|++|.+ .+..++++|+ |+.+.+.+.+.
T Consensus 2 yk~vlFDlDGTL~~~----~~~i~~a~e~l~~l~~-~g~~~~~~TN~s~~~~~~~~~~l~ 56 (253)
T d1wvia_ 2 YKGYLIDLDGTIYKG----KDRIPAGEDFVKRLQE-RQLPYILVTNNTTRTPEMVQEMLA 56 (253)
T ss_dssp CCEEEEECBTTTEET----TEECHHHHHHHHHHHH-HTCCEEEEECCCSSCHHHHHHHHH
T ss_pred cCEEEEcCcCceEEC----CCcCccHHHHHHHHHH-CCCCEEEEeCCCCCCHHHHHHHHH
Confidence 578999999999873 2244778899999886 4788888875 55556666553
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=92.53 E-value=0.036 Score=52.91 Aligned_cols=47 Identities=26% Similarity=0.297 Sum_probs=36.5
Q ss_pred cceeEEecCCCcCCCCCC-----CCCCCCHHHHHHHHHHHhcCCCeEEEEcCC
Q 004314 590 KSRAILFDYDGTVMPQTS-----INKAPSQAVISIINTLCNDARNTVFVVSGR 637 (761)
Q Consensus 590 ~~rlI~lDyDGTL~~~~~-----~~~~p~~~~~~~L~~L~~d~~n~V~IvSGR 637 (761)
+.++||||.||||..... .+-.+-+.+.++|++|.+ .+..++|+|-+
T Consensus 22 ~~~Aif~DrDGtl~~~~~y~~~~~~~~l~pgv~e~L~~L~~-~G~~l~IvTNQ 73 (209)
T d2o2xa1 22 HLPALFLDRDGTINVDTDYPSDPAEIVLRPQMLPAIATANR-AGIPVVVVTNQ 73 (209)
T ss_dssp SCCCEEECSBTTTBCCCSCTTCGGGCCBCGGGHHHHHHHHH-HTCCEEEEEEC
T ss_pred CCCEEEEeCCCCeECCCCCCCCHHHeEecccHHHHHHHHHh-hCCeEEEeccc
Confidence 467899999999976432 223456789999999997 58999999953
|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Maltodextrin phosphorylase (MALP) species: Escherichia coli [TaxId: 562]
Probab=91.90 E-value=8.2 Score=42.93 Aligned_cols=135 Identities=16% Similarity=0.149 Sum_probs=85.0
Q ss_pred CCCeEEEeecCccccCChHHHHHHHHHH---HHhCCCCc-CceeEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCC
Q 004314 334 EGKTVLLGVDDMDIFKGVDLKLLAMEHL---LKQHPKWQ-GRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRP 409 (761)
Q Consensus 334 ~~~~vil~VdRld~~KGi~~~l~A~~~l---l~~~P~~~-~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~in~~~g~~ 409 (761)
++...+.++-|+..-|--.+.+.-.+++ ++..|+.. ..+++|..|-+..++. .-.++-+.+.++++.+|..=-..
T Consensus 524 p~~LtigfaRRfa~YKR~~L~~~~i~~l~~~l~~~~~~~~~Pvq~IfaGKAhP~d~-~gK~iIk~I~~va~~in~dp~~~ 602 (796)
T d1l5wa_ 524 PQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYY-LAKNIIFAINKVADVINNDPLVG 602 (796)
T ss_dssp TTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCH-HHHHHHHHHHHHHHHHHTCTTTG
T ss_pred hhhccchhhhhhhhhhcccchhhhHHHHHHHHhcCcccCCCceEEEEcCCCCCchH-HHHHHHHHHHHHHHHhcCChhhc
Confidence 4667889999999999988876665554 34454422 2466665554433332 22455566777777777420000
Q ss_pred CCccEEEEcCCCCHHHHHHHHHhcccceecccc--cCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCCccc
Q 004314 410 GYEPVVFIDKPVTLSERAAYYTIAECVVVTAVR--DGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPS 487 (761)
Q Consensus 410 ~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~--EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~ 487 (761)
+.-.|+|+. ..+-+--..+..++||-+.+|.+ |.=|..-+-|+. .|++.+|..-|.--+
T Consensus 603 ~~~kVVFle-nYdv~lA~~lv~g~DVwln~p~~p~EASGTSgMKaal------------------NG~lnlstlDGw~vE 663 (796)
T d1l5wa_ 603 DKLKVVFLP-DYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLAL------------------NGALTVGTLDGANVE 663 (796)
T ss_dssp GGEEEEECS-SCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHH------------------TTCEEEECSCTTHHH
T ss_pred cceeEEEeC-CCchHHHHHHhcccchhhhCCCCCcccCCchHHHHHH------------------cCCeeeecccchHHH
Confidence 122588775 56777778899999999999973 433333333333 468999998897544
Q ss_pred c
Q 004314 488 L 488 (761)
Q Consensus 488 l 488 (761)
.
T Consensus 664 ~ 664 (796)
T d1l5wa_ 664 I 664 (796)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.64 E-value=0.053 Score=51.62 Aligned_cols=36 Identities=19% Similarity=0.254 Sum_probs=30.2
Q ss_pred CCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 612 PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 612 p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
+.+.+.++|+.|.+ .+..++|+||-....++.++..
T Consensus 83 l~pg~~~~i~~lk~-~G~~~~ivS~~~~~~v~~i~~~ 118 (217)
T d1nnla_ 83 LTPGIRELVSRLQE-RNVQVFLISGGFRSIVEHVASK 118 (217)
T ss_dssp BCTTHHHHHHHHHH-TTCEEEEEEEEEHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHh-CCCEEEEECCCchHHHHHHHHH
Confidence 45888899999997 5899999999998888777654
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=91.64 E-value=0.043 Score=51.46 Aligned_cols=35 Identities=11% Similarity=0.107 Sum_probs=29.3
Q ss_pred CHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 613 SQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 613 ~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
-+.+.+.|..|.+ .+..++|+||.+...++..+..
T Consensus 97 ~~~~~~~L~~L~~-~g~~~~i~tn~~~~~~~~~l~~ 131 (224)
T d2hsza1 97 YPNVKETLEALKA-QGYILAVVTNKPTKHVQPILTA 131 (224)
T ss_dssp CTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-cCCcccccccccHHHHHHHHHh
Confidence 4677899999986 5899999999999988877754
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=90.82 E-value=0.038 Score=51.61 Aligned_cols=36 Identities=14% Similarity=0.136 Sum_probs=29.4
Q ss_pred CCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC
Q 004314 612 PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (761)
Q Consensus 612 p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~ 649 (761)
+-+.+.++|+.|.+ +..++|+|+.....+...+...
T Consensus 83 ~~~g~~~~L~~l~~--~~~~~ivT~~~~~~~~~~l~~~ 118 (207)
T d2hdoa1 83 LYPGITSLFEQLPS--ELRLGIVTSQRRNELESGMRSY 118 (207)
T ss_dssp ECTTHHHHHHHSCT--TSEEEEECSSCHHHHHHHHTTS
T ss_pred cccchhhhhhhhcc--cccccccccccccccccccccc
Confidence 34678899999864 6899999999999998888754
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=90.06 E-value=0.088 Score=49.20 Aligned_cols=35 Identities=14% Similarity=-0.051 Sum_probs=29.3
Q ss_pred CHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 613 SQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 613 ~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
-+.+.++|++|.+ .+..++|+||.+...+...+..
T Consensus 90 ~pg~~~~l~~L~~-~g~~~~i~T~~~~~~~~~~l~~ 124 (218)
T d1te2a_ 90 LPGVREAVALCKE-QGLLVGLASASPLHMLEKVLTM 124 (218)
T ss_dssp CTTHHHHHHHHHH-TTCEEEEEESSCHHHHHHHHHH
T ss_pred cchHHHHHHHhhh-cccccccccccccccccccccc
Confidence 3678899999986 5899999999999988777753
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=89.34 E-value=0.21 Score=47.94 Aligned_cols=33 Identities=15% Similarity=0.143 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhcc
Q 004314 614 QAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (761)
Q Consensus 614 ~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~ 647 (761)
+.+.++|+.|.+ .+..++|+||.+...++..+.
T Consensus 102 ~g~~~~L~~Lk~-~g~~i~i~Tn~~~~~~~~~l~ 134 (257)
T d1swva_ 102 NGVKEVIASLRE-RGIKIGSTTGYTREMMDIVAK 134 (257)
T ss_dssp TTHHHHHHHHHH-TTCEEEEBCSSCHHHHHHHHH
T ss_pred CcHHHHHHHHHh-cccceeecCCCchhhHHHHHH
Confidence 445567888886 488999999999887776654
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=89.29 E-value=0.11 Score=47.57 Aligned_cols=34 Identities=21% Similarity=0.312 Sum_probs=26.4
Q ss_pred CCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhcc
Q 004314 612 PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (761)
Q Consensus 612 p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~ 647 (761)
+-+.+.++|++|++ .+..++|+|+.+...++ .+.
T Consensus 80 ~~~gv~~~l~~l~~-~g~~~~i~Sn~~~~~~~-~l~ 113 (187)
T d2fi1a1 80 LFEGVSDLLEDISN-QGGRHFLVSHRNDQVLE-ILE 113 (187)
T ss_dssp BCTTHHHHHHHHHH-TTCEEEEECSSCTHHHH-HHH
T ss_pred ccchhHHHHHHHHh-hhccccccccCccchhh-hhh
Confidence 34678999999997 58999999998776554 454
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=88.99 E-value=0.25 Score=49.65 Aligned_cols=101 Identities=12% Similarity=0.096 Sum_probs=63.7
Q ss_pred EcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCCC--------cccc
Q 004314 417 IDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGC--------SPSL 488 (761)
Q Consensus 417 ~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~--------~~~l 488 (761)
+.+.+++.+ ++..+|+||..+ |.| +..|+++||. |+|+.-+.+- ++.+
T Consensus 274 i~~~~p~~~---ll~~a~~~v~hg---G~~-t~~Eal~~G~-----------------P~v~~P~~~d~~~eQ~~nA~~l 329 (391)
T d1pn3a_ 274 VVGEVNLQE---LFGRVAAAIHHD---SAG-TTLLAMRAGI-----------------PQIVVRRVVDNVVEQAYHADRV 329 (391)
T ss_dssp EESSCCHHH---HHTTSSCEEEES---CHH-HHHHHHHHTC-----------------CEEEECSSCCBTTBCCHHHHHH
T ss_pred EecccCHHH---HHhhccEEEecC---chH-HHHHHHHhCC-----------------cEEEeccccCCcchHHHHHHHH
Confidence 445777655 567899998664 444 6789999986 6776655542 2333
Q ss_pred ---cCcEEECCCC--HHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHHHHHHHH
Q 004314 489 ---SGAIRVNPWN--IEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDM 544 (761)
Q Consensus 489 ---~~al~VnP~d--~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~~l~~l 544 (761)
..|+.+++.+ .++++++|.++|+.. -++|.+++.+.++...+..=++.+.+.|
T Consensus 330 ~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~---~r~~a~~~a~~~~~~g~~~aa~~i~~~l 387 (391)
T d1pn3a_ 330 AELGVGVAVDGPVPTIDSLSAALDTALAPE---IRARATTVADTIRADGTTVAAQLLFDAV 387 (391)
T ss_dssp HHHTSEEEECCSSCCHHHHHHHHHHHTSTT---HHHHHHHHGGGSCSCHHHHHHHHHHHHH
T ss_pred HHCCCEEEcCcCCCCHHHHHHHHHHHhCHH---HHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 2377787654 899999999999632 3445555555565544444344333333
|
| >d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5'(3')-deoxyribonucleotidase (dNT-2) domain: 5'(3')-deoxyribonucleotidase (dNT-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.72 E-value=0.13 Score=47.83 Aligned_cols=30 Identities=10% Similarity=0.254 Sum_probs=22.8
Q ss_pred CCCHHHHHHHHHHHhcCCCeEEEEcCCChh
Q 004314 611 APSQAVISIINTLCNDARNTVFVVSGRGRD 640 (761)
Q Consensus 611 ~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~ 640 (761)
.|-+..+++|++|.+.....|+|+|.|...
T Consensus 74 ~p~~gA~e~l~~L~~~~~~~v~i~t~~~~~ 103 (195)
T d1q92a_ 74 EPLPGAVEAVKEMASLQNTDVFICTSPIKM 103 (195)
T ss_dssp CBCTTHHHHHHHHHHSTTEEEEEEECCCSC
T ss_pred CcccCHHHHHHHHhhccCccceEEcccccc
Confidence 355788999999997555578888888743
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=88.42 E-value=0.3 Score=45.65 Aligned_cols=34 Identities=15% Similarity=0.207 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccC
Q 004314 614 QAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (761)
Q Consensus 614 ~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~ 648 (761)
+.+.+.|++|.+ .+..++|+|+.+.......+..
T Consensus 130 pg~~e~l~~L~~-~g~~l~i~Tn~~~~~~~~~~~~ 163 (253)
T d1zs9a1 130 ADVVPAVRKWRE-AGMKVYIYSSGSVEAQKLLFGH 163 (253)
T ss_dssp TTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHT
T ss_pred CCHHHHHHHHhh-ccCceeecCCCcHHHHHHHHHH
Confidence 456788899875 6899999999999988777654
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=88.10 E-value=0.11 Score=49.13 Aligned_cols=63 Identities=22% Similarity=0.346 Sum_probs=50.4
Q ss_pred CCHHHHHHHHHhccceeEEecCCCcCCCCCC-------------------------------CCCCCCHHHHHHHHHHHh
Q 004314 577 LSIDAIVSAYLRSKSRAILFDYDGTVMPQTS-------------------------------INKAPSQAVISIINTLCN 625 (761)
Q Consensus 577 l~~~~i~~~y~~s~~rlI~lDyDGTL~~~~~-------------------------------~~~~p~~~~~~~L~~L~~ 625 (761)
.++.+|.+.++..+...|+||+|-|++...+ ..+.|-+.+++.|+.+.+
T Consensus 21 ~~~~~i~~~~~g~~P~AIifDIDETvLdnspy~~~~~~~~~~~~~~y~~~~~~W~~~~~~~~~~A~p~pga~~fl~~~~~ 100 (209)
T d2b82a1 21 VSVAQIENSLAGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVR 100 (209)
T ss_dssp ECHHHHHHHTTTCCCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHH
T ss_pred EEHHHHHHhcCCCCCceEEEcchhhhhcCcHHHHhhhhhcCcCcccccCCCcchHHHhcccccccCcchhHHHHHHHHHH
Confidence 5678888988887777999999999997421 013456789999999987
Q ss_pred cCCCeEEEEcCCChh
Q 004314 626 DARNTVFVVSGRGRD 640 (761)
Q Consensus 626 d~~n~V~IvSGR~~~ 640 (761)
.|..|+.+|||...
T Consensus 101 -~Gv~IfyVTnR~~~ 114 (209)
T d2b82a1 101 -RGDAIFFVTGRSPT 114 (209)
T ss_dssp -HTCEEEEEECSCCC
T ss_pred -cCCeEEEEeCCchh
Confidence 59999999999864
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=87.34 E-value=0.099 Score=47.96 Aligned_cols=35 Identities=29% Similarity=0.215 Sum_probs=23.4
Q ss_pred CCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhcc
Q 004314 612 PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (761)
Q Consensus 612 p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~ 647 (761)
+.+.+.+.++.|.. .+..++++||.........+.
T Consensus 76 ~~~~~~~~i~~l~~-~~~~~~~~~~~~~~~~~~~~~ 110 (210)
T d1j97a_ 76 PTEGAEETIKELKN-RGYVVAVVSGGFDIAVNKIKE 110 (210)
T ss_dssp BCTTHHHHHHHHHH-TTCEEEEEEEEEHHHHHHHHH
T ss_pred hhhhHHHHHHHHHH-cCCEEEeecccccccccchhh
Confidence 44566677777775 467777888777666655554
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=85.45 E-value=0.18 Score=46.44 Aligned_cols=28 Identities=7% Similarity=0.152 Sum_probs=23.0
Q ss_pred CHHHHHHHHHHHhcCCCeEEEEcCCChhh
Q 004314 613 SQAVISIINTLCNDARNTVFVVSGRGRDC 641 (761)
Q Consensus 613 ~~~~~~~L~~L~~d~~n~V~IvSGR~~~~ 641 (761)
-+.+.++|+.|.+ .+..++|+|++....
T Consensus 84 ~pgv~~~L~~L~~-~g~~~~v~Sn~~~~~ 111 (204)
T d2go7a1 84 MPGAREVLAWADE-SGIQQFIYTHKGNNA 111 (204)
T ss_dssp CTTHHHHHHHHHH-TTCEEEEECSSCTHH
T ss_pred cchHHhhhhcccc-cccchhhhcccchhh
Confidence 4678899999986 589999999987653
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=85.14 E-value=0.66 Score=46.29 Aligned_cols=91 Identities=10% Similarity=0.030 Sum_probs=58.7
Q ss_pred EEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCC----Ccccc-
Q 004314 414 VVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIG----CSPSL- 488 (761)
Q Consensus 414 V~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~~~l- 488 (761)
|+ +.+.+++. ++|..+|++|. -|-.-+..|++++|. |+|+--+.+ .+..+
T Consensus 287 v~-~~~~~p~~---~~l~~~~~~V~----hgG~~t~~Eal~~Gv-----------------P~v~~P~~~DQ~~na~~l~ 341 (401)
T d1iira_ 287 CF-AIGEVNHQ---VLFGRVAAVIH----HGGAGTTHVAARAGA-----------------PQILLPQMADQPYYAGRVA 341 (401)
T ss_dssp EE-ECSSCCHH---HHGGGSSEEEE----CCCHHHHHHHHHHTC-----------------CEEECCCSTTHHHHHHHHH
T ss_pred EE-EEeccCHH---HHHhhcCEEEe----cCCchHHHHHHHhCC-----------------CEEEccccccHHHHHHHHH
Confidence 54 44577765 45677999883 455567789999986 666644444 22233
Q ss_pred --cCcEEECCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCC
Q 004314 489 --SGAIRVNPW--NIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHD 532 (761)
Q Consensus 489 --~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~ 532 (761)
+.|+.+++. +++++++||.++|+ + +-++|.+++.+.+++-.
T Consensus 342 ~~G~g~~l~~~~~~~~~l~~ai~~~l~--~-~~~~~a~~~~~~~~~~~ 386 (401)
T d1iira_ 342 ELGVGVAHDGPIPTFDSLSAALATALT--P-ETHARATAVAGTIRTDG 386 (401)
T ss_dssp HHTSEEECSSSSCCHHHHHHHHHHHTS--H-HHHHHHHHHHHHSCSCH
T ss_pred HCCCEEEcCcCCCCHHHHHHHHHHHhC--H-HHHHHHHHHHHHHHhcC
Confidence 237778775 68999999999995 3 33445555555555433
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=84.20 E-value=0.42 Score=48.10 Aligned_cols=98 Identities=14% Similarity=0.018 Sum_probs=63.7
Q ss_pred cEEEEcCCCCHHHHHHHHHhcccceecccccCCCcchhhheeeecCCCCCCCCCCCCCCCCceEEEcCCCC----Ccccc
Q 004314 413 PVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIG----CSPSL 488 (761)
Q Consensus 413 pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~~~l 488 (761)
.|. +.+.+|+.++ +..+|+||. -|-.-+..|++++|. |+|+.-+.+ .+..+
T Consensus 287 ~v~-~~~~~p~~~l---l~~~~~~I~----hgG~~t~~Eal~~Gv-----------------P~l~~P~~~DQ~~na~~v 341 (401)
T d1rrva_ 287 DCF-AIDEVNFQAL---FRRVAAVIH----HGSAGTEHVATRAGV-----------------PQLVIPRNTDQPYFAGRV 341 (401)
T ss_dssp TEE-EESSCCHHHH---GGGSSEEEE----CCCHHHHHHHHHHTC-----------------CEEECCCSBTHHHHHHHH
T ss_pred CEE-EEeccCcHHH---hhhccEEEe----cCCchHHHHHHHhCC-----------------CEEEecccccHHHHHHHH
Confidence 355 4457886654 567998884 444457789999986 666655554 23333
Q ss_pred ---cCcEEECCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhHHhhCCHHHHHH
Q 004314 489 ---SGAIRVNPW--NIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWAR 538 (761)
Q Consensus 489 ---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~ 538 (761)
+-|+.+++. +.+.++++|.++|+ + +.++|.++..+.++...+..=++
T Consensus 342 ~~~G~g~~l~~~~~~~~~L~~ai~~vl~--~-~~r~~a~~~~~~~~~~g~~~aa~ 393 (401)
T d1rrva_ 342 AALGIGVAHDGPTPTFESLSAALTTVLA--P-ETRARAEAVAGMVLTDGAAAAAD 393 (401)
T ss_dssp HHHTSEEECSSSCCCHHHHHHHHHHHTS--H-HHHHHHHHHTTTCCCCHHHHHHH
T ss_pred HHCCCEEEcCcCCCCHHHHHHHHHHHhC--H-HHHHHHHHHHHHHhhcCHHHHHH
Confidence 237788775 48999999999985 3 44555666666665544444333
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| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=83.15 E-value=0.32 Score=44.76 Aligned_cols=60 Identities=22% Similarity=0.176 Sum_probs=41.4
Q ss_pred ccceeEEecCCCcCCCCC----CCC---CCCCHHHHHHHHHHHhcCCCeEEEEcCCChhhHHhhccCC
Q 004314 589 SKSRAILFDYDGTVMPQT----SIN---KAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (761)
Q Consensus 589 s~~rlI~lDyDGTL~~~~----~~~---~~p~~~~~~~L~~L~~d~~n~V~IvSGR~~~~L~~~f~~~ 649 (761)
.+.|+|++|+||+|++.. ... +.-+..=-..+..|.+ .+..++++||+...........+
T Consensus 3 ~~ik~~i~DvDGVlTDG~v~~~~dG~e~k~F~~~Dg~gi~~l~~-~gi~~~iis~~~~~~v~~~~~~l 69 (177)
T d1k1ea_ 3 ENIKFVITDVDGVLTDGQLHYDANGEAIKSFHVRDGLGIKMLMD-ADIQVAVLSGRDSPILRRRIADL 69 (177)
T ss_dssp GGCCEEEEECTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHH-TTCEEEEEESCCCHHHHHHHHHH
T ss_pred ccCeEEEEccCCcccCCeEEEeCCCCEEEEEECcchHHHHHHhh-hcEEEEEecCCchhHHHHHHhhh
Confidence 467999999999999632 111 1111122235667775 68999999999999988887654
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